BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007461
(603 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225425981|ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 603
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/615 (62%), Positives = 485/615 (78%), Gaps = 26/615 (4%)
Query: 3 MAISSSSDCSSALINTTYTCMKKSYRHTLFSTCKAFPFVTVNPSSIINHRFFQVNAST-- 60
MA+S+S I+T+ + T STCK P ++ P S N R+ VN S+
Sbjct: 1 MAVSTS-------ISTSNCRQPHKLKLTFTSTCKLLPIFSL-PCS--NSRYLFVNNSSYS 50
Query: 61 ------------NFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAK 108
+ P IEL D P + + FL G+ +DP+++ELA+DYY + K
Sbjct: 51 SPIVAEESTHDHHLPVIEL--DVELPDLTPKDENLNDFLCGLFRDPRSEELAFDYYQKVK 108
Query: 109 KLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKF 168
+ PEFRP+K TL+ +IRYL++SKKW + + EDFK ++ D C RL++SC+RARKF
Sbjct: 109 ERPEFRPDKETLERIIRYLIRSKKWGLSLLVFEDFKSFDAQLDGDICCRLISSCIRARKF 168
Query: 169 KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
+I +LL+VF + ++ALL FNSAMGGYNKLHM+ STI VY++MKSAG+V +S Y +IM
Sbjct: 169 RITESLLEVFSYNDDVALLVFNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIM 228
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
EAY KI D EKV LF E +SRK+DS+PFST +Y+ILC+SLGK GRAFEAL+FFRDM +K
Sbjct: 229 EAYIKIRDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKK 288
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GILED ++Y+SLICSFASI EVK+AEELF+EAEEK +LRDPEV LKLVLMY+EEGL+E+T
Sbjct: 289 GILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERT 348
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
L++V++MKN ++++SDCI CAIVNGF+K+RG AA KVY++LI QGC PGQVTYASIIN
Sbjct: 349 LEIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINV 408
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
YCR+ LYSKAE VF EM++KGF+KCVVAYSSMV MYGKTGR+R+AM LVAKMK +GCEPN
Sbjct: 409 YCRMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCEPN 468
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
VW+YNSLMDMHGR KNLRQVEKLWKEM+R+KV PD+VSYT+VISAY++A +F+ C++FY+
Sbjct: 469 VWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYH 528
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
EFRMNGGVIDR IAGIMVG+FSK +++ELVKLLQDMK+EGT LDERLY SA+NALRDAG
Sbjct: 529 EFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDERLYRSALNALRDAG 588
Query: 589 LQMQAQWLQQNFEGT 603
LQMQA+WLQ++F+ T
Sbjct: 589 LQMQARWLQESFDTT 603
>gi|359484961|ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 609
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/612 (62%), Positives = 484/612 (79%), Gaps = 23/612 (3%)
Query: 3 MAISSSSDCSSALINTTYTCMKKSYRHTLFSTCKAFPFVTVNPSSIINHRFFQVNASTNF 62
MA+S+S I+T+ + T STCK P ++ P S N R+ VN S+
Sbjct: 1 MAVSTS-------ISTSNCRQPHRLKLTFTSTCKLLPIFSL-PCS--NSRYLFVNNSSYS 50
Query: 63 PTI---ELNRDSHHQTAV----------PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKK 109
I E D HH + P + + FL G+ +DP+++ELA+DYY + K+
Sbjct: 51 SPIVAEESTHDHHHLPVIELDVELPDLTPKDENLNDFLCGLFRDPRSEELAFDYYQKVKE 110
Query: 110 LPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFK 169
PEFRP+K TL+ +IRYL++SKKW + + EDFK ++V D C RL++SC+RARKF+
Sbjct: 111 RPEFRPDKETLERIIRYLIRSKKWGLSLLVFEDFKSFDVQLDGDICCRLISSCIRARKFR 170
Query: 170 IANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
I +LL+VF + ++ALL NSAMGGYNKLHM+ STI VY++MKSAG+V +S Y +IME
Sbjct: 171 ITESLLEVFSYNDDVALLVCNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIME 230
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY KI D EKV LF E +SRK+DS+PFST +Y+ILC+SLGK GRAFEAL+FFRDM +KG
Sbjct: 231 AYIKIRDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKG 290
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
ILED ++Y+SLICSFASI EVK+AEELF+EAEEK +LRDPEV LKLVLMY+EEGL+E+T+
Sbjct: 291 ILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTI 350
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
++V++MKN K+++SDCI CAIVNGF+K+RG AA KVY++LI QGC PGQVTYASIIN Y
Sbjct: 351 EIVKAMKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVY 410
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
CR+ LYSKAE +F EM++KGF+KCVVAYSSMV MYGKTGR+R+AM LVAKMK +GC+PNV
Sbjct: 411 CRMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCKPNV 470
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
W+YNSLMDMHGR KNLRQVEKLWKEM+R+KV PD+VSYT+VISAY++A +F+ C++FY+E
Sbjct: 471 WVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHE 530
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
FRMNGGVIDR IAGIMVG+FSK +++ELVKLLQDMK+EGT LDERLY SA+NALRDAGL
Sbjct: 531 FRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDERLYRSALNALRDAGL 590
Query: 590 QMQAQWLQQNFE 601
QMQA+WLQ++F+
Sbjct: 591 QMQARWLQESFD 602
>gi|224108157|ref|XP_002314741.1| predicted protein [Populus trichocarpa]
gi|222863781|gb|EEF00912.1| predicted protein [Populus trichocarpa]
Length = 525
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/527 (70%), Positives = 453/527 (85%), Gaps = 4/527 (0%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD K + FL G+L+DP+++ELAY+YY +AK+ PEFRP++ LKLLIRYL+QS KW ++
Sbjct: 1 PD--KLNDFLCGVLQDPKSEELAYEYYKKAKEKPEFRPQRPVLKLLIRYLIQSDKWGLVL 58
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
SL++DFK YNV PD+ T S LV+SC+RAR+FKI LL+ F +D +IA+LAF+SAM GYN
Sbjct: 59 SLADDFKKYNVFPDSFTFSTLVSSCIRARRFKIVENLLENFKSDSKIAVLAFDSAMKGYN 118
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
KLHMY STI V+EKM AGI LDS CYCQIM+AYYK+GD+EKV ALF E +SRKLDS P
Sbjct: 119 KLHMYGSTISVHEKMILAGIPLDSRCYCQIMKAYYKLGDAEKVVALFNEFESRKLDSKPM 178
Query: 258 S-THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
++KILC SLG+SG+AF+AL++ RDM++KGILED SIY+SLICSFA+I EV++AEEL
Sbjct: 179 ILRQIFKILCLSLGRSGQAFQALEYSRDMRKKGILEDSSIYSSLICSFANIREVEVAEEL 238
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN-AKLKISDCISCAIVNGFS 375
FKEA EK MLRDPE+ L+LVLMYIEEG +EKT+++V+ MK A LK+SDCI CAIVNGFS
Sbjct: 239 FKEALEKRMLRDPEIVLRLVLMYIEEGQMEKTIEIVKVMKGTANLKVSDCIFCAIVNGFS 298
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
KRRG+ AAVKVYE+L GC PGQVTYAS+INAYCR LYSKAE VF EM++KGFDKCVV
Sbjct: 299 KRRGFSAAVKVYEELKYDGCDPGQVTYASVINAYCRAGLYSKAEMVFSEMEEKGFDKCVV 358
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
AYSSM++MYGKTGR RDA LVAKMK KGCEPNVWIYNSL+DMHGRAKNLRQVEKLWKEM
Sbjct: 359 AYSSMISMYGKTGRARDATRLVAKMKLKGCEPNVWIYNSLLDMHGRAKNLRQVEKLWKEM 418
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+RRKV PDKV+Y++VISAYN+++E++MCV++Y+E+R+NGGVID A+AGIM GVFSK+S+I
Sbjct: 419 KRRKVAPDKVTYSSVISAYNKSKEYEMCVRYYHEYRINGGVIDGAMAGIMAGVFSKISRI 478
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+ELVKLL+DMKSEGT +DERLY SA NA+RDAGL +QA+WLQ +F+
Sbjct: 479 DELVKLLRDMKSEGTPIDERLYRSATNAMRDAGLDIQAKWLQDSFKA 525
>gi|297738294|emb|CBI27495.3| unnamed protein product [Vitis vinifera]
Length = 552
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/543 (64%), Positives = 438/543 (80%), Gaps = 34/543 (6%)
Query: 61 NFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTL 120
+ P IEL D P + + FL G+ +DP+++ELA+DYY + K+ PEFRP+K TL
Sbjct: 33 HLPVIEL--DVELPDLTPKDENLNDFLCGLFRDPRSEELAFDYYQKVKERPEFRPDKETL 90
Query: 121 KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
+ +IR L++SC+RARKF+I +LL+VF
Sbjct: 91 ERIIR--------------------------------LISSCIRARKFRITESLLEVFSY 118
Query: 181 DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
+ ++ALL FNSAMGGYNKLHM+ STI VY++MKSAG+V +S Y +IMEAY KI D EKV
Sbjct: 119 NDDVALLVFNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKV 178
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
LF E +SRK+DS+PFST +Y+ILC+SLGK GRAFEAL+FFRDM +KGILED ++Y+SL
Sbjct: 179 VTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSL 238
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
ICSFASI EVK+AEELF+EAEEK +LRDPEV LKLVLMY+EEGL+E+TL++V++MKN ++
Sbjct: 239 ICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTLEIVKAMKNVEI 298
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
++SDCI CAIVNGF+K+RG AA KVY++LI QGC PGQVTYASIIN YCR+ LYSKAE
Sbjct: 299 RVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEM 358
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
VF EM++KGF+KCVVAYSSMV MYGKTGR+R+AM LVAKMK +GCEPNVW+YNSLMDMHG
Sbjct: 359 VFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCEPNVWVYNSLMDMHG 418
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
R KNLRQVEKLWKEM+R+KV PD+VSYT+VISAY++A +F+ C++FY+EFRMNGGVIDR
Sbjct: 419 RVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEFRMNGGVIDRV 478
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
IAGIMVG+FSK +++ELVKLLQDMK+EGT LDERLY SA+NALRDAGLQMQA+WLQ++F
Sbjct: 479 IAGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQARWLQESF 538
Query: 601 EGT 603
+ T
Sbjct: 539 DTT 541
>gi|449530158|ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/613 (58%), Positives = 468/613 (76%), Gaps = 23/613 (3%)
Query: 3 MAISSSSDCSSALINTTYTCMKKSYRHTLFSTCKAFPFVTVNPSSIINHRFFQVNAS--- 59
MA+S S DCS N S+R + F + F + P+S N +N+S
Sbjct: 1 MALSPSPDCSFPPSN--------SFRKSHFISTSNFSLLFSLPTS--NLPSLHLNSSGCP 50
Query: 60 --------TNFPTIELNRDSH--HQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKK 109
P I N + H ++P+ + + FL G+ ++P T++L YDYY +AK+
Sbjct: 51 SPILEQPSIALPDIHSNSNLHDFQLPSLPNVQDLNDFLCGLSQNPGTEDLIYDYYVKAKE 110
Query: 110 LPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFK 169
FRP+KSTL+ LIRYLV+ KKWD I+ +S DF + V PD TCS+LV+SCVR RKFK
Sbjct: 111 TAGFRPQKSTLRHLIRYLVRLKKWDLILLVSRDFVDFGVCPDRDTCSKLVSSCVRGRKFK 170
Query: 170 IANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
+ +LL+VF + +A+ AF +AM GYNKLHM+ STI+V++++KSA I DSGCYC++ME
Sbjct: 171 VVKSLLEVFERNSGVAMTAFEAAMRGYNKLHMHKSTIMVFQRLKSARIEADSGCYCRVME 230
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY K+GDSE+V LF E +SR DSTPFST +Y ILC+SL KSGR FE+L+FFRDM++KG
Sbjct: 231 AYLKLGDSERVMELFNEVESRISDSTPFSTKIYGILCESLAKSGRVFESLEFFRDMRKKG 290
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
I ED +IY++LIC+FASI EVKLAE+L+ EA+ K +LRDP + LKL+LMY+++G +EK L
Sbjct: 291 IAEDYTIYSALICTFASIQEVKLAEDLYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKAL 350
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
++VE MK+ K+ +SDCI CAIVNG++ RRGY AAVKVYE+LI GC PGQVTYAS INAY
Sbjct: 351 EIVEVMKDFKIGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAY 410
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
CR+ LYSKAE +F EM++KGFDKCVVAYSS+++MYGKTGR++DAM L+AKMK KGC+PNV
Sbjct: 411 CRVGLYSKAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNV 470
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
WIYN LM+MHG+AKNL+QVEKLWKEM+R+K+ PDKVSYT++ISAY +A EF+ C ++Y E
Sbjct: 471 WIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFEKCEQYYRE 530
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
FRMNGG ID+A GIMVGVFSK S+++ELVKLL+DMK EGT+LDERLY +A+NAL DAGL
Sbjct: 531 FRMNGGTIDKAFGGIMVGVFSKTSRVDELVKLLRDMKLEGTRLDERLYRTALNALMDAGL 590
Query: 590 QMQAQWLQQNFEG 602
Q+QA+WLQ ++ G
Sbjct: 591 QVQAKWLQDHYAG 603
>gi|449466949|ref|XP_004151188.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/613 (58%), Positives = 467/613 (76%), Gaps = 23/613 (3%)
Query: 3 MAISSSSDCSSALINTTYTCMKKSYRHTLFSTCKAFPFVTVNPSSIINHRFFQVNAS--- 59
MA+S S DCS N S+R + F + F + P+S N +N+S
Sbjct: 1 MALSPSPDCSFPPSN--------SFRKSHFISTSNFSLLFSLPTS--NLPSLHLNSSGCP 50
Query: 60 --------TNFPTIELNRDSH--HQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKK 109
P I N + H ++P+ + + FL G+ ++P T++L YDYY +AK+
Sbjct: 51 SPILEQPSIALPDIHSNSNLHDFQLPSLPNVQDLNDFLCGLSQNPGTEDLIYDYYVKAKE 110
Query: 110 LPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFK 169
FRP+KSTL+ LIRYLV+ KKWD I+ +S DF + V PD TCS+LV+SCVR RKFK
Sbjct: 111 TAGFRPQKSTLRHLIRYLVRLKKWDLILLVSRDFVDFGVCPDRDTCSKLVSSCVRGRKFK 170
Query: 170 IANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
+ +LL+VF D +A+ AF +AM GYNKLHM+ STI+V++++KSA I DSGCYC++ME
Sbjct: 171 VVKSLLEVFERDSGVAMTAFEAAMRGYNKLHMHKSTIMVFQRLKSARIEADSGCYCRVME 230
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY K+GDSE+V LF E +SR STPFST +Y ILC+SL KSGR FE+L+FFRDM++KG
Sbjct: 231 AYLKLGDSERVMELFNEVESRISVSTPFSTKIYGILCESLAKSGRVFESLEFFRDMRKKG 290
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
I ED +IY++LIC+FASI EVKLAE+L+ EA+ K +LRDP + LKL+LMY+++G +EK L
Sbjct: 291 IAEDYTIYSALICTFASIQEVKLAEDLYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKAL 350
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
++VE MK+ K+ +SDCI CAIVNG++ RRGY AAVKVYE+LI GC PGQVTYAS INAY
Sbjct: 351 EIVEVMKDFKIGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAY 410
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
CR+ LYSKAE +F EM++KGFDKCVVAYSS+++MYGKTGR++DAM L+AKMK KGC+PNV
Sbjct: 411 CRVGLYSKAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNV 470
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
WIYN LM+MHG+AKNL+QVEKLWKEM+R+K+ PDKVSYT++ISAY +A EF+ C ++Y E
Sbjct: 471 WIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFEKCEQYYRE 530
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
FRMNGG ID+A GIMVGVFSK S+++ELVKLL+DMK EGT+LDERLY +A+NAL DAGL
Sbjct: 531 FRMNGGTIDKAFGGIMVGVFSKTSRVDELVKLLRDMKLEGTRLDERLYRTALNALMDAGL 590
Query: 590 QMQAQWLQQNFEG 602
Q+QA+WLQ ++ G
Sbjct: 591 QVQAKWLQDHYAG 603
>gi|297736068|emb|CBI24106.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/541 (64%), Positives = 436/541 (80%), Gaps = 34/541 (6%)
Query: 61 NFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTL 120
+ P IEL D P + + FL G+ +DP+++ELA+DYY + K+ PEFRP+K TL
Sbjct: 19 HLPVIEL--DVELPDLTPKDENLNDFLCGLFRDPRSEELAFDYYQKVKERPEFRPDKETL 76
Query: 121 KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
+ +IR L++SC+RARKF+I +LL+VF
Sbjct: 77 ERIIR--------------------------------LISSCIRARKFRITESLLEVFSY 104
Query: 181 DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
+ ++ALL NSAMGGYNKLHM+ STI VY++MKSAG+V +S Y +IMEAY KI D EKV
Sbjct: 105 NDDVALLVCNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKV 164
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
LF E +SRK+DS+PFST +Y+ILC+SLGK GRAFEAL+FFRDM +KGILED ++Y+SL
Sbjct: 165 VTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSL 224
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
ICSFASI EVK+AEELF+EAEEK +LRDPEV LKLVLMY+EEGL+E+T+++V++MKN K+
Sbjct: 225 ICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTIEIVKAMKNVKI 284
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
++SDCI CAIVNGF+K+RG AA KVY++LI QGC PGQVTYASIIN YCR+ LYSKAE
Sbjct: 285 RVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEM 344
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+F EM++KGF+KCVVAYSSMV MYGKTGR+R+AM LVAKMK +GC+PNVW+YNSLMDMHG
Sbjct: 345 MFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCKPNVWVYNSLMDMHG 404
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
R KNLRQVEKLWKEM+R+KV PD+VSYT+VISAY++A +F+ C++FY+EFRMNGGVIDR
Sbjct: 405 RVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEFRMNGGVIDRV 464
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
IAGIMVG+FSK +++ELVKLLQDMK+EGT LDERLY SA+NALRDAGLQMQA+WLQ++F
Sbjct: 465 IAGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQARWLQESF 524
Query: 601 E 601
+
Sbjct: 525 D 525
>gi|356521196|ref|XP_003529243.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Glycine max]
Length = 601
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/602 (57%), Positives = 459/602 (76%), Gaps = 21/602 (3%)
Query: 16 INTTYTCMKKSYRHTLFSTCKAFP-FVTVNPSSIINHRFF-------------QVNASTN 61
+NT + + H FP TV+PS + RFF + S+N
Sbjct: 1 MNTQFCRTPPHHVHAPIIPTSHFPSLYTVSPS---HPRFFFHANFSASPTPILEEEPSSN 57
Query: 62 FPTI---ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKS 118
P I ++N D Q + P+ + + FL G+ +DP+T+ELA+DYY K+ PEFRPEK
Sbjct: 58 TPIIHVVDVNFDVQQQYSKPEPENLNEFLCGLFEDPKTKELAFDYYQRLKERPEFRPEKP 117
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
TLK +IRYLV K WDSI+S+S+DFK+Y+VLPD TCSRLV C+ RKF++A LL VF
Sbjct: 118 TLKHVIRYLVSLKSWDSILSVSDDFKVYHVLPDRATCSRLVKFCIEHRKFRVAEALLDVF 177
Query: 179 ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE 238
+D ++A +AF+SAM YNKLHM+ +T+LV+E+++S+ +VLDS Y IMEAY K+ + E
Sbjct: 178 KSDSKVAFMAFSSAMRSYNKLHMFRNTVLVFERIRSSNVVLDSRGYLHIMEAYSKLNECE 237
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
KV LF E +SRKL +Y+ILC+SL + GRA EAL +FR+M +KGI E SIY+
Sbjct: 238 KVVQLFREFESRKLRGPTCLAQIYEILCESLARCGRASEALDYFREMTKKGISEY-SIYS 296
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
LI SFAS+ EV +AEEL +EA+ K ++DPEV LKLV MYIEEGL+EKTL+VV+ M++A
Sbjct: 297 KLIYSFASLGEVDVAEELVREAKGKTTIKDPEVYLKLVHMYIEEGLLEKTLEVVKEMEDA 356
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+K+SDCI C +VNGFSK+RG+ AAVKV+E+LIS+G PGQVTYAS+INAY R+ YSKA
Sbjct: 357 DVKVSDCILCTVVNGFSKKRGFSAAVKVFEELISKGNEPGQVTYASVINAYWRLGQYSKA 416
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
E+VF+EM+QKGFDKCV AYS+M+ MYG+TGR+R AM LVAKMK +GC+PNVWIYNSL+DM
Sbjct: 417 EEVFLEMEQKGFDKCVYAYSTMIVMYGRTGRVRSAMKLVAKMKERGCKPNVWIYNSLIDM 476
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
HGR KNL+Q+EKLWKEM+RR+V PDKVSYT++I AY++A EF+ CVK +NE+RMNGG+ID
Sbjct: 477 HGRDKNLKQLEKLWKEMKRRRVAPDKVSYTSIIGAYSKAGEFETCVKLFNEYRMNGGLID 536
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
RA+AGIMVGVFSK+ Q++ELVKLLQDMK+EGT+LD+RLY SA NA +DAGLQ+QA+W+++
Sbjct: 537 RALAGIMVGVFSKVGQVDELVKLLQDMKTEGTRLDQRLYQSAWNAFKDAGLQLQARWMKE 596
Query: 599 NF 600
+F
Sbjct: 597 SF 598
>gi|356575210|ref|XP_003555735.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Glycine max]
Length = 609
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/561 (60%), Positives = 444/561 (79%), Gaps = 3/561 (0%)
Query: 42 TVNPSSIINHRFFQVNASTNFPTIELN--RDSHHQTAVPDAKKFDSFLHGMLKDPQTQEL 99
+ +P+ I+ N T +++N D Q + P+ + + FL G+ +DP+T+EL
Sbjct: 47 SASPTPILEEEPSSSNTPTIIHVVDVNFAADVQKQYSKPEPENLNEFLCGLFEDPKTKEL 106
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A+DYY K+ PEFRPEK TLK +IRYLV K W SI+S+SEDFK+Y+VLPD TCSRLV
Sbjct: 107 AFDYYQRLKERPEFRPEKPTLKHVIRYLVSLKSWGSILSVSEDFKVYHVLPDRATCSRLV 166
Query: 160 ASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVL 219
C+ RKF++A +LL VF D ++A LAF+SAM YNKLHM+ +T+LV+E+MKS+ +VL
Sbjct: 167 KFCIEHRKFRVAESLLYVFKDDSKVAFLAFSSAMRSYNKLHMFRNTVLVFERMKSSNVVL 226
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
DS Y IMEAY K+ + EKV LF E +SRKL + + +Y ILC+SL + GRAFEAL
Sbjct: 227 DSRGYLHIMEAYSKLNECEKVVQLFREFESRKLRGSSYLAQIYVILCESLARHGRAFEAL 286
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
FF +M +KGI E SIY+ LI SFAS+ EV +AEEL +EA+ K ++DPEV LKLV MY
Sbjct: 287 DFFTEMAKKGISEY-SIYSKLIYSFASLREVVVAEELLREAKGKMTIKDPEVYLKLVHMY 345
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
IEEGL+EKTL+VV+ M++A +K+SDCI C +VNGFSK+RG+ AAVKV+E+LIS+G GQ
Sbjct: 346 IEEGLLEKTLEVVKEMEDADVKVSDCILCTVVNGFSKKRGFLAAVKVFEELISKGYESGQ 405
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
VTYAS+INAY R+ YSKAE+VF+EM+QKGFDKCV AYS+M+ MYG+TGR+R AM LVAK
Sbjct: 406 VTYASVINAYWRLGQYSKAEEVFLEMEQKGFDKCVYAYSTMIVMYGRTGRVRSAMKLVAK 465
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
MK +GC+PNVWIYNSL+DMHGR KNL+Q+EKLWKEM+RR+V PDKVSYT++I AY++A E
Sbjct: 466 MKERGCKPNVWIYNSLIDMHGRDKNLKQLEKLWKEMKRRRVAPDKVSYTSIIGAYSKAGE 525
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
F+ CVKF+NE+RMNGG+IDRA+AGIMVGVFSK+ ++ELVKLLQDMK+EGT+LD+RLY S
Sbjct: 526 FETCVKFFNEYRMNGGLIDRAMAGIMVGVFSKVGLVDELVKLLQDMKAEGTRLDQRLYQS 585
Query: 580 AMNALRDAGLQMQAQWLQQNF 600
A NA +DAGLQ+QA+W++++F
Sbjct: 586 AWNAFKDAGLQIQARWMKESF 606
>gi|297807403|ref|XP_002871585.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317422|gb|EFH47844.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 609
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 302/527 (57%), Positives = 396/527 (75%), Gaps = 6/527 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + L L+DP+T++L+ ++Y +AK+ E R T K LI YLV SK W+ +V
Sbjct: 69 PGPDDLNRVLSRFLRDPETRKLSSEFYEKAKENSELR----TTKHLINYLVSSKNWNLLV 124
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
SL ED + + LPDA TCS L+ SC+R RKF+I + LL VF +D +A+ A ++AM G+N
Sbjct: 125 SLCEDLREHKALPDAQTCSNLIRSCIRERKFRITHCLLSVFRSDKSLAVSASDAAMKGFN 184
Query: 198 KLHMYYSTILVYEKMK-SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD-ST 255
KL MY STI V++++K S G+ GCYC+IMEA+ KIGD++KV LF E KS++L
Sbjct: 185 KLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGDNQKVVELFQEVKSQRLSFLA 244
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
S +Y I+C SL KSGRAFEAL+ +MK+KGI E +Y+ LI +FA EV + E+
Sbjct: 245 KESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEK 304
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
LFKEA K +L+DPE+CLK+VLMY+ EG +E+TL+VV +M A+LK++DCI CAIVNGF
Sbjct: 305 LFKEAGGKKLLKDPEMCLKVVLMYVREGKMERTLEVVAAMIKAELKVTDCILCAIVNGFC 364
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K+RG+ A+KVYE + Q C GQVTYA INAYCR+ KAE +F EM +KGFDKCVV
Sbjct: 365 KQRGFAEAIKVYEWAMKQECEAGQVTYAIAINAYCRLEQDDKAEMLFDEMVKKGFDKCVV 424
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
AYS+++ MYGKT R+ DA+ L+AKMK +GC+PN+WIYNSL+DMHGRAK+LR+ EK+WKEM
Sbjct: 425 AYSNIMDMYGKTQRLSDAVKLMAKMKQRGCKPNIWIYNSLIDMHGRAKDLRRAEKIWKEM 484
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+R KV PDKVSYT++ISAYNRA+E + CV+ Y EFRMN G IDRA+AGIMVGVFSK S+I
Sbjct: 485 KRAKVLPDKVSYTSMISAYNRAKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRI 544
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+EL++LLQDMK EGT+LD RLY SA+NALRDAGL Q +WLQ++F+
Sbjct: 545 DELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESFDA 591
>gi|10177342|dbj|BAB10598.1| unnamed protein product [Arabidopsis thaliana]
Length = 563
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 300/527 (56%), Positives = 396/527 (75%), Gaps = 6/527 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + L L+DP+T++L+ ++Y +AK+ E R T K LI YLV SK WD +V
Sbjct: 23 PGPNDLNRVLSRFLRDPETRKLSSEFYEKAKENSELR----TTKHLISYLVSSKSWDLLV 78
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
S+ ED + + LPD TCS L+ SC+R RKF+I + LL VF +D +A+ A ++AM G+N
Sbjct: 79 SVCEDLREHKALPDGQTCSNLIRSCIRDRKFRITHCLLSVFRSDKSLAVSASDAAMKGFN 138
Query: 198 KLHMYYSTILVYEKMK-SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD-ST 255
KL MY STI V++++K S G+ GCYC+IMEA+ KIG++ KV LF E KS++L
Sbjct: 139 KLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLA 198
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
S +Y I+C SL KSGRAFEAL+ +MK+KGI E +Y+ LI +FA EV + E+
Sbjct: 199 KESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEK 258
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
LFKEA K +L+DPE+CLK+VLMY+ EG +E TL+VV +M+ A+LK++DCI CAIVNGFS
Sbjct: 259 LFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFS 318
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K+RG+ AVKVYE + + C GQVTYA INAYCR+ Y+KAE +F EM +KGFDKCVV
Sbjct: 319 KQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVV 378
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
AYS+++ MYGKT R+ DA+ L+AKMK +GC+PN+WIYNSL+DMHGRA +LR+ EK+WKEM
Sbjct: 379 AYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEM 438
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+R KV PDKVSYT++ISAYNR++E + CV+ Y EFRMN G IDRA+AGIMVGVFSK S+I
Sbjct: 439 KRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRI 498
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+EL++LLQDMK EGT+LD RLY SA+NALRDAGL Q +WLQ++F+
Sbjct: 499 DELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESFDA 545
>gi|42567830|ref|NP_196881.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75115356|sp|Q66GP4.1|PP379_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13770, chloroplastic; Flags: Precursor
gi|51536486|gb|AAU05481.1| At5g13770 [Arabidopsis thaliana]
gi|53850491|gb|AAU95422.1| At5g13770 [Arabidopsis thaliana]
gi|332004556|gb|AED91939.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 609
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 300/527 (56%), Positives = 396/527 (75%), Gaps = 6/527 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + L L+DP+T++L+ ++Y +AK+ E R T K LI YLV SK WD +V
Sbjct: 69 PGPNDLNRVLSRFLRDPETRKLSSEFYEKAKENSELR----TTKHLISYLVSSKSWDLLV 124
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
S+ ED + + LPD TCS L+ SC+R RKF+I + LL VF +D +A+ A ++AM G+N
Sbjct: 125 SVCEDLREHKALPDGQTCSNLIRSCIRDRKFRITHCLLSVFRSDKSLAVSASDAAMKGFN 184
Query: 198 KLHMYYSTILVYEKMK-SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD-ST 255
KL MY STI V++++K S G+ GCYC+IMEA+ KIG++ KV LF E KS++L
Sbjct: 185 KLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLA 244
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
S +Y I+C SL KSGRAFEAL+ +MK+KGI E +Y+ LI +FA EV + E+
Sbjct: 245 KESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEK 304
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
LFKEA K +L+DPE+CLK+VLMY+ EG +E TL+VV +M+ A+LK++DCI CAIVNGFS
Sbjct: 305 LFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFS 364
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K+RG+ AVKVYE + + C GQVTYA INAYCR+ Y+KAE +F EM +KGFDKCVV
Sbjct: 365 KQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVV 424
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
AYS+++ MYGKT R+ DA+ L+AKMK +GC+PN+WIYNSL+DMHGRA +LR+ EK+WKEM
Sbjct: 425 AYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEM 484
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+R KV PDKVSYT++ISAYNR++E + CV+ Y EFRMN G IDRA+AGIMVGVFSK S+I
Sbjct: 485 KRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRI 544
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+EL++LLQDMK EGT+LD RLY SA+NALRDAGL Q +WLQ++F+
Sbjct: 545 DELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESFDA 591
>gi|224101979|ref|XP_002312498.1| predicted protein [Populus trichocarpa]
gi|222852318|gb|EEE89865.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 279/394 (70%), Positives = 345/394 (87%), Gaps = 2/394 (0%)
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
M GYNKLHMY ST+ V+EKMK AGI LDSGCY Q M+A +K+GD+E+V +F E +SRK+
Sbjct: 1 MKGYNKLHMYGSTLSVHEKMKLAGIPLDSGCYFQTMKARHKLGDAERVVEMFNEFESRKI 60
Query: 253 DSTPFS-THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
DS P + MYKILC+SLG+SG+ FEAL++FRDMK+KGILED S+Y+SLICS +I EVK
Sbjct: 61 DSKPMILSQMYKILCESLGRSGQVFEALEYFRDMKKKGILEDSSMYSSLICSLVNIREVK 120
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN-AKLKISDCISCAI 370
LAEEL+KEA+EK ML+DPE LKLVL+Y+EEG +EKT+++V+ MK AKLK+SDCI CA+
Sbjct: 121 LAEELYKEAQEKRMLKDPETFLKLVLIYMEEGQMEKTVEIVKEMKGTAKLKVSDCIFCAV 180
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
VNGFSKRRG+ AAVKVYE+L GC PGQVTYAS+INAYCR+ LYSKAE VF EM+ KGF
Sbjct: 181 VNGFSKRRGFDAAVKVYEELKYDGCEPGQVTYASVINAYCRVGLYSKAEVVFFEMEAKGF 240
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
DKCVVAYSS+++MYGKTGR RDAM LVAKMK KGC+PN WIYNSL+DMHGRAK+LR+VEK
Sbjct: 241 DKCVVAYSSIISMYGKTGRPRDAMRLVAKMKLKGCQPNTWIYNSLVDMHGRAKDLRRVEK 300
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
LWKEM+RRKV PDKV+YT++ISAY++++E++MCV+F++E+R+NGGVID AIAGIMVGVFS
Sbjct: 301 LWKEMKRRKVAPDKVTYTSIISAYSKSKEYEMCVRFFHEYRINGGVIDGAIAGIMVGVFS 360
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
K+S+I+EL+KLL+DMKSEG +DERLY SA NA+
Sbjct: 361 KISRIDELLKLLRDMKSEGAPIDERLYVSATNAM 394
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 142/347 (40%), Gaps = 38/347 (10%)
Query: 62 FPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLK 121
F +E RD + + D+ + S + ++ + + LA + Y EA++ + ++ LK
Sbjct: 85 FEALEYFRDMKKKGILEDSSMYSSLICSLVNIREVK-LAEELYKEAQEKRMLKDPETFLK 143
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
L++ Y+ + + + V + ++ K T V+ C+
Sbjct: 144 LVLIYM-EEGQMEKTVEIVKEMK--------GTAKLKVSDCI------------------ 176
Query: 182 GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
F + + G++K + + + VYE++K G Y ++ AY ++G K
Sbjct: 177 -------FCAVVNGFSKRRGFDAAVKVYEELKYDGCEPGQVTYASVINAYCRVGLYSKAE 229
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
+F E +++ D + Y + GK+GR +A++ MK KG + IY SL+
Sbjct: 230 VVFFEMEAKGFDKCVVA---YSSIISMYGKTGRPRDAMRLVAKMKLKGCQPNTWIYNSLV 286
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+++ E+L+KE + + + D ++ Y + E + +
Sbjct: 287 DMHGRAKDLRRVEKLWKEMKRRKVAPDKVTYTSIISAYSKSKEYEMCVRFFHEYRINGGV 346
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
I I+ +V FSK +K+ + S+G + Y S NA
Sbjct: 347 IDGAIAGIMVGVFSKISRIDELLKLLRDMKSEGAPIDERLYVSATNA 393
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 106/229 (46%), Gaps = 5/229 (2%)
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+ G++K Y + + V+E++ G Y + A ++ + ++F E + +
Sbjct: 1 MKGYNKLHMYGSTLSVHEKMKLAGIPLDSGCYFQTMKARHKLGDAERVVEMFNEFESRKI 60
Query: 431 DKCVVAYSSMVAMY----GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
D + S M + G++G++ +A+ MK KG + +Y+SL+ + ++
Sbjct: 61 DSKPMILSQMYKILCESLGRSGQVFEALEYFRDMKKKGILEDSSMYSSLICSLVNIREVK 120
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV-IDRAIAGIM 545
E+L+KE + +++ D ++ ++ Y + + V+ E + + + I +
Sbjct: 121 LAEELYKEAQEKRMLKDPETFLKLVLIYMEEGQMEKTVEIVKEMKGTAKLKVSDCIFCAV 180
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
V FSK + VK+ +++K +G + + Y S +NA GL +A+
Sbjct: 181 VNGFSKRRGFDAAVKVYEELKYDGCEPGQVTYASVINAYCRVGLYSKAE 229
>gi|440577310|emb|CCI55317.1| PH01B001I13.13 [Phyllostachys edulis]
Length = 636
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 273/529 (51%), Positives = 375/529 (70%), Gaps = 3/529 (0%)
Query: 75 TAVPDAKKF---DSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSK 131
+ +PDA K + F+ G+ D QT++LA++ Y A + PEFRPEK T+ L L+++K
Sbjct: 69 SPLPDAPKLGISNKFIRGLCSDRQTEQLAFECYRRALQQPEFRPEKKTVNALTVQLLRAK 128
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNS 191
+W+S+ L EDF+ Y VLP+ TC+RLVASC++ARKF A+ +L V G A++AF+S
Sbjct: 129 QWNSLELLVEDFRAYGVLPERRTCARLVASCIKARKFGFADVVLGVLEGKGAPAIMAFSS 188
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
AM YNKLHMY ST+LVYE+M+ A + ++ Y +M AY +G+ + VA+LF + KSRK
Sbjct: 189 AMQAYNKLHMYRSTVLVYERMRGARLPPNAEAYHAVMAAYGALGEPDVVASLFKQYKSRK 248
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
+ Y I+CD+LG+ GRA +ALK R+M+ GI + +IY+S I S A E
Sbjct: 249 WYPSESCLETYTIVCDTLGREGRALDALKCLREMEADGISPNATIYSSAIGSLADARETA 308
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
AE+L+ EA +K ML DP++ LK+++M++E GLVEKTL V + M+ L+++DCI IV
Sbjct: 309 AAEDLYHEARKKEMLGDPDMFLKVIVMHVETGLVEKTLGVAKDMREIGLRVTDCILSTIV 368
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
NGF KRRG A++ Y++L++ GC PGQVTYAS+IN YCR+ +AE +F EM +G+D
Sbjct: 369 NGFVKRRGLKPAIRAYDKLVALGCEPGQVTYASVINVYCRLGRSDRAESIFSEMIDRGYD 428
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
KCVVAY +M++MYGK R DAM L+A MK KGCEPNVW+YNSL+DMHGR + RQ EK+
Sbjct: 429 KCVVAYGNMISMYGKIRRASDAMRLLALMKQKGCEPNVWVYNSLLDMHGRLGDSRQAEKI 488
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
WKEM RR V PD+VSYT +ISA+NR+ E D C+ Y EFR GG +D+A+AG+M GVFSK
Sbjct: 489 WKEMMRRTVQPDRVSYTAIISAFNRSGELDRCMDLYQEFRETGGKVDKALAGLMAGVFSK 548
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
S+ EL+ LL+DMK EG KLD RLY S +N+LR+AGL++ +WLQ NF
Sbjct: 549 CSRFNELIDLLKDMKLEGAKLDRRLYMSVLNSLREAGLEVHVKWLQSNF 597
>gi|297723401|ref|NP_001174064.1| Os04g0583150 [Oryza sativa Japonica Group]
gi|38346804|emb|CAE04154.2| OSJNBa0088A01.11 [Oryza sativa Japonica Group]
gi|125591406|gb|EAZ31756.1| hypothetical protein OsJ_15910 [Oryza sativa Japonica Group]
gi|215686818|dbj|BAG89668.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675722|dbj|BAH92792.1| Os04g0583150 [Oryza sativa Japonica Group]
Length = 606
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/552 (49%), Positives = 377/552 (68%), Gaps = 14/552 (2%)
Query: 53 FFQVNASTNFPTIELNRDSHHQTAVPDAKKF---DSFLHGMLKDPQTQELAYDYYNEAKK 109
F V+AST P + +PDA K + F+ G+ D QT++LA++ Y A
Sbjct: 58 FHAVSASTPAPV--------PVSPLPDAPKLGISNKFIRGLCSDRQTEQLAFECYRRALH 109
Query: 110 LPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFK 169
PEF P+K T+ L L+++K+W S+ L EDF+ Y V+P+ TC+RLVASCV+ARKF
Sbjct: 110 QPEFLPDKKTMNALTVQLLRAKQWSSLEFLVEDFRAYGVMPERRTCARLVASCVKARKFG 169
Query: 170 IANTLLQVFITD-GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
+A+ +L V G A +AF+SAM YNKLHMY ST+LVYE+M++A + D+ Y +M
Sbjct: 170 LADMVLGVLEGKRGAPAAVAFSSAMQAYNKLHMYRSTLLVYERMRAARLSRDADAYRAVM 229
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
A +G E VA+L + KS K + Y I+CD+LG++GRA +ALK R+M+
Sbjct: 230 AACGALGKPEMVASLLKQYKSHKWYPSESCVETYAIVCDALGRAGRASDALKCLREMEAD 289
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI + +IY+S+I S A E AE+L+ EA +KG L DP++ LK+++M++E G VEK
Sbjct: 290 GIAPNATIYSSIIRSLADAHESSAAEDLYNEAWKKGRLGDPDMFLKVIVMHVEAGRVEKI 349
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+ V + M+ L+++DCI IVNGF KRRG A++ Y++LI+ GC PGQVTYAS+IN
Sbjct: 350 MGVAKDMRETGLRVTDCILSTIVNGFVKRRGLKPAIRAYDKLIALGCEPGQVTYASVINV 409
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
YC++ +AE VF EM +GFDKCVVAY +M++MYGK R DAM L+A MK KGCEPN
Sbjct: 410 YCQLGRSDRAESVFSEMIDRGFDKCVVAYGNMISMYGKISRASDAMRLLAVMKKKGCEPN 469
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+W+YNSL+DMHGR N RQ EK+WKEM RRK+ PD++SYT +I+A+NR+ E D C+ Y
Sbjct: 470 IWVYNSLLDMHGRLGNSRQAEKIWKEMMRRKIQPDRISYTAIINAFNRSGELDRCMDLYQ 529
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
EFR GG +D A+AG+MVGVFSK S+ EL++LL+DM +GT+LD RLY + + +LRDAG
Sbjct: 530 EFRETGGKVDTALAGLMVGVFSKCSRFNELIELLKDM--QGTRLDRRLYLTVLRSLRDAG 587
Query: 589 LQMQAQWLQQNF 600
L++ +WLQ NF
Sbjct: 588 LEVHVKWLQTNF 599
>gi|125549468|gb|EAY95290.1| hypothetical protein OsI_17116 [Oryza sativa Indica Group]
Length = 608
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/526 (50%), Positives = 369/526 (70%), Gaps = 6/526 (1%)
Query: 79 DAKKF---DSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
DA K + F+ G+ D QT++LA++ Y A PEF P+K T+ L L+++K+W S
Sbjct: 78 DAPKLGISNKFIRGLCSDRQTEQLAFECYRRALHQPEFLPDKKTMNALTVQLLRAKQWSS 137
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD-GEIALLAFNSAMG 194
+ L EDF+ Y V+P+ TC+RLVASCV+ARKF +A+ +L V G A +AF+SAM
Sbjct: 138 LEFLVEDFRAYGVMPERRTCARLVASCVKARKFGLADMVLGVLEGKRGAPAAVAFSSAMQ 197
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
YNKLHMY ST+LVYE+M++A + D+ Y +M A +G E VA+L + KS K
Sbjct: 198 AYNKLHMYRSTLLVYERMRAARLSRDADAYRAVMAACGALGKPEMVASLLKQYKSHKWYP 257
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+ Y I+CD+LG++GRA +ALK R+M+ GI + +IY+S+I S A E AE
Sbjct: 258 SESCVETYAIVCDALGRAGRASDALKCLREMEADGIAPNATIYSSIIRSLADAHESSAAE 317
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
+L+ EA +KGML DP++ LK+++M++E G VEKT+ V + M+ L+++DCI IVNGF
Sbjct: 318 DLYNEAWKKGMLGDPDMFLKVIVMHVEAGRVEKTMGVAKDMRETGLRVTDCILSTIVNGF 377
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
KRRG A++ Y++LI+ GC PGQVTYAS+IN YC++ +AE VF EM +GFDKCV
Sbjct: 378 VKRRGLKPAIRAYDKLIALGCEPGQVTYASVINVYCQLGRSDRAESVFSEMIDRGFDKCV 437
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
VAY +M++MYGK R DAM L+A MK KGCEPN+W+YNSL+DMHGR N RQ EK+WKE
Sbjct: 438 VAYGNMISMYGKISRASDAMRLLAVMKKKGCEPNIWVYNSLLDMHGRLGNSRQAEKIWKE 497
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M RRK+ PD++SYT +I+A+NR+ E D C+ Y EFR GG +D A+AG+MVGVFSK S+
Sbjct: 498 MMRRKIQPDRISYTAIINAFNRSGELDRCMDLYQEFRETGGKVDTALAGLMVGVFSKCSR 557
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
EL++LL+DM +GT+LD RLY + + +LRDAGL++ +WLQ NF
Sbjct: 558 FNELIELLKDM--QGTRLDRRLYLTVLRSLRDAGLEVHVKWLQTNF 601
>gi|357165438|ref|XP_003580383.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Brachypodium distachyon]
Length = 612
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 259/526 (49%), Positives = 367/526 (69%), Gaps = 4/526 (0%)
Query: 79 DAKKF---DSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
DA K + F+ G+ D QT++LA++ Y A + PEFRP+K T+ +L +L+++K+W S
Sbjct: 80 DAAKLGISNKFIRGLCGDRQTEQLAFECYRRALQQPEFRPDKKTMNVLTVHLLRAKQWGS 139
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF-ITDGEIALLAFNSAMG 194
+ L EDF Y VLP+ TC+RLVASCVRARKF +A+ LL V G A + F+SAM
Sbjct: 140 LEHLVEDFGAYAVLPERRTCARLVASCVRARKFGLADALLGVLEGKKGAAAAVCFSSAMQ 199
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
YNKLHMY ST+L++E+MK++ + +++ Y +M AY +G+ + VA+LF + +SRK
Sbjct: 200 AYNKLHMYRSTVLLHERMKASCLSVNAEAYRAVMAAYGALGEPDTVASLFKQYRSRKWYP 259
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+ Y I CD+LG++GRA +ALK R+M+ GI D +IY+S+I S A E+ ++
Sbjct: 260 SESCLEAYAIACDALGRAGRAVDALKCLREMEADGISPDAAIYSSVIGSLADAREMASSQ 319
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
+L+ EA K MLRDP++ LK+++M +E GL+E TL V + M+ L+++DC+ IVNGF
Sbjct: 320 DLYHEAWRKEMLRDPDMFLKVIIMQVEAGLLEDTLGVSKDMREIGLRVTDCVMSTIVNGF 379
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K+RG A++ Y++LI+ GC PGQVTYAS IN YCR+ +AE VF EM +GFDKCV
Sbjct: 380 VKKRGLKPAIRAYDKLIAMGCEPGQVTYASAINVYCRLGRSDRAEAVFSEMIDRGFDKCV 439
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
VAY +M++MYG+ R DA L+A MK KGCEPNVW+YNSL+DM G+ + RQ EK+WKE
Sbjct: 440 VAYGNMISMYGQIRRASDATRLLALMKQKGCEPNVWVYNSLLDMRGKLGDSRQAEKIWKE 499
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M RRKV PD++SYT +I A+NR+ E D C+ FY EFR G +D+ +A +MVGVF K S+
Sbjct: 500 MVRRKVQPDRISYTAIIGAFNRSGELDRCMNFYQEFRETGMKVDQTMASLMVGVFCKSSR 559
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
EL++LL+DMK +G KLD RLY +N+LR+AGL++ +WLQ F
Sbjct: 560 FNELIELLRDMKLQGIKLDRRLYMIVLNSLREAGLEVHVKWLQNYF 605
>gi|195612318|gb|ACG27989.1| hypothetical protein [Zea mays]
Length = 603
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 251/545 (46%), Positives = 357/545 (65%), Gaps = 3/545 (0%)
Query: 57 NASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPE 116
N F + A P + F+ G+ DPQT++LA++ Y A PEFR E
Sbjct: 54 NLPDEFEAVPATTTPPLPDAAPKLGISNKFIRGLCGDPQTEQLAFEGYRRALLQPEFRLE 113
Query: 117 KSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQ 176
K T L L++ K+W S+ L EDF+ + VLP+ TC+RLVA C+RA +F +A+ +L
Sbjct: 114 KKTANALTLQLIREKQWGSLELLVEDFRAHGVLPEKRTCARLVACCIRAGRFGLADAVLG 173
Query: 177 VF-ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG 235
V G A +AF++AM YN+LHMY T+L+Y + + A + L++ Y M A +G
Sbjct: 174 VVEAKKGAPAAMAFSAAMQAYNRLHMYRRTVLLYGQARVARLPLNADAYRAAMAACGALG 233
Query: 236 DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
+ + VA+LF +S K + Y ++CD+LGK+GRA +AL+ R+M+ G+ D +
Sbjct: 234 EPDMVASLFKLYRSHKWYPSDSCVETYAVVCDALGKAGRALDALRSLREMEADGLSPDAA 293
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
IY+S+I + A E AE+L+ EA ++ ML DP++ LKL +M+ E GLVE T++V + M
Sbjct: 294 IYSSVIGALADAREKAAAEDLYHEAWDRKMLGDPDMFLKLTIMHAEAGLVESTIEVAKDM 353
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+ L+++DCI IVNGF KRRG A++ Y++L+ GC PGQVTYAS+IN YCR+
Sbjct: 354 RQIGLRVTDCILSTIVNGFVKRRGLKPAIRAYDKLVLIGCEPGQVTYASVINVYCRLGRS 413
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+AE +F EM ++GFD+CVVAY +M++MYGK R +A L+A MK KGCEPNV +YNSL
Sbjct: 414 DRAEAIFSEMIERGFDRCVVAYGNMISMYGKIRRASEATRLLALMKQKGCEPNVLVYNSL 473
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+DMHGR N +Q EK+WKEM RRKV PD++SYT +I A NRA E D C++ Y EFR G
Sbjct: 474 LDMHGRLGNSKQAEKIWKEMLRRKVRPDRISYTAIILANNRAGELDRCMELYQEFRETGR 533
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
+D+ +AG+MVGV SK S+ EL++LL++M GTKLD RLY S + +LRDAGL++ +W
Sbjct: 534 KVDKVMAGLMVGVLSKTSRFNELIELLKEMN--GTKLDRRLYMSVLRSLRDAGLEVHVKW 591
Query: 596 LQQNF 600
LQ NF
Sbjct: 592 LQSNF 596
>gi|414585751|tpg|DAA36322.1| TPA: hypothetical protein ZEAMMB73_184989 [Zea mays]
Length = 603
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 247/518 (47%), Positives = 351/518 (67%), Gaps = 3/518 (0%)
Query: 84 DSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDF 143
+ F+ G+ DPQT++LA++ Y A PEFR EK T L L++ K+W S+ L EDF
Sbjct: 81 NKFIRGLCGDPQTEQLAFEGYRRALLQPEFRLEKKTANALTLQLIREKQWGSLELLVEDF 140
Query: 144 KIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF-ITDGEIALLAFNSAMGGYNKLHMY 202
+ + VLP+ TC+RLVA C+RA +F +A+ +L V G A +AF++AM YN+LHMY
Sbjct: 141 RAHGVLPEKRTCARLVACCIRAGRFGLADAVLGVVEAKKGAPAAMAFSAAMQAYNRLHMY 200
Query: 203 YSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMY 262
T+L+Y + + A + L++ Y M A +G+ + VA+LF +S K + Y
Sbjct: 201 RRTVLLYGQARVARLPLNADAYRAAMAACGALGEPDMVASLFKLYRSHKWYPSDSCVETY 260
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
++CD+LGK+GRA +AL+ R+M+ G+ D +IY+S+I + A E AE+L+ EA +
Sbjct: 261 GVVCDALGKAGRALDALRSLREMEADGLSPDAAIYSSVIGALADAREKAAAEDLYHEAWD 320
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
+ ML DP++ LKL +M+ E GLVE T++V + M+ L+++DCI IVNGF KRRG
Sbjct: 321 RKMLGDPDMFLKLTIMHAEAGLVESTIEVAKDMRQIGLRVTDCILSTIVNGFVKRRGLKP 380
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A++ Y++L+ GC PGQVTYAS+IN YCR+ +AE +F EM ++GFD+CVVAY +M++
Sbjct: 381 AIRAYDKLVLIGCEPGQVTYASVINVYCRLGRSDRAEAIFSEMIERGFDRCVVAYGNMIS 440
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
MYGK R +A L+A MK KGCEPNV +YNSL+DMHGR N +Q EK+WKEM RRKV P
Sbjct: 441 MYGKIRRASEATRLLALMKQKGCEPNVLVYNSLLDMHGRLGNSKQAEKIWKEMVRRKVRP 500
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D++SYT +I A NRA E D C++ Y EFR G +D +AG+MVGV SK S+ EL++LL
Sbjct: 501 DRISYTAIILANNRAGELDRCMELYQEFRETGRKVDMVMAGLMVGVLSKTSRFNELIELL 560
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
++M GTKLD RLY S + +LRDAGL++ +WLQ NF
Sbjct: 561 KEMN--GTKLDRRLYMSVLRSLRDAGLEVHVKWLQSNF 596
>gi|226510065|ref|NP_001142291.1| uncharacterized protein LOC100274460 [Zea mays]
gi|194689130|gb|ACF78649.1| unknown [Zea mays]
gi|194708048|gb|ACF88108.1| unknown [Zea mays]
Length = 419
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/414 (49%), Positives = 287/414 (69%), Gaps = 2/414 (0%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+AF++AM YN+LHMY T+L+Y + + A + L++ Y M A +G+ + VA+LF
Sbjct: 1 MAFSAAMQAYNRLHMYRRTVLLYGQARVARLPLNADAYRAAMAACGALGEPDMVASLFKL 60
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+S K + Y ++CD+LGK+GRA +AL+ R+M+ G+ D +IY+S+I + A
Sbjct: 61 YRSHKWYPSDSCVETYGVVCDALGKAGRALDALRSLREMEADGLSPDAAIYSSVIGALAD 120
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
E AE+L+ EA ++ ML DP++ LKL +M+ E GLVE T++V + M+ L+++DCI
Sbjct: 121 AREKAAAEDLYHEAWDRKMLGDPDMFLKLTIMHAEAGLVESTIEVAKDMRQIGLRVTDCI 180
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
IVNGF KRRG A++ Y++L+ GC PGQVTYAS+IN YCR+ +AE +F EM
Sbjct: 181 LSTIVNGFVKRRGLKPAIRAYDKLVLIGCEPGQVTYASVINVYCRLGRSDRAEAIFSEMI 240
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
++GFD+CVVAY +M++MYGK R +A L+A MK KGCEPNV +YNSL+DMHGR N +
Sbjct: 241 ERGFDRCVVAYGNMISMYGKIRRASEATRLLALMKQKGCEPNVLVYNSLLDMHGRLGNSK 300
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
Q EK+WKEM RRKV PD++SYT +I A NRA E D C++ Y EFR G +D +AG+MV
Sbjct: 301 QAEKIWKEMVRRKVRPDRISYTAIILANNRAGELDRCMELYQEFRETGRKVDMVMAGLMV 360
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
GV SK S+ EL++LL++M GTKLD RLY S + +LRDAGL++ +WLQ NF
Sbjct: 361 GVLSKTSRFNELIELLKEMN--GTKLDRRLYMSVLRSLRDAGLEVHVKWLQSNF 412
>gi|255561711|ref|XP_002521865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538903|gb|EEF40501.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 449
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 193/367 (52%), Positives = 243/367 (66%), Gaps = 66/367 (17%)
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG----L 344
GIL DP TE LA E +K+A E+ R + LKL++ Y+ + L
Sbjct: 95 GILRDPR------------TE-HLAYEYYKKATERQEFRPDKPMLKLLIRYLMQSKNWDL 141
Query: 345 VEKTLD-----------------VVESMKNAKLKISD----CISC----------AIVNG 373
+ D V +K K +I + C C + + G
Sbjct: 142 ILPVADDFNKYNVLPDSNTCSRLVYSCIKTRKFRIVESLLECFKCYSEIPVLAFDSAMRG 201
Query: 374 FSKRRGYWAAVKVYEQLISQGCI------------------PGQVTYASIINAYCRIALY 415
++K Y + + VYE++ + G G+VTYASIINAYCR LY
Sbjct: 202 YNKLHMYSSTISVYEKMKAAGIFMDSGGYCHIMKAYQKIGNTGKVTYASIINAYCRTGLY 261
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
SKAE VF+EMQ KGFDKCVVAYSS+VAMYGKTGR RDAM LVAKMK KGCEPNVWIYNSL
Sbjct: 262 SKAEMVFLEMQGKGFDKCVVAYSSIVAMYGKTGRTRDAMRLVAKMKVKGCEPNVWIYNSL 321
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+DMHGR KNLRQVEKLWKEM+RRKV PDKV+YT+VI+AYN+A+EF+ CV++Y+E+R NGG
Sbjct: 322 LDMHGRVKNLRQVEKLWKEMKRRKVAPDKVTYTSVIAAYNKAKEFETCVRYYHEYRFNGG 381
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
VID+A+AG+MVGVFSK+ +I+EL+KLLQD+K+EGT+LD RLY SA NALRDAGLQMQA+W
Sbjct: 382 VIDKAVAGVMVGVFSKIGRIDELLKLLQDIKTEGTQLDGRLYRSAFNALRDAGLQMQAKW 441
Query: 596 LQQNFEG 602
+Q++FE
Sbjct: 442 MQESFEA 448
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 163/438 (37%), Positives = 241/438 (55%), Gaps = 41/438 (9%)
Query: 3 MAISSSSDCSSALINTTYTCMKKSYRHTLFS-TCKAFPFVTVNPSSIINHRFFQVNAS-- 59
MAIS S D S A I + +K ++ +F+ + K PF+++ S N FQ+NAS
Sbjct: 1 MAISRSPDWSVASIKSC----RKPHKIIVFTPSWKTLPFLSLPCFS--NLSLFQLNASSC 54
Query: 60 ---------TNFPTIELN--RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAK 108
TNFP I+L+ + + +PD+K + FL G+L+DP+T+ LAY+YY +A
Sbjct: 55 PSPILEEPSTNFPVIQLDFRVQNSQEYQIPDSKSLNKFLCGILRDPRTEHLAYEYYKKAT 114
Query: 109 KLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKF 168
+ EFRP+K LKLLIRYL+QSK WD I+ +++DF YNVLPD++TCSRLV SC++ RKF
Sbjct: 115 ERQEFRPDKPMLKLLIRYLMQSKNWDLILPVADDFNKYNVLPDSNTCSRLVYSCIKTRKF 174
Query: 169 KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
+I +LL+ F EI +LAF+SAM GYNKLHMY STI VYEKMK+AGI +DSG YC IM
Sbjct: 175 RIVESLLECFKCYSEIPVLAFDSAMRGYNKLHMYSSTISVYEKMKAAGIFMDSGGYCHIM 234
Query: 229 EAYYKIGDSEKVA------------------ALFLECKSRKLDSTPFSTHMYKILCDSLG 270
+AY KIG++ KV +FLE + + D + Y + G
Sbjct: 235 KAYQKIGNTGKVTYASIINAYCRTGLYSKAEMVFLEMQGKGFDKCVVA---YSSIVAMYG 291
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
K+GR +A++ MK KG + IY SL+ + ++ E+L+KE + + + D
Sbjct: 292 KTGRTRDAMRLVAKMKVKGCEPNVWIYNSLLDMHGRVKNLRQVEKLWKEMKRRKVAPDKV 351
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
++ Y + E + + I ++ +V FSK +K+ + +
Sbjct: 352 TYTSVIAAYNKAKEFETCVRYYHEYRFNGGVIDKAVAGVMVGVFSKIGRIDELLKLLQDI 411
Query: 391 ISQGCIPGQVTYASIINA 408
++G Y S NA
Sbjct: 412 KTEGTQLDGRLYRSAFNA 429
>gi|118487846|gb|ABK95746.1| unknown [Populus trichocarpa]
Length = 184
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 138/181 (76%), Positives = 168/181 (92%)
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
VF EM++KGFDKCVVAYSSM++MYGKTGR RDA LVAKMK KGCEPNVWIYNSL+DMHG
Sbjct: 2 VFSEMEEKGFDKCVVAYSSMISMYGKTGRARDATRLVAKMKLKGCEPNVWIYNSLLDMHG 61
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
RAKNLRQVEKLWKEM+RRKV PDKV+Y++VISAYN+++E++MCV++Y+E+R+NGGVID A
Sbjct: 62 RAKNLRQVEKLWKEMKRRKVAPDKVTYSSVISAYNKSKEYEMCVRYYHEYRINGGVIDGA 121
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+AGIM GVFSK+S+I+ELVKLL+DMKSEGT +DERLY SA NA+RDAGL +QA+WLQ +F
Sbjct: 122 MAGIMAGVFSKISRIDELVKLLRDMKSEGTPIDERLYRSATNAMRDAGLDIQAKWLQDSF 181
Query: 601 E 601
+
Sbjct: 182 K 182
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 72/159 (45%)
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F E EEKG + ++ MY + G +V MK + + I ++++
Sbjct: 2 VFSEMEEKGFDKCVVAYSSMISMYGKTGRARDATRLVAKMKLKGCEPNVWIYNSLLDMHG 61
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ + K+++++ + P +VTY+S+I+AY + Y + + E + G
Sbjct: 62 RAKNLRQVEKLWKEMKRRKVAPDKVTYSSVISAYNKSKEYEMCVRYYHEYRINGGVIDGA 121
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
M ++ K RI + + L+ MK++G + +Y S
Sbjct: 122 MAGIMAGVFSKISRIDELVKLLRDMKSEGTPIDERLYRS 160
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 263/495 (53%), Gaps = 4/495 (0%)
Query: 96 TQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTC 155
++++ ++Y K F P L++ +KW ++ L ++ N PD
Sbjct: 3 NRQVSVEFYKWVKSQDGFEPHFHLYVAFAHCLMRVQKWVALEILVDEMIGKNCPPDIKFY 62
Query: 156 SRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKS 214
+ ++ + +F+ A G ++ +N + Y K + + + ++K
Sbjct: 63 ALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKD 122
Query: 215 AGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGR 274
G++ DSG YC ++ A K+G+ +K E + + + Y IL D GK+GR
Sbjct: 123 EGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVA---YSILIDMFGKAGR 179
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
+A FR+++ G L D Y +LI +FA + V A +FKEA+ L DP +
Sbjct: 180 HEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYT 239
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
++ +Y + + ++ L V++ MK L+ ++ +++N F + A+K++E++
Sbjct: 240 MIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESN 299
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
C G+ TY +++N Y + +S AE++ +M+Q GF + VVAYS+++ MYGK G++++A
Sbjct: 300 CRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEAT 359
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L + MK +GC+ N+ +YN+++DM+G+A + E+L E++ K+ PD V+YTT+I+AY
Sbjct: 360 RLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAY 419
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
NR F+ C++ + + R +G +DR + IM+ V+ K Q +L +LL+ M G + D
Sbjct: 420 NRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLEVMPKSGIQPDT 479
Query: 575 RLYHSAMNALRDAGL 589
R+ + + D G+
Sbjct: 480 RILKTVVEIYEDGGM 494
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%)
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
GC P V Y +I Y + +S+A K F +++ +G Y ++++ K G I
Sbjct: 89 GCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKG 148
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ +M+ G +P+ Y+ L+DM G+A ++E++ PD V+Y T+I A
Sbjct: 149 NETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHA 208
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ + D + E + + + D I M+ V++K ++ + +L+ MK G + +
Sbjct: 209 FAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPN 268
Query: 574 ERLYHSAMNALRDAGLQMQA 593
E Y S +NA A M A
Sbjct: 269 ELGYGSVLNAFMRANQPMGA 288
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 135/313 (43%)
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+M K D YA +I + + A+ F + + G D + L+L Y + G
Sbjct: 49 EMIGKNCPPDIKFYALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRG 108
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
+ + +K+ L CA+++ K + +++ G P QV Y+
Sbjct: 109 NFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYS 168
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
+I+ + + + A F E+Q G+ VAY++++ + K G + A + + +
Sbjct: 169 ILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRS 228
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
C + I+ +++ ++ +A+ Q + K M+ + P+++ Y +V++A+ RA +
Sbjct: 229 FCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGA 288
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+K + E + + + M+ V+SK +LL M+ G + + Y + ++
Sbjct: 289 IKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDM 348
Query: 584 LRDAGLQMQAQWL 596
G +A L
Sbjct: 349 YGKVGKLQEATRL 361
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 1/212 (0%)
Query: 383 AVKVYEQLISQ-GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+V+ Y+ + SQ G P Y + + R+ + E + EM K + Y+ ++
Sbjct: 7 SVEFYKWVKSQDGFEPHFHLYVAFAHCLMRVQKWVALEILVDEMIGKNCPPDIKFYALVI 66
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
TGR + A +KMK GC P++ IYN L+ +G+ N Q K + +++ +
Sbjct: 67 KEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLL 126
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD +Y V+SA + D + E R G D+ I++ +F K + E+
Sbjct: 127 PDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAAT 186
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
++++ G D Y++ ++A G+ QA
Sbjct: 187 FRELQMSGYLPDSVAYNTLIHAFAKVGMVDQA 218
>gi|147809559|emb|CAN71209.1| hypothetical protein VITISV_030057 [Vitis vinifera]
Length = 109
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 100/109 (91%)
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+R+KV PD+VSYT+VISAY++A +F+ C++FY+EFRMNGGVIDR IAGIMVG+FSK +
Sbjct: 1 MKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGR 60
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
++ELVKLLQDMK+EGT LDERLY SA+NALRDAGLQMQA+WLQ++F+ T
Sbjct: 61 VDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQARWLQESFDTT 109
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYGKTGRIRD 452
+P +V+Y S+I+AY + + + + E + G D+ + MV ++ K+GR+ +
Sbjct: 6 VVPDRVSYTSVISAYSKAGDFETCMRFYHEFRMNGGVIDRVIAGI--MVGIFSKSGRVDE 63
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMD 477
+ L+ MK +G + +Y S ++
Sbjct: 64 LVKLLQDMKTEGTGLDERLYRSALN 88
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
MK +V D Y ++ AY K GD E + E + ++ + I+ K
Sbjct: 1 MKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEFR---MNGGVIDRVIAGIMVGIFSK 57
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLI 301
SGR E +K +DMK +G D +Y S +
Sbjct: 58 SGRVDELVKLLQDMKTEGTGLDERLYRSAL 87
>gi|388514145|gb|AFK45134.1| unknown [Lotus japonicus]
Length = 208
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 130/216 (60%), Gaps = 25/216 (11%)
Query: 3 MAISSSSDCSSALINTTYTCMKKSYRHTLFSTCKAFPFVTVNPSSIINHRFFQVNAS--- 59
MAIS S+D S A T + H+ TC V+ S N RFF N+S
Sbjct: 1 MAISCSADWSLACTRT--------HVHSFIPTCHFPSSYNVSSYSSSNPRFFSANSSASP 52
Query: 60 ---------TNFPTIELNR-----DSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYN 105
+N P ++++ SH Q + P + + FL G+ +DP+T+ELA+DYY
Sbjct: 53 TPILEEASNSNTPMLDVDNVNNIAGSHQQYSNPGTENLNEFLCGLFQDPKTEELAFDYYQ 112
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
K P FRPEKSTLK +IRYL++ KKWD I+S+SEDFKIY+VLPD TCS+L+ C+R
Sbjct: 113 RLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQ 172
Query: 166 RKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHM 201
RKFKIA TLL F +D E+A+ AF SA+ YNKLH+
Sbjct: 173 RKFKIAETLLNAFRSDSEVAVFAFGSALRNYNKLHV 208
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/522 (22%), Positives = 239/522 (45%), Gaps = 6/522 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ ++S L+ + K Q +E + E K ++ P+ + LI L ++ KW++ +
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLF--EELKAAKWTPDVVSYSCLINSLGRAGKWEAAL 64
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+ + + P+ T + LV +A +F A LL +G + + +N +
Sbjct: 65 EVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTL 124
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K ++ +M+ G V D+ Y ++ K+G S+K L E + P
Sbjct: 125 GKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERH---GCP 181
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y L LGK G +A K F++MK +G D + +L+ + V A EL
Sbjct: 182 PDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALEL 241
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E +E+G+ L+ + + G + + ++++ MK K ++ G K
Sbjct: 242 LDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIK 301
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A +V +++ +GC P +TY ++IN + L + A ++F M+ KG + VV
Sbjct: 302 ASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVT 361
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
YS+++ GK R+ A L +M++ G +P+++ Y S++ + G+A + ++L+ EM
Sbjct: 362 YSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMR 421
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ ++PD ++Y +++ R F K + + + +G + D A ++ SK +++
Sbjct: 422 GKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVD 481
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+ LL+++ +G D + + L G +A L Q
Sbjct: 482 DACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQ 523
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 221/478 (46%), Gaps = 8/478 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P T L+ L ++ ++D + L + + +PD T + L+++ +A + A T
Sbjct: 76 KPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFT 135
Query: 174 LLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L G + +NS + G K+ + + E+M+ G D Y ++
Sbjct: 136 LFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLG 195
Query: 233 KIGDSEKVAALFLECK--SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K G++ K LF E K RK DS F+ M D+LGK+GR +AL+ +MKE+G+
Sbjct: 196 KDGETVKAFKLFQEMKRRGRKPDSITFTALM-----DALGKAGRVDDALELLDEMKERGV 250
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
Y +LI F + ++ A L E + G D L+ I+ +++
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQ 310
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
V++ M+ ++NG K A ++++++ S+GC P VTY+++I A
Sbjct: 311 VLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALG 370
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ A A +F EM+ G + Y S++ + GK G++ DA L ++M+ KG P+V
Sbjct: 371 KAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVI 430
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YN+ ++ GR ++ K++++M+ + PD +Y ++ ++ +E D E
Sbjct: 431 TYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKEL 490
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G D + + + ++E +LLQ S+G Y++ ++AL AG
Sbjct: 491 IEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAG 548
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 110/518 (21%), Positives = 214/518 (41%), Gaps = 41/518 (7%)
Query: 72 HHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSK 131
+ VPD ++S ++G+ K ++Q+ A + E ++ P+ T LI L +
Sbjct: 141 RERGCVPDTFTYNSLIYGLGKVGRSQK-AMELLEEMER-HGCPPDVMTYSSLITGLGKDG 198
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFN 190
+ L ++ K PD+ T + L+ + +A + A LL G + ++ +N
Sbjct: 199 ETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYN 258
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ + G+ K+ + ++MK G D Y ++ K ++ + K
Sbjct: 259 ALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVL---KKM 315
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ + P T Y L + LGK+G +A + F MK KG D Y++LI + V
Sbjct: 316 EKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARV 375
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
+ A LF+E E G+ D + Y C+I
Sbjct: 376 ESACVLFEEMESVGIQPD-------LFTY----------------------------CSI 400
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+ K A +++ ++ +G P +TY + +N+ R + +A K+F +M++ G
Sbjct: 401 ITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGL 460
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
V Y +++ KT + DA L+ ++ +GC + ++ +++ N+ + +
Sbjct: 461 LPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHE 520
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L + + + P SY +I A +A + + GG D ++
Sbjct: 521 LLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALG 580
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ QI+ +LL++M G KL R Y + + L+D G
Sbjct: 581 QTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618
>gi|62319585|dbj|BAD95045.1| putative protein [Arabidopsis thaliana]
Length = 126
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/108 (68%), Positives = 92/108 (85%)
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+R KV PDKVSYT++ISAYNR++E + CV+ Y EFRMN G IDRA+AGIMVGVFSK S+
Sbjct: 1 MKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSR 60
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
I+EL++LLQDMK EGT+LD RLY SA+NALRDAGL Q +WLQ++F+
Sbjct: 61 IDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESFDA 108
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIE--MQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
+P +V+Y S+I+AY R + +++ E M + D+ + MV ++ KT RI +
Sbjct: 6 VLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGI--MVGVFSKTSRIDE 63
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMD 477
M L+ MK +G + +Y+S ++
Sbjct: 64 LMRLLQDMKVEGTRLDARLYSSALN 88
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 227/469 (48%), Gaps = 9/469 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKW-DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
RP L+ +V+ + + D+++SLS+ ++ + PD +T L+ + ++ +
Sbjct: 118 RPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGF 177
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
++L I G ++ ++ FN+ + G K+ + + +++ M + G D Y I+
Sbjct: 178 SVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGL 237
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKG 289
KIG++ A LF RK+ + Y + DSL K R EAL F MK KG
Sbjct: 238 CKIGETVAAAGLF-----RKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKG 292
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
I + Y SLI + + + A + E ++ + L+ ++ +EG V +
Sbjct: 293 ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEAR 352
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
V+++M ++ + +++NG+S + A K+++ +I++GC P +Y +IN Y
Sbjct: 353 GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGY 412
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ +A+++F EM +G +V+Y++++ + GR+R+A L M G P++
Sbjct: 413 CKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDL 472
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
Y+ L+D + L + +L++ M+ + P+ V Y +I A ++R K ++E
Sbjct: 473 CTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSE 532
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ G + I ++ K ++E ++ ++M+ +G +E Y+
Sbjct: 533 LFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYN 581
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 182/407 (44%), Gaps = 18/407 (4%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEK-MKSAGIVLDS-------GCYCQIMEAYYKIGDS 237
++ FN + K+ Y+ ++ K M+ AG+ D+ C+ Q+
Sbjct: 121 IIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVL 180
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
K+ L L+ L F+T L + L K G+ +A++ F DM +G D Y
Sbjct: 181 AKIIKLGLQ-----LTIVTFNT-----LINGLCKVGKFGQAVELFDDMVARGYQPDVHTY 230
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++I I E A LF++ E G D ++ ++ V + LD+ MK
Sbjct: 231 TTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKA 290
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ + +++ G + A + +++S +P VT++ +IN +C+ +
Sbjct: 291 KGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFE 350
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A V M + G + VV YSS++ Y + +A L M KGC+P+V+ YN L++
Sbjct: 351 ARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILIN 410
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ +AK + + ++L+ EM + +TPD VSY T+I + + NG +
Sbjct: 411 GYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLP 470
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
D I++ F K + + +L + M+S K + +Y+ ++A+
Sbjct: 471 DLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 517
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 111/231 (48%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
I+NG K AA ++ ++ GC P VTY++II++ C+ ++A +F M+ K
Sbjct: 232 TIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAK 291
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G + Y+S++ R R+A ++ +M + PN+ ++ L+++ + N+ +
Sbjct: 292 GISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEA 351
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+ K M V P+ V+Y+++++ Y+ E K ++ G D I++
Sbjct: 352 RGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILING 411
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
+ K +I E +L +M +G D Y++ ++ L G +A L +N
Sbjct: 412 YCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 462
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 138/360 (38%), Gaps = 53/360 (14%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ ++S + G+ + +E A NE L P T LLI +
Sbjct: 295 PNIFTYNSLIQGLCNFSRWRE-ASAMLNEMMSL-NIMPNIVTFSLLINIFCKEGNVFEAR 352
Query: 138 SLSEDFKIYNVLPDAHTCSRLV------ASCVRARKFKIANTLLQVFITDG-EIALLAFN 190
+ + V P+ T S L+ A V ARK L V IT G + + ++N
Sbjct: 353 GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARK------LFDVMITKGCKPDVFSYN 406
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ GY K ++ +M G+ D Y +++ ++G + LF K+
Sbjct: 407 ILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF---KNM 463
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ Y IL D K G +A + FR M+ + + +Y LI + +
Sbjct: 464 LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNL 523
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
K A +LF E +G+ + ++ ++ +EGL+++ L+ +M+
Sbjct: 524 KEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME-------------- 569
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
GC P + +Y II + + S+A ++ EM++KGF
Sbjct: 570 ---------------------EDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGF 608
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 132/563 (23%), Positives = 246/563 (43%), Gaps = 68/563 (12%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A+ +++E K P+ T +I L + + D V + E + +P A+ +
Sbjct: 285 DMAWKFFHEIKS-HGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNT 343
Query: 158 LVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMK--- 213
++ A KF A +LL+ G I +++A+N + K + +E+MK
Sbjct: 344 MIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA 403
Query: 214 -----SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----------CKSRKLDS--T 255
+ +++D C +EA +K+ D+ K A LF CK++KLD +
Sbjct: 404 APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACS 463
Query: 256 PFSTHMYKI----------LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
F +KI L D LGK GR +A + + M + + + +Y SLI SF
Sbjct: 464 IFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFF 523
Query: 306 SITEVKLAEELFKEAEEKGMLRD---------------------------------PEVC 332
+ ++FKE +G D P+V
Sbjct: 524 KCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVM 583
Query: 333 LKLVLMY--IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
+L++ ++ G +T ++ +MK + ++GF K A ++ E++
Sbjct: 584 SYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEM 643
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
++G P VTY S+I+ +I +A +F E + G + VV YSS++ +GK GRI
Sbjct: 644 KTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRI 703
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
+A ++ ++ KG PNV+ +N L+D +A+ + + ++ M+ K TP+ ++Y+ +
Sbjct: 704 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSIL 763
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
I+ R R+F+ F+ E + G + M+ +K I E L + K+ G
Sbjct: 764 INGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGG 823
Query: 571 KLDERLYHSAMNALRDAGLQMQA 593
D Y++ + L + M+A
Sbjct: 824 VPDSASYNAIIEGLSYSRRAMEA 846
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/494 (20%), Positives = 203/494 (41%), Gaps = 42/494 (8%)
Query: 96 TQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTC 155
Q ++Y + E K PE LL+ + ++ K+D + + I P TC
Sbjct: 109 NQAISYFRWTERKTDQALCPEAYDSLLLV--MAKNVKFDYFEQILGEMSIAGFGPSTKTC 166
Query: 156 SRLVASCVRARKFKIANTLLQVFIT-DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKS 214
L+ SC+++ K + L+Q A A+ + +G + + + ++ +M+
Sbjct: 167 IELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQE 226
Query: 215 AGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGR 274
G + + ++ + + G + +L E KS L + +Y + D GK+G+
Sbjct: 227 LGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHA---DIVLYNVCIDCFGKAGK 283
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
A KFF ++K G+L D Y S+I + A E+F++ E+ +
Sbjct: 284 VDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNT 343
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
+++ Y G ++ ++E K ++G
Sbjct: 344 MIMGYGSAGKFDEAYSLLERQK-----------------------------------ARG 368
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
CIP + Y I+ + +A + F EM++ + Y+ ++ M K G + A
Sbjct: 369 CIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPN-LSTYNVLIDMLCKAGEVEAAF 427
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ MK G PNV N ++D +AK L + +++ M + +PD+V++ ++I
Sbjct: 428 KVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGL 487
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ D + Y + + + + + ++ F K + E+ K+ ++M G D
Sbjct: 488 GKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDL 547
Query: 575 RLYHSAMNALRDAG 588
RL ++ M+ + AG
Sbjct: 548 RLLNAYMDCVFKAG 561
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 175/421 (41%), Gaps = 14/421 (3%)
Query: 72 HHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSK 131
+H+ PD F S + G+ K + + AY Y + + P LI+ +
Sbjct: 469 NHKICSPDEVTFCSLIDGLGKQGRVDD-AYRLYEQMLDSDKI-PNAVVYTSLIKSFFKCG 526
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFN 190
+ + + ++ PD + + +A + L + + G I +++++
Sbjct: 527 RKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYS 586
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ G K T ++ MK G VLD+ Y ++ + K G K L E K++
Sbjct: 587 ILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTK 646
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
T + Y + D L K R EA F + K G+ + IY+SLI F + +
Sbjct: 647 GRQPTVVT---YGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRI 703
Query: 311 KLAEELFKEAEEKGMLRDPEV----CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
A + +E +KG+ P V CL L+ EE + + L ++MKN K +
Sbjct: 704 DEAYLIMEELMQKGL--TPNVYTWNCLLDALVKAEE--INEALVCFQNMKNLKGTPNHIT 759
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
++NG + R + A ++++ QG P +TY ++I + ++A +F +
Sbjct: 760 YSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFK 819
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
G +Y++++ + R +A + + + KGC + +L+D + + L
Sbjct: 820 ANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLE 879
Query: 487 Q 487
Q
Sbjct: 880 Q 880
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/364 (19%), Positives = 153/364 (42%), Gaps = 21/364 (5%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+ K +A V+D C+I+E+ D E +LF+E S K D ++
Sbjct: 56 WTKSGTAKEVVDD--VCKILESGNWGPDVENALSLFVE--SPKTD----------LVIGV 101
Query: 269 LGKSGRAFEALKFFRDMKEKGILED----PSIYASLICSFASITEVKLAEELFKEAEEKG 324
L ++ +A+ +FR + K D P Y SL+ A + E++ E G
Sbjct: 102 LRRAKDVNQAISYFRWTERK---TDQALCPEAYDSLLLVMAKNVKFDYFEQILGEMSIAG 158
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ C++L+L I+ + + D+++ M+ K + + ++ S + +
Sbjct: 159 FGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIML 218
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
++ Q+ G + ++I + R A + EM+ +V Y+ + +
Sbjct: 219 TLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCF 278
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
GK G++ A ++K+ G P+ Y S++ + + L + +++++ME+ + P
Sbjct: 279 GKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCA 338
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+Y T+I Y A +FD + G + ++ K ++ E ++ ++
Sbjct: 339 YAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEE 398
Query: 565 MKSE 568
MK +
Sbjct: 399 MKKD 402
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 226/472 (47%), Gaps = 15/472 (3%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P LI+ VQ +++ + L + VLPD + L+ RA+K + A
Sbjct: 483 KPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKM 542
Query: 174 LLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEK----MKSAGIVLDSGCYCQIME 229
LL + GE + G + L+ I V E+ M S+GIV ++ Y +++
Sbjct: 543 LL---VDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIK 599
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
+ +G++ + + F +C K P Y + SL K+G+ EA+ F + G
Sbjct: 600 GHCDVGNTVEALSTF-KCMLEK-GLIP-DIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++ D +Y SLI F +++ A +L+ E G+ + V L+ + G V K
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAR 716
Query: 350 DVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
++ + ++ L + D ++ I++G+ K A K+++++IS+G P Y +I+
Sbjct: 717 ELFDEIEEKDL-VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG 775
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+ KA +F E QQK + A++S++ + K G++ +A L M K PN
Sbjct: 776 CGKEGNLEKALSLFHEAQQKSVGS-LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPN 834
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR-AREFDMCVKFY 527
+ Y L+D +G+A+ + + E+L+ +ME R + P+ ++YT+++ +YN+ F M + +
Sbjct: 835 IVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKM-ISLF 893
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ G D G+M + K + E +KLL EG KL++ ++ +
Sbjct: 894 KDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDA 945
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/502 (23%), Positives = 211/502 (42%), Gaps = 39/502 (7%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
E +P T I L Q+ D + + + + PD HT + LV + ++ K A
Sbjct: 271 ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEA 330
Query: 172 -------------------NTLLQVFITDGEIA-----------------LLAFNSAMGG 195
L+ FI +G I ++ +N+ +GG
Sbjct: 331 KLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGG 390
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K + ++ +M AG+ D+ Y +++ Y K D K L E K+RKL +
Sbjct: 391 IAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPS 450
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
PF+ Y +L L S +A + M G+ + +Y +LI ++ + ++A E
Sbjct: 451 PFT---YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L K G+L D L++ VE+ ++ M +K + A +N +S
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYS 567
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A + ++ ++S G +P V Y +I +C + +A F M +KG +
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR 627
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
AYS+++ K G+ ++AM + K G P+V++YNSL+ + ++ + +L+ EM
Sbjct: 628 AYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ P+ V Y T+I+ + E + ++E V D ++ + K +
Sbjct: 688 LHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNL 747
Query: 556 EELVKLLQDMKSEGTKLDERLY 577
E KL +M S+G D +Y
Sbjct: 748 TEAFKLFDEMISKGISPDGYIY 769
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/551 (22%), Positives = 233/551 (42%), Gaps = 56/551 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKL---PEFRPEKSTLKLLIRYLVQSKKWD 134
P+ +++F+ G+ Q A D E KKL P+ T LL+ + K+
Sbjct: 274 PNLFTYNAFIGGL-----CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSK 328
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAM 193
+ E + P+ T + L+ ++ + A + IT G ++ ++ +N+ +
Sbjct: 329 EAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
GG K + ++ +M AG+ D+ Y +++ Y K D K L E K+RKL
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLT 448
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+PF+ Y +L L S +A + M G+ + +Y +LI ++ + ++A
Sbjct: 449 PSPFT---YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMA 505
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
EL K G+L D L++ VE+ ++ M +K + A +N
Sbjct: 506 IELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINL 565
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+SK A + ++ ++S G +P V Y +I +C + +A F M +KG
Sbjct: 566 YSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPD 625
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAK---------------------------------- 459
+ AYS+++ K G+ ++AM + K
Sbjct: 626 IRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYD 685
Query: 460 -MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
M G PN+ +YN+L++ + + + +L+ E+E + + PD V+Y+T+I Y ++
Sbjct: 686 EMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSG 745
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD--MKSEGTKLDERL 576
K ++E G D I I++ K +E+ + L + KS G+
Sbjct: 746 NLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGS------ 799
Query: 577 YHSAMNALRDA 587
SA N+L D+
Sbjct: 800 -LSAFNSLIDS 809
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 111/521 (21%), Positives = 228/521 (43%), Gaps = 8/521 (1%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKL---PEFRPEKSTLKLLIRYLVQSKKW 133
+ + K + F++G L QE Y+ E K+ P+ LI L ++KK
Sbjct: 478 IRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKV 537
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL-LAFNSA 192
+ L D + P+AHT + ++ + ++A + ++ G + + +
Sbjct: 538 EEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTIL 597
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G+ + + ++ M G++ D Y I+ + K G +++ +FL K K
Sbjct: 598 IKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFL--KFLKT 655
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
P +Y L K G +A + + +M GI + +Y +LI + EV
Sbjct: 656 GVVP-DVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTK 714
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A ELF E EEK ++ D ++ Y + G + + + + M + + I C +++
Sbjct: 715 ARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILID 774
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G K A+ ++ + Q + + S+I+++C+ +A ++F +M K
Sbjct: 775 GCGKEGNLEKALSLFHE-AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTP 833
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+V Y+ ++ YGK + +A L M+ + PN Y SL+ + + N ++ L+
Sbjct: 834 NIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLF 893
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
K+ME R + D ++Y + SAY + + +K N+ + G ++ + ++ K
Sbjct: 894 KDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKE 953
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
QI +++LL +M E L + ++ + +G + +A
Sbjct: 954 KQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEA 994
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 173/395 (43%), Gaps = 3/395 (0%)
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
L++E M S+G+ + Y +++ + K G+ E+ + E +R L + Y +
Sbjct: 332 LIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLK---LNVVTYNAMI 388
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ K+G +A+ F +M G+ D Y LI + ++ A EL E + + +
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLT 448
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
P L+ ++K +V++ M +K + + ++ + + Y A+++
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ +I+ G +P Y +I CR +A+ + ++M +KG Y + + +Y K
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
+G I+ A M + G PN IY L+ H N + +K M + + PD +
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y+ +I + ++ + + + +F G V D + ++ F K IE+ +L +M
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
G + +Y++ +N L G +A+ L E
Sbjct: 689 HNGINPNIVVYNTLINGLCKLGEVTKARELFDEIE 723
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 171/390 (43%), Gaps = 12/390 (3%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK----VAALFLECKSRKLDSTPFSTHMYK 263
VY M A IV D Y +++A+ K+GD K ++ + ECK + Y
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKP--------NLFTYN 280
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
L ++G EAL+ + M EKG+ D Y L+ F K A+ +F+
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G+ + L+ +I+EG +E+ L + + M LK++ A++ G +K A
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+ ++ +++ G P TY +I+ Y + +KA ++ EM+ + YS +++
Sbjct: 401 MSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+ ++ A ++ +M G +PNV++Y +L+ + + +L K M V PD
Sbjct: 461 LCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
Y +I RA++ + + G + G + ++SK +I+ + +
Sbjct: 521 LFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFK 580
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
DM S G + +Y + D G ++A
Sbjct: 581 DMLSSGIVPNNVIYTILIKGHCDVGNTVEA 610
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 143/306 (46%), Gaps = 15/306 (4%)
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
K + M E I+ D Y ++I + + +V + + E E++ C + Y
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE--------CKPNLFTY 279
Query: 340 -------IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
+ G V++ L+V + M L +V+GF K++ A ++E + S
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS 339
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
G P + TY ++I+ + + +A ++ EM +G VV Y++M+ K G +
Sbjct: 340 SGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAK 399
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
AM L +M G EP+ W YN L+D + ++ ++ + +L EM+ RK+TP +Y+ +IS
Sbjct: 400 AMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLIS 459
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ + + ++ NG + + G ++ + + S+ E ++LL+ M + G
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519
Query: 573 DERLYH 578
D Y+
Sbjct: 520 DLFCYN 525
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/400 (19%), Positives = 175/400 (43%), Gaps = 5/400 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ +I L ++ K + + F V+PD + L++ + + A+ L
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ +G ++ +N+ + G KL ++++++ +V D Y I++ Y K
Sbjct: 684 YDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCK 743
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G+ + LF E S+ + +P ++Y IL D GK G +AL F + ++K +
Sbjct: 744 SGNLTEAFKLFDEMISKGI--SP-DGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GS 799
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
S + SLI SF +V A ELF + +K + + L+ Y + ++E+ +
Sbjct: 800 LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFL 859
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M+ + + +++ +++ + + +++ + ++G + Y + +AYC+
Sbjct: 860 DMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEG 919
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+A K+ + +G + +++ K +I + L+++M + + N
Sbjct: 920 KSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCN 979
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+L+ ++ N + K+ M+R P +S T IS
Sbjct: 980 TLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIST 1019
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 147/342 (42%), Gaps = 17/342 (4%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
H P+ +++ ++G+ K + + A + ++E ++ + P+ T +I +S
Sbjct: 689 HNGINPNIVVYNTLINGLCKLGEVTK-ARELFDEIEE-KDLVPDVVTYSTIIDGYCKSG- 745
Query: 133 WDSIVSLSEDFKIYN------VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL 186
+L+E FK+++ + PD + L+ C + + A +L +L
Sbjct: 746 -----NLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSL 800
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
AFNS + + K +++ M + + Y +++AY K E+ LFL+
Sbjct: 801 SAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLD 860
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
++R + P +T Y L S + G F+ + F+DM+ +GI D Y + ++
Sbjct: 861 METRNI--IP-NTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCK 917
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
+ A +L ++ +G+ + +V L+ +E + L+++ M +L +S
Sbjct: 918 EGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKT 977
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
++ GF K A KV + G +P ++ I+
Sbjct: 978 CNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIST 1019
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 97/214 (45%), Gaps = 1/214 (0%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A V+ IS+G P + +++ + + KV+ M + V Y++++
Sbjct: 191 ASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIK 250
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ K G + ++++M+ K C+PN++ YN+ + + + + ++ K M + + P
Sbjct: 251 AHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGP 309
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D +YT ++ + + + + +G +R ++ F K IEE +++
Sbjct: 310 DGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIK 369
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+M + G KL+ Y++ + + AG +A L
Sbjct: 370 DEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSL 403
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 174/381 (45%), Gaps = 3/381 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V +M S I+ D+ Y ++ ++K+G F E S+K+ S + T Y L
Sbjct: 350 VLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKI-SPDYIT--YTTLIQ 406
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
G+ G+ E F +M +G+ D Y +LI + E+ A L E + GM
Sbjct: 407 GFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP 466
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ L+ + G ++ ++++ M+ L+++ CI ++VNG K A+K+
Sbjct: 467 NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLM 526
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++ G P +TY ++I+AYCR+ KA K+ EM +G VV ++ ++ +
Sbjct: 527 KEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCML 586
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G + D L+ M KG P+ YN+LM H ++ K++K M + V PD +Y
Sbjct: 587 GMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTY 646
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+I + +AR Y E G V ++ F K +I E +L ++M+
Sbjct: 647 NILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRG 706
Query: 568 EGTKLDERLYHSAMNALRDAG 588
G D +Y+ ++ + G
Sbjct: 707 HGLVADGEIYNFFVDMCYEEG 727
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 169/366 (46%), Gaps = 3/366 (0%)
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
GI ++ Y I+ + ++G ++ L ++ R STP Y + D G
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRS--STP-DVVSYSTVIDGYCHLGEL 309
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
+ALK DM+ KG+ + Y S+I I + AE++ +E + ++ D V L
Sbjct: 310 KKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL 369
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ + + G V + M + K+ ++ GF + ++ ++IS+G
Sbjct: 370 IHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGL 429
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P +VTY ++I+ YC+ A + EM Q G +V Y +++ K G + A
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L+ +M+ KG + NV IYNS+++ +A N+ Q KL KEME + PD ++YTTVI AY
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
R + D K E G +++ F L +E+ +LL M +G D
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAI 609
Query: 576 LYHSAM 581
Y++ M
Sbjct: 610 TYNTLM 615
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 195/440 (44%), Gaps = 5/440 (1%)
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
+ L +D +I + P+ +T + ++ + K A +L+ ++ I + + + + G
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHG 372
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ KL + +++M S I D Y +++ + + G + LF E SR L
Sbjct: 373 FFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y L D K+G A +M + G+ + Y +LI E+ A E
Sbjct: 433 EVT---YTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L E +KG+ + + +V + G +E+ + +++ M+ A + +++ +
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ A K+ ++++ +G P VT+ ++N +C + + +++ M +KG +
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAI 609
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y++++ + + + +M+ +G P+ YN L+ H +A+NL++ L+KEM
Sbjct: 610 TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEM 669
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ P SY +I + + ++ + + E R +G V D I V + + +
Sbjct: 670 IEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDV 729
Query: 556 EELVKLLQDMKSEGTKLDER 575
E + L D E L+ER
Sbjct: 730 EITLNLC-DEAIEKCLLNER 748
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 115/233 (49%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++G+ A+K+ + + +G P + TY SII C+I +AEKV EM +
Sbjct: 298 TVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ 357
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
V Y++++ + K G +R A +M +K P+ Y +L+ G+ + +
Sbjct: 358 KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+ L+ EM R + PD+V+YTT+I Y +A E +NE G + G ++
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
K +++ +LL +M+ +G +L+ +Y+S +N + AG QA L + E
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 154/368 (41%), Gaps = 16/368 (4%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNE--AKKLPEFRPEKSTLKLLIRY 126
R+ Q +PD + + +HG K + A +++E +KK+ P+ T LI+
Sbjct: 352 REMMSQKIIPDNVVYTTLIHGFFKLGHVRT-ANKWFDEMLSKKIS---PDYITYTTLIQG 407
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA----RKFKIANTLLQVFITDG 182
Q K +L + + PD T + L+ +A F + N ++Q+ +T
Sbjct: 408 FGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPN 467
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ A + + +L + ++M+ G+ L+ Y ++ K G+ E+
Sbjct: 468 IVTYGALIDGLCKHGELDTANELL---DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK 524
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L E + +D + Y + D+ + G +A K ++M ++G+ + L+
Sbjct: 525 LMKEMEVAGIDPDAIT---YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMN 581
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
F + ++ + L EKG++ D L+ + + T + + M+N +
Sbjct: 582 GFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAP 641
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
++ G K R A +Y+++I +G +P +Y ++I + + +A ++F
Sbjct: 642 DSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELF 701
Query: 423 IEMQQKGF 430
EM+ G
Sbjct: 702 EEMRGHGL 709
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 126/293 (43%), Gaps = 11/293 (3%)
Query: 67 LNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKL---- 122
+N S H V + +G L D + D NE L E R + L +
Sbjct: 450 VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL--LDEMRKKGLQLNVCIYN 507
Query: 123 -LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
++ + ++ + + L ++ ++ + PDA T + ++ + R A+ LLQ +
Sbjct: 508 SMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDR 567
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G + ++ FN M G+ L M + M GIV D+ Y +M+ +
Sbjct: 568 GLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTT 627
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
++ +++ + ++ Y IL K+ EA +++M EKG + + Y +L
Sbjct: 628 TKIYKRMRNQGVAP---DSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
I F ++ A ELF+E G++ D E+ V M EEG VE TL++ +
Sbjct: 685 IKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCD 737
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 5/204 (2%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + + I S+A K+ ++ G VV S A + + + +
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGL---VVTVDSCNAFLSRIANNSEGIEM 244
Query: 457 VAKMKAK-GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
K+ + G N YN ++ R +++ +L +M+ R TPD VSY+TVI Y
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
E +K ++ ++ G +R ++ + K+ + E K+L++M S+ D
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364
Query: 576 LYHSAMNALRDAG-LQMQAQWLQQ 598
+Y + ++ G ++ +W +
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDE 388
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 218/448 (48%), Gaps = 11/448 (2%)
Query: 141 EDFKIYNVLPDAHTCSRLVASCVRARKFKIANT-LLQVFITDGEIALLAFNSAMGGYNKL 199
E + +LPD + L+ +A++ + A T L+++ + + + GY+K
Sbjct: 484 ERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKA 543
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
+ +M S G++ + G Y ++E + K G+ + ++F SR++
Sbjct: 544 GEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQ---DV 600
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
Y +L L ++G+ EA F +++EKG+L + Y SLI V A +L +E
Sbjct: 601 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 660
Query: 320 AEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSK 376
KG+ +P++ +L+ + G +E+ ++ + ++ L +C++ A+V+G+ K
Sbjct: 661 MCIKGI--NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLT-PNCVTYAAMVDGYCK 717
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ AA ++ E+++ +G P Y I+N C+ + KA +F EM +KGF V+
Sbjct: 718 SKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVS 776
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
+++++ Y K+G++++A L+ +M K PN Y SL+D + +A + + ++LW EM+
Sbjct: 777 FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQ 836
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
R V P +YT+++ Y+ + E G D+ +M+ + + +
Sbjct: 837 ERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVM 896
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNAL 584
E KL ++ +G + Y + + AL
Sbjct: 897 EACKLKDEILVKGMPMSVAAYDALIQAL 924
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/504 (20%), Positives = 216/504 (42%), Gaps = 39/504 (7%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CV--RARKFKIA 171
P T ++I L +++ D + L ++PD +T L+ C+ R+R+ K+
Sbjct: 248 PNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLM 307
Query: 172 ----------------NTLLQVFITDGEIA-----------------LLAFNSAMGGYNK 198
N L+ F+ G+I L+ +N+ + G K
Sbjct: 308 LLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCK 367
Query: 199 LHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFS 258
+ + ++M G+ DS Y ++E + + + + L E K RKL T +
Sbjct: 368 AGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLT 427
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
Y ++ + L + G R+M G+ + +Y +L+ + A V+ + + +
Sbjct: 428 ---YSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILE 484
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E+G+L D L++ + + +E+ + M +L+ + A ++G+SK
Sbjct: 485 RMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAG 544
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A + + +++S G +P Y ++I +C+ ++A VF + + + V YS
Sbjct: 545 EMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYS 604
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
++ + G++ +A + ++++ KG PN + YNSL+ + N+ + +L +EM +
Sbjct: 605 VLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIK 664
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ PD V+Y +I +A E + +++ G + MV + K
Sbjct: 665 GINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAA 724
Query: 559 VKLLQDMKSEGTKLDERLYHSAMN 582
+LL++M G D +Y+ +N
Sbjct: 725 FQLLEEMLLRGVPPDAFIYNVILN 748
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/483 (20%), Positives = 198/483 (40%), Gaps = 39/483 (8%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
EFRP + L+ L++ K + + + + VLPD +T + ++++ + K A
Sbjct: 175 EFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDA 234
Query: 172 N-TLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
LL++ L+ +N +GG + + I + M G+V D Y ++
Sbjct: 235 KRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILING 294
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
+ S + + LE L P + Y L D + G +A + +M GI
Sbjct: 295 FCMEKRSREAKLMLLEMIDVGLKPEPIT---YNALIDGFMRQGDIEQAFRIKDEMVACGI 351
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
+ I+ +L+ +++ A E+ +E EKG+ D + L+ + + + +
Sbjct: 352 EANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFE 411
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+++ MK KL P +TY+ IIN C
Sbjct: 412 LLDEMKKRKLA-----------------------------------PTVLTYSVIINGLC 436
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
R + EM G V Y++++ + K GR+ ++ ++ +M+ +G P+V+
Sbjct: 437 RCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVF 496
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YNSL+ +AK + + EM R++ P+ +Y I Y++A E ++ +++NE
Sbjct: 497 CYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM 556
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
G + + I ++ K + E + + + S D + Y ++ L G
Sbjct: 557 LSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKM 616
Query: 591 MQA 593
+A
Sbjct: 617 HEA 619
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/503 (20%), Positives = 216/503 (42%), Gaps = 23/503 (4%)
Query: 72 HHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI------- 124
Q +PD ++S + G K + +E A Y E + RP T I
Sbjct: 487 REQGILPDVFCYNSLIIGFCKAKRMEE-ARTYLMEMLE-RRLRPNAHTYGAFIDGYSKAG 544
Query: 125 RYLVQSKKWDSIVSLS--EDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
+ + ++ ++S + IY L + H V +F ++ +LQ T
Sbjct: 545 EMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT-- 602
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
++ + G ++ + ++ +++ G++ ++ Y ++ K G+ +K +
Sbjct: 603 ------YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 656
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L E + ++ + Y IL D L K+G A F D++ +G+ + YA+++
Sbjct: 657 LLEEMCIKGINPDIVT---YNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVD 713
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ A +L +E +G+ D + ++ +E EK LD+ + M
Sbjct: 714 GYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAS 773
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
+ + ++ G+ K A + E++I + IP VTY S+I+ C+ + +A++++
Sbjct: 774 TVSFN-TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLW 832
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
+EMQ++ Y+S++ Y G + + L +M AKG EP+ Y ++D + R
Sbjct: 833 LEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCRE 892
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
N+ + KL E+ + + +Y +I A + EF +K NE +G +
Sbjct: 893 GNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTC 952
Query: 543 GIMVGVFSKLSQIEELVKLLQDM 565
++ F ++E ++L+ M
Sbjct: 953 SVIARGFQIAGNMDEAAEVLRSM 975
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/418 (20%), Positives = 166/418 (39%), Gaps = 7/418 (1%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVS 138
D + + +HG+ ++ + E A+ ++E ++ P T LI + D
Sbjct: 599 DVQTYSVLIHGLSRNGKMHE-AFGIFSELQE-KGLLPNAFTYNSLISGSCKQGNVDKASQ 656
Query: 139 LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYN 197
L E+ I + PD T + L+ +A + + A L G + + + + GY
Sbjct: 657 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 716
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
K + + E+M G+ D+ Y I+ K EK LF E L+
Sbjct: 717 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQE----MLEKGFA 772
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
ST + L + KSG+ EA +M EK + + Y SLI + A+ L+
Sbjct: 773 STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLW 832
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E +E+ ++ + L+ Y G + + + E M ++ +++ + +
Sbjct: 833 LEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCRE 892
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A K+ ++++ +G Y ++I A C+ + + K+ E+ + GF +
Sbjct: 893 GNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTC 952
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
S + + G + +A ++ M G N L+D + N + L K+M
Sbjct: 953 SVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 101/232 (43%), Gaps = 5/232 (2%)
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
SD I C I N S + VK Y S P V + ++++Y ++ +A VF
Sbjct: 112 SDLIKCIIRNSDSPLAVLGSIVKCYR---SCNGSPNSVIFDMLMDSYRKMGFLVEAVNVF 168
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV-AKMKAKGCEPNVWIYNSLMDMHGR 481
+ + F +++ +S++ K ++ + W V M A P+V+ Y +++ H +
Sbjct: 169 LGPKNFEFRPSLLSCNSLLGDLLKGNKV-ELFWKVFDGMCAHKVLPDVYTYTNMISAHCK 227
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
N++ +++ EM + +P+ V+Y +I RAR D ++ G V D
Sbjct: 228 VGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYT 287
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
I++ F + E +L +M G K + Y++ ++ G QA
Sbjct: 288 YDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 339
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 206/474 (43%), Gaps = 6/474 (1%)
Query: 108 KKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
++ +P S + ++ + K + +++SLS+ + D +T + ++ S
Sbjct: 63 NRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHL 122
Query: 166 RKFKIANTLL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
+ ++L ++F + F + + G + +++KM G + Y
Sbjct: 123 NRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTY 182
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
++ K+G+S L + + + Y + D L K + EAL F +
Sbjct: 183 GTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVIT---YNTIIDCLFKDRQVNEALNIFSE 239
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M KGI + S Y S+I +E K L E + ++ + + LV +EG+
Sbjct: 240 MIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGM 299
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V DVV+ M ++ A+++G R A KV++ ++ +GC P ++Y++
Sbjct: 300 VTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYST 359
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+IN YC+I KA +F EM Q+ +V Y++++ GR+RDA+ L +M A G
Sbjct: 360 LINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASG 419
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
P++ Y L+D + ++L Q + K +E + PD SY VI R E +
Sbjct: 420 QIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAG 479
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
++ G D IM+ + E KL ++M ++G D+ Y+
Sbjct: 480 DLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYN 533
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 151/387 (39%), Gaps = 10/387 (2%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNE--AKKLPEFRPEKSTLKL 122
I L R + P+ +++ + + KD Q E A + ++E AK + P ST
Sbjct: 199 IRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNE-ALNIFSEMIAKGI---SPNVSTYNS 254
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
+I L + +W + +L + ++P+ + LV + + IA+ ++ V I G
Sbjct: 255 IIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRG 314
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
E ++ + + M G+ V++ M G + Y ++ Y KI +K
Sbjct: 315 VEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAM 374
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E R+L + Y L L GR +A+ F +M G + D Y L+
Sbjct: 375 YLFEEMCQRELVPNIVT---YNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILL 431
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ A + K E + D + ++ G +E D+ S+ + L
Sbjct: 432 DYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLH 491
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
++NG + A K++ ++ + GC P TY I + R A ++
Sbjct: 492 PDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQL 551
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTG 448
EM +GF + +V M G
Sbjct: 552 LQEMLGRGFSADASTITLIVEMLSDDG 578
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 93/488 (19%), Positives = 181/488 (37%), Gaps = 53/488 (10%)
Query: 72 HHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLP------------EFRPEKST 119
H+ T + +K+ DS G+ D T + + + ++ +P+ +T
Sbjct: 89 HYSTVLSLSKQMDSL--GIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTAT 146
Query: 120 LKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
LIR L K + L + P+ T L+ + + A LL+ +
Sbjct: 147 FTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMV 206
Query: 180 T-DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE 238
+ E ++ +N+ + K + ++ +M + GI + Y I+ K + +
Sbjct: 207 QKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWK 266
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
VA L E K+ P + ++ L D+L K G A M ++G+ D Y
Sbjct: 267 HVATLMNEMVDSKI--MP-NVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYT 323
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
+L+ +E+ A+++F KG + L+ Y + ++K + + E M
Sbjct: 324 ALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQR 383
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY---------------- 402
+L + +++G A+ ++ ++++ G IP VTY
Sbjct: 384 ELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQA 443
Query: 403 -------------------ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+I+ CR+ A +F + KG V Y+ M+
Sbjct: 444 MAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMING 503
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
G + +A L +M GC P+ YN + R +L +EM R + D
Sbjct: 504 LCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSAD 563
Query: 504 KVSYTTVI 511
+ T ++
Sbjct: 564 ASTITLIV 571
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 91/231 (39%), Gaps = 4/231 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + LI + ++ D + L E+ ++P+ T + L+ + + A L
Sbjct: 352 PNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIAL 411
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ G+I L+ + + K + + + ++ + + D Y +++ +
Sbjct: 412 FHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCR 471
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G+ E LF S+ L ++ Y I+ + L G EA K FR+M G D
Sbjct: 472 VGELEAAGDLFSSLSSKGLHPDVWT---YTIMINGLCLQGLLAEATKLFREMNTDGCSPD 528
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
Y + F E A +L +E +G D +V M ++GL
Sbjct: 529 DCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGL 579
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 173/381 (45%), Gaps = 3/381 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V +M S I+ D+ Y ++ ++K+G F E S+K+ S + T Y L
Sbjct: 350 VLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKI-SPDYIT--YTTLIQ 406
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
G+ G+ E F +M +G+ D Y +LI + E+ A L E + GM
Sbjct: 407 GFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP 466
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ L+ + G ++ ++++ M+ L+++ CI ++VNG K A+K+
Sbjct: 467 NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLM 526
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++ G P +TY ++I+AYCR+ KA K+ EM +G VV ++ ++ +
Sbjct: 527 KEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCML 586
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G + D L+ M KG P+ YN+LM H ++ K++K M + V PD +Y
Sbjct: 587 GMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTY 646
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+I + +AR Y E G V ++ F K + E +L ++M+
Sbjct: 647 NILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRG 706
Query: 568 EGTKLDERLYHSAMNALRDAG 588
G D +Y+ ++ + G
Sbjct: 707 HGLVADGEIYNFFVDMCYEEG 727
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 169/366 (46%), Gaps = 3/366 (0%)
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
GI ++ Y I+ + ++G ++ L ++ R STP Y + D G
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRS--STP-DVVSYSTVIDGYCHLGEL 309
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
+ALK DM+ KG+ + Y S+I I + AE++ +E + ++ D V L
Sbjct: 310 KKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL 369
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ + + G V + M + K+ ++ GF + ++ ++IS+G
Sbjct: 370 IHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGL 429
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P +VTY ++I+ YC+ A + EM Q G +V Y +++ K G + A
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L+ +M+ KG + NV IYNS+++ +A N+ Q KL KEME + PD ++YTTVI AY
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
R + D K E G +++ F L +E+ +LL M +G D
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAI 609
Query: 576 LYHSAM 581
Y++ M
Sbjct: 610 TYNTLM 615
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/440 (21%), Positives = 196/440 (44%), Gaps = 5/440 (1%)
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
+ L +D +I + P+ +T + ++ + K A +L+ ++ I + + + + G
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHG 372
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ KL + +++M S I D Y +++ + + G + LF E SR L
Sbjct: 373 FFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y L D K+G A +M + G+ + Y +LI E+ A E
Sbjct: 433 EVT---YTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L E +KG+ + + +V + G +E+ + +++ M+ A + +++ +
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ A K+ ++++ +G P VT+ ++N +C + + +++ M +KG +
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAI 609
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y++++ + + + +M+ +G P+ YN L+ H +A+NL++ L+KEM
Sbjct: 610 TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEM 669
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ P SY +I + + R+F + + E R +G V D I V + + +
Sbjct: 670 IEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDV 729
Query: 556 EELVKLLQDMKSEGTKLDER 575
E + L D E L+ER
Sbjct: 730 EITLNLC-DEAIEKCLLNER 748
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 115/233 (49%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++G+ A+K+ + + +G P + TY SII C+I +AEKV EM +
Sbjct: 298 TVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ 357
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
V Y++++ + K G +R A +M +K P+ Y +L+ G+ + +
Sbjct: 358 KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+ L+ EM R + PD+V+YTT+I Y +A E +NE G + G ++
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
K +++ +LL +M+ +G +L+ +Y+S +N + AG QA L + E
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 155/368 (42%), Gaps = 16/368 (4%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNE--AKKLPEFRPEKSTLKLLIRY 126
R+ Q +PD + + +HG K + A +++E +KK+ P+ T LI+
Sbjct: 352 REMMSQKIIPDNVVYTTLIHGFFKLGHVRT-ANKWFDEMLSKKIS---PDYITYTTLIQG 407
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA----RKFKIANTLLQVFITDG 182
Q K +L + + PD T + L+ +A F + N ++Q+ +T
Sbjct: 408 FGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPN 467
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ A + + +L + ++M+ G+ L+ Y ++ K G+ E+
Sbjct: 468 IVTYGALIDGLCKHGELDTANELL---DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK 524
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L E + +D + Y + D+ + G +A K ++M ++G+ + L+
Sbjct: 525 LMKEMEVAGIDPDAIT---YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMN 581
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
F + ++ + L EKG++ D L+ + + T + + M+N +
Sbjct: 582 GFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAP 641
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
++ G K R A +Y+++I +G +P +Y ++I + + + +A ++F
Sbjct: 642 DSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELF 701
Query: 423 IEMQQKGF 430
EM+ G
Sbjct: 702 EEMRGHGL 709
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 125/293 (42%), Gaps = 11/293 (3%)
Query: 67 LNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKL---- 122
+N S H V + +G L D + D NE L E R + L +
Sbjct: 450 VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL--LDEMRKKGLQLNVCIYN 507
Query: 123 -LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
++ + ++ + + L ++ ++ + PDA T + ++ + R A+ LLQ +
Sbjct: 508 SMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDR 567
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G + ++ FN M G+ L M + M GIV D+ Y +M+ +
Sbjct: 568 GLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTT 627
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
++ +++ + ++ Y IL K+ EA +++M EKG + + Y +L
Sbjct: 628 TKIYKRMRNQGVAP---DSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
I F + A ELF+E G++ D E+ V M EEG VE TL++ +
Sbjct: 685 IKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCD 737
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 5/204 (2%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + + I S+A K+ ++ G VV S A + + + +
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGL---VVTVDSCNAFLSRIANNSEGIEM 244
Query: 457 VAKMKAK-GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
K+ + G N YN ++ R +++ +L +M+ R TPD VSY+TVI Y
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
E +K ++ ++ G +R ++ + K+ + E K+L++M S+ D
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364
Query: 576 LYHSAMNALRDAG-LQMQAQWLQQ 598
+Y + ++ G ++ +W +
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDE 388
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 133/575 (23%), Positives = 245/575 (42%), Gaps = 75/575 (13%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A+ +++E K P+ T +I L ++++ D V L E+ +P + +
Sbjct: 289 DMAWKFFHELKS-QGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNT 347
Query: 158 LVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMK--- 213
++ KF A +LL+ G I +++A+N + + + + E MK
Sbjct: 348 MIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA 407
Query: 214 -----SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----------CKSRKLDS--- 254
S I++D C +EA K+ DS K A LF CK+++LD
Sbjct: 408 APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACS 467
Query: 255 ----------TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--- 301
TP S + L D LG+ G+ +A + M + G + +Y SLI
Sbjct: 468 IFLGLDHKVCTPDSV-TFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNF 526
Query: 302 ---------------------------------CSFASITEVKLAEELFKEAEEKGMLRD 328
C F + E++ LF+E + +G+ D
Sbjct: 527 FKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKA-GEIEKGRALFEEIKAQGLTPD 585
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ ++ G + T + MK L + +++GF K A ++ E
Sbjct: 586 VRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLE 645
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ ++G P VTY S+I+ +I +A +F E + K D VV YSS++ +GK G
Sbjct: 646 EMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVG 705
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
RI +A ++ ++ KG PN + +N L+D +A+ + + ++ M+ K P++V+Y+
Sbjct: 706 RIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYS 765
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+++ + R+F+ F+ E + G + M+ +++ + E L + KS
Sbjct: 766 IMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSS 825
Query: 569 GTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
G D Y++ + L +A M A L FE T
Sbjct: 826 GGIPDSACYNAMIEGLSNANKAMDAYIL---FEET 857
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/508 (21%), Positives = 212/508 (41%), Gaps = 52/508 (10%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-D 181
L+ + +++ + + + E+ + P +TC +VAS V++RK + A +++
Sbjct: 138 LLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFK 197
Query: 182 GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
A A+ + +G + H + + +M+ G + + ++ + + G +
Sbjct: 198 FRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAAL 257
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
+L E KS ++ +Y + D GK G+ A KFF ++K +G++ D + S+I
Sbjct: 258 SLLDEMKSNSFNA---DLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMI 314
Query: 302 CSFASITEVKLAEELFKEAEEKGML----------------------------RDPEVCL 333
V A ELF+E + + + + C+
Sbjct: 315 GVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCI 374
Query: 334 KLVLMYI-------EEGLVEKTLDVVESMK-NAKLKISDCISCAIVNGFSKRRGYWAAVK 385
V+ Y +G VE+ L ++E+MK +A ++ +++ K AA+K
Sbjct: 375 PSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTS--YNILIDMLCKAGELEAALK 432
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
V + + G P +T +I+ C+ +A +F+ + K V + S++ G
Sbjct: 433 VQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLG 492
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+ G++ DA L KM G PN +Y SL+ + K++KEM R +PD +
Sbjct: 493 RHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLM 552
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR-----AIAGIMVGVFSKLSQIEELVK 560
+ +A E + + E + G D I G++ G FSK + K
Sbjct: 553 LLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSK-----DTYK 607
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAG 588
L +MK +G LD R Y+ ++ +G
Sbjct: 608 LFYEMKEQGLHLDTRAYNIVIDGFCKSG 635
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/256 (18%), Positives = 115/256 (44%), Gaps = 6/256 (2%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
Q PD + + +HG++K +++ Y + E K+ + ++I +S K
Sbjct: 580 QGLTPDVRSYSILIHGLVKGGFSKD-TYKLFYEMKE-QGLHLDTRAYNIVIDGFCKSGKV 637
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
+ L E+ K + P T ++ + + A L + + ++ ++ ++S
Sbjct: 638 NKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSL 697
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G+ K+ L+ E++ G+ ++ + +++A K + ++ F K+ K
Sbjct: 698 IDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLK- 756
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
P + Y I+ + L K + +A F+++M+++G+ + Y ++I A + V
Sbjct: 757 --CPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLE 814
Query: 313 AEELFKEAEEKGMLRD 328
A++LF+ + G + D
Sbjct: 815 AKDLFERFKSSGGIPD 830
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 201/471 (42%), Gaps = 18/471 (3%)
Query: 108 KKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
++ RP S + L+ + + K + +++SL + + + + +T + L+ S
Sbjct: 43 NRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHL 102
Query: 166 RKFKIANTLLQVFITDGEIALLAFNSAMGGYNKL-------HMYYSTILVYEKMKSAGIV 218
+ A ++L G+I L + + + L + +++KM G
Sbjct: 103 NRLGFAFSVL------GDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQ 156
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
D Y ++ K+G++ + R T +Y + DSL K + EA
Sbjct: 157 PDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVV---VYSTIIDSLCKDRQLTEA 213
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
L F DM KGI + Y+SLI + K A LF + ++ D LV
Sbjct: 214 LSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDA 273
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+EG+V K VV+ M + LK ++++G R V V++ ++ +GC+P
Sbjct: 274 LCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPS 333
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
++Y ++IN YC+I + KA +F EM Q+G V Y++++ GR+RDA+ L
Sbjct: 334 VISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 393
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M G P++ Y L D + L + L K +E + PD Y+ V+ RA
Sbjct: 394 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 453
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
E + +++ G D IM+ + + E KL +M G
Sbjct: 454 ELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENG 504
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 165/413 (39%), Gaps = 59/413 (14%)
Query: 202 YYSTIL-VYEKMKSAGI---------VLDSGCYCQIME-AYYKIGDSEKVAALFLECKSR 250
+YST+L +Y++M S GI +++S C+ + A+ +GD
Sbjct: 69 HYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDI------------L 116
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
KL P ST + L L G+ EAL+ F M +G D Y +LI +
Sbjct: 117 KLGYQP-STATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNT 175
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A + E++ C V++Y I
Sbjct: 176 STAIRFLRSMEQRN-------CRPTVVVY----------------------------STI 200
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++ K R A+ ++ ++++G P TY+S+I+ C + + +A ++F M +
Sbjct: 201 IDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKI 260
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+ ++++V K G + A ++V M +P+V YNSLMD H + +
Sbjct: 261 MPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVN 320
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
++ M R+ P +SYTT+I+ Y + + D + + E G + D ++
Sbjct: 321 VFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLC 380
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
+ ++ + + L +M G D Y + L +A L + EGT
Sbjct: 381 HVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGT 433
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 219/467 (46%), Gaps = 8/467 (1%)
Query: 121 KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
KLL + + +D ++SLS+ ++ + P+ +T S + + ++ + ++L I
Sbjct: 97 KLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIK 156
Query: 181 DG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
G + ++ F + + G K+ + + +++ M + G D Y I+ KIG++
Sbjct: 157 LGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAA 216
Query: 240 VAALFLECKSRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
A L +K++ +M Y L DSL + EAL F MK KGI D Y
Sbjct: 217 AAGLL-----KKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTY 271
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
SLI + K A L E ++ D LV + +EG V + L V+++M
Sbjct: 272 TSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTE 331
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
++ + +++ G+S A K++ +I++GC P +Y +IN YC+ +
Sbjct: 332 MGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDE 391
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A ++F EM +G V+Y++++ + + G++R+A L M G P+++ Y+ L+D
Sbjct: 392 AMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLD 451
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ L + +L++ M+ + P+ V YT ++ A ++ K ++E + G
Sbjct: 452 GFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQP 511
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ ++ K ++E ++ ++M+++G DE Y+ + L
Sbjct: 512 HVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGL 558
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 182/419 (43%), Gaps = 18/419 (4%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEK-MKSAGIVLD-------SGCYCQIMEAYYKIGDS 237
++ F + K+ YY ++ K M+ G+ + C+CQ+
Sbjct: 92 IIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVL 151
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
KV L L+ P + + L + L K G +A++ F DM KG D Y
Sbjct: 152 AKVIKLGLQ---------P-TIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTY 201
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++I I E A L K+ EE G + L+ + LV + LD+ MK
Sbjct: 202 NTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKA 261
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ +++ G K + A + ++ S +P VT+ +++ +C+ S+
Sbjct: 262 KGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSE 321
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A V M + G + VV YSS++ Y + +A L M KGC+PN++ YN L++
Sbjct: 322 ALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILIN 381
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ +AK + + +L+ EM + +TP+ VSY T+I + + + + NG +
Sbjct: 382 GYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLP 441
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
D I++ F K + + +L + M+S K + +Y ++A+ +G A+ L
Sbjct: 442 DLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKL 500
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 112/231 (48%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
I+NG K AA + +++ GC P VTY+++I++ CR L ++A +F M+ K
Sbjct: 203 TIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAK 262
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G + Y+S++ K R ++A L+ +M + P++ +N L+D + + +
Sbjct: 263 GISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEA 322
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+ K M V P+ V+Y++++ Y+ + K ++ G + I++
Sbjct: 323 LGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILING 382
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
+ K +I+E ++L +M +G + Y++ ++ G +AQ L +N
Sbjct: 383 YCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRN 433
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 91/224 (40%), Gaps = 4/224 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P + +LI ++K+ D + L + + P+ + + L+ + K + A
Sbjct: 370 KPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQD 429
Query: 174 LLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L + T+G + L ++ + G+ K ++ M+S + + Y ++ A
Sbjct: 430 LFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMC 489
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K G+ + LF E + L +Y + + L K G EAL+ FR+M+ G
Sbjct: 490 KSGNHKDARKLFSELFVQGLQP---HVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPP 546
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
D Y +I + A L E ++G + D CL V
Sbjct: 547 DEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVRPCLSEV 590
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 213/436 (48%), Gaps = 11/436 (2%)
Query: 141 EDFKIYNVLPDAHTCSRLVASCVRARKFKIANT-LLQVFITDGEIALLAFNSAMGGYNKL 199
E + +LPD + L+ +A++ + A T L+++ + + + GY+K
Sbjct: 475 ERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKA 534
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
+ +M S G++ + G Y ++E + K G+ + ++F SR++
Sbjct: 535 GEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQ---DV 591
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
Y +L L ++G+ EA F +++EKG+L + Y SLI V A +L +E
Sbjct: 592 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 651
Query: 320 AEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSK 376
KG+ +P++ +L+ + G +E+ ++ + ++ L +C++ A+V+G+ K
Sbjct: 652 MCIKGI--NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL-TPNCVTYAAMVDGYCK 708
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ AA ++ E+++ +G P Y I+N C+ + KA +F EM +KGF V+
Sbjct: 709 SKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVS 767
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
+++++ Y K+G++++A L+ +M K PN Y SL+D + +A + + ++LW EM+
Sbjct: 768 FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQ 827
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
R V P +YT+++ Y+ + E G D+ +M+ + + +
Sbjct: 828 ERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVM 887
Query: 557 ELVKLLQDMKSEGTKL 572
E KL ++ +G +
Sbjct: 888 EACKLKDEILVKGMPM 903
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/518 (20%), Positives = 221/518 (42%), Gaps = 39/518 (7%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
IEL R + VPD +D ++G + +++E KL++
Sbjct: 261 IELKRSMVDKGLVPDLYTYDILINGFCMEKRSREA---------------------KLML 299
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
++ V L + YN L D + + F+I + ++ I E
Sbjct: 300 LEMID-------VGLKPEPITYNALIDGFMRQGDIE-----QAFRIKDEMVACGI---EA 344
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
L+ +N+ + G K + + ++M G+ DS Y ++E + + + + L
Sbjct: 345 NLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELL 404
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E K RKL T + Y ++ + L + G R+M G+ + +Y +L+ +
Sbjct: 405 DEMKKRKLAPTVLT---YSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH 461
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
A V+ + + + E+G+L D L++ + + +E+ + M +L+ +
Sbjct: 462 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 521
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
A ++G+SK A + + +++S G +P Y ++I +C+ ++A VF
Sbjct: 522 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF 581
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+ + + V YS ++ + G++ +A + ++++ KG PN + YNSL+ + N
Sbjct: 582 ILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGN 641
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+ + +L +EM + + PD V+Y +I +A E + +++ G +
Sbjct: 642 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 701
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
MV + K +LL++M G D +Y+ +N
Sbjct: 702 MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILN 739
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 191/427 (44%), Gaps = 22/427 (5%)
Query: 185 ALLAFNSAMGGY---NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+LL+ NS +G NK+ +++ V++ M + ++ D Y ++ A+ K+G+ +
Sbjct: 188 SLLSCNSLLGDLLKGNKVELFWK---VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAK 244
Query: 242 ALFLEC--KSRKLDS-------------TPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
+ LE K+R LD P + Y IL + R+ EA +M
Sbjct: 245 RVLLEMGEKARLLDEAIELKRSMVDKGLVP-DLYTYDILINGFCMEKRSREAKLMLLEMI 303
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
+ G+ +P Y +LI F +++ A + E G+ + + L+ + G +E
Sbjct: 304 DVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKME 363
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
K L++++ M ++ ++ G + + A ++ +++ + P +TY+ II
Sbjct: 364 KALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVII 423
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
N CR + EM G V Y++++ + K GR+ ++ ++ +M+ +G
Sbjct: 424 NGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGIL 483
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+V+ YNSL+ +AK + + EM R++ P+ +Y I Y++A E ++ ++
Sbjct: 484 PDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRY 543
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+NE G + + I ++ K + E + + + S D + Y ++ L
Sbjct: 544 FNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSR 603
Query: 587 AGLQMQA 593
G +A
Sbjct: 604 NGKMHEA 610
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 104/511 (20%), Positives = 219/511 (42%), Gaps = 25/511 (4%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
EFRP + L+ L++ K + + + + VLPD +T + ++++ + K A
Sbjct: 184 EFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDA 243
Query: 172 NTLL-----QVFITDGEIALLAFNSAMGGYNKLHMYYSTI-------------LVYEKMK 213
+L + + D I L G L+ Y I L+ +M
Sbjct: 244 KRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMI 303
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
G+ + Y +++ + + GD E+ + E + +++ ++ L + + K+G
Sbjct: 304 DVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLI---IWNTLLNGVCKAG 360
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
+ +AL+ ++M EKG+ D Y+ LI + A EL E +++ + P V
Sbjct: 361 KMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLA--PTVLT 418
Query: 334 KLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
V++ G ++ T ++ M LK + + ++ +K + + E++
Sbjct: 419 YSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMR 478
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
QG +P Y S+I +C+ +A +EM ++ Y + + Y K G +
Sbjct: 479 EQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEME 538
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
A +M + G PNV IY +L++ H + N+ + +++ + R+V D +Y+ +I
Sbjct: 539 IADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLI 598
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+R + ++E + G + + ++ K +++ +LL++M +G
Sbjct: 599 HGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGIN 658
Query: 572 LDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
D Y+ ++ L AG +A+ L + EG
Sbjct: 659 PDIVTYNILIDGLCKAGEIERAKNLFDDIEG 689
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 5/248 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD ++ + G+ K + E A + +++ + P T ++ +SK +
Sbjct: 659 PDIVTYNILIDGLCKAGEI-ERAKNLFDDIEGRG-LTPNCVTYAAMVDGYCKSKNPTAAF 716
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
L E+ + V PDA + ++ C + KF+ A L Q + G + ++FN+ + GY
Sbjct: 717 QLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYC 776
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
K + E+M + + Y +++ K G + L+LE + R + T
Sbjct: 777 KSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPT-- 834
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
Y L G E F +M KGI D Y +I ++ V A +L
Sbjct: 835 -AKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLK 893
Query: 318 KEAEEKGM 325
E KGM
Sbjct: 894 DEILVKGM 901
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/565 (22%), Positives = 243/565 (43%), Gaps = 72/565 (12%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A+ +++E K P+ T LI L ++++ D V L E+ + +P + +
Sbjct: 290 DMAWKFFHEMKA-QGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNT 348
Query: 158 LVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMK--- 213
++ A KF A +LL+ G I +++A+N + + + ++++M+
Sbjct: 349 MIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA 408
Query: 214 -----SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----------CKSRKLDS--- 254
+ I++D C +EA K+ D+ K A LF CK++KLD
Sbjct: 409 APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACS 468
Query: 255 ----------TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--- 301
+P + + L D LG+ GR +A + M + + + +Y SLI
Sbjct: 469 IFLGLDHKVCSP-DSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNF 527
Query: 302 ---------------------------------CSFASITEVKLAEELFKEAEEKGMLRD 328
C F + EV+ LF+E + +G++ D
Sbjct: 528 FKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKA-GEVEKGRALFEEIKAQGLVPD 586
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ ++ G +T + MK L + +++GF K A ++ E
Sbjct: 587 VRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLE 646
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ ++G P VTY S+++ +I +A +F E + G D VV YSS++ +GK G
Sbjct: 647 EMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVG 706
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
RI +A ++ ++ KG PN + +N L+D +A+ + + + ++ M+ K +P+ ++Y+
Sbjct: 707 RIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYS 766
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I+ R+F+ F+ E + G + M+ +K + E L K+
Sbjct: 767 IMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKAS 826
Query: 569 GTKLDERLYHSAMNALRDAGLQMQA 593
G D Y++ + L A M A
Sbjct: 827 GGVPDSACYNAMIEGLSSANKAMDA 851
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 147/332 (44%), Gaps = 1/332 (0%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
S H+ L S KS + EA M++ S Y +LI + ++ L
Sbjct: 166 LSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTL 225
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F + +E G + + LV ++ EG ++ L +++ MK+ + ++ F K
Sbjct: 226 FHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGK 285
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A K + ++ +QG +P VTY ++I C+ +A ++F E+ CV A
Sbjct: 286 VGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYA 345
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++M+ YG G+ +A L+ + K KGC P+V YN ++ GR + + ++ EM
Sbjct: 346 YNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM- 404
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
R+ P+ +Y +I +A E + +K + + G + IM+ K +++
Sbjct: 405 RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLD 464
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E + + + D R + S ++ L G
Sbjct: 465 EACSIFLGLDHKVCSPDSRTFCSLIDGLGRRG 496
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/461 (21%), Positives = 198/461 (42%), Gaps = 5/461 (1%)
Query: 142 DFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALL-AFNSAMGGYNKLH 200
+ K ++PD T + L+ +AR+ A L + + + + A+N+ + GY
Sbjct: 298 EMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAG 357
Query: 201 MYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH 260
+ + E+ K G + Y I+ + G E+ + E + D+ P T
Sbjct: 358 KFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ---DAAPNLT- 413
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
Y IL D L K+G ALK MKE G+ + +I ++ A +F
Sbjct: 414 TYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGL 473
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
+ K D L+ G V+ + E M ++ + + +++ F K
Sbjct: 474 DHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRK 533
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
K+Y++++ +GC P + S ++ + K +F E++ +G V +YS +
Sbjct: 534 EDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSIL 593
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ K G R+ L +MK +G +V YN+++D ++ + + +L +EM+ + +
Sbjct: 594 IHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGL 653
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
P V+Y +V+ + D + E + G ++ I ++ F K+ +I+E
Sbjct: 654 QPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYL 713
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+L+++ +G + ++ ++AL A +AQ QN +
Sbjct: 714 ILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMK 754
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 118/569 (20%), Positives = 226/569 (39%), Gaps = 79/569 (13%)
Query: 89 GMLKDPQTQELAYDYYN--EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIY 146
G++K + +A+ Y+ E K PE L++ + +++ D + + E+ +
Sbjct: 105 GVMKRLKDVNVAFQYFRWVERKTQQAHCPEVYNAFLMV--MARTRNLDYLEQILEEMSVA 162
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQV------------FIT-----------DGE 183
H LVAS V++ K K A ++++ + T D
Sbjct: 163 GFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPM 222
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVY-------------EKMKSAGIVLDSGCYCQIMEA 230
+ L +G +H++ + + V+ ++MKS D Y ++
Sbjct: 223 LTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDC 282
Query: 231 YYKIGDSEKVAALFLE--------------------CKSRKLD-------------STPF 257
+ K+G + F E CK+R+LD S P
Sbjct: 283 FGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVP- 341
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ Y + G +G+ EA K KG + PS+ A C + EE
Sbjct: 342 CVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCI--PSVIA-YNCILTCLGRKGKVEEAL 398
Query: 318 KEAEEKGMLRDPEVCLKLVL--MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ +E P + +L M + G +E L V ++MK A L + +++
Sbjct: 399 RIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLC 458
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K + A ++ L + C P T+ S+I+ R A ++ +M VV
Sbjct: 459 KAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVV 518
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+S++ + K GR D + +M +GC P++ + NS MD +A + + L++E+
Sbjct: 519 VYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEI 578
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + + PD SY+ +I +A K + E + G +D ++ F K ++
Sbjct: 579 KAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKV 638
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ +LL++MK++G + Y S ++ L
Sbjct: 639 DKAYQLLEEMKTKGLQPTVVTYGSVVDGL 667
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 110/256 (42%), Gaps = 6/256 (2%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
Q VPD + + +HG++K ++E Y + E K+ + +I +S K
Sbjct: 581 QGLVPDVRSYSILIHGLVKAGFSRE-TYKLFYEMKE-QGLHLDVLAYNTVIDGFCKSGKV 638
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
D L E+ K + P T +V + + A L + + G ++ ++ ++S
Sbjct: 639 DKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSL 698
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G+ K+ L+ E++ G+ +S + +++A K + ++ F K+ K
Sbjct: 699 IDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKC 758
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
+ Y I+ + L + +A F+++M+++G+ + Y ++I A V
Sbjct: 759 SPNAMT---YSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVME 815
Query: 313 AEELFKEAEEKGMLRD 328
A LF + G + D
Sbjct: 816 ARGLFDRFKASGGVPD 831
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/511 (22%), Positives = 226/511 (44%), Gaps = 6/511 (1%)
Query: 85 SFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFK 144
S + G+ ++ Q + A + +N ++ FRP+ T+ +++R L + + ++ L + +
Sbjct: 51 SIMKGLGREGQWNK-ALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLR 109
Query: 145 IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYY 203
D + + L+++ R RKFK A + G + +L+ +N + Y K +
Sbjct: 110 EEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSW 169
Query: 204 STIL-VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMY 262
IL ++E+MK+ GI D Y + A E+ LF + KS + TP Y
Sbjct: 170 ENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSS--NCTPDRV-TY 226
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
L D GK+G EA ++M+ G L + Y L+ +F A E+
Sbjct: 227 NALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVS 286
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
KG+ D L+ Y G VE+ +++ M+ + + A++ K + +
Sbjct: 287 KGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSE 346
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
+ ++E + + G P VT+ S++ A+ + +YS+ KVF M++ GF+ ++ ++
Sbjct: 347 MMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIE 406
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
YG+ G A+ + M GC P++ +N+L+ R E + E+ R P
Sbjct: 407 AYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKP 466
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ ++Y +++ AY E + + + + + V V+SK S ++E
Sbjct: 467 NDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAF 526
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
M+ G D +++ ++ G+ +A
Sbjct: 527 LAMRHHGYLSDTSTFNAMISMYGKKGMMDKA 557
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/577 (20%), Positives = 234/577 (40%), Gaps = 77/577 (13%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR-YLVQSKKWDSIV 137
D + S + + ++ + +E A ++ + K+ +P T ++I Y + + W++I+
Sbjct: 116 DVYAYTSLISALSRNRKFKE-ALGFFEQMKEAGP-QPSLVTYNVIIDLYGKKGRSWENIL 173
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGGY 196
L E+ K + PD +T + + +C + A L Q+ ++ + +N+ + Y
Sbjct: 174 ELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVY 233
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K Y V ++M+SAG + + Y +++ A+ + G A + S+ ++
Sbjct: 234 GKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDV 293
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
F+ Y L + ++G+ +A++ + M+ + + +LI +
Sbjct: 294 FT---YTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVI 350
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F++ + G+ D L+ + + G+ + L V MK A + ++ + +
Sbjct: 351 FEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGR 410
Query: 377 RRGYWAAVKVYEQLISQGCI-----------------------------------PGQVT 401
A+ +Y+ ++ GC P +
Sbjct: 411 CGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIA 470
Query: 402 YASIINAYCR-----------------------------IALYSK------AEKVFIEMQ 426
YAS+++AY + +YSK AE F+ M+
Sbjct: 471 YASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMR 530
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
G+ +++M++MYGK G + A A +++ G EP+V YN LM M+GR R
Sbjct: 531 HHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYR 590
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ E +E TPD VSY TVI +Y++ + + ++E NG D V
Sbjct: 591 KCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFV 650
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
G + E + +++ M G K DE Y + ++A
Sbjct: 651 GCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDA 687
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/429 (20%), Positives = 184/429 (42%), Gaps = 4/429 (0%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILV 208
PD T + L+++ RA K + A + Q+ ++ FN+ +G + K + +++
Sbjct: 291 PDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVI 350
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+E M++ G+ D + ++ A+ K G +V +F K + + + IL ++
Sbjct: 351 FEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKAT---FNILIEA 407
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
G+ G + +AL + M + G D + + +L+ + A + AE + E +
Sbjct: 408 YGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPN 467
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
++ Y G +EK ++V+++ + + + V +SK A +
Sbjct: 468 DIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFL 527
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+ G + T+ ++I+ Y + + KA F ++ G + VV Y+ ++ MYG+ G
Sbjct: 528 AMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREG 587
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
R + + A G P++ YN+++ + + L +++ EM + PD +Y
Sbjct: 588 MYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYN 647
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
T + Y F + G D +V + K+ + EE+ ++L+ +KS
Sbjct: 648 TFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSS 707
Query: 569 GTKLDERLY 577
+ Y
Sbjct: 708 DPNFSKAAY 716
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/445 (20%), Positives = 181/445 (40%), Gaps = 44/445 (9%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T L+ ++ K + + + + N P++ T + L+ + + F +
Sbjct: 291 PDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVI 350
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ G E ++ +NS +G + K MY + V+ MK AG D + ++EAY +
Sbjct: 351 FEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGR 410
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G S++ AL + + TP + L +L + GR A ++ +
Sbjct: 411 CGSSDQ--ALSIYDGMLQAGCTP-DLATFNTLLAALAREGRWEHAELILDELNRSSYKPN 467
Query: 294 PSIYASLICSFASITE-----------------------------------VKLAEELFK 318
YAS++ ++A+ E V AE+ F
Sbjct: 468 DIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFL 527
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
G L D ++ MY ++G+++K D +++ L+ D ++ + G R
Sbjct: 528 AMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLE-PDVVTYNCLMGMYGRE 586
Query: 379 G-YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
G Y + ++ G P V+Y ++I +Y + S A ++F EM G Y
Sbjct: 587 GMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTY 646
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++ V Y G +A+ +V M GC+P+ Y +L+D + + +VE++ K ++
Sbjct: 647 NTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKS 706
Query: 498 RKVTPDKVSYTTVISAYNRAREFDM 522
K +Y + + R ++D+
Sbjct: 707 SDPNFSKAAYRRIAA---RVDDYDL 728
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 187/425 (44%), Gaps = 37/425 (8%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+LIRY +S + DS + + + KI PD +T LV + +A + + A +
Sbjct: 105 VLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSF------- 157
Query: 182 GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
++ M G+ + Y +M+A+ K+G +
Sbjct: 158 ---------------------------FDAMLERGLTPNIPTYNLLMDAFRKVGQLDMAL 190
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E K R S Y IL D+L +GR A K F M G D Y++L+
Sbjct: 191 GLFAEMKRRGFQP---SVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLV 247
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
V+ A ++F+E ++G+ D L+ + G +++ +++ M
Sbjct: 248 NGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFH 307
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
I++ K AA +V+ +++ GC P ++Y +I++Y R ++A ++
Sbjct: 308 PDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQM 367
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
EM + GF Y+S++ G++ +A ++ +M+ GC P+V YN LMDM G+
Sbjct: 368 LEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGK 427
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
++ +L+++M+ + V PD +SY I D + + + + G +D+A+
Sbjct: 428 RGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAM 487
Query: 542 AGIMV 546
I++
Sbjct: 488 YRILI 492
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 163/380 (42%), Gaps = 7/380 (1%)
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
LVY+K+ G LD Y ++ + + G + +F E K + S P + Y L
Sbjct: 86 LVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKG--SEP-DEYTYGFLV 142
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
++LGK+GR EA FF M E+G+ + Y L+ +F + ++ +A LF E + +G
Sbjct: 143 NALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGF- 201
Query: 327 RDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
P V +L+ G V + M +VNG K A
Sbjct: 202 -QPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAH 260
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
KV+ +++ +G V Y S++ + + K+ EM +KGF ++++++
Sbjct: 261 KVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDAL 320
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
GK + A + A+M GC+P++ YN L+D + R + Q ++ +EM P+
Sbjct: 321 GKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPET 380
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+Y ++I + D E G D ++ + K + + +L Q
Sbjct: 381 KTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQ 440
Query: 565 MKSEGTKLDERLYHSAMNAL 584
MK +G + D Y ++ L
Sbjct: 441 MKDKGVEPDTLSYAVRIDGL 460
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 170/381 (44%), Gaps = 3/381 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ ++M + G L +++ AY + S LF + +S T H + L D
Sbjct: 17 LLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPT---VHAFTKLID 73
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L SG A ++ + +KG D Y LI F ++ A E+F+E + KG
Sbjct: 74 ILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEP 133
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D LV + G V++ ++M L + +++ F K A+ ++
Sbjct: 134 DEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLF 193
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
++ +G P VTY +++A C A K+F +M G YS++V GK+
Sbjct: 194 AEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKS 253
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR+ +A + +M +G ++ YNSL+ +A N+ +V KL KEM R+ PD S+
Sbjct: 254 GRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSF 313
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T++ A +A + D + + +G D I++ +++ + ++L++M
Sbjct: 314 NTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVE 373
Query: 568 EGTKLDERLYHSAMNALRDAG 588
G + + Y+S ++ L G
Sbjct: 374 AGFIPETKTYNSLIHWLATDG 394
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 124/290 (42%), Gaps = 17/290 (5%)
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA-IVN 372
E L KE +G P +KL+ Y G K+ D + A + +C+ V+
Sbjct: 15 ETLLKEMVAEGRPLRPNTLVKLITAY---GRGNKSGDAFDLFNQA-----ESFACSPTVH 66
Query: 373 GFSK-------RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
F+K + A VY++L+ +GC + Y +I + R A ++F EM
Sbjct: 67 AFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM 126
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+ KG + Y +V GK GR+++A M +G PN+ YN LMD + L
Sbjct: 127 KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQL 186
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
L+ EM+RR P V+Y ++ A A K +++ +G D +
Sbjct: 187 DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTL 246
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
V K ++EE K+ ++M G +D Y+S + L AG M W
Sbjct: 247 VNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAG-NMDRVW 295
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 155/352 (44%), Gaps = 5/352 (1%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA--SLICSFASITEV 310
+ P + L + G+ ++ +A F + + P+++A LI + E
Sbjct: 24 EGRPLRPNTLVKLITAYGRGNKSGDAFDLFN--QAESFACSPTVHAFTKLIDILVNSGEF 81
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
+ AE ++K+ +KG D L+ + G ++ +++ MK + + +
Sbjct: 82 ERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFL 141
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
VN K A ++ ++ +G P TY +++A+ ++ A +F EM+++GF
Sbjct: 142 VNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGF 201
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
VV Y+ ++ GR+ A L KM GC P+ + Y++L++ G++ + + K
Sbjct: 202 QPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHK 261
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
+++EM R V D V+Y ++++ +A D K E G D ++
Sbjct: 262 VFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALG 321
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA-QWLQQNFE 601
K ++ + ++ M G K D Y+ +++ G QA Q L++ E
Sbjct: 322 KANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVE 373
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ + ++ L ++ K D+ + PD + + L+ S R A
Sbjct: 306 FHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQAR 365
Query: 173 TLLQVFITDGEIALLAFNSAMGGYNKLHMYYST-------ILVYEKMKSAGIVLDSGCYC 225
+L+ + G F YN L + +T V E+M++AG D Y
Sbjct: 366 QMLEEMVEAG------FIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYN 419
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
++M+ K G++++ A LF + K + ++ S Y + D L R EAL F+DM
Sbjct: 420 RLMDMLGKRGENQRAARLFQQMKDKGVEPDTLS---YAVRIDGLAFDDRLDEALVLFKDM 476
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
K G D ++Y LI + + +L +L E++
Sbjct: 477 KAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHESQ 512
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 6/144 (4%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F PE T LI +L + D ++ E+ + PD T +RL+ + + + A
Sbjct: 376 FIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAA 435
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L Q G E L++ + G +++++ MK+ G +D Y ++ A
Sbjct: 436 RLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAA 495
Query: 232 YKIGDSEKVAAL-----FLECKSR 250
++ GD+E A L F+ +SR
Sbjct: 496 HRAGDTELEAQLKHESQFMPVESR 519
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 130/601 (21%), Positives = 254/601 (42%), Gaps = 58/601 (9%)
Query: 32 FSTC-KAFPFVTVNPSSIINHRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGM 90
FS+C K +PF +++ + + H F +N + TI + D K DS
Sbjct: 3 FSSCLKFYPF-SISQAVTLTHHSFSLNLTPPSSTISFASPHSAALSSTDVKLLDS----- 56
Query: 91 LKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKI----- 145
L+ A +N A K P F PE + + ++ L +S +D + + ED K
Sbjct: 57 LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116
Query: 146 -------------------------------YNVLPDAHTCSRLVASCVRARKFK---IA 171
+ + PD H +R++ V K I+
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + V+ +++ FN + + H IL+ E M S G+V D + +M+ Y
Sbjct: 177 HAKMSVWGIKPDVS--TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234
Query: 232 YKIGDSEKVAALFLECKSRKLD-STPFSTHMYKILCDSLGKSGRAFEALKFFRDM-KEKG 289
+ GD + L + + ++ +S ++ K GR +AL F ++M + G
Sbjct: 235 IEEGDLDGA----LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEK 347
D + +L+ VK A E+ ++G DP+V ++ + G V++
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY--DPDVYTYNSVISGLCKLGEVKE 348
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
++V++ M + +++ K A ++ L S+G +P T+ S+I
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
C + A ++F EM+ KG + Y+ ++ G++ +A+ ++ +M+ GC
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
+V YN+L+D +A R+ E+++ EME V+ + V+Y T+I ++R + +
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
++ M G D+ ++ F + I++ ++Q M S G + D Y + ++ L A
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 588 G 588
G
Sbjct: 589 G 589
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/496 (21%), Positives = 208/496 (41%), Gaps = 42/496 (8%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS---------CV 163
+P+ ST +LI+ L ++ + + + ED Y ++PD T + ++ +
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 164 RARKFKI----------ANTLLQVFITDGEI--AL----------------LAFNSAMGG 195
R R+ + N ++ F +G + AL FN+ + G
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K I + + M G D Y ++ K+G+ ++ + + +R D +
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR--DCS 362
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P +T Y L +L K + EA + R + KGIL D + SLI ++A E
Sbjct: 363 P-NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
LF+E KG D L+ +G +++ L++++ M+ + S +++GF
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A ++++++ G VTY ++I+ C+ A ++ +M +G
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY 541
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+S++ + + G I+ A +V M + GCEP++ Y +L+ +A + KL + +
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV--GVFSKLS 553
+ + + +Y VI R R+ + + E A++ +V G+ +
Sbjct: 602 QMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGG 661
Query: 554 QIEELVKLLQDMKSEG 569
I E V L ++ +G
Sbjct: 662 PIREAVDFLVELLEKG 677
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 180/398 (45%), Gaps = 9/398 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL---FLECKSRKLDSTPFSTHMYKI 264
+ E MKS+ + + + ++E+Y + +++ ++ ++ K D T F M +
Sbjct: 105 ILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPD-THFYNRMLNL 163
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L D G S + E M GI D S + LI + +++ A + ++ G
Sbjct: 164 LVD--GNSLKLVEISH--AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYG 219
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
++ D + ++ YIEEG ++ L + E M S+ IV+GF K A+
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 385 KVYEQLISQ-GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+++ +Q G P Q T+ +++N C+ A ++ M Q+G+D V Y+S+++
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K G +++A+ ++ +M + C PN YN+L+ + + + +L + + + + PD
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
++ ++I R + ++ + E R G D +++ +++E + +L+
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
M+ G Y++ ++ A +A+ + E
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 216/461 (46%), Gaps = 8/461 (1%)
Query: 121 KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
KLL + + +D+++SL++ ++ + P+ +T S L+ ++ +A ++L I
Sbjct: 102 KLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIK 161
Query: 181 DG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
G + ++ F + + K+ + + +++ M + G D Y I+ KIG++
Sbjct: 162 LGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAA 221
Query: 240 VAALFLECKSRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
A L +K++ ++ Y + DS K R EAL F MK KGI D Y
Sbjct: 222 AAGLL-----KKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTY 276
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
SLI + ++ K A L E ++ D LV +EG V + V+++M
Sbjct: 277 NSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTE 336
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
++ +++ G+S R A K+++ +I++GC P +Y +IN YC++ +
Sbjct: 337 MGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDE 396
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A+++F EM +G V+Y++++ + G +R+A L M G PN++ Y+ L+D
Sbjct: 397 AKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLD 456
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ + +L++ M+ P+ V Y +I A ++ K ++E + G
Sbjct: 457 GFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQP 516
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ I ++ K ++E ++ ++M+ +G DE Y+
Sbjct: 517 NAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYN 557
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 200/445 (44%), Gaps = 5/445 (1%)
Query: 95 QTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHT 154
Q +LA+ + KL +P T LI +L + K+ + L +D PD +T
Sbjct: 147 QRVDLAFSVLAKIIKL-GLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYT 205
Query: 155 CSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMK 213
+ ++ + + A LL+ G + ++ +++ + + K + ++ MK
Sbjct: 206 YTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMK 265
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
GI D Y +++ ++ +AL E +S L+ P + +L D++ K G
Sbjct: 266 VKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRS--LNIMP-DIVTFNVLVDTICKEG 322
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
+ EA + M E G+ D Y+SL+ ++ +EV A +LF KG D
Sbjct: 323 KVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYN 382
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ 393
L+ Y + +++ + M + L ++ +++G + A +++ + +
Sbjct: 383 ILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTN 442
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G +P TY+ +++ +C+ + KA ++F MQ +V Y+ ++ K+G +RDA
Sbjct: 443 GNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDA 502
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
L +++ KG +PN IY ++++ + L + + ++ ME PD++SY +I
Sbjct: 503 RKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRG 562
Query: 514 YNRAREFDMCVKFYNEFRMNGGVID 538
+ ++ V+ E R G + D
Sbjct: 563 FLHHKDESRAVQLIGEMRDKGFIAD 587
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 191/427 (44%), Gaps = 22/427 (5%)
Query: 186 LLAFNSAMGGYNKLHMYYSTIL-VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
++ F + K+ YY T++ + ++M+ AG+ + ++ + + ++V F
Sbjct: 97 IIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHL---QRVDLAF 153
Query: 245 -LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
+ K KL P + + L + L K G+ +A++ F DM +G D Y ++I
Sbjct: 154 SVLAKIIKLGLQP-TIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIING 212
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
I E A L K+ EE G + ++ + ++ V + LD+ MK +
Sbjct: 213 LCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPD 272
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+++ G + A + ++ S +P VT+ +++ C+ S+A+ V
Sbjct: 273 IFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLK 332
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M + G + VV YSS++ Y + +A L M KGC+P+V+ YN L++ + + K
Sbjct: 333 TMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVK 392
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ + ++L+ EM + +TP+ VSY T+I + + NG + +
Sbjct: 393 RIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYS 452
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA------LRDA---------- 587
I++ F K + +L + M+S +K + +Y+ ++A LRDA
Sbjct: 453 ILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVK 512
Query: 588 GLQMQAQ 594
GLQ AQ
Sbjct: 513 GLQPNAQ 519
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 156/340 (45%), Gaps = 5/340 (1%)
Query: 265 LCDSLGKSGRAFEA-LKFFRDMKEKGILEDPSIY--ASLICSFASITEVKLAEELFKEAE 321
L ++ K G+ ++ + + M+ G+ P+IY + LI F+ + V LA + +
Sbjct: 103 LLSAIVKMGQYYDTVISLTKQMELAGL--SPNIYTLSILINCFSHLQRVDLAFSVLAKII 160
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ G+ L+ + G + +++ + M + I+NG K
Sbjct: 161 KLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETA 220
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
AA + +++ GC P VTY++II+++ + ++A +F M+ KG + Y+S++
Sbjct: 221 AAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLI 280
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ ++A L+ +M++ P++ +N L+D + + + + + K M V
Sbjct: 281 QGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVE 340
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD V+Y++++ Y+ E K ++ G D I++ + K+ +I+E +L
Sbjct: 341 PDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQL 400
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+M +G + Y++ ++ L G +A+ L +N
Sbjct: 401 FNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMH 440
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 211/501 (42%), Gaps = 7/501 (1%)
Query: 102 DYYNEAKKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
D + ++ P ST+ L+ + + K + +++SLS + + PD +T + L+
Sbjct: 133 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 192
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
S R+ A ++L + G + FN+ + G + +++K G
Sbjct: 193 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 252
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
D Y +M K+G++ L + + Y + DSL K + EA
Sbjct: 253 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIA---YNTIIDSLCKDRQVTEA 309
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
F +M KGI D Y SLI + ++ E K L E ++ + V +V
Sbjct: 310 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 369
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+EG++ DVV+ M ++ A+++G R AVKV++ ++ +GC+P
Sbjct: 370 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 429
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+Y +IN YC+I KA + +M +G V Y++++ GR++ A+ L
Sbjct: 430 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 489
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M A G P++ Y L+D + +L + L K +E + D + Y I RA
Sbjct: 490 EMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 549
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
E + ++ G D IM+ K ++E KL + M G D +Y+
Sbjct: 550 ELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYN 609
Query: 579 SAMNA-LRDAGLQMQAQWLQQ 598
+ + LR Q LQ+
Sbjct: 610 TIIRGFLRSNETFGATQLLQE 630
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 156/410 (38%), Gaps = 53/410 (12%)
Query: 202 YYSTIL-VYEKMKSAGIVLDS-------GCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
+YST+L + +M S GI D +C + Y K+ L L C+ D
Sbjct: 165 HYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKL--LKLGCQP---D 219
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+T F+T L L G+ EAL F +G D Y +L+ + A
Sbjct: 220 NTTFNT-----LIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAA 274
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L + +K C V+ Y I++
Sbjct: 275 IRLLRSMVQKN-------CRPNVIAY----------------------------NTIIDS 299
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
K R A ++ ++I++G P TY S+I+A C + + + EM
Sbjct: 300 LCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 359
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VV +S++V K G I A +V M +G EP+V Y +LMD H + + K++
Sbjct: 360 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 419
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
M + P+ SY +I+ Y + + D + + + G + D ++ +
Sbjct: 420 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 479
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
+++ + L +M + G D Y ++ L +A L + EG+
Sbjct: 480 RLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS 529
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/564 (22%), Positives = 240/564 (42%), Gaps = 70/564 (12%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A+ +++E K +P+ + +I L ++ + L + +P A+ +
Sbjct: 269 DMAWKFFHELKS-QGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNT 327
Query: 158 LVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMK--- 213
++ A +F+ A LL G I ++++FNS + K + ++E MK
Sbjct: 328 MIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA 387
Query: 214 -----SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----------CKSRKLDS--- 254
+ I++D C +E Y I D + A LF CK++K +
Sbjct: 388 EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYE 447
Query: 255 ----------TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
P S Y L D LGK G +A + F +M + G +P +Y SLI +F
Sbjct: 448 MFETASQRGCNPNSV-TYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNF 506
Query: 305 ASITEVKLAEELFKEAEEKGMLRD---------------------------------PEV 331
+ ++FKE +G D P+V
Sbjct: 507 FMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDV 566
Query: 332 CLKLVLMY--IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
+L++ + G +T + +MK + A+V+GF K A +V E+
Sbjct: 567 RSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEE 626
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ + P TY SII+ +I +A +F E + KG + V+ YSS++ +GK GR
Sbjct: 627 MKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 686
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
I +A ++ +M KG PNV+ +NSLMD +A+ + + ++ M+ K +P+ +Y+
Sbjct: 687 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSI 746
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+I+ R ++++ F+ E + G V + M+ +K+ I + L + K+ G
Sbjct: 747 LINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANG 806
Query: 570 TKLDERLYHSAMNALRDAGLQMQA 593
D +++ + + A ++A
Sbjct: 807 GTPDAASFNALIEGMSHANRAIEA 830
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/520 (21%), Positives = 228/520 (43%), Gaps = 11/520 (2%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P F+S L + K + E A + KK E P ST ++I L + K +
Sbjct: 354 IPSVVSFNSILTCLGKKRKVDE-ALTLFEAMKKDAE--PNSSTYNIIIDMLCMAGKVEEA 410
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+ ++ + + P+ T + +V +A+KF+ A + + G + + S + G
Sbjct: 411 YMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDG 470
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR--KLD 253
K ++E M G + Y ++ ++ G E +F E R + D
Sbjct: 471 LGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPD 530
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
T +T+M D + K+G + F D+K G L D Y+ LI + +
Sbjct: 531 LTLLNTYM-----DCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARET 585
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+F +++G D +V + + G ++K +V+E MK ++ + +I++G
Sbjct: 586 SSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDG 645
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+K A ++E+ S+G + Y+S+I+ + ++ +A + EM +KG
Sbjct: 646 LAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 705
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V ++S++ K I +A+ MK C PN + Y+ L++ R + + W+
Sbjct: 706 VYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 765
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
EM+++ + P+ V+YTT+I+ + + F+ NGG D A ++ S +
Sbjct: 766 EMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHAN 825
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ E + ++ + +G +++ + S ++AL A QA
Sbjct: 826 RAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQA 865
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 105/472 (22%), Positives = 187/472 (39%), Gaps = 44/472 (9%)
Query: 155 CSRLVASCVRARKFKIANTLLQVFI-TDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMK 213
C+ LV++ VR R+ A ++ A A+ +G + + + +M+
Sbjct: 150 CADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQ 209
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
G + + ++ A + G E AL E K L+ +Y + D GK+G
Sbjct: 210 EVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEP---DIVLYNVCIDCFGKAG 266
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
A KFF ++K +G+ D Y S+I + AEELF + E + +
Sbjct: 267 NVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYN 326
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL--- 390
+++ Y G E +++ +K S +I+ K+R A+ ++E +
Sbjct: 327 TMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKD 386
Query: 391 -----------ISQGCIPGQVTYASII--------------------NAYCRIALYSKAE 419
I C+ G+V A +I + C+ + A
Sbjct: 387 AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAY 446
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD-- 477
++F Q+G + V Y S++ GK G + DA L M G N +Y SL+
Sbjct: 447 EMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNF 506
Query: 478 -MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
MHGR ++ K++KEM RR PD T + +A + + + + + G +
Sbjct: 507 FMHGRKED---GHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFL 563
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
D I++ +K Q E + MK +G LD R Y++ ++ +G
Sbjct: 564 PDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSG 615
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 151/339 (44%), Gaps = 1/339 (0%)
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L +L ++ R +A + M+ S Y LI + A + + A EL ++ +E G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ LV EG VE L +V+ +K + L+ + ++ F K A
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
K + +L SQG P V+Y S+I C+ S+AE++F +M+ + C AY++M+ Y
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
G G+ +A L+ ++K +GC P+V +NS++ G+ + + + L++ M ++ P+
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKDAEPNS 391
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+Y +I A + + +E G + IMV K + E ++ +
Sbjct: 392 STYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFET 451
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
G + Y S ++ L G A L +N T
Sbjct: 452 ASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDT 490
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 119/270 (44%), Gaps = 1/270 (0%)
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
C LV + ++ V+ +M+ K + + ++ ++ R A+++ Q+
Sbjct: 150 CADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQ 209
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
G G + +++ A R A + E++ + +V Y+ + +GK G +
Sbjct: 210 EVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVD 269
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
A ++K++G +P+ Y S++ + +A L + E+L+ +ME + P +Y T+I
Sbjct: 270 MAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMI 329
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
Y A +F+ K ++ + G + ++ K +++E + L + MK +
Sbjct: 330 MGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEP 389
Query: 572 LDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ Y+ ++ L AG +A ++ E
Sbjct: 390 -NSSTYNIIIDMLCMAGKVEEAYMIRDEME 418
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%)
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
KV E++ G A +++A R AE+V M++ F AY+ ++
Sbjct: 133 KVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAM 192
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ + A+ L+ +M+ G E V ++ +L+ R + L E++ + PD
Sbjct: 193 AEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDI 252
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
V Y I + +A DM KF++E + G D M+ V K ++ E +L
Sbjct: 253 VLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQ 312
Query: 565 MKSE 568
M++E
Sbjct: 313 METE 316
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 130/601 (21%), Positives = 254/601 (42%), Gaps = 58/601 (9%)
Query: 32 FSTC-KAFPFVTVNPSSIINHRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGM 90
FS+C K +PF +++ + + H F + + TI + + D K DS
Sbjct: 3 FSSCLKFYPF-SISQAVTLTHHSFSLKLTPPSSTISFASPNSAALSSSDVKLLDS----- 56
Query: 91 LKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFK------ 144
L+ A +N A K P F PE + + ++ L +S +D + + ED K
Sbjct: 57 LRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEM 116
Query: 145 ------------------------------IYNVLPDAHTCSRLVASCVRARKFK---IA 171
+ + PD H +R++ V K IA
Sbjct: 117 GTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIA 176
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + V+ +++ FN + + H IL+ E M S G+V D + IM+ Y
Sbjct: 177 HAKMSVWGIKPDVS--TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGY 234
Query: 232 YKIGDSEKVAALFLECKSRKLD-STPFSTHMYKILCDSLGKSGRAFEALKFFRDM-KEKG 289
+ GD + L + + ++ +S ++ K GR +AL F ++M + G
Sbjct: 235 IEEGDLDGA----LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEK 347
D + +L+ VK A E+ ++G DP+V ++ + G V++
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY--DPDVYTYNSVISGLCKLGEVKE 348
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
++ ++ M + +++ K A ++ L S+G +P T+ S+I
Sbjct: 349 AVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
C + A ++F EM+ KG + Y+ ++ G++ +A+ ++ +M+ GC
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
+V YN+L+D +A +R+ E+++ EME V+ + V+Y T+I ++R + +
Sbjct: 469 SVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLM 528
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
++ M G D+ ++ F + I++ ++Q M S G + D Y + ++ L A
Sbjct: 529 DQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 588 G 588
G
Sbjct: 589 G 589
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/496 (21%), Positives = 207/496 (41%), Gaps = 42/496 (8%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS---------CV 163
+P+ ST +LI+ L ++ + + + ED Y ++PD T + ++ +
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGAL 244
Query: 164 RARKFKI----------ANTLLQVFITDGEI--AL----------------LAFNSAMGG 195
R R+ + N ++ F +G + AL FN+ + G
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K I + + M G D Y ++ K+G+ ++ + +R D +
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITR--DCS 362
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P +T Y L +L K + EA + R + KGIL D + SLI ++A E
Sbjct: 363 P-NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
LF+E KG D L+ +G +++ L++++ M+ + S +++GF
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A ++++++ G VTY ++I+ C+ A ++ +M +G
Sbjct: 482 KANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKF 541
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+S++ + + G I+ A +V M + GCEP++ Y +L+ +A + KL + +
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV--GVFSKLS 553
+ + + +Y VI R R+ + + E A++ +V G+ +
Sbjct: 602 QMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGG 661
Query: 554 QIEELVKLLQDMKSEG 569
I E V L ++ +G
Sbjct: 662 PIREAVDFLVELLEKG 677
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 115/539 (21%), Positives = 203/539 (37%), Gaps = 77/539 (14%)
Query: 63 PTIELNRDSHHQTAVPDAKKFDSFL----------------------------------- 87
P I + D VPD K F + +
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266
Query: 88 HGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYN 147
HG K+ + ++ A ++ E F P++ T L+ L ++ + + +
Sbjct: 267 HGFCKEGRVED-ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-DGEIALLAFNSAMGGYNKLHMYYSTI 206
PD +T + +++ + + K A L IT D + +N+ + K +
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 385
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
+ + S GI+ D + +++ + LF E +S+ + F+ Y +L
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT---YNMLI 442
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
DSL G+ EAL + M+ G Y +LI F +++ AEE+F E E G+
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVS 502
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
R+ + TL ++G K R A ++
Sbjct: 503 RN--------------SVTYNTL---------------------IDGLCKSRRVEDASQL 527
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+Q+I +G P + TY S++ +CR KA + M G + +V Y ++++ K
Sbjct: 528 MDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM-ERRKVTPDKV 505
GR+ A L+ ++ KG YN ++ R + + L++EM E+ + PD V
Sbjct: 588 AGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAV 647
Query: 506 SYTTVISAY-NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
SY V N V F E G V + + ++ LS E LVKL+
Sbjct: 648 SYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVN 706
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 234/511 (45%), Gaps = 21/511 (4%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR-----PEKSTLKLLIRYLVQSKK 132
PD ++ + G LK ++D + L E + P T +LI L S
Sbjct: 414 PDTWTYNLLIDGYLK-------SHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNS 191
+ + V P+ L+ + V+ ++++A LL++ I +G + L +N
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ G + ++ M GI ++ Y + Y K G+ + F + S
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
+ P + +Y IL G EAL F+ M EKG++ D Y+++I S + + K
Sbjct: 587 I--VP-NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTK 643
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A +F + + G++ D + L+ + +EG +EK + + M + + + + ++
Sbjct: 644 EAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLI 703
Query: 372 N--GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
N G+ K A K+++++IS+G P Y +I+ + KA +F E QQK
Sbjct: 704 NDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS 763
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ A++S++ + K G++ +A L M K PN+ Y L+D +G+A+ + + E
Sbjct: 764 VGS-LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAE 822
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNR-AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+L+ +ME R + P+ ++YT+++ +YN+ F M + + + G D G+M
Sbjct: 823 QLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKM-ISLFKDMEARGIACDAIAYGVMASA 881
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ K + E +KLL EG KL++ ++ +
Sbjct: 882 YCKEGKSLEALKLLNKSLVEGIKLEDDVFDA 912
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 231/518 (44%), Gaps = 23/518 (4%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKL---PEFRPEKSTLKLLIRYLVQSKKWD 134
P+ +++F+ G+ Q A D E KKL P+ T LL+ + K+
Sbjct: 274 PNLFTYNAFIGGL-----CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSK 328
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAM 193
+ E + P+ T + L+ ++ + A + IT G ++ ++ +N+ +
Sbjct: 329 EAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
GG K + ++ +M AGI D+ Y +++ Y K D K L E K+RKL
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLT 448
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+PF+ Y +L L S +A + M G+ + +Y +LI ++ + ++A
Sbjct: 449 PSPFT---YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMA 505
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
EL K G+L D L++ VE+ ++ M +K + A +N
Sbjct: 506 IELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINL 565
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+SK A + ++ ++S G +P V Y +I +C + +A F M +KG
Sbjct: 566 YSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPD 625
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ AYS+++ K G+ ++AM + K G P+V++YNSL+ + ++ + +L+
Sbjct: 626 IRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYD 685
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDM--CVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
EM + P+ V Y T+I+ Y + ++ K ++E G D I I++ K
Sbjct: 686 EMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGK 745
Query: 552 LSQIEELVKLLQD--MKSEGTKLDERLYHSAMNALRDA 587
+E+ + L + KS G+ SA N+L D+
Sbjct: 746 EGNLEKALSLFHEAQQKSVGS-------LSAFNSLIDS 776
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 221/488 (45%), Gaps = 17/488 (3%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P LI+ VQ +++ + L + VLPD + L+ RA+K + A
Sbjct: 483 KPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKM 542
Query: 174 LLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEK----MKSAGIVLDSGCYCQIME 229
LL + GE + G + L+ I V E+ M S+GIV ++ Y +++
Sbjct: 543 LL---VDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIK 599
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
+ +G++ + + F +C K P Y + SL K+G+ EA+ F + G
Sbjct: 600 GHCDVGNTVEALSTF-KCMLEK-GLIP-DIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM----YIEEGLV 345
++ D +Y SLI F +++ A +L+ E G+ +P + + L+ Y + G +
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI--NPNIVVYNTLINDYGYCKSGNL 714
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+ + + M + + I C +++G K A+ ++ + Q + + S+
Sbjct: 715 TEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE-AQQKSVGSLSAFNSL 773
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
I+++C+ +A ++F +M K +V Y+ ++ YGK + +A L M+ +
Sbjct: 774 IDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI 833
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
PN Y SL+ + + N ++ L+K+ME R + D ++Y + SAY + + +K
Sbjct: 834 IPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALK 893
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
N+ + G ++ + ++ K QI +++LL +M E L + ++ +
Sbjct: 894 LLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFY 953
Query: 586 DAGLQMQA 593
+G + +A
Sbjct: 954 KSGNEDEA 961
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 179/425 (42%), Gaps = 47/425 (11%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK----VAALFLECKSRKLDSTPFSTHMYK 263
VY M A IV D Y +++A+ K+GD K ++ + ECK + Y
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKP--------NLFTYN 280
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
L ++G EAL+ + M EKG+ D Y L+ F K A+ +F+
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G+ + L+ +I+EG +E+ L + + M LK++ A++ G +K A
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400
Query: 384 VKVYEQLISQGC-----------------------------------IPGQVTYASIINA 408
+ ++ +++ G P TY+ +I+
Sbjct: 401 MSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
C + KA +V +M + G V Y +++ Y + R A+ L+ M A G P+
Sbjct: 461 LCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
++ YN L+ RAK + + + L +M + + P+ +Y I+ Y+++ E + +++
Sbjct: 521 LFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFK 580
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ +G V + I I++ + E + + M +G D R Y + +++L G
Sbjct: 581 DMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNG 640
Query: 589 LQMQA 593
+A
Sbjct: 641 KTKEA 645
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 143/306 (46%), Gaps = 15/306 (4%)
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
K + M E I+ D Y ++I + + +V + + E E++ C + Y
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE--------CKPNLFTY 279
Query: 340 -------IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
+ G V++ L+V + M L +V+GF K++ A ++E + S
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS 339
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
G P + TY ++I+ + + +A ++ EM +G VV Y++M+ K G +
Sbjct: 340 SGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAK 399
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
AM L +M G EP+ W YN L+D + ++ ++ + +L EM+ RK+TP +Y+ +IS
Sbjct: 400 AMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLIS 459
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ + + ++ NG + + G ++ + + S+ E ++LL+ M + G
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519
Query: 573 DERLYH 578
D Y+
Sbjct: 520 DLFCYN 525
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/402 (19%), Positives = 162/402 (40%), Gaps = 42/402 (10%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ +I L ++ K + + F V+PD + L++ + + A+ L
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683
Query: 175 LQVFITDG-EIALLAFNSAMG--GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ +G ++ +N+ + GY K ++++M S GI D YC +++
Sbjct: 684 YDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGC 743
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K G+ EK +LF E + + + S + L DS K G+ EA + F DM +K +
Sbjct: 744 GKEGNLEKALSLFHEAQQKSVGSL----SAFNSLIDSFCKHGKVIEARELFDDMVDKKLT 799
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y LI ++ ++ AE+LF + E + ++ + L+L Y + G
Sbjct: 800 PNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIG-------- 851
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+ + +++ + ++G + Y + +AYC+
Sbjct: 852 ---------------------------NRFKMISLFKDMEARGIACDAIAYGVMASAYCK 884
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+A K+ + +G + +++ K +I + L+++M + +
Sbjct: 885 EGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKT 944
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
N+L+ ++ N + K+ M+R P +S T IS
Sbjct: 945 CNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIST 986
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 139/339 (41%), Gaps = 15/339 (4%)
Query: 76 AVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
VPD ++S + G K+ ++ A Y+E P LI K +
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEK-ASQLYDEMLH-NGINPNIVVYNTLINDYGYCKSGN- 713
Query: 136 IVSLSEDFKIYN------VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAF 189
L+E FK+++ + PD + L+ C + + A +L +L AF
Sbjct: 714 ---LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAF 770
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
NS + + K +++ M + + Y +++AY K E+ LFL+ ++
Sbjct: 771 NSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMET 830
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
R + P +T Y L S + G F+ + F+DM+ +GI D Y + ++ +
Sbjct: 831 RNI--IP-NTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGK 887
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
A +L ++ +G+ + +V L+ +E + L+++ M +L +S
Sbjct: 888 SLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNT 947
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
++ GF K A KV + G +P ++ I+
Sbjct: 948 LLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIST 986
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 97/214 (45%), Gaps = 1/214 (0%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A V+ IS+G P + +++ + + KV+ M + V Y++++
Sbjct: 191 ASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIK 250
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ K G + ++++M+ K C+PN++ YN+ + + + + ++ K M + + P
Sbjct: 251 AHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGP 309
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D +YT ++ + + + + +G +R ++ F K IEE +++
Sbjct: 310 DGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIK 369
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+M + G KL+ Y++ + + AG +A L
Sbjct: 370 DEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSL 403
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 217/501 (43%), Gaps = 7/501 (1%)
Query: 102 DYYNEAKKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
D + ++ P ST+ L+ + ++K++ ++ SLS + + PD +T + L+
Sbjct: 50 DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 109
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
S + A ++L + G + F + + G + +++KM G
Sbjct: 110 NSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 169
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
+ Y ++ K+G++ L +S + + +Y + DSL K + EA
Sbjct: 170 PNVVTYGTLINGLCKVGNTNAAIRLL---RSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 226
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
F M +GI D Y SLI S ++ E K L + ++ D + +V
Sbjct: 227 FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 286
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+EG + + DVV+ M ++ + A+++G + AVKV++ ++ G P
Sbjct: 287 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 346
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
++Y ++IN YC+I KA +F EM QK V Y++++ GR++DA+ L
Sbjct: 347 VISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFH 406
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M A G P++ Y L+D + +L + L K +E + PD YT VI RA
Sbjct: 407 EMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAG 466
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
E + ++ G + IM+ + ++E KL +M G D Y+
Sbjct: 467 ELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYN 526
Query: 579 SAMNALRDAGLQMQA-QWLQQ 598
+ L ++A Q LQ+
Sbjct: 527 TITQGLLQNKEALRAIQLLQE 547
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 149/357 (41%), Gaps = 2/357 (0%)
Query: 249 SRKLDS--TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
S ++DS P + IL +S R A + + G+ D + + +LI
Sbjct: 90 SNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCV 149
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
++ A LF + +G + L+ + G + ++ SM+ + +
Sbjct: 150 EGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 209
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
+I++ K R A ++ +++ QG P TY S+I++ C + + + +M
Sbjct: 210 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 269
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
VV +S++V K G+I +A +V M +G EPNV YN+LMD H +
Sbjct: 270 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD 329
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ K++ M P+ +SY T+I+ Y + + D + E + + ++
Sbjct: 330 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 389
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
+ ++++ + L +M + G D Y ++ L +A L + EG+
Sbjct: 390 HGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS 446
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 169/431 (39%), Gaps = 41/431 (9%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I L R PD + S + + KD Q E A++ +++ P+ T LI
Sbjct: 192 IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE-AFNLFSKMVG-QGISPDIFTYTSLI 249
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-E 183
L +W + +L ++PD S +V + + K A+ ++ + I G E
Sbjct: 250 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 309
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ +N+ M G+ + V++ M G + Y ++ Y KI +K L
Sbjct: 310 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 369
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
F E ++L P +T Y L L GR +A+ F +M G + D + Y L+
Sbjct: 370 FEEMCQKEL--IP-NTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDY 426
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ + A L K E M DP++ + +
Sbjct: 427 LCKKSHLDEAMALLKTIEGSNM--DPDIQIYTI--------------------------- 457
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+++G + AA ++ L S+G P TY +IN CR L +A K+F+
Sbjct: 458 ------VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFM 511
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM G Y+++ + A+ L+ +M A+G +V L++M K
Sbjct: 512 EMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDK 571
Query: 484 NLRQVEKLWKE 494
+ V+++ E
Sbjct: 572 LDQSVKQILSE 582
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 218/491 (44%), Gaps = 10/491 (2%)
Query: 95 QTQELAYDYYNEA----KKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNV 148
++ L ++ +EA ++ +P ST+ L+ + ++K +++SLS + +
Sbjct: 42 HSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGI 101
Query: 149 LPDAHTCSRLVASCVRARKFKIA-NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTIL 207
PD +T + ++ S + A + L ++ + F + + G +
Sbjct: 102 PPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALH 161
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+++KM G + Y ++ K+G++ L +S + + + ++ L D
Sbjct: 162 LFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLL---RSMEQGNCQPNVVVFSTLID 218
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
SL K + EA F +M KGI + Y SLI + E K L E + ++
Sbjct: 219 SLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP 278
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D +V +EG+V + DVV+ M + ++ + A+++G R AVKV+
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 338
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ ++ + C+ ++Y ++IN YC+I KA +F EM ++ V Y++++
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 398
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR++DA+ L +M A+G P++ Y +L D + ++L + L K +E PD Y
Sbjct: 399 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 458
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
TT++ RA E + ++ G + IM+ K + E KL +M
Sbjct: 459 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 518
Query: 568 EGTKLDERLYH 578
G ++ Y+
Sbjct: 519 NGCSPNDCTYN 529
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/407 (19%), Positives = 170/407 (41%), Gaps = 18/407 (4%)
Query: 202 YYSTIL-VYEKMKSAGIVLDS-------GCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
++ST+L + +M S GI D C + + K+ L + D
Sbjct: 85 HHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKL-----GHQPD 139
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+T F+T L L G+ EAL F M +G + Y +LI + A
Sbjct: 140 ATTFTT-----LIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAA 194
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L + E+ + V L+ ++ V + ++ M + + ++++G
Sbjct: 195 IRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHG 254
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
K + + +++ +P T ++++A C+ + ++A V M +G +
Sbjct: 255 LCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPN 314
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VV Y++++ + + A+ + M K C NV YN+L++ + + +++ + L++
Sbjct: 315 VVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFE 374
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
EM R+++TP+ V+Y T+I + ++E G + D + K
Sbjct: 375 EMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNR 434
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+++ + LL+ ++ D ++Y + ++ + AG A+ L N
Sbjct: 435 HLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 481
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 159/387 (41%), Gaps = 10/387 (2%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I L R P+ F + + + KD Q E A++ ++E P T LI
Sbjct: 195 IRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE-AFNIFSEMIT-KGISPNIVTYNSLI 252
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-E 183
L + +W + +L + ++PD T + +V + + A+ ++ + I G E
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 312
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ +N+ M G+ + + V++ M V + Y ++ Y KI +K L
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 372
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
F E ++L TP +T Y L L GR +A+ F +M +G + D Y +L
Sbjct: 373 FEEMSRQEL--TP-NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 429
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLK 361
+ A L K E G DP++ + ++ G +E D+ ++ + L+
Sbjct: 430 LCKNRHLDKAMALLKAIE--GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ +++G K+ A K++ ++ GC P TY I + R + ++
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIEL 547
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTG 448
EM +GF V + +V M G
Sbjct: 548 LEEMLARGFSVDVSTTTLLVGMLSDDG 574
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 131/575 (22%), Positives = 243/575 (42%), Gaps = 85/575 (14%)
Query: 99 LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRL 158
+A+ +++E K +P+ + +I L ++ + L + +P A+ + +
Sbjct: 1 MAWKFFHELKA-QGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 59
Query: 159 VASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMK---- 213
+ A +F+ A LL+ G I ++++FNS + K + ++E MK
Sbjct: 60 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE 119
Query: 214 ----SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----------CKSRKLDSTPFS 258
+ I++D C +E Y+I D + A+LF CK+RKL+
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEA--- 176
Query: 259 THMYKI------------------LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
YKI L D LGK G+ EA + F M + G +P +Y SL
Sbjct: 177 ---YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 233
Query: 301 I------------------------------------CSFASITEVKLAEELFKEAEEKG 324
I C F + EV+ +F++ G
Sbjct: 234 IRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKA-GEVEKGRMIFEDIRSYG 292
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
L D L+ + G +T ++ +MK + A+V+GF K A
Sbjct: 293 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 352
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
++ E++ + P TY +I++ +I +A +F E + KG + VV YSS++ +
Sbjct: 353 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 412
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
GK GRI +A ++ +M KG PNV+ +NSL+D +A+ + + ++ M+ K P+
Sbjct: 413 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNT 472
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+Y+ +I+ R ++++ F+ + + G V + M+ +K+ I + L +
Sbjct: 473 YTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 532
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQM---QAQWL 596
K+ G D +++ + + +A M QA WL
Sbjct: 533 FKANGGIPDAASFNALIEGMSNANRAMEAYQAGWL 567
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 115/253 (45%), Gaps = 6/253 (2%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+PD + + +HG+ K Q +E + ++ A K F + ++ +S K
Sbjct: 294 LPDVRSYSILIHGLTKAGQARETSNIFH--AMKQQGFALDARAYNAVVDGFCKSGKVHKA 351
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+ E+ K V P T +V + + A L + + G E+ ++ ++S + G
Sbjct: 352 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 411
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K+ L+ E+M G+ + + +++A K +E++ + +S K
Sbjct: 412 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVK---AEEINEALVCFQSMKEMKC 468
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P +T+ Y IL + L + + +A F++DM+++G++ + Y ++I A + + A
Sbjct: 469 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYS 528
Query: 316 LFKEAEEKGMLRD 328
LF+ + G + D
Sbjct: 529 LFERFKANGGIPD 541
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 133/561 (23%), Positives = 225/561 (40%), Gaps = 78/561 (13%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ T +I L ++ K + + E+ V PD T + +V RA K A+
Sbjct: 6 FEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEAD 65
Query: 173 TLLQVFITDGEIA-LLAFNS---------------------AMGGYNKLHMYYSTIL--- 207
L I G A +A+N+ A GY ++ Y+TIL
Sbjct: 66 ELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGL 125
Query: 208 -----------VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDS 254
++ M S G D Y +++A YK G + LF ++ RK+
Sbjct: 126 CRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAP 185
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+ Y L D + + EA+K F+D+ KG + D Y S++ A + + AE
Sbjct: 186 DLIT---YNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 242
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E+FK+ + G + ++ + G + + L++ E M + + A+++
Sbjct: 243 EMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDML 302
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K + A KV E++ G +P VTY +++ C+ L KA ++F M G +
Sbjct: 303 CKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 362
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V+YS ++ KT ++ DA L +M + P+V +N LMD +A L + + L
Sbjct: 363 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDV 422
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR-----AIAGI----- 544
M V PD V+ TT++ R + D V+ + G V D +AG+
Sbjct: 423 MSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGK 482
Query: 545 ---------------------------MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+V + ++++ V Q M G D Y
Sbjct: 483 LAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAY 542
Query: 578 HSAMNALRDAGLQMQAQWLQQ 598
++ MN LR G +QA L Q
Sbjct: 543 NTLMNGLRKQGRHIQADRLTQ 563
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 92/467 (19%), Positives = 190/467 (40%), Gaps = 47/467 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELA--YDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
PD +++ L G+ + + E +D P+ L L + ++ W
Sbjct: 113 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGL 172
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMG 194
++ D V PD T + L+ R K A L + I G + + +NS +
Sbjct: 173 FKTM--DMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILL 230
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-------- 246
G + +++KM +G + Y ++ + ++G+ + L+ E
Sbjct: 231 GLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSP 290
Query: 247 ------------CKSRKLD-------------STPFSTHMYKILCDSLGKSGRAFEALKF 281
CK++K+D + P Y IL D L K+ +A +
Sbjct: 291 DVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVP-DVVTYNILLDGLCKTNLVDKAHEL 349
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--Y 339
F M + G D Y+ ++ +V A LF E+ ++ P+V +LM
Sbjct: 350 FSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLV--PDVVTFNILMDGL 407
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCA-IVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+ G +++ D+++ M + + D ++C +++G + + AV++++ ++ +G +
Sbjct: 408 CKAGKLDEAKDLLDVMSEHNV-LPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVAD 466
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYGKTGRIRDAMWL 456
+ + ++ CR ++A F M + F VV Y+++V + GR+ A+
Sbjct: 467 VLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDY 526
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+M GC P+ YN+LM+ + Q ++L + M+ + D
Sbjct: 527 FQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%)
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M +KGF+ VV YS++++ KTG++ +A+ +V +M KG P+V Y ++D RA
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+ + ++L+ +M R + + V+Y +I+ + + K E G D
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ ++ ++ E + M S G D Y+ ++AL G +A L
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGL 172
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 181/394 (45%), Gaps = 4/394 (1%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
LL+R VQ++K K + + C+ L+ V+ +A + Q +
Sbjct: 189 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 248
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G ++ + N + K +T M+ G+ D Y ++ AY + G E+
Sbjct: 249 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 308
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
L + L F+ Y + + L K+G+ A +M + G+ D + Y L
Sbjct: 309 FELMDSMSGKGLKPCVFT---YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 365
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ + AE +F E +G++ D L+ + + G +++ L MKNA L
Sbjct: 366 LVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGL 425
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ I ++ GF + A+KV ++++ QGC+ VTY +I+N C+ + S+A++
Sbjct: 426 APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADE 485
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+F EM ++G +++++ Y K G + A+ L M + +P+V YN+L+D
Sbjct: 486 LFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFC 545
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ + +V +LW +M R++ P+ +SY +I+ Y
Sbjct: 546 KGSEMEKVNELWNDMISRRIYPNHISYGILINGY 579
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 208/471 (44%), Gaps = 45/471 (9%)
Query: 84 DSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDF 143
+S L G++K +LA++ Y E + + TL ++I L +++K ++ S D
Sbjct: 223 NSLLGGLVKVGWV-DLAWEIYQEVVR-SGVQVNVYTLNIMINALCKNQKIENTKSFLSDM 280
Query: 144 KIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMY 202
+ V PD T + L+ + R + A L+ G + + +N+ + G K Y
Sbjct: 281 EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 340
Query: 203 YSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFSTH 260
V ++M G+ D+ Y ++ + + +F E S+ + D FS
Sbjct: 341 LRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA- 399
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---CSFASITE-------- 309
L L K+G +ALK+FRDMK G+ D IY LI C ++E
Sbjct: 400 ----LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM 455
Query: 310 ------------------------VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+ A+ELF E E+G+ D L+ Y ++G +
Sbjct: 456 LEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNM 515
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
K + + E M LK +++GF K +++ +IS+ P ++Y +
Sbjct: 516 NKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGIL 575
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
IN YC + S+A +++ EM +KGF+ ++ +++V Y + G A ++ M KG
Sbjct: 576 INGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 635
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
P+ YN+L++ + +N+ + L +ME + PD ++Y +++ ++R
Sbjct: 636 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 686
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%)
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+P ++ L+ ++ +++ E F+ + KG+ C L+ ++ G V+ ++
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ + + ++++ ++N K + + +G P VTY ++INAYCR
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 302
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
L +A ++ M KG CV Y++++ KTG+ A ++ +M G P+ Y
Sbjct: 303 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 362
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N L+ R N+ E+++ EM + V PD VS++ +I ++ D +K++ + +
Sbjct: 363 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 422
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G D I I++G F + + E +K+ +M +G LD Y++ +N L
Sbjct: 423 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGL 474
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 82/190 (43%), Gaps = 17/190 (8%)
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK-----------------GCEPNVWIY 472
F + ++S+M+ + ++ R+ DA ++ +M K C N ++
Sbjct: 128 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 187
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+ L+ + +A+ LR+ + ++ ++ + + + +++ + D+ + Y E
Sbjct: 188 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVR 247
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
+G ++ IM+ K +IE L DM+ +G D Y++ +NA GL +
Sbjct: 248 SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEE 307
Query: 593 AQWLQQNFEG 602
A L + G
Sbjct: 308 AFELMDSMSG 317
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 196/430 (45%), Gaps = 20/430 (4%)
Query: 172 NTLLQVFITDGEI-----------------ALLAFNSAMGGYNKLHMYYSTILVYEKMKS 214
NTL+ FI +G + ++ + + + G K + + +M+
Sbjct: 532 NTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEK 591
Query: 215 AGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGR 274
G Y +M ++YK E+ +LF E RK ST Y ++ + L KS
Sbjct: 592 QGCEPSVVTYSSLMASFYKRDQEEESLSLFDEM-VRKGCVADVST--YSLVINCLCKSDD 648
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
+AL F MKE+G+ Y +L+ S ++ A ++F E +E ++ D V
Sbjct: 649 VDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
+V ++ V++ +V+SMKN + ++++G K A ++ ++ +G
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
P V Y S+++ + S A +F M +K VV YSS++ GK GR+ +A
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ +KGC PNV +Y+SL+D G+ + + +L++EM+RR+ P+ V+Y ++S
Sbjct: 829 YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGL 888
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+A ++ K E G V D I++ K+ ++E + MK +G D
Sbjct: 889 AKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDV 948
Query: 575 RLYHSAMNAL 584
+ S + +L
Sbjct: 949 ITFTSLIESL 958
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/491 (21%), Positives = 215/491 (43%), Gaps = 39/491 (7%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
T L+ + + D V L E K + +P T + LV +A + A +LL+
Sbjct: 530 TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM 589
Query: 179 ITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
G E +++ ++S M + K ++ ++++M G V D Y ++ K D
Sbjct: 590 EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDV 649
Query: 238 EKVAALFLE--------------------CKSRKLD------------STPFSTHMYKIL 265
++ +F K K+D S T +Y I+
Sbjct: 650 DQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIM 709
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ L KS R EA K MK + IL D Y SL+ ++ A +F + E+G
Sbjct: 710 VNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG- 768
Query: 326 LRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWA 382
+P+V LM + + G + L + +M + + D ++ ++++ K
Sbjct: 769 -HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRC-VPDVVTYSSLIDSLGKEGRVEE 826
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A +E IS+GC P Y+S+I+++ + + +A ++F EMQ++ +V Y+++++
Sbjct: 827 AYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLS 886
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
K GR+ A L+ +M+ GC P++ YN L+D G+ + + E +K M+ + + P
Sbjct: 887 GLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVP 946
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D +++T++I + + + + ++ G +++ + + ++ E +
Sbjct: 947 DVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIF 1006
Query: 563 QDMKSEGTKLD 573
+MK +G D
Sbjct: 1007 HEMKVKGCMPD 1017
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/529 (22%), Positives = 221/529 (41%), Gaps = 52/529 (9%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A + +N+ K P + ++ LV+ + S V + + + PDA T V
Sbjct: 236 ALEIFNQMKSFG-CNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFV 294
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
S R+ + A +Q I G + + F + K + MK+
Sbjct: 295 HSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCS 354
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
+ Y ++ K G E+ +F+E K + Y L D LGK+G A A
Sbjct: 355 PNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIA---YNTLIDGLGKAGEADMA 411
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
F++MK++G++ + Y +I A +LF + +E+G + D L+ +
Sbjct: 412 CGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDV 471
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP- 397
+ G ++K L +++ M K +CI N G+ ++ ++ + +
Sbjct: 472 LGKGGQMDKVLAIIKEMVE---KGGECIISRDSNA-----GHEGTIEGADRTVEYPSLGF 523
Query: 398 ---GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
G++TY ++++A+ +A K+ M++ VV Y+++V GK GR+ +A+
Sbjct: 524 KSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAV 583
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS-- 512
L+ +M+ +GCEP+V Y+SLM + + L+ EM R+ D +Y+ VI+
Sbjct: 584 SLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCL 643
Query: 513 -----------AYNRARE----------------------FDMCVKFYNEFRMNGGVIDR 539
+ R +E D ++ +NE + + V D
Sbjct: 644 CKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDT 703
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ IMV K ++++E KL+ MK++ D Y S ++ L +G
Sbjct: 704 FVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSG 752
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 114/497 (22%), Positives = 207/497 (41%), Gaps = 51/497 (10%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+ L R+ Q P + S + K Q +E + ++E + + ST L+I
Sbjct: 583 VSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEE-SLSLFDEMVR-KGCVADVSTYSLVI 640
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
L +S D + + K + P L++S V+ K A LQ+F E
Sbjct: 641 NCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFA---LQIFNELQES 697
Query: 185 ALL----AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
+L+ +N + G K + + + MK+ I+ D Y +++ K G E+
Sbjct: 698 SLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEA 757
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
+F + + + Y L D LGK G+ AL FR M +K + D Y+SL
Sbjct: 758 FNMFTKMTEEGHEPDVVA---YTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSL 814
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
I S V+ A F+ + KG C V +Y
Sbjct: 815 IDSLGKEGRVEEAYYFFENSISKG-------CTPNVGVY--------------------- 846
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
++++ F K+ A++++E++ + C P VTY ++++ + + AEK
Sbjct: 847 -------SSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEK 899
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+ EM++ G +V Y+ ++ GK G + +A +MK KG P+V + SL++ G
Sbjct: 900 LLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLG 959
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+ L + +L+ ME P V+Y +I RA + ++E ++ G + D
Sbjct: 960 KVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPD-- 1017
Query: 541 IAGIMVGVFSKLSQIEE 557
GI +G+ ++ + E
Sbjct: 1018 --GITIGIMKRILSVRE 1032
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 110/251 (43%)
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+ + ++ +M +IS + +++ F A++++ Q+ S GC P Y +
Sbjct: 199 DAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFV 258
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
+ + Y A VF ++ Q + V + ++GR+ A + +M G
Sbjct: 259 LELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGI 318
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
+P V + L+D ++ N+ + K + M+ + +P+ V+YTT+++ +A + +
Sbjct: 319 DPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACE 378
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
+ E + N D ++ K + + L ++MK G + R Y+ ++ L
Sbjct: 379 VFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLG 438
Query: 586 DAGLQMQAQWL 596
AG Q +A L
Sbjct: 439 KAGRQPEAWQL 449
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 217/501 (43%), Gaps = 8/501 (1%)
Query: 102 DYYNEAKKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
D + ++ P ST+ L+ + ++K++ ++ SLS + + PD +T + L+
Sbjct: 52 DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 111
Query: 160 ASCVRARKFKIANTLLQVFITDGEIALLA-FNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
S + A ++L + G A F + + G + +++KM G
Sbjct: 112 NSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 171
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
+ Y ++ K+G++ L +S + + +Y + DSL K + EA
Sbjct: 172 PNVVTYGTLINGLCKVGNTNAAIRLL---RSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 228
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
F M +GI D Y SLI S ++ E K L + ++ D + +V
Sbjct: 229 FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 288
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+EG + + DVV+ M ++ + A+++G + AVKV++ ++ G P
Sbjct: 289 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 348
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
++Y ++IN YC+I KA +F EM QK V Y++++ GR++DA+ L
Sbjct: 349 VISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAIALFH 407
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M A G P++ Y L+D + +L + L K +E + PD YT VI RA
Sbjct: 408 EMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAG 467
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
E + ++ G + IM+ + ++E KL +M G D Y+
Sbjct: 468 ELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYN 527
Query: 579 SAMNALRDAGLQMQA-QWLQQ 598
+ L ++A Q LQ+
Sbjct: 528 TITQGLLQNKEALRAIQLLQE 548
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 92/433 (21%), Positives = 170/433 (39%), Gaps = 46/433 (10%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I L R PD + S + + KD Q E A++ +++ P+ T LI
Sbjct: 194 IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE-AFNLFSKMVG-QGISPDIFTYTSLI 251
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-E 183
L +W + +L ++PD S +V + + K A+ ++ + I G E
Sbjct: 252 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 311
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ +N+ M G+ + V++ M G + Y ++ Y KI +K L
Sbjct: 312 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 371
Query: 244 FLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
F E ++L ++ ++T M+ GR +A+ F +M G + D + Y L+
Sbjct: 372 FEEMCQKELIPNTVTYNTLMHXC------HVGRLQDAIALFHEMVAHGQIPDLATYRILL 425
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A L K E M DP++ + +
Sbjct: 426 DYLCKKSHLDEAMALLKTIEGSNM--DPDIQIYTI------------------------- 458
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+++G + AA ++ L S+G P TY +IN CR L +A K+
Sbjct: 459 --------VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 510
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F+EM G Y+++ + A+ L+ +M A+G +V L++M
Sbjct: 511 FMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD 570
Query: 482 AKNLRQVEKLWKE 494
K + V+++ E
Sbjct: 571 DKLDQSVKQILSE 583
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 218/491 (44%), Gaps = 10/491 (2%)
Query: 95 QTQELAYDYYNEA----KKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNV 148
++ L ++ +EA ++ +P ST+ L+ + ++K +++SLS + +
Sbjct: 42 HSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGI 101
Query: 149 LPDAHTCSRLVASCVRARKFKIA-NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTIL 207
PD +T + ++ S + A + L ++ + F + + G +
Sbjct: 102 PPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALH 161
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+++KM G + Y ++ K+G++ L +S + + + ++ L D
Sbjct: 162 LFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLL---RSMEQGNCQPNVVVFSTLID 218
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
SL K + EA F +M KGI + Y SLI + E K L E + ++
Sbjct: 219 SLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP 278
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D +V +EG+V + DVV+ M + ++ + A+++G R AVKV+
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 338
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ ++ + C+ ++Y ++IN YC+I KA +F EM ++ V Y++++
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 398
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR++DA+ L +M A+G P++ Y +L D + ++L + L K +E PD Y
Sbjct: 399 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 458
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
TT++ RA E + ++ G + IM+ K + E KL +M
Sbjct: 459 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 518
Query: 568 EGTKLDERLYH 578
G ++ Y+
Sbjct: 519 NGCSPNDCTYN 529
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 150/348 (43%), Gaps = 5/348 (1%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D+T F+T L L G+ EAL F M +G + Y +LI +
Sbjct: 139 DATTFTT-----LIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSA 193
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L + E+ + V L+ ++ V + ++ M + + ++++
Sbjct: 194 AIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 253
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G K + + +++ +P T ++++A C+ + ++A V M +G +
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 313
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
VV Y++++ + + A+ + M K C NV YN+L++ + + +++ + L+
Sbjct: 314 NVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLF 373
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+EM R+++TP+ V+Y T+I + ++E G + D + K
Sbjct: 374 EEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKN 433
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+++ + LL+ ++ D ++Y + ++ + AG A+ L N
Sbjct: 434 RHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 481
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 159/387 (41%), Gaps = 10/387 (2%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I L R P+ F + + + KD Q E A++ ++E P T LI
Sbjct: 195 IRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE-AFNIFSEMIT-KGISPNIVTYNSLI 252
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-E 183
L + +W + +L + ++PD T + +V + + A+ ++ + I G E
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 312
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ +N+ M G+ + + V++ M V + Y ++ Y KI +K L
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 372
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
F E ++L TP +T Y L L GR +A+ F +M +G + D Y +L
Sbjct: 373 FEEMSRQEL--TP-NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 429
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLK 361
+ A L K E G DP++ + ++ G +E D+ ++ + L+
Sbjct: 430 LCKNRHLDKAMALLKAIE--GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ +++G K+ A K++ ++ GC P TY I + R + ++
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIEL 547
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTG 448
EM +GF V + +V M G
Sbjct: 548 LEEMLARGFSVDVSTTTLLVGMLSDDG 574
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 126/567 (22%), Positives = 245/567 (43%), Gaps = 70/567 (12%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A+ +++E K P+ T ++ L ++ + D V + E + +P A+ +
Sbjct: 148 DMAWKFFHEMKA-NGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNT 206
Query: 158 LVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMK--- 213
++ A KF A +LL+ G I +++A+N + K + ++E+MK
Sbjct: 207 MIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDA 266
Query: 214 -----SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----------CKSRKLDS--T 255
+ I++ C +EA +K+ D+ K A LF CK++KLD +
Sbjct: 267 MPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACS 326
Query: 256 PFSTHMYKI----------LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---- 301
F YK+ L D LGK GR +A + + M + + + +Y SLI
Sbjct: 327 IFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFF 386
Query: 302 --------------------------------CSFASITEVKLAEELFKEAEEKGMLRDP 329
C F + E + LF+E + +G L D
Sbjct: 387 KCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKA-GETEKGRALFEEIKARGFLPDT 445
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
L+ ++ G +T ++ +MK+ + +++GF K A ++ E+
Sbjct: 446 RSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE 505
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ + G P VTY S+++ +I +A +F E + G + V YSS++ +GK GR
Sbjct: 506 MKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGR 565
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ +A ++ +M KG PNV+ +N L+D +A+ + + ++ M+ K TP++++Y
Sbjct: 566 VDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCI 625
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+I+ + R+F+ F+ E + G + M+ +K + + L + ++ G
Sbjct: 626 LINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASG 685
Query: 570 TKLDERLYHSAMNALRDAGLQMQAQWL 596
D Y++ + L A + A L
Sbjct: 686 GIPDSASYNAMIEGLSIANRALDAYQL 712
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/498 (22%), Positives = 203/498 (40%), Gaps = 40/498 (8%)
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-DGEIA 185
+V+++ +D + + + I P +TC LVASCV++RK A LLQ+ A
Sbjct: 1 MVRTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPA 60
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
A+ + +G +++ + ++ +M+ G ++ ++ + + G + +L
Sbjct: 61 FSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLD 120
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E KS D+ +Y + D GK G+ A KFF +MK G++ D Y S++
Sbjct: 121 EMKSNTFDA---DIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLC 177
Query: 306 SITEVKLAEELFKEAEEKGML----------------------------RDPEVCLKLVL 337
+ A E+F++ E+ + + + C+ V+
Sbjct: 178 KANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVV 237
Query: 338 MYI-------EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
Y ++G +K L + E MK + + I+ K AA KV + +
Sbjct: 238 AYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYN-IIIGMLCKAGNVEAAFKVRDAM 296
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
G P T +I+ C+ +A +F M K + S++ GK GR+
Sbjct: 297 KEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRV 356
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
DA + +M PNV +Y SL+ + K++KEM R +PD + T
Sbjct: 357 DDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTY 416
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
+ +A E + + E + G + D I++ K E +L MK +G
Sbjct: 417 MDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGC 476
Query: 571 KLDERLYHSAMNALRDAG 588
LD R Y++ ++ +G
Sbjct: 477 VLDTRAYNTVIDGFCKSG 494
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 217/495 (43%), Gaps = 60/495 (12%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
E+ RD A+P+ ++ + GML E A+ + K+ F P T+ ++I
Sbjct: 261 EMKRD-----AMPNLPTYNIII-GMLCKAGNVEAAFKVRDAMKEAGLF-PNVRTINIMID 313
Query: 126 YLVQSKKWDSIVSLSE--DFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE 183
L +++K D S+ E D+K+ + PD T L+ + + A + + + +
Sbjct: 314 RLCKAQKLDEACSIFEGMDYKVCS--PDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQ 371
Query: 184 IA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
I ++ + S + + K +Y++M +G D M+ +K G++EK A
Sbjct: 372 IPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRA 431
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
LF E K+R P T Y IL SL K+G A E + + MK++G + D Y ++I
Sbjct: 432 LFEEIKARGF--LP-DTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVID 488
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL-----VEKTLDVVESMKN 357
F +V A +L +E K M P V + + +GL +++ + E K+
Sbjct: 489 GFCKSGKVNKAYQLLEEM--KTMGHHPTV---VTYGSVVDGLAKIDRLDEAYMLFEEAKS 543
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG----------------------- 394
++++ I ++++GF K A V E+++ +G
Sbjct: 544 NGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINE 603
Query: 395 ------------CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
C P Q+TY +IN C++ ++KA + EMQ++G + Y++M++
Sbjct: 604 ALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMIS 663
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
K+G + A L + +A G P+ YN++++ A +L++E + +
Sbjct: 664 GLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSI 723
Query: 503 DKVSYTTVISAYNRA 517
+ ++ A ++A
Sbjct: 724 HTKTCVALLDALHKA 738
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 125/520 (24%), Positives = 224/520 (43%), Gaps = 33/520 (6%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F + + G+ K Q E + + + P T L+ L ++ K +
Sbjct: 358 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAG--GYVPNVITYNALVNGLCKADKMERAH 415
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
++ E V PD T S LV + +A + A LL + G ++ FNS + G
Sbjct: 416 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL 475
Query: 197 NKLHMYYSTILVYEKMK-SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K +++ M G+V D YC +++ ++ G + + AL LD+
Sbjct: 476 CKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEAL--------LDAM 527
Query: 256 P-FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
P T+ + + L K G AL+ + M E ++ D + LI + A
Sbjct: 528 PDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQAS 587
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
LF+E K + D L+ + G VE D+++ M N + + A+V+G
Sbjct: 588 ALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGL 647
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A + E+++S GC+P +TY S++ A CR + A ++ E++ G+D
Sbjct: 648 CKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDT 707
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V Y+ +V K+G+ A+ ++ +M KG P+V YN+L+D +A +L + +L +
Sbjct: 708 VTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGD 767
Query: 495 MERRK---VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
M R P+ V+Y+ +I+ + D + E R ++ + +
Sbjct: 768 MSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMM-------RKSCDVLPNIITY 820
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
S ++ L K Q M +E +L M +LRD L++
Sbjct: 821 NSFLDGLCK--QSMMAEACEL--------MRSLRDGSLRV 850
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 133/594 (22%), Positives = 249/594 (41%), Gaps = 86/594 (14%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F+ ++G+ K A YN +L E P+K T +LI ++ ++
Sbjct: 530 PDTYAFNCCINGLSKLGDVSR-ALQVYNRMLEL-ELVPDKVTFNILIAGACKAGNFEQAS 587
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+L E+ N+ PD T L+ +A + + A +L + G ++ +N+ + G
Sbjct: 588 ALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGL 647
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K E+M S+G V DS Y ++ A + ++ L E KS D
Sbjct: 648 CKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDP-- 705
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
T Y IL D L KSG+ +A+ +M KG D Y +LI S +++ A L
Sbjct: 706 -DTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL 764
Query: 317 -------------------------------FKEAEE--KGMLRDPEVCLKLVLMY--IE 341
EA E + M+R L ++ Y
Sbjct: 765 HGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFL 824
Query: 342 EGLVEKTL-----DVVESMKNAKLKIS-DCIS-CAIVNGFSKRRGYWAAVKVYEQLISQG 394
+GL ++++ +++ S+++ L++S D ++ +++G K A V++ +I+ G
Sbjct: 825 DGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGG 884
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
+P VTY ++N C+ +A + M KG V+ YS +V + K + +A+
Sbjct: 885 YVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEAL 944
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME-RRKVTPDKVSYTTVISA 513
L+ M ++GC PNV +NS++D ++ + +++ +M + + PDK++Y T+I
Sbjct: 945 ELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDG 1004
Query: 514 YNRAR------------------EFDMCVKFYNEFRMNGGVIDRAIA------------- 542
R F+ C+ ++ G + RA+
Sbjct: 1005 LFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKL----GDVSRALHRMLELELVPDKVT 1060
Query: 543 -GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
I++ K E+ L ++M ++ + D + + ++ L AG Q++A W
Sbjct: 1061 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG-QVEATW 1113
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 164/380 (43%), Gaps = 12/380 (3%)
Query: 224 YCQIMEAYYKIG-DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFF 282
Y ++ A YK G D E+ F +S S Y I+ SL ++G AL+ F
Sbjct: 149 YSTLLRATYKAGGDVERTLGFFRRIRSSS-----RSVADYNIVLQSLCRAGETARALEIF 203
Query: 283 R-DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
R +M G+ Y ++I E+ ELF+E E+G D L+ +
Sbjct: 204 RGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCK 263
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC--IPGQ 399
G +E+ + M + + ++NG K A ++ +++ + C +P
Sbjct: 264 AGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNI 323
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMWLV 457
+TY S ++ C+ ++ ++A ++ ++ V +S+++ K G+I +A +
Sbjct: 324 ITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVF 383
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
M A G PNV YN+L++ +A + + + + M + VTPD ++Y+ ++ A+ +A
Sbjct: 384 DDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 443
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK-SEGTKLDERL 576
D ++ + G + ++ K + E ++ DM G D+
Sbjct: 444 SRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKIT 503
Query: 577 YHSAMNALRDAGLQMQAQWL 596
Y + ++ L G QA+ L
Sbjct: 504 YCTLIDGLFRTGRAGQAEAL 523
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 158/382 (41%), Gaps = 37/382 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D+ FST L D L K G+ EA F DM G + + Y +L+ +++
Sbjct: 359 DTVTFST-----LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 413
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A + + +KG+ D LV + + V++ L+++ M + + +I++
Sbjct: 414 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 473
Query: 373 GFSKRRGYWAAVKVYEQL-ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK--- 428
G K A ++++ + + G +P ++TY ++I+ R +AE + M
Sbjct: 474 GLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTY 533
Query: 429 GFDKCV----------------------------VAYSSMVAMYGKTGRIRDAMWLVAKM 460
F+ C+ V ++ ++A K G A L +M
Sbjct: 534 AFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEM 593
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
AK +P+V + +L+D +A + + M V P+ V+Y ++ ++
Sbjct: 594 VAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRI 653
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ +F E +G V D G +V + S+ ++ ++L+ ++KS G D Y+
Sbjct: 654 EEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNIL 713
Query: 581 MNALRDAGLQMQAQWLQQNFEG 602
++ L +G QA + + G
Sbjct: 714 VDGLWKSGQTEQAITVLEEMVG 735
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/458 (19%), Positives = 194/458 (42%), Gaps = 29/458 (6%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VPD+ + S ++ + + +T + A +E K + P+ T +L+ L +S + +
Sbjct: 669 VPDSITYGSLVYALCRASRTDD-ALQLVSELKSF-GWDPDTVTYNILVDGLWKSGQTEQA 726
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA----------L 186
+++ E+ PD T + L+ S +A + A L G+++ +
Sbjct: 727 ITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL------HGDMSSRVSRCCVPNV 780
Query: 187 LAFNSAMGGYNKL-HMYYSTILVYEKM-KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+ ++ + G K+ + + L+ E M KS ++ + Y ++ K + L
Sbjct: 781 VTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELM 840
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ L +P T + L D L K G+ EA F DM G + + Y L+
Sbjct: 841 RSLRDGSLRVSP-DTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGL 899
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+++ A + + +KG+ D LV + + V++ L+++ M + +
Sbjct: 900 CKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNV 959
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQL-ISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+I++G K A ++++ + + G P ++TY ++I+ R +AE +
Sbjct: 960 VTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLD 1019
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M D A++ + K G + A+ + +++ P+ +N L+ +A
Sbjct: 1020 AMP----DPDTYAFNCCINGLSKLGDVSRALHRMLELELV---PDKVTFNILIAGACKAG 1072
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
N Q L++EM + + PD +++ +I +A + +
Sbjct: 1073 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 173/370 (46%), Gaps = 3/370 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V MK+ I D+ Y ++ + K G+ LF E K +K+ F T Y +
Sbjct: 344 VLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKI-VPDFVT--YTSMIH 400
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L ++G+ EA K F +M KG+ D Y +LI + E+K A L + EKG+
Sbjct: 401 GLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTP 460
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ LV + G V+ +++ M L+ + C A++NG K AVK+
Sbjct: 461 NVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLM 520
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
E++ G P +TY +I++AYC++ +KA ++ M KG +V ++ ++ + +
Sbjct: 521 EEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMS 580
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G + D L+ M KG PN +NSLM + N+R +++K M + V PD +Y
Sbjct: 581 GMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTY 640
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+I + +AR + E G + A ++ F K + EE KL ++M++
Sbjct: 641 NILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRT 700
Query: 568 EGTKLDERLY 577
G ++ +Y
Sbjct: 701 HGFIAEKEIY 710
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 194/446 (43%), Gaps = 17/446 (3%)
Query: 112 EFR---PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKF 168
EFR P+ + +++ Q ++ ++ L E+ + + P+ +T + +++ + +
Sbjct: 279 EFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRV 338
Query: 169 KIANTLLQVF----ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
A +L+V I + S G + + Y ++++MK IV D Y
Sbjct: 339 VEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYK---LFDEMKRKKIVPDFVTY 395
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
++ + G + LF E S+ L + Y L D K+G EA
Sbjct: 396 TSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVT---YTALIDGYCKAGEMKEAFSLHNQ 452
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEE 342
M EKG+ + Y +L+ EV +A EL E EKG+ P VC L+ +
Sbjct: 453 MVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGL--QPNVCTYNALINGLCKV 510
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
G +E+ + ++E M A I++ + K A ++ ++ +G P VT+
Sbjct: 511 GNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTF 570
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
++N +C + E++ M KG ++S++ Y +R + + M A
Sbjct: 571 NVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHA 630
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
+G P+ YN L+ H +A+N+++ L KEM + + SY ++I + + ++F+
Sbjct: 631 QGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEE 690
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGV 548
K + E R +G + ++ I I V V
Sbjct: 691 ARKLFEEMRTHGFIAEKEIYDIFVDV 716
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 155/333 (46%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
++T Y I+ L + G+ EA M+ +G + D Y+ ++ + + ++ +L
Sbjct: 250 WNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKL 309
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+E + KG+ + ++ + G V + V+ MKN ++ + + +++GF K
Sbjct: 310 MEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGK 369
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
K+++++ + +P VTY S+I+ C+ +A K+F EM KG V
Sbjct: 370 SGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVT 429
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++++ Y K G +++A L +M KG PNV Y +L+D + + +L EM
Sbjct: 430 YTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMS 489
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ + P+ +Y +I+ + + VK E + G D ++ + K+ ++
Sbjct: 490 EKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMA 549
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ +LL+ M +G + ++ MN +G+
Sbjct: 550 KAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGM 582
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 182/421 (43%), Gaps = 8/421 (1%)
Query: 167 KFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
K K A++LL G + +++++ + GY ++ + + E+++ G+ + Y
Sbjct: 267 KVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYN 326
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
I+ K G + + K++++ D+ ++T L GKSG K F
Sbjct: 327 SIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTT-----LISGFGKSGNVSVEYKLFD 381
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+MK K I+ D Y S+I +V A +LF E KG+ D L+ Y + G
Sbjct: 382 EMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAG 441
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
+++ + M L + A+V+G K A ++ ++ +G P TY
Sbjct: 442 EMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYN 501
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
++IN C++ +A K+ EM GF + Y++++ Y K G + A L+ M K
Sbjct: 502 ALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDK 561
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
G +P + +N LM+ + L E+L K M + + P+ ++ +++ Y
Sbjct: 562 GLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRAT 621
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++ Y G V D I++ K ++E L ++M +G L Y+S +
Sbjct: 622 IEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKG 681
Query: 584 L 584
Sbjct: 682 F 682
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 149/319 (46%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
A + FR+ E G+ + Y ++ + +VK A L + E +G + D +V
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
Y + + K L ++E ++ LK + +I++ K A +V + +Q P
Sbjct: 296 GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFP 355
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
V Y ++I+ + + S K+F EM++K V Y+SM+ + G++ +A L
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
++M +KG +P+ Y +L+D + +A +++ L +M + +TP+ V+YT ++ +
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
E D+ + +E G + ++ K+ IE+ VKL+++M G D Y
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITY 535
Query: 578 HSAMNALRDAGLQMQAQWL 596
+ M+A G +A L
Sbjct: 536 TTIMDAYCKMGEMAKAHEL 554
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 161/347 (46%), Gaps = 11/347 (3%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS----IYASLICSFASITEVKLAEEL 316
++ + L ++G EA K F + G+L A L SF I + A +
Sbjct: 183 VFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGI---RTAFRV 239
Query: 317 FKEAEEKGMLRDPEVCLKLVL-MYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGF 374
F+E E G+ + V ++L + + G V++ ++ M+ + + D +S IV+G+
Sbjct: 240 FREYSEVGVCWNT-VSYNIILHLLCQLGKVKEAHSLLIQME-FRGNVPDVVSYSVIVDGY 297
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+ +K+ E+L +G P Q TY SII+ C+ +AE+V M+ +
Sbjct: 298 CQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDN 357
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V Y+++++ +GK+G + L +MK K P+ Y S++ +A + + KL+ E
Sbjct: 358 VVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSE 417
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M + + PD+V+YT +I Y +A E +N+ G + +V K +
Sbjct: 418 MLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGE 477
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
++ +LL +M +G + + Y++ +N L G QA L + +
Sbjct: 478 VDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMD 524
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 203/424 (47%), Gaps = 5/424 (1%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYST 205
N++P+A+ + L+ +A K +IA L G ++ + F+ + +
Sbjct: 443 NIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEA 502
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ + + S G++LD Y +M+ ++K G E A +E + K S PF Y +L
Sbjct: 503 EELLKDVTSRGLLLDHVNYTSLMDGFFKAG-KESAALNMVEEMTEK--SIPFDVVTYNVL 559
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ L + G+ +EA + M E G+ + + Y +I ++ E+ A EL+ E + +
Sbjct: 560 INGLLEHGK-YEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKI 618
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ C LV+ E G +EK ++V+ M + + I ++N SK A ++
Sbjct: 619 MPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQ 678
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++EQL+ G Q Y ++I +CR+ + KA V M + GF V Y++++ Y
Sbjct: 679 MHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYC 738
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
++ ++ A+ +M +G PN+ YN L+ A + + ++L+ +M+ + PD
Sbjct: 739 ESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDAS 798
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y T+IS Y + ++ Y E G V + +++ F+K+ ++++ +LL +M
Sbjct: 799 TYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEM 858
Query: 566 KSEG 569
+ G
Sbjct: 859 QVRG 862
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/457 (20%), Positives = 192/457 (42%), Gaps = 19/457 (4%)
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVY 209
D TC+ LV R K ++ ++ G ++ FN+ + GY K + +
Sbjct: 111 DTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLV 170
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-CKSRKL-DSTPFSTH------- 260
E+M+ G++ D Y ++ + K G+ +K +L E +SR + DS F+
Sbjct: 171 ERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDD 230
Query: 261 ---------MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
Y + + K EA + +M G L D Y+S++ +
Sbjct: 231 NLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLS 290
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A+EL +E ++ G+ + L+ + G + + + + + +V
Sbjct: 291 EAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLV 350
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+G K A ++ L IP +TY ++I+ YC++ + E + EM++K +
Sbjct: 351 DGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHIN 410
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
V+ YSS++ Y K G + +A+ ++ KM + PN ++Y L+D + +A L
Sbjct: 411 PNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDL 470
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+ EM+ + + V + +++ R + D + + G ++D ++ F K
Sbjct: 471 YNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFK 530
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ + ++++M + D Y+ +N L + G
Sbjct: 531 AGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHG 567
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 208/496 (41%), Gaps = 11/496 (2%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQS-KKWDS 135
+PD + S ++G+ KD + E A + E KK+ P LI L ++ W++
Sbjct: 270 LPDVVTYSSIVNGLCKDGRLSE-AQELLREMKKMG-VDPNHVAYTTLIDSLFKAGSAWEA 327
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMG 194
S+ + + D C+ LV ++ K K A + + I + + + +
Sbjct: 328 FACQSQ-LVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALID 386
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
GY K+ + ++M+ I + Y I+ Y K G ++ + + LD
Sbjct: 387 GYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEA----INVMKKMLDQ 442
Query: 255 TPF-STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+ ++Y IL D K+G+ A + +MK G+ + ++ L+ + + A
Sbjct: 443 NIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEA 502
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
EEL K+ +G+L D L+ + + G L++VE M + ++NG
Sbjct: 503 EELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLING 562
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+ G + A VY +I G P Q TY +I AYC+ A +++ EM+
Sbjct: 563 LLEH-GKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPS 621
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ +++V + G I AM ++ +M G PN+ I+ L++ ++ V ++ +
Sbjct: 622 SITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHE 681
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
++ + ++ +Y +I + R R +G V D ++ + + S
Sbjct: 682 QLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESS 741
Query: 554 QIEELVKLLQDMKSEG 569
+++ + M +EG
Sbjct: 742 HVKKALATYTQMLNEG 757
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 181/443 (40%), Gaps = 34/443 (7%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
LL +N + +N + +Y +M + + + + ++ A+ K+G+ +A
Sbjct: 9 TLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNL-ILALDL 67
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
L ++D+ ++T ++ + G +A F M +K D L+ F
Sbjct: 68 LRNVDVEVDTVTYNTVIW-----GFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGF 122
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
I K E + G +D L+ Y + G + LD+VE M+ L +SD
Sbjct: 123 CRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGL-LSD 181
Query: 365 CIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV---------------------TY 402
+S ++NGF KR Y A + ++ + V TY
Sbjct: 182 IVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITY 241
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+II+ YC+ +A ++ EM GF VV YSS+V K GR+ +A L+ +MK
Sbjct: 242 TTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKK 301
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
G +PN Y +L+D +A + + ++ R +T D V TT++ ++ +
Sbjct: 302 MGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKE 361
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ + + ++ + K+ +E + LLQ+M+ + + Y S +N
Sbjct: 362 AEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIIN 421
Query: 583 -----ALRDAGLQMQAQWLQQNF 600
+ D + + + L QN
Sbjct: 422 GYTKKGILDEAINVMKKMLDQNI 444
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 99/503 (19%), Positives = 189/503 (37%), Gaps = 85/503 (16%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
Q +P+A + + G K + QE+A D YNE K L + +L+ L + K+
Sbjct: 442 QNIIPNAYVYAILIDGYCKAGK-QEIATDLYNEMK-LSGLKVNNVLFDVLVNNLKRGKRM 499
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNS 191
D L +D +L D + L+ +A K A +++ +T+ I ++ +N
Sbjct: 500 DEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEE-MTEKSIPFDVVTYNV 558
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ G + H Y VY M G+ + Y +++AY K G+ + L+ E KS K
Sbjct: 559 LINGLLE-HGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHK 617
Query: 252 LDSTPFSTH--------------------------------MYKILCDSLGKSGRAFEAL 279
+ + + + ++++L ++ KSG+A L
Sbjct: 618 IMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVL 677
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
+ + + G+ + Y +LI F + K A + K G + D L+ Y
Sbjct: 678 QMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGY 737
Query: 340 IEEGLVEKTL-----------------------------------DVVESMKNAKLKISD 364
E V+K L ++ + MK L
Sbjct: 738 CESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDA 797
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++G+ K ++++Y ++++QG +P TY +I+ + ++ +A ++ E
Sbjct: 798 STYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNE 857
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRI------------RDAMWLVAKMKAKGCEPNVWIY 472
MQ +G Y ++ + + DA L+ +M KG P
Sbjct: 858 MQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTI 917
Query: 473 NSLMDMHGRAKNLRQVEKLWKEM 495
+ R + EKL KE+
Sbjct: 918 ACISSTFARPGKMLDAEKLLKEI 940
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 216/478 (45%), Gaps = 6/478 (1%)
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
S LK +R Q W + + + + V PD+ S +A+C AR+++ A LL
Sbjct: 152 SHLKATLREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLAS 211
Query: 178 FITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
G +L ++SA+ K+ + + + MK G+ + Y + A K G
Sbjct: 212 MAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQ 271
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
E L E + L + Y + D+ K G+ A + +M KG++ +
Sbjct: 272 WETAVDLLKEMPAVGLAPDVIT---YSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIIT 328
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y+ +I + A + + A L +E +E G+ D + ++G E+ + ++ M
Sbjct: 329 YSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMP 388
Query: 357 NAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+ + IS IV +RG W A+ + +++ + G P + Y++ I+A + + +
Sbjct: 389 MEGV-TPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRW 447
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+A + EM G V++Y+S + KTGR + A+ L+ +M A G P+V Y+++
Sbjct: 448 EQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAV 507
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ + + L++EM+R+ +TPD VS T I+A + ++ + E G
Sbjct: 508 IASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGL 567
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
V D + +K + +E++ LL++M + G D Y AM+A GL +A
Sbjct: 568 VPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEA 625
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 188/424 (44%), Gaps = 17/424 (4%)
Query: 111 PEFR-----PEKSTLKLLIRYLV------QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
P FR P K + +I Y + + +W+ V+L + + V PD T S +
Sbjct: 309 PAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTI 368
Query: 160 ASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
++C + +++ A LL+ +G +++ + K + I + ++M++ G+
Sbjct: 369 SACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVP 428
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
D Y ++A + E+ L E + L S Y D+ K+GR+ A
Sbjct: 429 PDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVIS---YNSAIDACAKTGRSKIA 485
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
++ R+M G+ D Y+++I S A + + A +LF+E + +G+ D C +
Sbjct: 486 VELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINA 545
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISC-AIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
+ G E+ LDV+ M L + D IS ++ +K + + + ++ + G P
Sbjct: 546 CAQGGWWEEALDVLGEMPTMGL-VPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTP 604
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
++Y ++A L+ +A + +M G VV Y+S + K GR ++A L+
Sbjct: 605 DAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLL 664
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+M G P+V +N+ +D G ++ EM V+P++ +Y T + A R
Sbjct: 665 RQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATYLTAMYACKRC 724
Query: 518 REFD 521
E D
Sbjct: 725 GEKD 728
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 178/444 (40%), Gaps = 43/444 (9%)
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LL 187
+ +W++ V L ++ + PD T S ++ +C + +++ A LL T G +A ++
Sbjct: 268 KGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANII 327
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
++ +G K + + + +M+ G+ D Y + A K G E+ L E
Sbjct: 328 TYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREM 387
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED-------------- 293
+ S Y I+ + K GR EA+ ++M+ G+ D
Sbjct: 388 PMEGVTPNAIS---YGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQA 444
Query: 294 -------------------PSI--YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
P++ Y S I + A K+A EL +E G+ D +
Sbjct: 445 SRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPD-VIT 503
Query: 333 LKLVLMYIEEGL-VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYEQL 390
V+ G E+ LD+ M+ + D +SC + G+W A+ V ++
Sbjct: 504 YSAVIASCAMGRQWEEALDLFREMQRQGI-TPDVVSCNTAINACAQGGWWEEALDVLGEM 562
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+ G +P ++Y + I+A + + + + EM G ++Y ++ G
Sbjct: 563 PTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLW 622
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
++A+ L+ M A G P+V YNS ++ + ++ L ++M + PD S+
Sbjct: 623 KEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAA 682
Query: 511 ISAYNRAREFDMCVKFYNEFRMNG 534
I A ++ V+ E R G
Sbjct: 683 IDACGNGDQWGTAVEVLFEMRALG 706
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 140/328 (42%), Gaps = 37/328 (11%)
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+AL M+E+G+ D Y+S I + + + + A EL +G D V
Sbjct: 169 KALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPD-------V 221
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
L Y S +CA V+ + + AV + + QG
Sbjct: 222 LTYS----------------------SAIAACAKVSRWKE------AVGLLRSMKGQGVK 253
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + Y++ I+A + + A + EM G V+ YS+++ K G+ A L
Sbjct: 254 PNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRL 313
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ +M KG N+ Y+ ++ + + L +EM+ V PD ++Y++ ISA +
Sbjct: 314 LMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAK 373
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+++ V E M GV AI+ GI++ +K + E + LLQ+M++ G D
Sbjct: 374 KGQWEEAVGLLREMPME-GVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVI 432
Query: 576 LYHSAMNALRDAGLQMQAQWLQQNFEGT 603
Y +A++A A QA WL + T
Sbjct: 433 NYSAAIDACAQASRWEQALWLLREMPAT 460
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 132/580 (22%), Positives = 246/580 (42%), Gaps = 85/580 (14%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A+ +++E K +P+ + +I L ++ + L + +P A+ +
Sbjct: 266 DMAWKFFHELKA-QGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNT 324
Query: 158 LVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMK--- 213
++ A +F+ A LL+ G I ++++FNS + K + ++E MK
Sbjct: 325 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA 384
Query: 214 -----SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----------CKSRKLDSTPF 257
+ I++D C +E Y+I D + A+LF CK+RKL+
Sbjct: 385 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEA-- 442
Query: 258 STHMYKI------------------LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
YKI L D LGK G+ EA + F M + G +P +Y S
Sbjct: 443 ----YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 498
Query: 300 LI------------------------------------CSFASITEVKLAEELFKEAEEK 323
LI C F + EV+ +F++
Sbjct: 499 LIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKA-GEVEKGRMIFEDIRSY 557
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G L D L+ + G +T ++ +MK + A+V+GF K A
Sbjct: 558 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 617
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
++ E++ + P TY +I++ +I +A +F E + KG + VV YSS++
Sbjct: 618 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 677
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+GK GRI +A ++ +M KG PNV+ +NSL+D +A+ + + ++ M+ K P+
Sbjct: 678 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPN 737
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+Y+ +I+ R ++++ F+ + + G V + M+ +K+ I + L +
Sbjct: 738 TYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFE 797
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
K+ G D +++ + + +A M+A Q FE T
Sbjct: 798 RFKANGGIPDAASFNALIEGMSNANRAMEA---YQVFEET 834
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 226/511 (44%), Gaps = 11/511 (2%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P F+S L + K + E A + KK E P ST ++I L + +
Sbjct: 351 IPSVVSFNSILTCLGKKRKVDE-ALSLFEVMKKDAE--PNSSTYNIIIDMLCLGGRVEEA 407
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+ ++ + ++ P+ T + +V +ARK + A + + G + + S + G
Sbjct: 408 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 467
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR--KLD 253
K ++EKM AG + Y ++ ++ G E +F E R K D
Sbjct: 468 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPD 527
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
T +T+M D + K+G + F D++ G L D Y+ LI + +
Sbjct: 528 LTLLNTYM-----DCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 582
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+F +++G D +V + + G V K +++E MK ++ + AIV+G
Sbjct: 583 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 642
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+K A ++E+ S+G V Y+S+I+ + ++ +A + EM +KG
Sbjct: 643 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 702
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V ++S++ K I +A+ MK C PN + Y+ L++ R + + W+
Sbjct: 703 VYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQ 762
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
+M+++ + P+ V+YTT+IS + + F+ NGG+ D A ++ S +
Sbjct: 763 DMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNAN 822
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ E ++ ++ + G +++ + S ++AL
Sbjct: 823 RAMEAYQVFEETRLRGCRINIKSCISLLDAL 853
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 193/480 (40%), Gaps = 49/480 (10%)
Query: 149 LPDAHTCSRLVASCVRARKFKIANTLLQVFITDG---EIALLAFNSAMGGYNKLHMYYST 205
LP+ C+ L A+ VRAR+ + +L V + A A+ +G +
Sbjct: 142 LPN-QACAHLAAALVRARRLD--DAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERA 198
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ + +M+ G + + ++ A + G AL E K L+ +Y +
Sbjct: 199 LELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEP---DIVLYNVC 255
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
D GK+G A KFF ++K +G+ D Y S+I + AEELF + E +
Sbjct: 256 IDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS 315
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ +++ Y G E ++E ++ S +I+ K+R A+
Sbjct: 316 VPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALS 375
Query: 386 VYEQL--------------ISQGCIPGQV--------------------TYASIINAYCR 411
++E + I C+ G+V T +++ C+
Sbjct: 376 LFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCK 435
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+A K+F Q+G + V Y S++ GK G++ +A L KM G N +
Sbjct: 436 ARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 495
Query: 472 YNSLMD---MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
Y SL+ +HGR ++ K++KE+ RR PD T + +A E + +
Sbjct: 496 YTSLIRNFFIHGRKED---GHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFE 552
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ R G + D I++ +K Q E + MK +G LD R Y++ ++ +G
Sbjct: 553 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG 612
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 109/256 (42%)
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
E++ +E G + C L + ++ + V M+ K + + ++
Sbjct: 129 EKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGA 188
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
++ R A+++ Q+ G G + +++ A R + A + E++ +
Sbjct: 189 LAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPD 248
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+V Y+ + +GK G + A ++KA+G +P+ Y S++ + +A L + E+L+
Sbjct: 249 IVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFA 308
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
+ME + P +Y T+I Y A F+ K R G + ++ K
Sbjct: 309 QMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 368
Query: 554 QIEELVKLLQDMKSEG 569
+++E + L + MK +
Sbjct: 369 KVDEALSLFEVMKKDA 384
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 181/394 (45%), Gaps = 4/394 (1%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
LL+R VQ++K K + + C+ L+ V+ +A + Q +
Sbjct: 32 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 91
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G ++ + N + K +T M+ G+ D Y ++ AY + G E+
Sbjct: 92 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 151
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
L + L F+ Y + + L K+G+ A +M + G+ D + Y L
Sbjct: 152 FELMDSMSGKGLKPCVFT---YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 208
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ + AE +F E +G++ D L+ + + G +++ L MKNA L
Sbjct: 209 LVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGL 268
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ I ++ GF + A+KV ++++ QGC+ VTY +I+N C+ + S+A++
Sbjct: 269 APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADE 328
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+F EM ++G +++++ Y K G + A+ L M + +P+V YN+L+D
Sbjct: 329 LFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFC 388
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ + +V +LW +M R++ P+ +SY +I+ Y
Sbjct: 389 KGSEMEKVNELWNDMISRRIYPNHISYGILINGY 422
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 208/471 (44%), Gaps = 45/471 (9%)
Query: 84 DSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDF 143
+S L G++K +LA++ Y E + + TL ++I L +++K ++ S D
Sbjct: 66 NSLLGGLVKVGWV-DLAWEIYQEVVR-SGVQVNVYTLNIMINALCKNQKIENTKSFLSDM 123
Query: 144 KIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMY 202
+ V PD T + L+ + R + A L+ G + + +N+ + G K Y
Sbjct: 124 EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 183
Query: 203 YSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFSTH 260
V ++M G+ D+ Y ++ + + +F E S+ + D FS
Sbjct: 184 LRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA- 242
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA--------------- 305
L L K+G +ALK+FRDMK G+ D IY LI F
Sbjct: 243 ----LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM 298
Query: 306 -----------------SITEVKL---AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+ + K+ A+ELF E E+G+ D L+ Y ++G +
Sbjct: 299 LEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNM 358
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
K + + E M LK +++GF K +++ +IS+ P ++Y +
Sbjct: 359 NKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGIL 418
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
IN YC + S+A +++ EM +KGF+ ++ +++V Y + G A ++ M KG
Sbjct: 419 INGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 478
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
P+ YN+L++ + +N+ + L +ME + PD ++Y +++ ++R
Sbjct: 479 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 529
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%)
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+P ++ L+ ++ +++ E F+ + KG+ C L+ ++ G V+ ++
Sbjct: 26 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ + + ++++ ++N K + + +G P VTY ++INAYCR
Sbjct: 86 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
L +A ++ M KG CV Y++++ KTG+ A ++ +M G P+ Y
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N L+ R N+ E+++ EM + V PD VS++ +I ++ D +K++ + +
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 265
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G D I I++G F + + E +K+ +M +G LD Y++ +N L
Sbjct: 266 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGL 317
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 218/459 (47%), Gaps = 4/459 (0%)
Query: 121 KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
KLL + + +D+++SLS+ ++ + P+ T + L+ + + ++L I
Sbjct: 95 KLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIK 154
Query: 181 DG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
G + ++ F + + G K + + +++ M + G D Y I+ K+G++
Sbjct: 155 LGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAA 214
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
A L K ++ P Y L DSL K EAL F MK KGI Y S
Sbjct: 215 AAGLIK--KMGEVGCQP-DVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTS 271
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
LI S + K A + E ++ D L+ ++ +EG V + V+++M
Sbjct: 272 LIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMG 331
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
++ + ++++G+S + A K+++ +I++GC P +Y+ +IN YC + +A+
Sbjct: 332 VEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAK 391
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
++F EM +G V+Y++++ + + G++R+A L M G P++ Y+ L++
Sbjct: 392 QLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGF 451
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+ L + +L++ M+ + P+ V YT +I + ++ + K ++E ++G D
Sbjct: 452 CKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDV 511
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
I ++ K ++E ++ + M+ +G +E Y+
Sbjct: 512 QIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYN 550
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 185/411 (45%), Gaps = 18/411 (4%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEK-MKSAGIVLDS-------GCYCQIMEAYYKIGDS 237
++ FN + ++ YY ++ K M+ AG+ ++ C+C +
Sbjct: 90 IIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVL 149
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
KV L L+ P + + L + L K+G +AL+ F DM +G D Y
Sbjct: 150 AKVIKLGLQ---------P-TIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTY 199
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++I + E A L K+ E G D L+ ++ LV + LD+ MK
Sbjct: 200 TTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKA 259
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ + +++ G + A + ++ S +P VT++ +I+ +C+ +
Sbjct: 260 KGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLE 319
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A+ V M + G + V+ Y+S++ Y + +A L M +GC+P+V+ Y+ L++
Sbjct: 320 AQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILIN 379
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ K + + ++L+ EM + +TP+ VSYTT+I A+ + + + + + NG +
Sbjct: 380 GYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLP 439
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
D +++ F K + + +L + M+ K + +Y ++++ +G
Sbjct: 440 DLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSG 490
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/389 (19%), Positives = 142/389 (36%), Gaps = 76/389 (19%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + + + KD E A D ++ K P + LI+ L +W
Sbjct: 229 PDVVTYSTLIDSLCKDRLVNE-ALDIFSYMKA-KGISPTVVSYTSLIQGLCSFSRWKEAS 286
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
++ + N++PD T S L+ + A +L+ G E ++ +NS M GY
Sbjct: 287 AMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGY 346
Query: 197 N--------------------KLHMYYSTILV---------------YEKMKSAGIVLDS 221
+ K ++ +IL+ + +M G+ ++
Sbjct: 347 SLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNT 406
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y ++ A+ ++G + LF K + Y +L + K G +A +
Sbjct: 407 VSYTTLIHAFCQLGKLREARELF---KDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRL 463
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
FR M+ + + +Y LI S + A +LF E G+ D ++ ++ +
Sbjct: 464 FRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCK 523
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
EGL+++ L+ M+ GC P + +
Sbjct: 524 EGLLDEALEAFRKME-----------------------------------EDGCPPNEFS 548
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGF 430
Y II + + S+A ++ EM+ KGF
Sbjct: 549 YNVIIRGFLQHKDESRAVQLIGEMRDKGF 577
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 117/533 (21%), Positives = 232/533 (43%), Gaps = 21/533 (3%)
Query: 39 PFVTVNPSSII-NHRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQ 97
PF+ P + NH F + ST P++ N D F+ +
Sbjct: 30 PFLPDFPCFLFFNHHHFLTSTSTKKPSLPKNNDG--------------FVSNNSNNVCVD 75
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
+ +Y + P RP + + K++ ++VSL ++ V + ++ +
Sbjct: 76 DALASFYRMVRINP--RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133
Query: 158 LVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+ R + ++L ++F + FN+ + G + ++ +M G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
+ Y ++ K G++ +F K + + + Y + DSL K
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVF---KKMEQNGCKPNVVTYSTIIDSLCKDRLVN 250
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+A++F +M E+GI + Y S++ F ++ ++ A LFKE + ++ + LV
Sbjct: 251 DAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILV 310
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+EG+V + V E+M ++ A+++G+ +R A KV+E +I +GC
Sbjct: 311 DGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCA 370
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
PG +Y +IN YC+ +A+ + EM K + V YS+++ + GR ++A+ L
Sbjct: 371 PGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNL 430
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+M + G PN+ Y L+D + +L + KL K M+ +K+ P+ V YT +I
Sbjct: 431 FKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFI 490
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
A + ++ + +++ +G D +M+ K +E L + M+ +G
Sbjct: 491 AGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG 543
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 138/350 (39%), Gaps = 35/350 (10%)
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
C L + + IL + L + ++ M + GI D + +LI +
Sbjct: 116 CNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCN 175
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
++K A ELF E ++G +P V + Y
Sbjct: 176 EGKIKEAVELFNEMVKRG--HEPNV-----ISYT-------------------------- 202
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
++NG K AV V++++ GC P VTY++II++ C+ L + A + EM
Sbjct: 203 --TVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMV 260
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
++G V Y+S+V + G++ +A L +M + PN + L+D + +
Sbjct: 261 ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVS 320
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ +++ M + V PD +Y ++ Y R + K + G I++
Sbjct: 321 EARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILI 380
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ K +++E LL +M + D Y + M L G +A L
Sbjct: 381 NGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNL 430
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 172/416 (41%), Gaps = 16/416 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + + ++G+ K T +A D + + ++ +P T +I L + + + +
Sbjct: 196 PNVISYTTVINGLCKTGNTS-MAVDVFKKMEQ-NGCKPNVVTYSTIIDSLCKDRLVNDAM 253
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-DGEIALLAFNSAMGGY 196
+ + P+ T + +V + A L + + D + F + G
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY---YKIGDSEKVAALFLECKSRKLD 253
K M LV+E M G+ D Y +M+ Y + +++KV E RK
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKV----FEIMIRK-G 368
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
P H Y IL + KS R EA +M K + D Y++L+ + K A
Sbjct: 369 CAP-GAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEA 427
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
LFKE G P + ++L+ + + G +++ L +++SMK KL+ + ++
Sbjct: 428 LNLFKEMCSYG--PHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILI 485
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
G A +++ +L G P TY +I + L +A +F +M+ GF
Sbjct: 486 EGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFL 545
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
+Y+ M+ + + A+ L+ +M K N+ + L+D+ + + + Q
Sbjct: 546 PNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQDEIISQ 601
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 159/326 (48%), Gaps = 5/326 (1%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA--SLICSFASITEVKLAEELFKE 319
Y IL D K GR EA + + +M G+ +PSIY SL+ +F T++K A ELFK
Sbjct: 46 YNILIDGYAKKGRVDEANRLYEEMVSVGL--EPSIYTYNSLLNAFCKETKMKEAMELFKT 103
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV-ESMKNAKLKISDCISCAIVNGFSKRR 378
EKG D ++ + G V + L+++ M + A++NG K
Sbjct: 104 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDE 163
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A K+ E++ S+G +P +TY +I++ CR+ S+A++ F M +G+ VVAY+
Sbjct: 164 NIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYN 223
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
++ K G+ +AM L + AKG P+ YNS++ R N+ + E+++K+M
Sbjct: 224 GLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS 283
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
P+ +Y+ V+S + RA++ D K E G V D I++ K + +++
Sbjct: 284 GCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKA 343
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNAL 584
+L M G D Y +N L
Sbjct: 344 HELFSTMVDNGCAPDIVSYSVVLNGL 369
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 200/490 (40%), Gaps = 42/490 (8%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
E P + T +++++ + K L E + PD + L+ + + A
Sbjct: 3 ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
N L + ++ G E ++ +NS + + K + +++ M G D Y I+
Sbjct: 63 NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122
Query: 231 YYKIGD-SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
K G +E + LF + R + +T Y L + L K A K +M KG
Sbjct: 123 LCKTGKVTEALEMLFHKMIERGCSA---NTVAYNALINGLCKDENIERAYKLLEEMASKG 179
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
+ D Y +++ + +V A++ F +G D L+ +EG ++ +
Sbjct: 180 YVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAM 239
Query: 350 DVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+ + + AK + D ++ +I+ G +++ A ++++++++ GC P TY+ +++
Sbjct: 240 KLFKDVI-AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSG 298
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+CR A KV EM + G VV Y+ ++ KT + A L + M GC P+
Sbjct: 299 HCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 358
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ Y+ +++ + + L+ M RK+ PD V++
Sbjct: 359 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFN-------------------- 398
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
I++ K +++E LL M G D Y++ MN LR G
Sbjct: 399 ---------------ILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQG 443
Query: 589 LQMQAQWLQQ 598
+QA L Q
Sbjct: 444 RHIQADRLTQ 453
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 179/429 (41%), Gaps = 9/429 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ + G K + E A Y E + P T L+ + K +
Sbjct: 41 PDGIEYNILIDGYAKKGRVDE-ANRLYEEMVSVG-LEPSIYTYNSLLNAFCKETKMKEAM 98
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA-NTLLQVFITDGEIA-LLAFNSAMGG 195
L + PD T S +++ + K A L I G A +A+N+ + G
Sbjct: 99 ELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALING 158
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K + E+M S G V D+ Y I+ ++G + F SR
Sbjct: 159 LCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPD 218
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y L D+L K G+ EA+K F+D+ KG + D Y S++ A + + AEE
Sbjct: 219 VVA---YNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEE 275
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV-NGF 374
+FK+ G + ++ + V+ V+E M + D ++ I+ +G
Sbjct: 276 MFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIG-AVPDVVTYNILLDGL 334
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A +++ ++ GC P V+Y+ ++N C+ A +F M ++ V
Sbjct: 335 CKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDV 394
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V ++ ++ K G++ +A L+ +M GC P+ YN+LM+ + Q ++L +
Sbjct: 395 VTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQA 454
Query: 495 MERRKVTPD 503
M+ + D
Sbjct: 455 MKEKGFLSD 463
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 127/564 (22%), Positives = 244/564 (43%), Gaps = 70/564 (12%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A+ +++E + +P++ T +I L ++ + D V + E + +P + +
Sbjct: 255 DMAWKFFHEIEA-NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 158 LVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMK--- 213
++ A KF A +LL+ G I +++A+N + K+ + V+E+MK
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA 373
Query: 214 -----SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----------CKSRKLDST-- 255
+ I++D C ++ +++ DS + A LF CKS+KLD
Sbjct: 374 APNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 256 PFSTHMYKI----------LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
F YK+ L D LGK GR +A K + M + + +Y SLI +F
Sbjct: 434 IFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ + +++K+ + D ++ + + G EK + E +K+ + + D
Sbjct: 494 NHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRF-VPDA 552
Query: 366 ISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
S +I ++G K +++ + QGC+ Y +I+ +C+ +KA ++ E
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 425 MQQKGFDKCVVA-----------------------------------YSSMVAMYGKTGR 449
M+ KGF+ VV YSS++ +GK GR
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
I +A ++ ++ KG PNV+ +NSL+D +A+ + + ++ M+ K TP++V+Y
Sbjct: 673 IDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+I+ + R+F+ F+ E + G M+ +K I E L K+ G
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 570 TKLDERLYHSAMNALRDAGLQMQA 593
D Y++ + L + M A
Sbjct: 793 GVPDSACYNAMIEGLSNGNRAMDA 816
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 114/504 (22%), Positives = 204/504 (40%), Gaps = 93/504 (18%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
+ ++P ++ L + K + E A + E KK + P ST +LI L ++ K
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDE-ALRVFEEMKK--DAAPNLSTYNILIDMLCRAGKL 393
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF----ITDGEIALLAF 189
D L + + + P+ T + +V +++K A + + T EI +
Sbjct: 394 DCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSL 453
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI---------------------- 227
+G ++ Y +YEKM + +S Y +
Sbjct: 454 IDGLGKVGRVDDAYK---IYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVN 510
Query: 228 -------------MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGR 274
M+ +K G+ EK A+F E KSR+ P Y IL L K+G
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRF--VP-DARSYSILIHGLIKAGF 567
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
A E + F MKE+G + D Y +I F +V A +L +E + KG +P V
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF--EPTV--- 622
Query: 335 LVLMYIEEGL-----VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
+ + +GL +++ + E K+ +++++ I ++++GF K A + E+
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 390 LISQG-----------------------------------CIPGQVTYASIINAYCRIAL 414
L+ +G C P QVTY +IN C++
Sbjct: 683 LMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
++KA + EMQ++G ++Y++M++ K G I +A L + KA G P+ YN+
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802
Query: 475 LMDMHGRAKNLRQVEKLWKEMERR 498
+++ L++E RR
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETRRR 826
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/504 (19%), Positives = 216/504 (42%), Gaps = 40/504 (7%)
Query: 86 FLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKI 145
F+ G+L+ + A +Y+ ++ E + L+ + + + +D++ + + +
Sbjct: 67 FVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSV 126
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-DGEIALLAFNSAMGGYNKLHMYYS 204
P +TC +V SCV+A K + ++Q A A+ + +G ++ ++
Sbjct: 127 AGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDM 186
Query: 205 TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKI 264
+ ++++M+ G + ++ + K G + +L E KS LD+ +Y +
Sbjct: 187 MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDA---DIVLYNV 243
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
DS GK G+ A KFF +++ G+ D Y S+I + A E+F+ E
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE--- 300
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
KN ++ + + I+ G+ + A
Sbjct: 301 -------------------------------KNRRVPCTYAYNTMIM-GYGSAGKFDEAY 328
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+ E+ ++G IP + Y I+ ++ +A +VF EM++ + Y+ ++ M
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPN-LSTYNILIDML 387
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ G++ A L M+ G PNV N ++D +++ L + ++++M+ + TPD+
Sbjct: 388 CRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDE 447
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+++ ++I + D K Y + + + + ++ F + E+ K+ +D
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 565 MKSEGTKLDERLYHSAMNALRDAG 588
M ++ D +L ++ M+ + AG
Sbjct: 508 MVNQNCSPDLQLLNTYMDCMFKAG 531
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 180/394 (45%), Gaps = 4/394 (1%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
LL+R VQ++K K + + C+ L+ V+ +A + Q +
Sbjct: 293 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 352
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G ++ + N + K +T M+ G+ D Y ++ AY + G E+
Sbjct: 353 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 412
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
L + L F+ Y + + L K+G+ A +M + G+ D + Y L
Sbjct: 413 FELMDSMSGKGLKPCVFT---YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 469
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ + AE +F E +G++ D L+ + + G +++ L MKNA L
Sbjct: 470 LVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGL 529
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ I ++ GF + A+KV ++++ QGC VTY +I+N C+ + S+A++
Sbjct: 530 APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADE 589
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+F EM ++G +++++ Y K G + A+ L M + +P+V YN+L+D
Sbjct: 590 LFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFC 649
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ + +V +LW +M R++ P+ +SY +I+ Y
Sbjct: 650 KGSEMEKVNELWNDMISRRIYPNHISYGILINGY 683
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 207/471 (43%), Gaps = 45/471 (9%)
Query: 84 DSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDF 143
+S L G++K +LA++ Y E + + TL ++I L +++K ++ S D
Sbjct: 327 NSLLGGLVKVGWV-DLAWEIYQEVVR-SGVQVNVYTLNIMINALCKNQKIENTKSFLSDM 384
Query: 144 KIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMY 202
+ V PD T + L+ + R + A L+ G + + +N+ + G K Y
Sbjct: 385 EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 444
Query: 203 YSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFSTH 260
V ++M G+ D+ Y ++ + + +F E S+ + D FS
Sbjct: 445 LRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA- 503
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI------------------- 301
L L K+G +ALK+FRDMK G+ D IY LI
Sbjct: 504 ----LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM 559
Query: 302 ----CSFASITEVKL------------AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
C +T + A+ELF E E+G+ D L+ Y ++G +
Sbjct: 560 LEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNM 619
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
K + + E M LK +++GF K +++ +IS+ P ++Y +
Sbjct: 620 NKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGIL 679
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
IN YC + S+A +++ EM +KGF+ ++ +++V Y + G A ++ M KG
Sbjct: 680 INGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 739
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
P+ YN+L++ + +N+ + L +ME + PD ++Y +++ ++R
Sbjct: 740 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 790
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%)
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+P ++ L+ ++ +++ E F+ + KG+ C L+ ++ G V+ ++
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ + + ++++ ++N K + + +G P VTY ++INAYCR
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 406
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
L +A ++ M KG CV Y++++ KTG+ A ++ +M G P+ Y
Sbjct: 407 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 466
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N L+ R N+ E+++ EM + V PD VS++ +I ++ D +K++ + +
Sbjct: 467 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 526
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G D I I++G F + + E +K+ +M +G LD Y++ +N L
Sbjct: 527 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGL 578
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 82/190 (43%), Gaps = 17/190 (8%)
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK-----------------GCEPNVWIY 472
F + ++S+M+ + ++ R+ DA ++ +M K C N ++
Sbjct: 232 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 291
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+ L+ + +A+ LR+ + ++ ++ + + + +++ + D+ + Y E
Sbjct: 292 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVR 351
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
+G ++ IM+ K +IE L DM+ +G D Y++ +NA GL +
Sbjct: 352 SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEE 411
Query: 593 AQWLQQNFEG 602
A L + G
Sbjct: 412 AFELMDSMSG 421
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/503 (21%), Positives = 216/503 (42%), Gaps = 64/503 (12%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P T LLI + + L ++ + N++P A + ++ + +AN
Sbjct: 112 KPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANK 171
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
LL+ G + ++ +++ + GY + + M +G+ D CY I+
Sbjct: 172 LLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 231
Query: 233 KIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K G E+ + LE + R L D+ F + K+G+ EA K+F +M + G+
Sbjct: 232 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL-----GYSKTGKMTEAAKYFDEMLDHGL 286
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
+ + +Y LI + A +F+ G+L D + C + ++ G V++ L
Sbjct: 287 MPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 346
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
V +K L ++++GF K+ A ++++++ +G P Y ++++ C
Sbjct: 347 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 406
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ +A K+F M +KG + V YS+M+ Y K+ + +A L +M +KG +P+ +
Sbjct: 407 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 466
Query: 471 IYNSLMDMHG--------RAKNL----------------------------RQVEKLWKE 494
+YN+L+ HG +A NL ++ +L++E
Sbjct: 467 VYNALV--HGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQE 524
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M +++ PD V+YTTVI + +A + + + E + ++D A
Sbjct: 525 MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFA------------ 572
Query: 555 IEELVKLLQDMKSEGTKLDERLY 577
L + M ++G K DE Y
Sbjct: 573 ------LFEKMVAKGVKPDEVTY 589
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 132/565 (23%), Positives = 249/565 (44%), Gaps = 45/565 (7%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE------FRPEKS 118
+EL + + VP A + + ++G+ ++L+ A KL E +P
Sbjct: 135 LELLDEMEKRNLVPSAVSYGAMINGLC---HCKDLSL-----ANKLLEKMTFSGLKPNVV 186
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCV-RARKFKIANT-LLQ 176
LI + + L + V PD C + SC+ +A K + A+T LL+
Sbjct: 187 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIF-CYNAIISCLSKAGKMEEASTYLLE 245
Query: 177 VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
+ + + F + + GY+K +++M G++ ++ Y ++ ++K G+
Sbjct: 246 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 305
Query: 237 SEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
+ ++F + + D S ++ +L K+GR EALK F ++KEKG++ D
Sbjct: 306 LMEALSIFRHLHALGVLPDVQTCSAFIHGLL-----KNGRVQEALKVFSELKEKGLVPDV 360
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
Y+SLI F EV+ A EL E KG+ + + LV + G +++ + +
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 420
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
M L+ +++G+ K A ++ ++ S+G P Y ++++ C+
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 480
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
KA +F EM QKGF +++++++ Y K+ +I++A L +M AK P+ Y +
Sbjct: 481 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 539
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRK-----------------VTPDKVSYTTVISAYNRA 517
++D H +A + + L+KEM+ R V PD+V+Y VI A+ +
Sbjct: 540 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKE 599
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
K +E G + I +++ K + E KLL +M G K
Sbjct: 600 DNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 659
Query: 578 HSAMNALRDAGLQMQAQWLQQNFEG 602
+ + + +AG +A + FEG
Sbjct: 660 STLVRSFHEAGKMDEATRV---FEG 681
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/488 (20%), Positives = 201/488 (41%), Gaps = 33/488 (6%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T ++ L ++K+ + E+ + + PD + CS L+ +R +
Sbjct: 8 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 67
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
V ++ G I L+ +N + G K + + M + G +S +C ++E Y +
Sbjct: 68 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 127
Query: 234 IGDSEKVAALFLECKSRKLDSTPFS--------------------------------THM 261
+ + L E + R L + S +
Sbjct: 128 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 187
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L GR EA + M G+ D Y ++I + +++ A E +
Sbjct: 188 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 247
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+G+ D +L Y + G + + + M + L ++ + ++NG K
Sbjct: 248 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 307
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+ ++ L + G +P T ++ I+ + +A KVF E+++KG V YSS++
Sbjct: 308 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 367
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ + K G + A L +M KG PN++IYN+L+D ++ ++++ KL+ M + +
Sbjct: 368 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 427
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD V+Y+T+I Y ++ ++E G + +V K +E+ + L
Sbjct: 428 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 487
Query: 562 LQDMKSEG 569
++M +G
Sbjct: 488 FREMLQKG 495
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 196/478 (41%), Gaps = 57/478 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PDA F +F+ G K + E A Y++E P +LI ++ +
Sbjct: 253 PDAVTFGAFILGYSKTGKMTE-AAKYFDEMLD-HGLMPNNPLYTVLINGHFKAGNLMEAL 310
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
S+ VLPD TCS + ++ + + A
Sbjct: 311 SIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEA-------------------------- 344
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
+ V+ ++K G+V D Y ++ + K G+ EK L E + + F
Sbjct: 345 --------LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 396
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+Y L D L KSG A K F M EKG+ D Y+++I + V A LF
Sbjct: 397 ---IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 453
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E KG+ V LV +EG +EK +++ M + + +++G+ K
Sbjct: 454 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN-TLIDGYCKS 512
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG-------- 429
A ++++++I++ +P VTY ++I+ +C+ +A +F EMQ++
Sbjct: 513 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFA 572
Query: 430 -FDKCV--------VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
F+K V V Y ++ + K + +A L ++ KG I++ L+
Sbjct: 573 LFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALC 632
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ ++L + KL EM + P + +T++ +++ A + D + + + G V D
Sbjct: 633 KREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 690
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 140/312 (44%), Gaps = 6/312 (1%)
Query: 285 MKEKGILEDPSIYASL---ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
M EKG++ + Y + +C + E KL F+E ++ G+ D C L+ ++
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLT---FEEMQKTGLKPDYNACSALIDGFMR 57
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
EG +++ L + + M + + I+ +++G K A ++ + +I+ GC P T
Sbjct: 58 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT 117
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ +I YCR +A ++ EM+++ V+Y +M+ + A L+ KM
Sbjct: 118 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 177
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
G +PNV +Y++L+ + + + +L M V PD Y +IS ++A + +
Sbjct: 178 FSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKME 237
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ E + G D G + +SK ++ E K +M G + LY +
Sbjct: 238 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 297
Query: 582 NALRDAGLQMQA 593
N AG M+A
Sbjct: 298 NGHFKAGNLMEA 309
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 156/348 (44%), Gaps = 24/348 (6%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+T+ Y I+ L ++ R EA F +M++ G+ D + ++LI F
Sbjct: 9 NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGF------------M 56
Query: 318 KEAEEKGMLRDPEVCLK------------LVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+E + +LR +V + L+ + G +EK ++++ M K +
Sbjct: 57 REGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSR 116
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
C ++ G+ + A+++ +++ + +P V+Y ++IN C S A K+ +M
Sbjct: 117 TFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM 176
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
G VV YS+++ Y GRI +A L+ M G P+++ YN+++ +A +
Sbjct: 177 TFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM 236
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ E++ R + PD V++ I Y++ + K+++E +G + + + ++
Sbjct: 237 EEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVL 296
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ K + E + + + + + G D + + ++ L G +A
Sbjct: 297 INGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEA 344
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/479 (21%), Positives = 192/479 (40%), Gaps = 76/479 (15%)
Query: 44 NP--SSIINHRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAY 101
NP + +IN F A + + R H +PD + +F+HG+LK+ + QE A
Sbjct: 290 NPLYTVLINGHF---KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQE-AL 345
Query: 102 DYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS 161
++E K+ P+ T LI + + + L ++ + + P+ + LV
Sbjct: 346 KVFSELKE-KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDG 404
Query: 162 CVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD 220
++ + A L G E + +++ + GY K ++ +M S G+
Sbjct: 405 LCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 464
Query: 221 SGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM-YKILCDSLGKSGRAFEAL 279
S Y ++ K GD EK LF R++ F+T + + L D KS + EA
Sbjct: 465 SFVYNALVHGCCKEGDMEKAMNLF-----REMLQKGFATTLSFNTLIDGYCKSCKIQEAS 519
Query: 280 KFFRDMKEKGILEDPSIYASLI---CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+ F++M K I+ D Y ++I C + E L LFKE +
Sbjct: 520 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL---LFKEMQ--------------- 561
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
E L+ T+ ++E+++++G
Sbjct: 562 ----ERNLIVDTV----------------------------------FALFEKMVAKGVK 583
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P +VTY +I A+C+ +A K+ E+ KG + ++ K + +A L
Sbjct: 584 PDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 643
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
+ +M G +P++ ++L+ A + + ++++ ++ + PD TT+I N
Sbjct: 644 LDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT---TTLIDLVN 699
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 104/251 (41%), Gaps = 44/251 (17%)
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG----FDKC--------------- 433
+G +P TY I CR ++A+ F EMQ+ G ++ C
Sbjct: 4 KGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE 63
Query: 434 ----------------VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
++ Y+ ++ K G++ A ++ M GC+PN + L++
Sbjct: 64 VLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIE 123
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ R N+ + +L EME+R + P VSY +I+ ++ + K + +G
Sbjct: 124 GYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 183
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG--------- 588
+ + ++ ++ +IEE +LL M G D Y++ ++ L AG
Sbjct: 184 NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 243
Query: 589 LQMQAQWLQQN 599
L++Q + L+ +
Sbjct: 244 LEIQGRGLKPD 254
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 137/352 (38%), Gaps = 41/352 (11%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKS------T 119
EL+ + + P+ +++ + G+ K Q A+KL + PEK T
Sbjct: 381 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR--------ARKLFDGMPEKGLEPDSVT 432
Query: 120 LKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
+I +S+ SL + V P + + LV C + + A L + +
Sbjct: 433 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 492
Query: 180 TDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
G L+FN+ + GY K ++++M + I+ D Y +++ + K G E+
Sbjct: 493 QKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEE 552
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
LF E + R L + D++ F M KG+ D Y
Sbjct: 553 ANLLFKEMQERNL------------IVDTV---------FALFEKMVAKGVKPDEVTYGL 591
Query: 300 LICSFASITEVKLAE--ELFKEAEEKGMLRDPEVC-LKLVLMYIEEGLVEKTLDVVESMK 356
+I +A E L E +L E KGML + L + + E L E + +++ M
Sbjct: 592 VI--YAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS-KLLDEMG 648
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
LK S +V F + A +V+E + S G +P T ++N
Sbjct: 649 ELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 196/430 (45%), Gaps = 39/430 (9%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
+L +++ L + + + L ++F + + P+A+T + ++ + V+ R F +L+V
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKV- 284
Query: 179 ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE 238
MK G+V + Y +ME K G
Sbjct: 285 ---------------------------------MKKDGVVYNKVTYTLLMELSVKNGKMS 311
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
LF E + R ++S H+Y L + G A F ++ EKG+ Y
Sbjct: 312 DAEKLFDEMRERGIES---DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYG 368
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
+LI + E+ AE L E + KG+ V L+ Y +G+V++ + + M+
Sbjct: 369 ALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQK 428
Query: 359 KLKISDCISC-AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ +D +C I + F++ + Y A + +++ G V+Y ++I+ YC+ +
Sbjct: 429 GFQ-ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEE 487
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A+++F+EM KG + Y+ M+ Y K G+I++A L A M+A G +P+ + Y SL+
Sbjct: 488 AKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIH 547
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
A N+ + +L+ EM + + + V+YT +IS ++A + D Y+E + G I
Sbjct: 548 GECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTI 607
Query: 538 DRAIAGIMVG 547
D + ++G
Sbjct: 608 DNKVYTALIG 617
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 174/369 (47%), Gaps = 3/369 (0%)
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
GI ++ Y I+ AY K D V + K K D ++ Y +L + K+G+
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVL---KVMKKDGVVYNKVTYTLLMELSVKNGKM 310
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
+A K F +M+E+GI D +Y SLI +K A LF E EKG+ L
Sbjct: 311 SDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGAL 370
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ + G + ++ M++ + I+ + +++G+ ++ A +Y+ + +G
Sbjct: 371 IDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGF 430
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
T +I + + R+ Y +A++ M + G V+Y++++ +Y K G + +A
Sbjct: 431 QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKR 490
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L +M +KG +PN YN ++ + + +++ KL ME + PD +YT++I
Sbjct: 491 LFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGEC 550
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
A D ++ ++E + G + +M+ SK + +E L +MK +G +D +
Sbjct: 551 IADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNK 610
Query: 576 LYHSAMNAL 584
+Y + + ++
Sbjct: 611 VYTALIGSM 619
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/385 (19%), Positives = 169/385 (43%), Gaps = 7/385 (1%)
Query: 201 MYYSTILVYEKMKSAGIVLDS-GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS-TPFS 258
M+ + V++ M G+ +D C ++ A + L LE R +DS +
Sbjct: 169 MFEEGLRVFDYMVKKGLSIDERSCIVFLVAA-----KKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
+ I+ + L + G ++ K ++ KGI + Y ++I ++ + E + K
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
++ G++ + L+ + ++ G + + + M+ ++ + ++++ ++
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A ++++L +G P TY ++I+ C++ AE + EMQ KG + V ++
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 403
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ Y + G + +A + M+ KG + +V+ N++ R K + ++ M
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG 463
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
V VSYT +I Y + + + + E G + +M+ + K +I+E
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNA 583
KL +M++ G D Y S ++
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLIHG 548
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 136/320 (42%)
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
E L+ F M +KG+ D + + + L E+F+ + G+ +V
Sbjct: 172 EGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVV 231
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
G VEK+ +++ +K I+N + K+R + V + + G +
Sbjct: 232 EGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVV 291
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
+VTY ++ + S AEK+F EM+++G + V Y+S+++ + G ++ A L
Sbjct: 292 YNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLL 351
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
++ KG P+ + Y +L+D + + E L EM+ + V +V + T+I Y R
Sbjct: 352 FDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCR 411
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
D Y+ G D + F++L + +E + L M G KL
Sbjct: 412 KGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVS 471
Query: 577 YHSAMNALRDAGLQMQAQWL 596
Y + ++ G +A+ L
Sbjct: 472 YTNLIDVYCKEGNVEEAKRL 491
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 108/259 (41%)
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
+Y++ G+ E+ L V + M L I + + KRR ++++ +++ G
Sbjct: 163 VYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKI 222
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
+ ++ CR K++K+ E KG Y++++ Y K ++
Sbjct: 223 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVL 282
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
MK G N Y LM++ + + EKL+ EM R + D YT++IS R
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
++E G G ++ K+ ++ L+ +M+S+G + + ++
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 578 HSAMNALRDAGLQMQAQWL 596
++ ++ G+ +A +
Sbjct: 403 NTLIDGYCRKGMVDEASMI 421
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
M++ G+ DS Y ++ + ++ LF E + LD + Y ++ L K
Sbjct: 530 MEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT---YTVMISGLSK 586
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+G++ EA + +MK KG D +Y +LI S S
Sbjct: 587 AGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMHS 621
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 188/406 (46%), Gaps = 18/406 (4%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ +++ + Y KL S I ++++MK + Y ++ Y+K+G EK LF E
Sbjct: 234 ITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEE 293
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
K T ++ Y L LGK+GR EA F++DM G+ D +L+
Sbjct: 294 MKRAGCSPTVYT---YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVE------SMKNA 358
+ V EEL E GM R C V+ Y + + L E V E MK
Sbjct: 351 VGRV---EELTNVFSEMGMWR----CTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD 403
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+ S+ +++G+ K A+ + E++ +G P Y S+INA + Y A
Sbjct: 404 SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAA 463
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+++F E+++ + Y+ M+ +GK G++ +A+ L +MK +G P+V+ YN+LM
Sbjct: 464 DELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSG 523
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+A + + L ++ME D S+ +++ + R ++ + + +G D
Sbjct: 524 MVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPD 583
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++G F+ EE +++++MK +G + D Y S ++A+
Sbjct: 584 GVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 171/365 (46%), Gaps = 5/365 (1%)
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG-ILEDPSIY 297
K ++F + K RK T ST+ IL L + G+ + + + +M +G D Y
Sbjct: 180 KALSVFYQAKGRKCKPTS-STYNSVILM--LMQEGQHEKVHEVYTEMCNEGDCFPDTITY 236
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++LI S+ + A LF E ++ M ++ L+ +Y + G VEK LD+ E MK
Sbjct: 237 SALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR 296
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
A + ++ G K A Y+ ++ G P V +++N ++ +
Sbjct: 297 AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEE 356
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
VF EM VV+Y++++ A++ + + KMKA P+ + Y+ L+
Sbjct: 357 LTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILI 416
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D + + + + L +EM+ + P +Y ++I+A +A+ ++ + + E + N G
Sbjct: 417 DGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGN 476
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + +M+ F K ++ E V L +MK++G+ D Y++ M+ + AG+ +A L
Sbjct: 477 VSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSL 536
Query: 597 QQNFE 601
+ E
Sbjct: 537 LRKME 541
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 156/369 (42%), Gaps = 5/369 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P + L+ + K + + L E+ K P +T + L+ +A + A
Sbjct: 265 QPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYG 324
Query: 174 LLQVFITDGEIALLAF-NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+ + DG + F N+ M K+ V+ +M Y +++A +
Sbjct: 325 FYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALF 384
Query: 233 KI-GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ +V++ F + K+ DS S Y IL D K+ R +AL +M EKG
Sbjct: 385 ESKAHVSEVSSWFDKMKA---DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFP 441
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
P+ Y SLI + + A+ELFKE +E V ++ + + G + + +D+
Sbjct: 442 PCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDL 501
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
MKN A+++G K A + ++ GC ++ I+N + R
Sbjct: 502 FNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFAR 561
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ +A ++F ++ G V Y++++ + G +A ++ +MK KG E +
Sbjct: 562 TGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAIT 621
Query: 472 YNSLMDMHG 480
Y+S++D G
Sbjct: 622 YSSILDAVG 630
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 156/357 (43%), Gaps = 6/357 (1%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
E A D + E K+ P T LI+ L ++ + D +D + PD +
Sbjct: 285 EKALDLFEEMKR-AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNN 343
Query: 158 LVASCVR-ARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILV-YEKMKSA 215
L+ + R ++ N ++ + ++++N+ + + + S + ++KMK+
Sbjct: 344 LMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD 403
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
+ Y +++ Y K EK L E + P + Y L ++LGK+ R
Sbjct: 404 SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA---YCSLINALGKAKRY 460
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
A + F+++KE +YA +I F ++ A +LF E + +G D L
Sbjct: 461 EAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ ++ G++ + ++ M+ + I+NGF++ A++++E + G
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI 580
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
P VTY +++ + ++ +A ++ EM+ KGF+ + YSS++ G +D
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/502 (21%), Positives = 221/502 (44%), Gaps = 33/502 (6%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T LI + + ++ +D K +PD T + L+ ++R+ K A +
Sbjct: 102 PDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEV 161
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ +G +++ +NS + Y + + + + +M GI LD Y ++ + +
Sbjct: 162 LREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVR 221
Query: 234 IGDSEKVAALFLE-----CKSR----------KLDSTPFSTHM----------------- 261
G E +F E CK + F+ M
Sbjct: 222 AGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVT 281
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ L G++G E F++MK G + + Y +LI +++ A +++K
Sbjct: 282 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRML 341
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E G+ D ++ GL E++ + MK+ + K ++ C++++ ++ +
Sbjct: 342 EAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIG 401
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+ + E++ S P V +++ + L +AE F+E+++KGF + ++M+
Sbjct: 402 RMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAML 461
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
++YG+ ++ M G P++ YNSLM MH R++N + E++ KE+ + +
Sbjct: 462 SIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIK 521
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD +SY TVI AY R + ++E R +G V D V ++ S E+ + +
Sbjct: 522 PDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDV 581
Query: 562 LQDMKSEGTKLDERLYHSAMNA 583
++ M G K ++ Y+S ++
Sbjct: 582 VRYMIKHGCKPNQNTYNSVVDG 603
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 162/343 (47%), Gaps = 1/343 (0%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI-TEVK 311
D + Y L + +GR EA+ F+ M+E+G Y ++ + +
Sbjct: 27 DGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWN 86
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
+ LF+ + G+L D L+ L E+ V + MK+ A++
Sbjct: 87 KIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALL 146
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ + K R A++V ++ GC P VTY S+I+AY R L +A ++ +M + G +
Sbjct: 147 DVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGIN 206
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
V Y+++++ + + G+ AM + A+M+A GC+PN+ +N+L+ MHG ++ K+
Sbjct: 207 LDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKV 266
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
++E++ PD V++ T+++ + + + E + G V +R ++ +S+
Sbjct: 267 FEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSR 326
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
++ + + + M G D Y++ + AL GL Q++
Sbjct: 327 CGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSE 369
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 171/371 (46%), Gaps = 8/371 (2%)
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
G LD Y ++ A G + +F + + T + Y ++ + GK G
Sbjct: 28 GFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLIT---YNVILNVYGKMGMP 84
Query: 276 FEALK-FFRDMKEKGILEDPSIYASLI--CSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
+ +K F MK G+L D Y +LI C S+ E A +FK+ + G + D
Sbjct: 85 WNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAA--VFKDMKSMGFVPDKVTY 142
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
L+ +Y + ++ ++V+ M+ S ++++ +++ A+++ Q++
Sbjct: 143 NALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVE 202
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
G TY ++++ + R A +VF EM+ G + +++++ M+G G+ +
Sbjct: 203 GGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAE 262
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
M + ++K C P++ +N+L+ + G+ +V ++KEM+R P++ +Y T+IS
Sbjct: 263 MMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLIS 322
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
AY+R FD + Y G D + ++ ++ E+ K+ +MK K
Sbjct: 323 AYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKP 382
Query: 573 DERLYHSAMNA 583
+E Y S ++A
Sbjct: 383 NELTYCSLLHA 393
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 143/305 (46%), Gaps = 36/305 (11%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
++ LGK G+ A D+ + G D Y SLI + S + A +FK+ EE+
Sbjct: 3 VIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G C ++ Y I+N + K W
Sbjct: 63 G-------CKPTLITY----------------------------NVILNVYGKMGMPWNK 87
Query: 384 VK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
+K ++E + + G +P + TY ++I R +L+ +A VF +M+ GF V Y++++
Sbjct: 88 IKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLD 147
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+YGK+ R ++AM ++ +M+ GC P++ YNSL+ + R L++ +L +M +
Sbjct: 148 VYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINL 207
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D +YTT++S + RA + + ++ + E R G + ++ + + E++K+
Sbjct: 208 DVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVF 267
Query: 563 QDMKS 567
+++K+
Sbjct: 268 EEIKN 272
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 164/367 (44%), Gaps = 5/367 (1%)
Query: 167 KFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
K +A +LL DG + + A+ S + Y ++V++KM+ G Y
Sbjct: 13 KVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYN 72
Query: 226 QIMEAYYKIGDS-EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
I+ Y K+G K+ LF K+ + ++ Y L + EA F+D
Sbjct: 73 VILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYT---YNTLITCCRRGSLHEEAAAVFKD 129
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
MK G + D Y +L+ + K A E+ +E E G L+ Y +GL
Sbjct: 130 MKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGL 189
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+++ +++ M + + +++GF + +A++V+ ++ + GC P T+ +
Sbjct: 190 LKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNA 249
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I + +++ KVF E++ +V +++++A++G+ G + + +MK G
Sbjct: 250 LIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 309
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
P YN+L+ + R + Q ++K M +TPD +Y V++A R ++
Sbjct: 310 FVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSE 369
Query: 525 KFYNEFR 531
K + E +
Sbjct: 370 KIFAEMK 376
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 184/421 (43%), Gaps = 53/421 (12%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P T LI+ K+ ++ + E+ K +PD T NT
Sbjct: 241 KPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTW----------------NT 284
Query: 174 LLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
LL VF +G +S + G V+++MK AG V + Y ++ AY +
Sbjct: 285 LLAVFGQNG------MDSEVSG------------VFKEMKRAGFVPERDTYNTLISAYSR 326
Query: 234 IGDSEKVAALFLECKSRKLDS--TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
G ++ ++ R L++ TP Y + +L + G ++ K F +MK+
Sbjct: 327 CGSFDQAMDIY----KRMLEAGITP-DLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCK 381
Query: 292 EDPSIYASLICSFASITEV----KLAEELFKEAEEKGMLRDPEVCLK-LVLMYIE-EGLV 345
+ Y SL+ ++A+ E+ LAEE+ G++ V LK LVL+ + + LV
Sbjct: 382 PNELTYCSLLHAYANGKEIGRMLALAEEICS-----GVIEPHAVLLKTLVLVNSKCDLLV 436
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
E + +E +K A+++ + +R+ + ++ + G P TY S+
Sbjct: 437 EAEVAFLE-LKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSL 495
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
+ + R + ++E+V E+ KG ++Y++++ Y + GR+++A + ++M+ G
Sbjct: 496 MYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGL 555
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
P+V YN+ + + + + M + P++ +Y +V+ Y + D +
Sbjct: 556 VPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIM 615
Query: 526 F 526
F
Sbjct: 616 F 616
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 104/202 (51%), Gaps = 2/202 (0%)
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
A II+ + S A + ++ + GF V AY+S++ GR R+A+ + KM+
Sbjct: 2 AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 463 KGCEPNVWIYNSLMDMHGR-AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
+GC+P + YN +++++G+ +++ L++ M+ V PD+ +Y T+I+ R +
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHE 121
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ + + G V D+ ++ V+ K + +E +++L++M+ G Y+S +
Sbjct: 122 EAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLI 181
Query: 582 NALRDAGLQMQAQWLQ-QNFEG 602
+A GL +A L+ Q EG
Sbjct: 182 SAYARDGLLKEAMELKNQMVEG 203
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 61/347 (17%), Positives = 138/347 (39%), Gaps = 4/347 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T L+ Q+ + + ++ K +P+ T + L+++ R F A +
Sbjct: 277 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDI 336
Query: 175 LQVFITDGEIALLA-FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + G L+ +N+ + + ++ + ++ +MK + YC ++ AY
Sbjct: 337 YKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYAN 396
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ ++ AL E S ++ P + + K L K EA F ++K KG D
Sbjct: 397 GKEIGRMLALAEEICSGVIE--PHAV-LLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPD 453
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
S +++ + E+ E G L+ M+ E++ +V++
Sbjct: 454 LSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLK 513
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+ +K ++ + + A +++ ++ G +P +TY + + +Y +
Sbjct: 514 EILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADS 573
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
++ A V M + G Y+S+V Y K DA+ ++ +
Sbjct: 574 MFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFISSL 620
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/519 (21%), Positives = 221/519 (42%), Gaps = 68/519 (13%)
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA-------------------NT 173
W+ I SL E K + PDA+T + L+ C R + A N
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 174 LLQVF----------------ITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
LL V+ + +G +++ +NS + Y + M + + +M G
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----CKSRKLDSTPFS---------THMY 262
D Y ++ + + G E ++F E CK F T M
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 263 KI------------------LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
KI L G++G E F++MK G + + + +LI ++
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ + A +++ + G+ D ++ G+ E++ V+ M++ + K ++
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
C++++ ++ + + E++ S P V +++ + L +AE+ F E
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
++++GF + +SMV++YG+ + A ++ MK +G P++ YNSLM MH R+ +
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+ E++ +E+ + + PD +SY TVI AY R + ++E R +G V D
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNT 739
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+G ++ S EE + +++ M G + ++ Y+S ++
Sbjct: 740 FIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 180/434 (41%), Gaps = 39/434 (8%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
LLAF +G + K + + K K +LD+ I+ K G A +F
Sbjct: 138 LLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMF- 196
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ D + Y L + SGR EA+ F+ M+E G Y ++ F
Sbjct: 197 --NGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFG 254
Query: 306 SI-TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ T L ++ + G+ D L+ L ++ V E MK A
Sbjct: 255 KMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDK 314
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
A+++ + K A+KV +++ G P VTY S+I+AY R + +A ++ +
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 374
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M +KG V Y+++++ + + G++ AM + +M+ GC+PN+ +N+ + M+G
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 485 LRQVEKLW-----------------------------------KEMERRKVTPDKVSYTT 509
++ K++ KEM+R P++ ++ T
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ISAY+R F+ + Y G D + ++ ++ E+ K+L +M+
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 570 TKLDERLYHSAMNA 583
K +E Y S ++A
Sbjct: 555 CKPNELTYCSLLHA 568
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 146/330 (44%), Gaps = 36/330 (10%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
I+ LGK GR A F ++E G D Y SLI +FA+ + A +FK+ EE
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G C ++ Y I+N F K W
Sbjct: 238 G-------CKPTLITY----------------------------NVILNVFGKMGTPWNK 262
Query: 384 V-KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
+ + E++ S G P TY ++I R +L+ +A +VF EM+ GF V Y++++
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+YGK+ R ++AM ++ +M G P++ YNSL+ + R L + +L +M + P
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D +YTT++S + RA + + + + E R G + + ++ + E++K+
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
++ G D +++ + G+ +
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 190/422 (45%), Gaps = 10/422 (2%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKF-KIAN 172
+P+ T L+ ++ K +S +S+ E+ + P+ T + + KF ++
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 173 TLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
++ + ++ +N+ + + + M V+++MK AG V + + ++ AY
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 233 KIGDSEKVAALFLECKSRKLDS--TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
+ G E+ ++ R LD+ TP Y + +L + G ++ K +M++
Sbjct: 501 RCGSFEQAMTVY----RRMLDAGVTP-DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK-LVLMYIEEGLVEKTL 349
+ Y SL+ ++A+ E+ L L +E G++ V LK LVL+ + L+ +
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYS-GVIEPRAVLLKTLVLVCSKCDLLPEAE 614
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+K ++V+ + +R+ A V + + +G P TY S++ +
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMH 674
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
R A + K+E++ E+ KG +++Y++++ Y + R+RDA + ++M+ G P+V
Sbjct: 675 SRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDV 734
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
YN+ + + + + + M + P++ +Y +++ Y + D F +
Sbjct: 735 ITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVED 794
Query: 530 FR 531
R
Sbjct: 795 LR 796
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 98/197 (49%), Gaps = 1/197 (0%)
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
A II+ + S A +F +Q+ GF V +Y+S+++ + +GR R+A+ + KM+
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 463 KGCEPNVWIYNSLMDMHGR-AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
GC+P + YN ++++ G+ ++ L ++M+ + PD +Y T+I+ R
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ + E + G D+ ++ V+ K + +E +K+L +M G Y+S +
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 582 NALRDAGLQMQAQWLQQ 598
+A G+ +A L+
Sbjct: 357 SAYARDGMLDEAMELKN 373
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/511 (21%), Positives = 224/511 (43%), Gaps = 33/511 (6%)
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
E K P++ T LI + ++ ++ ED K +PD T + L+ ++
Sbjct: 93 EGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKS 152
Query: 166 RKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
R+ K A +L+ +G +++ +NS + Y + + + + +M GI LD Y
Sbjct: 153 RRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTY 212
Query: 225 CQIMEAYYKIGDSEKVAALFLE-----CKSR----------KLDSTPFSTHM-------- 261
++ + + G E +F E CK + F+ M
Sbjct: 213 TAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKI 272
Query: 262 ---------YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
+ L G++G E F++MK G + + Y +LI +++
Sbjct: 273 CCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQ 332
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A ++K + G+ D ++ GL E++ ++ M++ K ++ C++++
Sbjct: 333 AMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLH 392
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
++ + + + E++ S P V +++ + L +AE+ F+E+++KGF
Sbjct: 393 AYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSP 452
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+ ++M+A+YG+ + ++ MK G P++ YNSLM MH +++N + E++
Sbjct: 453 DLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVL 512
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
KE+ + + PD +SY TVI AY R ++E R +G + D V ++
Sbjct: 513 KEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAAD 572
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
S EE + ++ M G K ++ Y+S ++
Sbjct: 573 SMFEEAIDVVCYMIKHGCKPNQNTYNSVIDG 603
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 161/344 (46%), Gaps = 17/344 (4%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS---------IYASLICSFASITEV 310
+ Y L + +GR EA+ F+ M+E+G P+ +Y + + IT
Sbjct: 34 YAYTSLITACVSNGRYREAVMVFKKMEEEGC--KPTLITYNVILNVYGKMGMPWNKIT-- 89
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
LF+ + G+L D L+ L E+ V E MK+ +
Sbjct: 90 ----GLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTL 145
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++ + K R A++V ++ GC P VTY S+I+AY R L +A ++ +M ++G
Sbjct: 146 LDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGI 205
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
V Y++M++ + +TG+ AM + +M+ GC+PN+ +N+L+ MHG ++ K
Sbjct: 206 KLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMK 265
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
+++E++ PD V++ T+++ + + + E + G V +R ++ +S
Sbjct: 266 VFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYS 325
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ ++ + + + M G D Y++ + AL GL Q++
Sbjct: 326 RCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSE 369
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 141/304 (46%), Gaps = 36/304 (11%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
++ + LGK G+ A ++ + G D Y SLI + S + A +FK+ EE+
Sbjct: 3 VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G C ++ Y I+N + K W
Sbjct: 63 G-------CKPTLITY----------------------------NVILNVYGKMGMPWNK 87
Query: 384 VK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
+ ++E + + G +P + TY ++I R +LY +A VF +M+ GF V Y++++
Sbjct: 88 ITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLD 147
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+YGK+ RI++A+ ++ +M+ GC P++ YNSL+ + R L + +L +M R +
Sbjct: 148 VYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKL 207
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D +YT ++S + R + + ++ + E R G + ++ + + E++K+
Sbjct: 208 DVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVF 267
Query: 563 QDMK 566
+++K
Sbjct: 268 EEIK 271
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 101/525 (19%), Positives = 224/525 (42%), Gaps = 29/525 (5%)
Query: 72 HHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE--FRPEKSTLKLLIR-YLV 128
H PD + S + + + + +E + KK+ E +P T +++ Y
Sbjct: 25 HKDGFEPDVYAYTSLITACVSNGRYREAVMVF----KKMEEEGCKPTLITYNVILNVYGK 80
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LL 187
W+ I L E K +LPD +T + L+ C R ++ A + + + G + +
Sbjct: 81 MGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKV 140
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+N+ + Y K I V +M+ G Y ++ AY + G E+ L +
Sbjct: 141 TYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQM 200
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
R + F+ Y + ++G+ A++ F +M+ G + IC+F ++
Sbjct: 201 VERGIKLDVFT---YTAMLSGFVRTGKDESAMRVFEEMRTAGCKPN-------ICTFNAL 250
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCL---------KLVLMYIEEGLVEKTLDVVESMKNA 358
+K+ K AE + + ++C L+ ++ + G+ + V + MK
Sbjct: 251 --IKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRV 308
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+++ +S+ + A+ +Y++++ G P TY +++ A R L+ ++
Sbjct: 309 GFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQS 368
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
EK+ EMQ + + S++ Y I + L ++ + EP+ + +L+ +
Sbjct: 369 EKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLV 428
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ + L + E+ + E++R+ +PD + +I+ Y R + + N + +G
Sbjct: 429 NSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPS 488
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
A ++ + S+ E ++L+++ ++G K D Y++ + A
Sbjct: 489 LATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFA 533
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 102/197 (51%), Gaps = 1/197 (0%)
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
A IIN + S A + + + GF+ V AY+S++ GR R+A+ + KM+
Sbjct: 2 AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 463 KGCEPNVWIYNSLMDMHGR-AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
+GC+P + YN +++++G+ ++ L++ M+ + PD+ +Y T+I+ R ++
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ + + G V D+ ++ V+ K +I+E +++L++M+ G Y+S +
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLI 181
Query: 582 NALRDAGLQMQAQWLQQ 598
+A GL +A L+
Sbjct: 182 SAYARDGLLEEAMELKN 198
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 185/426 (43%), Gaps = 63/426 (14%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P T LI+ K+ ++ + E+ KI +PD T NT
Sbjct: 241 KPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVT----------------WNT 284
Query: 174 LLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
LL VF +G +S + G V+++MK G V + Y ++ AY +
Sbjct: 285 LLAVFGQNG------MDSEVSG------------VFKEMKRVGFVPERDTYNTLISAYSR 326
Query: 234 IGDSEKVAALFLECKSRKLDS--TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
G ++ A++ R LD+ TP Y + +L + G ++ K +M++
Sbjct: 327 CGSFDQAMAMY----KRMLDTGITP-DLSTYNAVLAALARGGLWEQSEKILAEMQDGMCK 381
Query: 292 EDPSIYASLICSFASITEV----KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
+ + SL+ ++A+ E+ LAEE+ G++ V LK ++ LV
Sbjct: 382 PNELTHCSLLHAYANGKEIGRMLALAEEICS-----GVIEPHAVLLKTLV------LVNS 430
Query: 348 TLDVVESMKNAKLKI-----SDCISC--AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
D++ + A L++ S +S A++ + +R+ ++ + G P
Sbjct: 431 KCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLA 490
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TY S++ + + + ++E+V E+ KG +++Y++++ Y + GR+++A + ++M
Sbjct: 491 TYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEM 550
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ G P+V YN+ + + + + M + P++ +Y +VI Y +
Sbjct: 551 RESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRR 610
Query: 521 DMCVKF 526
D +KF
Sbjct: 611 DDAIKF 616
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 211/495 (42%), Gaps = 7/495 (1%)
Query: 108 KKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
++ +P ST+ L+ + + K +++SLS + + P+ +T L+ S
Sbjct: 50 NRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHL 109
Query: 166 RKFKIANTLLQVFITDGEIALLA-FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
+ A ++L + G A F + + G + +++KM G D Y
Sbjct: 110 NRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTY 169
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
++ K+G++ L + F+ Y + DSL K + EA F +
Sbjct: 170 GTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA---YNTIIDSLCKDRQVTEAFNLFSE 226
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M KGI D Y SLI + ++ E K L E + ++ D +V +EG
Sbjct: 227 MVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGK 286
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V + DVV+ M ++ + A+++G AVKV++ ++ +GC+P ++Y +
Sbjct: 287 VTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNT 346
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+IN YC+I KA +F EM ++ V YS+++ R++DA+ L +M A
Sbjct: 347 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACS 406
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
PN+ Y L+D + + L + L K +E + PD I RA E +
Sbjct: 407 QIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAAR 466
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA- 583
++ G D IM+ + ++E KL ++M G L+ +Y++
Sbjct: 467 DLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGF 526
Query: 584 LRDAGLQMQAQWLQQ 598
LR+ Q LQ+
Sbjct: 527 LRNNETSRAIQLLQE 541
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 174/361 (48%), Gaps = 5/361 (1%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+N+ + Y K + + + MK G+V + Y ++E K G V LF E
Sbjct: 242 TYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEM 301
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+ R ++S H+Y L + G A F ++ EKG+L Y +LI +
Sbjct: 302 RERGIES---DIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKV 358
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
E+ AE L E + KG+ V L+ Y +G++++ + + M+ + +D +
Sbjct: 359 GEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQ-ADVFT 417
Query: 368 C-AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
C I + F++ + Y A + +++ G V+Y ++I+ YC+ +A+++F+EM
Sbjct: 418 CNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMS 477
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
K + Y+ M+ Y K G++++A L A MKA G +P+ + Y SL+ A N+
Sbjct: 478 SKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVD 537
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ +L+ EM + + + V+YT +IS ++A + D Y+E + G ID + ++
Sbjct: 538 EAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALI 597
Query: 547 G 547
G
Sbjct: 598 G 598
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 174/369 (47%), Gaps = 3/369 (0%)
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
GI ++ Y I+ AY K D V + K K D ++ Y +L + K+G+
Sbjct: 235 GIKPEAYTYNTIINAYLKHRDFSGVEKIL---KVMKKDGVVYNKVTYTLLIELSVKNGKM 291
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
+ K F +M+E+GI D +Y SLI +K A LF E EKG+L L
Sbjct: 292 NDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGAL 351
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ + G + ++ M++ + I+ + ++NG+ ++ A +Y+ + +G
Sbjct: 352 IDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGF 411
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
T +I + + R+ Y +A++ M + G V+Y++++ +Y K G + +A
Sbjct: 412 QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKR 471
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L +M +K +PN YN ++ + + +++ KLW M+ + PD +YT++I
Sbjct: 472 LFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGEC 531
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
A D ++ ++E + G + +M+ SK + +E L ++K +G +D +
Sbjct: 532 IADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYTIDNK 591
Query: 576 LYHSAMNAL 584
+Y + + ++
Sbjct: 592 VYTALIGSM 600
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 134/320 (41%)
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
E L+ F M +KG+ D + + + L E F+ + G+ +V
Sbjct: 153 EGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKITVYSLTIVV 212
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
G VEK+ +++ +K I+N + K R + K+ + + G +
Sbjct: 213 EGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVV 272
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
+VTY +I + + EK+F EM+++G + + Y+S+++ + G I+ A L
Sbjct: 273 YNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLL 332
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
++ KG P+ Y +L+D + + E L EM+ + V +V + T+I+ Y R
Sbjct: 333 FDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCR 392
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
D Y+ G D + F++L + +E + L M G +L
Sbjct: 393 KGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVS 452
Query: 577 YHSAMNALRDAGLQMQAQWL 596
Y + ++ G +A+ L
Sbjct: 453 YTNLIDVYCKEGNVEEAKRL 472
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 127/284 (44%), Gaps = 5/284 (1%)
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+KG+ D C+ ++ + ++ L+ M ++ +KI+ +V G +R
Sbjct: 163 KKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKITVYSLTIVVEGLCRRGEVE 222
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+ K+ ++ +G P TY +IINAY + +S EK+ M++ G V Y+ ++
Sbjct: 223 KSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLI 282
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ K G++ D L +M+ +G E ++ +Y SL+ + R N+++ L+ E+ + +
Sbjct: 283 ELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLL 342
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P +Y +I + E NE + G I + + ++ + + I+E +
Sbjct: 343 PSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMI 402
Query: 562 LQDMKSEGTKLDE---RLYHSAMNALRDAGLQMQAQWLQQNFEG 602
M+ +G + D S N L+ QWL + EG
Sbjct: 403 YDVMEKKGFQADVFTCNTIASCFNRLKR--YDEAKQWLFRMMEG 444
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 109/259 (42%)
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
+Y++ G+ E+ L V + M L I + + KRR ++ + +++ G
Sbjct: 144 VYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKI 203
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
+ ++ CR K++K+ E KG Y++++ Y K ++
Sbjct: 204 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKIL 263
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
MK G N Y L+++ + + VEKL+ EM R + D YT++IS R
Sbjct: 264 KVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRK 323
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
++E G + G ++ K+ ++ L+ +M+S+G + + ++
Sbjct: 324 GNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 383
Query: 578 HSAMNALRDAGLQMQAQWL 596
++ +N G+ +A +
Sbjct: 384 NTLINGYCRKGMIDEASMI 402
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 98/280 (35%), Gaps = 74/280 (26%)
Query: 117 KSTLKLLIRYLVQSKKWDSIVSL---------SEDFKIY--------------------- 146
K T LLI V++ K + + L D +Y
Sbjct: 275 KVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFD 334
Query: 147 -----NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLH 200
+LP +HT L+ + + A L+ + G I + FN+ + GY +
Sbjct: 335 ELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKG 394
Query: 201 MYYSTILVYE-----------------------------------KMKSAGIVLDSGCYC 225
M ++Y+ +M G+ L + Y
Sbjct: 395 MIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYT 454
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+++ Y K G+ E+ LF+E S+++ + Y ++ + K G+ EA K + +M
Sbjct: 455 NLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAIT---YNVMIYAYCKQGKVKEARKLWANM 511
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
K G+ D Y SLI V A LF E KG+
Sbjct: 512 KANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 551
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++ MK+ G+ DS Y ++ + ++ LF E + LD + Y ++
Sbjct: 507 LWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT---YTVMIS 563
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
L K+G++ EA + ++K KG D +Y +LI S S
Sbjct: 564 GLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALIGSMHS 602
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 187/406 (46%), Gaps = 18/406 (4%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ +++ + Y KL S I ++++MK + Y ++ Y+K+G EK LF E
Sbjct: 234 ITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEE 293
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
K T ++ Y L LGK+GR EA F++DM G+ D +L+
Sbjct: 294 MKRAGCSPTVYT---YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVE------SMKNA 358
+ V EEL E GM R C V+ Y + + L E V E MK
Sbjct: 351 VGRV---EELTNVFSEMGMWR----CTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD 403
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+ S+ +++G+ K A+ + E++ +G P Y S+INA + Y A
Sbjct: 404 SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAA 463
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
++F E+++ + Y+ M+ +GK G++ +A+ L +MK +G P+V+ YN+LM
Sbjct: 464 NELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSG 523
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+A + + L ++ME D S+ +++ + R ++ + + +G D
Sbjct: 524 MVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPD 583
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++G F+ EE +++++MK +G + D Y S ++A+
Sbjct: 584 GVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 171/365 (46%), Gaps = 5/365 (1%)
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG-ILEDPSIY 297
K ++F + K RK T ST+ IL L + G+ + + + +M +G D Y
Sbjct: 180 KALSVFYQAKGRKCKPTS-STYNSVILM--LMQEGQHEKVHEVYTEMCNEGDCFPDTITY 236
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++LI S+ + A LF E ++ M ++ L+ +Y + G VEK LD+ E MK
Sbjct: 237 SALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR 296
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
A + ++ G K A Y+ ++ G P V +++N ++ +
Sbjct: 297 AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEE 356
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
VF EM VV+Y++++ A++ + + KMKA P+ + Y+ L+
Sbjct: 357 LTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILI 416
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D + + + + L +EM+ + P +Y ++I+A +A+ ++ + + E + N G
Sbjct: 417 DGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGN 476
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + +M+ F K ++ E V L +MK++G+ D Y++ M+ + AG+ +A L
Sbjct: 477 VSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSL 536
Query: 597 QQNFE 601
+ E
Sbjct: 537 LRKME 541
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 155/369 (42%), Gaps = 5/369 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P + L+ + K + + L E+ K P +T + L+ +A + A
Sbjct: 265 QPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYG 324
Query: 174 LLQVFITDGEIALLAF-NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+ + DG + F N+ M K+ V+ +M Y +++A +
Sbjct: 325 FYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALF 384
Query: 233 KI-GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ +V++ F + K+ DS S Y IL D K+ R +AL +M EKG
Sbjct: 385 ESKAHVSEVSSWFDKMKA---DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFP 441
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
P+ Y SLI + + A ELFKE +E V ++ + + G + + +D+
Sbjct: 442 PCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDL 501
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
MKN A+++G K A + ++ GC ++ I+N + R
Sbjct: 502 FNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFAR 561
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ +A ++F ++ G V Y++++ + G +A ++ +MK KG E +
Sbjct: 562 TGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAIT 621
Query: 472 YNSLMDMHG 480
Y+S++D G
Sbjct: 622 YSSILDAVG 630
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 156/357 (43%), Gaps = 6/357 (1%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
E A D + E K+ P T LI+ L ++ + D +D + PD +
Sbjct: 285 EKALDLFEEMKR-AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNN 343
Query: 158 LVASCVR-ARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILV-YEKMKSA 215
L+ + R ++ N ++ + ++++N+ + + + S + ++KMK+
Sbjct: 344 LMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD 403
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
+ Y +++ Y K EK L E + P + Y L ++LGK+ R
Sbjct: 404 SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA---YCSLINALGKAKRY 460
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
A + F+++KE +YA +I F ++ A +LF E + +G D L
Sbjct: 461 EAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ ++ G++ + ++ M+ + I+NGF++ A++++E + G
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI 580
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
P VTY +++ + ++ +A ++ EM+ KGF+ + YSS++ G +D
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 212/461 (45%), Gaps = 8/461 (1%)
Query: 121 KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
KLL + + + +++SLS+ ++ + PD +T S L+ ++ +A ++ I
Sbjct: 99 KLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIK 158
Query: 181 DG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
G + + FN+ + G K+ + + ++ +++G Y I+ KIG++
Sbjct: 159 LGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTA 218
Query: 240 VAALFLECKSRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
A LF +K++ ++ Y IL DSL K EAL F MK K I D Y
Sbjct: 219 AAGLF-----KKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTY 273
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
SLI + K A L E ++ + LV +EG V + V ++M
Sbjct: 274 NSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTE 333
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
++ +++ G+S R A K+++ +I++GC P +Y +I YC+ +
Sbjct: 334 MGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDE 393
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A+++F EM +G V Y++++ + GR+R+A L M + G P+++ Y+ L+D
Sbjct: 394 AKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLD 453
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ L + +L++ M+ + PD Y +I A + K ++E + G +
Sbjct: 454 GFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLP 513
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ I ++ K ++E ++ ++M+ +G DE Y+
Sbjct: 514 NVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYN 554
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 184/402 (45%), Gaps = 8/402 (1%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEK-MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
++ F + K+ YY ++ K M+ AG+ D +++ + + + ++F
Sbjct: 94 IIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVF 153
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
K KL P + + L + L K G+ +A++FF D + G Y ++I
Sbjct: 154 --SKMIKLGLQPDAV-TFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGL 210
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKI 362
I E A LFK+ EE G P V +L+ ++ LV + LD+ MK ++
Sbjct: 211 CKIGETTAAAGLFKKMEEAGC--QPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISP 268
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
+++ G R + A + ++ S +P T+ +++A C+ S+A+ VF
Sbjct: 269 DIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVF 328
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
M + G + VV YSS++ Y I +A L M KGC+P+ + YN L+ + +A
Sbjct: 329 KTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKA 388
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
K + + ++L+ EM + +TPD V+Y T+I + + NG + D
Sbjct: 389 KRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTY 448
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+++ F K + + +L + M+S K D +Y+ ++A+
Sbjct: 449 SMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAM 490
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 193/443 (43%), Gaps = 5/443 (1%)
Query: 95 QTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHT 154
Q +LA+ +++ KL +P+ T LI L + K+ V +DF+ P +T
Sbjct: 144 QRVDLAFSVFSKMIKLG-LQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYT 202
Query: 155 CSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMK 213
+ ++ + + A L + G + ++ +N + K + + ++ MK
Sbjct: 203 YTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMK 262
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
+ I D Y +++ ++ +AL E S + F+ + +L D++ K G
Sbjct: 263 AKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFT---FNVLVDAICKEG 319
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
+ EA F+ M E G+ D Y+SL+ ++ E+ A +LF KG D
Sbjct: 320 KVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYN 379
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ 393
L+ Y + +++ + M + L + +++G + A +++ + S
Sbjct: 380 ILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSN 439
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G +P TY+ +++ +C+ KA ++F MQ + Y+ ++ K G ++DA
Sbjct: 440 GNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDA 499
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
L +++ +G PNV IY ++++ + L + + ++ ME PD+ SY +I
Sbjct: 500 RKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRG 559
Query: 514 YNRAREFDMCVKFYNEFRMNGGV 536
+ + ++ + E R G V
Sbjct: 560 FLQYKDESRAAQLIGEMRDRGFV 582
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 155/336 (46%), Gaps = 1/336 (0%)
Query: 265 LCDSLGKSGRAFEA-LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
L ++ K G+ + A + + M+ G+ D + LI F+ + V LA +F + +
Sbjct: 100 LLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKL 159
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G+ D L+ + G + ++ + + + + + I+NG K AA
Sbjct: 160 GLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAA 219
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+++++ GC P VTY +I++ C+ L ++A +F M+ K + Y+S++
Sbjct: 220 AGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQG 279
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
R ++A L+ +M + PN++ +N L+D + + + + ++K M V PD
Sbjct: 280 LCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPD 339
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
V+Y++++ Y+ E K ++ G D I++ + K +I+E +L
Sbjct: 340 VVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFN 399
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
+M +G D Y++ ++ L G +AQ L +N
Sbjct: 400 EMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKN 435
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/506 (23%), Positives = 211/506 (41%), Gaps = 41/506 (8%)
Query: 109 KLPEFR--PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRAR 166
K+ +FR P+ + L+ L +S K +S +D + + P T + ++ R
Sbjct: 206 KMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREG 265
Query: 167 KFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
+ A +L + G ++ +NS + GY K+ M + V+E+MK AG D Y
Sbjct: 266 DLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYN 325
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
++ + K E++ F K + Y L D+ K+G EA KFF DM
Sbjct: 326 SLINCFCKF---ERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDM 382
Query: 286 KEKGILEDPSIYASLI---CSFASITE--------------------------------V 310
G+ + Y SLI C + E +
Sbjct: 383 IRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRM 442
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
+ AEELF + G + ++ L YI+ ++EK +D++E M LK +
Sbjct: 443 REAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTK 502
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+ G ++ ++ V +++ G Y ++I+AY ++ ++A + EMQ G
Sbjct: 503 IWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGI 562
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
VV Y ++ K G ++ A+ M G +PN+ IY +L+D + L + +
Sbjct: 563 KITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKN 622
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L+ EM + ++PDK+ YT++I + + N G +D ++ FS
Sbjct: 623 LFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFS 682
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERL 576
+ Q++ LL +M +G D+ L
Sbjct: 683 RYGQVQLAKSLLDEMLRKGIIPDQVL 708
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 153/336 (45%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S Y ++ L + G A F +MK KG+ D Y SLI + + + A +F
Sbjct: 250 SVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVF 309
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+E ++ G D L+ + + + + + + MK L+ + +++ F K
Sbjct: 310 EEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKA 369
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A K + +I G P + TY S+I+A C+I ++A K+ EMQQ G + +V Y
Sbjct: 370 GMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTY 429
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++++ + GR+R+A L + G N IY SL + +AK + + + +EM +
Sbjct: 430 TALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNK 489
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ + PD + Y T I R E + + E G + I ++ + K+ + E
Sbjct: 490 KNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTE 549
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
V LLQ+M+ G K+ Y ++ L GL QA
Sbjct: 550 AVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQA 585
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/489 (20%), Positives = 197/489 (40%), Gaps = 43/489 (8%)
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
E K RP+ T LI + VS+ E+ K PD T + L+ +
Sbjct: 275 EEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKF 334
Query: 166 RKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
+ A L G + ++ +++ + + K M + M G+ + Y
Sbjct: 335 ERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTY 394
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
+++A KIGD + L E + ++ + Y L D L + GR EA + F
Sbjct: 395 TSLIDANCKIGDLNEAFKLESEMQQAGVN---LNIVTYTALLDGLCEDGRMREAEELFGA 451
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK--------------GMLRDPE 330
+ + G + IY SL + ++ A ++ +E +K G+ R E
Sbjct: 452 LLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNE 511
Query: 331 V------------C---------LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
+ C L+ Y + G + +++++ M++ +KI+
Sbjct: 512 IEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGV 571
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++G K AV+ ++ + G P + Y ++I+ C+ +A+ +F EM KG
Sbjct: 572 LIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKG 631
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ Y+S++ K G +A+ L +M G E ++ Y SL+ R ++ +
Sbjct: 632 ISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAK 691
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG---GVIDRAIAGIMV 546
L EM R+ + PD+V ++ Y + + + +++ G G ID + +
Sbjct: 692 SLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSCLT 751
Query: 547 GVFSKLSQI 555
V +KL ++
Sbjct: 752 AV-TKLHKL 759
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 212/459 (46%), Gaps = 29/459 (6%)
Query: 130 SKKWDSIVSLSE----------DFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
+++W+ I+++ E D YN+L DA+ R ++ A +A +
Sbjct: 149 NRQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSE---AEAAYMALLEARCVP 205
Query: 180 TDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
T+ ALL A G +LH I +M+ GI + Y ++ K SEK
Sbjct: 206 TEDTYALLL--RAYCGSGQLHRAEGVI---SEMQRNGIPPTATVYNAYLDGLLKARCSEK 260
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
++ K + + +T Y ++ + GK+ + +L+ FR+MK G + Y +
Sbjct: 261 AVEVYQRMKKERCRT---NTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTA 317
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKN 357
L+ +FA + AEE+F+E ++ G +P+V LM Y GL + ++ M++
Sbjct: 318 LVNAFAREGLCEKAEEVFEEMQQAG--HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEH 375
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ +V+ F + + A +++L QG P ++ +++A+ R ++
Sbjct: 376 MGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVAR 435
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK----AKGCEPNVWIYN 473
E+V ++ + G A ++M+ YG+ GR+ D L A M+ A P+ YN
Sbjct: 436 CEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYN 495
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
L++ +GRA L ++E ++ + R + D V++T+ I AY R +E+ C++ + E
Sbjct: 496 VLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDA 555
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
G D A +++ S Q+E++ +++ M + L
Sbjct: 556 GCYPDAGTAKVLLAACSDERQVEQVTAIVRSMHKDAKTL 594
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 162/331 (48%), Gaps = 4/331 (1%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L D+ G+ + EA + + E + YA L+ ++ ++ AE + E +
Sbjct: 175 YNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQ 234
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
G+ V + ++ EK ++V + MK + + + ++N + K
Sbjct: 235 RNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQPM 294
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
++++V+ ++ S GC P TY +++NA+ R L KAE+VF EMQQ G + V AY++++
Sbjct: 295 SSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 354
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y + G + A + + M+ GCEP+ YN L+D GRA ++ E ++E++++ +
Sbjct: 355 EAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMR 414
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P S+ ++SA+ R+ C + + +G D M+ + + +++++ +L
Sbjct: 415 PTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERL 474
Query: 562 LQDM-KSEGTKL---DERLYHSAMNALRDAG 588
M + +G D Y+ +NA AG
Sbjct: 475 FAAMERGDGASAGAPDTSTYNVLVNAYGRAG 505
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 84/194 (43%), Gaps = 4/194 (2%)
Query: 405 IINAYCRIALYSKAEKVFIE----MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
I+N ++ L + E + +++ F ++ Y+ ++ YG+ ++ +A +
Sbjct: 139 IVNVAVQLRLNRQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMAL 198
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
C P Y L+ + + L + E + EM+R + P Y + +AR
Sbjct: 199 LEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCS 258
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ V+ Y + + +M+ V+ K +Q +++ ++MKS G K + Y +
Sbjct: 259 EKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTAL 318
Query: 581 MNALRDAGLQMQAQ 594
+NA GL +A+
Sbjct: 319 VNAFAREGLCEKAE 332
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/514 (21%), Positives = 230/514 (44%), Gaps = 17/514 (3%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P F+S L + K + E A ++ KK + +P ST ++I L + + +
Sbjct: 348 IPSVVSFNSILTCLGKKRKVDE-ALTLFDVMKK--DAKPNISTYNIIIDMLCMAGRVNEA 404
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG----EIALLAFNSA 192
+ ++ ++ + P+ + + +V +A + + A+ + + G + +
Sbjct: 405 YKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDG 464
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR-- 250
+G K+ Y ++EKM AG + Y ++ ++ G E ++ E R
Sbjct: 465 LGKKGKIDDAYR---LFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGG 521
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ D T +T+M D + K+G + F DMK G L D Y+ LI +
Sbjct: 522 RPDLTLLNTYM-----DCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQA 576
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
+ +F+ ++G D +V + G V+K +V+E MK + + +I
Sbjct: 577 RETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSI 636
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
V+G +K A ++E+ S+G + Y+S+I+ + ++ +A + EM +KG
Sbjct: 637 VDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGL 696
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
V ++S++ KT I +A+ MK C PN + Y+ L++ R + +
Sbjct: 697 TPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFV 756
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
W+EM+++ + P+ V+YTT+IS + + F+ NGG+ D A ++ S
Sbjct: 757 FWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMS 816
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ E ++ ++ + G +L+ + S ++AL
Sbjct: 817 NANRPMEAYQVFEETRLRGCRLNVKTCISLLDAL 850
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 128/575 (22%), Positives = 243/575 (42%), Gaps = 75/575 (13%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A+ +++E K RP+ + ++ L ++ + L + +P A+ +
Sbjct: 263 DMAWKFFHELKA-HGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNT 321
Query: 158 LVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMK--- 213
++ A +F A LL+ G I ++++FNS + K + +++ MK
Sbjct: 322 MIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA 381
Query: 214 -----SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----------CKSRKLDS--- 254
+ I++D C + YKI D ++A LF CK+ +L+
Sbjct: 382 KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHR 441
Query: 255 ----------TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--- 301
P S Y L D LGK G+ +A + F M + G +P IY SLI
Sbjct: 442 IFESASERGCNPNSV-TYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNF 500
Query: 302 ---------------------------------CSFASITEVKLAEELFKEAEEKGMLRD 328
C F + EV+ +F++ + G L D
Sbjct: 501 FMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKA-GEVEKGRAIFEDMKSFGFLPD 559
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ + G +T ++ ++M + A+V+G K A +V E
Sbjct: 560 VRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLE 619
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ + P TY SI++ +I +A +F E + KG + V+ YSS++ +GK G
Sbjct: 620 EMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVG 679
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
RI +A ++ +M KG PNV+ +NSLMD + + + + ++ M+ K +P+ +Y+
Sbjct: 680 RIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYS 739
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I+ R ++++ F+ E + G + + M+ +K+ I + L + K+
Sbjct: 740 ILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTN 799
Query: 569 GTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
G D +++ + + +A M+A Q FE T
Sbjct: 800 GGIPDSASFNALIEGMSNANRPMEA---YQVFEET 831
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 195/489 (39%), Gaps = 67/489 (13%)
Query: 149 LPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKL-------HM 201
LP+ C+ LVA+ VR+R+ + A F G + L F Y L
Sbjct: 139 LPNP-ACAALVATLVRSRRLEDA------FRVIGAMRHLKFRPPFSAYTVLIGALAEARQ 191
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
+ + +M+ G + + ++ A + G E AL E K L+ +
Sbjct: 192 PERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEP---DIVL 248
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y + D GK+G A KFF ++K G+ D Y S++ + AEELF + E
Sbjct: 249 YNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQME 308
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC-----AIVNGFSK 376
+ RD M + G E+ D + ++ +L+ CI +I+ K
Sbjct: 309 AE---RDVPCAYAYNTMIMGYGSAERFDDAYKLLE--RLRERGCIPSVVSFNSILTCLGK 363
Query: 377 RRGYWAA--------------VKVYEQLISQGCIPGQVTYAS------------------ 404
+R A + Y +I C+ G+V A
Sbjct: 364 KRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSV 423
Query: 405 --IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+++ C+ +A ++F ++G + V Y S++ GK G+I DA L KM
Sbjct: 424 NIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLD 483
Query: 463 KGCEPNVWIYNSLMD---MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
G + N IY SL+ MHGR ++ K++KEM RR PD T + +A E
Sbjct: 484 AGHDANPIIYTSLIRNFFMHGRKED---GHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGE 540
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ + + + G + D I++ +K Q E + Q M +G LD R Y++
Sbjct: 541 VEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNA 600
Query: 580 AMNALRDAG 588
++ L +G
Sbjct: 601 VVDGLCKSG 609
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 105/256 (41%)
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
E++ +E G C LV + +E V+ +M++ K + ++
Sbjct: 126 EKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGA 185
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
++ R A+++ Q+ G + +++ A R A + E++ +
Sbjct: 186 LAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPD 245
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+V Y+ + +GK G + A ++KA G P+ Y S++ + +A L + E+L+
Sbjct: 246 IVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFG 305
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
+ME + P +Y T+I Y A FD K R G + ++ K
Sbjct: 306 QMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 365
Query: 554 QIEELVKLLQDMKSEG 569
+++E + L MK +
Sbjct: 366 KVDEALTLFDVMKKDA 381
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/559 (21%), Positives = 233/559 (41%), Gaps = 48/559 (8%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKL------PEFRPEKSTLKL 122
+D VPD + + ++G+ K ++ NEAK L E +P
Sbjct: 176 KDMEDYGLVPDGFTYGALINGLCKSRRS--------NEAKALLDEMSCAELKPNVVVYAN 227
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
LI ++ D + ++ V P+ T LV + + A+ LL+ + D
Sbjct: 228 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 287
Query: 183 EIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ +N + G+ + H + +M++AGI + Y ++ + G+ EK +
Sbjct: 288 HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 347
Query: 242 ALFLECKSRKLDSTPF--------------------------------STHMYKILCDSL 269
L E ++ L F + Y L L
Sbjct: 348 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 407
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
K GR E+ K+F M+E+G+L + Y+ LI + +++ AE+L + + G+ +
Sbjct: 408 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 467
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
+ + L+ Y + +EK +SM + + + + I +++ S AA +V +
Sbjct: 468 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSE 527
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ G +P Y+S+I+ C+ A KA + EM +KG D +V Y++++ K+G
Sbjct: 528 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 587
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
I A + + AKG PN Y SL+D + ++ L+ EM +TPD Y+
Sbjct: 588 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 647
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ + + A + + + E + G + ++ G F K +++E +KLL + G
Sbjct: 648 LTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDG-FCKRGKMQETLKLLHVIMGRG 706
Query: 570 TKLDERLYHSAMNALRDAG 588
+ + ++ L +AG
Sbjct: 707 LVPNALTIENIISGLSEAG 725
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 205/482 (42%), Gaps = 22/482 (4%)
Query: 111 PEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKI 170
P R + LK L+R + W + E + PD +T S L+ + + R+F
Sbjct: 80 PSIRCCNALLKDLLRADAMALLW----KVREFMVGAGISPDVYTYSTLIEAYCKVREFDT 135
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
A +L G + + +N + G + + M+ G+V D Y ++
Sbjct: 136 AKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALIN 195
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
K S + AL E +L + +Y L D + G A EA K ++M G
Sbjct: 196 GLCKSRRSNEAKALLDEMSCAELKP---NVVVYANLIDGFMREGNADEAFKMIKEMVAAG 252
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV---- 345
+ + Y +L+ + ++ A L K+ M+RD + I EG
Sbjct: 253 VQPNKITYDNLVRGLCKMGQMDRASLLLKQ-----MVRDSHRPDTITYNLIIEGHFRHHN 307
Query: 346 -EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+ ++ M+NA + + +++G + A + E++ ++G P YA
Sbjct: 308 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 367
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I+ YCR S A ++F +M + + Y+S++ K GR+ ++ A+M+ +G
Sbjct: 368 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 427
Query: 465 CEPNVWIYNSLMDMHGRAKN--LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
PN + Y+ L +HG KN L E+L + M + P+ V Y ++ +Y ++ + +
Sbjct: 428 LLPNEFTYSGL--IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEK 485
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ G ++D I GI++ S +E ++L +++ G+ D +Y S ++
Sbjct: 486 VSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLIS 545
Query: 583 AL 584
L
Sbjct: 546 GL 547
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 167/395 (42%), Gaps = 39/395 (9%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V E M AGI D Y ++EAY K+ + + + +E + R +T Y +L
Sbjct: 104 VREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRER---GCGLNTVTYNVLIA 160
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L +SG EA F +DM++ G++ D Y +LI A+ L E
Sbjct: 161 GLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDE-------- 212
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
M A+LK + + +++GF + A K+
Sbjct: 213 ---------------------------MSCAELKPNVVVYANLIDGFMREGNADEAFKMI 245
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++++ G P ++TY +++ C++ +A + +M + + Y+ ++ + +
Sbjct: 246 KEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRH 305
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
+DA L+++M+ G PNV+ Y+ ++ ++ + L +EM + + P+ Y
Sbjct: 306 HNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 365
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+IS Y R + + +++ + D ++ SK+ ++EE K M+
Sbjct: 366 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE 425
Query: 568 EGTKLDERLYHSAMNA-LRDAGLQMQAQWLQQNFE 601
G +E Y ++ L++ L+ Q +Q+ +
Sbjct: 426 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 460
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/483 (18%), Positives = 199/483 (41%), Gaps = 4/483 (0%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T LI L +S++ + +L ++ + P+ + L+ +R A +
Sbjct: 185 PDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKM 244
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
++ + G + + +++ + G K+ L+ ++M D+ Y I+E +++
Sbjct: 245 IKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFR 304
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ + L E ++ + ++ Y I+ L +SG +A +M KG+ +
Sbjct: 305 HHNKKDAFRLLSEMENAGISPNVYT---YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPN 361
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+YA LI + V LA E+F + + +L D L+ + G VE++
Sbjct: 362 AFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFA 421
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M+ L ++ +++G+ K +A ++ ++++ G P V Y ++ +Y +
Sbjct: 422 QMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSD 481
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
K F M +G Y ++ +G + A ++++++ G P+V +Y+
Sbjct: 482 DIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYS 541
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
SL+ + + + + EM ++ V P+ V Y +I ++ + +N
Sbjct: 542 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 601
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G V + ++ K+ I L +M + G D +Y AG QA
Sbjct: 602 GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA 661
Query: 594 QWL 596
+L
Sbjct: 662 MFL 664
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%)
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
R P V LV Y + G V+ +VV M++ L S A++ + KV
Sbjct: 45 RSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKV 104
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
E ++ G P TY+++I AYC++ + A+KV +EM+++G V Y+ ++A +
Sbjct: 105 REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 164
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
+G + +A M+ G P+ + Y +L++ +++ + + L EM ++ P+ V
Sbjct: 165 SGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVV 224
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y +I + R D K E G ++ +V K+ Q++ LL+ M
Sbjct: 225 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 284
Query: 567 SEGTKLDERLYH 578
+ + D Y+
Sbjct: 285 RDSHRPDTITYN 296
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 34/315 (10%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V +++ G V D Y ++ K D EK + E + +D Y L D
Sbjct: 524 VLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC---YNALID 580
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L KSG A F + KG++ + Y SLI + ++ A L+ E G+
Sbjct: 581 GLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 640
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC--AIVNGFSKRRGYWAAVK 385
D V L G +E+ + ++E M L+ IS +V+GF KR +K
Sbjct: 641 DAFVYSVLTTGCSSAGDLEQAMFLIEEMF---LRGHASISSFNNLVDGFCKRGKMQETLK 697
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS------ 439
+ ++ +G +P +T +II+ S+ +F+E+QQK + +SS
Sbjct: 698 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 757
Query: 440 ------------MVAMYGKTGRIRDAMWL----VAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M+ + K G + A+ L VAK GC Y +++D R
Sbjct: 758 NQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSS----YLAIVDNLCRKG 813
Query: 484 NLRQVEKLWKEMERR 498
L + L KEM++R
Sbjct: 814 KLSEALNLLKEMDKR 828
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%)
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
+V Y K+GR++DA +V M+ +G P++ N+L+ RA + + K+ + M
Sbjct: 53 LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
++PD +Y+T+I AY + REFD K E R G ++ +++ + +EE
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172
Query: 560 KLLQDMKSEGTKLDERLYHSAMNAL 584
+DM+ G D Y + +N L
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGL 197
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 79/218 (36%), Gaps = 57/218 (26%)
Query: 139 LSEDFKIYN------VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSA 192
+S F +YN + PDA S L C A + A L++ G ++ +FN+
Sbjct: 623 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNL 682
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE------ 246
+ G+ K T+ + + G+V ++ I+ + G +V +F+E
Sbjct: 683 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTS 742
Query: 247 --------------------------------CKSRKLD------------STPFSTHMY 262
CK LD S P Y
Sbjct: 743 ESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSY 802
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
+ D+L + G+ EAL ++M ++G L+ P++ A L
Sbjct: 803 LAIVDNLCRKGKLSEALNLLKEMDKRGNLQ-PTLVALL 839
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 221/488 (45%), Gaps = 9/488 (1%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
TL +++ ++ ++D + ++ + + V PD T + +V + RA + A L+
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 217
Query: 179 ITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
++ G + ++ +NS + G + M+ V+++M G+ D + ++ + ++G+
Sbjct: 218 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 277
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
E+ ++ E + R + S + L + G+ A+ + R+M+ G++ D IY
Sbjct: 278 EEALKIYKEMRHRGIKPDLVS---FSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 334
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
+I F + A + E G L D L+ +E + ++ M+
Sbjct: 335 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 394
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ C +++G+ A+++++ +++Q P VTY ++I+ CR K
Sbjct: 395 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 454
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A ++ +M + V YS ++ + + G++ DA + +M KG PN+ YNS++
Sbjct: 455 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 514
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ R+ N+ + +K ++M KV+PD ++Y T+I Y + + K N
Sbjct: 515 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 574
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG-----LQMQ 592
D +++ FS ++E + + M ++G + D Y S +N AG Q+
Sbjct: 575 DVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLH 634
Query: 593 AQWLQQNF 600
+ LQ+ F
Sbjct: 635 DEMLQRGF 642
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 216/477 (45%), Gaps = 18/477 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHT------CSRLVASCVRARKF 168
P+ LLIR QS+K E F+ + ++ D + L+A+ RA
Sbjct: 84 PQPRVFDLLIRTYTQSRK------PREAFEAFRLILDHRVPIPAAASNALLAALSRAGWP 137
Query: 169 KIA-NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
+A + VF ++ E+ N + Y K + V +M+ + D + +
Sbjct: 138 HLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVM 197
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
++A ++ GD+E AL S+ L + Y + L +SG +A + F++M +
Sbjct: 198 VDARFRAGDAEAAMALVDSMVSKGLKPGIVT---YNSVLKGLCRSGMWDKAWEVFKEMDD 254
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
G+ D + LI F + E++ A +++KE +G+ D L+ ++ G ++
Sbjct: 255 FGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDH 314
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+ + M+ L I ++ GF + A++V ++++ GC+P VTY +++N
Sbjct: 315 AMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLN 374
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
C+ AE + EM+++G + +++++ Y G++ A+ L M + P
Sbjct: 375 GLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRP 434
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
++ YN+L+D R +L + LW +M R++ P+ V+Y+ +I ++ + + F
Sbjct: 435 DIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFL 494
Query: 528 NEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+E +N G++ + ++ + + + + K LQ M D Y++ ++
Sbjct: 495 DEM-INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 550
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Query: 378 RGYWA--AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
R W A Y + S T +++ YC+ + K + V EM+++ VV
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 192
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
++ MV + G AM LV M +KG +P + YNS++ R+ + +++KEM
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 252
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ V PD S+T +I + R E + +K Y E R G D ++G+F++ ++
Sbjct: 253 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 312
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+ + L++M+ G D +Y + AGL A ++ G
Sbjct: 313 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVG 359
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 128/570 (22%), Positives = 241/570 (42%), Gaps = 82/570 (14%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A +++E K +P+ + +I L ++ + L + +P A+ +
Sbjct: 132 DMACKFFHELKA-QGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNT 190
Query: 158 LVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMK--- 213
++ A +F+ A LL+ G I ++++FNS + K + ++E MK
Sbjct: 191 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA 250
Query: 214 -----SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----------CKSRKLDSTPF 257
+ I++D C +E Y+I D + A+LF CK+RKL+
Sbjct: 251 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEA-- 308
Query: 258 STHMYKI------------------LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
YKI L D LGK G+ EA + F M + G +P +Y S
Sbjct: 309 ----YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 364
Query: 300 LI------------------------------------CSFASITEVKLAEELFKEAEEK 323
LI C F + EV+ +F++
Sbjct: 365 LIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKA-GEVEKGRMIFEDIRSY 423
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G L D L+ + G +T ++ +MK + A+V+GF K A
Sbjct: 424 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 483
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
++ E++ + P TY +I++ +I +A +F E + KG + VV YSS++
Sbjct: 484 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 543
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+GK GRI +A ++ +M KG PNV+ +NSL+D +A+ + + ++ M+ K P+
Sbjct: 544 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPN 603
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+Y+ +I+ R ++++ F+ + + G V + M+ +K+ I + L +
Sbjct: 604 TYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFE 663
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
K+ G D +++ + + +A M+A
Sbjct: 664 RFKANGGIPDAASFNALIEGMSNANRAMEA 693
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 132/294 (44%), Gaps = 1/294 (0%)
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
S Y LI + A + A EL ++ +E G + LV EG V L +V+
Sbjct: 46 SAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDE 105
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
+K + L+ + ++ F K A K + +L +QG P V+Y S+I C+
Sbjct: 106 VKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGR 165
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+AE++F +M+ + C AY++M+ YG GR DA L+ +++ +GC P+V +NS
Sbjct: 166 LGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNS 225
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
++ G+ + + + L++ M ++ P+ +Y +I + + +E
Sbjct: 226 ILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHAS 284
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ IMV K ++EE K+ + G D Y S ++ L G
Sbjct: 285 LFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKG 338
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 193/480 (40%), Gaps = 49/480 (10%)
Query: 149 LPDAHTCSRLVASCVRARKFKIANTLLQVFITDG---EIALLAFNSAMGGYNKLHMYYST 205
LP+ C+ L A+ VRAR+ + +L V + A A+ +G +
Sbjct: 8 LPN-QACADLAAALVRARRLD--DAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERA 64
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ + +M+ G + + ++ A + G AL E K L+ +Y +
Sbjct: 65 LELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEP---DIVLYNVC 121
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
D GK+G A KFF ++K +G+ D Y S+I + AEELF + E +
Sbjct: 122 IDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS 181
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ +++ Y G E ++E ++ S +I+ K+R A+
Sbjct: 182 VPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALS 241
Query: 386 VYEQL--------------ISQGCIPGQV--------------------TYASIINAYCR 411
++E + I C+ G+V T +++ C+
Sbjct: 242 LFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCK 301
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+A K+F Q+G + V Y S++ GK G++ +A L KM G N +
Sbjct: 302 ARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 361
Query: 472 YNSLMD---MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
Y SL+ +HGR ++ K++KE+ RR PD T + +A E + +
Sbjct: 362 YTSLIRNFFIHGRKED---GHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFE 418
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ R G + D I++ +K Q E + MK +G LD R Y++ ++ +G
Sbjct: 419 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG 478
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 115/253 (45%), Gaps = 6/253 (2%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+PD + + +HG+ K Q +E + ++ A K F + ++ +S K
Sbjct: 426 LPDVRSYSILIHGLTKAGQARETSNIFH--AMKQQGFALDARAYNAVVDGFCKSGKVHKA 483
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+ E+ K V P T +V + + A L + + G E+ ++ ++S + G
Sbjct: 484 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 543
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K+ L+ E+M G+ + + +++A K +E++ + +S K
Sbjct: 544 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVK---AEEINEALVCFQSMKEMKC 600
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P +T+ Y IL + L + + +A F++DM+++G++ + Y ++I A + + A
Sbjct: 601 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYS 660
Query: 316 LFKEAEEKGMLRD 328
LF+ + G + D
Sbjct: 661 LFERFKANGGIPD 673
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 127/564 (22%), Positives = 244/564 (43%), Gaps = 70/564 (12%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A+ +++E + +P++ T +I L ++ + D V + E + +P + +
Sbjct: 255 DMAWKFFHEIEA-NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 158 LVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMK--- 213
++ A KF A +LL+ G I +++A+N + K+ + V+E+MK
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA 373
Query: 214 -----SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----------CKSRKLDST-- 255
+ I++D C ++ +++ DS + A LF CKS+KLD
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 256 PFSTHMYKI----------LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
F YK+ L D LGK GR +A K + M + + +Y SLI +F
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ + +++K+ + D ++ + + G EK + E +K A+ + D
Sbjct: 494 NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK-ARRFVPDA 552
Query: 366 ISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
S +I ++G K +++ + QGC+ Y +I+ +C+ +KA ++ E
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 425 MQQKGFDKCVVA-----------------------------------YSSMVAMYGKTGR 449
M+ KGF+ VV YSS++ +GK GR
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
I +A ++ ++ KG PN++ +NSL+D +A+ + + ++ M+ K TP++V+Y
Sbjct: 673 IDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+I+ + R+F+ F+ E + G M+ +K I E L K+ G
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 570 TKLDERLYHSAMNALRDAGLQMQA 593
D Y++ + L + M A
Sbjct: 793 GVPDSACYNAMIEGLSNGNRAMDA 816
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 114/504 (22%), Positives = 205/504 (40%), Gaps = 93/504 (18%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
+ ++P ++ L + K + E A + E KK + P ST +LI L ++ K
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDE-ALKVFEEMKK--DAAPNLSTYNILIDMLCRAGKL 393
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF----ITDGEIALLAF 189
D+ L + + + P+ T + +V +++K A + + T EI +
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI---------------------- 227
+G ++ Y VYEKM + +S Y +
Sbjct: 454 IDGLGKVGRVDDAYK---VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510
Query: 228 -------------MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGR 274
M+ +K G+ EK A+F E K+R+ P Y IL L K+G
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF--VP-DARSYSILIHGLIKAGF 567
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
A E + F MKE+G + D Y +I F +V A +L +E + KG +P V
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF--EPTV--- 622
Query: 335 LVLMYIEEGL-----VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
+ + +GL +++ + E K+ +++++ I ++++GF K A + E+
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 390 LISQG-----------------------------------CIPGQVTYASIINAYCRIAL 414
L+ +G C P QVTY +IN C++
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
++KA + EMQ++G ++Y++M++ K G I +A L + KA G P+ YN+
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802
Query: 475 LMDMHGRAKNLRQVEKLWKEMERR 498
+++ L++E RR
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETRRR 826
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/504 (19%), Positives = 216/504 (42%), Gaps = 40/504 (7%)
Query: 86 FLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKI 145
F+ G+L+ + A +Y+ ++ E + L+ + + + +D++ + + +
Sbjct: 67 FVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSV 126
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-DGEIALLAFNSAMGGYNKLHMYYS 204
P +TC +V CV+A K + ++Q+ A A+ + +G ++ ++
Sbjct: 127 AGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDM 186
Query: 205 TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKI 264
+ ++++M+ G + ++ + K G + +L E KS LD+ +Y +
Sbjct: 187 MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDA---DIVLYNV 243
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
DS GK G+ A KFF +++ G+ D Y S+I + A E+F+ E
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE--- 300
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
KN ++ + + I+ G+ + A
Sbjct: 301 -------------------------------KNRRVPCTYAYNTMIM-GYGSAGKFDEAY 328
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+ E+ ++G IP + Y I+ ++ +A KVF EM++ + Y+ ++ M
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPN-LSTYNILIDML 387
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ G++ A L M+ G PNV N ++D +++ L + +++EM+ + TPD+
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+++ ++I + D K Y + + + + ++ F + E+ K+ +D
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 565 MKSEGTKLDERLYHSAMNALRDAG 588
M ++ D +L ++ M+ + AG
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAG 531
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/516 (23%), Positives = 216/516 (41%), Gaps = 70/516 (13%)
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNS 191
W +V L K + V PD +T + L++ C R +K A + G E + FNS
Sbjct: 224 WKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNS 283
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL--FLECKS 249
+ Y K + I V ++M+ G Y ++ +Y K G E+ AL +E K
Sbjct: 284 LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 343
Query: 250 RKLDSTPFSTHM------------------------------YKILCDSLGKSGRAFEAL 279
K D ++T + Y L G G+ E +
Sbjct: 344 MKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 403
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
F + + G + D + +L+ F +FKE ++ G + + + + L+ Y
Sbjct: 404 AVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSY 463
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPG 398
GL + + + + M A + A+++ + R G W A K++ ++ + C P
Sbjct: 464 SRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALA-RGGRWEQAEKLFAEMEERDCKPD 522
Query: 399 QVTYASIINAYC-----------------------------------RIALYSKAEKVFI 423
+ +Y+S+++AY ++ ++AEK F+
Sbjct: 523 EYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFL 582
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E++QK + ++MV++YGK +R +++ MK + YNSLM M+ R
Sbjct: 583 ELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLG 642
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ + E + E++ V PD+ SY TVI AY R + + ++E + +G D
Sbjct: 643 DCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYN 702
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
I V + S EE ++L++ M ++G K +ER Y+S
Sbjct: 703 IFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNS 738
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 153/323 (47%), Gaps = 5/323 (1%)
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
S G+ G A AL R++ +G+L P + A+ I A + A L A
Sbjct: 115 SRGQPGAALAALHAARELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPGP---- 170
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKV 386
D LV + G + V M ++ ++ + +++ +SK W V++
Sbjct: 171 DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVEL 230
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ G P + TY ++I+ R ALY +A +VF EM+ GF+ V ++S++ +YGK
Sbjct: 231 VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 290
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
R +A+ ++ +M+ GC P+V YNSL+ + + L Q L +EME + + PD V+
Sbjct: 291 ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVT 350
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
YTT+IS +RA + D + Y+E NG + ++ + + E++ + + +
Sbjct: 351 YTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFR 410
Query: 567 SEGTKLDERLYHSAMNALRDAGL 589
S G D +++ + GL
Sbjct: 411 SAGFVPDIVTWNTLLAVFGQNGL 433
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 208/471 (44%), Gaps = 42/471 (8%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTIL- 207
PDA + LV++ RA +F+ A + + + G + A++ +N + Y+K+ + + ++
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ MK G+ D Y ++ + ++ A +F E K+ + + + L D
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVT---FNSLLD 286
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ R EA++ ++M+ G Y SLI S+ ++ A L +E E KGM
Sbjct: 287 VYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKP 346
Query: 328 D---------------------------------PEVCL--KLVLMYIEEGLVEKTLDVV 352
D P +C L+ M+ G + + V
Sbjct: 347 DVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVF 406
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCR 411
+ ++A + D ++ + + G + V V++++ G IP + TY S+I++Y R
Sbjct: 407 DEFRSAGF-VPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSR 465
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
L+ A +++ M + G V Y+++++ + GR A L A+M+ + C+P+ +
Sbjct: 466 CGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYS 525
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y+SL+ + AK L +++ L ++ ++ P T++ ++ K + E R
Sbjct: 526 YSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 585
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+D + MV ++ K + ++ K+L MK L Y+S M+
Sbjct: 586 QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMH 636
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 170/375 (45%), Gaps = 41/375 (10%)
Query: 252 LDSTPFS-THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA-SLICSFASITE 309
LD+ P Y L + ++GR +A+ FR M + G+ P+I +++ S
Sbjct: 164 LDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGV--QPAIVTYNVVLHVYSKMA 221
Query: 310 VKLAE--ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
V E EL +E G+ D L+ L ++ V + MK + +
Sbjct: 222 VPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTF 281
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++++ + K R + A++V +++ GC P VTY S+I++Y + L +A + EM+
Sbjct: 282 NSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEV 341
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG-RAK--- 483
KG VV Y+++++ + G+I A+ +M GC+PN+ YN+L+ MHG R K
Sbjct: 342 KGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPE 401
Query: 484 ------NLR-------------------------QVEKLWKEMERRKVTPDKVSYTTVIS 512
R +V ++KEM++ P++ +Y ++IS
Sbjct: 402 MMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 461
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+Y+R FD+ ++ Y G D + ++ ++ + E+ KL +M+ K
Sbjct: 462 SYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 521
Query: 573 DERLYHSAMNALRDA 587
DE Y S ++A +A
Sbjct: 522 DEYSYSSLLHAYANA 536
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 157/336 (46%), Gaps = 12/336 (3%)
Query: 260 HMYKILCDS---LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
H ++L + + ++GR EA + D Y +L+ +F+ + A +
Sbjct: 139 HHPRVLATAIRVMARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAGRFRDAVAV 194
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLV---EKTLDVVESMKNAKLKISDCISCAIVNG 373
F+ + G+ P + V++++ + ++ +++V SMK + +++
Sbjct: 195 FRRMVDSGV--QPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISC 252
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+R Y A +V++++ + G P +VT+ S+++ Y + + +A +V EM++ G
Sbjct: 253 CRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPS 312
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VV Y+S+++ Y K G + A+ L +M+ KG +P+V Y +L+ RA + +
Sbjct: 313 VVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYD 372
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
EM R P+ +Y +I + +F + ++EFR G V D ++ VF +
Sbjct: 373 EMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNG 432
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
E+ + ++MK G + Y S +++ GL
Sbjct: 433 LDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 468
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 199/475 (41%), Gaps = 41/475 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F+S L K + E A + E +++ P T LI V+ + V
Sbjct: 276 PDKVTFNSLLDVYGKARRHDE-AIEVIQEMERV-GCPPSVVTYNSLISSYVKDGLLEQAV 333
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+L ++ ++ + PD T + L++ RA K A + +G + L +N+ + +
Sbjct: 334 ALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMH 393
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + V+++ +SAG V D + ++ + + G +V+ +F E K K P
Sbjct: 394 GVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK--KAGYIP 451
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y L S + G A++ ++ M E GI D S Y +++ + A + AE+L
Sbjct: 452 -ERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKL 510
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK---------------------TLDVVESM 355
F E EE+ D L+ Y ++K TL +V S
Sbjct: 511 FAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSK 570
Query: 356 KNA---------KLKISDC-----ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
N +L+ C + A+V+ + K R K+ + T
Sbjct: 571 VNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAAT 630
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y S+++ Y R+ K E + E++ G +Y++++ YG+ G++++A L ++MK
Sbjct: 631 YNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMK 690
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
G +P+V YN + + + +L + M + P++ +Y +++ Y R
Sbjct: 691 CSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 745
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 165/389 (42%), Gaps = 36/389 (9%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P T LI+ K+ ++++ ++F+ +PD T NT
Sbjct: 380 KPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTW----------------NT 423
Query: 174 LLQVFITDG---EIALL--------------AFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
LL VF +G E++ + + S + Y++ ++ + +Y++M AG
Sbjct: 424 LLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG 483
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
I D Y ++ A + G E+ LF E + R +S Y L + + R
Sbjct: 484 IYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYS---YSSLLHAYANAKRLD 540
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+ D+ + I + +L+ + + + AE+ F E +K D V +V
Sbjct: 541 KMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMV 600
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+Y + +V K ++ MK + + +S ++++ +S+ + ++ S G
Sbjct: 601 SIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVR 660
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + +Y ++I AY R +A ++F EM+ G VV Y+ V Y +A+ L
Sbjct: 661 PDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIEL 720
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
V M +GC+PN YNS+++ + R L
Sbjct: 721 VRYMVTQGCKPNERTYNSIVEGYCRNGKL 749
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR-AKNLRQVEKLWKE 494
AY+++V+ + + GR RDA+ + +M G +P + YN ++ ++ + A ++V +L
Sbjct: 174 AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 233
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+ V PD+ +Y T+IS R + + ++E + +G D+ ++ V+ K +
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 293
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+E ++++Q+M+ G Y+S +++ GL QA L+Q E
Sbjct: 294 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME 340
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/516 (23%), Positives = 217/516 (42%), Gaps = 70/516 (13%)
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNS 191
W +V L K + V PD +T + L++ C R +K A + G E + FNS
Sbjct: 224 WKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNS 283
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL--FLECKS 249
+ Y K + I V ++M+ G Y ++ +Y K G E+ AL +E K
Sbjct: 284 LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 343
Query: 250 RKLDSTPFSTHM------------------------------YKILCDSLGKSGRAFEAL 279
K D ++T + Y L G G+ E +
Sbjct: 344 IKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 403
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
F +++ G + D + +L+ F +FKE ++ G + + + + L+ Y
Sbjct: 404 AVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSY 463
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPG 398
GL + + + + M A + A+++ + R G W A K++ ++ + C P
Sbjct: 464 SRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALA-RGGRWEQAEKLFAEMEERDCKPD 522
Query: 399 QVTYASIINAYC-----------------------------------RIALYSKAEKVFI 423
+ +Y+S+++AY ++ ++AEK F+
Sbjct: 523 EYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFL 582
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E++QK + ++MV++YGK +R +++ MK + YNSLM M+ R
Sbjct: 583 ELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLG 642
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ + E + E++ V PD+ SY TVI AY R + + ++E + +G D
Sbjct: 643 DCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYN 702
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
I V + S EE ++L++ M ++G K +ER Y+S
Sbjct: 703 IFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNS 738
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 154/323 (47%), Gaps = 5/323 (1%)
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
S G+ G A AL R++ +G+L P + A+ I A + A L A
Sbjct: 115 SRGQPGAALAALHAARELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPGP---- 170
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKV 386
D LV + G + V M ++ ++ + +++ +SK W V++
Sbjct: 171 DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVEL 230
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ G P + TY ++I+ R ALY +A +VF EM+ GF+ V ++S++ +YGK
Sbjct: 231 VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 290
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
R +A+ ++ +M+ GC P+V YNSL+ + + L Q L +EME + + PD V+
Sbjct: 291 ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVT 350
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
YTT+IS +RA + D + Y+E NG + ++ + + E++ + +++
Sbjct: 351 YTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELR 410
Query: 567 SEGTKLDERLYHSAMNALRDAGL 589
S G D +++ + GL
Sbjct: 411 SAGFVPDIVTWNTLLAVFGQNGL 433
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 171/375 (45%), Gaps = 41/375 (10%)
Query: 252 LDSTPFS-THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA-SLICSFASITE 309
LD+ P Y L + ++GR +A+ FR M + G+ P+I +++ S
Sbjct: 164 LDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGV--QPAIVTYNVVLHVYSKMA 221
Query: 310 VKLAE--ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
V E EL +E G+ D L+ L ++ V + MK + +
Sbjct: 222 VPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTF 281
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++++ + K R + A++V +++ GC P VTY S+I++Y + L +A + EM+
Sbjct: 282 NSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEV 341
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG-RAK--- 483
KG VV Y+++++ + G+I A+ +M GC+PN+ YN+L+ MHG R K
Sbjct: 342 KGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPE 401
Query: 484 ------NLR-------------------------QVEKLWKEMERRKVTPDKVSYTTVIS 512
LR +V ++KEM++ P++ +Y ++IS
Sbjct: 402 MMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 461
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+Y+R FD+ ++ Y G D + ++ ++ + E+ KL +M+ K
Sbjct: 462 SYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 521
Query: 573 DERLYHSAMNALRDA 587
DE Y S ++A +A
Sbjct: 522 DEYSYSSLLHAYANA 536
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 209/471 (44%), Gaps = 42/471 (8%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTIL- 207
PDA + LV++ RA +F+ A + + + G + A++ +N + Y+K+ + + ++
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ MK G+ D Y ++ + ++ A +F E K+ + + + L D
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVT---FNSLLD 286
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ R EA++ ++M+ G Y SLI S+ ++ A L +E E KG+
Sbjct: 287 VYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKP 346
Query: 328 D---------------------------------PEVCL--KLVLMYIEEGLVEKTLDVV 352
D P +C L+ M+ G + + V
Sbjct: 347 DVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVF 406
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCR 411
+ +++A + D ++ + + G + V V++++ G IP + TY S+I++Y R
Sbjct: 407 DELRSAGF-VPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSR 465
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
L+ A +++ M + G V Y+++++ + GR A L A+M+ + C+P+ +
Sbjct: 466 CGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYS 525
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y+SL+ + AK L +++ L ++ ++ P T++ ++ K + E R
Sbjct: 526 YSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 585
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+D + MV ++ K + ++ K+L MK L Y+S M+
Sbjct: 586 QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMH 636
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 156/336 (46%), Gaps = 12/336 (3%)
Query: 260 HMYKILCDS---LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
H ++L + + ++GR EA + D Y +L+ +F+ + A +
Sbjct: 139 HHPRVLATAIRVMARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAGRFRDAVAV 194
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLV---EKTLDVVESMKNAKLKISDCISCAIVNG 373
F+ + G+ P + V++++ + ++ +++V SMK + +++
Sbjct: 195 FRRMVDSGV--QPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISC 252
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+R Y A +V++++ + G P +VT+ S+++ Y + + +A +V EM++ G
Sbjct: 253 CRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPS 312
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VV Y+S+++ Y K G + A+ L +M+ KG +P+V Y +L+ RA + +
Sbjct: 313 VVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYD 372
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
EM R P+ +Y +I + +F + ++E R G V D ++ VF +
Sbjct: 373 EMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNG 432
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
E+ + ++MK G + Y S +++ GL
Sbjct: 433 LDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 468
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 200/475 (42%), Gaps = 41/475 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F+S L K + E A + E +++ P T LI V+ + V
Sbjct: 276 PDKVTFNSLLDVYGKARRHDE-AIEVIQEMERV-GCPPSVVTYNSLISSYVKDGLLEQAV 333
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+L ++ ++ + PD T + L++ RA K A + +G + L +N+ + +
Sbjct: 334 ALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMH 393
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + V+++++SAG V D + ++ + + G +V+ +F E K K P
Sbjct: 394 GVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK--KAGYIP 451
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y L S + G A++ ++ M E GI D S Y +++ + A + AE+L
Sbjct: 452 -ERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKL 510
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK---------------------TLDVVESM 355
F E EE+ D L+ Y ++K TL +V S
Sbjct: 511 FAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSK 570
Query: 356 KNA---------KLKISDC-----ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
N +L+ C + A+V+ + K R K+ + T
Sbjct: 571 VNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAAT 630
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y S+++ Y R+ K E + E++ G +Y++++ YG+ G++++A L ++MK
Sbjct: 631 YNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMK 690
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
G +P+V YN + + + +L + M + P++ +Y +++ Y R
Sbjct: 691 CSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 745
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR-AKNLRQVEKLWKE 494
AY+++V+ + + GR RDA+ + +M G +P + YN ++ ++ + A ++V +L
Sbjct: 174 AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 233
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+ V PD+ +Y T+IS R + + ++E + +G D+ ++ V+ K +
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 293
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+E ++++Q+M+ G Y+S +++ GL QA L+Q E
Sbjct: 294 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME 340
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/516 (23%), Positives = 216/516 (41%), Gaps = 70/516 (13%)
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNS 191
W +V L K + V PD +T + L++ C R +K A + G E + FNS
Sbjct: 206 WKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNS 265
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL--FLECKS 249
+ Y K + I V ++M+ G Y ++ +Y K G E+ AL +E K
Sbjct: 266 LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 325
Query: 250 RKLDSTPFSTHM------------------------------YKILCDSLGKSGRAFEAL 279
K D ++T + Y L G G+ E +
Sbjct: 326 MKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 385
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
F + + G + D + +L+ F +FKE ++ G + + + + L+ Y
Sbjct: 386 AVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSY 445
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPG 398
GL + + + + M A + A+++ + R G W A K++ ++ + C P
Sbjct: 446 SRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALA-RGGRWEQAEKLFAEMEERDCKPD 504
Query: 399 QVTYASIINAYC-----------------------------------RIALYSKAEKVFI 423
+ +Y+S+++AY ++ ++AEK F+
Sbjct: 505 EYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFL 564
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E++QK + ++MV++YGK +R +++ MK + YNSLM M+ R
Sbjct: 565 ELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLG 624
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ + E + E++ V PD+ SY TVI AY R + + ++E + +G D
Sbjct: 625 DCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYN 684
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
I V + S EE ++L++ M ++G K +ER Y+S
Sbjct: 685 IFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNS 720
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 208/471 (44%), Gaps = 42/471 (8%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTIL- 207
PDA + LV++ RA +F+ A + + + G + A++ +N + Y+K+ + + ++
Sbjct: 152 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 211
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ MK G+ D Y ++ + ++ A +F E K+ + + + L D
Sbjct: 212 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVT---FNSLLD 268
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ R EA++ ++M+ G Y SLI S+ ++ A L +E E KGM
Sbjct: 269 VYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKP 328
Query: 328 D---------------------------------PEVCL--KLVLMYIEEGLVEKTLDVV 352
D P +C L+ M+ G + + V
Sbjct: 329 DVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVF 388
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCR 411
+ ++A + D ++ + + G + V V++++ G IP + TY S+I++Y R
Sbjct: 389 DEFRSAGF-VPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSR 447
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
L+ A +++ M + G V Y+++++ + GR A L A+M+ + C+P+ +
Sbjct: 448 CGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYS 507
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y+SL+ + AK L +++ L ++ ++ P T++ ++ K + E R
Sbjct: 508 YSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 567
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+D + MV ++ K + ++ K+L MK L Y+S M+
Sbjct: 568 QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMH 618
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 146/308 (47%), Gaps = 5/308 (1%)
Query: 283 RDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
R++ +G+L P + A+ I A + A L A D LV +
Sbjct: 112 RELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPGP----DAGAYTALVSAFSRA 167
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPGQVT 401
G + V M ++ ++ + +++ +SK W V++ + G P + T
Sbjct: 168 GRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYT 227
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y ++I+ R ALY +A +VF EM+ GF+ V ++S++ +YGK R +A+ ++ +M+
Sbjct: 228 YNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEME 287
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
GC P+V YNSL+ + + L Q L +EME + + PD V+YTT+IS +RA + D
Sbjct: 288 RVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKID 347
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ Y+E NG + ++ + + E++ + + +S G D +++ +
Sbjct: 348 AAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLL 407
Query: 582 NALRDAGL 589
GL
Sbjct: 408 AVFGQNGL 415
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 170/375 (45%), Gaps = 41/375 (10%)
Query: 252 LDSTPFS-THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA-SLICSFASITE 309
LD+ P Y L + ++GR +A+ FR M + G+ P+I +++ S
Sbjct: 146 LDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGV--QPAIVTYNVVLHVYSKMA 203
Query: 310 VKLAE--ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
V E EL +E G+ D L+ L ++ V + MK + +
Sbjct: 204 VPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTF 263
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++++ + K R + A++V +++ GC P VTY S+I++Y + L +A + EM+
Sbjct: 264 NSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEV 323
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG-RAK--- 483
KG VV Y+++++ + G+I A+ +M GC+PN+ YN+L+ MHG R K
Sbjct: 324 KGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPE 383
Query: 484 ------NLR-------------------------QVEKLWKEMERRKVTPDKVSYTTVIS 512
R +V ++KEM++ P++ +Y ++IS
Sbjct: 384 MMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 443
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+Y+R FD+ ++ Y G D + ++ ++ + E+ KL +M+ K
Sbjct: 444 SYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 503
Query: 573 DERLYHSAMNALRDA 587
DE Y S ++A +A
Sbjct: 504 DEYSYSSLLHAYANA 518
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 157/336 (46%), Gaps = 12/336 (3%)
Query: 260 HMYKILCDS---LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
H ++L + + ++GR EA + D Y +L+ +F+ + A +
Sbjct: 121 HHPRVLATAIRVMARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAGRFRDAVAV 176
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLV---EKTLDVVESMKNAKLKISDCISCAIVNG 373
F+ + G+ P + V++++ + ++ +++V SMK + +++
Sbjct: 177 FRRMVDSGV--QPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISC 234
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+R Y A +V++++ + G P +VT+ S+++ Y + + +A +V EM++ G
Sbjct: 235 CRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPS 294
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VV Y+S+++ Y K G + A+ L +M+ KG +P+V Y +L+ RA + +
Sbjct: 295 VVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYD 354
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
EM R P+ +Y +I + +F + ++EFR G V D ++ VF +
Sbjct: 355 EMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNG 414
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
E+ + ++MK G + Y S +++ GL
Sbjct: 415 LDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 450
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 199/475 (41%), Gaps = 41/475 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F+S L K + E A + E +++ P T LI V+ + V
Sbjct: 258 PDKVTFNSLLDVYGKARRHDE-AIEVIQEMERV-GCPPSVVTYNSLISSYVKDGLLEQAV 315
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+L ++ ++ + PD T + L++ RA K A + +G + L +N+ + +
Sbjct: 316 ALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMH 375
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + V+++ +SAG V D + ++ + + G +V+ +F E K K P
Sbjct: 376 GVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK--KAGYIP 433
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y L S + G A++ ++ M E GI D S Y +++ + A + AE+L
Sbjct: 434 -ERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKL 492
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK---------------------TLDVVESM 355
F E EE+ D L+ Y ++K TL +V S
Sbjct: 493 FAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSK 552
Query: 356 KNA---------KLKISDC-----ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
N +L+ C + A+V+ + K R K+ + T
Sbjct: 553 VNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAAT 612
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y S+++ Y R+ K E + E++ G +Y++++ YG+ G++++A L ++MK
Sbjct: 613 YNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMK 672
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
G +P+V YN + + + +L + M + P++ +Y +++ Y R
Sbjct: 673 CSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 727
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 165/389 (42%), Gaps = 36/389 (9%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P T LI+ K+ ++++ ++F+ +PD T NT
Sbjct: 362 KPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTW----------------NT 405
Query: 174 LLQVFITDG---EIALL--------------AFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
LL VF +G E++ + + S + Y++ ++ + +Y++M AG
Sbjct: 406 LLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG 465
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
I D Y ++ A + G E+ LF E + R +S Y L + + R
Sbjct: 466 IYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYS---YSSLLHAYANAKRLD 522
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+ D+ + I + +L+ + + + AE+ F E +K D V +V
Sbjct: 523 KMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMV 582
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+Y + +V K ++ MK + + +S ++++ +S+ + ++ S G
Sbjct: 583 SIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVR 642
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + +Y ++I AY R +A ++F EM+ G VV Y+ V Y +A+ L
Sbjct: 643 PDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIEL 702
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
V M +GC+PN YNS+++ + R L
Sbjct: 703 VRYMVTQGCKPNERTYNSIVEGYCRNGKL 731
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR-AKNLRQVEKLWKE 494
AY+++V+ + + GR RDA+ + +M G +P + YN ++ ++ + A ++V +L
Sbjct: 156 AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 215
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+ V PD+ +Y T+IS R + + ++E + +G D+ ++ V+ K +
Sbjct: 216 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 275
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+E ++++Q+M+ G Y+S +++ GL QA L+Q E
Sbjct: 276 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME 322
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 222/488 (45%), Gaps = 8/488 (1%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A D + + + +P + L+ V+ +WD S S F+ +V P+ T + L+
Sbjct: 99 ALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILI 158
Query: 160 ASCVRARKFKIANTLLQ-VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
+ ++ + A +LL ++ + + + ++ + + G K+ + V+++M G+V
Sbjct: 159 KISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVV 218
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
D CY +++ ++K GD +K ++ E + P + Y I+ + L K GR E+
Sbjct: 219 ADVTCYNMLIDGFFKHGDYDKGKEIW-ERLVKDCSVYP-NVVTYNIMINGLCKCGRFDES 276
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
L+ + M + +D Y+SLI + A ++KE E ++ D ++
Sbjct: 277 LEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNG 336
Query: 339 YIEEGLVEKTLDV--VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+ G ++++ ++ V +N + +S I ++ G + A+ ++E L +GC
Sbjct: 337 FCRAGKIKESFELWMVMGKENCQTVVSYNI---LIKGLFENGKVEEAISIWELLCKKGCR 393
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P TY +I+ C+ +KA K+F E + AYSSMV K GR+ +A+ +
Sbjct: 394 PESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISI 453
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
V +M +G + + + N L++ RA L ++EME + +P VSY T+I +
Sbjct: 454 VNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCK 513
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
A F F E D +++ + +IE + L Q +G K D +
Sbjct: 514 AERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITM 573
Query: 577 YHSAMNAL 584
Y+ M+ L
Sbjct: 574 YNILMHGL 581
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 171/387 (44%), Gaps = 4/387 (1%)
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
E + ++S + G + + VY+++ + +V+D+ + ++ + + G ++
Sbjct: 289 EKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFE 348
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L++ + Y IL L ++G+ EA+ + + +KG + + Y LI
Sbjct: 349 LWMVMGKENCQTVV----SYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIH 404
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ A ++FKEAE+ D +V +EG +++ + +V M K+
Sbjct: 405 GLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKL 464
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
+ ++NGF + A+ + ++ +GC P V+Y ++I C+ +S+A
Sbjct: 465 DPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFV 524
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
EM +K + ++ S ++ + +I A+ L + KG +P++ +YN LM
Sbjct: 525 KEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSV 584
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
L +L+ M+R P+ V+ T++ + R+++ + ++ +G D
Sbjct: 585 CKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISY 644
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEG 569
I + S+I + ++ L D + G
Sbjct: 645 NITIKGLCSCSRISDAIEFLNDALNRG 671
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/444 (19%), Positives = 181/444 (40%), Gaps = 60/444 (13%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ ++ ++G+ K + E + + + K E + T LI L ++ D V
Sbjct: 255 PNVVTYNIMINGLCKCGRFDE-SLEIWERMTK-NEREKDMFTYSSLIHGLCEAGNIDGAV 312
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
+ ++ +++ DA T + ++ RA K K + L V + ++++N + G
Sbjct: 313 RVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLF 372
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR--KLDST 255
+ I ++E + G +S Y ++ K G K +F E + KLD+
Sbjct: 373 ENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAY 432
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+S+ + D L K GR EA+ M ++G DP + LI F ++++ A
Sbjct: 433 AYSS-----MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAIN 487
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVE-----KTLDVVESMKNAKLKISDCISC 368
F+E E KG C ++ Y + +GL + + V+ M + K D I+C
Sbjct: 488 FFREMECKG-------CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWK-PDMITC 539
Query: 369 AIV-NGFSKRRGYWAAVKVYEQLISQG--------------------------------- 394
+++ +G + + A+ +++Q + +G
Sbjct: 540 SLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKR 599
Query: 395 --CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
C+P VT +++ ++ Y KA +++ + + G +++Y+ + RI D
Sbjct: 600 STCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISD 659
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLM 476
A+ + +G P +N L+
Sbjct: 660 AIEFLNDALNRGILPTAVTWNILV 683
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 101/225 (44%), Gaps = 2/225 (0%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCI-PGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++GF K Y +++E+L+ + P VTY +IN C+ + ++ +++ M +
Sbjct: 227 LIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKN 286
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
+K + YSS++ + G I A+ + ++ + +N++++ RA +++
Sbjct: 287 EREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKES 346
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+LW M + VSY +I + + + + G + G+++
Sbjct: 347 FELWMVMGKENCQT-VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHG 405
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
K ++ + +K+ ++ + KLD Y S ++ L G +A
Sbjct: 406 LCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEA 450
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/268 (18%), Positives = 107/268 (39%), Gaps = 16/268 (5%)
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC--------AIVNGFSKRRGYW 381
+V L ++ Y + + K LD ++M+ D C ++N F + +
Sbjct: 81 DVALTVIKAYAKNKMSNKALDTFQNMQ-------DIFGCKPGVRSYNTLLNAFVELNEWD 133
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A S P TY +I C+ KA + M + V +Y +++
Sbjct: 134 RAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLI 193
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR-KV 500
K G + A+ + +M +G +V YN L+D + + + +++W+ + + V
Sbjct: 194 NGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSV 253
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
P+ V+Y +I+ + FD ++ + N D ++ + I+ V+
Sbjct: 254 YPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVR 313
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ +++ +D +++ +N AG
Sbjct: 314 VYKEIVESSLVVDAVTHNAMLNGFCRAG 341
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 197/438 (44%), Gaps = 15/438 (3%)
Query: 78 PDAKKFDSFLHGMLK--DPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
P A + S + +K D Q L Y +AK F P+ +T +LI L ++ + +
Sbjct: 63 PTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAK----FVPDHTTFNILIDSLAKADQVEE 118
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMG 194
++ D NV PD +T + L+ S + L + G + L ++S M
Sbjct: 119 ACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMH 178
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
+ ++++M G+ D+ Y +++A+ K G E+ A KSR
Sbjct: 179 AFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLER--AFDFVGKSRS--- 233
Query: 255 TPFSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
F+ + Y L SLG+ G ++ F MK KG++ + YA LI V+
Sbjct: 234 --FTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDV 291
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+L+ E + + D ++ + G VE ++ + MK L ++NG
Sbjct: 292 WQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILING 351
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+ AA + ++ GC P +TY ++I++Y + + S A ++F+EM+++G
Sbjct: 352 LGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPN 411
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VV+YSS++ +GK GR A+ L +MKA+GC PN YN L+D RA + +
Sbjct: 412 VVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLR 471
Query: 494 EMERRKVTPDKVSYTTVI 511
EM KV+ + ++
Sbjct: 472 EMRDAGCQMGKVTKSLLV 489
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/471 (20%), Positives = 210/471 (44%), Gaps = 61/471 (12%)
Query: 157 RLVASCVRAR---KFKIANTLLQVF----ITDGEIALLAFNSAMGGYNKLHMYYSTI--- 206
RLV S + R ++ NTL+ ++ + + + LA + GG + Y S I
Sbjct: 16 RLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVF 75
Query: 207 ----------LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
L+Y++M A V D + ++++ K E+ +F + KL+ +P
Sbjct: 76 MKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDM--FKLNVSP 133
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y IL SLG GR +K F M +G + Y S++ +F S V A ++
Sbjct: 134 -DVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDI 192
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F++ +KG+ D L+ + + G +E+ D V ++ +++ ++++ +
Sbjct: 193 FQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVT---YNSLLSSLGR 249
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYA--------------------------------- 403
+ ++++ Q+ ++G + ++TYA
Sbjct: 250 KGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVT 309
Query: 404 --SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
++++ + A ++F +M+ KG + V Y+ ++ G+ G++ A L+ +M+
Sbjct: 310 INNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEME 369
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
GC PN+ YN+L+ +G+ NL +L+ EM+ R V P+ VSY+++I + +A D
Sbjct: 370 ENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTD 429
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ + E + G + +++ + + ++ L++M+ G ++
Sbjct: 430 AAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQM 480
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 197/432 (45%), Gaps = 5/432 (1%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYST 205
N+LP+ L+ +A + IA L + + G E +S + +
Sbjct: 292 NILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEA 351
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+++ M S G++ D Y +M+ ++K G + E + S+ F Y +L
Sbjct: 352 DELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK---SSGFDVVAYNVL 408
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ L K G+ +E+ F M++ G+ D + + ++I ++ + A +L E + G+
Sbjct: 409 INGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGL 467
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ C LV G +EKT+D++ M + A+++ SK R +
Sbjct: 468 KPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILH 527
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+++QL+ G TY ++I+ +CR+ + +A VF +M KG ++ Y++++ Y
Sbjct: 528 MHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYC 587
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+ ++ A + ++M +G PNV YN L+ A+ +++ L +M+ R + P+
Sbjct: 588 ISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNAT 647
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y ++S + + CVK Y E G V +++ F+K ++ + +L+Q+M
Sbjct: 648 TYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEM 707
Query: 566 KSEGTKLDERLY 577
+ G + Y
Sbjct: 708 QVRGIPPNSSTY 719
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 181/400 (45%), Gaps = 3/400 (0%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
FN + GY + + + E MK+ G D Y +M + KIGD L E
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
L+ + Y L D+ KS +AL + +M K ++ D Y ++
Sbjct: 80 LVNLEPNVIT---YTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSG 136
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+V+ A+ +F+E EE G++ + L+ +EG V + + M + +
Sbjct: 137 KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
A+++G K A +++ L+ + +P VTY+++I+ +C++ +K E + EM++K
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
V+ YSS+V Y K G + +AM ++ KM + PNV++Y +L+D + +A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
L+KEM+ R + + + ++ R+ + + + + G + DR M+
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
F K + + + Q+M + + D Y+ +N L G
Sbjct: 377 FFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG 416
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/476 (20%), Positives = 207/476 (43%), Gaps = 17/476 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T ++ L +S K + S+ + + V+P+ + + L+ S FK N +
Sbjct: 120 PDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSL-----FKEGN-V 173
Query: 175 LQVFITDGEIAL-------LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
+ F+ G + + + + + M G K M + +++ + +V + Y +
Sbjct: 174 AEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSAL 233
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
++ + K+GD K L E + + + +Y + D K G EA+ R M +
Sbjct: 234 IDGHCKLGDVNKGELLLQEMEEKHIFPNVI---VYSSIVDGYTKKGLLNEAMDVMRKMVQ 290
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
+ IL + +Y +LI + + +A +LFKE + +G+ + V V G +E+
Sbjct: 291 RNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEE 350
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
++ + M + L ++++GF K A + +++ + V Y +IN
Sbjct: 351 ADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLIN 410
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
++ Y ++E M+Q G +++M+ Y K G + +A+ L+ +MK+ G +P
Sbjct: 411 GLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKP 469
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
N N L+ A + + L +M P ++ V+ A +++R D+ + +
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMH 529
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++ G +D + ++ F +L I + +DM +G D Y++ ++
Sbjct: 530 DQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHG 585
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 93/197 (47%)
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ +I+ YCR S+A ++ M+ +G +V Y++++ + K G + A L+ ++
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
EPNV Y +L+D + +++ L ++ EM + + PD V+YT +++ ++ + +
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ E G V +R ++ K + E L M G D +Y + M
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 582 NALRDAGLQMQAQWLQQ 598
+ L AG+ A+ + Q
Sbjct: 200 DGLFKAGMANNAEDMFQ 216
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 84/172 (48%)
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
Q + V ++ ++ Y + G I A+ L+ MK +G P++ YN+LM+ + +L
Sbjct: 9 QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+KL E+ + P+ ++YTT+I AY +++ + + Y+E + V D +
Sbjct: 69 FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQ 597
+ K ++EE + ++M+ G + Y + +++L G +A LQ
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQ 180
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 121/559 (21%), Positives = 232/559 (41%), Gaps = 48/559 (8%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKL------PEFRPEKSTLKL 122
+D VPD + + ++G+ K ++ NEAK L E +P
Sbjct: 281 KDMEDYGLVPDGFTYGALINGLCKSRRS--------NEAKALLDEMSCAELKPNVVVYAN 332
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
LI ++ D + ++ V P+ T LV + + A+ LL+ + D
Sbjct: 333 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 392
Query: 183 EIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ +N + G+ + H + +M++AGI + Y ++ + G+ EK +
Sbjct: 393 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 452
Query: 242 ALFLECKSRKLDSTPF--------------------------------STHMYKILCDSL 269
L E ++ L F + Y L L
Sbjct: 453 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 512
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
K GR E+ K+F M+E+G+L + Y+ LI + +++ AE+L + + G+ +
Sbjct: 513 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 572
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
+ + L+ Y + +EK +SM + + + + I +++ S AA +V
Sbjct: 573 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSG 632
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ G +P Y+S+I+ C+ A KA + EM +KG D +V Y++++ K+G
Sbjct: 633 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 692
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
I A + + AKG PN Y SL+D + ++ L+ EM +TPD Y+
Sbjct: 693 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 752
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ + + A + + + E + G + ++ G F K +++E +KLL + G
Sbjct: 753 LTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDG-FCKRGKMQETLKLLHVIMGRG 811
Query: 570 TKLDERLYHSAMNALRDAG 588
+ + ++ L +AG
Sbjct: 812 LVPNALTIENIISGLSEAG 830
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 156/356 (43%), Gaps = 3/356 (0%)
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
G + +EAY K+ + + + +E + R +T Y +L L +SG EA F
Sbjct: 223 GRHGSALEAYCKVREFDTAKKVLVEMRER---GCGLNTVTYNVLIAGLCRSGAVEEAFGF 279
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+DM++ G++ D Y +LI A+ L E + + V L+ ++
Sbjct: 280 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 339
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
EG ++ +++ M A ++ + +V G K A + +Q++ P +T
Sbjct: 340 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 399
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y II + R A ++ EM+ G V YS M+ ++G A L+ +M
Sbjct: 400 YNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 459
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
KG +PN ++Y L+ + R N+ +++ +M + V PD Y ++I ++ +
Sbjct: 460 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 519
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
K++ + + G + + ++ + K +E +L+Q M G K ++ +Y
Sbjct: 520 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 575
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/511 (18%), Positives = 202/511 (39%), Gaps = 33/511 (6%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QV 177
T +LI L +S + +D + Y ++PD T L+ ++R+ A LL ++
Sbjct: 259 TYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEM 318
Query: 178 FITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
+ + ++ + + + G+ + + ++M +AG+ + Y ++ K+G
Sbjct: 319 SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQM 378
Query: 238 EKVAALFLEC--KSRKLDSTPFS------------------------------THMYKIL 265
++ + L + S + D+ ++ + Y I+
Sbjct: 379 DRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIM 438
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
L +SG +A +M KG+ + +YA LI + V LA E+F + + +
Sbjct: 439 IHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV 498
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
L D L+ + G VE++ M+ L ++ +++G+ K +A +
Sbjct: 499 LPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQ 558
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+ ++++ G P V Y ++ +Y + K F M +G Y ++
Sbjct: 559 LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLS 618
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+G + A +++ ++ G P+V +Y+SL+ + + + + EM ++ V P+ V
Sbjct: 619 SSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIV 678
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
Y +I ++ + +N G V + ++ K+ I L +M
Sbjct: 679 CYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEM 738
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ G D +Y AG QA +L
Sbjct: 739 LATGITPDAFVYSVLTTGCSSAGDLEQAMFL 769
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 127/315 (40%), Gaps = 34/315 (10%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V ++ G V D Y ++ K D EK + E + +D Y L D
Sbjct: 629 VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC---YNALID 685
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L KSG A F + KG++ + Y SLI + ++ A L+ E G+
Sbjct: 686 GLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 745
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC--AIVNGFSKRRGYWAAVK 385
D V L G +E+ + ++E M L+ IS +V+GF KR +K
Sbjct: 746 DAFVYSVLTTGCSSAGDLEQAMFLIEEMF---LRGHASISSFNNLVDGFCKRGKMQETLK 802
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS------ 439
+ ++ +G +P +T +II+ S+ +F+E+QQK + +SS
Sbjct: 803 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 862
Query: 440 ------------MVAMYGKTGRIRDAMWL----VAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M+ + K G + A+ L VAK GC Y +++D R
Sbjct: 863 NQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSS----YLAIVDNLCRKG 918
Query: 484 NLRQVEKLWKEMERR 498
L + L KEM++R
Sbjct: 919 KLSEALNLLKEMDKR 933
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 79/218 (36%), Gaps = 57/218 (26%)
Query: 139 LSEDFKIYN------VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSA 192
+S F +YN + PDA S L C A + A L++ G ++ +FN+
Sbjct: 728 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNL 787
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE------ 246
+ G+ K T+ + + G+V ++ I+ + G +V +F+E
Sbjct: 788 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTS 847
Query: 247 --------------------------------CKSRKLD------------STPFSTHMY 262
CK LD S P Y
Sbjct: 848 ESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSY 907
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
+ D+L + G+ EAL ++M ++G L+ P++ A L
Sbjct: 908 LAIVDNLCRKGKLSEALNLLKEMDKRGNLQ-PTLVALL 944
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 117/503 (23%), Positives = 219/503 (43%), Gaps = 43/503 (8%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS--------------------- 161
L+ L QS +DSI +L + K +P+A T + L+ S
Sbjct: 61 LLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGFK 120
Query: 162 ------------CVRARKFKIANTLLQVFITDGEIALLA-FNSAMGGYNKLHMYYSTILV 208
V K K+ L + +G + ++ FN + K H IL+
Sbjct: 121 PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILM 180
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM-YKILCD 267
E+M + G+ D + +M+ + + GD L+ K + L T++ K+L +
Sbjct: 181 LEEMANHGLKPDEITFTTLMQGFIEEGDLNGA----LKMKKQMLGYGCLLTNVSVKVLVN 236
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
K GR EAL+F ++ E+G D + SL+ F I V A ++ EKG
Sbjct: 237 GFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGF-- 294
Query: 328 DPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
DP+V L+ + G EK +++++ M + + +++ K AA
Sbjct: 295 DPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATD 354
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+ L+S+G +P T+ ++I C A ++F EM+ KG YS ++
Sbjct: 355 LARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLC 414
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
R+++A+ L+ +M++ GC N +YN+L+D +++ + E+++ +ME V+ V
Sbjct: 415 YERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSV 474
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y T+I + + + + ++ M G D+ ++ F ++ IE+ ++Q M
Sbjct: 475 TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTM 534
Query: 566 KSEGTKLDERLYHSAMNALRDAG 588
S G + D Y + + L AG
Sbjct: 535 ASNGCEPDIFTYGTLIGGLCRAG 557
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 179/430 (41%), Gaps = 10/430 (2%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
PD T + LV R A ++ I G + + +NS + G KL + I +
Sbjct: 261 PDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEI 320
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL--FLECKSRKLDSTPFSTHMYKILC 266
++M ++ Y ++ A K + E L L K D F+T + + LC
Sbjct: 321 LQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNT-LIQGLC 379
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
S + A++ F +MK KG D Y+ LI S +K A L KE E G
Sbjct: 380 LSKNQD----IAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCA 435
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
R+ V L+ + +E ++ + M+ + S +++G K + A ++
Sbjct: 436 RNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQL 495
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+Q+I +G P + TY S++ +CR+ KA + M G + + Y +++ +
Sbjct: 496 MDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCR 555
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
GR+ A L+ ++ KG YN ++ K ++ +L++EM + PD ++
Sbjct: 556 AGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALT 615
Query: 507 YTTVISAY-NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+ V N + F E G + + G + LS + L++L+ +M
Sbjct: 616 HKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELI-NM 674
Query: 566 KSEGTKLDER 575
E ++ ER
Sbjct: 675 VMEKAQMSER 684
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 7/257 (2%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVS 138
+A +++ + G+ K + ++ A + +++ + L R T LI L ++K+ +
Sbjct: 437 NAVVYNTLIDGLCKSRRIED-AEEIFDQMELLGVSR-SSVTYNTLIDGLCKNKRVEEASQ 494
Query: 139 LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYN 197
L + + + PD T + L+ R + A ++Q ++G E + + + +GG
Sbjct: 495 LMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLC 554
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
+ + ++ GIVL Y +++A + +++ LF E + S P
Sbjct: 555 RAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEK---SDPP 611
Query: 258 STHMYKILCDSLGKSGRAF-EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+KI+ L G EA+ F +M EKGIL + + L S++ EL
Sbjct: 612 DALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIEL 671
Query: 317 FKEAEEKGMLRDPEVCL 333
EK + + E +
Sbjct: 672 INMVMEKAQMSERETSM 688
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 121/559 (21%), Positives = 232/559 (41%), Gaps = 48/559 (8%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKL------PEFRPEKSTLKL 122
+D VPD + + ++G+ K ++ NEAK L E +P
Sbjct: 303 KDMEDYGLVPDGFTYGALINGLCKSRRS--------NEAKALLDEMSCAELKPNVVVYAN 354
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
LI ++ D + ++ V P+ T LV + + A+ LL+ + D
Sbjct: 355 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 414
Query: 183 EIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ +N + G+ + H + +M++AGI + Y ++ + G+ EK +
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 474
Query: 242 ALFLECKSRKLDSTPF--------------------------------STHMYKILCDSL 269
L E ++ L F + Y L L
Sbjct: 475 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 534
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
K GR E+ K+F M+E+G+L + Y+ LI + +++ AE+L + + G+ +
Sbjct: 535 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 594
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
+ + L+ Y + +EK +SM + + + + I +++ S AA +V
Sbjct: 595 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSG 654
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ G +P Y+S+I+ C+ A KA + EM +KG D +V Y++++ K+G
Sbjct: 655 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 714
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
I A + + AKG PN Y SL+D + ++ L+ EM +TPD Y+
Sbjct: 715 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 774
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ + + A + + + E + G + ++ G F K +++E +KLL + G
Sbjct: 775 LTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDG-FCKRGKMQETLKLLHVIMGRG 833
Query: 570 TKLDERLYHSAMNALRDAG 588
+ + ++ L +AG
Sbjct: 834 LVPNALTIENIISGLSEAG 852
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 204/482 (42%), Gaps = 22/482 (4%)
Query: 111 PEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKI 170
P R + LK L+R + W + E + PD +T S L+ + + R+F
Sbjct: 207 PSIRCCNALLKDLLRADAMALLW----KVREFMVGAGISPDVYTYSTLIEAYCKVREFDT 262
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
A +L G + + +N + G + + M+ G+V D Y ++
Sbjct: 263 AKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALIN 322
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
K S + AL E +L + +Y L D + G A EA K ++M G
Sbjct: 323 GLCKSRRSNEAKALLDEMSCAELKP---NVVVYANLIDGFMREGNADEAFKMIKEMVAAG 379
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV---- 345
+ + Y +L+ + ++ A L K+ M+RD + I EG
Sbjct: 380 VQPNKITYDNLVRGLCKMGQMDRASLLLKQ-----MVRDSHRPDTITYNLIIEGHFRHHS 434
Query: 346 -EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+ ++ M+NA + + +++G + A + E++ ++G P YA
Sbjct: 435 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 494
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I+ YCR S A ++F +M + + Y+S++ K GR+ ++ A+M+ +G
Sbjct: 495 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 554
Query: 465 CEPNVWIYNSLMDMHGRAKN--LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
PN + Y+ L +HG KN L E+L + M + P+ V Y ++ +Y ++ + +
Sbjct: 555 LLPNEFTYSGL--IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEK 612
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ G ++D I GI++ S +E ++L ++ G+ D +Y S ++
Sbjct: 613 VSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLIS 672
Query: 583 AL 584
L
Sbjct: 673 GL 674
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 115/252 (45%)
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
R P V LV Y + G V+ +VV M++ + S A++ + KV
Sbjct: 172 RSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKV 231
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
E ++ G P TY+++I AYC++ + A+KV +EM+++G V Y+ ++A +
Sbjct: 232 REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 291
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
+G + +A M+ G P+ + Y +L++ +++ + + L EM ++ P+ V
Sbjct: 292 SGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVV 351
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y +I + R D K E G ++ +V K+ Q++ LL+ M
Sbjct: 352 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 411
Query: 567 SEGTKLDERLYH 578
+ + D Y+
Sbjct: 412 RDSHRPDTITYN 423
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 130/321 (40%), Gaps = 34/321 (10%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V ++ G V D Y ++ K D EK + E + +D Y L D
Sbjct: 651 VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC---YNALID 707
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L KSG A F + KG++ + Y SLI + ++ A L+ E G+
Sbjct: 708 GLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 767
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC--AIVNGFSKRRGYWAAVK 385
D V L G +E+ + ++E M L+ IS +V+GF KR +K
Sbjct: 768 DAFVYSVLTTGCSSAGDLEQAMFLIEEMF---LRGHASISSFNNLVDGFCKRGKMQETLK 824
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS------ 439
+ ++ +G +P +T +II+ S+ +F+E+QQK + +SS
Sbjct: 825 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 884
Query: 440 ------------MVAMYGKTGRIRDAMWL----VAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M+ + K G + A+ L VAK GC + I ++L R
Sbjct: 885 NQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLC----RKG 940
Query: 484 NLRQVEKLWKEMERRKVTPDK 504
L + L KEM++R + P +
Sbjct: 941 KLSEALNLLKEMDKRGICPSE 961
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS- 438
YW++ ++ P +A + + C +L++ A + I+M + VV S
Sbjct: 109 YWSSPQLAPS------APAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLASI 162
Query: 439 ----------------SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
+V Y K+GR++DA +V M+ +G P++ N+L+ RA
Sbjct: 163 HRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRA 222
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
+ + K+ + M ++PD +Y+T+I AY + REFD K E R G ++
Sbjct: 223 DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTY 282
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+++ + +EE +DM+ G D Y + +N L
Sbjct: 283 NVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGL 324
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 98/240 (40%), Gaps = 25/240 (10%)
Query: 139 LSEDFKIYN------VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSA 192
+S F +YN + PDA S L C A + A L++ G ++ +FN+
Sbjct: 750 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNL 809
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G+ K T+ + + G+V ++ I+ + G +V +F+E + +
Sbjct: 810 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTS 869
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEAL-KFFRDMKEKGILEDP----------------S 295
+S + H + D + + + + RD ++G L+ S
Sbjct: 870 ESA--ARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCS 927
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
Y +++ + ++ A L KE +++G+ CL L+ G +++ V+++M
Sbjct: 928 SYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNM 987
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 197/432 (45%), Gaps = 5/432 (1%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYST 205
N+LP+ L+ +A + IA L + + G E +S + +
Sbjct: 292 NILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEA 351
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+++ M S G++ D Y +M+ ++K G + E + S+ F Y +L
Sbjct: 352 DELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK---SSGFDVVAYNVL 408
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ L K G+ +E+ F M++ G+ D + + ++I ++ + A +L E + G+
Sbjct: 409 INGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGL 467
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ C LV G +EKT+D++ M + A+++ SK R +
Sbjct: 468 KPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILH 527
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+++QL+ G TY ++I+ +CR+ + +A VF +M KG ++ Y++++ Y
Sbjct: 528 MHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYC 587
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+ ++ A + ++M +G PNV YN L+ A+ +++ L +M+ R + P+
Sbjct: 588 ISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNAT 647
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y ++S + + CVK Y E G V +++ F+K ++ + +L+Q+M
Sbjct: 648 TYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEM 707
Query: 566 KSEGTKLDERLY 577
+ G + Y
Sbjct: 708 QVRGIPPNSSTY 719
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 181/400 (45%), Gaps = 3/400 (0%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
FN + GY + + + E MK+ G D Y +M + KIGD L E
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
L+ + Y L D+ KS +AL + +M K ++ D Y ++
Sbjct: 80 LVNLEPNVIT---YTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSG 136
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+V+ A+ +F+E EE G++ + L+ +EG V + + M + +
Sbjct: 137 KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
A+++G K A +++ L+ + +P VTY+++I+ +C++ +K E + EM++K
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
V+ YSS+V Y K G + +AM ++ KM + PNV++Y +L+D + +A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
L+KEM+ R + + + ++ R+ + + + + G + DR M+
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
F K + + + Q+M + + D Y+ +N L G
Sbjct: 377 FFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG 416
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/476 (20%), Positives = 207/476 (43%), Gaps = 17/476 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T ++ L +S K + S+ + + V+P+ + + L+ S FK N +
Sbjct: 120 PDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSL-----FKEGN-V 173
Query: 175 LQVFITDGEIAL-------LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
+ F+ G + + + + + M G K M + +++ + +V + Y +
Sbjct: 174 AEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSAL 233
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
++ + K+GD K L E + + + +Y + D K G EA+ R M +
Sbjct: 234 IDGHCKLGDVNKGELLLQEMEEKHIFPNVI---VYSSIVDGYTKKGLLNEAMDVMRKMVQ 290
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
+ IL + +Y +LI + + +A +LFKE + +G+ + V V G +E+
Sbjct: 291 RNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEE 350
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
++ + M + L ++++GF K A + +++ + V Y +IN
Sbjct: 351 ADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLIN 410
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
++ Y ++E M+Q G +++M+ Y K G + +A+ L+ +MK+ G +P
Sbjct: 411 GLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKP 469
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
N N L+ A + + L +M P ++ V+ A +++R D+ + +
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMH 529
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++ G +D + ++ F +L I + +DM +G D Y++ ++
Sbjct: 530 DQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHG 585
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 93/197 (47%)
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ +I+ YCR S+A ++ M+ +G +V Y++++ + K G + A L+ ++
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
EPNV Y +L+D + +++ L ++ EM + + PD V+YT +++ ++ + +
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ E G V +R ++ K + E L M G D +Y + M
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 582 NALRDAGLQMQAQWLQQ 598
+ L AG+ A+ + Q
Sbjct: 200 DGLFKAGMANNAEDMFQ 216
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 84/172 (48%)
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
Q + V ++ ++ Y + G I A+ L+ MK +G P++ YN+LM+ + +L
Sbjct: 9 QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+KL E+ + P+ ++YTT+I AY +++ + + Y+E + V D +
Sbjct: 69 FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQ 597
+ K ++EE + ++M+ G + Y + +++L G +A LQ
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQ 180
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 117/523 (22%), Positives = 215/523 (41%), Gaps = 76/523 (14%)
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA-------------------NT 173
W+ I SL E K + PDA+T + L+ C R + A N
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNA 319
Query: 174 LLQVF------------ITDGEI-----ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
LL V+ + + E+ +++ +NS + Y + M + + +M G
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
D Y ++ + + G E +F E R P + + G G+
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMNIFEEM--RNAGCKP-NICTFNAFIKMYGNRGKFV 436
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+ +K F ++ G+ D + +L+ F +FKE + G + + E L+
Sbjct: 437 DMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGC 395
Y G E+ + V M +A + D + V R G W + KV ++ C
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDAGV-TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 396 IPGQVTYASIINAYC-----------------------------------RIALYSKAEK 420
P ++TY S+++AY + L +AE+
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
F E++++GF + +SMV++YG+ + A ++ MK +G P++ YNSLM MH
Sbjct: 616 AFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHS 675
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
R+ + + E++ +E+ + + PD +SY TVI AY R + ++E R +G V D
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVI 735
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+G ++ S EE + +++ M G + ++ Y+S ++
Sbjct: 736 TYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 7/334 (2%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
I+ LGK GR A F ++E G D Y SLI +FA+ + A +FK+ EE+
Sbjct: 178 IVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEE 237
Query: 324 GMLRDPEVCLKLVLMYIEEGLV---EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
G P + V++ + + K +VE MK+ + ++ + +
Sbjct: 238 GC--KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLH 295
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A +V+E++ + G +VTY ++++ Y + +A KV EM+ GF +V Y+S+
Sbjct: 296 QEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSL 355
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
++ Y + G + +AM L +M KG +P+V+ Y +L+ RA + +++EM
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGC 415
Query: 501 TPDKVSYTTVISAY-NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
P+ ++ I Y NR + DM +K ++E + G D ++ VF + E+
Sbjct: 416 KPNICTFNAFIKMYGNRGKFVDM-MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ ++MK G + +++ ++A G QA
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 182/434 (41%), Gaps = 39/434 (8%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
LLAF +G + K + + K K +LD+ ++ K G A LF
Sbjct: 138 LLAFLKGLGFHKKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLF- 196
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ D + Y L + SGR EA+ F+ M+E+G Y ++ F
Sbjct: 197 --NGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFG 254
Query: 306 SI-TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ T L ++ + G+ D L+ L ++ V E MK A
Sbjct: 255 KMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDK 314
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
A+++ + K A+KV ++ G P VTY S+I+AY R + +A ++ +
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 374
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG-RAK 483
M +KG V Y+++++ + + G++ AM + +M+ GC+PN+ +N+ + M+G R K
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 484 NL----------------------------------RQVEKLWKEMERRKVTPDKVSYTT 509
+ +V ++KEM+R P++ ++ T
Sbjct: 435 FVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ISAY+R F+ + Y G D + ++ ++ E+ K+L +M+
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 570 TKLDERLYHSAMNA 583
K +E Y S ++A
Sbjct: 555 CKPNELTYCSLLHA 568
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 177/411 (43%), Gaps = 10/411 (2%)
Query: 114 RPEKSTLKLL--IRYLVQSKKWDSIVSLSEDF---KIYNVLPDAHTCSRLVASCVRARKF 168
+PE ++ +LL ++ L KK+D + + F K Y + D + +++ + +
Sbjct: 130 KPESTSSELLAFLKGLGFHKKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRV 189
Query: 169 KIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
A L DG + + ++ S + + Y + V++KM+ G Y I
Sbjct: 190 SSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVI 249
Query: 228 MEAYYKIGDS-EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
+ + K+G K+ +L + KS D + Y L + EA + F +MK
Sbjct: 250 LNVFGKMGTPWNKITSLVEKMKS---DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK 306
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
G D Y +L+ + K A ++ E E G L+ Y +G+++
Sbjct: 307 AAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLD 366
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ +++ M K +++GF + +A+ ++E++ + GC P T+ + I
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFI 426
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
Y + K+F E+ G +V +++++A++G+ G + + +MK G
Sbjct: 427 KMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
P +N+L+ + R + Q +++ M VTPD +Y TV++A R
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/470 (20%), Positives = 200/470 (42%), Gaps = 45/470 (9%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+EL + PD + + L G + + E A + + E + +P T I
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKV-ESAMNIFEEMRNA-GCKPNICTFNAFI 426
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
+ K+ ++ + ++ + + PD T NTLL VF +G
Sbjct: 427 KMYGNRGKFVDMMKIFDEINVCGLSPDIVTW----------------NTLLAVFGQNG-- 468
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+S + G V+++MK AG V + + ++ AY + G E+ ++
Sbjct: 469 ----MDSEVSG------------VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 245 LECKSRKLDS--TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
R LD+ TP Y + +L + G ++ K +M++ + Y SL+
Sbjct: 513 ----RRMLDAGVTP-DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLK-LVLMYIEEGLVEKTLDVVESMKNAKLK 361
++A+ E+ L L +E G++ V LK LVL+ + L+ + +K
Sbjct: 568 AYANGKEIGLMHSLAEEVY-SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFS 626
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
++V+ + +R+ A +V + + +G P TY S++ + R A + K+E++
Sbjct: 627 PDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI 686
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
E+ KG +++Y++++ Y + R+RDA + ++M+ G P+V YN+ + +
Sbjct: 687 LREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAA 746
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+ + + M + P++ +Y +++ Y + D F + R
Sbjct: 747 DSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 106/215 (49%), Gaps = 7/215 (3%)
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
K Y+ ++ I A +I+ + S A +F +Q+ GF V +Y+S+++ +
Sbjct: 165 KDYQSMLDNSVI------AIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAF 218
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR-AKNLRQVEKLWKEMERRKVTPD 503
+GR R+A+ + KM+ +GC+P + YN ++++ G+ ++ L ++M+ + PD
Sbjct: 219 ANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPD 278
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+Y T+I+ R + + E + G D+ ++ V+ K + +E +K+L
Sbjct: 279 AYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLN 338
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+M+ G Y+S ++A G+ +A L+
Sbjct: 339 EMELNGFSPSIVTYNSLISAYARDGMLDEAMELKN 373
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 179/375 (47%), Gaps = 3/375 (0%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
+M GI + Y ++ AY KI D E V + + ++D ++ Y +L + G
Sbjct: 240 EMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEML---RLMEMDKVVYNAATYTLLIEWYG 296
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
SG+ EA K F M E+G+ D ++ S+I + +K A LF E E+G++ +
Sbjct: 297 SSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAH 356
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
L+ G ++ +V M++ L ++ I ++NG+ K+ A+++ + +
Sbjct: 357 TYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVM 416
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+G TY +I C++ + +A++ M +KG D V+++ M+ ++ K G +
Sbjct: 417 EKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNL 476
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
+A + MK KG +PNV YN+L+D + + L++ +L EME +T D +YTT+
Sbjct: 477 VEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTL 536
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
+ + + + NE G I ++ SK + EE +L +M + G
Sbjct: 537 VHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGL 596
Query: 571 KLDERLYHSAMNALR 585
D+R+Y S + L
Sbjct: 597 TPDDRVYTSLVANLH 611
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 99/501 (19%), Positives = 201/501 (40%), Gaps = 62/501 (12%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI--ALLAFNSAMGGYNKLH------- 200
PD L++ +ARKF + +L + D + ++ F S + N+ H
Sbjct: 89 PDLRAHVILISRLFKARKFVVMKNVLTCYAMDKNLRCSVSDFVSLID--NRFHEPKFVEK 146
Query: 201 -------------MYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
M+ V++ M G+ +D + A + F +
Sbjct: 147 LCDMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKM 206
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
K+D T +S I+ D L K GR A +M KGI + Y +L+ ++ I
Sbjct: 207 VEFKVDVTVYSM---TIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKI 263
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+ + E+ + E ++ + L+ Y G + + V E M ++ +
Sbjct: 264 MDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVF 323
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+I++ K A ++++L +G + TY ++I+ C AE + EMQ
Sbjct: 324 TSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQS 383
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS------------- 474
+G D +V +++++ Y K G I +A+ + M+ KG E +++ YN+
Sbjct: 384 QGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEE 443
Query: 475 ----------------------LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
++D+H + NL + E+++++M+++ P+ V+Y T+I
Sbjct: 444 AKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLID 503
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
Y++ + + +E G D +V ++EE + LL ++ +G +
Sbjct: 504 GYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAI 563
Query: 573 DERLYHSAMNALRDAGLQMQA 593
Y + ++ L G +A
Sbjct: 564 SIVTYTAIISGLSKEGRSEEA 584
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 151/362 (41%), Gaps = 52/362 (14%)
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICS---FASITEVKLAEELFKEAEEKGMLRDPE 330
R F+A KF + K +L ++ +L CS F S+ + + E F E +
Sbjct: 100 RLFKARKF---VVMKNVLTCYAMDKNLRCSVSDFVSLIDNRFHEPKFVE----------K 146
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD--CISC-------------------- 368
+C L +Y++ + E+ V + M + LKI D CI C
Sbjct: 147 LCDMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKM 206
Query: 369 -------------AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+++G K+ A + ++ +G P VTY +++NAY +I +
Sbjct: 207 VEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDF 266
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
++ M+ Y+ ++ YG +G+I +A + KM +G E ++ ++ S+
Sbjct: 267 EGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSI 326
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ + N+++ L+ E+ R + + +Y +I + + D NE + G
Sbjct: 327 ISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGL 386
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ- 594
++ I ++ + K I+E +++ M+ +G + D Y++ L +A+
Sbjct: 387 DMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKR 446
Query: 595 WL 596
WL
Sbjct: 447 WL 448
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 8/272 (2%)
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+L ++ ++ +AHT L+ + + A L+ + G ++ L+ FN+ + GY
Sbjct: 341 ALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGY 400
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K M + + + M+ G D Y I K+ E+ + +D
Sbjct: 401 CKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNA 460
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAE 314
S + I+ D K G EA + F+DMK+KG E P++ Y +LI ++ ++K A
Sbjct: 461 VS---FTIMIDIHCKEGNLVEAERVFQDMKKKG--EKPNVVTYNTLIDGYSKKGKLKEAY 515
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
L E E GM D LV G VE+ L ++ + L IS AI++G
Sbjct: 516 RLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGL 575
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
SK A ++Y+++++ G P Y S++
Sbjct: 576 SKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLV 607
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 179/416 (43%), Gaps = 52/416 (12%)
Query: 108 KKLPEFRPEKS--TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
KK+ EF+ + + ++ ++I L + + + L + + P+ T + LV + ++
Sbjct: 204 KKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKI 263
Query: 166 RKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTI-------LVYEKMKSAGIV 218
F+ N +L++ E+ + +N+A Y L +Y + V+EKM G+
Sbjct: 264 MDFEGVNEMLRLM----EMDKVVYNAAT--YTLLIEWYGSSGKIAEAEKVFEKMLERGVE 317
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLE--------------------CKSRKLDSTPFS 258
D + I+ K+G+ ++ ALF E C S +LD+
Sbjct: 318 ADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEML 377
Query: 259 TH------------MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+ ++ L + K G EAL+ M++KG D Y ++
Sbjct: 378 VNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCK 437
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKISD 364
+ + A+ EKG+ DP +++ I +EG + + V + MK K +
Sbjct: 438 LNRHEEAKRWLFTMVEKGV--DPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNV 495
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++G+SK+ A ++ +++ S G TY ++++ C +A + E
Sbjct: 496 VTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNE 555
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM-DMH 479
+ +KG +V Y+++++ K GR +A L +M A G P+ +Y SL+ ++H
Sbjct: 556 VCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANLH 611
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/489 (21%), Positives = 221/489 (45%), Gaps = 9/489 (1%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
TL +++ ++ ++D + ++ + + V PD T + +V + RA + A L+
Sbjct: 97 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 156
Query: 179 ITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
++ G + ++ +NS + G + M+ V+++M G+ D + ++ + ++G+
Sbjct: 157 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 216
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
E+ ++ E + R + S + L + G+ A+ + R+M+ G++ D IY
Sbjct: 217 EEALKIYKEMRHRGIKPDLVS---FSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
+I F + A + E G L D L+ +E + ++ M+
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 333
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ C +++G+ A+++++ +++Q P VTY ++I+ CR K
Sbjct: 334 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 393
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A ++ +M + V YS ++ + + G++ DA + +M KG PN+ YNS++
Sbjct: 394 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 453
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ R+ N+ + +K ++M KV+PD ++Y T+I Y + + K N
Sbjct: 454 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 513
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG-----LQMQ 592
D +++ FS ++E + + M ++G + D Y S +N AG Q+
Sbjct: 514 DVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLH 573
Query: 593 AQWLQQNFE 601
+ LQ+ E
Sbjct: 574 DEMLQRGKE 582
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/477 (21%), Positives = 213/477 (44%), Gaps = 18/477 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVL-------PDAHTCSRLVASCVRARK 167
P+ LLIR QS+K E F+ + ++ P A + + L A
Sbjct: 23 PQPRVFDLLIRTYTQSRK------PREAFEAFRLILDHRVPIPAAASNALLAALSRAGWP 76
Query: 168 FKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
A+ VF ++ E+ N + Y K + V +M+ + D + +
Sbjct: 77 HLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVM 136
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
++A ++ GD+E AL S+ L + Y + L +SG +A + F++M +
Sbjct: 137 VDARFRAGDAEAAMALVDSMVSKGLKPGIVT---YNSVLKGLCRSGMWDKAWEVFKEMDD 193
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
G+ D + LI F + E++ A +++KE +G+ D L+ ++ G ++
Sbjct: 194 FGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDH 253
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+ + M+ L I ++ GF + A++V ++++ GC+P VTY +++N
Sbjct: 254 AMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLN 313
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
C+ AE + EM+++G + +++++ Y G++ A+ L M + P
Sbjct: 314 GLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRP 373
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
++ YN+L+D R +L + LW +M R++ P+ V+Y+ +I ++ + + F
Sbjct: 374 DIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFL 433
Query: 528 NEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+E +N G++ + ++ + + + + K LQ M D Y++ ++
Sbjct: 434 DEM-INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 489
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Query: 378 RGYWA--AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
R W A Y + S T +++ YC+ + K + V EM+++ VV
Sbjct: 72 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 131
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
++ MV + G AM LV M +KG +P + YNS++ R+ + +++KEM
Sbjct: 132 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 191
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ V PD S+T +I + R E + +K Y E R G D ++G+F++ ++
Sbjct: 192 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 251
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+ + L++M+ G D +Y + AGL A ++ G
Sbjct: 252 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVG 298
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/513 (22%), Positives = 227/513 (44%), Gaps = 12/513 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P++ + + ++G+ + + E A D E + P T L I L + + +
Sbjct: 266 PNSVTYSTLINGLCNEGRVDE-ALDMLEEMIE-KGIEPTVYTYTLPITALCAIEHEEEAI 323
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
L K P+ T + L++ R K ++A L + +G + + +N+ +
Sbjct: 324 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 383
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + + ++ M+ G + ++ Y +I++ GD EK LF + L P
Sbjct: 384 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF----EKMLKMGP 439
Query: 257 FSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
T + Y L + G A + MKE G D Y L+ F+ +++ A
Sbjct: 440 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 499
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
F+E E G+ +P L+ + ++G V+ L +++ M+ + A++NG S
Sbjct: 500 YFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLS 559
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K + A K+ ++++ QG +P +TY ++I+ CR A K+F +M+++ +
Sbjct: 560 KENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
YSS++ + G+ +A +M GCEP + Y++L+ R + E+L K+M
Sbjct: 620 TYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 675
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ R PD+ Y +++ A+ + E D +K ++ G + +I ++ K Q+
Sbjct: 676 KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQV 735
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
EE L +M + DE ++ ++ L G
Sbjct: 736 EEAQALFDNMLEKEWNADEIVWTVLVDGLLKEG 768
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 179/439 (40%), Gaps = 8/439 (1%)
Query: 153 HTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEK 211
++C+ L+ + + A L + + G + +LL FN+ + +K L+ +
Sbjct: 164 YSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQ 223
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
+ + D Y ++ + + + + +F D + Y L + L
Sbjct: 224 IFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVT---YSTLINGLCN 280
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASL--ICSFASITEVKLAEELFKEAEEKGMLRDP 329
GR EAL +M EKGI +P++Y I + +I + A EL +++G +
Sbjct: 281 EGRVDEALDMLEEMIEKGI--EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 338
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
+ L+ G +E + + M L + A++N + A+K++
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 398
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ G + TY II C KA +F +M + G VV Y++++ Y G
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ +A L+ MK GCEP+ W YN L+ + L ++EM + P+ VSYT
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+I +++ + D+ + G + ++ SK ++ E K+ M +G
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578
Query: 570 TKLDERLYHSAMNALRDAG 588
+ Y + ++ L G
Sbjct: 579 LLPNVITYTTLIDGLCRNG 597
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/450 (19%), Positives = 191/450 (42%), Gaps = 10/450 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + + + + G+ + + E+A Y++ K P T LI L ++ + +
Sbjct: 336 PNVQTYTALISGLSRLGKL-EVAIGLYHKMLK-EGLVPNTVTYNALINELCVGGRFSTAL 393
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGY 196
+ + + L + T + ++ + A L + + G + ++ +N+ + GY
Sbjct: 394 KIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGY 453
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + + MK G D Y +++ + K G E + F E L+ P
Sbjct: 454 LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 513
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
S Y L D K G+ AL + M+E G + Y ++I + AE++
Sbjct: 514 VS---YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 570
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ E+G+L + L+ G + + M+ K + +++ G +
Sbjct: 571 CDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 630
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
E++ GC P TY+++++ CR + +AE++ +M+++GF
Sbjct: 631 E----GKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREI 686
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y S++ + K + A+ + ++AKG + ++ IY +L+ +A + + + L+ M
Sbjct: 687 YYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNML 746
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
++ D++ +T ++ + E D+C+K
Sbjct: 747 EKEWNADEIVWTVLVDGLLKEGELDLCMKL 776
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 153/363 (42%), Gaps = 8/363 (2%)
Query: 149 LPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTIL 207
LP T + L+ + A LL + +G E +N + G++K S
Sbjct: 440 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 499
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+++M G+ + Y +++ + K G + AL L + ++ P + Y + +
Sbjct: 500 YFQEMVECGLNPNPVSYTALIDGHSKDGKVD--IALSLLKRMEEMGCNP-NVESYNAVIN 556
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L K R EA K M E+G+L + Y +LI + A ++F + E++ L
Sbjct: 557 GLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP 616
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ L+ +EG D E M + + +V+G ++ ++ A ++
Sbjct: 617 NLYTYSSLIYGLCQEG----KADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLV 672
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + +G P + Y S++ A+C+ A K+F ++ KGF + Y +++ K
Sbjct: 673 KDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKA 732
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ +A L M K + ++ L+D + L KL ME + TP+ +Y
Sbjct: 733 GQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 792
Query: 508 TTV 510
+
Sbjct: 793 VIL 795
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 120/280 (42%)
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
E++ + E G C L++ + +VE ++ + M N+ ++ S
Sbjct: 143 EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFN 202
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++N SK+ A + Q+ P TY S+I +CR A VF M ++
Sbjct: 203 TLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKE 262
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G D V YS+++ GR+ +A+ ++ +M KG EP V+ Y + ++ +
Sbjct: 263 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 322
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+L M++R P+ +YT +IS +R + ++ + Y++ G V + ++
Sbjct: 323 IELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINE 382
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ +K+ M+ G+ + + Y+ + L G
Sbjct: 383 LCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGG 422
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 134/346 (38%), Gaps = 1/346 (0%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
FS + L L K A ++ M GI + +LI + +V+ AE +
Sbjct: 161 FSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELI 220
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ + + D L+L + ++ V + M + ++NG
Sbjct: 221 LSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCN 280
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A+ + E++I +G P TY I A C I +A ++ M+++G V
Sbjct: 281 EGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQT 340
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y+++++ + G++ A+ L KM +G PN YN+L++ K++ ME
Sbjct: 341 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME 400
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ +Y +I + + + + + G + ++ + +
Sbjct: 401 GHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN 460
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAG-LQMQAQWLQQNFE 601
+LL MK G + DE Y+ ++ G L+ + + Q+ E
Sbjct: 461 NAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE 506
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L L + GR +EA + +DMKE+G D IY SL+ + EV A ++F E
Sbjct: 652 YSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIE 711
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
KG + L+ + G VE+ + ++M + + + +V+G K
Sbjct: 712 AKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELD 771
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+K+ + S+ P TY + RI
Sbjct: 772 LCMKLLHIMESKNFTPNIQTYVILGRELSRIG 803
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 196/432 (45%), Gaps = 5/432 (1%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYST 205
N+LP+ L+ +A + IA L + + G E +S + +
Sbjct: 292 NILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEA 351
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+++ M S G++ D Y +M+ ++K G + E + S+ F Y +L
Sbjct: 352 DELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK---SSGFDVVAYNVL 408
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ L K G+ +E+ F M++ G+ D + + ++I ++ + A +L E + G+
Sbjct: 409 INGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGL 467
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ C LV G +EKT+D++ M + A+++ SK R +
Sbjct: 468 KPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILH 527
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++QL+ G TY ++I+ +CR+ + +A VF +M KG ++ Y++++ Y
Sbjct: 528 XHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYC 587
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+ ++ A + ++M +G PNV YN L+ A+ +++ L +M+ R + P+
Sbjct: 588 ISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNAT 647
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y ++S + + CVK Y E G V +++ F+K ++ + +L+Q+M
Sbjct: 648 TYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEM 707
Query: 566 KSEGTKLDERLY 577
+ G + Y
Sbjct: 708 QVRGIPPNSSTY 719
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 181/400 (45%), Gaps = 3/400 (0%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
FN + GY + + + E MK+ G D Y +M + KIGD L E
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
L+ + Y L D+ KS +AL + +M K ++ D Y ++
Sbjct: 80 LVNLEPNVIT---YTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSG 136
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+V+ A+ +F+E EE G++ + L+ +EG V + + M + +
Sbjct: 137 KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
A+++G K A +++ L+ + +P VTY+++I+ +C++ +K E + EM++K
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
V+ YSS+V Y K G + +AM ++ KM + PNV++Y +L+D + +A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
L+KEM+ R + + + ++ R+ + + + + G + DR M+
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
F K + + + Q+M + + D Y+ +N L G
Sbjct: 377 FFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG 416
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/476 (20%), Positives = 207/476 (43%), Gaps = 17/476 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T ++ L +S K + S+ + + V+P+ + + L+ S FK N +
Sbjct: 120 PDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSL-----FKEGN-V 173
Query: 175 LQVFITDGEIAL-------LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
+ F+ G + + + + + M G K M + +++ + +V + Y +
Sbjct: 174 AEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSAL 233
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
++ + K+GD K L E + + + +Y + D K G EA+ R M +
Sbjct: 234 IDGHCKLGDVNKGELLLQEMEEKHIFPNVI---VYSSIVDGYTKKGLLNEAMDVMRKMVQ 290
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
+ IL + +Y +LI + + +A +LFKE + +G+ + V V G +E+
Sbjct: 291 RNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEE 350
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
++ + M + L ++++GF K A + +++ + V Y +IN
Sbjct: 351 ADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLIN 410
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
++ Y ++E M+Q G +++M+ Y K G + +A+ L+ +MK+ G +P
Sbjct: 411 GLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKP 469
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
N N L+ A + + L +M P ++ V+ A +++R D+ + +
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXH 529
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++ G +D + ++ F +L I + +DM +G D Y++ ++
Sbjct: 530 DQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHG 585
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 93/197 (47%)
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ +I+ YCR S+A ++ M+ +G +V Y++++ + K G + A L+ ++
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
EPNV Y +L+D + +++ L ++ EM + + PD V+YT +++ ++ + +
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ E G V +R ++ K + E L M G D +Y + M
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 582 NALRDAGLQMQAQWLQQ 598
+ L AG+ A+ + Q
Sbjct: 200 DGLFKAGMANNAEDMFQ 216
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 84/172 (48%)
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
Q + V ++ ++ Y + G I A+ L+ MK +G P++ YN+LM+ + +L
Sbjct: 9 QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+KL E+ + P+ ++YTT+I AY +++ + + Y+E + V D +
Sbjct: 69 FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQ 597
+ K ++EE + ++M+ G + Y + +++L G +A LQ
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQ 180
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 217/477 (45%), Gaps = 20/477 (4%)
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
S L +++ L + K + +S+ K P A T + ++ ++ + + L
Sbjct: 161 SELSEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNE 220
Query: 178 FITDGEI--ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG 235
++G + +++ + + KL+ S + ++++MK G+ + Y +M Y+K+G
Sbjct: 221 MCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLG 280
Query: 236 DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
E+ L E + R+ T ++ Y L LGKSGR +A +++M + G D
Sbjct: 281 KVEEALNLVHEMRMRRCVPTVYT---YTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVV 337
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVE------K 347
+ +LI +K A ELF EE +L C V+ Y I + L E +
Sbjct: 338 LMNNLINILGRSDRLKEAVELF---EEMRLLN----CTPNVVTYNTIIKSLFEDKAPPSE 390
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+E MK + S +++GF K A+ + E++ +G P Y S+IN
Sbjct: 391 ASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 450
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+ + Y A ++F E+++ V Y+ M+ +GK GR +AM L +MK GC P
Sbjct: 451 SLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIP 510
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
+V+ YN+L+ RA + + L++ ME PD S+ +++ R ++ +
Sbjct: 511 DVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMF 570
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + + D ++G S+ EE KL+++M S+G + D Y S + A+
Sbjct: 571 AKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAV 627
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 171/378 (45%), Gaps = 5/378 (1%)
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+I++ ++ K ++F + K RK T + Y + L + G + + + +M
Sbjct: 165 EIVKILGRVKMVNKALSIFYQVKGRKCRPTAGT---YNSVILMLMQEGHHEKVHELYNEM 221
Query: 286 KEKG-ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
+G D Y++LI +F + A LF E +E G+ ++ L+ +Y + G
Sbjct: 222 CSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGK 281
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
VE+ L++V M+ + + ++ G K A VY+ ++ GC P V +
Sbjct: 282 VEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNN 341
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDAMWLVAKMKAK 463
+IN R +A ++F EM+ VV Y++++ +++ +A + +MK
Sbjct: 342 LINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKD 401
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
G P+ + Y+ L+D + + + L +EM+ + P +Y ++I++ +A+ ++
Sbjct: 402 GVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAA 461
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ + E + N G + +M+ F K + E + L +MK G D Y++ +
Sbjct: 462 NELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITG 521
Query: 584 LRDAGLQMQAQWLQQNFE 601
+ A + +A L + E
Sbjct: 522 MVRADMMDEAFSLFRTME 539
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 157/378 (41%), Gaps = 42/378 (11%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VP + + G+ K + ++ AY Y K +P+ + LI L +S +
Sbjct: 298 VPTVYTYTELIRGLGKSGRVED-AYGVYKNMLK-DGCKPDVVLMNNLINILGRSDRLKEA 355
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKI-ANTLLQVFITDGEI-ALLAFNSAMG 194
V L E+ ++ N P+ T + ++ S + A++ L+ DG + + ++ +
Sbjct: 356 VELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILID 415
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
G+ K + +L+ E+M G YC ++ + K E LF E K S
Sbjct: 416 GFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSS 475
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
S +Y ++ GK GR EA+ F +MK+ G + D Y +LI + A
Sbjct: 476 ---SVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAF 532
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
LF+ EE G +P++ + I+NG
Sbjct: 533 SLFRTMEENGC--NPDINSHNI---------------------------------ILNGL 557
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
++ G A++++ ++ S P V+Y +++ R L+ +A K+ EM KGF+ +
Sbjct: 558 ARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDL 617
Query: 435 VAYSSMVAMYGKTGRIRD 452
+ YSS++ GK R+
Sbjct: 618 ITYSSILEAVGKVDEDRN 635
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 158/359 (44%), Gaps = 5/359 (1%)
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFN 190
K + ++L + ++ +P +T + L+ ++ + + A + + + DG + ++ N
Sbjct: 281 KVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMN 340
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ + + + ++E+M+ + Y I+++ ++ A+ +LE
Sbjct: 341 NLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLE--RM 398
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
K D S+ Y IL D K+ R +AL +M EKG P+ Y SLI S
Sbjct: 399 KKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRY 458
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CA 369
+ A ELF+E +E V ++ + + G + + + MK I D + A
Sbjct: 459 EAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGC-IPDVYAYNA 517
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++ G + A ++ + GC P ++ I+N R +A ++F +M+
Sbjct: 518 LITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSST 577
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
V+Y++++ + G +A L+ +M +KG E ++ Y+S+++ G+ R +
Sbjct: 578 IKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGKVDEDRNM 636
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 130/297 (43%), Gaps = 8/297 (2%)
Query: 308 TEVKLAEELFKEA-EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
EV + + FK A +++ D + L+ E LV + ++ M + I
Sbjct: 103 VEVHVKIQFFKWAGKKRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSE 162
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
IV + + A+ ++ Q+ + C P TY S+I + + K +++ EM
Sbjct: 163 LSEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMC 222
Query: 427 QKGFDKC---VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+G C V YS++++ +GK R A+ L +MK G +P IY +LM ++ +
Sbjct: 223 SEG--HCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLG 280
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ + L EM R+ P +YT +I ++ + Y +G D +
Sbjct: 281 KVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMN 340
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD--AGLQMQAQWLQQ 598
++ + + +++E V+L ++M+ + Y++ + +L + A + WL++
Sbjct: 341 NLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLER 397
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 205/461 (44%), Gaps = 16/461 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPD------AHTCSRLVASCVRARKF 168
P+ LLIR QS+K E F+ + +L D A + L+A RA
Sbjct: 85 PQPQVFDLLIRTYTQSRKP------REAFEAFRLLLDHRVPVPASASNALLAVLSRAGWP 138
Query: 169 KIANTLLQ-VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
+A + V +D E+ N + Y K + V +M+ + D + +
Sbjct: 139 HLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVL 198
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
++A ++ GD + AL +R L + Y + L K R +A + FR M +
Sbjct: 199 IDARFRAGDVDAAIALVDSMANRGLKPGIVT---YNSVLKGLCKHRRFDKAKEVFRTMDQ 255
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
+ D + LI F + EVK A + +KE + + + D L+ ++ G ++
Sbjct: 256 CSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDH 315
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+ MK L I ++ GF + A++V ++++ GC+P VTY +++N
Sbjct: 316 AGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLN 375
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
C+ AEK+ EM+++G + +++++ Y + G +A+ L + + P
Sbjct: 376 GLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRP 435
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
+V YNSL+D R +L + +LW +M R++ P+ ++Y+ +I ++ + + F
Sbjct: 436 DVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFL 495
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+E G + + ++ + + +++ + LQ M+ +
Sbjct: 496 DEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQD 536
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/487 (20%), Positives = 214/487 (43%), Gaps = 18/487 (3%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
TL +++ ++ ++D ++ + + V PD T + L+ + RA A L+
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 179 ITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
G + ++ +NS + G K + V+ M + D + ++ + ++G+
Sbjct: 219 ANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEV 278
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
++ + E + R + S + L + G A + R+MK G++ D IY
Sbjct: 279 KEAVKFYKEMQHRYVTPDVVS---FSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIY 335
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVE--KTLD--- 350
+I F + A + E G CL V+ Y + GL + + LD
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGFG-------CLPDVVTYNTLLNGLCKQHRLLDAEK 388
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
++ M+ + C +++G+ ++ + A+++++ L+ Q P VTY S+I+ C
Sbjct: 389 LLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMC 448
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
R +KA +++ +M + + YS ++ + + G++ DA + +M KG PN+
Sbjct: 449 RKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIR 508
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YNS++ + R+ N+++ ++ ++M + V PD +++ T+I Y + +N
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIM 568
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
D +++ FS+ +++ ++ + M G + D Y S +N AG
Sbjct: 569 EKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNS 628
Query: 591 MQAQWLQ 597
QA L
Sbjct: 629 KQAFQLH 635
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 189/407 (46%), Gaps = 14/407 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T +LI ++ D+ ++L + + P T + ++ + R+F A
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAK-- 247
Query: 175 LQVFITDGEIALL----AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+VF T + ++ +FN +GG+ ++ + Y++M+ + D + ++
Sbjct: 248 -EVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGL 306
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
+ + G+ + A E K L P +Y ++ ++G EAL+ +M G
Sbjct: 307 FSRRGEMDHAGAYLREMKGLGL--VPDGV-IYTMVIGGFCRAGSMSEALRVRDEMVGFGC 363
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKT 348
L D Y +L+ + AE+L E EE+G+ P++C L+ Y +G E
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVT--PDLCTFTTLIHGYCRQGNFENA 421
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
L + +++ +L+ ++++G ++ A ++++ + ++ +P +TY+ +I++
Sbjct: 422 LQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDS 481
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+C A EM +KG + Y+S++ Y ++G ++ + KM+ P+
Sbjct: 482 HCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPD 541
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
+ +N+L+ + + +N+ ++ ME+ V PD V+Y +I+ ++
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFS 588
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 155/368 (42%), Gaps = 8/368 (2%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
++ ++ H+ PD F S L G+ + A Y E K L P+ ++I
Sbjct: 282 VKFYKEMQHRYVTPDVVSF-SCLIGLFSRRGEMDHAGAYLREMKGL-GLVPDGVIYTMVI 339
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
++ + + ++ + LPD T + L+ + + A LL G
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVT 399
Query: 185 A-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
L F + + GY + + + + +++ + + D Y +++ + GD K L
Sbjct: 400 PDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANEL 459
Query: 244 FLECKSRKLDSTPFSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
+ + +R++ H+ Y IL DS + G+ +A F +M +KG L + Y S+I
Sbjct: 460 WDDMHAREI----LPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIK 515
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ VK ++ ++ + + D L+ YI+E + +V M+ ++
Sbjct: 516 GYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRP 575
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
I+NGFS++ A +V++ + G P + TY S+IN + +A ++
Sbjct: 576 DAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLH 635
Query: 423 IEMQQKGF 430
EM +GF
Sbjct: 636 DEMIHRGF 643
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 150/353 (42%), Gaps = 44/353 (12%)
Query: 237 SEKVAALFLECKSRKLDSTPFS-THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
S + A E S L S+P ++ +L + +S + EA + FR + + + S
Sbjct: 64 SRRRGASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPAS 123
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV---CLKLVLMYIEEGLVEKTLDVV 352
+L+ + LA+E ++ + D EV L +++ + L D V
Sbjct: 124 ASNALLAVLSRAGWPHLAQEAYRLV----LSSDSEVNAYTLNIMVHSYCKTLEFDGADTV 179
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRG-YWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
S + D ++ ++ R G AA+ + + + ++G PG VTY S++ C+
Sbjct: 180 ISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCK 239
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ KA++VF M D+C VA P+V
Sbjct: 240 HRRFDKAKEVFRTM-----DQCSVA------------------------------PDVRS 264
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+N L+ R +++ K +KEM+ R VTPD VS++ +I ++R E D + E +
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G V D I +++G F + + E +++ +M G D Y++ +N L
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGL 377
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 122/274 (44%)
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
P+V L+ Y + + + + + ++ + S A++ S+ A + Y
Sbjct: 87 PQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYR 146
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++S T ++++YC+ + A+ V EM+++ VV ++ ++ + G
Sbjct: 147 LVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAG 206
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ A+ LV M +G +P + YNS++ + + + +++++ M++ V PD S+
Sbjct: 207 DVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFN 266
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I + R E VKFY E + D ++G+FS+ +++ L++MK
Sbjct: 267 ILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGL 326
Query: 569 GTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
G D +Y + AG +A ++ G
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVG 360
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 135/599 (22%), Positives = 245/599 (40%), Gaps = 105/599 (17%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++++ +++E K P+ T +I L ++ + D V L E + +P A+ +
Sbjct: 282 DMSWKFFHEMKS-HGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNT 340
Query: 158 LVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMK--- 213
++ A KF A LL+ G I +++A+N + K + ++E+MK
Sbjct: 341 MIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA 400
Query: 214 -----SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----------CKSRKLDS--- 254
+ I++D C + A +I D + A LF CK++KL+
Sbjct: 401 VPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACS 460
Query: 255 ----------TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
TP + + L D LGK GR +A + M + G + +Y SLI SF
Sbjct: 461 IFEGMDDKVCTPNAV-TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSF 519
Query: 305 ----------------------ASIT-------------EVKLAEELFKEAEEKGMLRDP 329
+T E + LF+E G + D
Sbjct: 520 FKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDA 579
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
L+ ++ GL +T ++ +MK + A+++GF K A ++ E+
Sbjct: 580 RSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEE 639
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ +G P VTY S+I+ +I +A +F E + G VV YSS++ +GK GR
Sbjct: 640 MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGR 699
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL------------------------ 485
I +A ++ ++ KG PNV+ +N L+D +A+ +
Sbjct: 700 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 759
Query: 486 --------RQVEK---LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
R+ K W+EM++ + P+ ++YTT+IS +A ++ F+ NG
Sbjct: 760 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANG 819
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G+ D A M+ S ++ + L ++ + +G + + ++AL A QA
Sbjct: 820 GIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 121/563 (21%), Positives = 237/563 (42%), Gaps = 48/563 (8%)
Query: 63 PTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKL 122
PT+E + + + +P+ + G+LK + A +Y+ A+K E
Sbjct: 77 PTLENSLSALGEKPLPE------LVIGVLKRLKDANTAVNYFQWAEKQTEKVHCPEAYNS 130
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-D 181
L+ + ++ ++D + + E+ + P ++ LVA+CV++RK + A ++Q
Sbjct: 131 LLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFK 190
Query: 182 GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
A A+ +G +++ ++++ +M+ G ++ + ++ + + G +
Sbjct: 191 FRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAAL 250
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
+L E KS LD+ +Y + D GK+G+ + KFF +MK G++ D Y S+I
Sbjct: 251 SLLDEMKSNSLDA---DIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMI 307
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ A ELF++ E+ + +++ Y G ++ ++E K AK
Sbjct: 308 GVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQK-AKGS 366
Query: 362 ISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
I I+ I+ K+R A++++E++ + +P TY +I+ CR + A +
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALE 425
Query: 421 VFIEMQQKGF-------------------------------DKC----VVAYSSMVAMYG 445
+ +M++ G DK V +SS++ G
Sbjct: 426 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 485
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K GR+ DA L KM G P +Y SL+ + K++KEM +PD
Sbjct: 486 KCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLT 545
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
T + +A E + + E +G + D I++ K E +L M
Sbjct: 546 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM 605
Query: 566 KSEGTKLDERLYHSAMNALRDAG 588
K +G LD Y++ ++ +G
Sbjct: 606 KEQGCVLDTHAYNAVIDGFCKSG 628
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 216/477 (45%), Gaps = 34/477 (7%)
Query: 110 LPEFRPEKSTLKLLIRYLVQ---SKKWDSIV----------SLSEDFKIYNVLPDAHTCS 156
L P +T +I VQ +K+WD+IV S D YN+L DA+
Sbjct: 160 LDSLSPNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQK 219
Query: 157 RLVASCVRARKFKIANTLLQVF-----ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEK 211
L K +T L++ T+ ALL + Y + V+ +
Sbjct: 220 SLYK--------KAESTYLELLEARCVPTEDTYALL-----LKAYCTSGLLEKAEAVFAE 266
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
M+ G + Y ++ K GD++K +F + K D ST Y +L + GK
Sbjct: 267 MRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIF---ERMKRDRCQPSTATYTMLINLYGK 323
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+ +++ ALK F +M+ + + + +L+ +FA + AEE+F++ +E G+ D
Sbjct: 324 ASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYA 383
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L+ Y G ++ M++ + +V+ + + + A V+E +
Sbjct: 384 YNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMK 443
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
G P ++ +++AY R +K E++ +M + G +SM+ +YG+ G+
Sbjct: 444 RLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFE 503
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
++ M+ ++ YN L++++GRA ++E+L++ + R + PD V++T+ I
Sbjct: 504 KMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRI 563
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
AY+R ++++ C++ + E G D A +++ S QI+E+ +++ M +
Sbjct: 564 GAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEVTTVIRTMHKD 620
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 165/328 (50%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L D+ G+ +A + ++ E + YA L+ ++ + ++ AE +F E
Sbjct: 209 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 268
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ G V + ++ G +K +++ E MK + + S ++N + K +
Sbjct: 269 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSY 328
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+KV+ ++ SQ C P T+ +++NA+ R L KAE++F ++Q+ G + V AY++++
Sbjct: 329 MALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALM 388
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y + G A + + M+ GCEP+ YN ++D +GRA + +++ M+R +T
Sbjct: 389 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGIT 448
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P S+ ++SAY+RA + C + N+ +G D + M+ ++ +L Q E++ ++
Sbjct: 449 PTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEV 508
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGL 589
L M+ D Y+ +N AG
Sbjct: 509 LTAMEKGPYPADISTYNILINIYGRAGF 536
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 110/225 (48%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++ + ++ Y A Y +L+ C+P + TYA ++ AYC L KAE VF EM++ G
Sbjct: 212 LIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYG 271
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
F V Y++ + K G + A+ + +MK C+P+ Y L++++G+A
Sbjct: 272 FPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMAL 331
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
K++ EM +K P+ ++T +++A+ R + + + + + G D ++ +
Sbjct: 332 KVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAY 391
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
S+ ++ M+ G + D Y+ ++A AGL AQ
Sbjct: 392 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 436
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/236 (18%), Positives = 97/236 (41%), Gaps = 39/236 (16%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIE----MQQKGFDKCVVAYSSMVAMYGK------ 446
P T+ IIN ++ L + + + + + + F V+ Y+ ++ YG+
Sbjct: 165 PNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKK 224
Query: 447 -----------------------------TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
+G + A + A+M+ G P+ +YN+ +D
Sbjct: 225 AESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYID 284
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ + ++ ++++ M+R + P +YT +I+ Y +A + M +K ++E R
Sbjct: 285 GLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKP 344
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ +V F++ E+ ++ + ++ G + D Y++ M A AG A
Sbjct: 345 NICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGA 400
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 194/426 (45%), Gaps = 5/426 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
PDA + LV+ RA +F+ A + + + G + AL+ +N + Y+K+ + + ++V
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242
Query: 209 Y-EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ MK GI LD Y ++ + G + A +F E K+ + + + L D
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVT---FNSLLD 299
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ R EA+ + M+ G Y SLI ++ ++ A EL +E E +GM
Sbjct: 300 VYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKP 359
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ G ++ L M + C A++ R + + V+
Sbjct: 360 DVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVF 419
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ L S G +P VT+ +++ + + L S+ VF EM++ G+ Y S+++ Y +
Sbjct: 420 DDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRC 479
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G AM + +M G P++ YN+++ R Q EKL+ EME R PD++SY
Sbjct: 480 GLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSY 539
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
++++ AY A++ D + + +V V +K++ + E K Q+++
Sbjct: 540 SSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRR 599
Query: 568 EGTKLD 573
LD
Sbjct: 600 RRCSLD 605
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 116/544 (21%), Positives = 224/544 (41%), Gaps = 70/544 (12%)
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EI 184
Y S W +V L + K + D +T + L++ C R ++ A + G E
Sbjct: 230 YSKMSVPWKEVVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEP 289
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL- 243
+ FNS + Y K + I V +KM++AG Y ++ AY K G E+ L
Sbjct: 290 DKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELK 349
Query: 244 -FLECKSRKLDSTPFSTHM------------------------------YKILCDSLGKS 272
+E + K D ++T + Y L G
Sbjct: 350 QEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVR 409
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
G+ E + F D++ G + D + +L+ F +FKE ++ G + + +
Sbjct: 410 GKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTY 469
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYEQLI 391
+ L+ Y GL ++ +++ + M A + A+++ + R G W A K++ ++
Sbjct: 470 VSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALA-RGGRWVQAEKLFAEME 528
Query: 392 SQGCIPGQVTYASIINAYC-----------------------------------RIALYS 416
+ C P +++Y+S+++AY ++ S
Sbjct: 529 DRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLS 588
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ EK F E++++ + ++MV++YGK ++ ++ MK + YNSLM
Sbjct: 589 ETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLM 648
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
M+ R + + E + E++ + PD+ SY TVI AY R + + ++E + +G
Sbjct: 649 HMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVK 708
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
D I + + EE + L++ + ++G K +ER Y+S + G ++A+
Sbjct: 709 PDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSF 768
Query: 597 QQNF 600
N
Sbjct: 769 LSNL 772
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 36/260 (13%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA--------------- 413
A+V+ FS+ + AV V+ +++ G P VTY +++ Y +++
Sbjct: 190 ALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVLVDSMKE 249
Query: 414 ---------------------LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
LY +A ++F EM+ GF+ V ++S++ +YGK R +
Sbjct: 250 DGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEE 309
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A+ ++ KM+ GC P+V YNSL+ + + L + +L +EME R + PD V+YTT+IS
Sbjct: 310 AIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLIS 369
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+R + D + Y+E NG + ++ + + E++ + D++S G
Sbjct: 370 GLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVP 429
Query: 573 DERLYHSAMNALRDAGLQMQ 592
D +++ + GL +
Sbjct: 430 DVVTWNTLLAVFGQNGLDSE 449
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 149/310 (48%), Gaps = 17/310 (5%)
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV---EKTL 349
D S Y +L+ F+ + A +F+ + G+ P + V++++ + ++ +
Sbjct: 184 DASAYTALVSEFSRAGRFRDAVAVFRRMVDGGV--QPALVTYNVVLHVYSKMSVPWKEVV 241
Query: 350 DVVESMKNAKLKI-----SDCISCAIVNGFSKRRG-YWAAVKVYEQLISQGCIPGQVTYA 403
+V+SMK +++ + ISC +RRG Y A ++++++ + G P +VT+
Sbjct: 242 VLVDSMKEDGIELDRYTYNTLISCC------RRRGLYREAAQMFDEMKAAGFEPDKVTFN 295
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
S+++ Y + + +A V +M+ G VV Y+S+++ Y K G + +A+ L +M+ +
Sbjct: 296 SLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFR 355
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
G +P+V Y +L+ R + + EM R +P+ +Y +I + +F
Sbjct: 356 GMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEM 415
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ +++ R G V D ++ VF + E+ + ++MK G + Y S +++
Sbjct: 416 MIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISS 475
Query: 584 LRDAGLQMQA 593
GL QA
Sbjct: 476 YSRCGLFDQA 485
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 205/467 (43%), Gaps = 8/467 (1%)
Query: 123 LIRYLVQSKKWDSIVS-LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
L++ L +K+ D L + PD + S L+ ++ + A LL + D
Sbjct: 134 LLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADD 193
Query: 182 GEIA----LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
G+ + ++ + + + G K M V++ M G+ ++ Y ++ Y IG
Sbjct: 194 GDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKW 253
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
++V + E + L ++Y +L D L K+GR EA F + KGI + +IY
Sbjct: 254 KEVVQMLQEMSTHGLQP---DCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIY 310
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
L+ +A+ + G+ D + + Y ++ ++++ + + + M+
Sbjct: 311 GILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQ 370
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+L + A+++ K AV + Q+I +G P ++S++ C + + K
Sbjct: 371 QRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEK 430
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
AE++F E+ +G V +++++ + GR+ +A L+ M G P+V YN+L+D
Sbjct: 431 AEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVD 490
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
H + + KL + + PDKV+Y T++ Y +AR D + E M G
Sbjct: 491 GHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTP 550
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
D ++ + + E +L M + T+++ Y+ +N L
Sbjct: 551 DVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGL 597
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 105/484 (21%), Positives = 210/484 (43%), Gaps = 20/484 (4%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV------ASCVRARK 167
RP T LI + KW +V + ++ + + PD + + L+ C AR
Sbjct: 234 RPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARN 293
Query: 168 F--KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
+ ++ +T I L + + G +++H + + M G+ D +
Sbjct: 294 IFDSVIRKGIKPNVTIYGILLHGYATE-GSLSEMHSF------LDLMVGNGVSPDHHIFN 346
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+ AY K ++ +F + + ++L + Y L D+L K GR +A+ F M
Sbjct: 347 IMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVT---YGALIDALCKLGRVDDAVLKFNQM 403
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
++G+ D +++SL+ ++ + + AEELF E ++G+ D L+ EG V
Sbjct: 404 IDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRV 463
Query: 346 EKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+ +++ M ++ D IS +V+G A K+ + ++S G P +VTY +
Sbjct: 464 MEAQRLIDLMLRVGVR-PDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNT 522
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+++ YC+ A +F EM KG VV Y++++ +TGR +A L M
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSR 582
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+ N++ YN +++ + + + K++ + + + D + +I A + + +
Sbjct: 583 TQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAM 642
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ G V D ++ K +EEL +L M+ GT + R+ ++ + L
Sbjct: 643 DLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWL 702
Query: 585 RDAG 588
G
Sbjct: 703 LHRG 706
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 162/379 (42%), Gaps = 13/379 (3%)
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALK- 280
GC+C++ + L L+ R D+ FS + K LCD+ R EA
Sbjct: 100 GCFCRMGRLKHGFA----AFGLILKTGWRVNDTVIFS-QLLKGLCDA----KRVDEATDI 150
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG-MLRDPEVCLKLVLM- 338
R M E G D Y+ L+ F + + A EL + G P V ++
Sbjct: 151 LLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVID 210
Query: 339 -YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
+ +V++ V + M + ++ ++ +++G+ + V++ +++ + G P
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQP 270
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
YA +++ C+ ++A +F + +KG V Y ++ Y G + + +
Sbjct: 271 DCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFL 330
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
M G P+ I+N + + + + + ++ +M +++++P+ V+Y +I A +
Sbjct: 331 DLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKL 390
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
D V +N+ G D + +V + + E+ +L ++ +G +LD +
Sbjct: 391 GRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFF 450
Query: 578 HSAMNALRDAGLQMQAQWL 596
++ M L G M+AQ L
Sbjct: 451 NTLMCNLCREGRVMEAQRL 469
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 216/477 (45%), Gaps = 34/477 (7%)
Query: 110 LPEFRPEKSTLKLLIRYLVQ---SKKWDSIV----------SLSEDFKIYNVLPDAHTCS 156
L P +T +I VQ +K+WD+IV S D YN+L DA+
Sbjct: 122 LDSLSPNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQK 181
Query: 157 RLVASCVRARKFKIANTLLQVF-----ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEK 211
L K +T L++ T+ ALL + Y + V+ +
Sbjct: 182 SLYK--------KAESTYLELLEARCVPTEDTYALL-----LKAYCTSGLLEKAEAVFAE 228
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
M+ G + Y ++ K GD++K +F + K D ST Y +L + GK
Sbjct: 229 MRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIF---ERMKRDRCQPSTATYTMLINLYGK 285
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+ +++ ALK F +M+ + + + +L+ +FA + AEE+F++ +E G+ D
Sbjct: 286 ASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYA 345
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L+ Y G ++ M++ + +V+ + + + A V+E +
Sbjct: 346 YNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMK 405
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
G P ++ +++AY R +K E++ +M + G +SM+ +YG+ G+
Sbjct: 406 RLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFE 465
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
++ M+ ++ YN L++++GRA ++E+L++ + R + PD V++T+ I
Sbjct: 466 KMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRI 525
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
AY+R ++++ C++ + E G D A +++ S QI+E+ +++ M +
Sbjct: 526 GAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEVTTVIRTMHKD 582
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 165/328 (50%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L D+ G+ +A + ++ E + YA L+ ++ + ++ AE +F E
Sbjct: 171 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 230
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ G V + ++ G +K +++ E MK + + S ++N + K +
Sbjct: 231 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSY 290
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+KV+ ++ SQ C P T+ +++NA+ R L KAE++F ++Q+ G + V AY++++
Sbjct: 291 MALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALM 350
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y + G A + + M+ GCEP+ YN ++D +GRA + +++ M+R +T
Sbjct: 351 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGIT 410
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P S+ ++SAY+RA + C + N+ +G D + M+ ++ +L Q E++ ++
Sbjct: 411 PTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEV 470
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGL 589
L M+ D Y+ +N AG
Sbjct: 471 LTAMEKGPYPADISTYNILINIYGRAGF 498
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 110/225 (48%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++ + ++ Y A Y +L+ C+P + TYA ++ AYC L KAE VF EM++ G
Sbjct: 174 LIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYG 233
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
F V Y++ + K G + A+ + +MK C+P+ Y L++++G+A
Sbjct: 234 FPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMAL 293
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
K++ EM +K P+ ++T +++A+ R + + + + + G D ++ +
Sbjct: 294 KVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAY 353
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
S+ ++ M+ G + D Y+ ++A AGL AQ
Sbjct: 354 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 398
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/236 (18%), Positives = 97/236 (41%), Gaps = 39/236 (16%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIE----MQQKGFDKCVVAYSSMVAMYGK------ 446
P T+ IIN ++ L + + + + + + F V+ Y+ ++ YG+
Sbjct: 127 PNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKK 186
Query: 447 -----------------------------TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
+G + A + A+M+ G P+ +YN+ +D
Sbjct: 187 AESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYID 246
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ + ++ ++++ M+R + P +YT +I+ Y +A + M +K ++E R
Sbjct: 247 GLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKP 306
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ +V F++ E+ ++ + ++ G + D Y++ M A AG A
Sbjct: 307 NICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGA 362
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 217/515 (42%), Gaps = 37/515 (7%)
Query: 110 LPE--FRPEKSTLKLLIRYLVQSK------KWDSIVSLSEDFKIYNVLPDAHTCSRLVAS 161
LPE FRP T ++ L++ K D I L F +N+ PD ++L++
Sbjct: 67 LPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISK 126
Query: 162 CVRARKFKIA-NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGI--- 217
R+ +A N L + + +G N+ + G K + L+ KMK I
Sbjct: 127 LCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPT 186
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF---STHMYKILCDSLGKSGR 274
V+ G + + +I D+ +V F + K K ++ F T MY L D L K GR
Sbjct: 187 VITFGILINHLCKFRRIDDALEV---FEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGR 243
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
EAL M+ + + LI + E+++A +LF E E + +P V
Sbjct: 244 QEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQI--EPNV--- 298
Query: 335 LVLMYIEEGL-----VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
+ L + +G+ + ++ M+ LK ++ +N F A++ ++
Sbjct: 299 ITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDE 358
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ GC P V Y ++I + A V ++++ GF V Y+ +++ + K +
Sbjct: 359 MSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNK 418
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM-ERRKVTPDKVSYT 508
+ A + +M+ G +P+ YN+L+ + N + K K+M E ++P +Y
Sbjct: 419 LDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYG 478
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVI--DRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+I AY D +K + E + + I I++ K +Q+ + LL DMK
Sbjct: 479 ALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMK 538
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
G + Y+S ALRD WL + F+
Sbjct: 539 FRGVMPNTTTYNSIFKALRD------KNWLDKAFK 567
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 196/494 (39%), Gaps = 48/494 (9%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ L LI L +S + ++ ++ + N L DA C+ L+ +AR+F N L
Sbjct: 115 PDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLL 174
Query: 175 LQ---------VFITDG------------EIAL---------------------LAFNSA 192
++ IT G + AL + +N+
Sbjct: 175 MRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTL 234
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G K+ + + KM+S + + ++ Y + G+ E LF E ++ ++
Sbjct: 235 IDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQI 294
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
+ + + L D + K R A++FFR M++KG+ + Y I +F ++ +
Sbjct: 295 EPNVITLN---TLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNK 351
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A E E + G D V L+ + G ++ VV +K A + +++
Sbjct: 352 AMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLIS 411
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM-QQKGFD 431
F K+ A + ++ G P VTY ++I+ + +I + A K +M +++G
Sbjct: 412 EFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLS 471
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMK--AKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
V Y +++ Y I +A+ + +M A PN IYN L+D + +
Sbjct: 472 PTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFAL 531
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
L +M+ R V P+ +Y ++ A D K + D I+
Sbjct: 532 SLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWL 591
Query: 550 SKLSQIEELVKLLQ 563
S + +I +L K Q
Sbjct: 592 SAVGEITKLKKFTQ 605
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 212/459 (46%), Gaps = 29/459 (6%)
Query: 130 SKKWDSIVSLSE----------DFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
+++W+ I+++ E D YN+L DA+ R ++ A +A +
Sbjct: 149 NRQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSE---AEAAYMALLEARCVP 205
Query: 180 TDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
T+ ALL A G +LH I +M+ GI + Y ++ K SEK
Sbjct: 206 TEDTYALLL--RAYCGSGQLHRAEGVI---SEMQRNGIPPTATVYNAYLDGLLKARCSEK 260
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
++ K + + +T Y ++ + GK+ + +L+ FR+MK G + Y +
Sbjct: 261 AVEVYQRMKKERCRT---NTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTA 317
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKN 357
L+ +FA + AEE+F+E ++ G +P+V LM Y GL + ++ M++
Sbjct: 318 LVNAFAREGLCEKAEEVFEEMQQAG--HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEH 375
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ +V+ F + + A +++L QG P ++ +++A+ R ++
Sbjct: 376 MGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVAR 435
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK----AKGCEPNVWIYN 473
E+V ++ + G A ++M+ YG+ GR+ D L A M+ A P+ YN
Sbjct: 436 CEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYN 495
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+++ +GRA L ++E ++ + R + D V++T+ I AY R +E+ C++ + E
Sbjct: 496 VMVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDA 555
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
G D A +++ S Q+E++ +++ M + L
Sbjct: 556 GCYPDAGTAKVLLAACSDERQVEQVKAIVRSMHKDAKTL 594
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 162/331 (48%), Gaps = 4/331 (1%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L D+ G+ + EA + + E + YA L+ ++ ++ AE + E +
Sbjct: 175 YNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQ 234
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
G+ V + ++ EK ++V + MK + + + ++N + K
Sbjct: 235 RNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQPM 294
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
++++V+ ++ S GC P TY +++NA+ R L KAE+VF EMQQ G + V AY++++
Sbjct: 295 SSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 354
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y + G + A + + M+ GCEP+ YN L+D GRA ++ E ++E++++ +
Sbjct: 355 EAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMR 414
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P S+ ++SA+ R+ C + + +G D M+ + + +++++ +L
Sbjct: 415 PTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERL 474
Query: 562 LQDM-KSEGT---KLDERLYHSAMNALRDAG 588
M + +G D Y+ +NA AG
Sbjct: 475 FAAMERGDGAIAGAPDTSTYNVMVNAYGRAG 505
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/512 (21%), Positives = 226/512 (44%), Gaps = 11/512 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + L + +D ++Q + KK P + +I + +
Sbjct: 188 PDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKAC 247
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+L + V+PD T S + + +AR A +L+ I++G E + +N + GY
Sbjct: 248 NLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGY 307
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDS 254
+ L + T ++ +M G++ D M + K G S++ A F + K K D
Sbjct: 308 SILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDL 367
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
Y +L G + L F M+ GI+ D S+Y LI ++ + A
Sbjct: 368 V-----TYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAM 422
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
+F + +E+G++ D ++ + G + +D M LK + +++ GF
Sbjct: 423 LIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGF 482
Query: 375 SKRRGYWAAVKVYEQLISQGCI-PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
A ++ +++S+G P V + SIIN+ C+ +A+ +F + G
Sbjct: 483 CMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPD 542
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V+ ++S++ YG G++ A ++ M + G EP+V Y++L+D + R + L++
Sbjct: 543 VITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFR 602
Query: 494 EMERRKVTPDKVSYTTVISA-YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
EM + V P ++Y ++ +N R K +E +G +D + GI++G +
Sbjct: 603 EMLSKGVKPTTITYGIILHGLFNDGRTVG-AKKMCHEMIESGTTMDISTCGIILGGLCRN 661
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ +E + L + + + K + + ++ ++A+
Sbjct: 662 NCDDEAIALFKKLGAMNVKFNIAIINTMIDAM 693
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 150/336 (44%), Gaps = 3/336 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAEELFKE 319
Y + SL + R+ AL M +K P++ Y ++I F EV A LF E
Sbjct: 193 YSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHE 252
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
++G++ D + + ++K V+ M + + +++G+S
Sbjct: 253 MMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQ 312
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ ++ ++ +G +P T S +++ C+ +A + F M KG +V YS
Sbjct: 313 WKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSV 372
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ Y G + D + L M+ G + +YN L+D +G+ + + ++ +M+ R
Sbjct: 373 LLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERG 432
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
V PD +Y TVI+A++R + +N+ G D + ++ F + +
Sbjct: 433 VMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAK 492
Query: 560 KLLQDMKSEG-TKLDERLYHSAMNALRDAGLQMQAQ 594
+L+ +M S G + + ++S +N+L G ++AQ
Sbjct: 493 ELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQ 528
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 150/340 (44%), Gaps = 9/340 (2%)
Query: 263 KILCDSLGKSGRAFEALK-FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
IL L + R+ +A+ M E G+ D Y++++ S + + A +L
Sbjct: 158 NILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMV 217
Query: 322 EKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRR 378
+K P V ++ + EG V K ++ M + + D ++ + ++ K R
Sbjct: 218 KKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGV-VPDVVTYSSYIDALCKAR 276
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A V Q+IS G P +VTY +I+ Y + + + +F EM ++G + +
Sbjct: 277 AMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCN 336
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE--KLWKEME 496
S ++ K G+ ++A M AKG +P++ Y+ L +HG A V+ L+ ME
Sbjct: 337 SYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVL--LHGYAAEGYVVDMLNLFNSME 394
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ D Y +I AY + D + + + + G + D G ++ FS++ ++
Sbjct: 395 GNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLA 454
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + M + G K D +Y+S + G ++A+ L
Sbjct: 455 DAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKEL 494
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 97/521 (18%), Positives = 207/521 (39%), Gaps = 41/521 (7%)
Query: 64 TIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLL 123
T + R+ + +PD +S++ + K +++E A + + A K +P+ T +L
Sbjct: 316 TAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAK--GHKPDLVTYSVL 373
Query: 124 IR------------YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
+ L S + + IV+ D +YN+L DA+ K +
Sbjct: 374 LHGYAAEGYVVDMLNLFNSMEGNGIVA---DHSVYNILIDAYG------------KRGMM 418
Query: 172 NTLLQVFITDGEIALL----AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
+ + +F E ++ + + + ++++ + + +M + G+ D+ Y +
Sbjct: 419 DEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSL 478
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
++ + G+ K L E SR + +T + + +SL K GR EA F +
Sbjct: 479 IQGFCMHGNLVKAKELISEMMSRGIPRP--NTVFFNSIINSLCKEGRVVEAQDIFDLVIH 536
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLV 345
G D + SLI + + +++ A + G+ +P+V L+ Y G +
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGI--EPDVVTYSALLDGYCRNGRI 594
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+ L + M + +K + I++G A K+ ++I G T I
Sbjct: 595 DDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGII 654
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDAMWLVAKMKAKG 464
+ CR +A +F ++ + ++M+ AMY K + +A L + A G
Sbjct: 655 LGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMY-KVRKREEANELFDSISATG 713
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
PN Y ++ + ++ + + ++ ME+ P +I E
Sbjct: 714 LVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAG 773
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+ ++ ++ + A +M+ +FS+ + E +K L M
Sbjct: 774 NYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLPAM 814
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 122/545 (22%), Positives = 234/545 (42%), Gaps = 48/545 (8%)
Query: 95 QTQELA-YDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKI-------- 145
QT E+A +N A K P F P S + ++R L ++ ++ + + E+ K+
Sbjct: 74 QTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRG 133
Query: 146 ----------------------------YNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
Y + PD + L+ V A K K+ +
Sbjct: 134 IFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSS 193
Query: 178 FITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
+ + FN + K H IL+ E+M S G+ D + IM+ Y + G+
Sbjct: 194 MVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGN 253
Query: 237 SEKVAALFLECKSRKLD-STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
+ L K + ++ P + +L + K GR +AL F ++ +G D
Sbjct: 254 LDGA----LRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQF 309
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVE 353
Y +L+ I K A E+ G+ DP++ L+ + G +E+ + +++
Sbjct: 310 TYNTLVNGLCKIGHAKHAMEVVDAMLLGGL--DPDIYTYNSLISGLCKLGEIEEAVKILD 367
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M + + AI++ K A ++ L S+G +P T+ S+I C +
Sbjct: 368 QMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSS 427
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ A +F EM+ KG Y+ ++ + ++ +A+ L+ +M+ GC NV IYN
Sbjct: 428 NHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYN 487
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+L+D + K + + E+++ EME + V+ D V+Y T+I +++ + + ++ M
Sbjct: 488 TLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIME 547
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG-LQMQ 592
G D+ ++ F K I++ ++Q M S G D Y + ++ L AG +Q+
Sbjct: 548 GLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVA 607
Query: 593 AQWLQ 597
++ L+
Sbjct: 608 SRLLR 612
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 111/521 (21%), Positives = 220/521 (42%), Gaps = 24/521 (4%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + ++ L+ +L D +L ++ + R + ST +LI+ L ++ + +
Sbjct: 166 PDTRFYNVLLN-VLVDANKLKLVESAHSSMVRR-RIRHDVSTFNILIKALCKAHQVRPAI 223
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ E+ Y + PD T + ++ + A + + + G + N + G+
Sbjct: 224 LMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGF 283
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS----EKVAALFLECKSRKL 252
K + ++ S G D Y ++ KIG + E V A+ L L
Sbjct: 284 CKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLG----GL 339
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D ++ Y L L K G EA+K M + + Y ++I S V
Sbjct: 340 DPDIYT---YNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDE 396
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV-----EKTLDVVESMKNAKLKISDCIS 367
A E+ + KG+L P+VC L+ +GL + +D+ E MK + +
Sbjct: 397 ATEIARLLTSKGIL--PDVCTFNSLI---QGLCLSSNHKSAMDLFEEMKGKGCRPDEFTY 451
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+++ R A+ + +++ GC V Y ++I+ +C+ +AE++F EM+
Sbjct: 452 NMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMEL 511
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
+G + V Y++++ K+ R+ DA L+ +M +G P+ + YNSL+ + ++++
Sbjct: 512 QGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKK 571
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+ + M PD V+Y T+IS +A + + +M G V+ ++
Sbjct: 572 AADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQ 631
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
K ++ E ++L ++M + D Y L + G
Sbjct: 632 ALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGG 672
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 192/465 (41%), Gaps = 41/465 (8%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
FRP++ T L+ L + + + + + + PD +T + L++ + + + A
Sbjct: 304 FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAV 363
Query: 173 TLL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+L Q+ D + +N+ + K + + + S GI+ D + +++
Sbjct: 364 KILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGL 423
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ + LF E K + F+ Y +L DSL S + EAL ++M+ G
Sbjct: 424 CLSSNHKSAMDLFEEMKGKGCRPDEFT---YNMLIDSLCSSRKLEEALNLLKEMELNGCA 480
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ IY +LI F ++ AEE+F E E +G+ RD + TL
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRD--------------SVTYNTL-- 524
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++G K + A ++ +Q+I +G P + TY S++ +C+
Sbjct: 525 -------------------IDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCK 565
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
KA + M G + +V Y+++++ K GR++ A L+ ++ KG
Sbjct: 566 TGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHA 625
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY-NRAREFDMCVKFYNEF 530
YN ++ + + +L++EM + PD ++Y V N V F E
Sbjct: 626 YNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEM 685
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
G + + + ++ LS + LVKL+ DM E K ER
Sbjct: 686 IERGNIPEFSSFVMLAEGLCTLSMDDTLVKLV-DMIMEKAKFSER 729
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 165/328 (50%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L D+ G+ +A + ++ E + YA L+ ++ + ++ AE +F E
Sbjct: 101 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 160
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ G V + ++ G +K +++ E MK + + S ++N + K +
Sbjct: 161 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSY 220
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+KV+ ++ SQ C P T+ +++NA+ R L KAE++F ++Q+ G + V AY++++
Sbjct: 221 MALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALM 280
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y + G A + + M+ GCEP+ YN ++D +GRA + +++ M+R +T
Sbjct: 281 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGIT 340
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P S+ ++SAY+RA + C + N+ +G D + M+ ++ +L Q E++ ++
Sbjct: 341 PTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEV 400
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGL 589
L M+ D Y+ +N AG
Sbjct: 401 LTAMEKGPYPADISTYNILINIYGRAGF 428
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 176/390 (45%), Gaps = 7/390 (1%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ +N + Y + +Y Y ++ A V Y +++AY G EK A+F
Sbjct: 98 VICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFA 157
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E + P S +Y D L K G +A++ F MK + Y LI +
Sbjct: 158 EMRKYGF---PPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYG 214
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
++ +A ++F E + P +C LV + EGL EK ++ E ++ A L+
Sbjct: 215 KASKSYMALKVFHEMRSQKC--KPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPD 272
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
A++ +S+ + A +++ + GC P + +Y +++AY R L+ A+ VF
Sbjct: 273 VYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 332
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M++ G + ++ +++ Y + G++ +V +M G +P+ ++ NS+++++GR
Sbjct: 333 VMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLG 392
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
++E++ ME+ D +Y +I+ Y RA F + + + D
Sbjct: 393 QFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWT 452
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+G +S+ Q +++ ++M G D
Sbjct: 453 SRIGAYSRRKQYNRCLEVFEEMIDAGCYPD 482
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 110/225 (48%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++ + ++ Y A Y +L+ C+P + TYA ++ AYC L KAE VF EM++ G
Sbjct: 104 LIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYG 163
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
F V Y++ + K G + A+ + +MK C+P+ Y L++++G+A
Sbjct: 164 FPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMAL 223
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
K++ EM +K P+ ++T +++A+ R + + + + + G D ++ +
Sbjct: 224 KVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAY 283
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
S+ ++ M+ G + D Y+ ++A AGL AQ
Sbjct: 284 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 328
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 101/475 (21%), Positives = 187/475 (39%), Gaps = 108/475 (22%)
Query: 110 LPEFRPEKSTLKLLIRYLVQ---SKKWDSIV----------SLSEDFKIYNVLPDAHTCS 156
L P +T +I VQ +K+WD+IV S D YN+L DA+
Sbjct: 52 LDSLSPNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQK 111
Query: 157 RLVASCVRARKFKIANTLLQVF-----ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEK 211
L K +T L++ T+ ALL + Y + V+ +
Sbjct: 112 SLYK--------KAESTYLELLEARCVPTEDTYALL-----LKAYCTSGLLEKAEAVFAE 158
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
M+ G + Y ++ K GD++K +F + K D ST Y +L + GK
Sbjct: 159 MRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIF---ERMKRDRCQPSTATYTMLINLYGK 215
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+ +++ ALK F +M+ + + + +L+ +FA + AEE+F++ +E G+ +P+V
Sbjct: 216 ASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGL--EPDV 273
Query: 332 CLKLVLM-------------------------------------YIEEGLVEKTLDVVES 354
LM Y GL E V E
Sbjct: 274 YAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEV 333
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
MK + + +++ +S+ ++ Q+ G P S++N Y R+
Sbjct: 334 MKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQ 393
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+ K E+V M++ + + Y+ ++ +YG+ G A+M
Sbjct: 394 FEKMEEVLTAMEKGPYPADISTYNILINIYGRAG-------FFARM-------------- 432
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
E+L++ + R + PD V++T+ I AY+R ++++ C++ + E
Sbjct: 433 --------------EELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEE 473
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 100/200 (50%), Gaps = 6/200 (3%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV---AYSSMVAMYGKTGRIRDA 453
P + Y +I+AY + +LY KAE ++E+ + +CV Y+ ++ Y +G + A
Sbjct: 96 PDVICYNLLIDAYGQKSLYKKAESTYLELLEA---RCVPTEDTYALLLKAYCTSGLLEKA 152
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ A+M+ G P+ +YN+ +D + + ++ ++++ M+R + P +YT +I+
Sbjct: 153 EAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINL 212
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
Y +A + M +K ++E R + +V F++ E+ ++ + ++ G + D
Sbjct: 213 YGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPD 272
Query: 574 ERLYHSAMNALRDAGLQMQA 593
Y++ M A AG A
Sbjct: 273 VYAYNALMEAYSRAGFPYGA 292
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 149/332 (44%), Gaps = 10/332 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P A +++++ G++K TQ+ A + + K+ +P +T +LI ++ K +
Sbjct: 166 PSAVVYNAYIDGLMKGGDTQK-AVEIFERMKR-DRCQPSTATYTMLINLYGKASKSYMAL 223
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ + + P+ T + LV + R + A + + G E + A+N+ M Y
Sbjct: 224 KVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAY 283
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
++ Y ++ M+ G D Y +++AY + G E A+F K +L TP
Sbjct: 284 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMK--RLGITP 341
Query: 257 -FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+HM +L + ++G+ + + M + GI D + S++ + + + + EE
Sbjct: 342 TMKSHM--LLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEE 399
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGF 374
+ E+ D L+ +Y G + ++ S+ L I D ++ + + +
Sbjct: 400 VLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNL-IPDVVTWTSRIGAY 458
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
S+R+ Y ++V+E++I GC P T +++
Sbjct: 459 SRRKQYNRCLEVFEEMIDAGCYPDGGTAKNVL 490
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/525 (21%), Positives = 229/525 (43%), Gaps = 24/525 (4%)
Query: 48 IINHRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEA 107
+ NH +A T P++ +K F D + +Y
Sbjct: 43 LFNHHHITTSACTEKPSL--------------PQKHCGFGSNTSNDISIDDALTSFYRMV 88
Query: 108 KKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARK 167
+ P RP + + + K++ S VSL ++ V + ++ + L+ R
Sbjct: 89 RMNP--RPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSH 146
Query: 168 FKIANTLL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQ 226
A +++ ++F + + FN+ + G + ++ +M +G + Y
Sbjct: 147 VDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNT 206
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRD 284
++ K G++ +F RK++ ++ Y + DSL K EA++F +
Sbjct: 207 VINGLCKNGNTIMAVRVF-----RKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSE 261
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M ++GI D Y +++ F S+ ++ A LFKE + ++ D LV +EG+
Sbjct: 262 MVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGM 321
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V + V E+M + + A+++G+ A+KV +I +GC P +Y
Sbjct: 322 VSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNI 381
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+IN YC+ ++A+++ EM +K V YS+++ + GR R+A+ L +M + G
Sbjct: 382 LINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSG 441
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
P++ Y+ L+D + +L + KL KEM R++ P+ + YT +I A + ++
Sbjct: 442 LLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAK 501
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ +++ +G D +M+ K +E + + M+ +G
Sbjct: 502 ELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDG 546
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 189/416 (45%), Gaps = 27/416 (6%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS-------GCYCQIMEAYYKIGDS 237
+++ F +G K Y S + + +M G+ + C C++ + +
Sbjct: 95 SVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVM 154
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI- 296
K+ L ++ D+ F+T L + L G+ EA+ F +M G +P++
Sbjct: 155 GKMFKLGIQP-----DAITFNT-----LINGLCNEGKIKEAVGLFNEMVWSG--HEPNVI 202
Query: 297 -YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
Y ++I +A +F++ E+ + ++ ++ LV + ++ + M
Sbjct: 203 SYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEM 262
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+ + I++GF A +++++++ + +P VT+ +++ C+ +
Sbjct: 263 VDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMV 322
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
S+A V M +KG + Y++++ Y ++ +A+ ++ M KGC PN+ YN L
Sbjct: 323 SEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNIL 382
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY---NRAREFDMCVKFYNEFRM 532
++ + ++K + + ++L EM + +TPD V+Y+T++ R RE + + E
Sbjct: 383 INGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPRE---ALNLFKEMCS 439
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+G + D I++ F K ++E +KLL++M K + LY + + AG
Sbjct: 440 SGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAG 495
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 108/225 (48%)
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+K++ Y +AV + Q+ G + +IN CR++ A V +M + G
Sbjct: 106 IAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPD 165
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ +++++ G+I++A+ L +M G EPNV YN++++ + N ++++
Sbjct: 166 AITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFR 225
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
+ME+ + P+ V+Y T+I + + R + V+F +E G D ++ F L
Sbjct: 226 KMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLG 285
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
Q+ E +L ++M D ++ ++ L G+ +A+ + +
Sbjct: 286 QLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSE 330
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/408 (19%), Positives = 171/408 (41%), Gaps = 18/408 (4%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ +++ ++G+ K+ T +A + + ++ +P T +I L + + + V
Sbjct: 199 PNVISYNTVINGLCKNGNTI-MAVRVFRKMEQ-NRGKPNVVTYNTIIDSLCKDRLVNEAV 256
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+ + PD T + ++ + A L + + + + FN + G
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY---YKIGDSEKVAALFL-ECKSRKL 252
K M V E M G ++ Y +M+ Y ++ ++ KV + + + + L
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
S Y IL + KS R EA + +M EK + D Y++L+ + +
Sbjct: 377 SS-------YNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPRE 429
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A LFKE G+L D L+ + + G +++ L +++ M ++K + + ++
Sbjct: 430 ALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIR 489
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF-- 430
G A +++ +L + G P TY +I + L +A + F +M+ GF
Sbjct: 490 GMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLP 549
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
D C +Y+ ++ + + A+ L+ +M K + + L+D+
Sbjct: 550 DSC--SYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDL 595
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/220 (18%), Positives = 90/220 (40%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+ + +++ P V + + + + YS A + +M G V + + ++
Sbjct: 80 ALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLIN 139
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ + A+ ++ KM G +P+ +N+L++ +++ L+ EM P
Sbjct: 140 CLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEP 199
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ +SY TVI+ + M V+ + + N G + ++ K + E V+ L
Sbjct: 200 NVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFL 259
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+M G D Y++ ++ G +A L + G
Sbjct: 260 SEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVG 299
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 178/367 (48%), Gaps = 8/367 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V +M+ GI + Y ++ K +EK ++ K + + +T Y ++ +
Sbjct: 36 VISEMREHGIPPSATVYNAYLDGLLKARCAEKAVEVYQRMKRERCRT---NTETYTLMIN 92
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GKS + A+K F++M+ G + Y +L+ +FA + AEE+F+E ++ G
Sbjct: 93 VYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEEMQQAG--H 150
Query: 328 DPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+P+V LM Y G + ++ M++ + +V+ + + + A
Sbjct: 151 EPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEA 210
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
V+E L QG P ++ ++ A+ R ++ E+V ++ + G +A ++M+ YG
Sbjct: 211 VFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYG 270
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+ GR+ D L+A M+ +G +V YN ++ +GRA L ++E + +ERR + D V
Sbjct: 271 RAGRLDDMERLLAAMERRGTR-DVGTYNVAVNAYGRAGYLERMEAAFASLERRGLAADVV 329
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
++T+ + AY R +E+ C++ + E G D A ++V S Q+E++ +++ M
Sbjct: 330 TWTSRMGAYARKKEYRRCLEIFEEMVDAGCYPDAGTAKVLVAACSDERQVEQVTAIVRSM 389
Query: 566 KSEGTKL 572
E L
Sbjct: 390 HKEAKTL 396
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 153/292 (52%), Gaps = 1/292 (0%)
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
YA L+ ++ + + AE + E E G+ V + ++ EK ++V + MK
Sbjct: 17 YALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKAVEVYQRMK 76
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ + + ++N + K + +A+KV++++ S GC TY +++NA+ R L
Sbjct: 77 RERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAREGLCE 136
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
KAE+VF EMQQ G + V AY++++ Y + G + A + + M+ GCEP+ YN L+
Sbjct: 137 KAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYNILV 196
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D +GRA R+ E +++ ++R+ + P S+ +++A+ R+ C + + +G
Sbjct: 197 DAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSGLA 256
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
D M+ + + +++++ +LL M+ GT+ D Y+ A+NA AG
Sbjct: 257 PDTIALNAMLNAYGRAGRLDDMERLLAAMERRGTR-DVGTYNVAVNAYGRAG 307
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 95/219 (43%), Gaps = 35/219 (15%)
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS------ 439
+Y L+ C+P + TYA ++ AYC +AE V EM++ G Y++
Sbjct: 1 MYAALLEARCVPTEDTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLL 60
Query: 440 -----------------------------MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
M+ +YGK+ + AM + +M++ GC+ N+
Sbjct: 61 KARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANIC 120
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
Y +L++ R + E++++EM++ PD +Y ++ AY+RA + ++
Sbjct: 121 TYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLM 180
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ G DRA I+V + + E + + +K +G
Sbjct: 181 QHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQG 219
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 141/334 (42%), Gaps = 8/334 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P A ++++L G+LK + E A + Y K+ R T L+I +SK+ S +
Sbjct: 47 PSATVYNAYLDGLLK-ARCAEKAVEVYQRMKR-ERCRTNTETYTLMINVYGKSKQPMSAM 104
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ ++ + + T + LV + R + A + + G E + A+N+ M Y
Sbjct: 105 KVFKEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAY 164
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
++ + ++ M+ G D Y +++AY + G + A+F K + + T
Sbjct: 165 SRAGFPQAASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPT- 223
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+HM +L + +SG + + + G+ D +++ ++ + E L
Sbjct: 224 MKSHM--LLLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERL 281
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E +G RD V Y G +E+ S++ L + + +++
Sbjct: 282 LAAMERRGT-RDVGTYNVAVNAYGRAGYLERMEAAFASLERRGLAADVVTWTSRMGAYAR 340
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
++ Y ++++E+++ GC P T A ++ A C
Sbjct: 341 KKEYRRCLEIFEEMVDAGCYPDAGT-AKVLVAAC 373
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 116/506 (22%), Positives = 222/506 (43%), Gaps = 72/506 (14%)
Query: 107 AKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFK----------IYNVLPDAHTCS 156
A+ P +PE+ L ++ ++ SIV +D + I NVL H
Sbjct: 27 ARSFPSGKPERE--HLTPDFVRRADLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVH--G 82
Query: 157 RLVASCVRA--RKFKIANTLLQVFITDGEIA-----LLAFNSAMGGYNKLHMYYSTILVY 209
+++ S V A R K+ T + F GE A + +N M Y ++
Sbjct: 83 QVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIH 142
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
E+M AGI ++ + ++ ++ + ++ F K ++ H + IL D L
Sbjct: 143 EEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKP---DLHTFLILVDCL 199
Query: 270 GKSGRAFEALKFFRDMKEKGILE-DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
K+G +A + F +M G + D +++ +++ + VK A E+F + E+ G
Sbjct: 200 CKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCG---- 255
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
+ + + T+ ++G +K A+KV +
Sbjct: 256 ----------FPPDAIAYNTM---------------------IDGLAKAGHAQEALKVLD 284
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++++ C+P +VTY ++N+ C+ +AE++F M GF V Y+S++ + K+G
Sbjct: 285 NMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSG 344
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
R+++A L +M G P+V + ++D ++ N Q K ++EM R P+ V+YT
Sbjct: 345 RMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYT 404
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVI------DRAIAGIMVGVFSKLSQIEELVKLL 562
T+I ++ + N FR+ G+I D ++ F KL +++E +LL
Sbjct: 405 TIIQGLSKIG------RVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLL 458
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAG 588
++ + + +LY S +N L D G
Sbjct: 459 DELDKCSSSPNLQLYSSLVNGLCDGG 484
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 120/566 (21%), Positives = 221/566 (39%), Gaps = 55/566 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + +LK + +E A + + + +K F P+ +I L ++ +
Sbjct: 223 PDRALHTAMVRTLLKAKRVKE-AREVFGQMEKCG-FPPDAIAYNTMIDGLAKAGHAQEAL 280
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ ++ +P T LV S +A + A L +V G + + S + G+
Sbjct: 281 KVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGF 340
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----CKSRK 251
K ++++M AG D + +++ K G+ E+ A F E CK
Sbjct: 341 AKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNV 400
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
+ Y + L K GR A + + M G D Y L+ F + +
Sbjct: 401 V--------TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLD 452
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD-VVESMKNAKLKISDCISCAI 370
A +L E ++ + ++ LV + G VEKTLD + E K A + + C+I
Sbjct: 453 EAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSI 512
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGC----------------------------------- 395
+ G K A +++++++S+GC
Sbjct: 513 IVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKV 572
Query: 396 --IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
+P VTY + C+I +A K+ E +G++ VVAY+++ G++ A
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA 632
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ L +M +G P+ Y +++ + K L K + EM + P +YT ++ A
Sbjct: 633 VSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQA 692
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRA-IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
A D + G ++ I ++ F K +++ +KL +DM S G
Sbjct: 693 LCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVP 752
Query: 573 DERLYHSAMNALRDAGLQMQAQWLQQ 598
S + L +G +AQ L Q
Sbjct: 753 TAVTSASLFDGLVRSGKTEKAQELLQ 778
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 190/496 (38%), Gaps = 88/496 (17%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELA--YDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
P++ + S +HG K + +E +D EA +RP+ T ++I L +S ++
Sbjct: 328 PNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG----YRPDVITHTVMIDGLCKSGNFEQ 383
Query: 136 IVSLSEDFKIYNVLPDAHTCSRL---------VASCVRARKFKIA-----NTLLQVFITD 181
E+ P+ T + + VA+ R K IA +++ + + D
Sbjct: 384 AAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLD 443
Query: 182 GEIALLAFNSAMGGYNKLH--------MYYSTIL---------------VYEKMKSAGIV 218
G L + A ++L YS+++ ++E+ K+A
Sbjct: 444 GFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAET 503
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKS--GR 274
LD G C I+ K G ++ +F S K D+T Y IL + L +S R
Sbjct: 504 LDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDAT-----TYNILINGLCRSRENR 558
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
A D+++ G L D Y L I EV A ++ +EA +G D
Sbjct: 559 VERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTA 618
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
L +G V++ + + + M C I+NG K + A K ++++I +G
Sbjct: 619 LCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKG 678
Query: 395 ---------------CIPGQV---------------------TYASIINAYCRIALYSKA 418
C G V Y ++I+ +C+ A
Sbjct: 679 QKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAA 738
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
K+F +M +G V +S+ ++G+ A L+ +M A G P+ + +++D
Sbjct: 739 LKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDG 798
Query: 479 HGRAKNLRQVEKLWKE 494
++ ++ KL +E
Sbjct: 799 LRKSDESGKLLKLVQE 814
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 210/486 (43%), Gaps = 20/486 (4%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
E P++ + I+ + +W+ ++ L + + PDA T + ++ C + ++K A
Sbjct: 210 EVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEA 269
Query: 172 NTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
++L G +++N A+ + + + V +M+S G+ D Y ++A
Sbjct: 270 LSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKA 329
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
G E L E R + P + H + + GK G+ +A++ R++ G+
Sbjct: 330 CGGGGQWETSVDLLDEMAGRGV--APNTIHFNSAIV-ACGKGGQWEKAVELLREVTALGL 386
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP-------EVCLKLVLMYIEEG 343
D + + S I + K A EL KE K + D E C K G
Sbjct: 387 TPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGK-------GG 439
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYEQLISQGCIPGQVTY 402
E L++ M L + IS I RG W +++ Q+ +QG P +TY
Sbjct: 440 QWEMALELRRQMPTKGL-TPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITY 498
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
S I + + KA + +M++ + Y+S +A K GR ++A+ L+ +M
Sbjct: 499 NSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPG 558
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
+G P+V Y + +D +G+ + +L ++M + +TP+ ++Y +VI A R E++
Sbjct: 559 QGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEK 618
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ E + D + + K + EE + LL++M +EG D Y SA+
Sbjct: 619 ALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIR 678
Query: 583 ALRDAG 588
A G
Sbjct: 679 ACNAEG 684
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/510 (23%), Positives = 219/510 (42%), Gaps = 14/510 (2%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQE-LAYDYYNEAKKLPEFRPEKSTLKLL 123
I L R+ PDA ++S + G K+ Q +E L+ AK L PE + +
Sbjct: 235 IGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGL---TPETISYNMA 291
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE 183
IR +S +W V + + V PD + + +C +++ + LL G
Sbjct: 292 IRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGV 351
Query: 184 IA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ FNSA+ K + + + ++ + G+ D+ + + A K G ++
Sbjct: 352 APNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALE 411
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L E +++L S Y ++ GK G+ AL+ R M KG+ P++ +S I
Sbjct: 412 LLKEMPAKRLKPDAIS---YNSAIEACGKGGQWEMALELRRQMPTKGL--TPNVISSNIA 466
Query: 303 SFASITEVKLAE--ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
A + E EL ++ +G+ + + + G EK LD++ MK +
Sbjct: 467 IRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAM 526
Query: 361 KISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
D I+ +RG W AV + ++ QG P ++Y + I+AY + + +A
Sbjct: 527 -TPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAV 585
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
++ +M KG V+ Y+S++ G+ G A+ L+ ++K P++ YN +
Sbjct: 586 ELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISAC 645
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
G+ + L +EM +TPD +SYT+ I A N E++ + N +G
Sbjct: 646 GKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTA 705
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ + K + EE V L+++M G
Sbjct: 706 TSYSLAIEACGKGGRREEAVCLVREMAQRG 735
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
AV + ++ + +P +++Y S I A R + + + EM G + Y+S++
Sbjct: 199 AVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVIT 258
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
GK G+ ++A+ ++ +M AKG P YN + GR+ ++ ++ ++ME + VTP
Sbjct: 259 GCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTP 318
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D +SY I A +++ V +E G + + K Q E+ V+LL
Sbjct: 319 DVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELL 378
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+++ + G D ++SA+ A +G +A
Sbjct: 379 REVTALGLTPDATSFNSAIAACTKSGRWKEA 409
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM-KAKGCEPNVWIYN 473
+ +A + EM++ G C +Y++ + G+ G+ A+ L+ ++ + +G PNV+ YN
Sbjct: 126 WREALGILDEMKEGGV-VCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYN 184
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
S ++ G L +EM R+V PD++SY + I A R +++ + E
Sbjct: 185 SAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSV 244
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G D ++ K Q +E + +L +M ++G + Y+ A+ A +G +A
Sbjct: 245 GLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEA 304
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 6/196 (3%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEM-QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
+Y + I R + KA ++ E+ +Q+G V Y+S + G + A+ L+ +
Sbjct: 146 SYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLRE 205
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M + P+ YNS + GR +V L +EM +TPD ++Y +VI+ + +
Sbjct: 206 MADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQ 265
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ + E G + + + + + +E V++L+ M+S+G D Y +
Sbjct: 266 WKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDA 325
Query: 580 AMNALRDAGLQMQAQW 595
A+ A G QW
Sbjct: 326 AIKACGGGG-----QW 336
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 180/390 (46%), Gaps = 5/390 (1%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+++ + G+ + Y +E Y+K D VA + + + + Y +L
Sbjct: 253 DEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK---EGVACNVVTYTLLIHGF 309
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
G+ EA + F +M+EKGI D +Y S+I VK A LF E +KG++
Sbjct: 310 SNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSA 369
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
L+ + G +E +V M+ + ++ I +++G+ + A+++
Sbjct: 370 HTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVV 429
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ +G Y SI + C++ +A+ + M ++G +++++++ +Y K G
Sbjct: 430 MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN 489
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+A + +M+ KG PN+ YN L+D + + N+++ KL E+E R + PD + T+
Sbjct: 490 FVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTS 549
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+I + DM +K ++E G V + M+ SK + EE KL +MK G
Sbjct: 550 LIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETG 609
Query: 570 TKLDERLYHSAMNALR--DAGLQMQAQWLQ 597
D+ +Y S + +L D + MQ Q Q
Sbjct: 610 LTPDDTVYSSLVGSLHSADESISMQIQGSQ 639
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 128/272 (47%)
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A E F+ E+KG D CL +L G V+ L M N ++++ +++
Sbjct: 178 ALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLD 237
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G KR K+ +++ ++G VTY + I Y + ++ M+++G
Sbjct: 238 GLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVAC 297
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
VV Y+ ++ + G+I +A L +M+ KG E +V++Y S++ + R+ N+++ L+
Sbjct: 298 NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLF 357
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
EM + + P +Y +I +A + + NE + G ++ I ++ + +
Sbjct: 358 DEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCES 417
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++E ++L M+ +G + D Y+S + L
Sbjct: 418 GMVDEALRLQVVMEKKGLESDVFAYNSIASGL 449
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 9/280 (3%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTI 206
++P AHT L+ +A + + A L+ G ++ + FN+ + GY + M +
Sbjct: 365 LIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEAL 424
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
+ M+ G+ D Y I K+ ++ L R + S + L
Sbjct: 425 RLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMS---FTTLI 481
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
D K G EA + FR+M+EKG + + Y LI ++ +K A +L E E +G++
Sbjct: 482 DIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLI 541
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D C L+ +G V+ L + + M L + A+++G SK A K+
Sbjct: 542 PDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKL 601
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
Y+++ G P Y+S++ +L+S E + +++Q
Sbjct: 602 YDEMKETGLTPDDTVYSSLVG-----SLHSADESISMQIQ 636
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 107/285 (37%), Gaps = 48/285 (16%)
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS--------IINAYCRI 412
+I +CA V+ G V V L+ C + A + Y
Sbjct: 118 EIRHLFNCAAVDD-----GLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVYADN 172
Query: 413 ALYSKAEKVFIEMQQKGF--------------------DKC-------------VVAYSS 439
++ +A + F M++KGF D C V YS
Sbjct: 173 KMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSL 232
Query: 440 MVAMYG--KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+ + G K G + L+ ++ AKG + NV YN+ ++ + + +L V ++ ME+
Sbjct: 233 TIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK 292
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
V + V+YT +I ++ + + + + E R G D + ++ + ++
Sbjct: 293 EGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKR 352
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+ L +M +G Y + ++ + AG AQ L +G
Sbjct: 353 ALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQG 397
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 202/472 (42%), Gaps = 20/472 (4%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
+IR L +K V++ K P AH + ++ + +++ + L +G
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEG 220
Query: 183 EI--ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
+ + +++ + + KL S I + +MK G+ + Y +M +K+ +
Sbjct: 221 QCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGA 280
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
LF E + + F+ Y L LGK+GR EA FF +M+ +G D + ++
Sbjct: 281 LGLFEEMRHQYCRPDVFT---YTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNM 337
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDV------V 352
I + A +LF+E E LR C+ V+ Y I + L E V
Sbjct: 338 INFLGKAGRLDDAIKLFEEMET---LR----CIPSVVTYNTIIKALFESKSRVSEISSWF 390
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
E MK + + S +++GF K A+ + E++ +G P Y S+I+A +
Sbjct: 391 ERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 450
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
Y A ++F E+++ Y+ M+ GK GR+ DA+ L +M GC PNV+ Y
Sbjct: 451 KRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAY 510
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N+LM RA L + + M+ PD SY +++A + D + +
Sbjct: 511 NALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQ 570
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ D ++G S EE KL+++M + G D Y S + A+
Sbjct: 571 SAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAI 622
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 89/218 (40%), Gaps = 36/218 (16%)
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM-- 443
+ E + + C+ + + II + SKA +F +++ + AY+SM+ M
Sbjct: 142 IQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLM 201
Query: 444 ----------------------------------YGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ K GR A+WL+ +MK G +P
Sbjct: 202 HEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTA 261
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
IY LM + + N+ L++EM + PD +YT +I +A D F++E
Sbjct: 262 KIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHE 321
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
R G D + M+ K ++++ +KL ++M++
Sbjct: 322 MRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMET 359
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 15/213 (7%)
Query: 381 WAAVKV-YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA--- 436
WAA K YE S TY ++I + Y + K+ EM + CVV
Sbjct: 108 WAARKRNYEHDTS--------TYMALIRCLEVVEQYGEMWKMIQEMVRNPV--CVVTPME 157
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
S ++ M G I A+ + ++KA+ C+P YNS++ M +V +L+ EM
Sbjct: 158 LSDIIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMS 217
Query: 497 RR-KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ PD V+Y+ +ISA+ + D + NE + NG I +++ + KL +
Sbjct: 218 NEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNV 277
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ L ++M+ + + D Y + L AG
Sbjct: 278 HGALGLFEEMRHQYCRPDVFTYTELIRGLGKAG 310
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 211/453 (46%), Gaps = 8/453 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQ-VFITDGEIALLAF--NSAMGGYNKLHMYYSTI 206
PD +++V +CV A +A +L+ + ++G AF N + G + +
Sbjct: 155 PDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDAL 214
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM-YKIL 265
V+++M G+ + Y +++ + K GD E L + + L P + Y +L
Sbjct: 215 KVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRL----RDQMLHDGPKPNVVTYNVL 270
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
L ++GR E +M +L D Y+ L E + LF E+ +KG+
Sbjct: 271 LSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGV 330
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ C L+ ++G V K V E + + L + I ++NG+ + R A
Sbjct: 331 MLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFC 390
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++EQ+ S+ P +TY ++IN C++ + +KAE + +EM++ G D V +++++ YG
Sbjct: 391 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 450
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
G++ +++ M+ KG + +V + S++ + + + + +M + V P+
Sbjct: 451 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 510
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
Y ++I AY + + + + + + +G +++ + SQI+E +L+ +
Sbjct: 511 VYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 570
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+++G + D Y++ ++A + G +A L Q
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQ 603
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 190/432 (43%), Gaps = 6/432 (1%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
H P+ ++ L G+ + + E A P+ T +L L ++ +
Sbjct: 257 HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASH--SMLPDGFTYSILFDGLTRTGE 314
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNS 191
+++SL + V+ A+TCS L+ + K A + ++ + G + + +N+
Sbjct: 315 SQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNT 374
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ GY ++ ++E+MKS I D Y ++ K+ K L +E +
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
+D S + L D+ G +G+ + DM++KGI D + S++ +F ++
Sbjct: 435 VDP---SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A + + K + + +V ++ YIE G E+ L +VE MKN+ + S ++
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLL 551
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
G + A ++ L +QG P V+Y +II+A C KA ++ EM + G
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 611
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ ++V+ GR+ D L +M K EP+ IY ++D + R +N +V L
Sbjct: 612 PTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASL 671
Query: 492 WKEMERRKVTPD 503
KEM + + D
Sbjct: 672 KKEMSEKGIAFD 683
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 187/396 (47%), Gaps = 13/396 (3%)
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
+AG D+ + ++++A GD + VA L R + P Y ++ L +SG
Sbjct: 150 AAGARPDTFAWNKVVQACVAAGDLD-VALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSG 208
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD---PE 330
+ +ALK F +M + G+ + Y ++I +++ L + ML D P
Sbjct: 209 KGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQ-----MLHDGPKPN 263
Query: 331 VCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIV-NGFSKRRGYWAAVKVY 387
V VL+ G +++T +++ M + + + D + +I+ +G ++ + ++
Sbjct: 264 VVTYNVLLSGLCRTGRMDETRALMDEMASHSM-LPDGFTYSILFDGLTRTGESQTMLSLF 322
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + +G + G T + ++N C+ +KA++VF + G V Y++++ Y +
Sbjct: 323 AESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQV 382
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
+R A + +MK++ P+ YN+L++ + + + + E L EME+ V P ++
Sbjct: 383 RDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF 442
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T+I AY A + + C ++ + G D G +V F K +I E V +L DM
Sbjct: 443 NTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIY 502
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
+ + ++Y+S ++A ++G QA L + + +
Sbjct: 503 KDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNS 538
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 167/327 (51%), Gaps = 1/327 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L +S GK + +A + + E + YA L+ ++ + + AE + E
Sbjct: 321 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMR 380
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E G+ + V + ++ EK ++V + MK + + + ++N + K +
Sbjct: 381 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPM 440
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+++KV+ ++ S GC P TY +++NA+ R L KAE+VF EMQQ G + V AY++++
Sbjct: 441 SSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 500
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y + G + A + + M+ GCEP+ YN L+D +GRA E +++E+++R ++
Sbjct: 501 EAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMS 560
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P S+ +++A+ R+ C + + +G D M+ +++ +++++ +L
Sbjct: 561 PTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERL 620
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAG 588
L M+ G D Y+ A+NA AG
Sbjct: 621 LAAMERRGDA-DVGTYNVAVNAYGRAG 646
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 206/455 (45%), Gaps = 26/455 (5%)
Query: 130 SKKWDSIVSLSE----------DFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
+KKWD I+ + E D YN+L +++ R + +A +A Q
Sbjct: 295 NKKWDLIIPVCEWILYRSSFRPDIICYNLLIESYGKKRQLN---KAESIYMALLEAQCVP 351
Query: 180 TDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
T+ ALL G LH I +M+ GI ++ Y ++ K +EK
Sbjct: 352 TEDTYALLLRAYCNAG--SLHRAEGVI---SEMREHGIPPNATVYNAYLDGLLKARCTEK 406
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
++ K + + +T + ++ + GK+ + ++K F +MK G + Y +
Sbjct: 407 AVEVYQRMKRERCRA---NTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTA 463
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKN 357
L+ +FA + AEE+F+E ++ G +P+V LM Y GL + ++ M++
Sbjct: 464 LVNAFAREGLCEKAEEVFEEMQQAG--HEPDVYAYNALMEAYSRAGLPQGASEIFSLMQH 521
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ +V+ + + + A V+E+L +G P ++ ++ A+ R ++
Sbjct: 522 MGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATR 581
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
E+V ++ + G A ++M+ Y + GR+ D L+A M+ +G + +V YN ++
Sbjct: 582 CEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLLAAMERRG-DADVGTYNVAVN 640
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+GRA + ++E + + R + D V++T + AY R +E+ CV E G
Sbjct: 641 AYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCYP 700
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
D A +++ S Q+E++ +++ M + L
Sbjct: 701 DAGTARVLLAACSDERQVEQVTAIVRSMHKKPKTL 735
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 149/337 (44%), Gaps = 14/337 (4%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+A ++++L G+LK + E A + Y K+ R T L+I ++K+ S +
Sbjct: 386 PNATVYNAYLDGLLK-ARCTEKAVEVYQRMKR-ERCRANTETFTLMINVYGKAKQPMSSM 443
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ + K P+ T + LV + R + A + + G E + A+N+ M Y
Sbjct: 444 KVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAY 503
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
++ + ++ M+ G D Y +++AY + G E A+F E K R + T
Sbjct: 504 SRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPT- 562
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+HM +L + +SG A + + + G+ D +++ ++A + E L
Sbjct: 563 MKSHM--LLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERL 620
Query: 317 FKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNG 373
E +G D +V V + Y G V + ++ + A+ +D ++ A +
Sbjct: 621 LAAMERRG---DADVGTYNVAVNAYGRAGYVGR-MEAAFAAVAARGLAADVVTWTARMGA 676
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+++R+ Y V + E+++ GC P T A ++ A C
Sbjct: 677 YARRKEYGRCVGMVEEMVDAGCYPDAGT-ARVLLAAC 712
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 191/406 (47%), Gaps = 18/406 (4%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ +++ + + KL+ S I ++++MK G+ + Y +M Y+K+G E+ L E
Sbjct: 225 VTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKE 284
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
++R+ T F+ Y L LGKSGR +A +++M + G D + +LI
Sbjct: 285 MRARRCLLTVFT---YTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGR 341
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVES------MKNA 358
++ A +LF E + +L C V+ Y I + L E + E+ MK
Sbjct: 342 SNHLRDAIKLFDEMK---LLN----CAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKD 394
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+ S +++G+ K A+ + E++ +G P Y S+IN Y A
Sbjct: 395 GIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVA 454
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
++F E+++ Y+ M+ +GK GR+ +A+ L +MK GC P+V+ YN+LM
Sbjct: 455 NELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTG 514
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
RA+ + + L++ ME TPD S+ +++ R ++ + + + + D
Sbjct: 515 MVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPD 574
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++G S+ EE KL+Q+M S+G + D Y S + A+
Sbjct: 575 VVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAV 620
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 128/252 (50%), Gaps = 2/252 (0%)
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQ 393
++LM ++EG EK ++ M + D ++ A+++ F+K +A+++++++
Sbjct: 194 IILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKEN 253
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G P Y +++ Y ++ +A + EM+ + V Y+ ++ GK+GR+ DA
Sbjct: 254 GLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDA 313
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
M GC+P+V + N+L+++ GR+ +LR KL+ EM+ P+ V+Y T+I +
Sbjct: 314 YMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKS 373
Query: 514 YNRAR-EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
A+ ++ + +G V I++ + K +++E+ + LL++M +G
Sbjct: 374 LFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPP 433
Query: 573 DERLYHSAMNAL 584
Y S +N L
Sbjct: 434 CPAAYCSLINTL 445
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/448 (20%), Positives = 179/448 (39%), Gaps = 39/448 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P A ++S + ML E ++ YNE P+ T LI + + DS +
Sbjct: 186 PTASTYNSIIL-MLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAI 244
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA----------NTLLQVF--------- 178
L ++ K + P A + L+ + K + A LL VF
Sbjct: 245 RLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGL 304
Query: 179 ----------------ITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
+ DG + ++ N+ + + + I ++++MK +
Sbjct: 305 GKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNV 364
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y I+++ ++ A+ + E K D S+ Y IL D K+ R +AL
Sbjct: 365 VTYNTIIKSLFEAKAPLSEASSWFE--RMKKDGIVPSSFTYSILIDGYCKTNRVEKALLL 422
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+M EKG P+ Y SLI + +A ELF+E +E V ++ + +
Sbjct: 423 LEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGK 482
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G + + +++ MK A++ G + A ++ + GC P +
Sbjct: 483 CGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINS 542
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ I+N R A ++F +M+ VV++++++ + G +A L+ +M
Sbjct: 543 HNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMS 602
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+KG + ++ Y+S+++ G+ + + VE
Sbjct: 603 SKGFQYDLITYSSILEAVGKVDDCKMVE 630
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 90/190 (47%), Gaps = 1/190 (0%)
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
TY ++I ++ + K +M + S +V + GK + A+ + +
Sbjct: 119 TTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRALSVFYQ 178
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM-ERRKVTPDKVSYTTVISAYNRAR 518
+K + C P YNS++ M + + +V +L+ EM PD V+Y+ +ISA+ +
Sbjct: 179 VKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLN 238
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
D ++ ++E + NG I ++G++ K+ ++EE + L+++M++ L Y
Sbjct: 239 RDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYT 298
Query: 579 SAMNALRDAG 588
+ L +G
Sbjct: 299 ELIRGLGKSG 308
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 187/390 (47%), Gaps = 8/390 (2%)
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIA 185
LV+SK + +++SLS+ + + P+ T + L+ + A ++L + G E
Sbjct: 78 LVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPD 137
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ N+ + G+ + + ++K+ + G LD Y ++ K+G++ L
Sbjct: 138 IITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLL- 196
Query: 246 ECKSRKLDS--TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
R++D + MY + D + K +A + +M K I D Y++LI
Sbjct: 197 ----RRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRG 252
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
F + ++K A +LF + + + D LV + +EG ++K +V++ M +K +
Sbjct: 253 FFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPN 312
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+V+GF K R V+ ++ QG P VTY S+++ YC + +KA+K+F
Sbjct: 313 VSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFN 372
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M Q+G V +Y+ M+ + K ++ AM L +M K P+V YNSL+D ++
Sbjct: 373 TMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSG 432
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ +L EM R P+ ++Y ++++A
Sbjct: 433 KISYAFQLVNEMHDRGQPPNIITYNSILNA 462
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/413 (20%), Positives = 175/413 (42%), Gaps = 21/413 (5%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD-------SGCYCQIMEAYYKIGDSEKVA 241
FN +G K Y++ + + ++M+ GI + C+CQ+ + K+
Sbjct: 71 FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
+ E L++ K C G+ +AL F + G D Y +LI
Sbjct: 131 KMGYEPDIITLNT------FIKGFC----LKGQIHQALNFHDKLVALGFHLDQVSYGTLI 180
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ E + A +L + + K + + + ++ ++ V D+ M ++
Sbjct: 181 NGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRIS 240
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
A++ GF A+ ++ ++I + P T+ +++ +C+ KA+ V
Sbjct: 241 PDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNV 300
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
M + V ++++V + K ++++ + A M +G +PNV Y SLMD +
Sbjct: 301 LDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 360
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
K + + +K++ M +R VT + SY +I+ + + ++ D +K + E + D
Sbjct: 361 VKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVT 420
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA----LRDAGLQ 590
++ K +I +L+ +M G + Y+S +NA L+D G+Q
Sbjct: 421 YNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQ 473
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 134/316 (42%), Gaps = 22/316 (6%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDYYNE--AKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+A +++ + GM KD + A+D Y+E AK++ P+ T LIR K
Sbjct: 207 NAVMYNTVIDGMSKDKHVND-AFDLYSEMVAKRI---SPDVVTYSALIRGFFIVGKLKDA 262
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFNSAMGG 195
+ L + N+ PD +T + LV C R K N L + I D + + FN+ + G
Sbjct: 263 IDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDG 322
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K V+ M GI + YC +M+ Y + K +F R + +
Sbjct: 323 FCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTA- 381
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ H Y I+ + K + +A+K F +M K I+ D Y SLI ++ A +
Sbjct: 382 --NVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQ 439
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L E ++G + P + + I L+ K +K+ ++ + ++ G
Sbjct: 440 LVNEMHDRG--QPPNI---ITYNSILNALLTK-------LKDQGIQPNMHTDTILIKGLC 487
Query: 376 KRRGYWAAVKVYEQLI 391
+ AA KV+E L+
Sbjct: 488 QSGKLEAARKVFEDLL 503
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 166/327 (50%), Gaps = 1/327 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L +S GK + +A + + E + YA L+ ++ + + AE + E
Sbjct: 178 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMR 237
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E G+ + V + ++ EK ++V + MK + + + ++N + K +
Sbjct: 238 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPM 297
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+++KV+ ++ S GC P TY +++NA+ R L KAE+VF EMQQ G + V AY++++
Sbjct: 298 SSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 357
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y + G + A + + M+ GCEP+ YN L+D +GRA E +++E+++R ++
Sbjct: 358 EAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMS 417
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P S+ +++A+ R+ C + + +G D M+ +++ +++++ +L
Sbjct: 418 PTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERL 477
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAG 588
M+ G D Y+ A+NA AG
Sbjct: 478 FAAMERRGDA-DVGTYNVAVNAYGRAG 503
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 203/448 (45%), Gaps = 26/448 (5%)
Query: 130 SKKWDSIVSLSE----------DFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
+KKWD I+ + E D YN+L +++ R + +A +A Q
Sbjct: 152 NKKWDLIIPVCEWILYRSSFRPDIICYNLLIESYGKKRQLN---KAESIYMALLEAQCVP 208
Query: 180 TDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
T+ ALL G LH I +M+ GI ++ Y ++ K +EK
Sbjct: 209 TEDTYALLLRAYCNAG--SLHRAEGVI---SEMREHGIPPNATVYNAYLDGLLKARCTEK 263
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
++ K + + +T + ++ + GK+ + ++K F +MK G + Y +
Sbjct: 264 AVEVYQRMKRERCRA---NTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTA 320
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKN 357
L+ +FA + AEE+F+E ++ G +P+V LM Y GL + ++ M++
Sbjct: 321 LVNAFAREGLCEKAEEVFEEMQQAG--HEPDVYAYNALMEAYSRAGLPQGASEIFSLMQH 378
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ +V+ + + + A V+E+L +G P ++ ++ A+ R ++
Sbjct: 379 MGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATR 438
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
E+V ++ + G A ++M+ Y + GR+ D L A M+ +G + +V YN ++
Sbjct: 439 CEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRG-DADVGTYNVAVN 497
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+GRA + ++E + + R + D V++T + AY R +E+ CV E G
Sbjct: 498 AYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCYP 557
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDM 565
D A +++ S Q+E++ +++ M
Sbjct: 558 DAGTARVLLAACSDERQVEQVTAIVRSM 585
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 150/337 (44%), Gaps = 14/337 (4%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+A ++++L G+LK + E A + Y K+ R T L+I ++K+ S +
Sbjct: 243 PNATVYNAYLDGLLK-ARCTEKAVEVYQRMKR-ERCRANTETFTLMINVYGKAKQPMSSM 300
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ + K P+ T + LV + R + A + + G E + A+N+ M Y
Sbjct: 301 KVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAY 360
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
++ + ++ M+ G D Y +++AY + G E A+F E K R + T
Sbjct: 361 SRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPT- 419
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+HM +L + +SG A + + + G+ D +++ ++A + E L
Sbjct: 420 MKSHM--LLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERL 477
Query: 317 FKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNG 373
F E +G D +V V + Y G V + ++ + A+ +D ++ A +
Sbjct: 478 FAAMERRG---DADVGTYNVAVNAYGRAGYVGR-MEAAFAAVAARGLAADVVTWTARMGA 533
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+++R+ Y V + E+++ GC P T A ++ A C
Sbjct: 534 YARRKEYGRCVGMVEEMVDAGCYPDAGT-ARVLLAAC 569
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 188/414 (45%), Gaps = 22/414 (5%)
Query: 169 KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
K + +L + + ++ + F + G K + I +M G V D Y +++
Sbjct: 411 KAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIIC---EMMGKGFVPDDSTYSKVI 467
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
EK +LF E K + P S + Y IL DS K+G +A K+F +M K
Sbjct: 468 GFLCDASKVEKAFSLFEEMKRNGI--VP-SVYTYTILIDSFCKAGLIQQARKWFDEMLHK 524
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G + Y +LI ++ ++ +A+ELF+ +G + L+ + + G +EK
Sbjct: 525 GCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKA 584
Query: 349 LDVVESMKNA----------KLKISDC------ISCAIVNGFSKRRGYWAAVKVYEQLIS 392
+ M+ KL ++C A+V+G K A ++ + +++
Sbjct: 585 CQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLA 644
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
GC P Q+ Y ++I+ +C+I A++VF +M ++G+ + YSS + K R+
Sbjct: 645 HGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDL 704
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
+ +++KM C PNV IY ++D + + KL +ME + P+ V+YT +I
Sbjct: 705 VLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMID 764
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+ ++ + + C++ + + G + +++ ++E KLL +MK
Sbjct: 765 GFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMK 818
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/544 (21%), Positives = 243/544 (44%), Gaps = 48/544 (8%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
V D F + + K + +E A+D +EA+ +F P+ ++ L ++ ++
Sbjct: 243 VMDRYTLSCFAYSLCKGGKCRE-AFDLIDEAE---DFVPDTVFYNRMVSGLCEASLFEEA 298
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-----EIALLAFNS 191
+ + + + +P+ T L++ C+R + +L + IT+G EI FNS
Sbjct: 299 MDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREI----FNS 354
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAG---------IVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ Y K Y +++KM G I + S C + + + EK +
Sbjct: 355 LIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYS 414
Query: 243 LFLECKS--RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
L+ K++ + F+ + LC + G+ +A K +M KG + D S Y+ +
Sbjct: 415 EMLDLGVVLNKVNVSNFA----RCLCGA----GKFDQAFKIICEMMGKGFVPDDSTYSKV 466
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
I ++V+ A LF+E + G++ L+ + + GL+++ + M +
Sbjct: 467 IGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGC 526
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ A+++ + K + A +++E ++ +GC P VTY ++I+ +C+ KA +
Sbjct: 527 TPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQ 586
Query: 421 VFIEM----QQKGFDK--------C----VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
++ M + DK C V+ Y ++V K R+++A L+ M A G
Sbjct: 587 IYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHG 646
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
CEPN +Y++++D + L+ ++++ +M R +P+ +Y++ I + D+ +
Sbjct: 647 CEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVL 706
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
K ++ N + I MV K+ + +E KL+ M+ +G + Y + ++
Sbjct: 707 KVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGF 766
Query: 585 RDAG 588
+G
Sbjct: 767 GKSG 770
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 112/541 (20%), Positives = 217/541 (40%), Gaps = 76/541 (14%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ ST +I +L + K + SL E+ K ++P +T + L+ S +A + A
Sbjct: 456 FVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQAR 515
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ G ++ + + + Y K ++E M G + Y +++ +
Sbjct: 516 KWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGH 575
Query: 232 YKIGDSEKVAALFL----ECKSRKLDSTPFSTH---------MYKILCDSLGKSGRAFEA 278
K G EK ++ + +S +D H Y L D L K+ R EA
Sbjct: 576 CKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEA 635
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG-------------- 324
+ M G + +Y ++I F I +++ A+E+F + E+G
Sbjct: 636 HELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDC 695
Query: 325 MLRDPEV--------------CLKLVLMYIE--EGL-----VEKTLDVVESMKNAKLKIS 363
+ +D + C V++Y E +GL ++ ++ M+ +
Sbjct: 696 LFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPN 755
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
A+++GF K ++++ + S+GC P +TY +IN C L +A K+
Sbjct: 756 VVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLD 815
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM+Q + K ++++ ++ G + ++ L+ ++ P +Y L+D + +A
Sbjct: 816 EMKQTYWPKHILSHRKIIE--GFSQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAG 873
Query: 484 NLRQVEKLWKEMER--RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
L L +E+ +K Y ++I + A + D ++ Y
Sbjct: 874 RLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASM----------- 922
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
I V +LS + L+K L K+D+ + A+ L D+ QM WLQ+
Sbjct: 923 --ISKNVVPELSILVHLIKGL-------IKVDK--WQEALQ-LSDSICQMDIHWLQEKAT 970
Query: 602 G 602
G
Sbjct: 971 G 971
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 125/312 (40%), Gaps = 49/312 (15%)
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
S +A +C E A +L EAE+ + D ++V E L E+ +D++
Sbjct: 250 SCFAYSLCKGGKCRE---AFDLIDEAED--FVPDTVFYNRMVSGLCEASLFEEAMDILHR 304
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIA 413
M+++ I + ++ I+ R+G K + +I++GC P + + S+I+AYC+
Sbjct: 305 MRSSSC-IPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSR 363
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
YS A K+F KM GC+P +YN
Sbjct: 364 DYSYAYKLF-----------------------------------KKMIKCGCQPGYLVYN 388
Query: 474 SLM------DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
+ + + L VEK + EM V +KV+ + A +FD K
Sbjct: 389 IFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKII 448
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
E G V D + ++G S++E+ L ++MK G Y +++ A
Sbjct: 449 CEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKA 508
Query: 588 GLQMQAQ-WLQQ 598
GL QA+ W +
Sbjct: 509 GLIQQARKWFDE 520
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 129/506 (25%), Positives = 220/506 (43%), Gaps = 61/506 (12%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + + G+ KD + E A + + E K P+ + LI S KW+
Sbjct: 300 PTLISYSIIIDGLCKDRREDE-ARELFKEMKA-QGIMPDVISYTTLIHGFCLSGKWEKAK 357
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
L + + PD T S L+ + K AN LL+V I G I ++ + + G
Sbjct: 358 CLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGL 417
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
H ++ KM+ G + + +M+ + G+ + L K+ D++P
Sbjct: 418 CMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELH---KNMLSDTSP 474
Query: 257 FSTHM------YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ + Y I+ D L K GR EA + F++MK G++ D Y SLI F +
Sbjct: 475 YGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKW 534
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
K A+ LF E + G+ D L+ M +EG V+E
Sbjct: 535 KDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEG------KVIE----------------- 571
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
A ++ E +I +GCIP VTY +++ C S+A ++F++MQ+ G
Sbjct: 572 ------------ANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGC 619
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE------PNVWIYNSLMD---MHGR 481
VV Y +++ +TG I+ A+ L KM + + P+V Y+ ++D HGR
Sbjct: 620 LPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGR 679
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
R+ L+KEM+ V P+ +SYT++I + R+ + + +NE G ++
Sbjct: 680 EDEARE---LFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVT 736
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKS 567
+M+ F K QI++ L Q M++
Sbjct: 737 YSVMIHGFCKEGQIDK--ALFQKMEA 760
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 127/544 (23%), Positives = 226/544 (41%), Gaps = 54/544 (9%)
Query: 55 QVNASTNFPTIELNRDSHHQTAV-PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEF 113
++N + + LN S + P + + G+ KD + E A + + E K
Sbjct: 95 KINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDE-ARELFKEMKA-QGM 152
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
P+ + LI +S KW+ L + + D T S L+ + K AN
Sbjct: 153 MPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANE 212
Query: 174 LLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
LL+V I G I ++ +++ + G H ++ M+ G D+ Y +M+
Sbjct: 213 LLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLC 272
Query: 233 KIGDSEKVAALFLECKSR------KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
+ G+ L E + K T S Y I+ D L K R EA + F++MK
Sbjct: 273 QTGNINTALQLHQEMLNDTGRYGIKCKPTLIS---YSIIIDGLCKDRREDEARELFKEMK 329
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
+GI+ D Y +LI F + + A+ LF E + G+ P+V VL
Sbjct: 330 AQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGI--QPDVTTSSVL--------- 378
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
++ K+ A K+ E +I +GCIP VT +++
Sbjct: 379 ------------------------IDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLV 414
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK--- 463
C SKA ++F++MQ+ G VV ++++ ++G I+ A+ L M +
Sbjct: 415 KGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSP 474
Query: 464 ---GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
C+PN Y+ ++D + + +L+KEM+ V PD +SYT++I + R+ ++
Sbjct: 475 YGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKW 534
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+NE G D +++ + K ++ E +LL+ M G + Y +
Sbjct: 535 KDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTL 594
Query: 581 MNAL 584
+ L
Sbjct: 595 VKGL 598
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 189/434 (43%), Gaps = 47/434 (10%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYST 205
+ PD T L+ + K AN LL+V + G I ++ +++ + G H
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
++ MK G D+ Y +M+ C++ K++ + H+++
Sbjct: 65 TQLFMSMKKLGCRPDAIAYGTLMKGL---------------CQTGKIN---IALHLHQ-- 104
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAEELFKEAEEK 323
+ D + GI P++ Y+ +I A ELFKE + +
Sbjct: 105 --------------EMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQ 150
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
GM+ D L+ + G EK + M + ++ S +++ K A
Sbjct: 151 GMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEA 210
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
++ E +I +GCI VTY+++I C S+A ++F+ MQ+ G +AY +++
Sbjct: 211 NELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKG 270
Query: 444 YGKTGRIRDAMWLVAKMKAKG------CEPNVWIYNSLMDMHGRAKNLRQVE--KLWKEM 495
+TG I A+ L +M C+P + Y+ ++D G K+ R+ E +L+KEM
Sbjct: 271 LCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIID--GLCKDRREDEARELFKEM 328
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + + PD +SYTT+I + + +++ +NE G D + +++ + K ++
Sbjct: 329 KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKV 388
Query: 556 EELVKLLQDMKSEG 569
E KLL+ + G
Sbjct: 389 IEANKLLEVVIQRG 402
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 122/616 (19%), Positives = 231/616 (37%), Gaps = 102/616 (16%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLK---------------------DPQTQELAYDYY 104
EL ++ Q +PD + S +HG + D T + D
Sbjct: 142 ELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDIL 201
Query: 105 N------EAKKLPEFRPEKS------TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDA 152
EA +L E ++ T LI+ L + L + PDA
Sbjct: 202 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDA 261
Query: 153 HTCSRLVASCVRARKFKIANTLLQVFITDG-------EIALLAFNSAMGGYNKLHMYYST 205
L+ + A L Q + D + L++++ + G K
Sbjct: 262 IAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 321
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
++++MK+ GI+ D Y ++ + G EK LF E + ++ +L
Sbjct: 322 RELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTS---SVL 378
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
D L K G+ EA K + ++G + D +L+ + A +LF + ++ G
Sbjct: 379 IDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGC 438
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC----ISCA--------IVNG 373
+ + C L+ + G ++ L++ ++M +SD I+C I++G
Sbjct: 439 MPNVVTCATLMKGLCQSGNIKIALELHKNM------LSDTSPYGINCKPNAISYSIIIDG 492
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
K A ++++++ + G IP ++Y S+I+ +CR + A+ +F EM G
Sbjct: 493 LCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 552
Query: 434 VVAYSSMVAMYGKTG-----------------------------------RIRDAMWLVA 458
V +S ++ M K G RI +A L
Sbjct: 553 VTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFM 612
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER------RKVTPDKVSYTTVIS 512
KM+ GC P+V Y +LM + N++ +L K+M PD +SY+ +I
Sbjct: 613 KMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIID 672
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ D + + E + G + + ++ F + ++E+ L +M +G +L
Sbjct: 673 GLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQL 732
Query: 573 DERLYHSAMNALRDAG 588
+ Y ++ G
Sbjct: 733 NAVTYSVMIHGFCKEG 748
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 152/344 (44%), Gaps = 17/344 (4%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
+L D K G+ EA + M ++G + D Y++LI + A +LF ++
Sbjct: 15 VLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKL 74
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN------AKLKISDCISCAIVNGFSKR 377
G D L+ + G + L + + M N K K + I++G K
Sbjct: 75 GCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKD 134
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
R A ++++++ +QG +P ++Y S+I+ +CR + KA+ +F EM G V
Sbjct: 135 RREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTS 194
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
S ++ + K G++ +A L+ M +GC ++ Y++L+ + + +L+ M++
Sbjct: 195 SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQK 254
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA------GIMVGVFSK 551
PD ++Y T++ + + ++ + E + G I++ K
Sbjct: 255 LGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 314
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
+ +E +L ++MK++G D Y + ++ G + +W
Sbjct: 315 DRREDEARELFKEMKAQGIMPDVISYTTLIH-----GFCLSGKW 353
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 98/236 (41%), Gaps = 41/236 (17%)
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
++ G P T +I+ +C+ +A ++ M Q+G +V YS+++ R
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMD-------------------------------- 477
I +A L MK GC P+ Y +LM
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 478 -------MHGRAKNLRQVE--KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ G K+ R+ E +L+KEM+ + + PD +SYT++I + R+ +++ +N
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
E G D + +++ + K ++ E +LL+ M G LD Y + + L
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL 236
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 129/506 (25%), Positives = 220/506 (43%), Gaps = 61/506 (12%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + + G+ KD + E A + + E K P+ + LI S KW+
Sbjct: 456 PTLISYSIIIDGLCKDRREDE-ARELFEEMKA-QGIMPDVISYTTLIHGFCLSGKWEKAK 513
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
L + + PD T S L+ + K AN LL+V I G I ++ + + G
Sbjct: 514 CLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGL 573
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
H ++ KM+ G + + +M+ + G+ + L K+ D++P
Sbjct: 574 CMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELH---KNMLSDTSP 630
Query: 257 FSTHM------YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ + Y I+ D L K GR EA + F++MK G++ D Y SLI F +
Sbjct: 631 YGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKW 690
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
K A+ LF E + G+ D L+ M +EG V+E
Sbjct: 691 KDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEG------KVIE----------------- 727
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
A ++ E +I +GCIP VTY +++ C S+A ++F++MQ+ G
Sbjct: 728 ------------ANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGC 775
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE------PNVWIYNSLMD---MHGR 481
VV Y +++ +TG I+ A+ L KM + + P+V Y+ ++D HGR
Sbjct: 776 LPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGR 835
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
R+ L+KEM+ V P+ +SYT++I + R+ + + +NE G ++
Sbjct: 836 EDEARE---LFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVT 892
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKS 567
+M+ F K QI++ L Q M++
Sbjct: 893 YSVMIHGFCKEGQIDK--ALFQKMEA 916
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 123/551 (22%), Positives = 238/551 (43%), Gaps = 60/551 (10%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
H+ + D + + + G+ + E A + KKL RP+ L++ L Q+ K
Sbjct: 263 HRGCILDIVTYSTLIKGLCMKHRISE-ATQLFMSMKKLG-CRPDAIAYGTLMKGLCQTGK 320
Query: 133 WDSIVSLSED-------FKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA 185
+ + L ++ + I + PD T S L+ + K AN LL+V I G I
Sbjct: 321 INIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCIL 380
Query: 186 -LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
++ +++ + G H ++ M+ G D+ Y +M+ + G+ L
Sbjct: 381 DIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLH 440
Query: 245 LECKSR------KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
E + K T S Y I+ D L K R EA + F +MK +GI+ D Y
Sbjct: 441 QEMLNDTGRYGIKCKPTLIS---YSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYT 497
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT---------- 348
+LI F + + A+ LF E + G+ D L+ M ++G V +
Sbjct: 498 TLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQR 557
Query: 349 ---LDVVES--------------------MKNAKLK-ISDCISCA-IVNGFSKRRGYWAA 383
LDVV +K KL + + ++CA ++ G + A
Sbjct: 558 GCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIA 617
Query: 384 VKVYEQLISQ------GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
+++++ ++S C P ++Y+ II+ C+ +A ++F EM+ G V++Y
Sbjct: 618 LELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISY 677
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+S++ + ++G+ +DA +L +M G +P+V ++ L+DM + + + +L + M +
Sbjct: 678 TSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQ 737
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
R P+ V+YTT++ + + + + G + D G ++ + I+
Sbjct: 738 RGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKT 797
Query: 558 LVKLLQDMKSE 568
++L + M S+
Sbjct: 798 ALELHKKMLSD 808
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 125/564 (22%), Positives = 224/564 (39%), Gaps = 102/564 (18%)
Query: 109 KLPEFRPEKSTLKLLIRYLVQSKKWD-SIVSLS--------EDFKIYNVLPDAHTCSRLV 159
+L P+ T +LI L K+ + + +++ D Y++ PD T S L+
Sbjct: 2 RLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLI 61
Query: 160 ASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
+ K AN LL+V I G I ++ +++ + G H ++ M+ G
Sbjct: 62 DILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCR 121
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSR------KLDSTPFSTHMYKILCDSLGKS 272
D+ Y +M+ + G+ L E + K T S Y I+ D L K
Sbjct: 122 PDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS---YSIIIDGLCKD 178
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
R EA + F++MK +G++ D Y SLI F + + A+ LF E + G+ D
Sbjct: 179 RREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTS 238
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
L+ M+ +EG V + +++E M + + ++ G + A +++ +
Sbjct: 239 GVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKK 298
Query: 393 QGCIPGQVTYASIINAYCR-----IALYSKAEKV-------------------------- 421
GC P + Y +++ C+ IAL+ E +
Sbjct: 299 LGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILC 358
Query: 422 ----FIE-------MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
IE M Q+G +V YS+++ RI +A WL M+ GC P+
Sbjct: 359 KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAI 418
Query: 471 IYNSLM-------------DMH--------------------------GRAKNLRQVE-- 489
Y +LM +H G K+ R+ E
Sbjct: 419 TYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAR 478
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+L++EM+ + + PD +SYTT+I + + +++ +NE G D + +++ +
Sbjct: 479 ELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDML 538
Query: 550 SKLSQIEELVKLLQDMKSEGTKLD 573
K ++ E KLL+ + G LD
Sbjct: 539 CKKGKVIEANKLLEVVIQRGCILD 562
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/499 (21%), Positives = 200/499 (40%), Gaps = 69/499 (13%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-------EIALLAFNSAMGGYNKLHMY 202
PDA T L+ + IA L Q + D + L++++ + G K
Sbjct: 415 PDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRE 474
Query: 203 YSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMY 262
++E+MK+ GI+ D Y ++ + G EK LF E + ++
Sbjct: 475 DEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTS--- 531
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
+L D L K G+ EA K + ++G + D +L+ + A +LF + ++
Sbjct: 532 SVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQK 591
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC----ISC--------AI 370
G + + C L+ + G ++ L++ ++M +SD I+C I
Sbjct: 592 LGCMPNVVTCATLMKGLCQSGNIKIALELHKNM------LSDTSPYGINCKPNAISYSII 645
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++G K A ++++++ + G IP ++Y S+I+ +CR + A+ +F EM G
Sbjct: 646 IDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGV 705
Query: 431 DKCVVAYSSMVAMYGKTG-----------------------------------RIRDAMW 455
V +S ++ M K G RI +A
Sbjct: 706 QPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQ 765
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER------RKVTPDKVSYTT 509
L KM+ GC P+V Y +LM + N++ +L K+M PD +SY+
Sbjct: 766 LFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSI 825
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+I + D + + E + G + + ++ F + ++E+ L +M +G
Sbjct: 826 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 885
Query: 570 TKLDERLYHSAMNALRDAG 588
+L+ Y ++ G
Sbjct: 886 VQLNAVTYSVMIHGFCKEG 904
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 154/348 (44%), Gaps = 17/348 (4%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
+L D L K G+ EA + M ++G + D Y++LI + A LF ++
Sbjct: 59 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL 118
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC--------AIVNGFS 375
G D L+ + G + L + + M N + I C I++G
Sbjct: 119 GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG--IKCKPTLISYSIIIDGLC 176
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K R A ++++++ +QG +P ++Y S+I+ +C + KA+ +F EM G V
Sbjct: 177 KDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVT 236
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
++ M+ K G++ +A L+ M +GC ++ Y++L+ + + +L+ M
Sbjct: 237 TSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSM 296
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG---GV----IDRAIAGIMVGV 548
++ PD ++Y T++ + + ++ + + E + G+ D + +++ +
Sbjct: 297 KKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDI 356
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
K ++ E +LL+ M G LD Y + + L +A WL
Sbjct: 357 LCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 404
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 122/611 (19%), Positives = 217/611 (35%), Gaps = 134/611 (21%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
EL ++ Q +PD + S +HG
Sbjct: 186 ELFKEMKAQGMMPDVISYTSLIHG------------------------------------ 209
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA 185
S KW+ L + + PD T L+ + K AN LL+V + G I
Sbjct: 210 -FCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCIL 268
Query: 186 -LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
++ +++ + G H ++ MK G D+ Y +M+ + G L
Sbjct: 269 DIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLH 328
Query: 245 LECKSRKLDSTPFSTHMYK-------ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
E + D++ + + +L D L K G+ EA + M ++G + D Y
Sbjct: 329 QEMLN---DTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTY 385
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++LI + A LF ++ G D L+ + G + L + + M N
Sbjct: 386 STLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLN 445
Query: 358 AKLKISDCISC--------AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+ I C I++G K R A +++E++ +QG +P ++Y ++I+ +
Sbjct: 446 DTGRYG--IKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGF 503
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG--------------------- 448
C + KA+ +F EM G V S ++ M K G
Sbjct: 504 CLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDV 563
Query: 449 --------------RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR-------- 486
RI A L KM+ GC PNV +LM ++ N++
Sbjct: 564 VTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKN 623
Query: 487 ---------------------------------QVEKLWKEMERRKVTPDKVSYTTVISA 513
+ +L+KEM+ V PD +SYT++I
Sbjct: 624 MLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 683
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ R+ ++ +NE G D +++ + K ++ E +LL+ M G +
Sbjct: 684 FCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPN 743
Query: 574 ERLYHSAMNAL 584
Y + + L
Sbjct: 744 TVTYTTLVKGL 754
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 176/444 (39%), Gaps = 42/444 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + + G+ KD + E A + + E K P+ + LI S KW+
Sbjct: 163 PTLISYSIIIDGLCKDRREDE-ARELFKEMKA-QGMMPDVISYTSLIHGFCHSGKWEKAK 220
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
L + + PD T L+ + K AN LL+V + G I ++ +++ + G
Sbjct: 221 CLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGL 280
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
H ++ MK G D+ Y +M+ + G L E + D++
Sbjct: 281 CMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLN---DTSQ 337
Query: 257 FSTHMYK-------ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
+ + +L D L K G+ EA + M ++G + D Y++LI
Sbjct: 338 YGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHR 397
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
+ A LF ++ G D L+ + G + L + + M N
Sbjct: 398 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLND----------- 446
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+ R G C P ++Y+ II+ C+ +A ++F EM+ +G
Sbjct: 447 -----TGRYGI-------------KCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQG 488
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
V++Y++++ + +G+ A L +M G +P+V + L+DM + + +
Sbjct: 489 IMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEAN 548
Query: 490 KLWKEMERRKVTPDKVSYTTVISA 513
KL + + +R D V+ TT++
Sbjct: 549 KLLEVVIQRGCILDVVTCTTLVKG 572
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 112/291 (38%), Gaps = 47/291 (16%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
EL ++ +PD + S +HG
Sbjct: 660 ELFKEMKALGVIPDVISYTSLIHG------------------------------------ 683
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA 185
+S KW L + V PD T S L+ + K AN LL+V I G I
Sbjct: 684 -FCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP 742
Query: 186 -LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+ + + + G ++ KM+ G + D Y +M+ + G+ + L
Sbjct: 743 NTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELH 802
Query: 245 LECKSRKLDSTPFSTHM------YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
K D+ + T+ Y I+ D L K GR EA + F++MK G++ + Y
Sbjct: 803 ---KKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYT 859
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
SLI F +++ A+ LF E ++G+ + ++ + +EG ++K L
Sbjct: 860 SLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 101/276 (36%), Gaps = 85/276 (30%)
Query: 394 GCIPGQVTYASIINAYCR----------------------IALYS--------------- 416
G P T+ +IN C I YS
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64
Query: 417 -------KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+A ++ M Q+G +V YS+++ RI +A WL M+ GC P+
Sbjct: 65 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124
Query: 470 WIYNSLM-------------DMH--------------------------GRAKNLRQVE- 489
Y +LM +H G K+ R+ E
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184
Query: 490 -KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+L+KEM+ + + PD +SYT++I + + +++ +NE G D +G+++ +
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDM 244
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
F K ++ E +LL+ M G LD Y + + L
Sbjct: 245 FCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGL 280
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 122/556 (21%), Positives = 241/556 (43%), Gaps = 34/556 (6%)
Query: 24 KKSYRHTL--FSTCKAFPFVTVNPSSII--NHRFFQVNASTNFPTIELNRD---SHHQTA 76
K +YR T F + + + PSS + NH +A T P++ N S++ T
Sbjct: 7 KSAYRATASDFRILQQHMEMGIFPSSFLFFNHHHISTSACTRKPSLPQNNGGFVSNNSTN 66
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+ SF + +P RP + + + K++ ++
Sbjct: 67 ISIDDALASFYRMVRMNP-------------------RPSVAEFGKFLGSFAKKKQYSTV 107
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGG 195
VSL ++ V + ++ + L+ R A ++L ++F FN+ + G
Sbjct: 108 VSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALING 167
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLD 253
+ ++ +M G + Y I+ K G++ +F +E K D
Sbjct: 168 LCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPD 227
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
++T + DSL K +A++F +M ++GI + Y ++ F + ++ A
Sbjct: 228 VVTYNT-----IIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEA 282
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
LFKE + ++ D LV +EG+V + V E+M ++ + A+++G
Sbjct: 283 TRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDG 342
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+ +R A KV+E +I QGC PG +Y +IN +C+ +A+ + EM K +
Sbjct: 343 YCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPD 402
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V YS+++ + GR ++A+ + +M + G PN+ Y+ L+D + +L + KL K
Sbjct: 403 TVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLK 462
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
M+ +K+ P+ V +T +I A + ++ + +++ +G +M+ K
Sbjct: 463 SMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEG 522
Query: 554 QIEELVKLLQDMKSEG 569
+E L + M+ +G
Sbjct: 523 LSDEAYDLFRKMEDDG 538
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 94/201 (46%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
AV + ++ G P T+ ++IN C +A ++F EM ++G + V++Y++++
Sbjct: 142 AVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIIN 201
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
KTG A+ + KM+ GC+P+V YN+++D + + + + EM R + P
Sbjct: 202 GLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPP 261
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ +Y ++ + + + + + E + D I+V K + E +
Sbjct: 262 NVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVF 321
Query: 563 QDMKSEGTKLDERLYHSAMNA 583
+ M +G + + Y++ M+
Sbjct: 322 ETMTEKGVEPNISTYNALMDG 342
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/428 (19%), Positives = 179/428 (41%), Gaps = 20/428 (4%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
E+ R H P+ +++ ++G+ K T +A D + + ++ +P+ T +I
Sbjct: 183 EMVRRGHE----PNVISYNTIINGLCKTGNTS-MAVDVFKKMEQ-NGCKPDVVTYNTIID 236
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEI 184
L + + + + + + P+ T + +V C+ + + ++ D
Sbjct: 237 SLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMP 296
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY---YKIGDSEKVA 241
+ + G K M LV+E M G+ + Y +M+ Y + +++KV
Sbjct: 297 DTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF 356
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
+ + + P H Y IL + KS R EA +M K + D Y++L+
Sbjct: 357 EIMI-----RQGCAP-GVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 410
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAK 359
K A +FKE G+L P + +L+ + + G +++ L +++SM+ K
Sbjct: 411 QGLCQFGRPKEALNIFKEMCSYGLL--PNLVTYSILLDGFCKHGHLDEALKLLKSMQEKK 468
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
L+ + ++ G A +++ +L + G P TY +I + L +A
Sbjct: 469 LEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAY 528
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
+F +M+ GF +Y+ M+ + + A+ L+ +M K N+ + L+D+
Sbjct: 529 DLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLE 588
Query: 480 GRAKNLRQ 487
+ + + Q
Sbjct: 589 SQDEIISQ 596
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 194/420 (46%), Gaps = 11/420 (2%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ +N+ M GY K+ ++YE+M+ GI D + ++ +YK G E L +
Sbjct: 372 IMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKD 431
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA--SLICSF 304
L P ++ I L +GR EA++F DM EKG+ PSI A S+I ++
Sbjct: 432 ISVLGL--LP-DRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGL--SPSIIAFNSVIAAY 486
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ A E +K G+ P C L++ G +++ +++ M L +++
Sbjct: 487 SQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNN 546
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++ F KR A ++ ++ +G P V +++ I+ + L +A VF+E
Sbjct: 547 MAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLE 606
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M +KG AY+S++ + K G++ +A+ L M+ +G P+++ N ++ +
Sbjct: 607 MLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGR 666
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+R ++ +M + ++PD ++Y T+I+ Y +A + N +G D I
Sbjct: 667 MRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNI 726
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA----LRDAGLQMQAQWLQQNF 600
+ F ++ V +L ++ S G + Y+S +N + D + + A+ L+ F
Sbjct: 727 RIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDILDRAMILTARLLKMAF 786
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 135/312 (43%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ + ++ K G EA K F +KE G + +Y +L+ + + E+ A L++E
Sbjct: 339 FNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMR 398
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+KG+ D LV + + G E +++ + L + V+G
Sbjct: 399 KKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLD 458
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A++ ++ +G P + + S+I AY + L KA + + M G SS++
Sbjct: 459 EAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLL 518
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
GR+++A L+ +M KG N + L+D + ++ + LW EMERR +
Sbjct: 519 MGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIF 578
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD V+++ I ++ + + E G + + ++ F K ++ E +KL
Sbjct: 579 PDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKL 638
Query: 562 LQDMKSEGTKLD 573
+ M+ G D
Sbjct: 639 EKVMRHRGLLPD 650
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 136/322 (42%), Gaps = 41/322 (12%)
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
F+AL+ M+E G+ S A L + + +LFK+ +G P+ C
Sbjct: 212 GFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRG----PQPC-- 265
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
K S I+ GF ++ + +
Sbjct: 266 ------------------------KYTFS-----GIILGFCRKGCIHLGESLLHLMPKFH 296
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
C P Y +INA C S A F M ++G + VV +++++ + K G + +A
Sbjct: 297 CEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEAR 356
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA- 513
L +K G PN +YN+LM+ + + + + Q L++EM ++ + PD +++ ++S
Sbjct: 357 KLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGH 416
Query: 514 --YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
Y R + D +K + + G + DR++ I V +++E ++ L DM +G
Sbjct: 417 YKYGREEDGDRLLK---DISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLS 473
Query: 572 LDERLYHSAMNALRDAGLQMQA 593
++S + A AGL+ +A
Sbjct: 474 PSIIAFNSVIAAYSQAGLEDKA 495
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 111/271 (40%), Gaps = 40/271 (14%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++AF++ + G +K + V+ +M G++ ++ Y ++ + K G + L
Sbjct: 581 VVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEK 640
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ R L F+T+M + L K GR A+ F DM + G+ D Y +LI +
Sbjct: 641 VMRHRGLLPDIFTTNM---IIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYC 697
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
++ A+ L G +P++ + N +
Sbjct: 698 KAFDMVNADNLVNRMYASG--SNPDL----------------------TTYNIR------ 727
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++GF R AV + ++L+S G +P VTY S++N C L +A + +
Sbjct: 728 -----IHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDIL-DRAMILTARL 781
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRI-RDAMW 455
+ F VV + +++ + K G R MW
Sbjct: 782 LKMAFVPNVVTANLLLSQFYKQGMPERTLMW 812
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 186/436 (42%), Gaps = 6/436 (1%)
Query: 102 DYYNEAKKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
D + ++ P ST+ L+ + + K + +++SLS + + PD +T + L+
Sbjct: 95 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 154
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
S R+ A ++L + G + FN+ + G + +++K G
Sbjct: 155 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 214
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
D Y +M K+G++ L + + Y + DSL K + EA
Sbjct: 215 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIA---YNTIIDSLCKDRQVTEA 271
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
F +M KGI D Y SLI + ++ E K L E ++ + V +V
Sbjct: 272 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 331
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+EG++ DVV+ M ++ A+++G R AVKV++ ++ +GC+P
Sbjct: 332 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 391
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+Y +IN YC+I KA + +M +G V Y++++ GR++ A+ L
Sbjct: 392 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 451
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M A G P++ Y L+D + +L + L K +E + D + Y I RA
Sbjct: 452 EMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 511
Query: 519 EFDMCVKFYNEFRMNG 534
E + ++ G
Sbjct: 512 ELEAARDLFSNLSCQG 527
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 146/359 (40%), Gaps = 6/359 (1%)
Query: 249 SRKLDS--TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
S ++DS P + IL +S R A + + G D + + +LI
Sbjct: 135 STQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCV 194
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISD 364
++ A LF + +G P+V LM + G + ++ SM + +
Sbjct: 195 EGKIGEALHLFDKTIGEGF--QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNV 252
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
I++ K R A ++ ++I++G P TY S+I+A C + + + E
Sbjct: 253 IAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNE 312
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M VV +S++V K G I A +V M +G EP+V Y +LMD H
Sbjct: 313 MVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE 372
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+ + K++ M + P+ SY +I+ Y + + D + + + G + D
Sbjct: 373 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 432
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
++ + +++ + L +M + G D Y ++ L +A L + EG+
Sbjct: 433 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS 491
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 97/220 (44%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++ +K + Y + + Q+ S G P T +IN++C + A V ++ + G
Sbjct: 118 LLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLG 177
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+++++ G+I +A+ L K +G +P+V Y +LM+ + N
Sbjct: 178 CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI 237
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+L + M ++ P+ ++Y T+I + + R+ ++E G D ++
Sbjct: 238 RLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 297
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
L + + + LL +M + + ++ + ++AL G+
Sbjct: 298 CNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGM 337
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 187/419 (44%), Gaps = 41/419 (9%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
LI L ++D + L + Y V PD+ T S L+
Sbjct: 111 LITCLTNCNRYD--LELYHNLAFYEVFPDSVTFSVLM----------------------- 145
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
NSA+ G L ++ +Y+ M GI + ++A+ G ++ A
Sbjct: 146 -------NSAVKGGGSLKEVWA---LYQDMVQRGISPSVSVFGTFIKAFCDAGRLKE--A 193
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L + + KL+ PF+ +Y IL D+ G+ G+ EA +M+E+GI + Y +LI
Sbjct: 194 LLITTEMEKLN-VPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALIT 252
Query: 303 SFASITEVK---LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
+ + +AE L +E E G+ D L+ Y EGL E+ V MK
Sbjct: 253 GYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARG 312
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
++ + A++N +++RR A + +E + QG P TY ++++AY R +
Sbjct: 313 VQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQ 372
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
V+ M+ +G V Y +++ + K GR ++A L+ + K +G +P++ +YN L++ +
Sbjct: 373 AVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSY 432
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
R + + EM+ PD +Y T+I + R R+ +K++ E G + D
Sbjct: 433 MRGGRHVKASDILLEMKTAGFLPDSFTYCTLIYGFLRVRDQTKALKYHREMMNRGQLPD 491
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 150/329 (45%), Gaps = 9/329 (2%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAF-EALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
DS FS +L +S K G + E ++DM ++GI S++ + I +F +K
Sbjct: 137 DSVTFS-----VLMNSAVKGGGSLKEVWALYQDMVQRGISPSVSVFGTFIKAFCDAGRLK 191
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A + E E+ + + + L+ Y G +E+ ++ M+ ++ + A++
Sbjct: 192 EALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALI 251
Query: 372 NGF---SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
G+ +R + A + E++ + G P VT+ ++ AY L +AE+VF M+ +
Sbjct: 252 TGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKAR 311
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G +Y++++ Y + A ++ +G P V Y +L+D + RA +L V
Sbjct: 312 GVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMV 371
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+ +WK M+ +V+Y T++ A+ + + EF+ G D + +++
Sbjct: 372 QAVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNS 431
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ + + + +L +MK+ G D Y
Sbjct: 432 YMRGGRHVKASDILLEMKTAGFLPDSFTY 460
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 154/343 (44%), Gaps = 12/343 (3%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF----ASITEVKLA 313
S H+Y L L R L+ + ++ + D ++ L+ S S+ EV
Sbjct: 104 SVHVYNTLITCLTNCNRY--DLELYHNLAFYEVFPDSVTFSVLMNSAVKGGGSLKEVW-- 159
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L+++ ++G+ V + + + G +++ L + M+ + + I +++
Sbjct: 160 -ALYQDMVQRGISPSVSVFGTFIKAFCDAGRLKEALLITTEMEKLNVPFNVVIYNILIDA 218
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA---LYSKAEKVFIEMQQKGF 430
+ + A + ++ +G P TY ++I Y + AE + EM+ G
Sbjct: 219 YGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGL 278
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
VV ++ ++ YG G A + +MKA+G +PN + Y +L++ + + + +
Sbjct: 279 YPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAAR 338
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
++ + ++ V P +YT ++ AY RA + +M + ++ G V R ++ F
Sbjct: 339 AFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQ 398
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
K + +E L+++ K++G K D +Y+ +N+ G ++A
Sbjct: 399 KQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKA 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 116/263 (44%), Gaps = 7/263 (2%)
Query: 147 NVLPDAHTCSRLVASCVRA---RKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMY 202
+ P+ T + L+ + A R+F +A L++ G ++ F +G Y +
Sbjct: 239 GIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLT 298
Query: 203 YSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMY 262
V+ +MK+ G+ +S Y ++ AY + EK A F + + ++ T Y
Sbjct: 299 EQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPT---VETY 355
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
L D+ ++G ++ MK +G + Y +++ +F K A +L +E +
Sbjct: 356 TALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEARDLIEEFKN 415
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
+G D V L+ Y+ G K D++ MK A C ++ GF + R
Sbjct: 416 QGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTYCTLIYGFLRVRDQTK 475
Query: 383 AVKVYEQLISQGCIPGQVTYASI 405
A+K + +++++G +P TYA +
Sbjct: 476 ALKYHREMMNRGQLPDPKTYAKL 498
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 210/490 (42%), Gaps = 43/490 (8%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQ-VFITDGEIALLAF--NSAMGGYNKLHMYYSTI 206
PD +++V +CV A +A +++ + ++G AF N + G + +
Sbjct: 155 PDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDAL 214
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM-YKIL 265
V+++M G+V + Y +++ + K GD E L + + L P + Y +L
Sbjct: 215 KVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL----RDQMLHDGPKPNIVTYNVL 270
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
L ++GR E +M + D Y+ L E + LF E+ +KG+
Sbjct: 271 LSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGV 330
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ C L+ ++G V K V+E + + L + I ++NG+ + R A
Sbjct: 331 MLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFC 390
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++EQ+ S+ P +TY ++IN C++ + +KAE + +EM++ G D V +++++ YG
Sbjct: 391 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 450
Query: 446 KTGRIRDAMWLVAKMKAKGCE-----------------------------------PNVW 470
G++ +++ M+ KG + PN
Sbjct: 451 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 510
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+YNS++D + + + Q L ++M+ V+ V+Y ++ R+ + D +
Sbjct: 511 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 570
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
R G D ++ ++ ++LLQ+M G + R YH+ ++AL AG
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRV 630
Query: 591 MQAQWLQQNF 600
+ L Q
Sbjct: 631 HDMECLYQQM 640
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 193/432 (44%), Gaps = 6/432 (1%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
H P+ ++ L G+ + + E +E F P+ T +L L ++ +
Sbjct: 257 HDGPKPNIVTYNVLLSGLCRAGRMDETRV-LMDEMASHSMF-PDGFTYSILFDGLTRTGE 314
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNS 191
+++SL + V+ A+TCS L+ + K A +L++ + G + + +N+
Sbjct: 315 SRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT 374
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ GY ++ ++E+MKS I D Y ++ K+ K L +E +
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
+D S + L D+ G +G+ + DM++KGI D + S++ +F ++
Sbjct: 435 VDP---SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A + + K + + +V ++ YIE G E+ +VE MKN+ + S ++
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 551
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
G + A ++ L +QG P V+Y +II+A C KA ++ EM + G
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 611
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ Y ++V+ GR+ D L +M K EP+ IY ++D + R +N +V L
Sbjct: 612 PTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASL 671
Query: 492 WKEMERRKVTPD 503
KEM + + D
Sbjct: 672 KKEMSEKGIAFD 683
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 182/395 (46%), Gaps = 11/395 (2%)
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
+AG D+ + ++++A GD + VA + R + P Y ++ L +SG
Sbjct: 150 AAGARPDTFAWNKVVQACVAAGDLD-VALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSG 208
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD---PE 330
+ +ALK F +M + G++ + Y ++I +++ L + ML D P
Sbjct: 209 KGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQ-----MLHDGPKPN 263
Query: 331 VCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
+ VL+ G +++T +++ M + + + +G ++ + ++
Sbjct: 264 IVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFA 323
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+ + +G + G T + ++N C+ +KAE+V + G V Y++++ Y +
Sbjct: 324 ESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVR 383
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+R A + +MK++ P+ YN+L++ + + + + E L EME+ V P ++
Sbjct: 384 DLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFN 443
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
T+I AY A + + C ++ + G D G +V F K +I E V +L DM +
Sbjct: 444 TLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK 503
Query: 569 GTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
+ ++Y+S ++A ++G QA L + + +
Sbjct: 504 DVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNS 538
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 139/607 (22%), Positives = 244/607 (40%), Gaps = 115/607 (18%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIR----------YLVQSKKWDSIVSLSEDFKIYNVL 149
A+D +K +FRP S +LI L ++ + D V L E + +
Sbjct: 29 AFDIIQTMRKF-KFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQNRKV 87
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILV 208
P A+ + ++ A KF A LL+ G I +++A+N + K + +
Sbjct: 88 PCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRI 147
Query: 209 YEKMK--------SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----------CKS 249
+E+MK + I++D C + A +I D + A LF CK+
Sbjct: 148 FEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKA 207
Query: 250 RKLDS-------------TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+KL+ TP + + L D LGK GR +A + M + G + +
Sbjct: 208 QKLEEACSIFEGMDDKVCTPNAV-TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIV 266
Query: 297 YASLICSF----------------------ASIT-------------EVKLAEELFKEAE 321
Y SLI SF +T E + LF+E
Sbjct: 267 YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN 326
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
G + D L+ ++ GL +T ++ +MK + A+++GF K
Sbjct: 327 AHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVN 386
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A ++ E++ +G P VTY S+I+ +I +A +F E + G VV YSS++
Sbjct: 387 KAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLI 446
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL---------------- 485
+GK GRI +A ++ ++ KG PNV+ +N L+D +A+ +
Sbjct: 447 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCP 506
Query: 486 ----------------RQVEK---LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
R+ K W+EM++ + P+ ++YTT+IS +A
Sbjct: 507 PNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGL 566
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
++ F+ NGG+ D A M+ S ++ + L ++ + +G + + ++AL
Sbjct: 567 FSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHK 626
Query: 587 AGLQMQA 593
A QA
Sbjct: 627 AECLEQA 633
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 179/435 (41%), Gaps = 28/435 (6%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVY 209
P ++ LVA+CV++RK + A ++Q + F A Y L +L++
Sbjct: 8 PSSNISIELVANCVKSRKLREAFDIIQT------MRKFKFRPAFSAYTILIGKVGLMLLF 61
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+ LD + +E + ++ + KV + Y +
Sbjct: 62 PWVLCKANRLD-----EAVELFEQLEQNRKVPC----------------AYAYNTMIMGY 100
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
G +G+ EA K KG + Y ++ V+ A +F+E + + P
Sbjct: 101 GSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVP 160
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
+ L+ M EG + L++ + M+ A L + +++ K + A ++E
Sbjct: 161 TYNI-LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEG 219
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ + C P VT++S+I+ + A ++ +M G + Y+S++ + K GR
Sbjct: 220 MDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGR 279
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
D + +M GC P++ + N+ MD +A + L++E+ PD SY+
Sbjct: 280 KEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSI 339
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+I +A + + + + G V+D ++ F K ++ + +LL++MK +G
Sbjct: 340 LIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKG 399
Query: 570 TKLDERLYHSAMNAL 584
Y S ++ L
Sbjct: 400 HPPTVVTYGSVIDGL 414
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/322 (18%), Positives = 134/322 (41%), Gaps = 17/322 (5%)
Query: 13 SALINTTYTCMKKSYRHTLFSTCKAFPFVTVNPSSIINHRFFQV--NASTNFPTIELNRD 70
++LI + + C +K H ++ K +P + + + A L R+
Sbjct: 268 TSLIRSFFKCGRKEDGHKIY---KEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFRE 324
Query: 71 SHHQTAVPDAKKFDSFLHGMLKDP---QTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYL 127
+ +PDA+ + +HG++K +T EL Y + L + +I
Sbjct: 325 INAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVL-----DTHAYNAVIDGF 379
Query: 128 VQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIAL 186
+S K + L E+ K+ P T ++ + + A L + ++G ++ +
Sbjct: 380 CKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNV 439
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ ++S + G+ K+ L+ E++ G+ + + +++A K +E++ +
Sbjct: 440 VVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK---AEEINEALIC 496
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+S K P + Y IL + L + + +A F+++M++ G+ + Y ++I A
Sbjct: 497 FQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAK 556
Query: 307 ITEVKLAEELFKEAEEKGMLRD 328
+ A LF + G + D
Sbjct: 557 AGNILEASGLFSRFKANGGIPD 578
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 193/426 (45%), Gaps = 5/426 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTIL- 207
PDA + LV++ RA +F+ A + Q + G + AL+ +N Y+K+ + + ++
Sbjct: 182 PDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVA 241
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ + MK GI D Y ++ + G + A +F E K+ + + + L D
Sbjct: 242 LVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVT---FNSLLD 298
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ + EA+ + M+ G Y SLI ++ ++ A EL +E E +GM
Sbjct: 299 VYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKP 358
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ G ++ L M + C A++ R + + V+
Sbjct: 359 DVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVF 418
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ L S G +P VT+ ++++ + + L S+ VF EM++ G+ Y S+++ Y +
Sbjct: 419 DDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRC 478
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G AM + +M G P++ YN+++ R Q EKL+ EM R PD++SY
Sbjct: 479 GLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSY 538
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
++++ AY A++ D + + +V V +K++ + E K Q+++
Sbjct: 539 SSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRR 598
Query: 568 EGTKLD 573
LD
Sbjct: 599 RRCSLD 604
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/544 (20%), Positives = 226/544 (41%), Gaps = 70/544 (12%)
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EI 184
Y S W +V+L + K + D +T + L++ C R + A + G E
Sbjct: 229 YSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEP 288
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL- 243
+ FNS + Y K + I V ++M++AG Y ++ AY K G E+ L
Sbjct: 289 DKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELK 348
Query: 244 -FLECKSRKLDSTPFSTHM------------------------------YKILCDSLGKS 272
+E + K D ++T + Y L G
Sbjct: 349 QEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVR 408
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
G+ E + F D++ G + D + +L+ F +FKE ++ G + + +
Sbjct: 409 GKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTY 468
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLI 391
+ L+ Y GL ++ +++ + M A + A+++ + R G W A K++ +++
Sbjct: 469 VSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALA-RGGRWEQAEKLFAEMV 527
Query: 392 SQGCIPGQVTYASIINAYC------------------RIALYS----------------- 416
+ C P +++Y+S+++AY RI ++
Sbjct: 528 DRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLP 587
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ EK F E++++ + ++MV++YGK ++ +++ M + YNSLM
Sbjct: 588 ETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLM 647
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
M+ R + + E + E++ + PD+ SY TVI AY R + + ++E + +G
Sbjct: 648 HMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVK 707
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
D I + + EE + L++ + ++G + +ER ++S + G ++A+
Sbjct: 708 PDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSF 767
Query: 597 QQNF 600
N
Sbjct: 768 LSNL 771
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 166/362 (45%), Gaps = 36/362 (9%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT-EVKLAEELFKEA 320
Y L + ++GR +A+ F+ M + G+ Y + +++ ++ K L
Sbjct: 187 YTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSM 246
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
+E G+ RD L+ GL + V + MK A + ++++ + K R +
Sbjct: 247 KEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKH 306
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A+ V +++ + GC P VTY S+I+AY + L +A ++ EM+ +G VV Y+++
Sbjct: 307 EEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTL 366
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG-RAK---------NLR---- 486
++ + G+I A+ ++M GC PN+ YN+L+ +HG R K +LR
Sbjct: 367 ISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGY 426
Query: 487 ---------------------QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
+V ++KEM++ P++ +Y ++IS+Y+R FD ++
Sbjct: 427 VPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAME 486
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
Y G D + ++ ++ + E+ KL +M K DE Y S ++A
Sbjct: 487 IYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYA 546
Query: 586 DA 587
+A
Sbjct: 547 NA 548
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 149/324 (45%), Gaps = 5/324 (1%)
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
G G A ++ RD+ L P + + I FA + A + + A D
Sbjct: 129 GHPGIAVAVVRAARDLHGDRALHHPRVLPTAIRVFARAGCLAEASAILEAAPAP----DA 184
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYE 388
LV + G + V + M + ++ + + + +SK W V + +
Sbjct: 185 SAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVD 244
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+ G + TY ++I+ R L+ +A +VF EM+ GF+ V ++S++ +YGK
Sbjct: 245 SMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKAR 304
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ +A+ ++ +M+ GC P+V YNSL+ + + L + +L +EME R + PD V+YT
Sbjct: 305 KHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYT 364
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
T+IS +R + D + Y+E NG + ++ + + E++ + D++S
Sbjct: 365 TLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSA 424
Query: 569 GTKLDERLYHSAMNALRDAGLQMQ 592
G D +++ ++ GL +
Sbjct: 425 GYVPDVVTWNTLLSVFGQNGLDSE 448
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 147/316 (46%), Gaps = 17/316 (5%)
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV- 345
E D S Y +L+ +F+ + A +F+ + G+ P + V+ + +
Sbjct: 177 EAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGV--QPALVTYNVVFHAYSKMSV 234
Query: 346 --EKTLDVVESMKNAKLK-----ISDCISCAIVNGFSKRRG-YWAAVKVYEQLISQGCIP 397
++ + +V+SMK ++ + ISC +RRG + A +V++++ + G P
Sbjct: 235 PWKEVVALVDSMKEDGIERDRYTYNTLISCC------RRRGLHREAAQVFDEMKAAGFEP 288
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
+VT+ S+++ Y + + +A V M+ G VV Y+S+++ Y K G + +A+ L
Sbjct: 289 DKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELK 348
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+M+ +G +P+V Y +L+ R + + EM R +P+ +Y +I +
Sbjct: 349 QEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVR 408
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+F + +++ R G V D ++ VF + E+ + ++MK G + Y
Sbjct: 409 GKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTY 468
Query: 578 HSAMNALRDAGLQMQA 593
S +++ GL QA
Sbjct: 469 VSLISSYSRCGLFDQA 484
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/488 (20%), Positives = 213/488 (43%), Gaps = 9/488 (1%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
TL +++ +S ++D ++ + + V PD T + L+ + RA A L+
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 179 ITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
G + ++ FNS + G K + V+ M + D + ++ + ++G+
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
E+ + E + R + S + L G+ A + R+MK G++ D IY
Sbjct: 279 EEAMKFYKEMQQRGVTPDVVS---FSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIY 335
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
+I F + A + E G L D L+ ++ + +++ MK
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKE 395
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ C +++G+ + + A+++++ L+ Q P V Y S+I+ CR +K
Sbjct: 396 RGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAK 455
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A +++ +M + V YS ++ + + G++ +A + +M +KG PN+ YNS++
Sbjct: 456 ANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIK 515
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ R+ N+++ ++ ++M + + PD +++ T+I Y + +N
Sbjct: 516 GYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQP 575
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG-----LQMQ 592
D +++ FS+ +EE ++ + M + G + D Y S +N AG Q+
Sbjct: 576 DAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLH 635
Query: 593 AQWLQQNF 600
+ + + F
Sbjct: 636 DEMMHRGF 643
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 207/460 (45%), Gaps = 20/460 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHT------CSRLVASCVRARKF 168
P+ LLIR QS+K E F+ + +L D + L+A+ RA
Sbjct: 85 PQPQVFDLLIRTYTQSRKP------REAFEAFRLLLDHRVPVPASASNALLAALSRAGWP 138
Query: 169 KIANTLLQ-VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
+A + V +D E+ N + Y K + V +M+ + D + +
Sbjct: 139 HLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVL 198
Query: 228 MEAYYKIGDSEKVAALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
++A ++ GD + AL + K K F++ + K LC K R +A + FR M
Sbjct: 199 IDARFRAGDVDAAIALVDSMANKGLKPGIVTFNS-VLKGLC----KHRRFDKAKEVFRAM 253
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+ + D + LI F + EV+ A + +KE +++G+ D L+ ++ G +
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKM 313
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+ + MK L I ++ GF + A++V ++++ GC+P VTY ++
Sbjct: 314 DHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTL 373
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
+N C+ AE++ EM+++G + +++++ Y + G A+ L + +
Sbjct: 374 LNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRL 433
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
P+V YNSL+D R +L + +LW +M R++ P+ V+Y+ +I ++ + +
Sbjct: 434 RPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFG 493
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
F +E G + + ++ + + +++ + LQ M
Sbjct: 494 FLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKM 533
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/466 (19%), Positives = 209/466 (44%), Gaps = 10/466 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T +LI ++ D+ ++L + + P T + ++ + R+F A +
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEV 249
Query: 175 LQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+ + +A + +FN +GG+ ++ + Y++M+ G+ D + ++ +
Sbjct: 250 FRA-MDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFS 308
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
G + AA E K L P +Y ++ ++G EAL+ +M G L
Sbjct: 309 TRGKMDHAAAYLREMKGLGL--VPDGV-IYTMVIGGFCRAGSMSEALRVRDEMVGLGCLP 365
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLD 350
D Y +L+ + AEEL E +E+G+ P++C L+ Y +G EK L
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVT--PDLCTFTTLIHGYCRDGNFEKALQ 423
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ +++ + +L+ ++++G ++ A ++++ + ++ P VTY+ +I+++C
Sbjct: 424 LFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHC 483
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+A EM KG ++ Y+S++ Y ++G ++ + KM P++
Sbjct: 484 EKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLI 543
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+N+L+ + + +N+ ++ ME+ V PD V+Y +I+ ++ + + + +
Sbjct: 544 TFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKM 603
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+G DR ++ +E +L +M G D++
Sbjct: 604 GASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDKF 649
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 106/227 (46%), Gaps = 2/227 (0%)
Query: 378 RGYWA--AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
R W A + Y ++S T ++++YC+ + KA+ V EM+++ VV
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
++ ++ + G + A+ LV M KG +P + +NS++ + + + +++++ M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
++ V PD S+ +I + R E + +KFY E + G D ++G+FS ++
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKM 313
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+ L++MK G D +Y + AG +A ++ G
Sbjct: 314 DHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVG 360
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 101/266 (37%), Gaps = 10/266 (3%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
EL + + PD F + +HG +D ++ A ++ RP+ LI
Sbjct: 388 ELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEK-ALQLFDTLLH-QRLRPDVVAYNSLID 445
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA 185
+ + L +D + P+ T S L+ S + + A L ++ G +
Sbjct: 446 GMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLP 505
Query: 186 -LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
++ +NS + GY + +KM I+ D + ++ Y K + +F
Sbjct: 506 NIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVF 565
Query: 245 --LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
+E + + D+ Y ++ + + G EA + F+ M GI D Y SLI
Sbjct: 566 NIMEKEMVQPDAV-----TYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLIN 620
Query: 303 SFASITEVKLAEELFKEAEEKGMLRD 328
+ K A +L E +G D
Sbjct: 621 GHVTAGNSKEAFQLHDEMMHRGFAPD 646
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 132/584 (22%), Positives = 251/584 (42%), Gaps = 63/584 (10%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE------FRPEKS 118
+EL + + VP A + + ++G+ ++L+ A KL E +P
Sbjct: 423 LELLDEMEKRNLVPSAVSYGAMINGLC---HCKDLSL-----ANKLLEKMTFSGLKPNVV 474
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCV-RARKFKIANT-LLQ 176
+LI + + L + V PD C + SC+ +A K + A+T LL+
Sbjct: 475 VYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIF-CYNAIISCLSKAGKMEEASTYLLE 533
Query: 177 VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
+ + + F + + GY+K +++M G++ ++ Y ++ ++K G+
Sbjct: 534 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 593
Query: 237 SEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
+ ++F + + D S ++ +L K+GR EALK F ++KEKG++ D
Sbjct: 594 LMEALSIFRRLHALGVLPDVQTCSAFIHGLL-----KNGRVQEALKVFSELKEKGLVPDV 648
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
Y+SLI F EV+ A EL E KG+ + + LV + G +++ + +
Sbjct: 649 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 708
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
M L+ +++G+ K A ++ ++ S+G P Y ++++ C+
Sbjct: 709 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 768
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
KA +F EM QKGF +++++++ Y K+ +I++A L +M AK P+ Y +
Sbjct: 769 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 827
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRK----------------------------------- 499
++D H +A + + L+KEM+ R
Sbjct: 828 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 887
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
V PD+V+Y VI A+ + K +E G + I +++ K + E
Sbjct: 888 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 947
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
KLL +M G K ++ + + +AG +A + FEG
Sbjct: 948 KLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRV---FEGV 988
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 206/492 (41%), Gaps = 40/492 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PDA F +F+ G K + E A Y++E P +LI ++ +
Sbjct: 541 PDAVTFGAFILGYSKTGKMTE-AAKYFDEMLD-HGLMPNNPLYTVLINGHFKAGNLMEAL 598
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
S+ VLPD TCS + ++ + + A
Sbjct: 599 SIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEA-------------------------- 632
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
+ V+ ++K G+V D Y ++ + K G+ EK L E + + F
Sbjct: 633 --------LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 684
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+Y L D L KSG A K F M EKG+ D Y+++I + V A LF
Sbjct: 685 ---IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 741
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E KG+ V LV +EG +EK +++ M + + +++G+ K
Sbjct: 742 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN-TLIDGYCKS 800
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A ++++++I++ +P VTY ++I+ +C+ +A +F EMQ++ V Y
Sbjct: 801 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 860
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+S++ Y K G+ + L KM AKG +P+ Y ++ H + NL + KL E+
Sbjct: 861 TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 920
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ + + +I+A + + K +E G A +V F + +++E
Sbjct: 921 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDE 980
Query: 558 LVKLLQDMKSEG 569
++ + +KS G
Sbjct: 981 ATRVFEGVKSLG 992
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 178/410 (43%), Gaps = 3/410 (0%)
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
I+L+ NS + K M VY M A + D Y ++ A K GD +
Sbjct: 191 ISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRV 250
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
+E + L+ F +Y ++ + + + G EA++ R M EKG++ + Y +
Sbjct: 251 LIEMDEKGLNPNEF---IYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAG 307
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A+ F+E ++ G+ D C L+ ++ EG +++ L + + M + + I+
Sbjct: 308 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPIN 367
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+++G K A ++ + +++ GC P T+ +I YCR +A ++
Sbjct: 368 LITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLD 427
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM+++ V+Y +M+ + A L+ KM G +PNV +Y+ L+ +
Sbjct: 428 EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEG 487
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ + +L M V PD Y +IS ++A + + + E + G D G
Sbjct: 488 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 547
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ +SK ++ E K +M G + LY +N AG M+A
Sbjct: 548 AFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA 597
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/488 (20%), Positives = 204/488 (41%), Gaps = 33/488 (6%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T ++ L ++K+ + E+ + + PD + CS L+ +R +
Sbjct: 296 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 355
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
V ++ G I L+ +N + G K + + M + G +S +C ++E Y +
Sbjct: 356 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCR 415
Query: 234 IGDSEKVAALFLECKSRKLDSTPFS--------------------------------THM 261
+ + L E + R L + S +
Sbjct: 416 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 475
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y IL + GR EA + M G+ D Y ++I + +++ A E +
Sbjct: 476 YSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 535
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+G+ D +L Y + G + + + M + L ++ + ++NG K
Sbjct: 536 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 595
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+ ++ +L + G +P T ++ I+ + +A KVF E+++KG V YSS++
Sbjct: 596 EALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 655
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ + K G + A L +M KG PN++IYN+L+D ++ ++++ KL+ M + +
Sbjct: 656 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 715
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD V+Y+T+I Y ++ ++E G + +V K +E+ + L
Sbjct: 716 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 775
Query: 562 LQDMKSEG 569
++M +G
Sbjct: 776 FREMLQKG 783
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 199/479 (41%), Gaps = 54/479 (11%)
Query: 39 PFVTVNPSSIINHRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQE 98
P TV +IN F A + + R H +PD + +F+HG+LK+ + QE
Sbjct: 579 PLYTV----LINGHF---KAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQE 631
Query: 99 LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRL 158
A ++E K+ P+ T LI + + + L ++ + + P+ + L
Sbjct: 632 -ALKVFSELKE-KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNAL 689
Query: 159 VASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGI 217
V ++ + A L G E + +++ + GY K ++ +M S G+
Sbjct: 690 VDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV 749
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM-YKILCDSLGKSGRAF 276
S Y ++ K GD EK LF R++ F+T + + L D KS +
Sbjct: 750 QPHSFVYNALVHGCCKEGDMEKAMNLF-----REMLQKGFATTLSFNTLIDGYCKSCKIQ 804
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
EA + F++M K I+ D Y ++I +++ A LFKE +E+ ++ D
Sbjct: 805 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVD--TVTYTS 862
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
LMY G++K ++E+++++G
Sbjct: 863 LMY---------------------------------GYNKLGQSSEVFALFEKMVAKGVK 889
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P +VTY +I A+C+ +A K+ E+ KG + ++ K + +A L
Sbjct: 890 PDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 949
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
+ +M G +P++ N+L+ A + + ++++ ++ + PD TT+I N
Sbjct: 950 LDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT---TTLIDLVN 1005
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/284 (19%), Positives = 112/284 (39%), Gaps = 35/284 (12%)
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
P ++ LI S+ + + A +F A+ +L C L+ ++ G++E V
Sbjct: 158 PVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYN 217
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M +AK+ +V K A +V ++ +G P + Y+ +I C++
Sbjct: 218 GMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQV- 276
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
G I +A+ L M KG PN + Y
Sbjct: 277 ----------------------------------GDIDEAVELKRSMGEKGLVPNTYTYT 302
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+ RAK + + + ++EM++ + PD + + +I + R + D ++ +
Sbjct: 303 IITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSC 362
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
G I+ +++ K ++E+ ++L+ M + G K + R +
Sbjct: 363 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTF 406
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 212/472 (44%), Gaps = 47/472 (9%)
Query: 154 TCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTIL--VYE 210
T + L+ +C R + A L+ DG + + ++S + + + S IL +Y
Sbjct: 171 TYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYA 230
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
++++ I +D I+ + K GD + +S L+ P ST + IL +LG
Sbjct: 231 EIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKP-STLVAVIL--ALG 287
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
SGR EA F +++E G+ Y +L+ + +K AE + E E+ G+ D +
Sbjct: 288 NSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQ 347
Query: 331 -----------------------------------VCLKLVLMYIEEGLVEKTLDVVESM 355
V +++ Y ++G +K+ V++ M
Sbjct: 348 TYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDM 407
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
K++ ++ +++ F K A+ +E+++S+G P VT+ ++I+ +C+ +
Sbjct: 408 KSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRH 467
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
AE++F EMQQ+G+ C+ Y+ M+ G+ R ++KM+++G +PN Y +L
Sbjct: 468 DMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTL 527
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM--N 533
+D++G++ + + ++ P Y +I+AY + ++ V N FR+
Sbjct: 528 VDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAV---NAFRLMTT 584
Query: 534 GGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G+ +A ++ F + + E +LQ MK + D Y + M AL
Sbjct: 585 EGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKAL 636
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 151/319 (47%), Gaps = 15/319 (4%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y IL ++LG+S + +EA + ++ +L P Y +LI + A +V+ A L +
Sbjct: 141 LYSILINALGRSEKLYEAFL----LSQRQVL-TPLTYNALIGACARNGDVEKALNLMSKM 195
Query: 321 EEKGMLRDPEVCLKLVLMY------IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
G D V ++ Y I+ +++K +E+ K++I + I+ GF
Sbjct: 196 RRDGYQPD-FVNYSSIIQYLTRSNKIDSPILQKLYAEIET---DKIEIDGHLMNDIIVGF 251
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
SK A++ S G P T ++I A +AE +F E+++ G +
Sbjct: 252 SKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRT 311
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
AY++++ Y +TG ++DA ++V++M+ G +P+ Y+ L+D++ A + KE
Sbjct: 312 RAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKE 371
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
ME V P+ ++ +++ Y E+ + + + +G DR +M+ F K +
Sbjct: 372 MEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNC 431
Query: 555 IEELVKLLQDMKSEGTKLD 573
++ + + M SEG D
Sbjct: 432 LDHAMATFERMLSEGIPPD 450
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 155/359 (43%), Gaps = 45/359 (12%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P++ T LLI + +W+S + ++ + NV P+++ SR++A+ +++ +
Sbjct: 343 KPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQ 402
Query: 174 LLQVFITDGEIALLAFNSAM----GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
+L+ + G F + M G YN L +T +E+M S GI D + +++
Sbjct: 403 VLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMAT---FERMLSEGIPPDIVTWNTLID 459
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
+ K G + LF E + R +P T Y I+ +S+G+ R + F M+ +G
Sbjct: 460 CHCKSGRHDMAEELFSEMQQRGY--SPCIT-TYNIMINSMGEQQRWEQVTAFLSKMQSQG 516
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
+ + Y + LV +Y + G +
Sbjct: 517 LQPNSITYTT-----------------------------------LVDVYGKSGRFSDAI 541
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+ +E +K+ K + + A++N +++R AV + + ++G P + S+INA+
Sbjct: 542 ECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAF 601
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
++A V M++ + VV Y++++ + + + + +M A GC P+
Sbjct: 602 GEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASGCTPD 660
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 97/223 (43%), Gaps = 5/223 (2%)
Query: 385 KVYEQ-LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
K+YE L+SQ + +TY ++I A R KA + +M++ G+ V YSS++
Sbjct: 154 KLYEAFLLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQY 213
Query: 444 YGKTGRIRDAMW--LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
++ +I + L A+++ E + + N ++ +A + + + + +
Sbjct: 214 LTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLN 273
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG-GVIDRAIAGIMVGVFSKLSQIEELVK 560
P + VI A + + E R NG RA ++ G + + +++
Sbjct: 274 PKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKG-YVRTGSLKDAEF 332
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
++ +M+ G K DE+ Y ++ AG A+ + + E +
Sbjct: 333 VVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEAS 375
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 211/455 (46%), Gaps = 44/455 (9%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
+LA++ Y E + TL +++ L + +K+++++ D + V D T +
Sbjct: 239 DLAWEIYGEVVR-GGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNT 297
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+ + R + A LL F + G E LL +N+ + G K+ Y V +M G
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGR 274
+ ++ Y ++ + + + +F E R + D FS+ L L ++G
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSS-----LIGVLARNGH 412
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLI---CSFASITE-VKLAEE--------------- 315
++AL FR+M+ GI+ D IY LI C ++++ +K+ +E
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472
Query: 316 ----------------LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
LF E E+GM+ D L+ Y ++G ++K L++ E+M
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
LK +++GF K A ++++ +I + IP ++Y +++N +C L +A
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEAL 592
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
+ +M +KG +V ++++ Y ++G + A ++KM + G P+ + YN+L+D +
Sbjct: 593 NLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGY 652
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ NL + L EME+R + + ++Y +++ +
Sbjct: 653 LKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 135/289 (46%)
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
IY L+ ++ +++ E F+ KG+ C KL+ + G V+ ++ +
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
++++ +VN K R + + + +G VTY ++INAYCR L
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+A ++ +G + ++ Y++++ K G+ A ++ +M G PN YN+L
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ R N+ + ++++ EM RR V PD VS++++I R + + E +G
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
V D I I++ F + + + +K+ +M + G +D Y++ +N L
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGL 477
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 153/340 (45%), Gaps = 6/340 (1%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFF-RDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ + I+ ++L K R FE + FF DM+ KG+ D Y +LI ++ V+ A +
Sbjct: 255 LNVYTLNIMVNALCKD-RKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQ 313
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L +GM +P + ++Y + G ++ DV+ M L + ++
Sbjct: 314 LLNSFSSRGM--EPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVE 371
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+R A ++++++ +G +P V+++S+I R +A F EM++ G
Sbjct: 372 ICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V Y+ ++ + + G + DA+ + +M A+GC +V YN+ ++ + K + L+
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFN 491
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
EM R + PD ++TT+I Y + D + + D+ ++ F K
Sbjct: 492 EMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAG 551
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
++ +L DM + D Y + +N +GL +A
Sbjct: 552 EMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEA 591
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 125/281 (44%)
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ E KG+ D L+ Y EGLVE+ ++ S + ++ AI+ G
Sbjct: 279 FLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLC 338
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K Y A V +++ G P TY +++ CR +A+++F EM ++G +V
Sbjct: 339 KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLV 398
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
++SS++ + + G + A+ +M+ G P+ IY L+D R L K+ EM
Sbjct: 399 SFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
R D V+Y T ++ + + F +NE G V D ++ + K +
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ + L + M K D+ Y++ ++ AG +A+ L
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKEL 559
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%)
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
IY+ L+ + +AK LR+ + ++ + R+ V+ + ++ R D+ + Y E
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
G ++ IMV K + E ++ L DM+ +G D Y++ +NA GL
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308
Query: 591 MQAQWLQQNF 600
+A L +F
Sbjct: 309 EEAFQLLNSF 318
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 211/455 (46%), Gaps = 44/455 (9%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
+LA++ Y E + TL +++ L + +K+++++ D + V D T +
Sbjct: 239 DLAWEIYGEVVR-GGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNT 297
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+ + R + A LL F + G E LL +N+ + G K+ Y V +M G
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGR 274
+ ++ Y ++ + + + +F E R + D FS+ L L ++G
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSS-----LIGVLARNGH 412
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLI---CSFASITE-VKLAEE--------------- 315
++AL FR+M+ GI+ D IY LI C ++++ +K+ +E
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472
Query: 316 ----------------LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
LF E E+GM+ D L+ Y ++G ++K L++ E+M
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
LK +++GF K A ++++ +I + IP ++Y +++N +C L +A
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEAL 592
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
+ +M +KG +V ++++ Y ++G + A ++KM + G P+ + YN+L+D +
Sbjct: 593 NLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGY 652
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ NL + L EME+R + + ++Y +++ +
Sbjct: 653 LKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 135/289 (46%)
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
IY L+ ++ +++ E F+ KG+ C KL+ + G V+ ++ +
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
++++ +VN K R + + + +G VTY ++INAYCR L
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+A ++ +G + ++ Y++++ K G+ A ++ +M G PN YN+L
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ R N+ + ++++ EM RR V PD VS++++I R + + E +G
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
V D I I++ F + + + +K+ +M + G +D Y++ +N L
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGL 477
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 153/340 (45%), Gaps = 6/340 (1%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFF-RDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ + I+ ++L K R FE + FF DM+ KG+ D Y +LI ++ V+ A +
Sbjct: 255 LNVYTLNIMVNALCKD-RKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQ 313
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L +GM +P + ++Y + G ++ DV+ M L + ++
Sbjct: 314 LLNSFSSRGM--EPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVE 371
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+R A ++++++ +G +P V+++S+I R +A F EM++ G
Sbjct: 372 ICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V Y+ ++ + + G + DA+ + +M A+GC +V YN+ ++ + K + L+
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFN 491
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
EM R + PD ++TT+I Y + D + + D+ ++ F K
Sbjct: 492 EMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAG 551
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
++ +L DM + D Y + +N +GL +A
Sbjct: 552 EMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEA 591
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 125/281 (44%)
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ E KG+ D L+ Y EGLVE+ ++ S + ++ AI+ G
Sbjct: 279 FLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLC 338
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K Y A V +++ G P TY +++ CR +A+++F EM ++G +V
Sbjct: 339 KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLV 398
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
++SS++ + + G + A+ +M+ G P+ IY L+D R L K+ EM
Sbjct: 399 SFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
R D V+Y T ++ + + F +NE G V D ++ + K +
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ + L + M K D+ Y++ ++ AG +A+ L
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKEL 559
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%)
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
IY+ L+ + +AK LR+ + ++ + R+ V+ + ++ R D+ + Y E
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
G ++ IMV K + E ++ L DM+ +G D Y++ +NA GL
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308
Query: 591 MQAQWLQQNF 600
+A L +F
Sbjct: 309 EEAFQLLNSF 318
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 189/420 (45%), Gaps = 42/420 (10%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ +N M Y + +Y Y ++ + + Y +++AY K G EK A+F
Sbjct: 155 VIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFA 214
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E RK +P S +Y D L K G +A++ F MK G Y LI +
Sbjct: 215 EM--RKYGLSP-SAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYG 271
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
++ +A+ +F E + P +C LV EGL EK ++ E M+ A +
Sbjct: 272 KESKSHMAQNIFDEMRTQRC--KPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPD 329
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
A++ +S+ + A +++ + GC P + +Y +++AY R L+ A+ VF
Sbjct: 330 VYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 389
Query: 424 EMQQKGFDKC-------VVAYSS----------------------------MVAMYGKTG 448
EM++ G + AYSS M+ +YG+ G
Sbjct: 390 EMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLG 449
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ L + M+ C ++ YN L++++GRA + ++E+L++ + + + PD V++T
Sbjct: 450 QFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWT 509
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+ I AY+R + + C++ + + G D A +++ S QIE++ +++ M +
Sbjct: 510 SRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKD 569
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 155/329 (47%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y +L D+ G+ + + ++ E + YA L+ ++ ++ AE +F E
Sbjct: 157 VYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEM 216
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
+ G+ V + ++ G K +++ MK + + ++N + K
Sbjct: 217 RKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKS 276
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A +++++ +Q C P T+ +++NA R L KAE++F +MQ+ G++ V AY+++
Sbjct: 277 HMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNAL 336
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ Y + G A + + M+ GCEP+ YN ++D +GRA + +++EM+R +
Sbjct: 337 MESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGI 396
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
TP S+ ++SAY+ A C + +G D + M+ ++ +L Q ++
Sbjct: 397 TPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMED 456
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAGL 589
L M+ + D Y+ +N AG
Sbjct: 457 LFSTMQKGPCRADISTYNILINVYGRAGF 485
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 130/298 (43%)
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M + D +Y L+ ++ + K E + E E + + L+ Y + GL
Sbjct: 146 MNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 205
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+EK V M+ L S + A ++G K AV+++ ++ GC P TY
Sbjct: 206 LEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTM 265
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+IN Y + + A+ +F EM+ + + ++++V + G A + +M+ G
Sbjct: 266 LINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAG 325
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
EP+V+ YN+LM+ + RA +++ M+ PD+ SY ++ AY RA +
Sbjct: 326 YEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 385
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ E + G +++ +S + + ++ M G K D + +S +N
Sbjct: 386 AVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLN 443
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 183/416 (43%), Gaps = 16/416 (3%)
Query: 199 LHMYYSTILVY-------------EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+H+Y S I Y E+M S GI L+ +C I+ Y G++E F
Sbjct: 166 VHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFE 225
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ K+ L P +Y + + ++G M+E+G + +Y +++ FA
Sbjct: 226 KFKAENL--VPGGI-VYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFA 282
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
I + + F + G+ +V ++ + G + K LD++E M + +
Sbjct: 283 EIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKM 342
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
I I++G+++ + AA KV+E ++S G P VTY +++A+C+ KA V +
Sbjct: 343 IYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENI 402
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
Q + Y+S++ Y K G I+ A+ + ++K G P V YNSL+ +A+ +
Sbjct: 403 QANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQM 462
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ EM V P++ SYT + Y RA + + + + ID G +
Sbjct: 463 ENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGAL 522
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ K ++ V++ Q + G K + Y + ++ G +A+ L ++ +
Sbjct: 523 LKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQ 578
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/465 (18%), Positives = 194/465 (41%), Gaps = 40/465 (8%)
Query: 141 EDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKL 199
E FK N++P + +V + +A + LL +G + L + + + G+ ++
Sbjct: 225 EKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEI 284
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
+ + ++K+ G+ + Y I++ + K G+ K + E +
Sbjct: 285 RDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKM-- 342
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+Y ++ D + G A K + DM G+ D Y L+ +F + A + +
Sbjct: 343 -IYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLEN 401
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ +L E ++ Y++ G ++K L+V + +K A L+ ++++G +K R
Sbjct: 402 IQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQ 461
Query: 380 YWAAVKVYEQLISQGCIPGQ-----------------------------------VTYAS 404
A + +++++ G +P + V Y +
Sbjct: 462 MENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGA 521
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
++ A C+ +A +VF ++ G + Y +M+ + + G + A L+ M+ G
Sbjct: 522 LLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHG 581
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+ Y S + R+ + +V + M +K+ + +YTT+I + A + D +
Sbjct: 582 FHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAI 641
Query: 525 KFYNEFRMNGGVIDRAIAG-IMVGVFSKLSQIEELVKLLQDMKSE 568
Y + + +G +D A++ ++ G+ S SQ L + +Q + +E
Sbjct: 642 SCYEQAKASGLQLDSALSNCLLSGLISCASQNSTLGEKIQAISAE 686
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/480 (17%), Positives = 212/480 (44%), Gaps = 6/480 (1%)
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNV-LPDAHTCSRLVASCVR 164
EA + +P LI +++ + V+ +E+ + L +A CS +++
Sbjct: 155 EAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCS-IISGYAS 213
Query: 165 ARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGC 223
A + A + F + + + +NS + Y + + + +M+ G + G
Sbjct: 214 AGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGL 273
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y ++ + +I D EK + F K+ L T + Y + K+G +AL
Sbjct: 274 YTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAAT---YGCIVKLFTKAGNMAKALDILE 330
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+M + G+ + IYA ++ +A + A +++++ G+ D LV + + G
Sbjct: 331 EMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAG 390
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
++K L V+E+++ +L + +I++G+ K A++V++++ + G PG V+Y
Sbjct: 391 RMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYN 450
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
S+++ + A + EM G +Y+++ Y + G + A + +MK +
Sbjct: 451 SLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKE 510
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
++ Y +L+ ++ +++ ++++++ + ++++Y T++ + R E
Sbjct: 511 NLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKA 570
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ + +G +D + + EE+ + L M+ + +++ R Y + ++
Sbjct: 571 RDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHG 630
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 199/436 (45%), Gaps = 5/436 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAF--NSAMGGYNKLHMYYSTIL 207
PD T ++ V +CV A A +L+ DG A AF N + G K +
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++++M +V + Y +++ + K GD E L+ + L + Y +L
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVIT---YNVLLS 266
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L ++GR E +M + ++ D Y+ L + + + LF+E+ +KG+
Sbjct: 267 GLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKI 326
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
C L+ ++G + K +V++++ N+ L + I ++NG+ + A ++
Sbjct: 327 GAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIF 386
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+Q+ S+ P +TY ++IN ++ ++A + IEM++ G + V +++++ YG+
Sbjct: 387 QQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRA 446
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ +++ M+ KG +PNV Y S+++ + + + + +M + V P Y
Sbjct: 447 GQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVY 506
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+I AY D + + +G +++ K SQI E +LL +++
Sbjct: 507 NAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRN 566
Query: 568 EGTKLDERLYHSAMNA 583
G D Y++ ++A
Sbjct: 567 YGLAPDVISYNTLISA 582
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 166/345 (48%), Gaps = 6/345 (1%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y ++ L K+G +A+K F +M EK ++ + Y ++I +++ L+ +
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250
Query: 322 EKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIV-NGFSKRR 378
G+ P V VL+ G + +T V++ M + K+ + D + +I+ +G S+
Sbjct: 251 RHGL--KPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKM-VPDGFTYSILFDGHSRTG 307
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ ++E+ + +G G T + ++N C+ SKAE+V + G + V Y+
Sbjct: 308 DSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYN 367
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ Y + G + A + +MK++ P+ YN+L++ G+ + + + L EME+
Sbjct: 368 TLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKN 427
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
V P ++ T+I AY RA + + C ++ + G + G +V F K +I E
Sbjct: 428 GVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEA 487
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
V +L DM + ++Y++ ++A + G QA L + + +
Sbjct: 488 VAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSS 532
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 187/424 (44%), Gaps = 6/424 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ ++ L G+ + + E A A + + P+ T +L ++ +++
Sbjct: 256 PNVITYNVLLSGLCRAGRMGETAAVLDEMASR--KMVPDGFTYSILFDGHSRTGDSQTML 313
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGY 196
SL E+ V A+TCS L+ + K A +LQ + G + + +N+ + GY
Sbjct: 314 SLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGY 373
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
++ ++++MKS I D Y ++ K+ + L +E + ++
Sbjct: 374 CQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNP-- 431
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
S + L D+ G++G+ + DM+EKG+ + Y S++ +F ++ A +
Sbjct: 432 -SVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAI 490
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ K +L +V ++ YIE G ++ + E MK++ + S ++ G K
Sbjct: 491 LDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCK 550
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A ++ + L + G P ++Y ++I+A C + +A ++ EM + G
Sbjct: 551 QSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRT 610
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y + + G GR+ + L +M K P IYN ++D + + +VE L KEM
Sbjct: 611 YRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMS 670
Query: 497 RRKV 500
+ +
Sbjct: 671 DKGI 674
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 172/429 (40%), Gaps = 34/429 (7%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ +N + G + T V ++M S +V D Y + + + + GDS+ + +LF
Sbjct: 258 VITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFE 317
Query: 246 E--------------------CKSRKLDSTP------------FSTHMYKILCDSLGKSG 273
E CK K+ +T +Y L + + G
Sbjct: 318 ESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIG 377
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
A F+ MK + I D Y +LI + + A +L E E+ G+ E
Sbjct: 378 DLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFN 437
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ 393
L+ Y G +EK ++ M+ LK + +IVN F K AV + + + +
Sbjct: 438 TLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIK 497
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
+PG Y +II+AY +A + +M+ G +V Y+ ++ K +I +A
Sbjct: 498 DVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEA 557
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
L+ ++ G P+V YN+L+ N + +L KEM + + P +Y + S+
Sbjct: 558 EELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSS 617
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
A Y + V I IMV ++K + ++ L ++M +G +
Sbjct: 618 LGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVG 677
Query: 574 ERLYHSAMN 582
+ Y S N
Sbjct: 678 D--YTSMTN 684
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/506 (22%), Positives = 221/506 (43%), Gaps = 72/506 (14%)
Query: 107 AKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFK----------IYNVLPDAHTCS 156
A+ P +PE+ L ++ ++ SIV +D + I NVL H
Sbjct: 27 ARSFPSGKPERE--HLTPDFVRRADLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVH--G 82
Query: 157 RLVASCVRA--RKFKIANTLLQVFITDGEIA-----LLAFNSAMGGYNKLHMYYSTILVY 209
+++ S V A R K+ T + F GE A + +N M Y ++
Sbjct: 83 QVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIH 142
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
E+M AGI ++ + ++ ++ + ++ F K ++ H + IL D L
Sbjct: 143 EEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKP---DLHTFLILVDCL 199
Query: 270 GKSGRAFEALKFFRDMKEKGILE-DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
K+G +A + F +M G + D +++ +++ + VK A E+F + E+ G
Sbjct: 200 CKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCG---- 255
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
+ + + T+ ++G +K A+KV +
Sbjct: 256 ----------FPPDAIAYNTM---------------------IDGLAKAGHAQEALKVLD 284
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++++ C+P +VTY ++N+ C+ +AE++F M GF V Y+S++ + K+G
Sbjct: 285 NMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSG 344
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
R+++A L +M G P+V + ++D ++ N Q K ++EM R P+ V+YT
Sbjct: 345 RMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYT 404
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVI------DRAIAGIMVGVFSKLSQIEELVKLL 562
T+I ++ + N FR+ G+I D ++ F KL +++E +LL
Sbjct: 405 TIIQGLSKIG------RVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLL 458
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAG 588
++ + + +LY S + L D G
Sbjct: 459 DELDKCSSSPNLQLYSSLVKGLCDGG 484
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 119/566 (21%), Positives = 220/566 (38%), Gaps = 55/566 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + +LK + +E A + + + +K F P+ +I L ++ +
Sbjct: 223 PDRALHTAMVRTLLKAKRVKE-AREVFGQMEKCG-FPPDAIAYNTMIDGLAKAGHAQEAL 280
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ ++ +P T LV S +A + A L +V G + + S + G+
Sbjct: 281 KVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGF 340
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----CKSRK 251
K ++++M AG D + +++ K G+ E+ A F E CK
Sbjct: 341 AKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNV 400
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
+ Y + L K GR A + + M G D Y L+ F + +
Sbjct: 401 V--------TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLD 452
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD-VVESMKNAKLKISDCISCAI 370
A +L E ++ + ++ LV + G VE TLD + E K A + + C+I
Sbjct: 453 EAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSI 512
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGC----------------------------------- 395
+ G K A +++++++S+GC
Sbjct: 513 IVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMV 572
Query: 396 --IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
+P VTY + C+I +A K+ E +G++ VVAY+++ G++ A
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA 632
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ L +M +G P+ Y +++ + K L K + EM + P +YT ++ A
Sbjct: 633 VSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQA 692
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRA-IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
A D + G ++ I ++ F K +++ +KL +DM S G
Sbjct: 693 LCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVP 752
Query: 573 DERLYHSAMNALRDAGLQMQAQWLQQ 598
S + L +G +AQ L Q
Sbjct: 753 TAVTSASLFDGLVRSGKTEKAQELLQ 778
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 189/496 (38%), Gaps = 88/496 (17%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELA--YDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
P++ + S +HG K + +E +D EA +RP+ T ++I L +S ++
Sbjct: 328 PNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG----YRPDVITHTVMIDGLCKSGNFEQ 383
Query: 136 IVSLSEDFKIYNVLPDAHTCSRL---------VASCVRARKFKIA-----NTLLQVFITD 181
E+ P+ T + + VA+ R K IA +++ + + D
Sbjct: 384 AAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLD 443
Query: 182 GEIALLAFNSAMGGYNKLH--------MYYSTIL---------------VYEKMKSAGIV 218
G L + A ++L YS+++ ++E+ K+A
Sbjct: 444 GFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAEN 503
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKS--GR 274
LD G C I+ K G ++ +F S K D+T Y IL + L +S R
Sbjct: 504 LDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDAT-----TYNILINGLCRSRENR 558
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
A D++ G L D Y L I EV A ++ +EA +G D
Sbjct: 559 VERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTA 618
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
L +G V++ + + + M C I+NG K + A K ++++I +G
Sbjct: 619 LCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKG 678
Query: 395 ---------------CIPGQV---------------------TYASIINAYCRIALYSKA 418
C G V Y ++I+ +C+ A
Sbjct: 679 QKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAA 738
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
K+F +M +G V +S+ ++G+ A L+ +M A G P+ + +++D
Sbjct: 739 LKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDG 798
Query: 479 HGRAKNLRQVEKLWKE 494
++ ++ KL +E
Sbjct: 799 LRKSDESGKLLKLVQE 814
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 232/506 (45%), Gaps = 10/506 (1%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A D + + +++ +P + L+ +++ + S F+ +LP+ T + L+
Sbjct: 97 ALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILI 156
Query: 160 ASCVRARKFKIANTLLQ-VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
V+ R+F A LL ++ D + + ++ + + G K S + V+++M G+V
Sbjct: 157 KISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLV 216
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCDSLGKSGRAF 276
D CY +++ ++K GD + ++ R + + ++ Y ++ + L K GR
Sbjct: 217 PDVMCYNIMIDGFFKRGDYVQGKEIW----ERLVKGSCVYPNVVTYNVMINGLCKMGRFD 272
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
E+L+ + MK+ D Y+SLIC + V A E++KE ++ ++ D L+
Sbjct: 273 ESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALL 332
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGC 395
+ G ++++ ++ M K + +S I + G + R A+ V+E L +G
Sbjct: 333 NGFCRAGKIKESFELWVMM--GKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGS 390
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
TY +I+ C+ +KA K+ E + G AYSS+V K GR+ +A+
Sbjct: 391 GADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALG 450
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
+V +M GCE + + N L++ RA L + ++EME + +P VSY T+I+
Sbjct: 451 IVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLC 510
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+A F F E D +++ + +I+ + L + + +G + D
Sbjct: 511 KAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVT 570
Query: 576 LYHSAMNALRDAGLQMQAQWLQQNFE 601
+++ M+ L AG A L N +
Sbjct: 571 MHNILMHGLCSAGKIEDALLLYSNMK 596
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 138/308 (44%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y I L ++ + EA+ + ++ +G D + Y LI + A ++ KEA+
Sbjct: 362 YNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAK 421
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ G D +V ++G V++ L +V M ++S + ++NGF +
Sbjct: 422 DGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLE 481
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+ + ++ ++GC P V+Y ++IN C+ +S A EM +K + ++ YS ++
Sbjct: 482 EAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLM 541
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ +I A+ L ++ KG EP+V ++N LM A + L+ M++
Sbjct: 542 DGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCL 601
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ V++ T++ +ARE +M + NG D I + +I + + L
Sbjct: 602 PNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIAL 661
Query: 562 LQDMKSEG 569
D G
Sbjct: 662 FDDALKNG 669
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 134/332 (40%), Gaps = 8/332 (2%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+ IR L +++K + +S+ E + D+ T L+ + A +L+
Sbjct: 364 IFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDG 423
Query: 182 GE-IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G+ + A++S + G +K + + +M G L ++ + + E+
Sbjct: 424 GDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEA 483
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
F E +++ T S Y L + L K+ R +A F ++M EK D Y+ L
Sbjct: 484 ICFFREMETKGCSPTVVS---YNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLL 540
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVESMKNA 358
+ ++ +A L+++ KG+ +P+V + +LM+ G +E L + +MK +
Sbjct: 541 MDGLCQGKKIDMALNLWRQVLVKGL--EPDVTMHNILMHGLCSAGKIEDALLLYSNMKQS 598
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+ +++G K R A ++ + G P ++Y + C S
Sbjct: 599 NCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDG 658
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+F + + G + + +V K G +
Sbjct: 659 IALFDDALKNGILPTSITWYILVRAVLKLGPL 690
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/536 (22%), Positives = 230/536 (42%), Gaps = 16/536 (2%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I+L D +P F L G++ + +L Y + ++ + R + + +LI
Sbjct: 64 IDLFSDMLRSRPLPSVVDF-CKLMGVVVRMERPDLVISLYQKMER-KQIRCDIYSFTILI 121
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGE 183
+ K +S + PD T + L+ CV R + N Q+F T
Sbjct: 122 KCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCR 181
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ F + M G + + + ++M G+ Y I++ KIGD+ V+AL
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDT--VSAL 239
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
L K ++ + +Y + DSL K GR +A F +M+EKGI D Y S+I
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
F S AE+L +E E+ + D L+ +++EG + ++ + M + +
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
++++GF K+ AA ++ + ++GC P +T+ ++I+ YC ++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM + G Y++++ + G + A+ L+ +M + G P++ ++L+D
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 484 NLRQVEKLWKEMERRK-----------VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
L+ +++K M++ K V PD +Y +IS +F + Y E
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G V D M+ K S+++E ++ M S+ + + + +N AG
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/469 (19%), Positives = 206/469 (43%), Gaps = 18/469 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + + + GM K T A D + +++ P +I L + +
Sbjct: 217 PTQITYGTIVDGMCKIGDTVS-ALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGG 195
+L + + + PD T + ++ + ++ A LLQ + + +I+ ++ +N+ +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML-ERKISPDVVTYNALINA 334
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K ++ +Y++M GI+ ++ Y +++ + K + +F ++
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ + L D + R + ++ +M E G++ D + Y +LI F + ++ A +
Sbjct: 395 LIT---FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK--LKISDCISCA---- 369
L +E G+ D C L+ + G ++ L++ + M+ +K L S +
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 370 -----IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++G + A ++YE++ +G +P +TY+S+I+ C+ + +A ++F
Sbjct: 512 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M K F VV +++++ Y K GR+ D + L +M +G N Y +L+ + N
Sbjct: 572 MGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+ +++EM V PD ++ +++ E V + +M+
Sbjct: 632 INGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/525 (20%), Positives = 220/525 (41%), Gaps = 28/525 (5%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F++ LHG+ + + E A + +++ + RP T L+ L + + V
Sbjct: 147 PDVVTFNTLLHGLCVEDRVSE-ALNLFHQMFE-TTCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL--LQVFITDGEIA-----LLAFN 190
+L + ++ D +++ + KI +T+ L + EI+ ++ ++
Sbjct: 205 ALLD-----RMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYS 259
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ + K + ++ +M+ GI D Y ++ + G L E R
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
K+ + Y L ++ K G+ FEA + + +M +GI+ + Y+S+I F +
Sbjct: 320 KISPDVVT---YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
AE +F KG + L+ Y ++ ++++ M L +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ--- 427
++GF AA+ + +++IS G P VT ++++ C A ++F MQ+
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 428 --------KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
G + V Y+ +++ G+ +A L +M +G P+ Y+S++D
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+ L + +++ M + +P+ V++TT+I+ Y +A D ++ + E G V +
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ F K+ I + + Q+M S G D + + L
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 110/506 (21%), Positives = 204/506 (40%), Gaps = 65/506 (12%)
Query: 114 RPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
RP S + L+ +V+ ++ D ++SL + + + D ++ + L+ K A
Sbjct: 74 RPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFA 133
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKL-HMYYSTILVYEKMKSAGIVLDSGC------Y 224
L F G+I L + + +N L H V E + + ++ C +
Sbjct: 134 ---LSTF---GKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF 187
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
+M + G + AL L T + Y + D + K G AL R
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT---YGTIVDGMCKIGDTVSALDLLRK 244
Query: 285 MKE-KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
M+E I+ + IY+++I S A+ LF E +EKG+ D
Sbjct: 245 MEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD--------------- 289
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
L SM + GF + A ++ ++++ + P VTY
Sbjct: 290 -----LFTYNSM---------------IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
++INA+ + + +AE+++ EM +G + YSSM+ + K R+ A + M K
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
GC PN+ +N+L+D + AK + +L EM + D +Y T+I + + +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVF---SKLSQIEELVKLLQDMKSE--------GTKL 572
+ E +G D ++ KL E+ K++Q K + G +
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 573 DERLYHSAMNALRDAGLQMQAQWLQQ 598
D + Y+ ++ L + G ++A+ L +
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYE 535
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/233 (18%), Positives = 99/233 (42%), Gaps = 5/233 (2%)
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
S + +GF + +G A+ ++ ++ +P V + ++ R+ ++ +M+
Sbjct: 47 SLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKME 106
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+K + +++ ++ + ++ A+ K+ G P+V +N+L +HG R
Sbjct: 107 RKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTL--LHGLCVEDR 164
Query: 487 QVE--KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
E L+ +M P+ V++TT+++ R V + +G + G
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA-MNALRDAGLQMQAQWL 596
+V K+ + LL+ M+ + + +SA +++L G AQ L
Sbjct: 225 IVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 132/583 (22%), Positives = 249/583 (42%), Gaps = 63/583 (10%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE------FRPEKS 118
+EL + + VP A + + ++G+ ++L+ A KL E +P
Sbjct: 334 LELLDEMEKRNLVPSAVSYGAMINGLC---HCKDLSL-----ANKLLEKMTFSGLKPNVV 385
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCV-RARKFKIANT-LLQ 176
LI + + L + V PD C + SC+ +A K + A+T LL+
Sbjct: 386 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIF-CYNAIISCLSKAGKMEEASTYLLE 444
Query: 177 VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
+ + + F + + GY+K +++M G++ ++ Y ++ ++K G+
Sbjct: 445 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 504
Query: 237 SEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
+ ++F + + D S ++ +L K+GR EALK F ++KEKG++ D
Sbjct: 505 LMEALSIFRHLHALGVLPDVQTCSAFIHGLL-----KNGRVQEALKVFSELKEKGLVPDV 559
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
Y+SLI F EV+ A EL E KG+ + + LV + G +++ + +
Sbjct: 560 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 619
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
M L+ +++G+ K A ++ ++ S+G P Y ++++ C+
Sbjct: 620 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 679
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
KA +F EM QKGF +++++++ Y K+ +I++A L +M AK P+ Y +
Sbjct: 680 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 738
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRK----------------------------------- 499
++D H +A + + L+KEM+ R
Sbjct: 739 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 798
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
V PD+V+Y VI A+ + K +E G + I +++ K + E
Sbjct: 799 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 858
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
KLL +M G K + + + +AG +A + FEG
Sbjct: 859 KLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV---FEG 898
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 207/496 (41%), Gaps = 40/496 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PDA F +F+ G K + E A Y++E P +LI ++ +
Sbjct: 452 PDAVTFGAFILGYSKTGKMTE-AAKYFDEMLD-HGLMPNNPLYTVLINGHFKAGNLMEAL 509
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
S+ VLPD TCS + ++ + + A
Sbjct: 510 SIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEA-------------------------- 543
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
+ V+ ++K G+V D Y ++ + K G+ EK L E + + F
Sbjct: 544 --------LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 595
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+Y L D L KSG A K F M EKG+ D Y+++I + V A LF
Sbjct: 596 ---IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 652
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E KG+ V LV +EG +EK +++ M + + +++G+ K
Sbjct: 653 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN-TLIDGYCKS 711
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A ++++++I++ +P VTY ++I+ +C+ +A +F EMQ++ V Y
Sbjct: 712 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 771
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+S++ Y K G+ + L KM AKG +P+ Y ++ H + NL + KL E+
Sbjct: 772 TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 831
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ + + +I+A + + K +E G A +V F + +++E
Sbjct: 832 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDE 891
Query: 558 LVKLLQDMKSEGTKLD 573
++ + +KS G D
Sbjct: 892 ATRVFEGVKSLGLVPD 907
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/488 (20%), Positives = 201/488 (41%), Gaps = 33/488 (6%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T ++ L ++K+ + E+ + + PD + CS L+ +R +
Sbjct: 207 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 266
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
V ++ G I L+ +N + G K + + M + G +S +C ++E Y +
Sbjct: 267 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 326
Query: 234 IGDSEKVAALFLECKSRKLDSTPFS--------------------------------THM 261
+ + L E + R L + S +
Sbjct: 327 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 386
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L GR EA + M G+ D Y ++I + +++ A E +
Sbjct: 387 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 446
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+G+ D +L Y + G + + + M + L ++ + ++NG K
Sbjct: 447 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 506
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+ ++ L + G +P T ++ I+ + +A KVF E+++KG V YSS++
Sbjct: 507 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 566
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ + K G + A L +M KG PN++IYN+L+D ++ ++++ KL+ M + +
Sbjct: 567 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 626
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD V+Y+T+I Y ++ ++E G + +V K +E+ + L
Sbjct: 627 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 686
Query: 562 LQDMKSEG 569
++M +G
Sbjct: 687 FREMLQKG 694
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 161/367 (43%), Gaps = 20/367 (5%)
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
++++Y ++G ++ A +F K+ DS S I C+SL R M
Sbjct: 162 LIDSYKRMGMLDEAANVFFVAKN---DSILISL----IRCNSL-------------RSMG 201
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
EKG++ + Y + + A+ F+E ++ G+ D C L+ ++ EG ++
Sbjct: 202 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 261
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ L + + M + + I+ +++G K A ++ + +I+ GC P T+ +I
Sbjct: 262 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLI 321
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
YCR +A ++ EM+++ V+Y +M+ + A L+ KM G +
Sbjct: 322 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 381
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
PNV +Y++L+ + + + +L M V PD Y +IS ++A + + +
Sbjct: 382 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 441
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
E + G D G + +SK ++ E K +M G + LY +N
Sbjct: 442 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 501
Query: 587 AGLQMQA 593
AG M+A
Sbjct: 502 AGNLMEA 508
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 192/442 (43%), Gaps = 19/442 (4%)
Query: 39 PFVTVNPSSIINHRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQE 98
P TV +IN F A + + R H +PD + +F+HG+LK+ + QE
Sbjct: 490 PLYTV----LINGHF---KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQE 542
Query: 99 LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRL 158
A ++E K+ P+ T LI + + + L ++ + + P+ + L
Sbjct: 543 -ALKVFSELKE-KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNAL 600
Query: 159 VASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGI 217
V ++ + A L G E + +++ + GY K ++ +M S G+
Sbjct: 601 VDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV 660
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM-YKILCDSLGKSGRAF 276
S Y ++ K GD EK LF R++ F+T + + L D KS +
Sbjct: 661 QPHSFVYNALVHGCCKEGDMEKAMNLF-----REMLQKGFATTLSFNTLIDGYCKSCKIQ 715
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
EA + F++M K I+ D Y ++I +++ A LFKE +E+ ++ D L+
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 775
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
Y + G + + E M +K + ++ K A K+ ++++ +G +
Sbjct: 776 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 835
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
+ +I A C+ ++A K+ EM + G + A S++V + + G++ +A +
Sbjct: 836 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV 895
Query: 457 VAKMKAKGCEPNVWIYNSLMDM 478
+K+ G P+ +L+D+
Sbjct: 896 FEGVKSLGLVPDT---TTLIDL 914
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 202/454 (44%), Gaps = 8/454 (1%)
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA- 185
LV+SK + +++ LS+ + + P+ C+ L+ + A ++ + G +
Sbjct: 95 LVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPD 154
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+ F + G L ++K+ + G D Y ++ K+G++ L
Sbjct: 155 TITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLL- 213
Query: 246 ECKSRKLDSTPFSTH--MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
+++D + MY + DS+ K EA F +M KGI D Y++LI
Sbjct: 214 ----QRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISG 269
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
F + ++K A +LF + + + D LV + ++G +++ V + M +K +
Sbjct: 270 FCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPN 329
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
++++G+ + A ++ + G P +Y+ +IN +C+I + +A +F
Sbjct: 330 FVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFK 389
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM +K VV YSS++ K+GRI A+ LV +M +G PN+ YNS++D +
Sbjct: 390 EMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTH 449
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ + L + + + PD +Y+ +I ++ + + K + + + G +D
Sbjct: 450 QVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYT 509
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
IM+ F E + LL M+ G D + Y
Sbjct: 510 IMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 177/423 (41%), Gaps = 6/423 (1%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VPD F + G+ Q Q+ A+ ++++ L F ++ + LI L + + +
Sbjct: 152 VPDTITFTTLSKGLCLKGQIQQ-AFLFHDKVVAL-GFHFDQISYGTLIHGLCKVGETRAA 209
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+ L + V P+ + ++ S + + A L ++ G ++ +++ + G
Sbjct: 210 LDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISG 269
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ L I ++ KM I D + ++ A+ K G ++ +F + +
Sbjct: 270 FCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPN 329
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
F T Y L D +A F M + G+ D Y+ +I F I + A
Sbjct: 330 -FVT--YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
LFKE K ++ D L+ + G + L +V+ M + + + C +I++
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALC 446
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A+ + + +G P TY+ +I C+ A KVF ++ KG++ V
Sbjct: 447 KTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVY 506
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
AY+ M+ + G +A+ L++KM+ GC P+ Y ++ + EKL +EM
Sbjct: 507 AYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566
Query: 496 ERR 498
R
Sbjct: 567 IAR 569
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 153/394 (38%), Gaps = 41/394 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ +++ + M K E A+D ++E P+ T LI K +
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNE-AFDLFSEMVS-KGISPDVVTYSALISGFCILGKLKDAI 280
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L + N+ PD +T + LV + + K K T+ + + G + + +NS M GY
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ ++ M G+ D Y ++ + KI ++ LF E + +
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y L D L KSGR AL+ M ++G+ + Y S++ + +V A L
Sbjct: 401 VT---YSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIAL 457
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ ++KG P++ +L+ +GL + K+ D
Sbjct: 458 LTKFKDKGF--QPDISTYSILI---KGLCQSG------------KLED------------ 488
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A KV+E L+ +G Y +I +C L+++A + +M+ G
Sbjct: 489 ------ARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKT 542
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
Y ++ K A L+ +M A+G N +
Sbjct: 543 YEIIILSLFKKDENDMAEKLLREMIARGLPLNFY 576
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 185/406 (45%), Gaps = 18/406 (4%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ +++ + Y KL S I ++++MK + Y ++ Y+K+G EK LF E
Sbjct: 234 ITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEE 293
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
K T ++ Y L LGK+GR EA +++M G+ D +L+
Sbjct: 294 MKRAGCSPTVYT---YTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGK 350
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVE------SMKNA 358
+ + EEL E G R C V+ Y + + L E V E MK
Sbjct: 351 VGRL---EELTNVFNEMGTWR----CTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKAD 403
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+ S+ +++G+ K A+ + E++ +G P Y S+INA + Y A
Sbjct: 404 GVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAA 463
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
++F E+++ + Y+ M+ +GK G++ +A+ L +MK +G P+V+ YN+LM
Sbjct: 464 NELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSG 523
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+A + + L ++ME T D S+ +++ + R ++ + + G D
Sbjct: 524 MVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPD 583
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++G F+ EE +L+++MK +G + D Y S ++A+
Sbjct: 584 GVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDAV 629
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 140/296 (47%), Gaps = 2/296 (0%)
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
P + + L+ + V A +F +A+ + ++LM ++EG EK +V
Sbjct: 162 PVVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYT 221
Query: 354 SMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
M N D I+ A+++ + K +A+++++++ P + Y +++ Y ++
Sbjct: 222 EMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKV 281
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
KA +F EM++ G V Y+ ++ GK GR+ +A L M G P+V
Sbjct: 282 GKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFL 341
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA-YNRAREFDMCVKFYNEFR 531
N+LM++ G+ L ++ ++ EM + TP VSY TVI A + ++++ +
Sbjct: 342 NNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMK 401
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
+G I++ + K +++E+ + LL++M +G Y S +NAL A
Sbjct: 402 ADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKA 457
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 160/369 (43%), Gaps = 5/369 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P + L+ + K + + L E+ K P +T + L+ +A + + A
Sbjct: 265 QPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYD 324
Query: 174 LLQVFITDGEIALLAF-NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L + +TDG + F N+ M K+ V+ +M + Y +++A +
Sbjct: 325 LYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALF 384
Query: 233 KI-GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ +V++ F + K+ + + F+ Y IL D K+ R +AL +M EKG
Sbjct: 385 ESKAPVSEVSSWFDKMKADGVSPSEFT---YSILIDGYCKTNRVEKALLLLEEMDEKGFP 441
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
P+ Y SLI + + A ELFKE +E V ++ + + G + + +D+
Sbjct: 442 PCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDL 501
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
MKN A+++G K A + ++ GC ++ I+N + R
Sbjct: 502 FNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFAR 561
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ +A ++F M+ G V Y++++ + G +A L+ +MK KG E +
Sbjct: 562 TGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAIT 621
Query: 472 YNSLMDMHG 480
Y+S++D G
Sbjct: 622 YSSILDAVG 630
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 100/220 (45%), Gaps = 5/220 (2%)
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ E ++N + + + +V + + A+ V+ Q + C P TY S+I
Sbjct: 149 IQEVVRNTYVSVGPVVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLM 208
Query: 411 RIALYSKAEKVFIEMQQKGFDKC---VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+ + K +V+ EM +G C + YS++++ Y K GR A+ L +MK +P
Sbjct: 209 QEGQHEKVHEVYTEMCNEG--DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQP 266
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
IY +L+ ++ + + + L++EM+R +P +YT +I +A + Y
Sbjct: 267 TEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLY 326
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+G D ++ + K+ ++EEL + +M +
Sbjct: 327 KNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGT 366
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 200/468 (42%), Gaps = 10/468 (2%)
Query: 77 VPDAKKFDSFLHGML--KDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
+PD + L +L +DP L + ++ P+ LI ++ D
Sbjct: 187 LPDLASYSHLLASLLNTRDPPDAALLERLLGDLRE-SRLEPDAPLFSDLISAFARAALPD 245
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSA 192
+ + L + + P ++ + L+++ A + A L F GEI A+N+
Sbjct: 246 AALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNAL 305
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY ++ + V ++M G+ D Y +++AY + G E L E ++
Sbjct: 306 LKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEA--- 362
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D S++++ + G +A R+M+ G+ D Y +I +F +
Sbjct: 363 DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGH 422
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A + F + E+G+ D L+ + + G ++ ++ E M+ + ++N
Sbjct: 423 AMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMIN 482
Query: 373 GFSKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
++ +W V+ + ++ QG +P +TY ++++ Y R Y +A M+ G
Sbjct: 483 LLGEQE-HWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLK 541
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
Y ++V Y + G A+ +V MKA G E ++ + NSL++ G + + + +
Sbjct: 542 PSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSV 601
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+ M + PD ++YTT++ A R +FD Y E +G DR
Sbjct: 602 LQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDR 649
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 194/450 (43%), Gaps = 20/450 (4%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA-----FNSAMGGYNKLH 200
++ LPD + S L+AS + R A LL+ + D + L F+ + + +
Sbjct: 184 HDFLPDLASYSHLLASLLNTRDPPDA-ALLERLLGDLRESRLEPDAPLFSDLISAFARAA 242
Query: 201 MYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE------CKSRKLDS 254
+ + + + ++ G+ S ++ A G + ALFLE K R
Sbjct: 243 LPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPR---- 298
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
T Y L + G A + +M + G+ D + Y+ L+ ++ + A
Sbjct: 299 ----TRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
L KE E G+ V +++ + + G +K V+ M+ + ++ +++ F
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A+ + ++ +G P VT+ ++I+A+C+ + +A ++F EM++
Sbjct: 415 GKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGT 474
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
Y+ M+ + G+ ++++MK +G PN+ Y +L+D++GR+ ++ +
Sbjct: 475 TTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEA 534
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+ + P Y +++AY + D + + +G + + ++ F + +
Sbjct: 535 MKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRR 594
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ E +LQ M+ G + D Y + M AL
Sbjct: 595 VVEAFSVLQFMRENGLRPDVITYTTLMKAL 624
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 145/338 (42%), Gaps = 9/338 (2%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE- 319
++ L + ++ AL+ + G+ + +LI + + V AE LF E
Sbjct: 230 LFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEF 289
Query: 320 ---AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E K R LK Y+ G ++ V++ M + + +V+ ++
Sbjct: 290 FLAGEIKPRTRAYNALLK---GYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYT- 345
Query: 377 RRGYWAAVKVY-EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
R G W + ++ +++ + G P ++ I+ + + KA V EMQ G
Sbjct: 346 RAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRH 405
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+ M+ +GK + AM KM+ +G EP+V +N+L+D H + + +L++EM
Sbjct: 406 FYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEM 465
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
P +Y +I+ ++ +E + G V + +V V+ + +
Sbjct: 466 RESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRY 525
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+E + ++ MK++G K +YH+ +NA GL A
Sbjct: 526 KEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHA 563
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/477 (23%), Positives = 210/477 (44%), Gaps = 20/477 (4%)
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
+ L +++ L ++K + +S+ K P ++T + ++ ++ + + L
Sbjct: 160 ADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNE 219
Query: 178 FITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG 235
+G+ + +++ + + KL S I ++++MK G+ + Y I+ Y+K+G
Sbjct: 220 MCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLG 279
Query: 236 DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
EK L E K + + + Y L +GK+G+ EA F +M ++G D
Sbjct: 280 RVEKALGLVQEMKEK---GCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVV 336
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVE 353
+ +LI + A +LF+E E C V+ Y + + L E E
Sbjct: 337 LINNLINLLGKAGRLADAIKLFEEMESLQ-------CTPNVVTYNTVIKALFESKARASE 389
Query: 354 S------MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+ MK + S +++GF K A+ + E++ +G P Y S+IN
Sbjct: 390 AFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLIN 449
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
A + Y A ++F E+++ Y+ M+ GK GR+ +A+ L +MK GC P
Sbjct: 450 ALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNP 509
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
+V+ YN+LM R + L + ME TPD S+ +++ + R ++ +
Sbjct: 510 DVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMF 569
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + D ++G S+ EE KL+++M S+G + D Y S + A+
Sbjct: 570 TRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAV 626
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 179/394 (45%), Gaps = 5/394 (1%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
++M + V+ +I++ K K ++F + K RK T ++ Y + L
Sbjct: 148 QEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPT---SNTYNSMILML 204
Query: 270 GKSGRAFEALKFFRDMKEKG-ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
+ G + + + +M +G L D Y++LI +F + A LF E +E G+
Sbjct: 205 MQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPT 264
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
++ ++ +Y + G VEK L +V+ MK ++ ++ G K A ++
Sbjct: 265 AKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFM 324
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKT 447
++ +GC P V ++IN + + A K+F EM+ VV Y++++ A++
Sbjct: 325 NMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESK 384
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
R +A KMK G P+ + Y+ L+D + + + L +EM+ + P +Y
Sbjct: 385 ARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAY 444
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
++I+A +A+ ++ + + E R N G + +M+ K ++ E V L +MK
Sbjct: 445 CSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKK 504
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
G D Y++ M+ + G+ +A L + E
Sbjct: 505 LGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTME 538
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 167/338 (49%), Gaps = 9/338 (2%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
DST T+M I C L ++G E K ++M + P+ + ++ V
Sbjct: 123 DST---TYMALIHC--LDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNK 177
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIV 371
A +F + + + ++LM ++EG EK ++ M N + D ++ A++
Sbjct: 178 ALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALI 237
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
F K +A+ +++++ G P Y +I+ Y ++ KA + EM++KG
Sbjct: 238 AAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCA 297
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
V Y+ ++ GK G++ +A + M +GC+P+V + N+L+++ G+A L KL
Sbjct: 298 LTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKL 357
Query: 492 WKEMERRKVTPDKVSYTTVISAY--NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
++EME + TP+ V+Y TVI A ++AR + + +Y + + NG V I++ F
Sbjct: 358 FEEMESLQCTPNVVTYNTVIKALFESKARASEAFL-WYEKMKENGVVPSSFTYSILIDGF 416
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
K +++E+ + LL++M +G Y S +NAL A
Sbjct: 417 CKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKA 454
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 186/444 (41%), Gaps = 6/444 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + ++S + ML E ++ YNE + P+ T LI + + DS +
Sbjct: 192 PTSNTYNSMIL-MLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAI 250
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
SL ++ K + P A + ++ + + + A L+Q G + + + + G
Sbjct: 251 SLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGV 310
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K ++ M G D ++ K G LF E +S L TP
Sbjct: 311 GKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMES--LQCTP 368
Query: 257 FSTHMYKILCDSLGKS-GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y + +L +S RA EA ++ MKE G++ Y+ LI F V+ A
Sbjct: 369 -NVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALL 427
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L +E +EKG P L+ + E ++ + ++ S + ++
Sbjct: 428 LLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLG 487
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K AV ++ ++ GC P Y ++++ R+ + +A + M++ G +
Sbjct: 488 KCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLN 547
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+++ ++ + +TG + A+ + +MK +P+V YN+++ RA + KL KEM
Sbjct: 548 SHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEM 607
Query: 496 ERRKVTPDKVSYTTVISAYNRARE 519
+ D ++Y++++ A + E
Sbjct: 608 NSKGFEYDLITYSSILEAVGKIDE 631
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 169/329 (51%), Gaps = 5/329 (1%)
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
L++++ AG + Y ++ AY + G K +F ++ K+ P + +Y +
Sbjct: 141 LIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIF---EAMKVVCKP-NLVVYNAVI 196
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
D+ K G AL+ FR+M E+G+ D + +LI + + + +F E EE+G+
Sbjct: 197 DACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIA 256
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESM-KNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
RD L+ Y G + ++E+M K++ ++ S +++G++K A+
Sbjct: 257 RDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIA 316
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+++++ +Q P + Y ++++ + R+ + +A + M++ GF K +V Y++++ YG
Sbjct: 317 LFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYG 376
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K G+ R+AM L+ +MK +G PN+ Y++L+D + + R L++++++ + PD V
Sbjct: 377 KQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVV 436
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNG 534
Y+T++ + D + E NG
Sbjct: 437 LYSTLVDGCCKNGSPDEALALLEEMADNG 465
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 164/350 (46%), Gaps = 11/350 (3%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP--SIYASLICSFASITEV 310
D PF + LG SG+ + +K F M + L + +++I S +
Sbjct: 84 DDLPF-------IVRELGHSGQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRS 136
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A+ +F A G + V L+ Y G + K +++ E+MK K + + A+
Sbjct: 137 DWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMK-VVCKPNLVVYNAV 195
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++ SK Y A++++ +++ QG P ++T+ ++I+A R + + +++F EM+++G
Sbjct: 196 IDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGI 255
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKM-KAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ V Y++++A Y + G++ L+ M K+ G EP+V Y++++D + + +
Sbjct: 256 ARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAI 315
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
L++EM + V PD + Y T++ + R FD G D ++ +
Sbjct: 316 ALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSY 375
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
K + E + LL++MK G + Y + ++A G A L Q+
Sbjct: 376 GKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQD 425
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 146/338 (43%), Gaps = 47/338 (13%)
Query: 145 IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYY 203
+YN + DA C + + A + + + G + FN+ + + + +
Sbjct: 191 VYNAVIDA---------CSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWE 241
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYK 263
++ +M+ GI D Y ++ Y + G AAL +E ++ P S Y
Sbjct: 242 ECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAAL-METMAKSSGIEP-SVITYS 299
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
+ D K G A EA+ F++M+ + + D Y +++ A + A + + EE
Sbjct: 300 TMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEA 359
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G +D ++ Y A+++ + K+ + A
Sbjct: 360 GFAKD-------IVTY----------------------------NALLDSYGKQGKFREA 384
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+ + E++ +G P +TY+++I+AYC+ + A +F ++++ G VV YS++V
Sbjct: 385 MSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDG 444
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
K G +A+ L+ +M G PNV YNSL+D +GR
Sbjct: 445 CCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGR 482
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 189/411 (45%), Gaps = 24/411 (5%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T LI ++ +W+ + + + + D T + L+A+ R + + L
Sbjct: 222 PDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAAL 281
Query: 175 LQVFITDG--EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
++ E +++ +++ + GY KL + + I ++++M++ + D CY +++ +
Sbjct: 282 METMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHA 341
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGI 290
++G+ ++ ++ R ++ F+ + Y L DS GK G+ EA+ +MK++G
Sbjct: 342 RLGNFDEAHSI-----RRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGA 396
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
+ Y++LI ++ + A LF++ ++ G+ D + LV + G ++ L
Sbjct: 397 SPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALA 456
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKR----RGYWAAVKVY-EQLISQGCIPG-QVTYAS 404
++E M + ++ + ++++ + ++ R + ++ + ++ P Q S
Sbjct: 457 LLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQS 516
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+++ + AL A +VF EM + G VV +SS++ + DA L+ M+
Sbjct: 517 LVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAMRV-- 574
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
+ V+ + M R + R E L+ E+ + + T ++ YN
Sbjct: 575 FDGRVYGVTHGLLMGFRIRVWRDAETLFNELT-------TLGHNTAVAFYN 618
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 169/329 (51%), Gaps = 5/329 (1%)
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
L++++ AG + Y ++ AY + G K +F ++ K+ P + +Y +
Sbjct: 142 LIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIF---EAMKVVCKP-NLVVYNAVI 197
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
D+ K G AL+ FR+M E+G+ D + +LI + + + +F E EE+G+
Sbjct: 198 DACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIA 257
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESM-KNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
RD L+ Y G + ++E+M K++ ++ S +++G++K A+
Sbjct: 258 RDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIA 317
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+++++ +Q P + Y ++++ + R+ + +A + M++ GF K +V Y++++ YG
Sbjct: 318 LFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYG 377
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K G+ R+AM L+ +MK +G PN+ Y++L+D + + R L++++++ + PD V
Sbjct: 378 KQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVV 437
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNG 534
Y+T++ + D + E NG
Sbjct: 438 LYSTLVDGCCKNGSPDEALALLEEMADNG 466
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 164/350 (46%), Gaps = 11/350 (3%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP--SIYASLICSFASITEV 310
D PF + LG SG+ + +K F M + L + +++I S +
Sbjct: 85 DDLPF-------IVRELGHSGQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRS 137
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A+ +F A G + V L+ Y G + K +++ E+MK K + + A+
Sbjct: 138 DWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMK-VVCKPNLVVYNAV 196
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++ SK Y A++++ +++ QG P ++T+ ++I+A R + + +++F EM+++G
Sbjct: 197 IDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGI 256
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKM-KAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ V Y++++A Y + G++ L+ M K+ G EP+V Y++++D + + +
Sbjct: 257 ARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAI 316
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
L++EM + V PD + Y T++ + R FD G D ++ +
Sbjct: 317 ALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSY 376
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
K + E + LL++MK G + Y + ++A G A L Q+
Sbjct: 377 GKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQD 426
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 146/338 (43%), Gaps = 47/338 (13%)
Query: 145 IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYY 203
+YN + DA C + + A + + + G + FN+ + + + +
Sbjct: 192 VYNAVIDA---------CSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWE 242
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYK 263
++ +M+ GI D Y ++ Y + G AAL +E ++ P S Y
Sbjct: 243 ECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAAL-METMAKSSGIEP-SVITYS 300
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
+ D K G A EA+ F++M+ + + D Y +++ A + A + + EE
Sbjct: 301 TMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEA 360
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G +D ++ Y A+++ + K+ + A
Sbjct: 361 GFAKD-------IVTY----------------------------NALLDSYGKQGKFREA 385
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+ + E++ +G P +TY+++I+AYC+ + A +F ++++ G VV YS++V
Sbjct: 386 MSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDG 445
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
K G +A+ L+ +M G PNV YNSL+D +GR
Sbjct: 446 CCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGR 483
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 188/411 (45%), Gaps = 24/411 (5%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T LI ++ +W+ + + + + D T + L+A+ R + + L
Sbjct: 223 PDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAAL 282
Query: 175 LQVFITDG--EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
++ E +++ +++ + GY KL + + I ++++M++ + D CY +++ +
Sbjct: 283 METMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHA 342
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGI 290
++G+ ++ ++ R ++ F+ + Y L DS GK G+ EA+ +MK++G
Sbjct: 343 RLGNFDEAHSI-----RRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGA 397
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
+ Y++LI ++ + A LF++ ++ G+ D + LV + G ++ L
Sbjct: 398 SPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALA 457
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKR----RGYWAAVKVYEQLISQGCIPGQVTY--AS 404
++E M + ++ + ++++ + ++ R + ++ + + V Y S
Sbjct: 458 LLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQS 517
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+++ + AL A +VF EM + G VV +SS++ + DA L+ M+
Sbjct: 518 LVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASSLLEAMRV-- 575
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
+ V+ + M R + R E L+ E+ + + T ++ YN
Sbjct: 576 FDGRVYGVTHGLLMGFRIRVWRDAETLFNELT-------TLGHNTAVAFYN 619
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 175/378 (46%), Gaps = 3/378 (0%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+++ + G+ + Y +E Y+K D VA + + + + Y +L
Sbjct: 249 DEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK---EGVACNVVTYTLLIHGF 305
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
G+ EA + F +M+EKGI D +Y S+I VK A LF E +KG++
Sbjct: 306 SNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSA 365
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
L+ + G +E +V M+ + ++ I +++G+ + A+++
Sbjct: 366 HTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVV 425
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ +G Y SI + C++ +A+ + M ++G +++++++ +Y K G
Sbjct: 426 MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN 485
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+A + +M+ KG PN+ YN L+D + + N+++ KL E+E R + PD + T+
Sbjct: 486 FVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTS 545
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+I + DM +K ++E G V + M+ SK + EE KL +MK G
Sbjct: 546 LIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETG 605
Query: 570 TKLDERLYHSAMNALRDA 587
D+ +Y S + +L A
Sbjct: 606 LTPDDTVYSSLVGSLHSA 623
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 128/272 (47%)
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A E F+ E+KG D CL +L G V+ L M N ++++ +++
Sbjct: 174 ALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLD 233
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G KR K+ +++ ++G VTY + I Y + ++ M+++G
Sbjct: 234 GLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVAC 293
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
VV Y+ ++ + G+I +A L +M+ KG E +V++Y S++ + R+ N+++ L+
Sbjct: 294 NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLF 353
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
EM + + P +Y +I +A + + NE + G ++ I ++ + +
Sbjct: 354 DEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCES 413
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++E ++L M+ +G + D Y+S + L
Sbjct: 414 GMVDEALRLQVVMEKKGLESDVFAYNSIASGL 445
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 4/262 (1%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTI 206
++P AHT L+ +A + + A L+ G ++ + FN+ + GY + M +
Sbjct: 361 LIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEAL 420
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
+ M+ G+ D Y I K+ ++ L R + S + L
Sbjct: 421 RLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMS---FTTLI 477
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
D K G EA + FR+M+EKG + + Y LI ++ +K A +L E E +G++
Sbjct: 478 DIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLI 537
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D C L+ +G V+ L + + M L + A+++G SK A K+
Sbjct: 538 PDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKL 597
Query: 387 YEQLISQGCIPGQVTYASIINA 408
Y+++ G P Y+S++ +
Sbjct: 598 YDEMKETGLTPDDTVYSSLVGS 619
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 107/285 (37%), Gaps = 48/285 (16%)
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS--------IINAYCRI 412
+I +CA V+ G V V L+ C + A + Y
Sbjct: 114 EIRHLFNCAAVDD-----GLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVYADN 168
Query: 413 ALYSKAEKVFIEMQQKGF--------------------DKC-------------VVAYSS 439
++ +A + F M++KGF D C V YS
Sbjct: 169 KMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSL 228
Query: 440 MVAMYG--KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+ + G K G + L+ ++ AKG + NV YN+ ++ + + +L V ++ ME+
Sbjct: 229 TIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK 288
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
V + V+YT +I ++ + + + + E R G D + ++ + ++
Sbjct: 289 EGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKR 348
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+ L +M +G Y + ++ + AG AQ L +G
Sbjct: 349 ALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQG 393
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 180/414 (43%), Gaps = 22/414 (5%)
Query: 169 KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
K N +L ++ +++F + G+ K Y I +M G V D+ Y +++
Sbjct: 440 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVI---HEMMGNGFVPDTSTYSEVI 496
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
E LF E K + P + Y IL D K+G +A + +M
Sbjct: 497 GFLCNASRVENAFFLFKEMKGTGV--VP-DVYTYTILIDCFSKAGIIKQAHNWLDEMVRD 553
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G Y +LI ++ +V +A ELF+ KG + L+ Y + G +EK
Sbjct: 554 GCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKA 613
Query: 349 LDVVESMK--------NAKLKISDCIS--------CAIVNGFSKRRGYWAAVKVYEQLIS 392
+ M+ + KI + ++ A+V+G K A + E +
Sbjct: 614 CQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFV 673
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
GC P + Y ++I+ +C+ A +A++VF +M ++G++ V YSS++ K R+
Sbjct: 674 DGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDL 733
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
+ +++KM C PN+ IY ++D + + KL ME + P+ V+YT +I
Sbjct: 734 VLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMID 793
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+ +A + D C++ + E G + +++ ++E LL++MK
Sbjct: 794 GFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMK 847
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/505 (20%), Positives = 222/505 (43%), Gaps = 36/505 (7%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
+F P +I L ++ ++ + + + +P+ T L+ C+ ++
Sbjct: 303 DFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRC 362
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSA---------GIVLDS 221
+L + I +G + FNS + Y K + + +KM+ I++ S
Sbjct: 363 KRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGS 422
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKS--RKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
C + +EK L + K++ F+ + LC GK +A+
Sbjct: 423 ICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFA----RCLC-GFGKFEKAY--- 474
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
K +M G + D S Y+ +I + + V+ A LFKE + G++ D L+ +
Sbjct: 475 KVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCF 534
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ G++++ + ++ M + + +++ + K + A +++E +I++GC P
Sbjct: 535 SKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNV 594
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGF----------------DKCVVAYSSMVAM 443
+TY ++I+ YC+ KA +++ M+ VV Y ++V
Sbjct: 595 ITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDG 654
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K +++DA L+ M GCEPN +Y++L+D +A L + ++++ +M R P+
Sbjct: 655 LCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPN 714
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+Y+++I + + D+ +K ++ N + I M+ SK+++ +E KL+
Sbjct: 715 VYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLML 774
Query: 564 DMKSEGTKLDERLYHSAMNALRDAG 588
M+ +G K + Y + ++ AG
Sbjct: 775 MMEEKGCKPNVVTYTAMIDGFGKAG 799
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 200/471 (42%), Gaps = 55/471 (11%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ ST +I +L + + ++ L ++ K V+PD +T + L+ +A K A+
Sbjct: 485 FVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAH 544
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L + DG E ++ + + + Y K ++E M + G + Y +++ Y
Sbjct: 545 NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGY 604
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKI---------------LCDSLGKSGRAF 276
K G+ EK ++ + R P +KI L D L K+ +
Sbjct: 605 CKSGNIEKACQIY--ARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVK 662
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+A M G + +Y +LI F ++ A+E+F + E+G +P V
Sbjct: 663 DARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGY--NPNV----- 715
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
Y L+++ K+ +L + +KV +++ C
Sbjct: 716 --YTYSSLIDRLF------KDKRLDL--------------------VLKVLSKMLENSCA 747
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P V Y +I+ ++A +A K+ + M++KG VV Y++M+ +GK G++ + L
Sbjct: 748 PNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLEL 807
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+M +KGC PN Y L++ +L + L +EM++ SY VI Y
Sbjct: 808 FREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYK- 866
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
REF + + E NG + +++ F K ++E ++L +++ S
Sbjct: 867 -REFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVIS 916
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 154/382 (40%), Gaps = 12/382 (3%)
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
LV+ +M G+ +D +A K+G + +L K D P +T +Y +
Sbjct: 262 LVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLI-----EKEDFVP-NTILYNKMI 315
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
L ++ EA+ F M+ + + Y L+C + ++ + + +G
Sbjct: 316 SGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCY 375
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK----ISDCISCAIVNG--FSKRRGY 380
+ LV Y + +++ M+ + K + + + +I +G +
Sbjct: 376 PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTF 435
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A K Y +++S G + +V S C + KA KV EM GF YS +
Sbjct: 436 ELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEV 495
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ R+ +A +L +MK G P+V+ Y L+D +A ++Q EM R
Sbjct: 496 IGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGC 555
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
P V+YTT+I AY +A++ + + + G + ++ + K IE+ +
Sbjct: 556 EPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQ 615
Query: 561 LLQDMKSEGTKLDERLYHSAMN 582
+ M+ + D +Y N
Sbjct: 616 IYARMRGDADIPDVDMYFKIKN 637
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 132/331 (39%), Gaps = 16/331 (4%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
AL+ +K+ G Y +L+ F ++ A+ + +E E G+ D + L
Sbjct: 225 ALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMD-----EFTL 279
Query: 338 MYIEEGL--VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ + L V K + + ++ + + +++G + + A+ ++ S C
Sbjct: 280 GFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSC 339
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
IP TY ++ + +++ M +G ++S+V Y K+ A
Sbjct: 340 IPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYK 399
Query: 456 LVAKMKAKGCEPNVWIYNSLM-------DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
L+ KM+ C+P +YN L+ ++ G EK + EM +KV+
Sbjct: 400 LLKKMEKCECKPGYVVYNILIGSICSGGELPGPV-TFELAEKAYNEMLSAGTVLNKVNVV 458
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+ +F+ K +E NG V D + ++G S++E L ++MK
Sbjct: 459 SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT 518
Query: 569 GTKLDERLYHSAMNALRDAGLQMQAQ-WLQQ 598
G D Y ++ AG+ QA WL +
Sbjct: 519 GVVPDVYTYTILIDCFSKAGIIKQAHNWLDE 549
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 7/134 (5%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
YC+++E Y + E + +L L + K S P + +YK+L D+ K+GR AL+ +
Sbjct: 858 YCKVIEGYKR----EFILSLGLLEEVEKNGSAP-TILLYKVLIDNFVKAGRLEVALELHK 912
Query: 284 DM--KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
++ + ++Y SLI SF+ +++ A ELF + G++ D + L++ I
Sbjct: 913 EVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIR 972
Query: 342 EGLVEKTLDVVESM 355
E+ L + +S+
Sbjct: 973 VRRWEEALQLSDSL 986
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/519 (19%), Positives = 217/519 (41%), Gaps = 40/519 (7%)
Query: 111 PEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKI 170
P P T ++I+ L +S D L E+ + +PDA + ++ + +AR
Sbjct: 53 PGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAK 112
Query: 171 A-----------NTLLQVFITDGEIAL----------------------LAFNSAMGGYN 197
A N + + DG +N + G+
Sbjct: 113 ALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFC 172
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
K+H + L+ ++MK +G+ + Y ++ + + + LF R++
Sbjct: 173 KVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLF-----RQMVENGC 227
Query: 258 STHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
++ Y L L ++G EA + +M+E+G+ D Y +L+ ++ +A +
Sbjct: 228 MPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALK 287
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F++ D L+ + G +++ + E M+ + A+++G
Sbjct: 288 VFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLC 347
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A +V E + + C P +TY+S+I+ C+ A++VF M +G + VV
Sbjct: 348 KGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVV 407
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+S++ + T + A+ L+ +M A GC P++ YN+L+D + + +L+ +M
Sbjct: 408 TYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM 467
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + PD ++Y+ +I + + DM +++ + D +V + +
Sbjct: 468 KAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLV 527
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
++ +LL++M + D Y S ++ G ++A+
Sbjct: 528 DDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEAR 566
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 122/514 (23%), Positives = 224/514 (43%), Gaps = 17/514 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + + +HG + + + AY + + + P T L+ L ++ D
Sbjct: 194 PNVVTYSTVIHGFCRQTKV-DTAYKLFRQMVE-NGCMPNLVTYNTLLSGLCRNGLMDEAY 251
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF--ITDGEIA--LLAFNSAM 193
L ++ + + PD + L+A + K +A L+VF ++G+ ++A+++ +
Sbjct: 252 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMA---LKVFEDNSNGDCPPDVVAYSTLI 308
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G K ++EKM+ D + +M+ K GD + A LE + +
Sbjct: 309 AGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCK-GDRLQEAQQVLETMEDR-N 366
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
TP + Y L D L K+G+ +A + F+ M +GI + Y SLI F V A
Sbjct: 367 CTP-NVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 425
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI--SCAIV 371
L +E G L D L+ + G + + MK AK D I SC ++
Sbjct: 426 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK-AKFCNPDVITYSC-LI 483
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
GF K A +++ ++ Q +P VT+++++ YC L AE++ EM
Sbjct: 484 GGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCS 543
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
V Y+S+V + K GR+ +A ++ +M +GC+PNV Y +L+D RA +L
Sbjct: 544 PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRL 603
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF-RMNGGVIDRAIAGIMVGVFS 550
+EM V P+ ++Y ++I + + + K R D +M+
Sbjct: 604 LEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLC 663
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ ++ ++LL+ +K GT +Y + + L
Sbjct: 664 RTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL 697
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 4/234 (1%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++ G K A ++ E++ G +P Y +I+A C+ +KA F M+
Sbjct: 65 VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME--- 121
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+K V+ ++ M+ K R+ +A AKMK KG PN W YN L++ + + +
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
L KEM+ + P+ V+Y+TVI + R + D K + + NG + + ++
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG-LQMQAQWLQQNFEG 602
+ ++E +LL +M+ G + D+ Y + M L G + M + + N G
Sbjct: 242 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 295
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 129/331 (38%), Gaps = 38/331 (11%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ + Y L ++L ++ R E ++ GI + YA +I ++ A EL
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+E E G + D + ++ + K LD SM+ K I+ I +++G K
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTI---MIDGLCKA 139
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A + ++ +G +P + TY +IN +C
Sbjct: 140 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFC--------------------------- 172
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
K ++ A L+ +MK G PNV Y++++ R + KL+++M
Sbjct: 173 --------KVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVE 224
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
P+ V+Y T++S R D + +E R G D+ ++ K +I+
Sbjct: 225 NGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDM 284
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+K+ +D + D Y + + L AG
Sbjct: 285 ALKVFEDNSNGDCPPDVVAYSTLIAGLCKAG 315
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 200/468 (42%), Gaps = 10/468 (2%)
Query: 77 VPDAKKFDSFLHGML--KDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
+PD + L +L +DP L + ++ P+ LI ++ D
Sbjct: 187 LPDLASYSHLLASLLNTRDPPDAALLERLLGDLRE-SRLEPDAPLFSDLISAFARAALPD 245
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSA 192
+ + L + + P ++ + L+++ A + A L F GEI A+N+
Sbjct: 246 AALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNAL 305
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY ++ + V ++M G+ D Y +++AY + G E L E ++
Sbjct: 306 LKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEA--- 362
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D S++++ + G +A R+M+ G+ D Y +I +F +
Sbjct: 363 DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGH 422
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A + F + E+G+ D L+ + + G ++ ++ E M+ + ++N
Sbjct: 423 AMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMIN 482
Query: 373 GFSKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
++ +W V+ + ++ QG +P +TY ++++ Y R Y +A M+ G
Sbjct: 483 LLGEQE-HWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLK 541
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
Y ++V Y + G A+ +V MKA G E ++ + NSL++ G + + + +
Sbjct: 542 PSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSV 601
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+ M + PD ++YTT++ A R +FD Y E +G DR
Sbjct: 602 LQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDR 649
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 193/450 (42%), Gaps = 20/450 (4%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA-----FNSAMGGYNKLH 200
++ LPD + S L+AS + R A LL+ + D + L F+ + + +
Sbjct: 184 HDFLPDLASYSHLLASLLNTRDPPDA-ALLERLLGDLRESRLEPDAPLFSDLISAFARAA 242
Query: 201 MYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE------CKSRKLDS 254
+ + + + ++ G+ S ++ A G + ALFLE K R
Sbjct: 243 LPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPR---- 298
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
T Y L + A + +M + G+ D + Y+ L+ ++ + A
Sbjct: 299 ----TRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
L KE E G+ V +++ + + G +K V+ M+ + ++ +++ F
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A+ + ++ +G P VT+ ++I+A+C+ + +A ++F EM++
Sbjct: 415 GKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGT 474
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
Y+ M+ + G+ ++++MK +G PN+ Y +L+D++GR+ ++ +
Sbjct: 475 TTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEA 534
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+ + P Y +++AY + D + + +G + + ++ F + +
Sbjct: 535 MKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRR 594
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ E +LQ M+ G + D Y + M AL
Sbjct: 595 VVEAFSVLQFMRENGLRPDVITYTTLMKAL 624
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 154/375 (41%), Gaps = 39/375 (10%)
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
D+ + ++ A+ + + AAL L ++ + TP S + L +LG +GR EA
Sbjct: 227 DAPLFSDLISAFARAALPD--AALELLASAQAIGLTPRSNAV-TALISALGTAGRVAEAE 283
Query: 280 KFFRDMKEKG-ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
F + G I Y +L+ + I +K AE++ E + G+ D LV
Sbjct: 284 ALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDA 343
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
Y G E +++ M+ +K S + I+ GF + RG W
Sbjct: 344 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGF-RDRGDW----------------- 385
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
KA V EMQ G Y+ M+ +GK + AM
Sbjct: 386 -----------------QKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFN 428
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
KM+ +G EP+V +N+L+D H + + +L++EM P +Y +I+
Sbjct: 429 KMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQE 488
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
++ +E + G V + +V V+ + + +E + ++ MK++G K +YH
Sbjct: 489 HWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYH 548
Query: 579 SAMNALRDAGLQMQA 593
+ +NA GL A
Sbjct: 549 ALVNAYAQRGLADHA 563
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/503 (23%), Positives = 217/503 (43%), Gaps = 17/503 (3%)
Query: 102 DYYNEAKKLPEFRPEKSTL-----KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCS 156
D+ L EF+ +L + I ++W + V L + V PD T +
Sbjct: 90 DWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYN 149
Query: 157 RLVASCVRARKFKIANTLLQVFITDGE---IALLAFNSAMGGYNKLHMYYSTILVYEKMK 213
+A+C + ++K A LL + E ++ +NSA+ + + + + E+M
Sbjct: 150 SAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMV 209
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
+ G+ + Y + A K E+ L E + P ST Y + D+ K G
Sbjct: 210 AQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGF---PPSTRTYNPVIDACAKGG 266
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
R EA+ M I D Y+S+I + K A +L ++ +G+ P V
Sbjct: 267 RWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGV--SPNVIS 324
Query: 334 --KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYEQL 390
+ + ++ LD++ M L + IS G W A+++ +++
Sbjct: 325 YNSAIDACAKGDRWKEALDLLREMTTVGL-VPTVISYNSATAACAVNGRWVEALELLKEM 383
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+QG P ++Y S ++A + + KA K+ M G D +++++S + G+ +
Sbjct: 384 PAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQW 443
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
A+ L+ +M G PNV YNS ++ GR+ ++ L++EM R ++P+ V+Y ++
Sbjct: 444 ETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSM 503
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
I A + ++++ V+ G D + K Q E ++LL+ M + G
Sbjct: 504 IDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGP 563
Query: 571 KLDERLYHSAMNALRDAGLQMQA 593
K D Y+SA+ A +G +A
Sbjct: 564 KPDIISYNSAVTACAKSGRWREA 586
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/515 (21%), Positives = 227/515 (44%), Gaps = 16/515 (3%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNE--AKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
PD ++S + + +E A D + A+ +P P T I + ++W+
Sbjct: 179 TPDVVTYNSAIAACSNGGRWKE-AMDLLEQMVAQGVP---PNLITYNSAIGACAKGRRWE 234
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAM 193
+ L E+ P T + ++ +C + ++ A LL Q+ D +++++S +
Sbjct: 235 EAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVI 294
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA-ALFLECKSRKL 252
+ + + + E+M++ G+ + Y ++A K GD K A L E + L
Sbjct: 295 AACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAK-GDRWKEALDLLREMTTVGL 353
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
T S + C +GR EAL+ ++M +GI + Y S + + A + +
Sbjct: 354 VPTVISYNSATAAC---AVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEK 410
Query: 313 AEELFKEAEEKGMLRDPEV-CLKLVLMYIEEGLV-EKTLDVVESMKNAKLKISDCISCAI 370
A +L + G DP++ + G E ++++ M A L + +
Sbjct: 411 AVKLLRGMSTVG--SDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSA 468
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+ + + A+ ++ ++ ++G P VTY S+I+A + + A ++ M +G
Sbjct: 469 IEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGV 528
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
V++Y+S + GK + A+ L+ M +G +P++ YNS + ++ R+
Sbjct: 529 APDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALG 588
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L K+M +TP+ VSY I A + ++D+ V+ E + +G + + +
Sbjct: 589 LLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACA 648
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
K + +E V LL D++ +G D + Y + ++A +
Sbjct: 649 KQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQ 683
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/532 (22%), Positives = 220/532 (41%), Gaps = 8/532 (1%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE-FRPEKSTLKLL 123
+ L R+ + PD ++S + K + +E A D + E P+ T
Sbjct: 130 VRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKE-AMDLLTQMVAPTEGITPDVVTYNSA 188
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG- 182
I +W + L E V P+ T + + +C + R+++ A LL+ I G
Sbjct: 189 IAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGF 248
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ +N + K + + + +M + I D Y ++ A + G K A
Sbjct: 249 PPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGR-GRRWKEAM 307
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
LE + R +P + Y D+ K R EAL R+M G++ Y S
Sbjct: 308 DLLE-QMRTQGVSP-NVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATA 365
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ A A EL KE +G+ + + + G EK + ++ M
Sbjct: 366 ACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSD- 424
Query: 363 SDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
D IS + ++ + + + AV++ ++ + G P +TY S I A R A + +A +
Sbjct: 425 PDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGL 484
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F EM +G VV Y+SM+ K + A+ L+ M A+G P+V YNS ++ G+
Sbjct: 485 FREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGK 544
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ +L K M R PD +SY + ++A ++ + + + G +
Sbjct: 545 GEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVS 604
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G + K Q + V++L++M++ G + Y +A++A G +A
Sbjct: 605 YGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEA 656
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 181/444 (40%), Gaps = 8/444 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P T +I + +W + L ++ D + S ++A+C R R++K A
Sbjct: 248 FPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAM 307
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
LL+ T G ++++NSA+ K + + + +M + G+V Y A
Sbjct: 308 DLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAAC 367
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
G + L E ++ + S Y D+ K G+ +A+K R M G
Sbjct: 368 AVNGRWVEALELLKEMPAQGIAPNTIS---YNSALDACAKGGQWEKAVKLLRGMSTVG-- 422
Query: 292 EDPSI--YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
DP I + S I + + + A EL +E G+ + + ++ +
Sbjct: 423 SDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAM 482
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+ M L + ++++ +K + AV++ + ++G P ++Y S I A
Sbjct: 483 GLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEAC 542
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ + A ++ M +G +++Y+S V K+GR R+A+ L+ M G PN
Sbjct: 543 GKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNT 602
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
Y + + G+ + ++ KEM+ TP+ ++Y+ I A + + V +
Sbjct: 603 VSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTD 662
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLS 553
R G D ++ F + S
Sbjct: 663 LRRQGLTPDAQTYLTVISAFQRCS 686
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/504 (22%), Positives = 225/504 (44%), Gaps = 49/504 (9%)
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
E K F P+ T +I + + D + + + P+ T + L+A+ RA
Sbjct: 136 EEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVTYTALIAAFARA 192
Query: 166 RKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
+K + A LL+ G L+ +N + KL M + V +KM G + +
Sbjct: 193 KKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTF 252
Query: 225 CQIMEAYYKIG---DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
+++ + K G D+ K+ + + R + Y L D L KS + EA +
Sbjct: 253 NSLVDGFCKRGNVDDARKLLGIMVAKGMRP------NVVTYSALIDGLCKSQKFLEAKEV 306
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+MK +G+ D Y++LI +++ AE++ + G D V ++ + +
Sbjct: 307 LEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 366
Query: 342 EGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQG-CIPGQ 399
G + + ++ M+ + K D ++ +++G K A + EQ+ G +P
Sbjct: 367 SGKLLEAQKTLQEMRKQR-KSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDV 425
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
VTY+++IN C+ + +A+K+ M + G + VV Y++++ K GR+ +A +L+
Sbjct: 426 VTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 485
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
MK GC PNV Y +L+ +A+ + + E++ +EM P+ V+Y T+++
Sbjct: 486 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG------ 539
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+CV ++ + ++LV+ ++D ++E + D Y +
Sbjct: 540 --LCVS------------------------GRIKEAQQLVQRMKDGRAECSP-DAATYRT 572
Query: 580 AMNALRDAGLQMQAQWLQQNFEGT 603
+NAL + L +A+ L + + T
Sbjct: 573 IVNALMSSDLVQEAEQLLEQMKST 596
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 156/325 (48%), Gaps = 3/325 (0%)
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
EA FR D Y +I F + ++ A EL +E + G D ++
Sbjct: 95 EAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPII 154
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
G ++ +D + SM ++ A++ F++ + A+K+ E++ +GC
Sbjct: 155 TAMANAGDLDGAMDHLRSMGCDPNVVT---YTALIAAFARAKKLEEAMKLLEEMRERGCP 211
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P VTY +++A C++++ A+ V +M + GF V+ ++S+V + K G + DA L
Sbjct: 212 PNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKL 271
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ M AKG PNV Y++L+D +++ + +++ +EM+ R VTPD +Y+ +I +
Sbjct: 272 LGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCK 331
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
A + + + +G D + ++ F K ++ E K LQ+M+ + D
Sbjct: 332 ADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVT 391
Query: 577 YHSAMNALRDAGLQMQAQWLQQNFE 601
Y++ ++ L G +AQ + + +
Sbjct: 392 YNTVIDGLCKLGKIAEAQVILEQMQ 416
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 195/424 (45%), Gaps = 8/424 (1%)
Query: 163 VRARKFKIANTLLQV-FITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
VR +K + A L + + E + ++N + G+ ++ + + E+MKSAG D+
Sbjct: 88 VRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDA 147
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
+ I+ A GD + R + P + Y L + ++ + EA+K
Sbjct: 148 FTHTPIITAMANAGDLDGAMDHL-----RSMGCDP-NVVTYTALIAAFARAKKLEEAMKL 201
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+M+E+G + Y L+ + ++ V A+++ K+ E G + LV + +
Sbjct: 202 LEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCK 261
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G V+ ++ M ++ + A+++G K + + A +V E++ ++G P T
Sbjct: 262 RGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFT 321
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y+++I+ C+ +AE++ M G VV YSS++ + K+G++ +A + +M+
Sbjct: 322 YSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR 381
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM-ERRKVTPDKVSYTTVISAYNRAREF 520
+ P+V YN+++D + + + + + ++M E V PD V+Y+TVI+ ++
Sbjct: 382 KQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDML 441
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
K + G D ++ K ++EE LLQ MK G + Y +
Sbjct: 442 VEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTL 501
Query: 581 MNAL 584
++ L
Sbjct: 502 ISGL 505
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 161/428 (37%), Gaps = 89/428 (20%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKL------PEFRPEKSTLKLLIRYLVQSK 131
P+ F+S + G K ++A+KL RP T LI L +S+
Sbjct: 247 PNVMTFNSLVDGFCK--------RGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 298
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNS 191
K+ + E+ K V PDA T S L+ +A K + A +L+
Sbjct: 299 KFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLR--------------- 343
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+M +G D Y I+ A+ K G + E RK
Sbjct: 344 -------------------RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQE--MRK 382
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG-ILEDPSIYASLICSFASITEV 310
+P Y + D L K G+ EA M+E G +L D Y+++I +
Sbjct: 383 QRKSP-DVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDML 441
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A++L + G D ++ + G +E+ +++ MK A + +
Sbjct: 442 VEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTL 501
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++G K R A +V E++ + GC P VTY +++N C
Sbjct: 502 ISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLC-------------------- 541
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK--AKGCEPNVWIYNSLMDMHGRAKNLRQV 488
+GRI++A LV +MK C P+ Y ++++ + +++
Sbjct: 542 ---------------VSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 586
Query: 489 EKLWKEME 496
E+L ++M+
Sbjct: 587 EQLLEQMK 594
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 175/371 (47%), Gaps = 3/371 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V +M + GIV D+ Y +++ + K+G+ + LF E + +++ P ++C
Sbjct: 67 VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRI--VPDFIAYTAVIC- 123
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L + G+ EA K F M +G+ D Y +LI + E++ A L + + G+
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ L + G V+ +++ M L+++ C ++VNG K AVK+
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
E++ G P +T+ ++++AYC+ KA ++ EM +G V+ ++ ++ + +
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G + D L+A M KG PN YNSLM + N+R +++K M R V PD +Y
Sbjct: 304 GMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTY 363
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+I + +AR + E G + + ++ F K +I E +L ++M+
Sbjct: 364 NILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRR 423
Query: 568 EGTKLDERLYH 578
EG D +Y+
Sbjct: 424 EGMAADAEIYN 434
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 173/376 (46%), Gaps = 50/376 (13%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
MK G D Y ++ Y G+ +KV L E + + L ++ + +L L K
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILL---LCK 57
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
SG+ +A + R+M +GI+ D +Y +LI F + ++ A +LF E E++ ++ D
Sbjct: 58 SGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPD--- 114
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
+ Y A++ G + A KV+ ++
Sbjct: 115 ----FIAYT----------------------------AVICGLCRCGKMMEADKVFNKMF 142
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
S+G P +VTY ++I+ YC+ KA + +M Q G VV Y+++ K G++
Sbjct: 143 SRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVD 202
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
A L+ +M KG + N+ YNSL++ ++ N+RQ KL +EME + PD +++TT++
Sbjct: 203 TANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLM 262
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIA------GIMVGVFSKLSQIEELVKLLQDM 565
AY + E VK + R ++DR + +++ F +E+ +LL M
Sbjct: 263 DAYCKTGEM---VKAHELLR---EMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWM 316
Query: 566 KSEGTKLDERLYHSAM 581
+G + Y+S M
Sbjct: 317 LEKGIMPNTTTYNSLM 332
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/448 (19%), Positives = 190/448 (42%), Gaps = 4/448 (0%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ + +I + ++ L ++ ++ + P+ +T + ++ ++ K A +
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ I G + + + + + G+ KL + ++++M+ IV D Y ++ +
Sbjct: 68 LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G + +F + SR ++ + Y L D KSG +A M + G+ +
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVT---YTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y +L + +V A EL E KG+ + LV + G + + + ++E
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M+ A + +++ + K A ++ +++ +G P +T+ ++N +C
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSG 304
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ E++ M +KG Y+S++ Y +R + M A+G P+ YN
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYN 364
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
L+ H +A+N+++ L KEM + SY ++I + + ++ + + E R
Sbjct: 365 ILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRRE 424
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKL 561
G D I + V + +E ++L
Sbjct: 425 GMAADAEIYNLFVDISYGEGNMETALEL 452
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 127/258 (49%)
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
Y G ++K L +++ M+ LK + +I+ K A +V ++I+QG +P
Sbjct: 20 YCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPD 79
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
V Y ++I+ +C++ A K+F EM+++ +AY++++ + G++ +A +
Sbjct: 80 TVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFN 139
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
KM ++G EP+ Y +L+D + ++ + + L +M + +TP+ V+YT + +
Sbjct: 140 KMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLG 199
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ D + +E G ++ +V K I + VKL+++M+ G D +
Sbjct: 200 QVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFT 259
Query: 579 SAMNALRDAGLQMQAQWL 596
+ M+A G ++A L
Sbjct: 260 TLMDAYCKTGEMVKAHEL 277
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 65/134 (48%)
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
MK +G P+V Y+++++ + L++V KL +EM+ + + P+ +Y ++I ++ +
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
D + E G V D + ++ F KL I+ KL +M+ + D Y +
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 580 AMNALRDAGLQMQA 593
+ L G M+A
Sbjct: 121 VICGLCRCGKMMEA 134
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/518 (21%), Positives = 228/518 (44%), Gaps = 7/518 (1%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR-YLVQSKKWDSIV 137
D + + + LH + + + E A + + E ++ P T +++ Y + W IV
Sbjct: 172 DVRAYTTVLHALSRAGR-YERAVELFAELRR-QGVAPTLVTYNVVLDVYGRMGRSWPRIV 229
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+L ++ + V PD T S ++A+C R A + G ++ +N+ + +
Sbjct: 230 ALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVF 289
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K Y + V ++M+ G D+ Y ++ Y + G E+ A S+ L
Sbjct: 290 GKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNA 349
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
F+ Y + + G G+ EAL F MK+ G + + + Y ++ + + E+
Sbjct: 350 FT---YNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEM 406
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E G + ++ + + G+ + V+E MK+ +++S ++ + +
Sbjct: 407 LGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGR 466
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A K+Y ++ S G P TY +++N R +S A+ + +M+ KGF +
Sbjct: 467 CGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQS 526
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
YS ++ Y K G I + ++ P+ I +L+ + + + L +EK ++E++
Sbjct: 527 YSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVK 586
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
R PD V + +++S Y + + + ++ + +G D ++ +++K S+
Sbjct: 587 ARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESW 646
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
E K+L +KS K D Y++ +N GL +AQ
Sbjct: 647 EAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQ 684
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 159/379 (41%), Gaps = 9/379 (2%)
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECK---SRKLDSTPFSTHMYKILCDSLGKSGRAF 276
D+ ++ A + G + V AL E +LD ++T ++ +L ++GR
Sbjct: 136 DASALEMVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTVLH-----ALSRAGRYE 190
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEV-KLAEELFKEAEEKGMLRDPEVCLKL 335
A++ F +++ +G+ Y ++ + + L E G+ D +
Sbjct: 191 RAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTV 250
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ +GLV++ + E +K A++ F K Y A++V +++ GC
Sbjct: 251 IAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGC 310
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P VTY + Y R Y +A K M KG Y++++ YG G++ +A+
Sbjct: 311 QPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALA 370
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L +MK GC PNV YN ++ M G+ + ++ EM R TP++V++ T+++
Sbjct: 371 LFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCG 430
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+ D + + G + R ++ + + K+ +M S G
Sbjct: 431 KRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLT 490
Query: 576 LYHSAMNALRDAGLQMQAQ 594
Y++ +N L G AQ
Sbjct: 491 TYNALLNVLSRQGDWSTAQ 509
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/391 (18%), Positives = 160/391 (40%), Gaps = 4/391 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P +T ++ L + ++ ++ + + P+ T + ++A C + +
Sbjct: 382 PNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRV 441
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ + G E++ +N+ + Y + + +Y +M SAG Y ++ +
Sbjct: 442 LEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSR 501
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
GD ++ + +++ + Y +L K G +++ +
Sbjct: 502 QGDWSTAQSIVSKMRTKGFKP---NDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPS 558
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
I +L+ + + E+ F+E + +G D + ++ MY + G+ K ++ +
Sbjct: 559 WVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFD 618
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
S+K + L ++++ ++K W A K+ QL S P V+Y ++IN +C+
Sbjct: 619 SIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQG 678
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
L +A+++ EM G CVV Y ++V Y +A ++ M +P Y
Sbjct: 679 LIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYR 738
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
++D + +AK + E+ DK
Sbjct: 739 RVVDSYCKAKRFEEARSFLSEVSETDPNFDK 769
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 177/403 (43%), Gaps = 12/403 (2%)
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFN 190
K D ++L + K +P+ +T + ++ + +F + +L G + +N
Sbjct: 364 KVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWN 423
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ + K M V E MKS G+ L Y ++ AY + G ++ E S
Sbjct: 424 TMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSA 483
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
P T Y L + L + G A M+ KG + Y+ L+ +A +
Sbjct: 484 GF--APCLT-TYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNI 540
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIE---EGLVEKTLDVVESMK-NAKLKISDCI 366
+ + KE + + LV+ + G +EK V++ N L I +
Sbjct: 541 AGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFN-- 598
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
++++ ++K Y ++++ + G P +TY S+++ Y + + +AEK+ +++
Sbjct: 599 --SMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLK 656
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
VV+Y++++ + K G I++A ++++M A G P V Y++L+ + +
Sbjct: 657 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFS 716
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
+ ++ M + + P +++Y V+ +Y +A+ F+ F +E
Sbjct: 717 EAREVINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSE 759
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/477 (23%), Positives = 210/477 (44%), Gaps = 20/477 (4%)
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
+ L +++ L ++K + +S+ K P ++T + ++ ++ + + L
Sbjct: 160 ADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNE 219
Query: 178 FITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG 235
+G+ + +++ + + KL S I ++++MK G+ + Y I+ Y+K+G
Sbjct: 220 MCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLG 279
Query: 236 DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
EK L E K + + + Y L +GK+G+ EA F +M ++G D
Sbjct: 280 RVEKALGLVQEMKEK---GCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVV 336
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVE 353
+ +LI + A +LF+E E C V+ Y + + L E E
Sbjct: 337 LINNLINLLGKAGRLADAIKLFEEMESLQ-------CTPNVVTYNTVIKALFESKARASE 389
Query: 354 S------MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+ MK + S +++GF K A+ + E++ +G P Y S+IN
Sbjct: 390 AFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLIN 449
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
A + Y A ++F E+++ Y+ M+ GK GR+ +A+ L +MK GC P
Sbjct: 450 ALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNP 509
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
+V+ YN+LM R + L + ME TPD S+ +++ + R ++ +
Sbjct: 510 DVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMF 569
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + D ++G S+ EE KL+++M S+G + D Y S + A+
Sbjct: 570 TRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAV 626
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 179/394 (45%), Gaps = 5/394 (1%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
++M + V+ +I++ K K ++F + K RK T ++ Y + L
Sbjct: 148 QEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPT---SNTYNSMILML 204
Query: 270 GKSGRAFEALKFFRDMKEKG-ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
+ G + + + +M +G L D Y++LI +F + A LF E +E G+
Sbjct: 205 MQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPT 264
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
++ ++ +Y + G VEK L +V+ MK ++ ++ G K A ++
Sbjct: 265 AKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFM 324
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKT 447
++ +GC P V ++IN + + A K+F EM+ VV Y++++ A++
Sbjct: 325 NMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESK 384
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
R +A KMK G P+ + Y+ L+D + + + L +EM+ + P +Y
Sbjct: 385 ARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAY 444
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
++I+A +A+ ++ + + E R N G + +M+ K ++ E V L +MK
Sbjct: 445 CSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKK 504
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
G D Y++ M+ + G+ +A L + E
Sbjct: 505 LGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTME 538
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 167/338 (49%), Gaps = 9/338 (2%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
DST T+M I C L ++G E K ++M + P+ + ++ V
Sbjct: 123 DST---TYMALIHC--LDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNK 177
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIV 371
A +F + + + ++LM ++EG EK ++ M N + D ++ A++
Sbjct: 178 ALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALI 237
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
F K +A+ +++++ G P Y +I+ Y ++ KA + EM++KG
Sbjct: 238 AAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCA 297
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
V Y+ ++ GK G++ +A + M +GC+P+V + N+L+++ G+A L KL
Sbjct: 298 LTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKL 357
Query: 492 WKEMERRKVTPDKVSYTTVISAY--NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
++EME + TP+ V+Y TVI A ++AR + + +Y + + NG V I++ F
Sbjct: 358 FEEMESLQCTPNVVTYNTVIKALFESKARASEAFL-WYEKMKENGVVPSSFTYSILIDGF 416
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
K +++E+ + LL++M +G Y S +NAL A
Sbjct: 417 CKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKA 454
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 186/444 (41%), Gaps = 6/444 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + ++S + ML E ++ YNE + P+ T LI + + DS +
Sbjct: 192 PTSNTYNSMIL-MLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAI 250
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
SL ++ K + P A + ++ + + + A L+Q G + + + + G
Sbjct: 251 SLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGV 310
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K ++ M G D ++ K G LF E +S L TP
Sbjct: 311 GKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMES--LQCTP 368
Query: 257 FSTHMYKILCDSLGKS-GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y + +L +S RA EA ++ MKE G++ Y+ LI F V+ A
Sbjct: 369 -NVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALL 427
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L +E +EKG P L+ + E ++ + ++ S + ++
Sbjct: 428 LLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLG 487
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K AV ++ ++ GC P Y ++++ R+ + +A + M++ G +
Sbjct: 488 KCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLN 547
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+++ ++ + +TG + A+ + +MK +P+V YN+++ RA + KL KEM
Sbjct: 548 SHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEM 607
Query: 496 ERRKVTPDKVSYTTVISAYNRARE 519
+ D ++Y++++ A + E
Sbjct: 608 NSKGFEYDLITYSSILEAVGKIDE 631
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 162/328 (49%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L D+ G+ EA + + E + + YA LI ++ ++ AE +F E +
Sbjct: 165 YNLLIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYALLIKAYCLSGLLEKAEAVFVEMK 224
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
G+ V + ++ G K ++ MK K S ++N + K +
Sbjct: 225 NYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKSF 284
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+KV+ +++S C P TY +++NA+ R L KAE+VF +MQ+ G + V +Y++++
Sbjct: 285 MALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALM 344
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y + G A + + M+ GCEP+ YN L+D +GRA L E ++++M+R +T
Sbjct: 345 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGIT 404
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P S+ ++SA+++ C N+ +G +D + M+ ++ +L Q ++ ++
Sbjct: 405 PTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEV 464
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGL 589
L M++ + D Y+ +N AG
Sbjct: 465 LTVMENGSCEADISTYNILINRYGQAGF 492
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 159/341 (46%), Gaps = 13/341 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ +N + + + +Y Y ++ A + + Y +++AY G EK A+F+
Sbjct: 162 VICYNLLIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYALLIKAYCLSGLLEKAEAVFV 221
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E K+ L P S +Y + L K G +A + F MK G Y LI +
Sbjct: 222 EMKNYGL---PSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYG 278
Query: 306 SITEVKLAEELFKEAEEKGMLRD---PEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ +A ++F E ML P +C LV + EGL EK +V E M+ A L
Sbjct: 279 KDGKSFMALKVFNE-----MLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGL 333
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ A++ +S+ + A +++ + GC P + +Y +++AY R + AE
Sbjct: 334 EPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEA 393
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
VF +M++ G + ++ +++ + KTG + ++ +M G + + ++ NS+++++G
Sbjct: 394 VFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYG 453
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
R ++E++ ME D +Y +I+ Y +A D
Sbjct: 454 RLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 494
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 128/291 (43%)
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+D Y LI +F K AE + + E + + + L+ Y GL+EK V
Sbjct: 160 QDVICYNLLIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYALLIKAYCLSGLLEKAEAV 219
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
MKN L S + + +NG K A +++ ++ GC P TY +IN Y +
Sbjct: 220 FVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGK 279
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
A KVF EM + Y+++V + + G A + +M+ G EP+V+
Sbjct: 280 DGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYS 339
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
YN+LM+ + RA +++ M+ PD+ SY ++ AY RA + + + +
Sbjct: 340 YNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMK 399
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
G +++ FSK + + +L M G KLD + +S +N
Sbjct: 400 RVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLN 450
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 167/386 (43%), Gaps = 41/386 (10%)
Query: 127 LVQSKKWDSIVSL----------SEDFKIYNVLPDAHTCSRLVASCVRARKF---KIANT 173
L K+WDSI+S+ +D YN+L DA +KF + +T
Sbjct: 136 LRMRKQWDSIISICRWILLRSSFKQDVICYNLLIDAF-----------GQKFLYKEAEST 184
Query: 174 LLQVF-----ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
LQ+ + ALL + G + V+ +MK+ G+ + Y +
Sbjct: 185 YLQLLEARCIPNEDTYALLIKAYCLSG-----LLEKAEAVFVEMKNYGLPSSAVVYNSYI 239
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
K G+ K +FL K D ST Y +L + GK G++F ALK F +M
Sbjct: 240 NGLMKGGNPNKAEEIFLRMKR---DGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSH 296
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVE 346
+ Y +L+ +FA + AEE+F++ +E G+ +P+V LM Y G
Sbjct: 297 KCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGL--EPDVYSYNALMEAYSRAGFPY 354
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
++ M++ + +V+ + + A V+E + G P ++ ++
Sbjct: 355 GAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLL 414
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
+A+ + SK E + +M + G +SM+ +YG+ G+ ++ M+ CE
Sbjct: 415 SAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCE 474
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLW 492
++ YN L++ +G+A + ++E L+
Sbjct: 475 ADISTYNILINRYGQAGFIDKMEGLF 500
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 220/487 (45%), Gaps = 6/487 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P S+ LL+ L+ + + + PD ++ V +CV A A +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180
Query: 175 LQ-VFITDGEIALLAF--NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L+ + ++G AF N + G + + V+++M G+ + Y +++ +
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K GD E A L + + P + Y +L L ++GR E +M +L
Sbjct: 241 VKGGDLE--AGFRLRDQMLQDGRKP-NVVTYNVLLSGLCRAGRMDETRALMDEMTSYSML 297
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
D Y+ L + + LF E+ +KG++ C L+ ++G V K V
Sbjct: 298 PDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQV 357
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+E + + L + I ++NG+ + R A ++EQ+ S+ P +TY ++IN C+
Sbjct: 358 LEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCK 417
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ + ++AE + +EM++ G D V +++++ YG+ G++ +++ M+ KG + NV
Sbjct: 418 MEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVIS 477
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+ S++ + + + + +M + V P+ Y ++I AY + + + +
Sbjct: 478 FGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMK 537
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
+G +++ K SQI+E +L+ ++ ++G + D Y++ ++A + G
Sbjct: 538 SSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTD 597
Query: 592 QAQWLQQ 598
+A L Q
Sbjct: 598 RALELLQ 604
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 177/397 (44%), Gaps = 10/397 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T +L L ++ +++SL + V+ A+TCS L+ + K A +
Sbjct: 298 PDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQV 357
Query: 175 LQVFITDGEIALLA-FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L++ + G + A +N+ + GY ++ ++E+MKS I D Y ++ K
Sbjct: 358 LEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCK 417
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ + L +E + +D S + L D+ G++G+ + DM++KGI +
Sbjct: 418 MEMITEAEDLVMEMEKSGVDP---SVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSN 474
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ S++ +F ++ A + + K ++ + +V ++ YIE G E+ +VE
Sbjct: 475 VISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVE 534
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
MK++ + S ++ G K A ++ L +QG P V+Y +II+A C
Sbjct: 535 KMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKG 594
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+A ++ EM + + Y +++ G GR+ D L M K EP+ IY
Sbjct: 595 DTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYG 654
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
+ R +N +V L KEM + + D T +
Sbjct: 655 T------RCENESKVASLKKEMSEKGIAFDDTERTNL 685
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 190/394 (48%), Gaps = 9/394 (2%)
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
+AG D+ + + ++A GD ++ A+ L R + P Y ++ L +SG
Sbjct: 151 AAGARPDTFAWNKAVQACVAAGDLDEALAM-LRRMGRSEGAPPPDAFSYNVVIAGLWRSG 209
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
+ +ALK F +M ++G+ + Y ++I +++ L + + G R P V
Sbjct: 210 KGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDG--RKPNVVT 267
Query: 334 KLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIV-NGFSKRRGYWAAVKVYEQL 390
VL+ G +++T +++ M + + + D + +I+ +G ++ + ++ +
Sbjct: 268 YNVLLSGLCRAGRMDETRALMDEMTSYSM-LPDGFTYSILFDGLTRTGDSRTMLSLFGES 326
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+ +G I G T + ++N C+ +KAE+V + G Y++++ Y + +
Sbjct: 327 LKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDL 386
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
+ A + +MK++ P+ YN+L++ + + + + E L EME+ V P ++ T+
Sbjct: 387 QGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTL 446
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEG 569
I AY RA + + C ++ + + G+ I+ G +V F K +I E V +L DM +
Sbjct: 447 IDAYGRAGQLEKCFTVLSDMQ-DKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKD 505
Query: 570 TKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
+ ++Y+S ++A ++G QA L + + +
Sbjct: 506 VVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSS 539
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 180/443 (40%), Gaps = 36/443 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ + ++I L +S K + + ++ V P+ T + ++ V+ + L
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRL 252
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ DG + ++ +N + G + T + ++M S ++ D Y + + +
Sbjct: 253 RDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTR 312
Query: 234 IGDSEKVAALFLE--------------------CKSRKLDSTP------------FSTHM 261
GDS + +LF E CK K+ +T +
Sbjct: 313 TGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAI 372
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L + + A F MK + I D Y +LI + + AE+L E E
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGY 380
+ G+ E L+ Y G +EK V+ M++ +K S+ IS ++V F K
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIK-SNVISFGSVVKAFCKNGKI 491
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
AV + + +I + +P Y SII+AY +A + +M+ G + Y+ +
Sbjct: 492 PEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLL 551
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ K +I +A L+ + +G P+V YN+++ + + +L +EM + +
Sbjct: 552 LKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDI 611
Query: 501 TPDKVSYTTVISAYNRA-REFDM 522
P +Y ++SA A R DM
Sbjct: 612 RPTLRTYHPLLSALGSAGRVHDM 634
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 123/559 (22%), Positives = 238/559 (42%), Gaps = 72/559 (12%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A+ +++E K + T +I L ++ + + V L E +P A+ +
Sbjct: 287 DMAWKFFHEMKA-NGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNT 345
Query: 158 LVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMK--- 213
++ A KF+ A +LL+ G I +++++N + + + +E+MK
Sbjct: 346 MIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA 405
Query: 214 -----SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----------CKSRKLDST-- 255
+ I++D C +E + D+ K A LF CK+++LD
Sbjct: 406 IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACS 465
Query: 256 -----------PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--- 301
P + Y L + LG+ GR EA K + M + + + +Y SLI
Sbjct: 466 IFEGLDHKTCRPDAV-TYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNF 524
Query: 302 ---------------------------------CSFASITEVKLAEELFKEAEEKGMLRD 328
C F + E++ LF+E + G + D
Sbjct: 525 FKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKA-GEIEKGRALFQEIKNLGFIPD 583
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ ++ G + ++ +MK + +++GF K A ++ E
Sbjct: 584 ARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLE 643
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ ++G P VTY S+I+ +I +A +F E + KG + VV YSS++ +GK G
Sbjct: 644 EMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVG 703
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
RI +A ++ ++ KG PNV+ +N L+D +A+ + + ++ M+ K TP+ ++Y+
Sbjct: 704 RIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYS 763
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I + R+F+ F+ E + G + M+ +K I E L + K +
Sbjct: 764 ILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEK 823
Query: 569 GTKLDERLYHSAMNALRDA 587
G D +Y++ + L +A
Sbjct: 824 GGVADSAIYNAIIEGLSNA 842
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 116/542 (21%), Positives = 221/542 (40%), Gaps = 52/542 (9%)
Query: 89 GMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNV 148
G+L+ + A +Y+ A++L + + L+ + +++K++ + + E+ I
Sbjct: 102 GVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGF 161
Query: 149 LPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYST--- 205
P +TC +V S +++RK + A T +Q + L F A Y L ST
Sbjct: 162 GPSNNTCIEIVLSFIKSRKLREAFTFIQT------MRKLKFRPAFSAYTNLIGALSTSRD 215
Query: 206 ----ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
+ ++++M+ G ++ + ++ + + G + +L E KS L+ +
Sbjct: 216 SDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEP---DVVL 272
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y + D GK+G+ A KFF +MK G++ D Y S+I + A ELF+ +
Sbjct: 273 YNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMD 332
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ + +++ Y G E ++E + S I++ ++
Sbjct: 333 QNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVD 392
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+K +E++ + IP TY +I+ C+ A V M+ G V+ + MV
Sbjct: 393 EALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMV 451
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
K R+ DA + + K C P+ Y SL++ GR + + KL+++M
Sbjct: 452 DRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQI 511
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ V YT++I + + + K YNE G D + + K +IE+ L
Sbjct: 512 PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRAL 571
Query: 562 LQD-----------------------------------MKSEGTKLDERLYHSAMNALRD 586
Q+ MK +G LD R Y++ ++
Sbjct: 572 FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCK 631
Query: 587 AG 588
+G
Sbjct: 632 SG 633
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 221/453 (48%), Gaps = 14/453 (3%)
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARK-FKIANTLLQVFITDG-EIALLAFNSA 192
SIV+L+ K Y +P + + ++ + +R ++ KIA + + + G + +N
Sbjct: 153 SIVNLA---KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNIL 209
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY---YKIGDSEKVAALFLECKS 249
+ G+ + + +M+ G + + Y I++AY KIG++ K+ L
Sbjct: 210 IRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLM---AL 266
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
+ L+ S Y ++ + L + G+ E + +M ++ + D + +LI + ++
Sbjct: 267 KGLNPNLIS---YNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGN 323
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
A L E + G+ + L+ + G + + ++ ++ M++ L +
Sbjct: 324 FHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++GFS++ A ++ ++++ G P +TY ++IN +C + A + EM ++G
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
F VV+YS++++ + + + A L +M AKG P+V Y+SL+ + + L +V
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
L++EM + PD+V+YT++I+AY + D ++ ++E G D +++ F
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+K S+ +E +LL + E + +E Y++ ++
Sbjct: 564 NKQSRTKEAKRLLLKLLYEESVPNEITYNTLID 596
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 182/396 (45%), Gaps = 13/396 (3%)
Query: 213 KSAGIVLDSGCYCQIMEAYYKIGDSEKVA-ALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
KS G + Y I++A + S K+A +F E + ++ Y IL
Sbjct: 159 KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYT---YNILIRGFCT 215
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+G L FF +M+ G L + Y ++I ++ + ++ A +L + KG+ +P +
Sbjct: 216 AGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGL--NPNL 273
Query: 332 CLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
V++ EG +++T +++E M + ++NG+ + A+ ++ +
Sbjct: 274 ISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAE 333
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
++ G P VTY ++IN+ C+ ++A + +M+ +G Y++++ + + G
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
++ A ++ +M G P + YN+L++ H + L +EM R PD VSY+T
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+IS + R +E + + E G D A ++ K ++ E+ L Q+M S G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 570 TKLDERLYHSAMNAL-----RDAGLQMQAQWLQQNF 600
DE Y S +NA D L++ + +Q+ F
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGF 549
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/514 (21%), Positives = 223/514 (43%), Gaps = 27/514 (5%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P +++ L +++ Q+ ++A + E + P T +LIR + +
Sbjct: 164 MPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVE-SGVSPNVYTYNILIRGFCTAGNLEMG 222
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+ + + LP+ T + ++ + + RK A LL++ G L+++N + G
Sbjct: 223 LFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ T + E+M V D + ++ Y +G+ + AL L + K +
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQ--ALVLHAEMVKNGLS 340
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P + Y L +S+ K+G A++F M+++G+ + Y +LI F+ +K A +
Sbjct: 341 P-NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQ 399
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGF 374
+ KE E G L+ + G +E +++ M I D +S I++GF
Sbjct: 400 IMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGF-IPDVVSYSTIISGF 458
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+ + A ++ +++++G P TY+S+I C+ + +F EM G
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDE 518
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V Y+S++ Y G + A+ L +M KG P++ YN L++ + ++ ++L +
Sbjct: 519 VTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLK 578
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+ + P++++Y T+I N EF + F M G
Sbjct: 579 LLYEESVPNEITYNTLIDNCNNL-EFKSALALMKGFCMKG-------------------L 618
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ E ++L+ M +G KL+E +Y+ ++ G
Sbjct: 619 MNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVG 652
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/509 (18%), Positives = 195/509 (38%), Gaps = 58/509 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ ++ ++G+ ++ Q +E + +K+ + P++ T LI + +
Sbjct: 271 PNLISYNVVINGLCREGQMKETSEILEEMSKR--RYVPDRVTFNTLINGYCNVGNFHQAL 328
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L + + P+ T + L+ S +A A L G + + + G+
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGF 388
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
++ + ++M G Y ++ + +G E + L E R
Sbjct: 389 SQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDV 448
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
S Y + ++ +A + +M KGI D + Y+SLI + +L
Sbjct: 449 VS---YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDL 505
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F+E G+ D L+ Y EG ++K L + + M ++NGF+K
Sbjct: 506 FQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNK 565
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIIN---------------AYCRIALYSKAEKV 421
+ A ++ +L+ + +P ++TY ++I+ +C L ++A++V
Sbjct: 566 QSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRV 625
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
M QKG+ Y+ ++ + K G I A YN
Sbjct: 626 LESMLQKGYKLNEEVYNVIIHGHSKVGNIEKA------------------YN-------- 659
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVI-SAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
L+KEM P V+ + S Y+ +E ++ + + + + + A
Sbjct: 660 ---------LYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELN-QLLDYTLKSCRITEAA 709
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+A +++G+ SK ++ + +L+DM G
Sbjct: 710 LAKVLIGINSKEGNMDAVFNVLKDMALSG 738
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 186/400 (46%), Gaps = 6/400 (1%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ +++ + + KL Y S I ++++MK G+ + Y ++ Y+K+ EK + E
Sbjct: 235 VTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKE 294
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
K + T F+ Y LGK+GR +A + F DM + G D + SLI
Sbjct: 295 MKDKGCTLTVFT---YTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGK 351
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE--GLVEKTLDVVESMKNAKLKISD 364
+ +++ +LF++ E + V V+ + E + E MK + S
Sbjct: 352 VGRLEVTLKLFRKMES-WQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSS 410
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++GF K A+ + E++ +G P Y S+IN+ ++ Y A ++F+E
Sbjct: 411 FTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLE 470
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+++ Y+ M+ +GK GR+ +A+ L +M+ G +P+V+ YN+LM RA
Sbjct: 471 LKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGM 530
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+ + + L + M+ +PD S+ +++ R D ++ + + + + D
Sbjct: 531 IDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNT 590
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++G S EE KL+++M +G + + Y S + A+
Sbjct: 591 VLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEAV 630
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 176/445 (39%), Gaps = 39/445 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P A ++S + MLK E ++ YNE P+ T LI + +DS +
Sbjct: 196 PAATTYNSMIL-MLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAI 254
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA----------NTLLQVF--------- 178
L ++ K + P A + L+ + K + A L VF
Sbjct: 255 RLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGL 314
Query: 179 ----------------ITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
I DG + ++ NS + K+ T+ ++ KM+S +
Sbjct: 315 GKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNV 374
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y +++A ++ AA + E K + P S+ Y IL D K+ R +AL
Sbjct: 375 VTYNTVIKALFECKAPASEAASWFE-KMKGCGIAP-SSFTYSILIDGFCKTNRIEKALLL 432
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+M EKG P+ Y SLI S + + A ELF E +E V ++ + +
Sbjct: 433 LEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGK 492
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G + + +D+ M+ K A+++G + A + + GC P +
Sbjct: 493 CGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNS 552
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ I+N R + +A ++F +M+ V+Y++++ G +A L+ +M
Sbjct: 553 HNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMN 612
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLR 486
KG E N Y S+++ G+ R
Sbjct: 613 LKGFEYNNITYTSILEAVGKVDEDR 637
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/490 (22%), Positives = 216/490 (44%), Gaps = 20/490 (4%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ T+ L++ + V L ++ +L DA T L+ +ARK +A
Sbjct: 1012 FEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAI 1071
Query: 173 TLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L + + + + + + K M + ++ +M AGI+ D Y +M+
Sbjct: 1072 KLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC 1131
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+ G ++ F E + R + + ++ Y L L ++G E F M ++G
Sbjct: 1132 RFGRLKEALEFFKEMEGRGISADVYT---YNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 1188
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLD 350
D + LI +V A+++ + KG ++P++ LM G +E
Sbjct: 1189 DAFTFTILIDGLCKEGKVGEAQQILELMRHKG--KEPDILTYNTLMNGLCLVGQLEDATK 1246
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ ES+ + +K++ ++NG+ K + A + +E++ +G P VTY ++I A C
Sbjct: 1247 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALC 1306
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ A+K+F+EMQ G + Y ++ K G + +AM L +K +PN+
Sbjct: 1307 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIE 1366
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+++ L+D RA L + K + E+ + + PD ++Y +I+ VK +
Sbjct: 1367 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQM 1426
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL-------------Y 577
G + D +++ K ++I E ++LL++M++ DE + +
Sbjct: 1427 EEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQW 1486
Query: 578 HSAMNALRDA 587
H+A+ +L +A
Sbjct: 1487 HAALVSLPNA 1496
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/488 (19%), Positives = 203/488 (41%), Gaps = 43/488 (8%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
E P T L+ + + + ++ + + PD +T + L+ C R
Sbjct: 941 EPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCG 1000
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ F+ G E + + + G + + ++++M G++ D+ Y ++
Sbjct: 1001 FGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILING 1060
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K + L ++ + + Y ++ D+L K G EAL F +M GI
Sbjct: 1061 LCK----ARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGI 1116
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
L D +Y+SL+ +K A E FKE E +G+ D V Y
Sbjct: 1117 LPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISAD-------VYTY----------- 1158
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL-ISQGCIPGQVTYASIINAY 409
++++G S R G W V + L + +G P T+ +I+
Sbjct: 1159 -----------------NSLIHGLS-RAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 1200
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ +A+++ M+ KG + ++ Y++++ G++ DA L + +G + NV
Sbjct: 1201 CKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV 1260
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
+ YN L++ + + + + + + ++EM + + P V+Y T+I A ++ K + E
Sbjct: 1261 FSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 1320
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ G + + +++ K +EE + L Q +K K + ++ ++ + AG
Sbjct: 1321 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAG- 1379
Query: 590 QMQAQWLQ 597
+++ W Q
Sbjct: 1380 KLEEAWKQ 1387
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 148/328 (45%), Gaps = 3/328 (0%)
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+A++ F +M +KG+L D Y LI + LA +L ++ KG + ++
Sbjct: 1034 DAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM--KGNCKGDVFTYGMI 1091
Query: 337 LMYI-EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ + ++G+ + LD+ M A + + ++++G + A++ ++++ +G
Sbjct: 1092 IDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGI 1151
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
TY S+I+ R L+ + M +GF ++ ++ K G++ +A
Sbjct: 1152 SADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQ 1211
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
++ M+ KG EP++ YN+LM+ L KL++ + R + + SY +I+ Y
Sbjct: 1212 ILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYC 1271
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+ ++ D +F+ E R G ++G + ++ KL +M++ G L
Sbjct: 1272 KDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLS 1331
Query: 576 LYHSAMNALRDAGLQMQAQWLQQNFEGT 603
Y ++ L G +A L Q+ + T
Sbjct: 1332 TYCVLLDGLCKNGHLEEAMDLFQSIKKT 1359
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 170/404 (42%), Gaps = 17/404 (4%)
Query: 82 KFDSFLHGML-----KDPQTQELAYDYYNE---AKKLPEFRPEKSTLKLLIRYLVQSKKW 133
K D F +GM+ KD T E A D ++E A LP+ S + L R+ +
Sbjct: 1082 KGDVFTYGMIIDALCKDGMTTE-ALDMFSEMIGAGILPDVVVYSSLMDGLCRF----GRL 1136
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
+ ++ + + D +T + L+ RA +K L + + G F
Sbjct: 1137 KEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTIL 1196
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G K + E M+ G D Y +M +G E LF R +
Sbjct: 1197 IDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGI 1256
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
FS Y IL + K + EA +FF +M+ KG+ Y +LI + V+
Sbjct: 1257 KLNVFS---YNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRT 1313
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A++LF E + G L+ + G +E+ +D+ +S+K + K + + +++
Sbjct: 1314 AQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLD 1373
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G + A K ++++ G P + Y +IN C + S+A K+ +M++KG
Sbjct: 1374 GMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLP 1433
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ ++ ++ K I +A+ L+ +M+ + P+ + + L+
Sbjct: 1434 DSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 107/271 (39%), Gaps = 15/271 (5%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQE---LAYDYYNEAKKLPEFRPEKSTLK 121
+EL R H+ PD +++ ++G+ Q ++ L + KL F +
Sbjct: 1213 LELMR---HKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF-----SYN 1264
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+LI + +K D E+ + + P T + L+ + ++ + + A L T
Sbjct: 1265 ILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTC 1324
Query: 182 GE-IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G+ + L + + G K + +++ +K + + +++ + G E+
Sbjct: 1325 GQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEA 1384
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
F E L+ T Y IL + L G EA+K M+EKG L D + +
Sbjct: 1385 WKQFDEISKNGLEP---DTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVI 1441
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
I + E+ A +L +E + D V
Sbjct: 1442 IQNLLKENEIHEAIQLLEEMRNRNFSPDEAV 1472
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 190/416 (45%), Gaps = 7/416 (1%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N+ M GY K ++YE+M+ GI D + ++ YK G LF +
Sbjct: 386 YNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELF---R 442
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
L S +Y + L +G+ EA++F DM EKG+ + S+I +++
Sbjct: 443 DWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAG 502
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
A + +K G++ C ++L ++G +++ D++ M + L ++
Sbjct: 503 FEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFT 562
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++G+ K A ++ ++ ++G P + +++ I+ + L +A + F EM +K
Sbjct: 563 VLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKK 622
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
GF Y+S++ G++ +A+ L +M+ KG P+++ N +++ + ++
Sbjct: 623 GFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSA 682
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+ EM VTPD V+Y T+I Y + + +F N+ +G D I +
Sbjct: 683 FDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQG 742
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA----LRDAGLQMQAQWLQQNF 600
F +I V +L ++ + G + Y++ MNA + D + + A+ L+ F
Sbjct: 743 FCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTDMLDRAMVLTAKLLKMAF 798
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 156/388 (40%), Gaps = 49/388 (12%)
Query: 223 CYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFF 282
C+CQ + Y ++ +S C+ + Y IL ++ GR +AL F
Sbjct: 287 CFCQ--KGYLRVAESLLFVMPKFCCEP--------DVYAYNILINAYRIRGRTSDALGFL 336
Query: 283 RDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YI 340
M + G ++++I +F + V A ++F+ +E G+ P V + LM Y
Sbjct: 337 HLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGL--SPNVAMYNTLMSGYF 394
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNG----------FSKRRGY---------- 380
+ V + + E M++ + +V G + R +
Sbjct: 395 KARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCS 454
Query: 381 ----------WA-----AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
WA A++ E ++ +G P V + S+I AY R A K + M
Sbjct: 455 LYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIM 514
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
G SSM+ K GR+++A L+ KM KG N + L+D + + +
Sbjct: 515 LMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDT 574
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
LW EME R + PD ++++ I ++A + + ++E G V + + +
Sbjct: 575 AGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSL 634
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ ++ E +KL ++M+ +G D
Sbjct: 635 IHGLCNCGKLHEALKLEREMRQKGLLPD 662
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/459 (20%), Positives = 179/459 (38%), Gaps = 95/459 (20%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEA--KKLPEFRPEKSTLKLL 123
EL RD + VPD +D + G+ Q E A + + K +P P +
Sbjct: 439 ELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDE-AMQFLEDMLEKGMP---PSVVAFNSV 494
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG- 182
I ++ D+ + ++ ++P + TCS ++ + + + A LL I G
Sbjct: 495 IAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGL 554
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ +AF + G Y+K+GD+ +
Sbjct: 555 PVNKVAFTVLLDG-----------------------------------YFKVGDTAGAHS 579
Query: 243 LFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
L+ E ++R + D+ FS + D L K+G EA + F +M +KG + + +Y SL
Sbjct: 580 LWYEMEARGICPDAIAFSAFI-----DGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSL 634
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
I + ++ A +L +E +KG+L D ++ + +EG ++ D M +
Sbjct: 635 IHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHI-- 692
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
G P VTY ++I YC++ A++
Sbjct: 693 ---------------------------------GVTPDTVTYNTLIGGYCKVLDMVSADE 719
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM---- 476
+M G+D + Y+ + + + +I A+ ++ ++ A G PN YN++M
Sbjct: 720 FLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVC 779
Query: 477 -DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
DM RA L ++ + P+ V+ ++S +
Sbjct: 780 TDMLDRAMVLT------AKLLKMAFVPNVVTTNVLLSHF 812
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 96/201 (47%), Gaps = 2/201 (0%)
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
C P Y +INAY S A M + G ++ +S+++ + G + +A
Sbjct: 309 CEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEAR 368
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA- 513
+ ++ G PNV +YN+LM + +A+++ Q L++EM + + PD ++ +++
Sbjct: 369 KIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGN 428
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
Y +E D + + ++ ++ V D ++ + V Q++E ++ L+DM +G
Sbjct: 429 YKYGKEAD-SYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPS 487
Query: 574 ERLYHSAMNALRDAGLQMQAQ 594
++S + A AG + A
Sbjct: 488 VVAFNSVIAAYSRAGFEDNAH 508
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 114/264 (43%), Gaps = 1/264 (0%)
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
++ + ++L+++ M+ ++ S + + Y + K+ +I G P
Sbjct: 218 FMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPC 277
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+ +I +C+ AE + M + + V AY+ ++ Y GR DA+ +
Sbjct: 278 NHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLH 337
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
M GC+P++ +++++ N+ + K+++ ++ ++P+ Y T++S Y +AR
Sbjct: 338 LMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKAR 397
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ Y E R G D A I+V K + + +L +D D LY
Sbjct: 398 DVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYD 457
Query: 579 SAMNALRDAG-LQMQAQWLQQNFE 601
++ L AG L Q+L+ E
Sbjct: 458 VSVAGLCWAGQLDEAMQFLEDMLE 481
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 140/348 (40%), Gaps = 53/348 (15%)
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD-P 329
S A+E+L+ M+E G+ S + L + + +L + GM+RD P
Sbjct: 220 NSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLR-----GMIRDGP 274
Query: 330 EVCLK----LVLMYIEEGLVEKTLDVVESMKNAKLKI---SDCISCAI-VNGFSKRRGYW 381
C ++L + ++G L V ES+ K D + I +N + R
Sbjct: 275 RPCNHNFNIMILCFCQKGY----LRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTS 330
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCR----------------------IALYS--- 416
A+ +I GC P +T+++II A+C +A+Y+
Sbjct: 331 DALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLM 390
Query: 417 ----------KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
+A ++ EM+ KG ++ +VA K G+ D+ L
Sbjct: 391 SGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLV 450
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+ +Y+ + A L + + ++M + + P V++ +VI+AY+RA D K
Sbjct: 451 PDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKA 510
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
Y M G V + M+ SK +++E LL M +G +++
Sbjct: 511 YKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNK 558
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 212/473 (44%), Gaps = 7/473 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
R + ++ +++ L Q + W + + F+ V P+A+ C+ L+A+ R+ A
Sbjct: 178 LRVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRRLSQAL 237
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L + G E + FN+ M + + + ++E+M+ GIV D + ++ A
Sbjct: 238 KLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSAT 297
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
G ++ + ++R H Y + + ++ + EA F+ M E+G
Sbjct: 298 TAAGLWDRAQSFIDMMQARGFS---IGLHEYIEMQWACARARKPREAYGLFQVMLEQGYE 354
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
Y +L+C++ + + A F ++KG+ D L+ G E+ L+V
Sbjct: 355 LKLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEV 414
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+E MK + + + C ++ + K + A +++ ++ GC P +V + S+++AY +
Sbjct: 415 LERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEK 474
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ K ++++ G VVA+S+ ++ K G+ A +M GC PN+
Sbjct: 475 GRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVT 534
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y+SL+ +G + E ++K M R + P+ + ++ AY + +E + + F+
Sbjct: 535 YSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESME 594
Query: 532 MNGGV-IDR-AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
GV D+ A A I ++ + + VK + M+ G D +Y + +N
Sbjct: 595 PQYGVEPDKYAYAAIFWACWT-CGEWQRAVKYIDRMEMAGCTPDSVIYTTLIN 646
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 150/330 (45%)
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L +LG R +ALK FR M++ GI + +L+ + A ELF+E E+ G
Sbjct: 223 LIAALGCGRRLSQALKLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLG 282
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
++ D LV GL ++ ++ M+ I + ++ R A
Sbjct: 283 IVPDRITFTGLVSATTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAY 342
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+++ ++ QG +Y +++ AY R A + A + FI +Q KG V+++SS+++
Sbjct: 343 GLFQVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISAC 402
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
G+ A+ ++ +MK C+PNV + L+ + + N + E+++ M P++
Sbjct: 403 ANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNE 462
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
V++ +++SAY + R++ + + G +D + +K Q E + +
Sbjct: 463 VAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQ 522
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
M G + Y S + A D GL +A+
Sbjct: 523 MTKSGCLPNIVTYSSLIKAYGDVGLWEKAE 552
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 100/246 (40%), Gaps = 40/246 (16%)
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
DV++ + L++ +V + + ++AA KV+ S G P NAY
Sbjct: 168 DVMKIVNETGLRVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEP---------NAY 218
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C ++++A G R+ A+ L M+ G E +
Sbjct: 219 V----------------------C----TTLIAALGCGRRLSQALKLFRWMEKAGIERPI 252
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
+ +N+LM GR + +L++EME+ + PD++++T ++SA A +D F +
Sbjct: 253 FTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSATTAAGLWDRAQSFIDM 312
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ G I M ++ + E L Q M +G +L Y++ + A
Sbjct: 313 MQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGYELKLESYNALLCA-----Y 367
Query: 590 QMQAQW 595
+ AQW
Sbjct: 368 ERTAQW 373
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 181/377 (48%), Gaps = 8/377 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGD---SEKVAALFLECKSRKLDSTPFSTHMYKI 264
V M+ AG ++ Y ++ A+ + G+ +E+V +L E + K + F++
Sbjct: 174 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS----- 228
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
+ + L K+GR A K F +M +G+ D Y +L+ + + + + +F E ++G
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
++ D L+ + G +E+ + +V M+ L++++ A+++GF K+ A+
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
E++ G P V Y ++IN YC++ A ++ EM+ K VV YS++++ Y
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K G + A L KM KG P+ Y+SL+ K L +L++ M + V PD+
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+YTT+I + + + + ++E G + D +++ SK ++ +E +LL
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528
Query: 565 MKSEGTKLDERLYHSAM 581
+ E D Y + M
Sbjct: 529 LYHEDPVPDNIKYDALM 545
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 213/500 (42%), Gaps = 44/500 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +L+R L + + V + D + P+A T + LVA+ RA + A +
Sbjct: 150 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 209
Query: 175 LQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+ + +G L+ FNS + G K V+++M G+ D Y ++ Y
Sbjct: 210 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 269
Query: 233 KIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K+G + A+F E R L D F++ L + K+G +A+ M+E+G+
Sbjct: 270 KVGCLHESLAVFSEMTQRGLVPDVVTFTS-----LIHATCKAGNLEQAVALVAQMRERGL 324
Query: 291 LEDPSIYASLI---CSFASITEVKLAEELFKEAEEKGMLRDPEVCLK-LVLMYIEEGLVE 346
+ + +LI C + + LA E + K ++ VC L+ Y + G ++
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMR----KCGIQPSVVCYNALINGYCKLGRMD 380
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+++ M+ ++K I++G+ K +A ++ ++++ +G +P +TY+S+I
Sbjct: 381 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 440
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
C + A ++F M Q G Y++++ + K G + A+ L +M KG
Sbjct: 441 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 500
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+V Y+ L++ ++ ++ +L ++ PD + Y ++ ++A EF V
Sbjct: 501 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA-EFKSVVAL 559
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY------HSA 580
F M G ++E K+ Q M KLD +Y H
Sbjct: 560 LKGFCMKG-------------------LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCR 600
Query: 581 MNALRDAGLQMQAQWLQQNF 600
+R A L Q L+ F
Sbjct: 601 GGNVRKA-LSFHKQMLRSGF 619
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 188/452 (41%), Gaps = 61/452 (13%)
Query: 115 PEKSTLKLLIRYLVQSKKWDS---IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
P T L+ ++ + D +VSL + N P+ T + +V +A + + A
Sbjct: 185 PNAVTYNTLVAAFCRAGELDGAERVVSLMREEG--NAKPNLVTFNSMVNGLCKAGRMEGA 242
Query: 172 NTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ + +G ++++N+ + GY K+ + ++ V+ +M G+V D + ++ A
Sbjct: 243 RKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHA 302
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K G+ E+ AL + + R L + + L D K G +AL +M++ GI
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNEVT---FTALIDGFCKKGFLDDALLAVEEMRKCGI 359
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
Y +LI + + + LA EL +E E K + D ++ Y + G ++
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419
Query: 351 VVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+ + M K + D I+ +++ G + + A +++E ++ G P + TY ++I+ +
Sbjct: 420 LNQKMLK-KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 478
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ KA + EM +KG VV YS ++ K+ R ++A L+ K+ + P+
Sbjct: 479 CKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 538
Query: 470 ---------------------------------------------W-----IYNSLMDMH 479
W +Y+ L+ H
Sbjct: 539 IKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 598
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
R N+R+ K+M R +P+ S +++
Sbjct: 599 CRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 630
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 172/413 (41%), Gaps = 27/413 (6%)
Query: 75 TAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
A P+ F+S ++G+ K + E A ++E + P+ + L+ +
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGR-MEGARKVFDEMVR-EGLAPDVVSYNTLLSGYCKVGCLH 275
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAM 193
+++ + ++PD T + L+ + +A + A L+ G + + F + +
Sbjct: 276 ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 335
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRK 251
G+ K +L E+M+ GI CY ++ Y K+G + L +E K K
Sbjct: 336 DGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK 395
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
D +ST + K G A + + M +KG+L D Y+SLI +
Sbjct: 396 PDVVTYST-----IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 450
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI- 370
A ELF+ + G+ D L+ + +EG VEK L + + M K + D ++ ++
Sbjct: 451 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR-KGVLPDVVTYSVL 509
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY---------------ASIINAYCRIALY 415
+NG SK A ++ +L + +P + Y +++ +C L
Sbjct: 510 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLM 569
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+A+KV+ M + + YS ++ + + G +R A+ +M G PN
Sbjct: 570 KEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 622
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 64/348 (18%), Positives = 133/348 (38%), Gaps = 21/348 (6%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VPD F S +H K ++ ++ R + T LI + D
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRER--GLRMNEVTFTALIDGFCKKGFLDDA 347
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGG 195
+ E+ + + P + L+ + + +A L+ ++ + ++ +++ + G
Sbjct: 348 LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISG 407
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
Y K+ S + +KM G++ D+ Y ++ + LF +
Sbjct: 408 YCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD 467
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
F+ Y L D K G +AL +M KG+L D Y+ LI + K A
Sbjct: 468 EFT---YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 524
Query: 316 L-FKEAEEKGMLRDPE-----VC---------LKLVLMYIEEGLVEKTLDVVESMKNAKL 360
L FK E + + + +C + L+ + +GL+++ V +SM +
Sbjct: 525 LLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNW 584
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
K+ + +++G + A+ ++Q++ G P + S++
Sbjct: 585 KLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRG 632
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 185/429 (43%), Gaps = 5/429 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
P+ LI +++ D+ + L + + P ++ + L++S AR+ A
Sbjct: 217 LEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAE 276
Query: 173 TLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
L F GEI A+N+ + GY K+ + V ++M G+ D Y +++A
Sbjct: 277 ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDA 336
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y + G E L E ++ D S++++ + G +A R+M G+
Sbjct: 337 YTRAGRWESARILLKEMEA---DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGV 393
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
D Y +I +F + A + F E+G+ D L+ + + G ++ ++
Sbjct: 394 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIE 453
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ + M+ + + ++N + + + + ++ QG +P +TY ++++ Y
Sbjct: 454 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 513
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
R + +A M+ G Y ++V Y + G A+ +V M+A G E +
Sbjct: 514 RSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTV 573
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+ NSL++ G + + + + + M+ + PD ++YTT++ A R +F+ Y E
Sbjct: 574 VLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEM 633
Query: 531 RMNGGVIDR 539
+G DR
Sbjct: 634 ITSGCAPDR 642
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 195/452 (43%), Gaps = 24/452 (5%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA----FNSAMGGYNKLHM 201
++ LPD + S L+A + R A L ++ E L F+ + + + +
Sbjct: 177 HSFLPDLASYSHLLALLLNTRDPPEAALLDRLLGDLRESRLEPDAPLFSDLISAFARARL 236
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA---ALFLE------CKSRKL 252
+ + + ++ G+ S ++ + +G + +VA ALFLE K R
Sbjct: 237 PDAALELLASAQAIGLTPRSNAVTALISS---LGSARRVAEAEALFLEFFLAGEIKPR-- 291
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
T Y L K G A + +M + G+ D + Y+ L+ ++ +
Sbjct: 292 ------TRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWES 345
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L KE E G+ V +++ + + G +K V+ M + ++ +++
Sbjct: 346 ARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMID 405
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
F K A+ ++++ +G P VT+ ++I+A+C+ + +A ++F EM++
Sbjct: 406 TFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPL 465
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
Y+ M+ + G+ R ++A+MK +G PN+ Y +L+D++GR+ ++
Sbjct: 466 GTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCI 525
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+ M+ + P Y +++AY + D + R +G + ++ F +
Sbjct: 526 EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGED 585
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+I E +LQ MK G + D Y + M AL
Sbjct: 586 RRIAEAFSVLQFMKENGLRPDVITYTTLMKAL 617
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 137/321 (42%), Gaps = 9/321 (2%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE----AEEKGMLRDPEVCL 333
AL+ + G+ + +LI S S V AE LF E E K R L
Sbjct: 240 ALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALL 299
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY-EQLIS 392
K Y++ G ++ V++ M + + +V+ ++ R G W + ++ +++ +
Sbjct: 300 K---GYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYT-RAGRWESARILLKEMEA 355
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
G P ++ I+ + + KA V EM G Y+ M+ +GK +
Sbjct: 356 DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGH 415
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
AM +M+ +G EP+V +N+L+D H + + +L+ EM +Y +I+
Sbjct: 416 AMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMIN 475
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ ++ E + G V + +V V+ + + +E V ++ MK++G K
Sbjct: 476 LLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKP 535
Query: 573 DERLYHSAMNALRDAGLQMQA 593
+YH+ +NA GL A
Sbjct: 536 SPTMYHALVNAYAQRGLADHA 556
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 185/429 (43%), Gaps = 5/429 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
P+ LI +++ D+ + L + + P ++ + L++S AR+ A
Sbjct: 217 LEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAE 276
Query: 173 TLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
L F GEI A+N+ + GY K+ + V ++M G+ D Y +++A
Sbjct: 277 ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDA 336
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y + G E L E ++ D S++++ + G +A R+M G+
Sbjct: 337 YTRAGRWESARILLKEMEA---DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGV 393
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
D Y +I +F + A + F E+G+ D L+ + + G ++ ++
Sbjct: 394 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIE 453
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ + M+ + + ++N + + + + ++ QG +P +TY ++++ Y
Sbjct: 454 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 513
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
R + +A M+ G Y ++V Y + G A+ +V M+A G E +
Sbjct: 514 RSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTV 573
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+ NSL++ G + + + + + M+ + PD ++YTT++ A R +F+ Y E
Sbjct: 574 VLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEM 633
Query: 531 RMNGGVIDR 539
+G DR
Sbjct: 634 ITSGCAPDR 642
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 196/452 (43%), Gaps = 24/452 (5%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA----FNSAMGGYNKLHM 201
++ LPD + S L+AS + R A L ++ E L F+ + + + +
Sbjct: 177 HSFLPDLASYSHLLASLLNTRDPPDAALLDRLLGDLRESRLEPDAPLFSDLISAFARARL 236
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA---ALFLE------CKSRKL 252
+ + + ++ G+ S ++ + +G + +VA ALFLE K R
Sbjct: 237 PDAALELLASAQAIGLTPRSNAVTALISS---LGSARRVAEAEALFLEFFLAGEIKPR-- 291
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
T Y L K G A + +M + G+ D + Y+ L+ ++ +
Sbjct: 292 ------TRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWES 345
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L KE E G+ V +++ + + G +K V+ M + ++ +++
Sbjct: 346 ARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMID 405
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
F K A+ ++++ +G P VT+ ++I+A+C+ + +A ++F EM++
Sbjct: 406 TFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPL 465
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
Y+ M+ + G+ R ++A+MK +G PN+ Y +L+D++GR+ ++
Sbjct: 466 GTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCI 525
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+ M+ + P Y +++AY + D + R +G + ++ F +
Sbjct: 526 EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGED 585
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+I E +LQ MK G + D Y + M AL
Sbjct: 586 RRIAEAFSVLQFMKENGLRPDVITYTTLMKAL 617
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 137/321 (42%), Gaps = 9/321 (2%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE----AEEKGMLRDPEVCL 333
AL+ + G+ + +LI S S V AE LF E E K R L
Sbjct: 240 ALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALL 299
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY-EQLIS 392
K Y++ G ++ V++ M + + +V+ ++ R G W + ++ +++ +
Sbjct: 300 K---GYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYT-RAGRWESARILLKEMEA 355
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
G P ++ I+ + + KA V EM G Y+ M+ +GK +
Sbjct: 356 DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGH 415
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
AM +M+ +G EP+V +N+L+D H + + +L+ EM +Y +I+
Sbjct: 416 AMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMIN 475
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ ++ E + G V + +V V+ + + +E V ++ MK++G K
Sbjct: 476 LLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKP 535
Query: 573 DERLYHSAMNALRDAGLQMQA 593
+YH+ +NA GL A
Sbjct: 536 SPTMYHALVNAYAQRGLADHA 556
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 178/379 (46%), Gaps = 9/379 (2%)
Query: 212 MKSAGIVLDSGC---YCQIMEAYYKIGDSEKV---AALFLECKSRKLDSTPFSTHMYKIL 265
M+ G+V SG ++ +GDS ++ A+F E K L T Y L
Sbjct: 276 MEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKP---KTRAYNGL 332
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
K+G +A +M+ G+ D Y+ LI ++++ + A + KE E +
Sbjct: 333 LKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNI 392
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ + V +++ Y + G +K+ V++ MKN+ ++ +++ F K A+
Sbjct: 393 MPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMD 452
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+++++S+G P VT+ ++I+ +C+ L+ +AE++F EM +KGF CV ++ M+ +G
Sbjct: 453 TFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFG 512
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+ R D L+ M++ G PNV Y +L+D++G++ + ++M+ + P
Sbjct: 513 EQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSST 572
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
Y +I+AY + + V + R + ++ F + + E +L+ M
Sbjct: 573 MYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYM 632
Query: 566 KSEGTKLDERLYHSAMNAL 584
K K D Y + M AL
Sbjct: 633 KENDLKPDVVTYTTLMKAL 651
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/424 (20%), Positives = 194/424 (45%), Gaps = 7/424 (1%)
Query: 174 LLQVFITDGEIAL--LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L + F+ + AL L +N+ + + + I + +M+ G D Y I+++
Sbjct: 170 LYEAFLLSQQQALSPLTYNALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSL 229
Query: 232 YKIG--DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
+ DS + L+ E + KL+ + + K+G +A++F ++ G
Sbjct: 230 VRSNRIDSPILQKLYSEIQCDKLE---LDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASG 286
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
+ + ++I + + AE +F+E ++ G+ L+ Y++ G+++
Sbjct: 287 LSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAE 346
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+V M+ + + +C +++ +S + +A V +++ + +P ++ I+ +Y
Sbjct: 347 FIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASY 406
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ K+ +V EM+ G Y+ M+ +GK + AM KM ++G +P+
Sbjct: 407 RDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDT 466
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
+N+L+D H +A+ + E+L++EM + +P ++ +I+++ +D
Sbjct: 467 VTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGN 526
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
R G + + ++ ++ K + + ++ L+DMKS G K +Y++ +NA GL
Sbjct: 527 MRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGL 586
Query: 590 QMQA 593
QA
Sbjct: 587 SEQA 590
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 159/342 (46%), Gaps = 15/342 (4%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y IL +LG+S + +EA F +++ + P Y +LI + A +++ A L
Sbjct: 156 LYSILIHALGRSEKLYEA---FLLSQQQAL--SPLTYNALINACARNNDLEKAINLISRM 210
Query: 321 EEKGMLRDPEVCLKLVLM------YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
+ G D V L++ I+ +++K + ++ KL++ +S I+ GF
Sbjct: 211 RQDGYPSD-FVNYSLIIQSLVRSNRIDSPILQK---LYSEIQCDKLELDVQLSNDIIVGF 266
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+K A++ + + G P T ++I+A +AE +F EM+ G
Sbjct: 267 AKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKT 326
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
AY+ ++ Y K G ++DA ++V++M+ G P+ Y+ L+D + A + KE
Sbjct: 327 RAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKE 386
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
ME + P+ ++ ++++Y E+ + E + +G DR +M+ F K S
Sbjct: 387 MEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSC 446
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ + M SEG + D +++ ++ A L +A+ L
Sbjct: 447 LDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEEL 488
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 141/316 (44%), Gaps = 4/316 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T LLI + +W+S + ++ + N++P+++ SR++AS +++ + +
Sbjct: 359 PDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQV 418
Query: 175 LQVFITDGEIALLAF-NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ G F N + + K + ++KM S GI D+ + +++ + K
Sbjct: 419 LKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCK 478
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
E+ LF E + +P T + I+ +S G+ R + +M+ G+L +
Sbjct: 479 AELHERAEELFEEMMEKGF--SPCVT-TFNIMINSFGEQERWDDVKTLMGNMRSLGLLPN 535
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y +LI + A E ++ + G+ + L+ Y ++GL E+ ++
Sbjct: 536 VVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFR 595
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M+ LK S +++N F + R A V + + P VTY +++ A R+
Sbjct: 596 LMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVD 655
Query: 414 LYSKAEKVFIEMQQKG 429
++K V+ EM G
Sbjct: 656 KFNKVPSVYEEMILAG 671
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/209 (18%), Positives = 91/209 (43%), Gaps = 7/209 (3%)
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
C ++ Y+ +I+A R K + F+ QQ+ + Y++++ + + A+
Sbjct: 150 CFSYELLYSILIHALGR---SEKLYEAFLLSQQQALSP--LTYNALINACARNNDLEKAI 204
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ--VEKLWKEMERRKVTPDKVSYTTVIS 512
L+++M+ G + Y+ ++ R+ + ++KL+ E++ K+ D +I
Sbjct: 205 NLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIV 264
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ +A + + ++F + +G A ++ +I E + ++MK G K
Sbjct: 265 GFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKP 324
Query: 573 DERLYHSAMNALRDAGLQMQAQWLQQNFE 601
R Y+ + AG+ A+++ E
Sbjct: 325 KTRAYNGLLKGYVKAGMLKDAEFIVSEME 353
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 221/453 (48%), Gaps = 14/453 (3%)
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARK-FKIANTLLQVFITDG-EIALLAFNSA 192
SIV+L+ K Y +P + + ++ + +R ++ KIA + + + G + +N
Sbjct: 153 SIVNLA---KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNIL 209
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY---YKIGDSEKVAALFLECKS 249
+ G+ + + +M+ G + + Y I++AY KIG++ K+ L
Sbjct: 210 IRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLM---AL 266
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
+ L+ S Y ++ + L + G+ E + +M ++ + D + +LI + ++
Sbjct: 267 KGLNPNLIS---YNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGN 323
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
A L E + G+ + L+ + G + + ++ ++ M++ L +
Sbjct: 324 FHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++GFS++ A ++ ++++ G P +TY ++IN +C + A + EM ++G
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
F VV+YS++++ + + + A L +M AKG P+V Y+SL+ + + L +V
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
L++EM + PD+V+YT++I+AY + D ++ ++E G D +++ F
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+K S+ +E +LL + E + +E Y++ ++
Sbjct: 564 NKQSRTKEAKRLLLKLLYEESVPNEITYNTLID 596
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 182/396 (45%), Gaps = 13/396 (3%)
Query: 213 KSAGIVLDSGCYCQIMEAYYKIGDSEKVA-ALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
KS G + Y I++A + S K+A +F E + ++ Y IL
Sbjct: 159 KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYT---YNILIRGFCT 215
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+G L FF +M+ G L + Y ++I ++ + ++ A +L + KG+ +P +
Sbjct: 216 AGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGL--NPNL 273
Query: 332 CLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
V++ EG +++T +++E M + ++NG+ + A+ ++ +
Sbjct: 274 ISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAE 333
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
++ G P VTY ++IN+ C+ ++A + +M+ +G Y++++ + + G
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
++ A ++ +M G P + YN+L++ H + L +EM R PD VSY+T
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+IS + R +E + + E G D A ++ K ++ E+ L Q+M S G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 570 TKLDERLYHSAMNAL-----RDAGLQMQAQWLQQNF 600
DE Y S +NA D L++ + +Q+ F
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGF 549
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/514 (21%), Positives = 223/514 (43%), Gaps = 27/514 (5%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P +++ L +++ Q+ ++A + E + P T +LIR + +
Sbjct: 164 MPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVE-SGVSPNVYTYNILIRGFCTAGNLEMG 222
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+ + + LP+ T + ++ + + RK A LL++ G L+++N + G
Sbjct: 223 LXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ T + E+M V D + ++ Y +G+ + AL L + K +
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQ--ALVLHAEMVKNGLS 340
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P + Y L +S+ K+G A++F M+++G+ + Y +LI F+ +K A +
Sbjct: 341 P-NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQ 399
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGF 374
+ KE E G L+ + G +E +++ M I D +S I++GF
Sbjct: 400 IMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGF-IPDVVSYSTIISGF 458
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+ + A ++ +++++G P TY+S+I C+ + +F EM G
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDE 518
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V Y+S++ Y G + A+ L +M KG P++ YN L++ + ++ ++L +
Sbjct: 519 VTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLK 578
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+ + P++++Y T+I N EF + F M G
Sbjct: 579 LLYEESVPNEITYNTLIDNCNNL-EFKSALALMKGFCMKG-------------------L 618
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ E ++L+ M +G KL+E +Y+ ++ G
Sbjct: 619 MNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVG 652
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/509 (18%), Positives = 195/509 (38%), Gaps = 58/509 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ ++ ++G+ ++ Q +E + +K+ + P++ T LI + +
Sbjct: 271 PNLISYNVVINGLCREGQMKETSEILEEMSKR--RYVPDRVTFNTLINGYCNVGNFHQAL 328
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L + + P+ T + L+ S +A A L G + + + G+
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGF 388
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
++ + ++M G Y ++ + +G E + L E R
Sbjct: 389 SQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDV 448
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
S Y + ++ +A + +M KGI D + Y+SLI + +L
Sbjct: 449 VS---YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDL 505
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F+E G+ D L+ Y EG ++K L + + M ++NGF+K
Sbjct: 506 FQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNK 565
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIIN---------------AYCRIALYSKAEKV 421
+ A ++ +L+ + +P ++TY ++I+ +C L ++A++V
Sbjct: 566 QSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRV 625
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
M QKG+ Y+ ++ + K G I A YN
Sbjct: 626 LESMLQKGYKLNEEVYNVIIHGHSKVGNIEKA------------------YN-------- 659
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVI-SAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
L+KEM P V+ + S Y+ +E ++ + + + + + A
Sbjct: 660 ---------LYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELN-QLLDYTLKSCRITEAA 709
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+A +++G+ SK ++ + +L+DM G
Sbjct: 710 LAKVLIGINSKEGNMDAVFNVLKDMALSG 738
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/516 (21%), Positives = 215/516 (41%), Gaps = 8/516 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + +HG + +T + ++ ++ +P+ T L+I L +++ D
Sbjct: 263 PDVVAYSTVIHGFFNEGETGKACSLFHEMTRQ--GVKPDVVTYNLIIDALCKARAMDKAE 320
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+ PD T S ++ + K A + + G I ++ NS +
Sbjct: 321 LVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASL 380
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K ++ M + G D YC ++ Y G + LF KS + +
Sbjct: 381 CKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAA-- 438
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ H++ IL + K G +A+ F +M+++G+ D Y+++I +F+ + + A E
Sbjct: 439 -NCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEK 497
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFS 375
F + +G+ + V ++ + G + K ++V M N + D + +++N
Sbjct: 498 FNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLC 557
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A +++ G PG +T+ S+I+ YC + KA K+ M+ G + +V
Sbjct: 558 KDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIV 617
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y++++ Y K GRI D + L +M+ KG +PN Y ++ RA K + EM
Sbjct: 618 TYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM 677
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
T Y ++ R D + + + I M+ K+ +
Sbjct: 678 IESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRK 737
Query: 556 EELVKLLQDMKSEGTKLDERLYHSA-MNALRDAGLQ 590
EE +L + + G +E Y +N L+D G++
Sbjct: 738 EEAKELFATISASGLLPNESTYGVMIINLLKDGGVE 773
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/510 (20%), Positives = 220/510 (43%), Gaps = 5/510 (0%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VP+A + L + + +Q AK+ P+ +I +
Sbjct: 225 VPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKA 284
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
SL + V PD T + ++ + +AR A +L+ TDG + + ++ + G
Sbjct: 285 CSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHG 344
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
Y L ++ +MK G++ + + + K G S++ A F ++
Sbjct: 345 YATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPD 404
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
FS Y L G + + F MK GI + ++ LI ++A V A
Sbjct: 405 IFS---YCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAML 461
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F E +++G+ D ++ + G + ++ M ++ + + +I+ GF
Sbjct: 462 IFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFC 521
Query: 376 KRRGYWAAVKVYEQLISQGCI-PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
G A ++ ++I++G P V ++S+IN+ C+ A +F G V
Sbjct: 522 MHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGV 581
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ ++S++ Y G++ A ++ M+ G EP++ YN+L+D + + + L++E
Sbjct: 582 ITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFRE 641
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+R+ V P+ V+Y +++ RA K ++E +G + +I GI++G + +
Sbjct: 642 MQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNC 701
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+E + L Q + + K + ++ +NA+
Sbjct: 702 ADEAIILFQKLGTMNVKFSITILNTMINAM 731
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 170/407 (41%), Gaps = 39/407 (9%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLE--------------------CKSRKLDSTPF------ 257
Y ++ ++ G++ K +LF E CK+R +D
Sbjct: 268 YSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMT 327
Query: 258 ------STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
T Y + GR EA K FR+MK++G++ + S + S K
Sbjct: 328 TDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSK 387
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A E F KG D L+ Y EG + + SMK+ + + + ++
Sbjct: 388 EAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILI 447
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ ++KR A+ ++ ++ QG P VTY+++I+ + R+ + A + F +M +G
Sbjct: 448 HAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQ 507
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC-EPNVWIYNSLMDM---HGRAKNLRQ 487
YSS++ + G + A LV++M KG P++ ++S+++ GR +
Sbjct: 508 PNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHD 567
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+ L ++ R P +++ ++I Y + D K + + G D ++
Sbjct: 568 IFDLATDIGER---PGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLD 624
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ K +I + + L ++M+ +G K + Y + L AG + A+
Sbjct: 625 GYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAAR 671
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 155/355 (43%), Gaps = 22/355 (6%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--CSFASITEVKLAEELFKE 319
Y IL D ++ R L F + G+ D +L+ +A+ TE + L
Sbjct: 160 YNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTE-EAVNVLLHR 218
Query: 320 AEEKGMLRDPEVCLKLVLMYI-EEGLVEKTLDVVESM-KNAKLKISDCIS-CAIVNGFSK 376
E G + + V +VL + + + ++ LD+++ M K D ++ +++GF
Sbjct: 219 MSELGCVPN-AVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFN 277
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A ++ ++ QG P VTY II+A C+ KAE V +M G V
Sbjct: 278 EGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVT 337
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM---HGRAKNLRQVEKLWK 493
YS M+ Y GR+++A + +MK +G PN+ NS + HGR+K + + +
Sbjct: 338 YSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSK---EAAEFFD 394
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
M + PD SY T++ Y F + +N + NG + + I++ ++K
Sbjct: 395 SMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRG 454
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL---------QMQAQWLQQN 599
+++ + + +M+ +G D Y + ++ G QM A+ +Q N
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPN 509
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 151/349 (43%), Gaps = 8/349 (2%)
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALK-FFRDMKEKGILEDPSIYASLICSFASITE 309
K+D +T + K LC + R EA+ M E G + + Y+ ++ + +
Sbjct: 189 KMDQITANT-LLKCLC----YANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSM 243
Query: 310 VKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+ A +L + ++G P+V ++ + EG K + M +K
Sbjct: 244 SQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTY 303
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
I++ K R A V Q+ + G P VTY+ +I+ Y + +A K+F EM++
Sbjct: 304 NLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKK 363
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
+G +V +S +A K GR ++A M AKG +P+++ Y +L+ +
Sbjct: 364 RGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFAD 423
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+ L+ M+ + + +T +I AY + D + + E + G D ++
Sbjct: 424 MIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIS 483
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
FS++ ++ + ++ M + G + + +Y S + G ++A+ L
Sbjct: 484 TFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKEL 532
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 90/501 (17%), Positives = 198/501 (39%), Gaps = 17/501 (3%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
R+ + +P+ +SFL + K +++E A + + K +P+ + L+
Sbjct: 359 REMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAK--GHKPDIFSYCTLLHGYA 416
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALL 187
+ ++ L K + + H + L+ + + A + G ++
Sbjct: 417 SEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVV 476
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+++ + ++++ + + +M + GI ++ Y I++ + G K L E
Sbjct: 477 TYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEM 536
Query: 248 KSRKL---DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLIC 302
++ + D FS+ + +SL K GR +A F + G E P + + SLI
Sbjct: 537 INKGIPRPDIVFFSS-----VINSLCKDGRVMDAHDIFDLATDIG--ERPGVITFNSLID 589
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ + ++ A ++ E G+ D L+ Y + G + L + M+ +K
Sbjct: 590 GYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKP 649
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
+ ++ G + AA K + ++I G Y I+ CR +A +F
Sbjct: 650 NTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILF 709
Query: 423 IEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
++ + ++M+ AMY K R +A L A + A G PN Y ++ +
Sbjct: 710 QKLGTMNVKFSITILNTMINAMY-KVQRKEEAKELFATISASGLLPNESTYGVMIINLLK 768
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ ++ ME+ + P +I E + ++ +++ +
Sbjct: 769 DGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEAST 828
Query: 542 AGIMVGVFSKLSQIEELVKLL 562
+M+ +FS+ + +E +KLL
Sbjct: 829 TSLMLSLFSRKGKYQEDIKLL 849
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 179/414 (43%), Gaps = 22/414 (5%)
Query: 169 KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
K N +L ++ +++F + G+ K Y I +M G V D+ Y +++
Sbjct: 440 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVI---HEMMGNGFVPDTSTYSEVI 496
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
E LF E K + P + Y IL D K+G +A + +M
Sbjct: 497 GFLCNASRVENAFFLFKEMKGTGV--VP-DVYTYTILIDCFSKAGIIKQAHNWLDEMVRD 553
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G Y +LI ++ +V +A ELF+ KG + L+ Y + G +EK
Sbjct: 554 GCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKA 613
Query: 349 LDVVESMK--------NAKLKISDCIS--------CAIVNGFSKRRGYWAAVKVYEQLIS 392
+ M+ + KI + ++ A+V+G K A + E +
Sbjct: 614 CQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFV 673
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
GC P + Y ++I+ +C+ A +A++VF +M + G++ V YSS++ K R+
Sbjct: 674 DGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDL 733
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
+ +++KM C PN+ IY ++D + + KL ME + P+ V+YT +I
Sbjct: 734 VLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMID 793
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+ +A + D C++ + E G + +++ ++E LL++MK
Sbjct: 794 GFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMK 847
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/505 (20%), Positives = 221/505 (43%), Gaps = 36/505 (7%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
+F P +I L ++ ++ + + + +P+ T L+ C+ ++
Sbjct: 303 DFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRC 362
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSA---------GIVLDS 221
+L + I +G + FNS + Y K + + +KM+ I++ S
Sbjct: 363 KRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGS 422
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKS--RKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
C + +EK L + K++ F+ + LC GK +A+
Sbjct: 423 ICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFA----RCLC-GFGKFEKAY--- 474
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
K +M G + D S Y+ +I + + V+ A LFKE + G++ D L+ +
Sbjct: 475 KVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCF 534
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ G++++ + ++ M + + +++ + K + A +++E +I++GC P
Sbjct: 535 SKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNV 594
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGF----------------DKCVVAYSSMVAM 443
+TY ++I+ YC+ KA +++ M+ VV Y ++V
Sbjct: 595 ITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDG 654
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K +++DA L+ M GCEPN +Y++L+D +A L + ++++ +M P+
Sbjct: 655 LCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPN 714
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+Y+++I + + D+ +K ++ N + I M+ SK+++ +E KL+
Sbjct: 715 VYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLML 774
Query: 564 DMKSEGTKLDERLYHSAMNALRDAG 588
M+ +G K + Y + ++ AG
Sbjct: 775 MMEEKGCKPNVVTYTAMIDGFGKAG 799
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 199/471 (42%), Gaps = 55/471 (11%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ ST +I +L + + ++ L ++ K V+PD +T + L+ +A K A+
Sbjct: 485 FVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAH 544
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L + DG E ++ + + + Y K ++E M + G + Y +++ Y
Sbjct: 545 NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGY 604
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKI---------------LCDSLGKSGRAF 276
K G+ EK ++ + R P +KI L D L K+ +
Sbjct: 605 CKSGNIEKACQIY--ARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVK 662
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+A M G + +Y +LI F ++ A+E+F + E G +P V
Sbjct: 663 DARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGY--NPNV----- 715
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
Y L+++ K+ +L + +KV +++ C
Sbjct: 716 --YTYSSLIDRLF------KDKRLDL--------------------VLKVLSKMLENSCA 747
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P V Y +I+ ++A +A K+ + M++KG VV Y++M+ +GK G++ + L
Sbjct: 748 PNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLEL 807
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+M +KGC PN Y L++ +L + L +EM++ SY VI Y
Sbjct: 808 FREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYK- 866
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
REF + + E NG + +++ F K ++E ++L +++ S
Sbjct: 867 -REFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVIS 916
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 154/382 (40%), Gaps = 12/382 (3%)
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
LV+ +M G+ +D +A K+G + +L K D P +T +Y +
Sbjct: 262 LVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLI-----EKEDFVP-NTILYNKMI 315
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
L ++ EA+ F M+ + + Y L+C + ++ + + +G
Sbjct: 316 SGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCY 375
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK----ISDCISCAIVNG--FSKRRGY 380
+ LV Y + +++ M+ + K + + + +I +G +
Sbjct: 376 PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTF 435
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A K Y +++S G + +V S C + KA KV EM GF YS +
Sbjct: 436 ELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEV 495
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ R+ +A +L +MK G P+V+ Y L+D +A ++Q EM R
Sbjct: 496 IGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGC 555
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
P V+YTT+I AY +A++ + + + G + ++ + K IE+ +
Sbjct: 556 EPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQ 615
Query: 561 LLQDMKSEGTKLDERLYHSAMN 582
+ M+ + D +Y N
Sbjct: 616 IYARMRGDADIPDVDMYFKIKN 637
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 132/331 (39%), Gaps = 16/331 (4%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
AL+ +K+ G Y +L+ F ++ A+ + +E E G+ D + L
Sbjct: 225 ALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMD-----EFTL 279
Query: 338 MYIEEGL--VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ + L V K + + ++ + + +++G + + A+ ++ S C
Sbjct: 280 GFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSC 339
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
IP TY ++ + +++ M +G ++S+V Y K+ A
Sbjct: 340 IPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYK 399
Query: 456 LVAKMKAKGCEPNVWIYNSLM-------DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
L+ KM+ C+P +YN L+ ++ G EK + EM +KV+
Sbjct: 400 LLKKMEKCECKPGYVVYNILIGSICSGGELPGPV-TFELAEKAYNEMLSAGTVLNKVNVV 458
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+ +F+ K +E NG V D + ++G S++E L ++MK
Sbjct: 459 SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT 518
Query: 569 GTKLDERLYHSAMNALRDAGLQMQAQ-WLQQ 598
G D Y ++ AG+ QA WL +
Sbjct: 519 GVVPDVYTYTILIDCFSKAGIIKQAHNWLDE 549
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
YC+++E Y + E + +L L + K S P +YK+L D+ K+GR AL+ +
Sbjct: 858 YCKVIEGYKR----EFILSLGLLEEVEKNGSAPI-ILLYKVLIDNFVKAGRLEVALELHK 912
Query: 284 DM--KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
++ + ++Y SLI SF+ +++ A ELF + G++ D + L++ I
Sbjct: 913 EVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIR 972
Query: 342 EGLVEKTLDVVESM 355
E+ L + +S+
Sbjct: 973 VRRWEEALQLSDSL 986
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 156/326 (47%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L D G SG+ E + F +M EKGI D +Y +I I K A LF E
Sbjct: 4 YTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELT 63
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
EKG++ + L+ + G +E +V M+ L ++ I +++G+ KR
Sbjct: 64 EKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLID 123
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A KV + +G T +I + ++ +A++ + M +KG VV+Y++++
Sbjct: 124 EAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLI 183
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+Y K G +A L +MK G EPN YN L+D H + +++ +L EM + +
Sbjct: 184 DIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIF 243
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD +YT+++ + D V+ +NE R G ++ ++ SK + EE KL
Sbjct: 244 PDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKL 303
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDA 587
+M G D+R+Y S +++L A
Sbjct: 304 YDEMTEAGLTPDDRVYTSLVSSLHKA 329
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 153/313 (48%), Gaps = 7/313 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y +++ + G ++V +F E + + + H+Y ++ + K G A F
Sbjct: 4 YTLLIDWHGSSGKIDEVERMFEEMCEKGIKA---DIHVYTVVINWNCKIGNTKRAFALFD 60
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
++ EKG++ + Y +LI E++ AE L E + +G+ + + L+ Y + G
Sbjct: 61 ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
L+++ V M+ + I +G K A + +I +G +P V+Y
Sbjct: 121 LIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYT 180
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
++I+ YC+ + +A+K+F EM++ G + V Y+ ++ + K GR+++A L +M+AK
Sbjct: 181 TLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAK 240
Query: 464 GCEPNVWIYNSLMDMHGRA--KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
G P+++ Y SL +HG L +L+ E+ ++ + + V+YT +IS ++ +
Sbjct: 241 GIFPDIYTYTSL--LHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSE 298
Query: 522 MCVKFYNEFRMNG 534
K Y+E G
Sbjct: 299 EAFKLYDEMTEAG 311
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TY +I+ + + E++F EM +KG + Y+ ++ K G + A L ++
Sbjct: 3 TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
KG NV Y +L+D +A + E L EM+ R + +++ Y T+I Y +
Sbjct: 63 TEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLI 122
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
D K G D + KL+Q EE + L M +G
Sbjct: 123 DEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKG 171
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/164 (19%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V Y+ ++ +G +G+I + + +M KG + ++ +Y +++ + + N ++ L+
Sbjct: 1 VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
E+ + + + +Y +I +A E + NE + G +++ I ++ + K
Sbjct: 61 ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ-WL 596
I+E K+ M+ +G + D ++ + LR +A+ WL
Sbjct: 121 LIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWL 164
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 181/377 (48%), Gaps = 8/377 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGD---SEKVAALFLECKSRKLDSTPFSTHMYKI 264
V M+ AG ++ Y ++ A+ + G+ +E+V +L E + K + F++ M
Sbjct: 174 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS-MVNG 232
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
LC K+GR A K F +M +G+ D Y +L+ + + + + +F E ++G
Sbjct: 233 LC----KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
++ D L+ + G +E+ + +V M+ L++++ A+++GF K+ A+
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
E++ G P V Y ++IN YC++ A ++ EM+ K VV YS++++ Y
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K G + A L KM KG P+ Y+SL+ K L +L++ M + V PD+
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+YTT+I + + + + ++E G + D +++ SK ++ +E +LL
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528
Query: 565 MKSEGTKLDERLYHSAM 581
+ E D Y + M
Sbjct: 529 LYHEDPVPDNIKYDALM 545
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 192/428 (44%), Gaps = 18/428 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +L+R L + + V + D + P+A T + LVA+ RA + A +
Sbjct: 150 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 209
Query: 175 LQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+ + +G L+ FNS + G K V+++M G+ D Y ++ Y
Sbjct: 210 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 269
Query: 233 KIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K+G + A+F E R L D F++ L + K+G +A+ M+E+G+
Sbjct: 270 KVGCLHESLAVFSEMTQRGLVPDVVTFTS-----LIHATCKAGNLEQAVALVAQMRERGL 324
Query: 291 LEDPSIYASLI---CSFASITEVKLAEELFKEAEEKGMLRDPEVCLK-LVLMYIEEGLVE 346
+ + +LI C + + LA E + K ++ VC L+ Y + G ++
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMR----KCGIQPSVVCYNALINGYCKLGRMD 380
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+++ M+ ++K I++G+ K +A ++ ++++ +G +P +TY+S+I
Sbjct: 381 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 440
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
C + A ++F M Q G Y++++ + K G + A+ L +M KG
Sbjct: 441 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 500
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+V Y+ L++ ++ ++ +L ++ PD + Y ++ ++A EF V
Sbjct: 501 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA-EFKSVVAL 559
Query: 527 YNEFRMNG 534
F M G
Sbjct: 560 LKGFCMKG 567
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 187/452 (41%), Gaps = 61/452 (13%)
Query: 115 PEKSTLKLLIRYLVQSKKWDS---IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
P T L+ ++ + D +VSL + N P+ T + +V +A + + A
Sbjct: 185 PNAVTYNTLVAAFCRAGELDGAERVVSLMREEG--NAKPNLVTFNSMVNGLCKAGRMEGA 242
Query: 172 NTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ + +G ++++N+ + GY K+ + ++ V+ +M G+V D + ++ A
Sbjct: 243 RKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHA 302
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K G+ E+ AL + + R L + + L D K G +AL +M++ GI
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNEVT---FTALIDGFCKKGFLDDALLAVEEMRKCGI 359
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
Y +LI + + + LA EL +E E K + D ++ Y + G ++
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419
Query: 351 VVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+ + M K + D I+ +++ G + + A +++E ++ G P + TY ++I+ +
Sbjct: 420 LNQKMLK-KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 478
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ KA + EM +KG VV YS ++ K+ R ++A L+ K+ + P+
Sbjct: 479 CKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 538
Query: 470 WIYNSLM--------------------------------------------------DMH 479
Y++LM H
Sbjct: 539 IKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 598
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
R N+R+ K+M R +P+ S +++
Sbjct: 599 CRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 630
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 111/233 (47%), Gaps = 1/233 (0%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+V R AV V + GC P VTY +++ A+CR AE+V M+++G
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 217
Query: 430 FDKC-VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
K +V ++SMV K GR+ A + +M +G P+V YN+L+ + + L +
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 277
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
++ EM +R + PD V++T++I A +A + V + R G ++ ++
Sbjct: 278 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 337
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
F K +++ + +++M+ G + Y++ +N G A+ L + E
Sbjct: 338 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 172/413 (41%), Gaps = 27/413 (6%)
Query: 75 TAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
A P+ F+S ++G+ K + E A ++E + P+ + L+ +
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGR-MEGARKVFDEMVR-EGLAPDVVSYNTLLSGYCKVGCLH 275
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAM 193
+++ + ++PD T + L+ + +A + A L+ G + + F + +
Sbjct: 276 ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 335
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRK 251
G+ K +L E+M+ GI CY ++ Y K+G + L +E K K
Sbjct: 336 DGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK 395
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
D +ST + K G A + + M +KG+L D Y+SLI +
Sbjct: 396 PDVVTYST-----IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 450
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI- 370
A ELF+ + G+ D L+ + +EG VEK L + + M K + D ++ ++
Sbjct: 451 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR-KGVLPDVVTYSVL 509
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY---------------ASIINAYCRIALY 415
+NG SK A ++ +L + +P + Y +++ +C L
Sbjct: 510 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLM 569
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+A+KV+ M + + YS ++ + + G +R A+ +M G PN
Sbjct: 570 KEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 622
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 64/348 (18%), Positives = 133/348 (38%), Gaps = 21/348 (6%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VPD F S +H K ++ ++ R + T LI + D
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRER--GLRMNEVTFTALIDGFCKKGFLDDA 347
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGG 195
+ E+ + + P + L+ + + +A L+ ++ + ++ +++ + G
Sbjct: 348 LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISG 407
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
Y K+ S + +KM G++ D+ Y ++ + LF +
Sbjct: 408 YCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD 467
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
F+ Y L D K G +AL +M KG+L D Y+ LI + K A
Sbjct: 468 EFT---YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 524
Query: 316 L-FKEAEEKGMLRDPE-----VC---------LKLVLMYIEEGLVEKTLDVVESMKNAKL 360
L FK E + + + +C + L+ + +GL+++ V +SM +
Sbjct: 525 LLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNW 584
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
K+ + +++G + A+ ++Q++ G P + S++
Sbjct: 585 KLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRG 632
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 210/472 (44%), Gaps = 47/472 (9%)
Query: 154 TCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTIL--VYE 210
T + L+ +C R + A L+ DG + + ++S + + + S IL +Y
Sbjct: 187 TYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYT 246
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
++++ I +D I+ + K GD + +S L+ P ST + IL +LG
Sbjct: 247 EIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKP-STLVAVIL--ALG 303
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
SGR EA F +++E G Y +L+ + +K AE + E E+ G+ D +
Sbjct: 304 NSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQ 363
Query: 331 -----------------------------------VCLKLVLMYIEEGLVEKTLDVVESM 355
V +++ Y ++G +K+ V++ M
Sbjct: 364 TYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDM 423
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
K+ ++ +++ F K A+ +E+++S+G P VT+ ++IN +C+ +
Sbjct: 424 KSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRH 483
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+ AE++F EMQQ+G+ C+ Y+ M+ G+ R ++KM+++G PN Y +L
Sbjct: 484 NMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTL 543
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM--N 533
+D++G++ + + ++ P Y +I+AY + ++ V N FR+
Sbjct: 544 VDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAV---NAFRLMTT 600
Query: 534 GGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G+ +A ++ F + + E +LQ MK + D Y + M AL
Sbjct: 601 EGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKAL 652
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 182/406 (44%), Gaps = 7/406 (1%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG--DSEKVAALF 244
L +N+ +G + + + KM+ G D Y I++ + DS + L+
Sbjct: 186 LTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLY 245
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E ++ K++ H+ + K+G A++F + G+ PS ++I +
Sbjct: 246 TEIETDKIE---IDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILAL 302
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ AE LF+E E G L+ Y++ G ++ VV M+ A +K +
Sbjct: 303 GNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDE 362
Query: 365 CISCAIVNGFSKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+++ ++ G W + + V +++ + P Y+ I+ +Y + K+ +V
Sbjct: 363 QTYSLLIDAYA-HAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLK 421
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+M+ G Y+ M+ +GK + AM +M ++G P+ +N+L++ H ++
Sbjct: 422 DMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSG 481
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
E+L+ EM++R +P +Y +I++ + ++ F ++ + G + +
Sbjct: 482 RHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYT 541
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+V V+ K + + ++ L+ +KS G K +Y++ +NA GL
Sbjct: 542 TLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGL 587
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 162/342 (47%), Gaps = 15/342 (4%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y IL ++LG+S + +EA + ++ +L P Y +LI + A +V+ A L +
Sbjct: 157 LYSILINALGRSEKLYEAFL----LSQRQVL-TPLTYNALIGACARNGDVEKALNLMSKM 211
Query: 321 EEKGMLRDPEVCLKLVLMY------IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
G D V ++ Y I+ +++K +E+ K++I + I+ GF
Sbjct: 212 RRDGYQPD-FVNYSSIIQYLTRSNKIDSPILQKLYTEIET---DKIEIDGHLMNDIILGF 267
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
SK A++ S G P T ++I A +AE +F E+++ G +
Sbjct: 268 SKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRT 327
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
AY++++ Y KTG ++DA ++V++M+ G +P+ Y+ L+D + A + KE
Sbjct: 328 RAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKE 387
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
ME V P+ Y+ ++++Y E+ + + + NG DR +M+ F K +
Sbjct: 388 MEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNC 447
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ + + M SEG + D +++ +N +G A+ L
Sbjct: 448 LDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEEL 489
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 161/370 (43%), Gaps = 9/370 (2%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
A+N+ + GY K V +M+ AG+ D Y +++AY G E + E
Sbjct: 329 AYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEM 388
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
++ ++ ++++Y + S G ++ + +DMK G+ D Y +I +F
Sbjct: 389 EASNVEP---NSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKY 445
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+ A F+ +G+ D L+ + + G ++ M+ + S CI+
Sbjct: 446 NCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQ--QRGYSPCIT 503
Query: 368 C--AIVNGFSKRRGYWAAVKVY-EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
++N +++ W V ++ ++ SQG +P +TY ++++ Y + +S A +
Sbjct: 504 TYNIMINSMGEQQ-RWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEV 562
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
++ GF Y++++ Y + G A+ M +G P++ NSL++ G +
Sbjct: 563 LKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRR 622
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+ + + M+ + PD V+YTT++ A R +F Y E +G DR +
Sbjct: 623 DAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVTSGCTPDRKARAM 682
Query: 545 MVGVFSKLSQ 554
+ + Q
Sbjct: 683 LRSALRYMKQ 692
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 156/356 (43%), Gaps = 12/356 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + +++ L G +K ++ + +E +K +P++ T LLI + +W+S
Sbjct: 325 PRTRAYNALLKGYVKTGSLKDAEF-VVSEMEKA-GVKPDEQTYSLLIDAYAHAGRWESAR 382
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM---- 193
+ ++ + NV P+++ SR++AS +++ + +L+ ++G F + M
Sbjct: 383 IVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTF 442
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G YN L +T +E+M S GI D+ + ++ + K G LF E + R
Sbjct: 443 GKYNCLDHAMAT---FERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGY- 498
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+P T Y I+ +S+G+ R + F M+ +G+L + Y +L+ + A
Sbjct: 499 -SPCIT-TYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDA 556
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
E + + G + L+ Y + GL E ++ M L S +++N
Sbjct: 557 IECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINA 616
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
F + R A V + + P VTY +++ A R+ + K V+ EM G
Sbjct: 617 FGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVTSG 672
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 5/223 (2%)
Query: 385 KVYEQ-LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
K+YE L+SQ + +TY ++I A R KA + +M++ G+ V YSS++
Sbjct: 170 KLYEAFLLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQY 229
Query: 444 YGKTGRIRDAMW--LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
++ +I + L +++ E + + N ++ +A + + + + +
Sbjct: 230 LTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLN 289
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI-DRAIAGIMVGVFSKLSQIEELVK 560
P + VI A + + E R NG RA ++ G + K +++
Sbjct: 290 PKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKG-YVKTGSLKDAEF 348
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
++ +M+ G K DE+ Y ++A AG A+ + + E +
Sbjct: 349 VVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEAS 391
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 119/534 (22%), Positives = 227/534 (42%), Gaps = 71/534 (13%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
+I L ++ + + V L E +P A+ + ++ A KF+ A +LL+ G
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370
Query: 183 EI-ALLAFNSAMGGYNKLHMYYSTILVYEKMK--------SAGIVLDSGCYCQIMEAYYK 233
I +++++N + + + +E+MK + I++D C +E
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALV 430
Query: 234 IGDSEKVAALFLE-----------CKSRKLDST-------------PFSTHMYKILCDSL 269
+ D+ K A LF CK+++LD P + Y L + L
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAV-TYCSLIEGL 489
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLI---------------------------- 301
G+ GR EA K + M + + + +Y SLI
Sbjct: 490 GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDL 549
Query: 302 --------CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
C F + E++ LF+E + G + D L+ ++ G + ++
Sbjct: 550 LLLNTYMDCVFKA-GEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+MK + +++GF K A ++ E++ ++G P VTY S+I+ +I
Sbjct: 609 TMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKID 668
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+A +F E + KG + VV YSS++ +GK GRI +A ++ ++ KG PNV+ +N
Sbjct: 669 RLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 728
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
L+D +A+ + + ++ M+ K TP+ ++Y+ +I + R+F+ F+ E +
Sbjct: 729 CLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQ 788
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
G + M+ +K I E L + K +G D +Y++ + L +A
Sbjct: 789 GFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNA 842
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 115/542 (21%), Positives = 220/542 (40%), Gaps = 52/542 (9%)
Query: 89 GMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNV 148
G+L+ + A +Y+ A++L + + L+ + +++K++ + + E+ I
Sbjct: 102 GVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGF 161
Query: 149 LPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYST--- 205
P +TC +V S +++RK + A T +Q + L F A Y L ST
Sbjct: 162 GPSNNTCIEIVLSFIKSRKLREAFTFIQT------MRKLKFRPAFSAYTNLIGALSTSRD 215
Query: 206 ----ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
+ ++++M+ G ++ + ++ + + G + +L E KS L+ +
Sbjct: 216 SDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEP---DVVL 272
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y + D GK+G+ A K F +MK G++ D Y S+I + A ELF+ +
Sbjct: 273 YNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMD 332
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ + +++ Y G E ++E + S I++ ++
Sbjct: 333 QNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVD 392
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+K +E++ + IP TY +I+ C+ A V M+ G V+ + MV
Sbjct: 393 EALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMV 451
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
K R+ DA + + K C P+ Y SL++ GR + + KL+++M
Sbjct: 452 DRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQI 511
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ V YT++I + + + K YNE G D + + K +IE+ L
Sbjct: 512 PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRAL 571
Query: 562 LQD-----------------------------------MKSEGTKLDERLYHSAMNALRD 586
Q+ MK +G LD R Y++ ++
Sbjct: 572 FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCK 631
Query: 587 AG 588
+G
Sbjct: 632 SG 633
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 192/457 (42%), Gaps = 75/457 (16%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC-KSRKLDSTPFSTHMYKILC 266
+EKM++ GI S Y ++ AY D E+ L C + K + S Y IL
Sbjct: 333 TFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEA----LSCVRKMKEEGIEMSLVTYSILV 388
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG-- 324
K+G A A +F++ KEK + IY ++I ++ + AE L +E EE+G
Sbjct: 389 SGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGID 448
Query: 325 --------------MLRDPEVCLK-------------------LVLMYIEEGLVEKTLDV 351
M+ D + CL L+ +Y + G V K L+V
Sbjct: 449 APIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEV 508
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+ M++A +K + ++NGF K + + A ++E LI G P V Y +II A+C
Sbjct: 509 SKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCG 568
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ +A EMQ++ + ++ + + G ++ A+ + M+ GC P V
Sbjct: 569 MGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHT 628
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
YN+L+ + + + E++ EM V+P++ +YTT++ Y + ++ + R
Sbjct: 629 YNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLR 688
Query: 532 MNG------------------GVIDRAIA-----------------GIMVGVFSKLSQIE 556
G G + A+A I++ +++ I
Sbjct: 689 DEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIW 748
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
E L+Q MK EG + D Y S +NA AG +A
Sbjct: 749 EAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRA 785
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 192/406 (47%), Gaps = 23/406 (5%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGI---VLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+++ M GY + +LV+E+ K G+ V+ GC ++ Y K+G K +
Sbjct: 454 YHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGC---LINLYAKLGKVSKALEV-- 508
Query: 246 ECKSRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
S++++ +M Y +L + K A F D+ + GI D +Y ++I +
Sbjct: 509 ---SKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITA 565
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
F + ++ A KE +++ + ++ + +G ++K LDV + M+ +S
Sbjct: 566 FCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMR-----MS 620
Query: 364 DCISC-----AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
CI A++ G ++R A ++ +++ G P + TY +I++ Y + KA
Sbjct: 621 GCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKA 680
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
F +++ +G V Y +++ K+GR++ A+ + +M A+ N +IYN L+D
Sbjct: 681 FTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDG 740
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
R ++ + L ++M+R V PD +YT+ I+A ++A + K E + G +
Sbjct: 741 WARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPN 800
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ +++ S E+ + ++MK G K D +YH M +L
Sbjct: 801 VKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSL 846
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/292 (19%), Positives = 131/292 (44%)
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y ++ + ++ A E F++ +G+ V L+ Y +E+ L V MK
Sbjct: 314 YGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+++S +V+GF+K +A +++ + + Y +II AYC+
Sbjct: 374 EEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMD 433
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
KAE + EM+++G D + Y +M+ Y G + + + K G P+V Y L+
Sbjct: 434 KAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLI 493
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+++ + + + ++ KEME + + +Y+ +I+ + + +++ + + +G
Sbjct: 494 NLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 553
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
D + ++ F + +++ V +++M+ + K R + ++ G
Sbjct: 554 PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKG 605
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 156/383 (40%), Gaps = 55/383 (14%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI-------------------- 301
Y ++ + + G A + F M+ +GI +Y +LI
Sbjct: 314 YGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373
Query: 302 ---------------CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
FA + A+ F+EA+EK + + ++ Y + ++
Sbjct: 374 EEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMD 433
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
K +V M+ + I +++G++ + V+E+ G P +TY +I
Sbjct: 434 KAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLI 493
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
N Y ++ SKA +V EM+ G + YS ++ + K +A + + G +
Sbjct: 494 NLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 553
Query: 467 PNVWIYNSLMDMH-GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
P+V +YN+++ G K R V + KEM++++ P ++ +I + R E +
Sbjct: 554 PDVVLYNNIITAFCGMGKMDRAVCTV-KEMQKQRHKPTTRTFMPIIHGFARKGEMKKALD 612
Query: 526 FYNEFRMNGGVID-RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA- 583
++ RM+G + +++G+ K ++E+ ++L +M G +E Y + M+
Sbjct: 613 VFDMMRMSGCIPTVHTYNALILGLVEK-RKMEKAEQILDEMTLAGVSPNEHTYTTIMHGY 671
Query: 584 ---------------LRDAGLQM 591
LRD GLQ+
Sbjct: 672 ASLGDTGKAFTYFTKLRDEGLQL 694
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/365 (18%), Positives = 154/365 (42%), Gaps = 4/365 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
P T LI + K + +S++ + + + T S L+ ++ + + A
Sbjct: 482 LNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAF 541
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + I DG + ++ +N+ + + + + ++M+ + + I+ +
Sbjct: 542 AIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGF 601
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ G+ +K +F ++ + H Y L L + + +A + +M G+
Sbjct: 602 ARKGEMKKALDVF---DMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVS 658
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y +++ +AS+ + A F + ++G+ D L+ + G ++ L V
Sbjct: 659 PNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAV 718
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+ M + + I +++G+++R W A + +Q+ +G P TY S INA +
Sbjct: 719 TKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSK 778
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+A K EM+ G V Y++++ + + A+ +MK G +P+ +
Sbjct: 779 AGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAV 838
Query: 472 YNSLM 476
Y+ LM
Sbjct: 839 YHCLM 843
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 198/449 (44%), Gaps = 16/449 (3%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYS 204
+ V PD + ++ V+A K K+ TL + D + FN + K H
Sbjct: 158 FAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRP 217
Query: 205 TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE---KVAALFLECKSRKLDSTPFSTHM 261
IL+ E M + G+ D + +M+ + + D E ++ L +E ++
Sbjct: 218 AILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVE------SGCELTSVS 271
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+L + L K GR EAL+F + E+G D + +L+ +K E+
Sbjct: 272 VNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFML 329
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
EKG D L+ + G +++ ++++ M + + + ++ K
Sbjct: 330 EKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVE 389
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
AA ++ L S+G +P T+ S+I C + A ++F EM++KG D YS ++
Sbjct: 390 AATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILI 449
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR--QVEKLWKEMERRK 499
R+++A+ L+ +M+ GC NV +YN+L+D G KN R E ++ +ME
Sbjct: 450 ESLCSERRLKEALMLLKEMELSGCARNVVVYNTLID--GLCKNNRVGDAEDIFDQMEMLG 507
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
V+ V+Y T+I+ +++ + + ++ M G D+ M+ F + I+
Sbjct: 508 VSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAA 567
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAG 588
++Q+M G + D Y + + L AG
Sbjct: 568 DIVQNMTLNGCEPDIVTYGTLIGGLCKAG 596
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 114/526 (21%), Positives = 202/526 (38%), Gaps = 75/526 (14%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRL---------VASCVRA 165
P+ ST +LIR L ++ + + + ED Y + PD T + L V +R
Sbjct: 197 PDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRI 256
Query: 166 RKFKI----------ANTLLQVFITDGEI--AL-------------LAFNSAMGGYNKLH 200
++ + N L+ +G I AL + FN+ + G +
Sbjct: 257 KELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFNALVNGLCRTG 316
Query: 201 MYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH 260
+ + + M G LD Y ++ K+G+ ++ + SR D P +T
Sbjct: 317 HIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSR--DCEP-NTV 373
Query: 261 MYKILCDSLGK------------------------------------SGRAFEALKFFRD 284
Y L +L K S R A++ F +
Sbjct: 374 TYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREI-AMELFEE 432
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
MKEKG D Y+ LI S S +K A L KE E G R+ V L+ +
Sbjct: 433 MKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNR 492
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V D+ + M+ + S ++NG K + A ++ +Q+I +G P + TY +
Sbjct: 493 VGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTT 552
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
++ +C+ +A + M G + +V Y +++ K GR+ A L+ ++ KG
Sbjct: 553 MLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKG 612
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY-NRAREFDMC 523
YN ++ + K ++ +L++EM + PD ++Y V N
Sbjct: 613 MVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEA 672
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
V F E G + + G + LS + L++L+ + +G
Sbjct: 673 VDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKG 718
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 7/244 (2%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSED 142
+++ + G+ K+ + + A D +++ + L R T LI L +SK+ + L +
Sbjct: 480 YNTLIDGLCKNNRVGD-AEDIFDQMEMLGVSR-SSVTYNTLINGLCKSKRVEEAAQLMDQ 537
Query: 143 FKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHM 201
+ + PD T + ++ + K A ++Q +G E ++ + + +GG K
Sbjct: 538 MIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGR 597
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
+ ++ G+VL Y +++A K +++ LF E + P
Sbjct: 598 VDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEK---GDPPDVIT 654
Query: 262 YKILCDSLGKSGRAF-EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
YKI+ L G EA+ F +M EKGIL + + L S++ +L
Sbjct: 655 YKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMV 714
Query: 321 EEKG 324
EKG
Sbjct: 715 MEKG 718
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 197/458 (43%), Gaps = 6/458 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ +++ + G+ K Q ++A + + +P T +I L +++ D
Sbjct: 258 PNNVTYNTIIDGLCK-AQEVDMAEGVFQKMVD-KGVKPSNVTYNTIIDGLCKAQAVDRAE 315
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ + V PD T + ++ +A+ A + Q I G + L + + G
Sbjct: 316 GVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGL 375
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K V+++M G+ ++G Y ++ Y G E+V E + L+
Sbjct: 376 CKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDV 435
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
F+ Y +L D L K+G+ EA F M KGI +IY ++ + + +L
Sbjct: 436 FT---YGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDL 492
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
G+ + + ++ Y + ++++ + + MK L + +++ K
Sbjct: 493 LNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCK 552
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
AV + Q+I++G P V + S++ C + + K E++F+EM +G +V
Sbjct: 553 LGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVF 612
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
+++++ K GR+ +A L+ M G +P+V YN+L+D H A + + KL M
Sbjct: 613 FNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMV 672
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+ P+ VSY T++ Y +A D + E G
Sbjct: 673 SAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKG 710
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 161/371 (43%), Gaps = 12/371 (3%)
Query: 220 DSGC------YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
DS C Y ++ ++ G +K +LFLE + +P Y + D L K+
Sbjct: 186 DSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLE-----MGVSP-DVVTYNTIIDGLCKAQ 239
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
A F+ M EKG+ + Y ++I EV +AE +F++ +KG+
Sbjct: 240 EVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYN 299
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ 393
++ + V++ V + M + +K I++G K + A V++Q+I +
Sbjct: 300 TIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDK 359
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G P +TY II+ C+ +AE VF +M KG Y+ ++ Y TG+ +
Sbjct: 360 GVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEV 419
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ + +M A EP+V+ Y L+D + + L+ M R+ + P Y ++
Sbjct: 420 VQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHG 479
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
Y + N NG + I ++ ++K + I+E++ + MK +G +
Sbjct: 480 YGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPN 539
Query: 574 ERLYHSAMNAL 584
Y + ++AL
Sbjct: 540 VVTYGTLIDAL 550
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 189/416 (45%), Gaps = 13/416 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ +N+ + G K V+++M G+ ++ Y I++ K + + +F
Sbjct: 225 VVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQ 284
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ + + + + Y + D L K+ A F+ M ++G+ D Y ++I
Sbjct: 285 KMVDKGVKPSNVT---YNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLC 341
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL-----VEKTLDVVESMKNAKL 360
+ AE +F++ +KG+ D L I +GL V++ V + M + +
Sbjct: 342 KAQAIDKAEGVFQQMIDKGVKPD-----NLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGV 396
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
K ++ +++G+ + V+ +++ + P TY +++ C+ ++A
Sbjct: 397 KPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARS 456
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+F M +KG V Y M+ YGK G + + L+ M A G PN I+N+++ +
Sbjct: 457 LFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYA 516
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+ + +V ++ +M+++ ++P+ V+Y T+I A + D V +N+ G +
Sbjct: 517 KRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNV 576
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ +V + + E++ +L +M ++G + D +++ + L G M+A+ L
Sbjct: 577 VFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRL 632
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/457 (20%), Positives = 188/457 (41%), Gaps = 39/457 (8%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P T LI + + +W+ +V ++ +++ PD T L+ + K A +
Sbjct: 397 KPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARS 456
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L I G + ++ + + GY K + M + GI + + ++ AY
Sbjct: 457 LFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYA 516
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K ++V +F++ K + L + Y L D+L K GR +A+ F M +G+
Sbjct: 517 KRAMIDEVMHIFIKMKQQGLSPNVVT---YGTLIDALCKLGRVDDAVLQFNQMINEGVTP 573
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ ++ SL+ ++ + + EELF E +G+ D ++ +EG V + ++
Sbjct: 574 NNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLI 633
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+SM + G P ++Y ++I+ +C
Sbjct: 634 DSM-----------------------------------VCMGLKPDVISYNTLIDGHCFA 658
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+ +A K+ M G +V+Y++++ Y K GRI +A L +M KG P V Y
Sbjct: 659 SRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETY 718
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N++++ R+ + +L+ M + + +Y+ ++ + + FD K +
Sbjct: 719 NTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCS 778
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+D IM+ K + E+ + L + + G
Sbjct: 779 MDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANG 815
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 166/379 (43%), Gaps = 17/379 (4%)
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
GC+C+I ++G AA L K+ + K LCD+ + G A L
Sbjct: 92 GCFCRI--GRLELG----FAAFGLILKTGWRVDDIVVNQLLKGLCDT-KRVGEAMHVL-- 142
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE-AEEKGMLRDPEVCLKLVLM-- 338
R M E G Y +L+ + A EL + + P+V +++
Sbjct: 143 LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVING 202
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
+ EG V+K + M + D ++ I++G K + A V++Q++ +G P
Sbjct: 203 FFNEGQVDKAYSLFLEMGVS----PDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
VTY +II+ C+ AE VF +M KG V Y++++ K + A +
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVF 318
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+M +G +P+ YN+++D +A+ + + E ++++M + V PD ++YT +I +A
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKA 378
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ D + + G + ++ + Q EE+V+ +++M + + D Y
Sbjct: 379 QSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTY 438
Query: 578 HSAMNALRDAGLQMQAQWL 596
++ L G +A+ L
Sbjct: 439 GLLLDYLCKNGKCNEARSL 457
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 98/529 (18%), Positives = 192/529 (36%), Gaps = 82/529 (15%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ ++ +HG L Q +E+ + + P+ T LL+ YL ++ K +
Sbjct: 398 PNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAH--DLEPDVFTYGLLLDYLCKNGKCNEAR 455
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
SL + + P ++ + + LL + + +G FN+ + Y
Sbjct: 456 SLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAY 515
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG---DS---------------- 237
K M + ++ KMK G+ + Y +++A K+G D+
Sbjct: 516 AKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNN 575
Query: 238 ----------------EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
EKV LFLE ++ + P +LC+ L K GR EA +
Sbjct: 576 VVFNSLVYGLCTVDKWEKVEELFLEMLNQGI--RPDIVFFNTVLCN-LCKEGRVMEARRL 632
Query: 282 FRDMKEKGILED---------------------------------PSI--YASLICSFAS 306
M G+ D P+I Y +L+ +
Sbjct: 633 IDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCK 692
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
+ A LF+E KG+ E ++ G + ++ +M ++ S C
Sbjct: 693 AGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICT 752
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
I++GF K + A K+++ L S +T+ +I+ + A +F +
Sbjct: 753 YSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIP 812
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
G VV Y + + G + + L + M+ G PN + N+L+ +
Sbjct: 813 ANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIP 872
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNR------AREFDMCVKFYNE 529
+ +++ + + + + + +IS ++R A+ +F+NE
Sbjct: 873 RAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPEKCRFFNE 921
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 7/192 (3%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW- 455
P TY+ +I +CRI F + + G+ + + ++ T R+ +AM
Sbjct: 82 PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141
Query: 456 LVAKMKAKGCEPNVWIYNSLMDM---HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
L+ +M GC V YN+L+ RA+ R++ + + + +PD VSY VI+
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ + D K Y+ F G D ++ K +++ + Q M +G K
Sbjct: 202 GFFNEGQVD---KAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258
Query: 573 DERLYHSAMNAL 584
+ Y++ ++ L
Sbjct: 259 NNVTYNTIIDGL 270
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 195/419 (46%), Gaps = 8/419 (1%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITD 181
+I L + + D + + E+ K + PD +T S L+ C + K + ++ ++
Sbjct: 331 IIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSN 390
Query: 182 GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
E +L++++S G K + ++ ++ + +AG D Y +++ + GD +
Sbjct: 391 MEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAH 450
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
L E L P + ++ L K G AL+FF M E GIL PSI +
Sbjct: 451 KLMEEMVRNNLAPDPSN---FESLVHGFCKMGLWVNALEFFNMMLEGGIL--PSIATCNV 505
Query: 302 CSFASITEVKLAE--ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
A E ++ E L E + +G+ + ++ +E E+ L++ M
Sbjct: 506 IIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRN 565
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+ S + +++GF+K+ A+ +Y +++ G P V Y +IN C + +A
Sbjct: 566 VLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAY 625
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
+F +M + G ++Y+S++A + + G +R A L +M +G P V Y SL+D +
Sbjct: 626 NLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGY 685
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ + + L EM+R+ +TPD V+Y +I+A+ R D ++ NE + NG + D
Sbjct: 686 CKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPD 744
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 181/408 (44%), Gaps = 3/408 (0%)
Query: 181 DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
+G + + +N+ + G K + V E+MKS GI D Y ++ + K GD EK
Sbjct: 320 NGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKG 379
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
L E K ++ + S Y L L K + +L FRD+ G D + Y+ L
Sbjct: 380 LYLIEEMKYSNMEPSLVS---YSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSIL 436
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
I F ++ A +L +E + DP LV + + GL L+ M +
Sbjct: 437 IKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGI 496
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
S I++ + A+ + ++ +QG P TY ++IN C+ +A +
Sbjct: 497 LPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALE 556
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+F M ++ VV YS+++ + K + A+ L A+M G P++ Y L+++
Sbjct: 557 LFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILC 616
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+ + L+K+M +TPDK+SYT+VI+ + R + +NE G +
Sbjct: 617 HRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVV 676
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+V + K+++I+ L+ +MK +G D Y+ + A R G
Sbjct: 677 TYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRG 724
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 183/431 (42%), Gaps = 49/431 (11%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYK--IGDSE---KVAALFLECKSRKLDS---TPFST 259
++E+MKS G + Y +M Y K G+++ + A LE R +S +ST
Sbjct: 236 LFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYST 295
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
++Y L + G AL F R + L + Y ++I E+ A ++ +E
Sbjct: 296 YIY-----GLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEE 350
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR- 378
+ G+ D L+ + ++G VEK L ++E MK + ++ S ++ +G K+R
Sbjct: 351 MKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRL 410
Query: 379 --------------GYW--------------------AAVKVYEQLISQGCIPGQVTYAS 404
GY +A K+ E+++ P + S
Sbjct: 411 SDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFES 470
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+++ +C++ L+ A + F M + G + + ++ + + GR+ +A+ L+ +M+ +G
Sbjct: 471 LVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQG 530
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
PN++ YN++++ + + + +L+ M +R V P V Y+T+I + + +
Sbjct: 531 IFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKAL 590
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
Y G D I++ + S++ E L + M G D+ Y S +
Sbjct: 591 MLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGF 650
Query: 585 RDAGLQMQAQW 595
G M+ W
Sbjct: 651 CRIG-DMRKAW 660
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/395 (18%), Positives = 166/395 (42%), Gaps = 39/395 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + S HG+ K + +++ D + + ++ +++ +LI+ DS
Sbjct: 393 PSLVSYSSLFHGLCKK-RLSDISLDIFRDLGA-AGYKYDQTAYSILIKGFCMQGDLDSAH 450
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
L E+ N+ PD F S + G+
Sbjct: 451 KLMEEMVRNNLAPDPSN----------------------------------FESLVHGFC 476
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
K+ ++ + + + M GI+ I++A+ + G E+ L E +++ + F
Sbjct: 477 KMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLF 536
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ Y + + L K ++ AL+ F M ++ +L +Y++LI FA + + A L+
Sbjct: 537 T---YNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLY 593
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+ G+ D L+ + + + ++ + M + +++ GF +
Sbjct: 594 ARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRI 653
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A ++ +++ +G +P VTY S+++ YC++ A+ + EM++KG VV Y
Sbjct: 654 GDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTY 713
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+ ++A + + G + A+ ++ +MK G P+ Y
Sbjct: 714 NVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTY 748
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 83/184 (45%), Gaps = 6/184 (3%)
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
+ + +I + ++ A VF++ ++ G + + + ++ + R L +
Sbjct: 180 IVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEE 239
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAK------NLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
MK+ G PNV+ Y +M+ + + + RQ ++ +EMER +P V+Y+T I
Sbjct: 240 MKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYG 299
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
R + + F G+++ ++ K +++E +K+L++MKS G D
Sbjct: 300 LCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPD 359
Query: 574 ERLY 577
Y
Sbjct: 360 VYTY 363
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 196/426 (46%), Gaps = 5/426 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTIL- 207
PDA + LV++ RA +F+ A + + + +G + A++ +N + Y+K+ + + ++
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA 235
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ + MK+ GI LD Y ++ + ++ A +F E ++ + + + L D
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVT---FNSLLD 292
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA+ ++M+ G Y SLI S+ +K A EL +E E KG+
Sbjct: 293 VYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQP 352
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ G ++ + + M K + C A++ R + + V+
Sbjct: 353 DVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVF 412
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ L S G +P VT+ +++ + + L S+ VF EM++ G+ Y S+++ Y +
Sbjct: 413 DDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRC 472
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G +M + +M G P++ YN+++ R Q EKL+ EME PD++SY
Sbjct: 473 GLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSY 532
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
++++ AY A++ D + + +V V SK++ + E K ++
Sbjct: 533 SSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGR 592
Query: 568 EGTKLD 573
LD
Sbjct: 593 RRCSLD 598
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/518 (21%), Positives = 219/518 (42%), Gaps = 70/518 (13%)
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNS 191
W +V+L + K + D +T + L++ C R +K A + G E + FNS
Sbjct: 230 WKDVVALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNS 289
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL--FLECKS 249
+ Y K M+ I V ++M+ G Y ++ +Y K G ++ A L +E K
Sbjct: 290 LLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKG 349
Query: 250 RKLDSTPFSTHM------------------------------YKILCDSLGKSGRAFEAL 279
+ D ++T + Y L G G+ E +
Sbjct: 350 IQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMM 409
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
F D++ G + D + +L+ F +FKE ++ G + + + + L+ Y
Sbjct: 410 AVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSY 469
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPG 398
GL ++++++ + M A + A+++ + R G W A K++ ++ + C P
Sbjct: 470 SRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALA-RGGRWEQAEKLFAEMENLDCRPD 528
Query: 399 QVTYASIINAYC-----------------------------------RIALYSKAEKVFI 423
+++Y+S+++AY ++ S+ EK F+
Sbjct: 529 ELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFL 588
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+ ++ + ++MV++YGK ++ +++ MK + YNSLM M+ R
Sbjct: 589 ELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLG 648
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ + E + E++ PD+ SY T+I AY R + + ++E + +G + D
Sbjct: 649 DCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYN 708
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
I V + S EE + L++ M + G K +ER Y+S +
Sbjct: 709 IFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSIL 746
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 125/260 (48%), Gaps = 36/260 (13%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA--------------- 413
A+V+ FS+ + AV V+ ++++ G P VTY +++ Y +IA
Sbjct: 183 ALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALVDSMKN 242
Query: 414 ---------------------LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
LY +A KVF EM+ GF+ V ++S++ +YGK +
Sbjct: 243 DGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDE 302
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A+ ++ +M+ GC P+V YNSL+ + + L++ +L +EME + + PD ++YTT+IS
Sbjct: 303 AIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLIS 362
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+RA + D + Y+E NG + ++ + + E++ + D++S G
Sbjct: 363 GLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVP 422
Query: 573 DERLYHSAMNALRDAGLQMQ 592
D +++ + GL +
Sbjct: 423 DVVTWNTLLAVFGQNGLDSE 442
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 146/307 (47%), Gaps = 19/307 (6%)
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
D S Y +L+ +F+ + + A +F+ G+ P + V++++ + DVV
Sbjct: 177 DASAYTALVSAFSRASRFRDAVAVFRRMVANGI--QPAIVTYNVVLHVYSKIAVPWKDVV 234
Query: 353 ---ESMKNAKLKI-----SDCISCAIVNGFSKRRG--YWAAVKVYEQLISQGCIPGQVTY 402
+SMKN + + + ISC RRG Y A KV++++ + G P +VT+
Sbjct: 235 ALVDSMKNDGIPLDRYTYNTLISCC-------RRGALYKEAAKVFDEMRAAGFEPDKVTF 287
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
S+++ Y + ++ +A V EM+ G VV Y+S+++ Y K G +++A L +M+
Sbjct: 288 NSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEV 347
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
KG +P+V Y +L+ RA + + EM R P+ +Y +I + +F
Sbjct: 348 KGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPE 407
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ +++ R G V D ++ VF + E+ + ++MK G + Y S ++
Sbjct: 408 MMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLIS 467
Query: 583 ALRDAGL 589
+ GL
Sbjct: 468 SYSRCGL 474
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 162/362 (44%), Gaps = 36/362 (9%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI-TEVKLAEELFKEA 320
Y L + ++ R +A+ FR M GI Y ++ ++ I K L
Sbjct: 181 YTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALVDSM 240
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
+ G+ D L+ L ++ V + M+ A + ++++ + K R +
Sbjct: 241 KNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMH 300
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A+ V +++ GC P VTY S+I++Y + L +A ++ EM+ KG V+ Y+++
Sbjct: 301 DEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTL 360
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG-RAK---------NLR---- 486
++ + G+I A+ +M GC+PN+ YN+L+ +HG R K +LR
Sbjct: 361 ISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGF 420
Query: 487 ---------------------QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
+V ++KEM++ P++ +Y ++IS+Y+R FD ++
Sbjct: 421 VPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSME 480
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
Y G D + ++ ++ + E+ KL +M++ + DE Y S ++A
Sbjct: 481 IYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYA 540
Query: 586 DA 587
+A
Sbjct: 541 NA 542
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 185/440 (42%), Gaps = 43/440 (9%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T LI V+ L E+ ++ + PD T + L++ RA K A
Sbjct: 317 PSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGT 376
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ +G + L +N+ + + + + V++ ++SAG V D + ++ + +
Sbjct: 377 YDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQ 436
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G +V+ +F E K K P Y L S + G ++++ ++ M E GI D
Sbjct: 437 NGLDSEVSGVFKEMK--KSGYVP-ERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPD 493
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL---------------- 337
S Y +++ + A + AE+LF E E R E+ +L
Sbjct: 494 ISTYNAVLSALARGGRWEQAEKLFAEMENLD-CRPDELSYSSLLHAYANAKKLDKMKALS 552
Query: 338 --MYIEE-----GLVEKTLDVVESMKNA---------KLKISDC-ISCAIVNGFSKRRGY 380
+Y E+ GLV KTL +V S N +L C + ++N G
Sbjct: 553 EDIYAEKIESHHGLV-KTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGK 611
Query: 381 WAAVKVYEQLIS----QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
VK E+++S TY S+++ Y R+ K E + E++ G +
Sbjct: 612 NRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYS 671
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++M+ YG+ G++++A L ++MK+ G P++ YN + + + L + M
Sbjct: 672 YNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMV 731
Query: 497 RRKVTPDKVSYTTVISAYNR 516
R P++ +Y +++ Y R
Sbjct: 732 TRGCKPNERTYNSILQEYCR 751
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 165/388 (42%), Gaps = 39/388 (10%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P T LI+ K+ ++++ +D + +PD T NT
Sbjct: 386 KPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTW----------------NT 429
Query: 174 LLQVFITDG---EIALL--------------AFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
LL VF +G E++ + + S + Y++ ++ ++ +Y++M AG
Sbjct: 430 LLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAG 489
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
I D Y ++ A + G E+ LF E ++ LD P Y L + + +
Sbjct: 490 IYPDISTYNAVLSALARGGRWEQAEKLFAEMEN--LDCRPDELS-YSSLLHAYANAKKLD 546
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+ D+ + I + +L+ + + + E+ F E + D V +V
Sbjct: 547 KMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMV 606
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+Y + +V+K +++ MK + + +S ++++ +S+ + ++ S G
Sbjct: 607 SVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGAR 666
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + +Y ++I AY R +A ++F EM+ G +V Y+ V Y +A+ L
Sbjct: 667 PDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDL 726
Query: 457 VAKMKAKGCEPNVWIYNSLMD---MHGR 481
V M +GC+PN YNS++ HG+
Sbjct: 727 VRYMVTRGCKPNERTYNSILQEYCRHGK 754
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 131/353 (37%), Gaps = 80/353 (22%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ L + + + ++ A + E + L + RP++ + L+ +KK D +
Sbjct: 492 PDISTYNAVLSALARGGRWEQ-AEKLFAEMENL-DCRPDELSYSSLLHAYANAKKLDKMK 549
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT---LLQVFITDGEIALLAFNSAMG 194
+LSED IY ++H V ++ ++ T L++ + + N+ +
Sbjct: 550 ALSED--IYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVS 607
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
Y K M + MK + I L + Y +M Y ++GD EK
Sbjct: 608 VYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEK--------------- 652
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
C+++ ++K G D Y ++I ++ ++K A
Sbjct: 653 -----------CENI------------LTEIKSSGARPDRYSYNTMIYAYGRKGQMKEAS 689
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
LF E + G++ D V Y+ + E+ +D+V M
Sbjct: 690 RLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYM------------------- 730
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+++GC P + TY SI+ YCR + A+ + Q
Sbjct: 731 ----------------VTRGCKPNERTYNSILQEYCRHGKIADAKSFLSNLPQ 767
>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 196/433 (45%), Gaps = 6/433 (1%)
Query: 139 LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYN 197
L + ++ V P+A T + RA++ K A LQ+ G FN+ + G+
Sbjct: 235 LLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFC 294
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
+ + V++ MK G V D Y +++ K GD + +E +
Sbjct: 295 HDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLV 354
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S Y L L ++GR A + F+ +K++G D +Y+ ++ ++++ +L+
Sbjct: 355 S---YSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLW 411
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNGFSK 376
+ + D L+ Y +++ L+V E M + + ++C I V+GFS
Sbjct: 412 NDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGI-CPNVVTCTILVHGFSN 470
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A +++ G +P TY IIN C++ + +F +M ++G+ V
Sbjct: 471 EGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVL 530
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
YS ++ + K +++A L KM +G +PN++ Y SL++ L +V L+K M
Sbjct: 531 YSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMI 590
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+TPD++ YT++I+ Y + ++ + E G D + ++G FSK+ ++
Sbjct: 591 GEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMD 650
Query: 557 ELVKLLQDMKSEG 569
+++M ++G
Sbjct: 651 GAQLFMEEMMNKG 663
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 129/308 (41%), Gaps = 6/308 (1%)
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKL----AEELFKEAEEKGMLRDPEVCLKLV 336
F DMK G P+IY+ + KL A+EL E E +G+ + +
Sbjct: 198 LFDDMKISG--PSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYL 255
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
V+ + ++ + + A+++GF AV+V++ + G +
Sbjct: 256 YGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFV 315
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P +Y+ +++ C+ + +EM + G +V+YSS++ + GR+ A L
Sbjct: 316 PDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFEL 375
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
++K +G + + +Y+ ++ + +L LW +M PD +Y+++I AY R
Sbjct: 376 FKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCR 435
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
R+ ++ + +G + I+V FS I E L ++ G +
Sbjct: 436 HRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCT 495
Query: 577 YHSAMNAL 584
Y +N L
Sbjct: 496 YRVIINGL 503
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 4/190 (2%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
YA++I + ++++ A ++E ++ G + V + ++ + +I L M
Sbjct: 145 VYATVIRVFVELSMFEDALVTYVEAKKVGVELQVCNF--LLKGLVEGNQIMYVRSLFDDM 202
Query: 461 KAKGCEPNVWIYNSLMDM--HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
K G PN++ Y+ LM M HG L + ++L EME V P+ +Y T + RA+
Sbjct: 203 KISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAK 262
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ F G + ++ F Q+ + V++ MK G D Y
Sbjct: 263 QVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYS 322
Query: 579 SAMNALRDAG 588
++ L G
Sbjct: 323 ILVDGLCKQG 332
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 2/170 (1%)
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRI--RDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+F +M+ G + +YS +++MY ++ +A L+++M+ +G PN Y + +
Sbjct: 198 LFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYG 257
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
RAK ++ + + +R + + VI + + V+ ++ + G V D
Sbjct: 258 LCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPD 317
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
I+V K + +L +M G + Y S ++ L AG
Sbjct: 318 VHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAG 367
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 202/472 (42%), Gaps = 20/472 (4%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
+IR L +K V++ K+ P A + ++ + +++ + L +G
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEG 220
Query: 183 EI--ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
+ +++ + + KL S I + +MK G+ + Y ++ ++K+ +
Sbjct: 221 HCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGA 280
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
LF E + + F+ Y L LGK+GR EA FF +M+ +G D + ++
Sbjct: 281 LGLFEEMRHQYCRPDVFT---YTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNM 337
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDV------V 352
I + A +LF EE G L+ C+ V+ Y I + L E +
Sbjct: 338 INFLGKAGRLDDAVKLF---EEMGTLQ----CIPSVVTYNTIIKALFESKSRISEISSWF 390
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
E MK + + S +++GF K A+ + E++ +G P Y S+I+A +
Sbjct: 391 ERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 450
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
Y A ++F E+++ Y+ M+ GK GR+ DA+ L +M GC PNV+ Y
Sbjct: 451 KRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAY 510
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N+LM RA L + + M+ PD SY +++ + ++ + +
Sbjct: 511 NALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 570
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ D ++G S EE KL+++M G + D Y S + A+
Sbjct: 571 SAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAI 622
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 154/368 (41%), Gaps = 3/368 (0%)
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
G EKV L+ E S + P T Y L + K GR A++ +MK+ G+
Sbjct: 204 GQYEKVHELYNEM-SNEGHCFP-DTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTA 261
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
IY LI F + V A LF+E + D +L+ + G ++ +
Sbjct: 262 KIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHE 321
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA-YCRIA 413
M+ + + ++N K AVK++E++ + CIP VTY +II A + +
Sbjct: 322 MRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKS 381
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
S+ F M+ G YS ++ + KT R AM L+ +M KG P Y
Sbjct: 382 RISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYC 441
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
SL+D G+AK +L++E++ + Y +I +A D V ++E
Sbjct: 442 SLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKL 501
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G + ++ ++ ++E + ++ M+ G D Y+ +N L G +A
Sbjct: 502 GCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRA 561
Query: 594 QWLQQNFE 601
+ N +
Sbjct: 562 MEMLSNMK 569
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/451 (19%), Positives = 173/451 (38%), Gaps = 42/451 (9%)
Query: 68 NRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYL 127
N S+ PD + + + K + Q+ A NE K +P +LI
Sbjct: 214 NEMSNEGHCFPDTVTYSALISAFCKLGR-QDSAIRLLNEMKD-NGMQPTAKIYTMLIALF 271
Query: 128 VQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIAL 186
+ + L E+ + PD T + L+ +A +F A +G
Sbjct: 272 FKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDT 331
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS-EKVAALFL 245
+ N+ + K + ++E+M + + Y I++A ++ ++++ F
Sbjct: 332 VVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFE 391
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
K + +PF+ Y IL D K+ R +A+ +M EKG P+ Y SLI +
Sbjct: 392 RMKGSGISPSPFT---YSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALG 448
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+A ELF+E +E V ++ + G ++
Sbjct: 449 KAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDD------------------ 490
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
AV +++++ GC P Y ++++ R + +A M
Sbjct: 491 -----------------AVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRM 533
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
Q+ G + +Y+ ++ KTG AM +++ MK +P+ YN+++ A
Sbjct: 534 QEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLF 593
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ KL KEM D ++Y++++ A +
Sbjct: 594 EEAAKLMKEMNVLGFEYDLITYSSILEAIGK 624
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 15/213 (7%)
Query: 381 WAAVKV-YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA--- 436
WAA K YE S TY ++I + Y + K+ EM + CVV
Sbjct: 108 WAAKKRNYEHDTS--------TYMALIRCLEVVEQYGEMWKMIQEMVRNPV--CVVTPME 157
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
S ++ M G I A+ + ++K + C+P YNS++ M +V +L+ EM
Sbjct: 158 LSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMS 217
Query: 497 RR-KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
PD V+Y+ +ISA+ + D ++ NE + NG I +++ +F KL+ +
Sbjct: 218 NEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNV 277
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ L ++M+ + + D Y + L AG
Sbjct: 278 HGALGLFEEMRHQYCRPDVFTYTELIRGLGKAG 310
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 36/218 (16%)
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM-- 443
+ E + + C+ + + II + SKA +F +++ + AY+SM+ M
Sbjct: 142 IQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLM 201
Query: 444 ----------------------------------YGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ K GR A+ L+ +MK G +P
Sbjct: 202 HEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTA 261
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
IY L+ + + N+ L++EM + PD +YT +I +A FD F++E
Sbjct: 262 KIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHE 321
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
R G D + M+ K ++++ VKL ++M +
Sbjct: 322 MRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGT 359
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 122/510 (23%), Positives = 219/510 (42%), Gaps = 11/510 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD ++ ++G K + + A + + E L F P K+L + + K + + V
Sbjct: 271 PDVHSYNIMINGFCKIKRVDK-ALNLFKEMI-LSRFPPIIQFNKILDSF-AKMKHYSTAV 327
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
SLS ++ + PD T + L+ + ++L + G + + N+ + G
Sbjct: 328 SLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGL 387
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS-- 254
+ ++K+ + G L+ Y ++ KIGD+ L RK+D
Sbjct: 388 CLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLL-----RKIDGRL 442
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
T + MY + D+L K EA F +M KGI D Y++LI F + ++K A
Sbjct: 443 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAI 502
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
L E K + D LV +EG V++ V+ M A +K ++NG+
Sbjct: 503 GLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGY 562
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
A V+ + G P TY +IN +C+ + +A +F EM QK
Sbjct: 563 LLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDT 622
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V YSS+V K+GRI L+ +M+ +G +V YNSL+D + +L + L+ +
Sbjct: 623 VTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNK 682
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+ + + P+ ++T ++ + + + + G +D I +M+ K
Sbjct: 683 MKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGL 742
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+EE + +L M+ G + + +NAL
Sbjct: 743 LEEALTMLSKMEENGCIPNAVTFDIIINAL 772
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 196/457 (42%), Gaps = 11/457 (2%)
Query: 139 LSEDFKIYNVL------PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNS 191
L E + NV+ P+ T + LV + + K K A ++L V + + ++ +++
Sbjct: 184 LKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYST 243
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
M GY ++ V+ M G+ D Y ++ + KI +K LF K
Sbjct: 244 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLF---KEMI 300
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
L P KIL DS K A+ ++ KGI D LI F + ++
Sbjct: 301 LSRFPPIIQFNKIL-DSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQIT 359
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
+ + ++G L+ +G V+K L + + +++ ++
Sbjct: 360 FGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLI 419
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
NG K A+K+ ++ + P Y++II+A C+ L S+A +F EM KG
Sbjct: 420 NGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS 479
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
VV YS+++ + G++++A+ L+ +M K P+V Y L+D G+ +++ + +
Sbjct: 480 ADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSV 539
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
M + V PD +Y T+++ Y E +N + G D I++ F K
Sbjct: 540 LAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK 599
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
++E + L ++M + D Y S ++ L +G
Sbjct: 600 SKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSG 636
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 142/327 (43%), Gaps = 3/327 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++ +M GI D Y ++ + +G ++ L E + ++ Y IL D
Sbjct: 469 LFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINP---DVRTYTILVD 525
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+LGK G+ EA M + + D Y +L+ + + EVK A+ +F G+
Sbjct: 526 ALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTP 585
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ + + +V++ L++ + M + ++V+G K +
Sbjct: 586 DVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLI 645
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++ +G +TY S+I+ C+ KA +F +M+ +G ++ ++ K
Sbjct: 646 DEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKG 705
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR++DA + + KG +V+IYN ++ H + L + + +ME P+ V++
Sbjct: 706 GRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTF 765
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNG 534
+I+A + E D K + G
Sbjct: 766 DIIINALFKKDENDKAEKLLRQMIARG 792
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 108/224 (48%)
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
+G V++ L + + +++ ++NG + AA+K ++ + P
Sbjct: 76 KGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEM 135
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y +II+A C+ L S+A +F EM KG VV YS+++ + G++++A+ L+ M
Sbjct: 136 YNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMV 195
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
K PNV YN L+D + +++ + + M + V + ++Y+T++ Y E
Sbjct: 196 LKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVK 255
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+N + G D IM+ F K+ ++++ + L ++M
Sbjct: 256 KAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEM 299
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 160/399 (40%), Gaps = 49/399 (12%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD---STPFSTHMYKIL 265
++K+ + G L+ Y ++ +IGD+ + A FL RK+D + P + MY +
Sbjct: 86 HDKLLAQGFQLNQVSYATLINGVCRIGDT-RAAIKFL----RKIDGRLAKP-NVEMYNTI 139
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
D+L K EA F +M KGI + Y++LI F + ++K A L K +
Sbjct: 140 IDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTI 199
Query: 326 LRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
+P VC +L+ +EG V++ V+ M A C+ ++
Sbjct: 200 --NPNVCTYNILVDALCKEGKVKEAKSVLAVMLKA------CVKSNVI------------ 239
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
TY+++++ Y + KA+ VF M G V +Y+ M+
Sbjct: 240 -----------------TYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMING 282
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+ K R+ A+ L +M P + +N ++D + K+ L +E + + PD
Sbjct: 283 FCKIKRVDKALNLFKEMILSRFPPIIQ-FNKILDSFAKMKHYSTAVSLSHRLELKGIQPD 341
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+ +I+ + + + G ++ Q+++ +
Sbjct: 342 LFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHD 401
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+ ++G +L++ Y + +N + G A L + +G
Sbjct: 402 KLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDG 440
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 110/274 (40%), Gaps = 35/274 (12%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P T L L G+ EAL F + +G + YA+LI I + + A +
Sbjct: 60 PPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIK 119
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
++ + G L P V M N I++
Sbjct: 120 FLRKID--GRLAKPNV----------------------EMYN-----------TIIDALC 144
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K + A ++ ++ +G VTY+++I +C + +A + M K + V
Sbjct: 145 KYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVC 204
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+ +V K G++++A ++A M + NV Y++LMD + +++ + ++ M
Sbjct: 205 TYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAM 264
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
VTPD SY +I+ + + + D + + E
Sbjct: 265 SLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKE 298
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 110/252 (43%), Gaps = 10/252 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ ++G L + ++ + + A L P+ T +LI +SK D +
Sbjct: 550 PDVFTYNTLMNGYLLVYEVKKAQHVF--NAMSLMGVTPDVHTYTILINGFCKSKMVDEAL 607
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+L ++ N++PD T S LV ++ + L+ G+ A ++ +NS + G
Sbjct: 608 NLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGL 667
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDS 254
K I ++ KMK GI ++ + +++ K G + +F L K LD
Sbjct: 668 CKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLD- 726
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
++Y ++ K G EAL M+E G + + + +I + E AE
Sbjct: 727 ----VYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAE 782
Query: 315 ELFKEAEEKGML 326
+L ++ +G+L
Sbjct: 783 KLLRQMIARGLL 794
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 69/133 (51%)
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
++ V +++ +G P VT ++I C +A ++ +GF V+Y++++
Sbjct: 46 VSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLI 105
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ G R A+ + K+ + +PNV +YN+++D + + + + L+ EM + ++
Sbjct: 106 NGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGIS 165
Query: 502 PDKVSYTTVISAY 514
+ V+Y+T+I +
Sbjct: 166 ANVVTYSTLIYGF 178
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 191/466 (40%), Gaps = 69/466 (14%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+ N+ + GY KL L K+ AG+ LD+ Y ++ Y + + + A+FL
Sbjct: 204 IFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFL 263
Query: 246 E--------------------CKSRKLDST-------------PFSTHMYKILCDSLGKS 272
C++R++D P + Y ++ +L +
Sbjct: 264 SMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWP-TVRTYTVIIFALCQL 322
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
GR EAL F++M EK + Y LICS + A+++ EKG++
Sbjct: 323 GRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTY 382
Query: 333 LKLVLMYIEEGL-----------------------------------VEKTLDVVESMKN 357
L+ Y ++GL + K + ++ M
Sbjct: 383 NALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLE 442
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
KL+ + +++G K +A K+ + G +P + TY+ I+ C+ L +
Sbjct: 443 RKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEE 502
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A +F +++KG V YS+++ Y K G++ D +L+ KM + GC PN YNSL+D
Sbjct: 503 ARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLID 562
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ + KN ++ L M +R + P +YT +I + EFD +++ G
Sbjct: 563 GYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHP 622
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
D I + + ++++ L+ M ++G D LY ++A
Sbjct: 623 DVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDA 668
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/514 (20%), Positives = 213/514 (41%), Gaps = 34/514 (6%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T ++I L Q + +++ ++ + P+ HT + L+ S F A +
Sbjct: 307 PTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKI 366
Query: 175 LQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L + G I +++ +N+ + GY K + S + + M+S ++ Y +++ + +
Sbjct: 367 LNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCR 426
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ K +L + RKL + Y IL K G A K M E G++ D
Sbjct: 427 GKNIHKAMSLLHKMLERKLQPNVVT---YNILIHGQCKEGDLGSAYKLLSLMNESGLVPD 483
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y+ I + V+ A LF+ +EKG+ + + L+ Y + G V +++
Sbjct: 484 EWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLD 543
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M +A + ++++G+ K + + A + + +I + P TY +I+ +
Sbjct: 544 KMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDD 603
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ +A +F +M G V Y++ + Y GR++DA L+ KM AKG P+ +Y
Sbjct: 604 EFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYT 663
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR--------------- 518
+D +GR ++ + K M P +Y+ +I + A+
Sbjct: 664 LFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSS 723
Query: 519 --------------EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+++ + + + +G + G + K+ +E +L
Sbjct: 724 GVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDH 783
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQA-QWLQ 597
MK +G +E +Y+S + GL +A +WL
Sbjct: 784 MKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLD 817
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 139/326 (42%)
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
K G EA + + + G+ D Y SLI + V A +F KG LR+
Sbjct: 216 KLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEV 275
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
L+ + E V++ L + M + I+ + A+ +++++
Sbjct: 276 SYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEM 335
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+ C P TY +I + C + + A+K+ M +KG VV Y++++ Y K G
Sbjct: 336 TEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLS 395
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
A+ +++ M++ C PN YN L+ R KN+ + L +M RK+ P+ V+Y +
Sbjct: 396 ASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNIL 455
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
I + + K + +G V D + + K +EE L + +K +G
Sbjct: 456 IHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGI 515
Query: 571 KLDERLYHSAMNALRDAGLQMQAQWL 596
K +E +Y + ++ G ++L
Sbjct: 516 KANEVIYSTLIDGYCKVGKVSDGRFL 541
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 162/413 (39%), Gaps = 41/413 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+A+ ++ + G + + + ++ + +P T +LI + S
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLER--KLQPNVVTYNILIHGQCKEGDLGSAY 469
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
L ++PD T S + + + + A +L + G A + +++ + GY
Sbjct: 470 KLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGY 529
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K+ + +KM SAG V +S Y +++ Y K + K A L ++ ++ D P
Sbjct: 530 CKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCK-EKNFKEARLLVDIMIKR-DIEP 587
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y IL D+L K +A F M G D IY + I ++ S +K AE L
Sbjct: 588 -AADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVL 646
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD-CISCAI----- 370
+ KG++ D + + Y G ++ +++ M + S SC I
Sbjct: 647 ICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSN 706
Query: 371 --------------------VNGFS---KRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
N FS +R Y + ++ ++ GC P TY I
Sbjct: 707 AKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFIT 766
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM------VAMYGKTGRIRDAM 454
C++ A ++F M++KG Y+S+ + +YG+ R D M
Sbjct: 767 GLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIM 819
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/524 (22%), Positives = 225/524 (42%), Gaps = 14/524 (2%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEA----KKLPEFRPEKSTLKL--LIRYLVQSKKWDSI 136
F S LH + ++ L ++ ++A ++ P S + ++ + + K++ ++
Sbjct: 37 FLSLLHNRFR---SKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTV 93
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+SLS + + + +T + L+ S + A ++L + G + +F + + G
Sbjct: 94 LSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKG 153
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ +++KM G D Y ++ K G + AA+ L K +
Sbjct: 154 LCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTS--AAIRLLRSMEKGNCQ 211
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P +Y L SL K + +A F +M KGI + SL+ + ++ E K
Sbjct: 212 P-DVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNT 270
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L E + ++ + +V +EG+V + DVV+ M + ++ A+++G
Sbjct: 271 LLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHC 330
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
R AVKV++ ++ +GC P +Y ++IN YC+I KA +F EM ++ V
Sbjct: 331 LRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTV 390
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y++++ GR++DA+ L +M A G P++ Y L+D + +L + L K +
Sbjct: 391 TYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAI 450
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
E + PD YT VI RA E + ++ G + IM K +
Sbjct: 451 EGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLL 510
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNA-LRDAGLQMQAQWLQQ 598
+E KL +M D Y++ LR+ Q L++
Sbjct: 511 DEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEE 554
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 179/409 (43%), Gaps = 24/409 (5%)
Query: 203 YSTIL-VYEKMKSAGI---------VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
YST+L + KM S GI +++S +C + + K+ L L C+
Sbjct: 90 YSTVLSLSRKMDSFGIPHNVYTLNVLINS--FCHLNRVNFAFSVLAKI--LKLGCQP--- 142
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D+ F+T + K LC G+ EAL F M +G D IYA+LI
Sbjct: 143 DTASFTT-LIKGLC----LEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSA 197
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L + E+ D V L+ ++ + ++ M + + ++C +
Sbjct: 198 AIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGIS-PNIVTCNSLV 256
Query: 373 GFSKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
G W V + +++ +P ++ ++++A C+ + ++A V M Q G +
Sbjct: 257 YALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVE 316
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
VV Y++++ + + +A+ + M KGC PNV+ YN+L++ + + + + + L
Sbjct: 317 PDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYL 376
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
++EM R+K+ P+ V+Y T+I + + E G + D I++ K
Sbjct: 377 FEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCK 436
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+++ + LL+ ++ D ++Y ++ + AG A+ L N
Sbjct: 437 NCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNL 485
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 105/491 (21%), Positives = 189/491 (38%), Gaps = 45/491 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F + + G+ + Q E + + + F+P+ LI L ++ + +
Sbjct: 142 PDTASFTTLIKGLCLEGQIGEALHLF--DKMIWEGFQPDVVIYATLINGLCKTGHTSAAI 199
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L + N PD L+ S + R+ A L IT G ++ NS
Sbjct: 200 RLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNS----- 254
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
LVY A +G+ + V L E K+
Sbjct: 255 ----------LVY--------------------ALCNLGEWKHVNTLLNEMVDSKIMPNA 284
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
S + D+L K G +A M + G+ D Y +LI +E+ A ++
Sbjct: 285 IS---LTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKV 341
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F KG + L+ Y + ++K + + E M KL + +++G
Sbjct: 342 FDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCH 401
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A+ ++ ++++ G IP VTY +++ C+ KA + ++ D +
Sbjct: 402 VGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQI 461
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN--LRQVEKLWKE 494
Y+ ++ + G + DA L + + +KG +PNVW YN + HG K L + KL+ E
Sbjct: 462 YTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIM--THGLCKRGLLDEATKLFME 519
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+ + D +Y T+ + R E ++ E G D + ++VG+ S
Sbjct: 520 MDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGL 579
Query: 555 IEELVKLLQDM 565
+ L+DM
Sbjct: 580 DQSEAHKLEDM 590
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 185/429 (43%), Gaps = 5/429 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
P+ LI +++ D+ + L + + P ++ + L++S AR+ A
Sbjct: 84 LEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAE 143
Query: 173 TLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
L F GEI A+N+ + GY K+ + V ++M G+ D Y +++A
Sbjct: 144 ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDA 203
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y + G E L E ++ D S++++ + G +A R+M G+
Sbjct: 204 YTRAGRWESARILLKEMEA---DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGV 260
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
D Y +I +F + A + F E+G+ D L+ + + G ++ ++
Sbjct: 261 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIE 320
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ + M+ + + ++N + + + + ++ QG +P +TY ++++ Y
Sbjct: 321 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 380
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
R + +A M+ G Y ++V Y + G A+ +V M+A G E +
Sbjct: 381 RSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTV 440
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+ NSL++ G + + + + + M+ + PD ++YTT++ A R +F+ Y E
Sbjct: 441 VLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEM 500
Query: 531 RMNGGVIDR 539
+G DR
Sbjct: 501 ITSGCAPDR 509
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 160/360 (44%), Gaps = 17/360 (4%)
Query: 234 IGDSEKVA---ALFLE------CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
+G + +VA ALFLE K R T Y L K G A + +
Sbjct: 133 LGSARRVAEAEALFLEFFLAGEIKPR--------TRAYNALLKGYVKIGSLKNAEQVLDE 184
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M + G+ D + Y+ L+ ++ + A L KE E G+ V +++ + + G
Sbjct: 185 MSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGE 244
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+K V+ M + ++ +++ F K A+ ++++ +G P VT+ +
Sbjct: 245 WQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNT 304
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I+A+C+ + +A ++F EM++ Y+ M+ + G+ R ++A+MK +G
Sbjct: 305 LIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQG 364
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
PN+ Y +L+D++GR+ ++ + M+ + P Y +++AY + D +
Sbjct: 365 LVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHAL 424
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
R +G + ++ F + +I E +LQ MK G + D Y + M AL
Sbjct: 425 NVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKAL 484
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 137/321 (42%), Gaps = 9/321 (2%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE----AEEKGMLRDPEVCL 333
AL+ + G+ + +LI S S V AE LF E E K R L
Sbjct: 107 ALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALL 166
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY-EQLIS 392
K Y++ G ++ V++ M + + +V+ ++ R G W + ++ +++ +
Sbjct: 167 K---GYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYT-RAGRWESARILLKEMEA 222
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
G P ++ I+ + + KA V EM G Y+ M+ +GK +
Sbjct: 223 DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGH 282
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
AM +M+ +G EP+V +N+L+D H + + +L+ EM +Y +I+
Sbjct: 283 AMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMIN 342
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ ++ E + G V + +V V+ + + +E V ++ MK++G K
Sbjct: 343 LLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKP 402
Query: 573 DERLYHSAMNALRDAGLQMQA 593
+YH+ +NA GL A
Sbjct: 403 SSTMYHALVNAYAQRGLADHA 423
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 149/354 (42%), Gaps = 39/354 (11%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
E +P L++ V+ + + ++ V PD T S LV + RA +++ A
Sbjct: 154 EIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 213
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGY-------------NKLHM--------YYSTIL-- 207
LL+ DG + + F+ + G+ ++H +Y+ ++
Sbjct: 214 RILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDT 273
Query: 208 ------------VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+++M+ GI D + +++A+ K G ++ LF E + +
Sbjct: 274 FGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRE---SNC 330
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P T Y I+ + LG+ R +MKE+G++ + Y +L+ + K A +
Sbjct: 331 PLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVD 390
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ + G+ + LV Y + GL + L+VV++M+ L+ S + +++N F
Sbjct: 391 CIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFG 450
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+ R A V + + G P +TY +++ A R+ + K ++ EM G
Sbjct: 451 EDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSG 504
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/536 (22%), Positives = 229/536 (42%), Gaps = 16/536 (2%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I+L D +P F L G++ + +L Y + ++ + R + + +LI
Sbjct: 64 IDLFSDMLRSRPLPSVVDF-CKLMGVVVRMERPDLVISLYQKMER-KQIRCDIYSFNILI 121
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGE 183
+ K +S + PD T + L+ CV R + N Q+F T
Sbjct: 122 KCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCR 181
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ F + M G + + + ++M G+ Y I++ K GD+ V+AL
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT--VSAL 239
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
L K ++ + +Y + DSL K GR +A F +M+EKGI D Y S+I
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
F S AE+L +E E+ + D L+ +++EG + ++ + M + +
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
++++GF K+ AA ++ + ++GC P +T+ ++I+ YC ++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM + G Y++++ + G + A+ L+ +M + G P++ ++L+D
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 484 NLRQVEKLWKEMERRK-----------VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
L+ +++K M++ K V PD +Y +IS +F + Y E
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G V D M+ K S+++E ++ M S+ + + + +N AG
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/469 (18%), Positives = 206/469 (43%), Gaps = 18/469 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + + + GM K T A + + +++ P +I L + +
Sbjct: 217 PTQITYGTIVDGMCKKGDTVS-ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGG 195
+L + + + PD T + ++ + ++ A LLQ + + +I+ ++ +N+ +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML-ERKISPDVVTYNALINA 334
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K ++ +Y++M GI+ ++ Y +++ + K + +F ++
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ + L D + R + ++ +M E G++ D + Y +LI F + ++ A +
Sbjct: 395 LIT---FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK--LKISDCISCA---- 369
L +E G+ D C L+ + G ++ L++ + M+ +K L S +
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 370 -----IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++G + A ++YE++ +G +P +TY+S+I+ C+ + +A ++F
Sbjct: 512 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M K F VV +++++ Y K GR+ D + L +M +G N Y +L+ + N
Sbjct: 572 MGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+ +++EM V PD ++ +++ E V + +M+
Sbjct: 632 INGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/520 (20%), Positives = 214/520 (41%), Gaps = 18/520 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F + LHG+ + + E A + +++ + RP T L+ L + + V
Sbjct: 147 PDVVTFTTLLHGLCVEDRVSE-ALNLFHQMFE-TTCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 138 SLSEDFKIYNVLPDAHTCSRLV-ASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
+L + + P T +V C + N L ++ I ++ +++ +
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K + ++ +M+ GI D Y ++ + G L E RK+
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y L ++ K G+ FEA + + +M +GI+ + Y+S+I F + AE
Sbjct: 325 VVT---YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F KG + L+ Y ++ ++++ M L +++GF
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ-------- 427
AA+ + +++IS G P VT ++++ C A ++F MQ+
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 428 ---KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
G + V Y+ +++ G+ +A L +M +G P+ Y+S++D +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
L + +++ M + +P+ V++TT+I+ Y +A D ++ + E G V +
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ F K+ I + + Q+M S G D + + L
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 147/349 (42%), Gaps = 47/349 (13%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKE-KGILEDPSIYASLICSFASITEVKLAEELFKEA 320
Y + D + K G AL R M+E I+ + IY+++I S A+ LF E
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
+EKG+ D L SM + GF +
Sbjct: 282 QEKGIFPD--------------------LFTYNSM---------------IVGFCSSGRW 306
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A ++ ++++ + P VTY ++INA+ + + +AE+++ EM +G + YSSM
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM 366
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ + K R+ A + M KGC PN+ +N+L+D + AK + +L EM +
Sbjct: 367 IDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF---SKLSQIEE 557
D +Y T+I + + + + E +G D ++ KL E
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Query: 558 LVKLLQDMKSE--------GTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+ K++Q K + G + D + Y+ ++ L + G ++A+ L +
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 535
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/536 (22%), Positives = 230/536 (42%), Gaps = 16/536 (2%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I+L D +P F L G++ + +L Y + ++ + R + + +LI
Sbjct: 64 IDLFSDMLRSRPLPSVVDF-CKLMGVVVRMERPDLVISLYQKMER-KQIRCDIYSFNILI 121
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGE 183
+ K +S + PD T + L+ CV R + + Q+F T
Sbjct: 122 KCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCR 181
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ F + M G + + + ++M G+ Y I++ K GD+ V+AL
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT--VSAL 239
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
L K ++ + +Y + DSL K GR +A F +M+EKGI D Y S+I
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
F S AE+L +E E+ + D L+ +++EG + ++ + M + +
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 359
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
++++GF K+ AA ++ + ++GC P T+ ++I+ YC ++
Sbjct: 360 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 419
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM ++G V Y++++ + G + A+ L +M + G P++ N+L+D
Sbjct: 420 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 479
Query: 484 NLRQVEKLWKEMERRK-----------VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
L+ +++K M++ K V PD ++Y +I +F + Y E
Sbjct: 480 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 539
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G V D M+ K S+++E ++ M S+ + +++ +N AG
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG 595
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/471 (18%), Positives = 213/471 (45%), Gaps = 18/471 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + + + GM K T A + + +++ P +I L + +
Sbjct: 217 PTQITYGTIVDGMCKKGDTVS-ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGG 195
+L + + + PD T + ++ + ++ A LLQ + + +I+ ++ +N+ +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML-ERKISPDVVTYNALINA 334
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K ++ +Y++M GI+ ++ Y +++ + K + +F ++
Sbjct: 335 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 394
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
F+ + L D + R + ++ +M +G++ + Y +LI F + ++ A +
Sbjct: 395 VFT---FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALD 451
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS----------DC 365
L ++ G+ D C L+ + G ++ L++ ++M+ +K+ + D
Sbjct: 452 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDV 511
Query: 366 ISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
++ I + G + A ++YE++ +G +P +TY+S+I+ C+ + +A ++F+
Sbjct: 512 LTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVS 571
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M K F VV +++++ Y K GR+ D + L +M +G + IY +L+ + N
Sbjct: 572 MGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGN 631
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ +++EM V PD ++ +++ + E + V + +M+ G
Sbjct: 632 INGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSVG 682
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 92/215 (42%), Gaps = 1/215 (0%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+ + ++ G P VT+ ++++ C S+A F +M + VV +++++
Sbjct: 133 ALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMN 192
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD-MHGRAKNLRQVEKLWKEMERRKVT 501
+ GRI +A+ L+ +M G +P Y +++D M + + + L K E +
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ V Y+ +I + + + E + G D M+ F + + +L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
LQ+M D Y++ +NA G +A L
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAAEL 347
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 199/494 (40%), Gaps = 7/494 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F++ LH + + E K+ K T + IR L + + + V
Sbjct: 209 PDVATFNNVLHALCQKGDVMESGALLAKVLKR--GMSANKFTCNIWIRGLCEDGRLEEAV 266
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL-LAFNSAMGGY 196
+L E Y V PD T + L+ + K + A L + G I +N+ + GY
Sbjct: 267 ALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGY 325
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K M + + G V D YC ++ GD E+ LF E +++ L
Sbjct: 326 CKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKP-- 383
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+Y L L + G AL+ +M E+G D Y +I + + A +
Sbjct: 384 -DLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVV 442
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+A KG L D L+ Y + ++ L +VE M + +++NG K
Sbjct: 443 MNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCK 502
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ +E++I +GC P +TY +I +C+I +A V + M Q G V+
Sbjct: 503 AGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVS 562
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
+++++ + + G + A L K+ KG +N L+ + N++ EK++ EM
Sbjct: 563 FNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMI 622
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ PD +Y ++ +A D E G V A G M+ + + ++
Sbjct: 623 SKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVS 682
Query: 557 ELVKLLQDMKSEGT 570
E V ++ M G
Sbjct: 683 EAVAIIHIMVRMGV 696
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 137/323 (42%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y + D KSG EA + +D KG + D Y SLI + +++ A ELF EA+
Sbjct: 318 YNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQ 377
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
K + D V LV +GL+ L V+ M I+NG K
Sbjct: 378 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNIS 437
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A V I +G +P T+ ++I+ YC+ A ++ M G V+ Y+S++
Sbjct: 438 DAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVL 497
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
K G+ ++ +M KGC PN YN L++ + L + + M + +
Sbjct: 498 NGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLV 557
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD VS+ T+I + R + D + + G I++G +S ++ K+
Sbjct: 558 PDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 617
Query: 562 LQDMKSEGTKLDERLYHSAMNAL 584
+M S+G K D Y ++ L
Sbjct: 618 FGEMISKGYKPDLYTYRILVDGL 640
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 179/414 (43%), Gaps = 7/414 (1%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
A+N+ M + VY +M +AG+ D+ + ++++ G L
Sbjct: 108 AYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSL 167
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
R D+ P + Y + L G + A F +M + + D + + +++ +
Sbjct: 168 SERGCDAKPAA---YCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQK 224
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+V + L + ++GM + C + E+G +E+ + +VE M A +
Sbjct: 225 GDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTY 283
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++ G K A + ++++QGCIP TY +II+ YC+ + +A ++ +
Sbjct: 284 NTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVF 343
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
KGF V Y S++ G I A+ L + +AK +P++ +YNSL+ R +
Sbjct: 344 KGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILH 403
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
++ EM PD +Y +I+ + N+ + G + D ++
Sbjct: 404 ALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLID 463
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ K +++ ++L++ M + G D Y+S +N L AG +A+ + + FE
Sbjct: 464 GYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAG---KAKEVNETFE 514
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 160/405 (39%), Gaps = 41/405 (10%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
EL +D+ + VPD + S ++G+ + E A + +NEA+ + +P+ L++
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDI-ERALELFNEAQA-KDLKPDLVVYNSLVK 393
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA 185
L + + + + PD T + ++ + A ++ I G +
Sbjct: 394 GLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLP 453
Query: 186 -LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+ FN+ + GY K S + + E+M + GI D Y ++ K G +++V F
Sbjct: 454 DVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETF 513
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E + + Y IL ++ K + EA M + G++ D + +LI F
Sbjct: 514 EEMILKGCRPNAIT---YNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGF 570
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
++ A LF++ +EKG T D
Sbjct: 571 CRNGDLDGAYLLFQKLDEKGY--------------------SATADTFN----------- 599
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
++ +S + A K++ ++IS+G P TY +++ C+ A +A E
Sbjct: 600 ----ILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAE 655
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
M KGF + + M+ + R+ +A+ ++ M G P V
Sbjct: 656 MISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEV 700
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 8/234 (3%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
A + +++ AAV +E++ C P Y +I++A A + +A KV++ M
Sbjct: 76 ASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAA 135
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD---MHGRAKNL 485
G ++ + + TGR A+ L+ + +GC+ Y +++ HG N
Sbjct: 136 GVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNA 195
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
R L+ EM R V PD ++ V+ A + + + G ++ I
Sbjct: 196 RH---LFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIW 252
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL-RDAGLQMQAQWLQQ 598
+ + ++EE V L++ M + D Y++ M L +D+ +Q AQ+L +
Sbjct: 253 IRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGR 305
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 213/475 (44%), Gaps = 9/475 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
+P +++ LV+ +++ + + K + PD + ++ +A K +
Sbjct: 473 LKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGK 532
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ L I G + + + + + GY + + + +M +GI + +++ Y
Sbjct: 533 SYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGY 592
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K G++ K A F C + TH +L L K+G+ EA+ F ++ +KG++
Sbjct: 593 CKDGNTTKAFAKF-RCMLDQGVLPDVQTH--SVLIHGLSKNGKLQEAMGVFSELLDKGLV 649
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTL 349
D Y SLI + ++K A EL + +KG+ +P + L+ + G + K
Sbjct: 650 PDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGI--NPNIVTYNALINGLCKLGEIAKAR 707
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
++ + + L + I+ G+ K A +++ + G P Y ++I+
Sbjct: 708 ELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGC 767
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ KA +F+ M ++G A+++++ + K G++ +A LV M PN
Sbjct: 768 CKAGNTEKALSLFLGMVEEGIAS-TPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNH 826
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
Y L++ H N+++ E+L+ EM++R V P+ ++YT+++ YNR ++E
Sbjct: 827 VTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDE 886
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G D +MV K + +KL+ DM SEG + + LY ++AL
Sbjct: 887 MVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDAL 941
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 162/358 (45%), Gaps = 4/358 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ ++ G+V D Y ++ K GD + L + + ++ + Y L +
Sbjct: 639 VFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVT---YNALIN 695
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L K G +A + F + EKG+ + Y+++I + + A +LF + G+
Sbjct: 696 GLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPP 755
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D V L+ + G EK L + M + + + A+++GF K A ++
Sbjct: 756 DSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFN-ALIDGFFKLGKLIEAYQLV 814
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
E ++ P VTY +I +C + +AE++F+EMQ++ V+ Y+S++ Y +
Sbjct: 815 EDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRI 874
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR + L +M A+G +P+ ++ ++D H + N + KL +M V K Y
Sbjct: 875 GRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLY 934
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
T +I A + +K +E G + A G +V F + + +E +++L+ M
Sbjct: 935 TILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 111/548 (20%), Positives = 231/548 (42%), Gaps = 45/548 (8%)
Query: 85 SFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFK 144
+ +HG+ K ++ A D ++E + +P+ T LI + + + L + K
Sbjct: 377 ALIHGLCKIGDLEK-AEDLFSEMTMMG-IKPDIQTYNCLIEGYYKVQNMEKAYELLIEIK 434
Query: 145 IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYY 203
N+ +A+ C +V AN L Q I+ G + ++ + + + G K +
Sbjct: 435 KENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFE 494
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYK 263
I + MK G+ D CY ++ + K G E+ + +E ++ L ++ Y
Sbjct: 495 EAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYT---YG 551
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
++G A + F +M + GI + I LI + A F+ ++
Sbjct: 552 AFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQ 611
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G+L D + L+ + G +++ + V + + L ++++ K AA
Sbjct: 612 GVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAA 671
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
++++ + +G P VTY ++IN C++ +KA ++F + +KG + V YS+++A
Sbjct: 672 FELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAG 731
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN--------LRQVE------ 489
Y K+ + +A L MK G P+ ++Y +L+D +A N L VE
Sbjct: 732 YCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIAST 791
Query: 490 --------------------KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
+L ++M +TP+ V+YT +I + + + E
Sbjct: 792 PAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFME 851
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ + + ++ ++++ + E+ L +M + G K D+ A + + DA L
Sbjct: 852 MQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDL----AWSVMVDAHL 907
Query: 590 QMQAQWLQ 597
+ + W++
Sbjct: 908 K-EGNWIK 914
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 165/361 (45%), Gaps = 4/361 (1%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
M G++ D + ++ K G ++ +F E + L F+ Y L +L K
Sbjct: 608 MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFT---YTSLISNLCK 664
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
G A + DM +KGI + Y +LI + E+ A ELF EKG+ R+
Sbjct: 665 EGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVT 724
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
++ Y + + + + MK + + CA+++G K A+ ++ ++
Sbjct: 725 YSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMV 784
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+G I + ++I+ + ++ +A ++ +M V Y+ ++ + G I+
Sbjct: 785 EEG-IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIK 843
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+A L +M+ + PNV Y SL+ + R ++ L+ EM R + PD ++++ ++
Sbjct: 844 EAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMV 903
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
A+ + + +K ++ G + + + I++ K + + E++K+L +++ +G+K
Sbjct: 904 DAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSK 963
Query: 572 L 572
L
Sbjct: 964 L 964
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 200/445 (44%), Gaps = 10/445 (2%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTI 206
++PD +T + L+ + R K + +L G I L+ ++ + G + +
Sbjct: 228 IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEAL 287
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
+ M + G++ D+ Y +++ + + S + ++ E + L + Y L
Sbjct: 288 ELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVA---YTALI 344
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ K A + +M + I + Y +LI I +++ AE+LF E G+
Sbjct: 345 NGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIK 404
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D + L+ Y + +EK +++ +K L + + AIVNG A ++
Sbjct: 405 PDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANEL 464
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
++++IS G P V Y +I+ + + +A K+ M+ +G V Y++++ + K
Sbjct: 465 FQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCK 524
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G++ + + +M AKG +PNV+ Y + + + RA ++ E+ + EM + P+ V
Sbjct: 525 AGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVI 584
Query: 507 YTTVISAYNRAREFDMCVKFYNEFR--MNGGVI-DRAIAGIMVGVFSKLSQIEELVKLLQ 563
T +I Y + K + +FR ++ GV+ D +++ SK +++E + +
Sbjct: 585 CTDLIDGYCKDGN---TTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFS 641
Query: 564 DMKSEGTKLDERLYHSAMNALRDAG 588
++ +G D Y S ++ L G
Sbjct: 642 ELLDKGLVPDVFTYTSLISNLCKEG 666
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 167/392 (42%), Gaps = 15/392 (3%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
Q +PD + +HG+ K+ + QE A ++E P+ T LI L +
Sbjct: 611 QGVLPDVQTHSVLIHGLSKNGKLQE-AMGVFSELLD-KGLVPDVFTYTSLISNLCKEGDL 668
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSA- 192
+ L +D + P+ T + L+ + + A L G LA NS
Sbjct: 669 KAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKG----LARNSVT 724
Query: 193 ----MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+ GY K ++ MK G+ DS YC +++ K G++EK +LFL
Sbjct: 725 YSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMV 784
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ STP + L D K G+ EA + DM + I + Y LI ++
Sbjct: 785 EEGIASTP----AFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVG 840
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+K AE+LF E +++ ++ + L+ Y G + + + M +K D
Sbjct: 841 NIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWS 900
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+V+ K + A+K+ + ++S+G + Y +I+A C+ S+ KV E++++
Sbjct: 901 VMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQ 960
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
G + ++V + + GR +A+ ++ M
Sbjct: 961 GSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 170/397 (42%), Gaps = 43/397 (10%)
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
N++ +++ VY+ M A IV D Y ++ AY ++G E+ + + + +
Sbjct: 212 NRVELFWK---VYKGMLGA-IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNL 267
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y ++ L ++G EAL+ R M KG+L D IYA+LI F
Sbjct: 268 VT---YSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQK-------- 316
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ E K ML + M LK A++NGF K
Sbjct: 317 -RSTEGKSML--------------------------DEMYTMGLKPDHVAYTALINGFVK 349
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A +V E++ ++ TY ++I+ C+I KAE +F EM G +
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y+ ++ Y K + A L+ ++K + N ++ ++++ +L + +L++EM
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ P+ V YTT++ + F+ +K + G D ++ F K ++E
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKME 529
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
E L +M ++G K + Y + ++ AG +MQA
Sbjct: 530 EGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAG-EMQA 565
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/527 (19%), Positives = 207/527 (39%), Gaps = 44/527 (8%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VPD + + ++ + + +E + ++ +K P T ++I L ++ D
Sbjct: 229 VPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEK--GCIPNLVTYSVVIAGLCRAGDVDEA 286
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+ L +LPD + + L+ R ++ ++L T G + +A+ + + G
Sbjct: 287 LELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALING 346
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K V E+M + I L++ Y ++ KIGD EK L
Sbjct: 347 FVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDL------------ 394
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
F +M GI D Y LI + + ++ A E
Sbjct: 395 --------------------------FSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYE 428
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L E +++ + + +C +V G + + ++ + M + LK + I IV G
Sbjct: 429 LLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLV 488
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K + A+K+ + QG P Y ++I +C+ + + +EM KG V
Sbjct: 489 KEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVY 548
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y + + Y + G ++ A +M G PN I L+D + + N + ++ M
Sbjct: 549 TYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCM 608
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ V PD +++ +I ++ + + ++E G V D ++ K +
Sbjct: 609 LDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDL 668
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+ +L DM +G + Y++ +N L G +A+ L F+G
Sbjct: 669 KAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAREL---FDG 712
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 143/334 (42%), Gaps = 58/334 (17%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
EL+ D + P+ +++ ++G+ K E+A +A++L + PEK + +
Sbjct: 673 ELHDDMCKKGINPNIVTYNALINGLCK---LGEIA-----KARELFDGIPEKGLARNSVT 724
Query: 126 YLVQSKKWDSIVSLSEDFKIYN------VLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
Y + +L+E F++++ V PD+ L+ C +A + A +L +
Sbjct: 725 YSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMV 784
Query: 180 TDGEIALLAFNSAMGGYNKL---------------------HMYYSTILVYE-------- 210
+G + AFN+ + G+ KL H+ Y+ ++ Y
Sbjct: 785 EEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKE 844
Query: 211 ------KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKI 264
+M+ ++ + Y ++ Y +IG ++ +LF E +R + + + +
Sbjct: 845 AEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLA---WSV 901
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---CSFASITEVKLAEELFKEAE 321
+ D+ K G +ALK DM +G+ ++Y LI C +++EV ++ E E
Sbjct: 902 MVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVL---KVLDEVE 958
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
++G C LV + G ++ L V+ESM
Sbjct: 959 KQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/543 (22%), Positives = 235/543 (43%), Gaps = 24/543 (4%)
Query: 59 STNFPT-IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEK 117
S PT I+ NR +AV K++D L G K + + +D Y + + +K
Sbjct: 93 SRPLPTPIDFNR---LCSAVARTKQYDLVL-GFCKGMELNGIEHDMYTMTIMINCYCRKK 148
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQ 176
KLL + V + W PD T S LV C+ R + + +
Sbjct: 149 ---KLLFAFSVLGRAWK-----------LGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 194
Query: 177 VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
+ L+ ++ + G +++ ++M G D Y ++ K G+
Sbjct: 195 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 254
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
S LF + + R + + S Y I+ DSL K G +AL F +M+ KGI D
Sbjct: 255 SALALDLFRKMEERNIKA---SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 311
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y+SLI + + ++ +E + ++ D L+ ++++EG + + ++ M
Sbjct: 312 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 371
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ ++++GF K A ++++ ++S+GC P VTY+ +IN+YC+
Sbjct: 372 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 431
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
++F E+ KG + Y+++V + ++G++ A L +M ++G P+V Y L+
Sbjct: 432 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 491
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D L + +++++M++ ++T Y +I A + D + G
Sbjct: 492 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 551
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA-LRDAGLQMQAQW 595
D +M+G K + E L + MK +G D+ Y+ + A L +GL +
Sbjct: 552 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 611
Query: 596 LQQ 598
+++
Sbjct: 612 IEE 614
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/480 (20%), Positives = 202/480 (42%), Gaps = 18/480 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELA--YDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
PD F + ++G + + E D E K+ RP+ T+ LI L +
Sbjct: 167 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ----RPDLVTVSTLINGLCLKGRVSE 222
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMG 194
+ L + Y PD T ++ ++ +A L + + +++ ++ +
Sbjct: 223 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 282
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL-- 252
K + + ++ +M+ GI D Y ++ G + A + E R +
Sbjct: 283 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 342
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D FS L D K G+ EA + + +M +GI D Y SLI F +
Sbjct: 343 DVVTFSA-----LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 397
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A ++F KG +P++ +L+ Y + V+ + + + + L + +
Sbjct: 398 ANQMFDLMVSKGC--EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 455
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
V GF + AA +++++++S+G P VTY +++ C +KA ++F +MQ+
Sbjct: 456 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 515
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+ Y+ ++ ++ DA L + KG +P+V YN ++ + +L + +
Sbjct: 516 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 575
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L+++M+ TPD +Y +I A+ V+ E ++ G D + +++ + S
Sbjct: 576 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 635
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 146/333 (43%), Gaps = 1/333 (0%)
Query: 252 LDSTPFSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ S P T + + LC ++ ++ + L F + M+ GI D +I + ++
Sbjct: 91 IQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKL 150
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A + A + G D LV + EG V + + +V+ M K + +
Sbjct: 151 LFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTL 210
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+NG + A+ + ++++ G P +VTY ++N C+ + A +F +M+++
Sbjct: 211 INGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNI 270
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
VV YS ++ K G DA+ L +M+ KG + +V Y+SL+ K
Sbjct: 271 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 330
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
+ +EM R + PD V+++ +I + + + + YNE G D ++ F
Sbjct: 331 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 390
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
K + + E ++ M S+G + D Y +N+
Sbjct: 391 KENCLHEANQMFDLMVSKGCEPDIVTYSILINS 423
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 102/256 (39%), Gaps = 10/256 (3%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
EL + + PD ++S + G K+ E + K E P+ T +LI
Sbjct: 365 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE--PDIVTYSILIN 422
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EI 184
++K+ D + L + ++P+ T + LV ++ K A L Q ++ G
Sbjct: 423 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 482
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+++ + + G + ++EKM+ + + L G Y I+ + +LF
Sbjct: 483 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 542
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ + + Y ++ L K G EA FR MKE G D Y LI +
Sbjct: 543 CSLSDKGVKPDVVT---YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 599
Query: 305 AS----ITEVKLAEEL 316
I+ V+L EE+
Sbjct: 600 LGGSGLISSVELIEEM 615
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 202/450 (44%), Gaps = 7/450 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
PD+ T + ++ ++ + A LL+ + +G + ++N+ + G+ K + + + +
Sbjct: 42 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
E+M G D Y ++ K+ ++ + + R + Y L D
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVIT---YGTLVDG 158
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
+ G A++ R M E+G + Y +++ S ++ A +LFKE EE G
Sbjct: 159 FCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSC-P 217
Query: 329 PEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
P+V +V ++ G V+ +VE+M + + ++++G K A +
Sbjct: 218 PDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL 277
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+++ GC P VTY +II+ +C++ +A + EM G VV Y+ ++ + K
Sbjct: 278 LQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCK 337
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G+ DA+ LV M KG PN++ YNSL+DM + + + +L M ++ P+ VS
Sbjct: 338 CGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVS 397
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y TVI+ +A + V + N V D ++ K +++ +L ++
Sbjct: 398 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 457
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
G + Y+S ++ L + QA++L
Sbjct: 458 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYL 487
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 217/492 (44%), Gaps = 43/492 (8%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFK-IYNVLPDAHTCSRLVASCVRARKFKIA 171
+RP T ++ L +K DS + L ++ + + PD T S +V S V++ K A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
L++ ++ G ++ ++S + G K + ++M +G + Y I++
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
+ K+G ++ L E + Y +L D+ K G+A +A+ M EKG
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVT---YTVLLDAFCKCGKAEDAIGLVEVMVEKGY 356
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
+ + Y SL+ F EV+ A +L +KG C+ V+ Y
Sbjct: 357 VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG-------CVPNVVSYN---------- 399
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
++ G K V + EQ++S C+P VT+ +II+A C
Sbjct: 400 ------------------TVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC 441
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK-GCEPNV 469
+ A ++F +Q+ G +V Y+S+V K+ R A +L+ +M K GC P++
Sbjct: 442 KTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDI 501
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
YN+++D ++K + + KL+ +M + PD V+Y+ VIS+ + R D E
Sbjct: 502 ITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVL-E 560
Query: 530 FRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ G AI G ++ F K +++ +++LQ + S+G+ D + ++ L G
Sbjct: 561 LMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRG 620
Query: 589 LQMQAQWLQQNF 600
QA L +
Sbjct: 621 RLRQAGELLETM 632
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 120/547 (21%), Positives = 225/547 (41%), Gaps = 36/547 (6%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+EL R + P+A +++ +HG+ + A + E ++ P+ T ++
Sbjct: 169 VELVRKMTERGYRPNAITYNNIMHGLCSGRKLDS-ALQLFKEMEESGSCPPDVFTYSTIV 227
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-E 183
LV+S K D L E P+ T S L+ +A K A LLQ G
Sbjct: 228 DSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCS 287
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ +N+ + G+ KL + E+M G + Y +++A+ K G +E L
Sbjct: 288 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGL 347
Query: 244 F--------------------LECKSRKLD-STPFSTHM-----------YKILCDSLGK 271
+ CK +++ + + M Y + L K
Sbjct: 348 VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 407
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+ + E + M + D + ++I + V +A ELF +E G +
Sbjct: 408 ATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVT 467
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQL 390
LV + ++ ++ M + D I+ +++G K + A K++ Q+
Sbjct: 468 YNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 527
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+S G P VTY+ +I++ C+ +A V M + GFD + Y +++ + KTG +
Sbjct: 528 LSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNL 587
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
A+ ++ + +KG P+V ++ +D + LRQ +L + M R + PD V+Y T+
Sbjct: 588 DKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTL 647
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG-VFSKLSQIEELVKLLQDMKSEG 569
+ + A + V + R G D A +VG + K S + L ++ + M G
Sbjct: 648 LKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTG 707
Query: 570 TKLDERL 576
KL+ L
Sbjct: 708 FKLNHEL 714
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 36/244 (14%)
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+S+ C P VTY ++IN + A ++ EM GF V +Y++++ + K R+
Sbjct: 36 MSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRV 95
Query: 451 RDAMWLVA-----------------------------------KMKAKGCEPNVWIYNSL 475
+A+WL+ KM +GC+PNV Y +L
Sbjct: 96 ENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTL 155
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+D R +L +L ++M R P+ ++Y ++ R+ D ++ + E +G
Sbjct: 156 VDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGS 215
Query: 536 V-IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
D +V K ++++ +L++ M S+G + Y S ++ L AG +A
Sbjct: 216 CPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEAT 275
Query: 595 WLQQ 598
L Q
Sbjct: 276 ALLQ 279
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 128/557 (22%), Positives = 228/557 (40%), Gaps = 77/557 (13%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A +++ P ++ K T L+ V+ KK L ++ + PD+ T S L+
Sbjct: 115 AVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLI 174
Query: 160 ASCVRARKFKIA-------------------NTLLQVFITDGEIALLAFNSAMGGYNKLH 200
+AR F+ A NT+++ +G + +SA+ Y +
Sbjct: 175 NGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRV-----DSALVHYRDMQ 229
Query: 201 ------MYYSTILVYEKMKSAGI---------VLDSGC------YCQIMEAYYKIGDSEK 239
+ TILV KSA I ++++GC Y ++ + K+G+ ++
Sbjct: 230 RNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDE 289
Query: 240 VAALFLE--------------------CKS-RKLDSTPFSTHM-----------YKILCD 267
LF + CK R D M Y L D
Sbjct: 290 AVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMD 349
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
SL KSG+ +A + M + + +I F + ++ LA ELF+ ++G L
Sbjct: 350 SLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLP 409
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D ++ ++ ++E M A +IV+G K A +VY
Sbjct: 410 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 469
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
E L + G VT +++I+ C+ AEK+ EM++ G VVAY+ ++ + K
Sbjct: 470 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 529
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
++ ++ ++M KGC P V Y+ ++D ++ +R L K M R VTPD + Y
Sbjct: 530 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVY 589
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T+VI ++ +D + Y + G ++V K+S+++E + LL+ M+S
Sbjct: 590 TSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMES 649
Query: 568 EGTKLDERLYHSAMNAL 584
+G D Y+S +
Sbjct: 650 DGCLPDTVTYNSVFDGF 666
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 120/544 (22%), Positives = 226/544 (41%), Gaps = 44/544 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD+ + + ++G K Q+ AY +E +K P + +I+ L + + DS +
Sbjct: 165 PDSITYSTLINGFCKARDFQQ-AYRLLDEMEKR-GIVPHNAVYNTIIKGLCDNGRVDSAL 222
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
D + N P T + LV + ++ + A+ +L+ I G ++ +N+ + G+
Sbjct: 223 VHYRDMQ-RNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGF 281
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
KL ++++ +M D Y +++ Y K + A L E +
Sbjct: 282 CKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN- 340
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
F T Y L DSL KSG+ +A + M + + +I F + ++ LA EL
Sbjct: 341 FIT--YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYEL 398
Query: 317 FKEAEEKGMLRD----------------------------PEVCLKLVLMY--IEEGL-- 344
F+ ++G L D C V+ Y I GL
Sbjct: 399 FQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCK 458
Query: 345 ---VEKTLDVVESMKNAKLKISDCISCA-IVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
V++ +V E ++N + D ++C+ +++G K R A K+ ++ G P V
Sbjct: 459 ASQVDEAYEVYEVLRNGGYFL-DVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 517
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
Y +I+ +C+ K+ F EM KG V+ YS ++ K+ R+RD L+ M
Sbjct: 518 AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 577
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+G P+ +Y S++D ++ + + +L+K M++ P V+Y ++ +
Sbjct: 578 LERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRL 637
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
D + +G + D + F K ++ ++ +L Q MKS G +Y
Sbjct: 638 DEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLL 697
Query: 581 MNAL 584
+ L
Sbjct: 698 LTKL 701
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 176/444 (39%), Gaps = 76/444 (17%)
Query: 102 DYYNEAKKL--PEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
D +N A+ + + +P T L+I + + D L + LPD +T + ++
Sbjct: 359 DAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMI 418
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
+ RA + A LL+ G ++ +NS + G K VYE +++ G
Sbjct: 419 SGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYF 478
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
LD +++ CKSR+LD +A
Sbjct: 479 LDVVTCSTLIDGL---------------CKSRRLD-----------------------DA 500
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
K R+M+ G D Y LI F ++ + F E +KG C+ V+
Sbjct: 501 EKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG-------CVPTVIT 553
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
Y S+ KL C S + +G + + ++ +G P
Sbjct: 554 Y--------------SIVIDKL----CKSARVRDG----------CMLLKTMLERGVTPD 585
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+ Y S+I+ C+ Y +A +++ M+Q G VV Y+ +V K R+ +A+ L+
Sbjct: 586 AIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLE 645
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
M++ GC P+ YNS+ D ++ + +L++ M+ R +P Y+ +++
Sbjct: 646 VMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEE 705
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIA 542
+ D ++ + E G +D I+
Sbjct: 706 KMDQAMEIWEEALEAGADVDPEIS 729
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 111/229 (48%), Gaps = 1/229 (0%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++ F +++ A +++ C P +TY+++IN +C+ + +A ++ EM+++G
Sbjct: 138 LLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 197
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
Y++++ GR+ A+ M+ + C P+V Y L+D ++ +
Sbjct: 198 IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RNCAPSVITYTILVDALCKSARISDAS 256
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+ ++M P+ V+Y T+I+ + + D V +N+ N D I++ +
Sbjct: 257 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 316
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
K + ++ KLLQ+M G + + Y++ M++L +G + A L Q
Sbjct: 317 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQ 365
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 72/164 (43%), Gaps = 5/164 (3%)
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
Q G+ + +++ + + + ++A L + C P+ Y++L++ +A++ +
Sbjct: 125 QPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQ 184
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN--GGVIDRAIAGI 544
Q +L EME+R + P Y T+I D + Y + + N VI I
Sbjct: 185 QAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYT---I 241
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+V K ++I + +L+DM G + Y++ +N G
Sbjct: 242 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLG 285
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 98/236 (41%), Gaps = 6/236 (2%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
+L R+ + PD + +HG K Q + + +++E P T ++I
Sbjct: 502 KLLREMERNGSAPDVVAYTILIHGFCKADQLDK-SLAFFSEMLD-KGCVPTVITYSIVID 559
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EI 184
L +S + L + V PDA + ++ ++ + A L ++ G
Sbjct: 560 KLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAP 619
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
++ +N + K+ I + E M+S G + D+ Y + + ++K + +K LF
Sbjct: 620 TVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLF 679
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
KSR TPF MY +L L + +A++ + + E G DP I +L
Sbjct: 680 QAMKSRGCSPTPF---MYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTL 732
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 222/496 (44%), Gaps = 10/496 (2%)
Query: 95 QTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHT 154
Q EL YD+ + +LP F +++++ LV+SKK+D+++ L ++ PD
Sbjct: 14 QVSEL-YDFMRQEGRLPSF----GYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLV 68
Query: 155 CSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMK 213
R + + V+ K+A L + + + +N +GG K ++ +M
Sbjct: 69 YGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMS 128
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
+V + + +++ Y K G+ + L K K++ + + + L L K+
Sbjct: 129 VRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIIT---FNSLLSGLCKAR 185
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSF-ASITEVKLAEELFKEAEEKGMLRDPEVC 332
R EA ++K G + D Y+ + S A +L++EA KG+ D C
Sbjct: 186 RIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTC 245
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
L+ +EG VEK +V++S+ L + I IVNG+ + A+ EQ+ S
Sbjct: 246 SILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMES 305
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
+G P + + S+I+ +C + + KAE+ +M KG V Y+ ++ YG+
Sbjct: 306 RGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSR 365
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
++ +M+ G +PNV Y SL++ + + + E + ++M R V P+ Y +I
Sbjct: 366 CFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLID 425
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ ++F++E NG ++ K+ +++E ++ + S G
Sbjct: 426 GSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCP 485
Query: 573 DERLYHSAMNALRDAG 588
D Y+S ++ +AG
Sbjct: 486 DVITYNSLISGYSNAG 501
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/524 (20%), Positives = 217/524 (41%), Gaps = 22/524 (4%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+EL + VP+ ++ + G+ K+ + ++ A + E + P + T LI
Sbjct: 86 MELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRD-AEKLFGEMS-VRNLVPNRVTFNTLI 143
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQ-----VFI 179
++ + D + L E K V P T + L++ +AR+ + A +L F+
Sbjct: 144 DGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFV 203
Query: 180 TDGEIALLAFNSAM----GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG 235
DG + F+ + G L +Y I G+ +D+ ++ K G
Sbjct: 204 PDGFTYSIIFDGLLKSDDGAGAALDLYREAI-------GKGVKIDNYTCSILLNGLCKEG 256
Query: 236 DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
EK + L P +Y + + + G A+ M+ +G+ +
Sbjct: 257 KVEKAEEVLKSLVEHGL--VPGEV-IYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCI 313
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
+ S+I F + + AEE K+ KG+ E L+ Y + + ++E M
Sbjct: 314 AFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEM 373
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+ K + +++N K A V ++ +G +P Y +I+ C +
Sbjct: 374 EENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKL 433
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+A + F EM + G +V Y+S++ K G++++A + + + G P+V YNSL
Sbjct: 434 REALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSL 493
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ + A N ++ +L++ M++ + P ++ +IS ++ + +NE
Sbjct: 494 ISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSK-EGIKLKETLFNEMLQMNL 552
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
DR + M+ + + +++ L ++M G + D + Y+S
Sbjct: 553 SPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNS 596
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 115/527 (21%), Positives = 225/527 (42%), Gaps = 39/527 (7%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW-DSI 136
P F+S L G+ K + +E A NE K F P+ T ++ L++S +
Sbjct: 169 PSIITFNSLLSGLCKARRIEE-ARCMLNEIK-CNGFVPDGFTYSIIFDGLLKSDDGAGAA 226
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGG 195
+ L + V D +TCS L+ + K + A +L+ + G + + +N+ + G
Sbjct: 227 LDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNG 286
Query: 196 YNKLHMYYSTILVYEKMKSAGI---------VLDSGCYCQIM------------------ 228
Y ++ IL E+M+S G+ V+D C Q++
Sbjct: 287 YCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPS 346
Query: 229 -EAYYKIGDSEKVAALFLEC----KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
E Y + D +F C + + + + Y L + L K G+ EA R
Sbjct: 347 VETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLR 406
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
DM +G+L + +IY LI ++ +++ A F E + G+ L+ + G
Sbjct: 407 DMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMG 466
Query: 344 LVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
+++ ++ + + D I+ ++++G+S +++YE + G P T+
Sbjct: 467 KLKEAEEMFFLITSTG-HCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTF 525
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+I+ + + K E +F EM Q V Y++M+ Y +TG ++ A L +M
Sbjct: 526 HPLISGCSKEGIKLK-ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVD 584
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
G P+ YNSL+ H + L + + L +M+ + + P+ +Y+ +I + ++F+
Sbjct: 585 MGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNG 644
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+Y E NG + + I + K +++E + +M + G
Sbjct: 645 AYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANG 691
>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
Length = 546
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 233/481 (48%), Gaps = 16/481 (3%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
+ P ++++ ++++++W+ L + +++PD T S L++ RA + + A
Sbjct: 21 YAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDAM 80
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
LQ G + L+ F++ + K+ Y ++ K+K++GI D Y ++ Y
Sbjct: 81 GWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLY 140
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K ++ L E K L S Y IL ++ +S + EA + F +MK KGI
Sbjct: 141 GKAKFYKEAQGLLAEMKEAGLMPDTVS---YTILINAYAESQKYLEAKQVFLEMKTKGIQ 197
Query: 292 EDPSIYASLICSFASITEVKLAEELF-KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
D + +I + + V+ AEELF ++ G+ ++ ++ +Y E L+ + +
Sbjct: 198 LDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFN 257
Query: 351 VVESMKNAKLKISDCIS---CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
V M+N + I+ ++G + + + A+++ ++ +G P VTY+++I+
Sbjct: 258 VFYYMQNKGGVEPNVITYNTILFLHGLTLQ--HEKAMRLVRKMQQRGIEPNAVTYSTLIS 315
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
Y + Y +A +F +++KGF+ + Y SM+ +Y + G + A L+ ++K +P
Sbjct: 316 IYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELK----QP 371
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKL-WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
++ ++ + + +A+ L + KL W+ E ++ + V+Y ++I + R + +
Sbjct: 372 DIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEI-KESVTYKSMIQLFMRNKRSKNAIDV 430
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ R +G + D +++ + +L Q+E+ KL DM+ G L++ ++ + D
Sbjct: 431 FENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGD 490
Query: 587 A 587
A
Sbjct: 491 A 491
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 111/206 (53%), Gaps = 1/206 (0%)
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+++ + +P + T++++I+ Y R A EM+ G +V +S+++ + GK
Sbjct: 50 EMVEKDLVPDKFTFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVK 109
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
A L +K+KA G P+ IYNS+++++G+AK ++ + L EM+ + PD VSYT
Sbjct: 110 DYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYT 169
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM-KS 567
+I+AY ++++ + + E + G +D +M+ V+ KL + + +L M K+
Sbjct: 170 ILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKT 229
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQA 593
G + + Y++ + ++A L +A
Sbjct: 230 LGIQQNVVTYNTMIKVYKEAELLSEA 255
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 147/342 (42%), Gaps = 39/342 (11%)
Query: 294 PSIYA--SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
PSI+A ++ + + +LAE L E EK ++ D L+ Y +E +
Sbjct: 23 PSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDAMGW 82
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++ M+ +K I ++ K + Y A ++ +L + G P +V Y S+IN Y +
Sbjct: 83 LQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGK 142
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
Y +A+ + EM++ G V+Y+ ++ Y ++ + +A + +MK KG + +V
Sbjct: 143 AKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTT 202
Query: 472 YNSLMDMHGRAKNLRQVEKL-WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
N ++D++G+ + +R E+L W + + + V+Y T+I Y A +
Sbjct: 203 CNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYM 262
Query: 531 RMNGGVIDRAIA---------------------------GI---------MVGVFSKLSQ 554
+ GGV I GI ++ ++ K +
Sbjct: 263 QNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGK 322
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ L + ++ +G ++DE LY S + AGL A+ L
Sbjct: 323 YDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRL 364
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 96/180 (53%)
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G P Y ++ R + AE + +EM +K +S++++ YG+ R+ DA
Sbjct: 20 GYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDA 79
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
M + +M+A G +P++ I+++L+++ G+ K+ + L+ +++ + PDKV Y ++I+
Sbjct: 80 MGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINL 139
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
Y +A+ + E + G + D I++ +++ + E ++ +MK++G +LD
Sbjct: 140 YGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLD 199
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/489 (20%), Positives = 202/489 (41%), Gaps = 69/489 (14%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VPD F + + G + + ++ A + E + +P+ LI + K +
Sbjct: 57 VPDKFTFSTLISGYGRANRLED-AMGWLQEMEA-GGIKPDLVIFSTLIELAGKVKDYSKA 114
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
SL K + PD + ++ +A+ +K A LL G + +++ +
Sbjct: 115 TSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINA 174
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC-------- 247
Y + Y V+ +MK+ GI LD +++ Y K+ LF
Sbjct: 175 YAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQ 234
Query: 248 ------------KSRKLDSTPFSTHMYK----------ILCDSL----GKSGRAFEALKF 281
K +L S F+ Y I +++ G + + +A++
Sbjct: 235 NVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRL 294
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
R M+++GI + Y++LI + + A LFK EKG D + ++++Y
Sbjct: 295 VRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYER 354
Query: 342 EGLVEKTLDVVESMKN----------------------AKL--------KISDCISC-AI 370
GLV ++E +K AKL +I + ++ ++
Sbjct: 355 AGLVAHAKRLLEELKQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSM 414
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+ F + + A+ V+E + G +P T ++ AY ++ AEK++++M+++G
Sbjct: 415 IQLFMRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGC 474
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+ M+ +YG +IR+A + A +K +G + + +Y +++ ++ RA L + +
Sbjct: 475 TLEKEVHFQMLKLYGDARKIREAEDMFAALKLEGLDGDE-LYLTMIRIYERASKLNEASR 533
Query: 491 LWKEMERRK 499
L+ EM+ R+
Sbjct: 534 LFSEMKSRQ 542
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
W++ K G P+++ YN ++ RA+ E L EM + + PDK +++T+IS Y
Sbjct: 14 WMIEK---GGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGY 70
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
RA + + + E G D I ++ + K+ + L +K+ G D+
Sbjct: 71 GRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDK 130
Query: 575 RLYHSAMNALRDAGLQMQAQWL 596
+Y+S +N A +AQ L
Sbjct: 131 VIYNSMINLYGKAKFYKEAQGL 152
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 82/170 (48%)
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+++ G+ + AY+ ++ + + A LV +M K P+ + +++L+ +GRA
Sbjct: 16 IEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANR 75
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
L +EME + PD V ++T+I + +++ +++ + +G D+ I
Sbjct: 76 LEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNS 135
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
M+ ++ K +E LL +MK G D Y +NA ++ ++A+
Sbjct: 136 MINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAK 185
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 205/451 (45%), Gaps = 5/451 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILV 208
P+ T S L+ +++ A L+ Q+F+T + + FN+ + G + + +
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVAL 208
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
++M + G D Y ++ K GD++ L + + KL+ +Y + D
Sbjct: 209 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEP---GVLIYTTIIDG 265
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L K+ +AL F++M+ KGI + Y+SLI + A L + E+ + D
Sbjct: 266 LCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ +++EG + + + + M + S +++NGF A +++E
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++S+ C P V+Y+++I +C+ + ++F EM Q+G V Y++++ + G
Sbjct: 386 FMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAG 445
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
A + +M + G PN+ YN+L+D + L + +++ ++R K+ P +Y
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I +A + + + + G D M+ F + EE L ++MK +
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 569 GTKLDERLYHSAMNA-LRDAGLQMQAQWLQQ 598
GT + Y++ + A LRD + A+ +++
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 189/441 (42%), Gaps = 10/441 (2%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
++P T LI L K V+L + PD T +V + +A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 173 TLLQVFITDG--EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
LL + G E +L + + + G K + ++++M++ GI + Y ++
Sbjct: 242 ILLNK-MEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
G + L + RK++ F+ + L D+ K G+ EA K + +M ++ I
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFT---FSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 291 LEDPSI--YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
DPSI Y+SLI F + A+++F+ K D L+ + + V++
Sbjct: 358 --DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEG 415
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+++ M L + ++ G + A +++++++S G P +TY ++++
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
C+ KA VF +Q+ + + Y+ M+ K G++ D L + KG +P+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
V YN+++ R + + + L+KEM+ P+ Y T+I A R + + +
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 529 EFRMNGGVIDRAIAGIMVGVF 549
E R G D + G++ +
Sbjct: 596 EMRSCGFAGDASTIGLVTNML 616
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 108/244 (44%)
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
E M+N + + ++N F +R A+ V +++ G P VT +S++N YC
Sbjct: 105 EQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
S+A + +M G+ V +++++ + +A+ L+ +M AKGC+P++ Y
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTY 224
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+++ + + L +ME+ K+ P + YTT+I + + D + + E
Sbjct: 225 GVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMET 284
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
G + ++ + + +LL DM D + + ++A G ++
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 593 AQWL 596
A+ L
Sbjct: 345 AEKL 348
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 89/205 (43%), Gaps = 6/205 (2%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
AV ++ +++ P + ++ +++A ++ + + +MQ G YS ++
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILIN 124
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ + ++ A+ ++ KM G EPN+ +SL++ + +K + + L +M P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 503 DKVSYTTVISA---YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ V++ T+I +N+A E V + G D G++V K +
Sbjct: 185 NTVTFNTLIHGLFLHNKASE---AVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 560 KLLQDMKSEGTKLDERLYHSAMNAL 584
LL M+ + +Y + ++ L
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGL 266
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 182/375 (48%), Gaps = 3/375 (0%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+++ G+ L++ CY ++++Y + + + VA L E ++R ++ T Y IL D L
Sbjct: 172 DELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPT---VGTYTILVDGL 228
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
++G + + +MK K + D Y+++I ++ V+ A E+F E G+ +
Sbjct: 229 SRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNE 288
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
L+ + + G +E ++ M+ + + + +++G+ + A+++
Sbjct: 289 RTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAV 348
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ G TY ++ CR+ A+K+ M +KG V+Y+++++++ K G
Sbjct: 349 MEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGD 408
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ +A L M+ KG P+V YN ++D + + ++R+ E+ KEME++ + PD +Y
Sbjct: 409 MVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAG 468
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
++ + + D+ ++ + E + G + +V +K + EE +L DM + G
Sbjct: 469 LVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAG 528
Query: 570 TKLDERLYHSAMNAL 584
D+ LY + +L
Sbjct: 529 LTPDDTLYSVLVGSL 543
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 172/372 (46%), Gaps = 3/372 (0%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+NS + Y + + + ++M++ G+ G Y +++ + GD KV A++ E K
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMK 245
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ + + Y + ++ + G A + F + G+ + Y +LI F I
Sbjct: 246 RKNVAG---DVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIG 302
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+++ AE L + + +G+ + V ++ Y G+VEK L++ M+ +++
Sbjct: 303 QIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYN 362
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+ G + A K+ + +G P V+Y ++I+ + + +A ++F +M+ K
Sbjct: 363 TLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGK 422
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G VV Y+ M+ Y K G IR+A +M+ KG P+++ Y L+ H +
Sbjct: 423 GSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVA 482
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+L++EM+ R P+ V+YT ++S + + + Y++ G D + ++VG
Sbjct: 483 LRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGS 542
Query: 549 FSKLSQIEELVK 560
S+ + L +
Sbjct: 543 LHTDSRKDPLPR 554
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 5/209 (2%)
Query: 397 PGQVTYAS---IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
P VT S +++ +C+ A + E+ + G Y+S++ Y + R DA
Sbjct: 143 PASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQ-RNDDA 201
Query: 454 M-WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
+ L+ +M+ +G EP V Y L+D RA ++ +VE ++ EM+R+ V D Y+ VI+
Sbjct: 202 VAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVIN 261
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
AY R + ++E +G + G ++ F K+ QIE LL DM+ G
Sbjct: 262 AYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGH 321
Query: 573 DERLYHSAMNALRDAGLQMQAQWLQQNFE 601
++ ++++ ++ G+ +A ++ E
Sbjct: 322 NQIVFNTMIDGYCRHGMVEKALEIKAVME 350
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 137/347 (39%), Gaps = 38/347 (10%)
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
TP S ++ D KSG +A ++ G+ + Y SL+ S+
Sbjct: 147 TPLSA---SVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVA 203
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
L KE E +G+ +P V +L V+G
Sbjct: 204 GLLKEMENRGV--EPTVGTYTIL---------------------------------VDGL 228
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
S+ VY+++ + Y+++INAYCR +A +VF E G +
Sbjct: 229 SRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNE 288
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
Y +++ + K G+I A L+A M+ +G N ++N+++D + R + + ++
Sbjct: 289 RTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAV 348
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
ME+ + D +Y T+ R + K + G + ++ + +K
Sbjct: 349 MEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGD 408
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ E +L +DM+ +G++ Y+ ++ G +A+ ++ E
Sbjct: 409 MVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEME 455
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 3/222 (1%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ FN+ + GY + M + + M+ GI LD Y + ++ E L
Sbjct: 324 IVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHI 383
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+ + S Y L K G EA + FRDM+ KG Y +I +
Sbjct: 384 MAEKGVAPNYVS---YTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIK 440
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
++ AE KE E+KG++ D LV + G V+ L + E MK+ K +
Sbjct: 441 NGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVA 500
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
A+V+G +K A ++Y+ +++ G P Y+ ++ +
Sbjct: 501 YTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGS 542
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/536 (22%), Positives = 229/536 (42%), Gaps = 16/536 (2%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I+L D +P F L G++ + +L Y + ++ + R + + +LI
Sbjct: 64 IDLFSDMLRSRPLPSVVDF-CKLMGVVVRMERPDLVISLYQKMER-KQIRCDIYSFTILI 121
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGE 183
+ K +S + PD T + L+ CV R + N Q+F T
Sbjct: 122 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCR 181
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ F + M G + + + ++M G+ Y I++ K GD+ V+AL
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT--VSAL 239
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
L K ++ + +Y + DSL K GR +A F +M+EKGI D Y S+I
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
F S AE+L +E E+ + D L+ +++EG + ++ + M + +
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
++++GF K+ AA ++ + ++GC P +T+ ++I+ YC ++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM + G Y++++ + G + A+ L+ +M + G P++ ++L+D
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 484 NLRQVEKLWKEMERRK-----------VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
L+ +++K M++ K V PD +Y +IS +F + Y E
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G V D M+ K S+++E ++ M S+ + + + +N AG
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/469 (18%), Positives = 206/469 (43%), Gaps = 18/469 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + + + GM K T A + + +++ P +I L + +
Sbjct: 217 PTQITYGTIVDGMCKKGDTVS-ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGG 195
+L + + + PD T + ++ + ++ A LLQ + + +I+ ++ +N+ +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML-ERKISPDVVTYNALINA 334
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K ++ +Y++M GI+ ++ Y +++ + K + +F ++
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ + L D + R + ++ +M E G++ D + Y +LI F + ++ A +
Sbjct: 395 LIT---FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK--LKISDCISCA---- 369
L +E G+ D C L+ + G ++ L++ + M+ +K L S +
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 370 -----IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++G + A ++YE++ +G +P +TY+S+I+ C+ + +A ++F
Sbjct: 512 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M K F VV +++++ Y K GR+ D + L +M +G N Y +L+ + N
Sbjct: 572 MGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+ +++EM V PD ++ +++ E V + +M+
Sbjct: 632 INGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/520 (20%), Positives = 215/520 (41%), Gaps = 18/520 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F++ LHG+ + + E A + +++ + RP T L+ L + + V
Sbjct: 147 PDVVTFNTLLHGLCVEDRVSE-ALNLFHQMFE-TTCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 138 SLSEDFKIYNVLPDAHTCSRLV-ASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
+L + + P T +V C + N L ++ I ++ +++ +
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K + ++ +M+ GI D Y ++ + G L E RK+
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y L ++ K G+ FEA + + +M +GI+ + Y+S+I F + AE
Sbjct: 325 VVT---YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F KG + L+ Y ++ ++++ M L +++GF
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ-------- 427
AA+ + +++IS G P VT ++++ C A ++F MQ+
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 428 ---KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
G + V Y+ +++ G+ +A L +M +G P+ Y+S++D +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
L + +++ M + +P+ V++TT+I+ Y +A D ++ + E G V +
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ F K+ I + + Q+M S G D + + L
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 109/506 (21%), Positives = 204/506 (40%), Gaps = 65/506 (12%)
Query: 114 RPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
RP S + L+ +V+ ++ D ++SL + + + D ++ + L+ K A
Sbjct: 74 RPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFA 133
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKL-HMYYSTILVYEKMKSAGIVLDSGC------Y 224
L F G++ L + + +N L H V E + + ++ C +
Sbjct: 134 ---LSTF---GKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF 187
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
+M + G + AL L T + Y + D + K G AL R
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT---YGTIVDGMCKKGDTVSALNLLRK 244
Query: 285 MKE-KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
M+E I+ + IY+++I S A+ LF E +EKG+ D
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD--------------- 289
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
L SM + GF + A ++ ++++ + P VTY
Sbjct: 290 -----LFTYNSM---------------IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
++INA+ + + +AE+++ EM +G + YSSM+ + K R+ A + M K
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
GC PN+ +N+L+D + AK + +L EM + D +Y T+I + + +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVF---SKLSQIEELVKLLQDMKSE--------GTKL 572
+ E +G D ++ KL E+ K++Q K + G +
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 573 DERLYHSAMNALRDAGLQMQAQWLQQ 598
D + Y+ ++ L + G ++A+ L +
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYE 535
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 43/233 (18%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
S + +GF + +G A+ ++ ++ +P V + ++ R+ ++ +M+
Sbjct: 47 SLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKME 106
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+K + +++ ++ + ++ A+ K+ G P+V +N+L +HG R
Sbjct: 107 RKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTL--LHGLCVEDR 164
Query: 487 QVE--KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
E L+ +M P+ V++TT+++ R V + +G + G
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA-MNALRDAGLQMQAQWL 596
+V K + LL+ M+ + + +SA +++L G AQ L
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 194/434 (44%), Gaps = 10/434 (2%)
Query: 156 SRLVASCVRARKFKIANTLLQVF---ITDGEIAL--LAFNSAMGGYNKLHMYYSTILVYE 210
S ++ S R K I LLQ I +I L L N + G+ K +
Sbjct: 248 SLIIQSLTRTNKIDIP--LLQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLS 305
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
++++G+ + + ++ A G +E+ A+F E K L + L
Sbjct: 306 MVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKP---RIKAFNALLKGYA 362
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
+ G EA +M++ G+ D Y L+ ++A++ + A L K+ E + + +
Sbjct: 363 RKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTF 422
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
+ +++ Y + G +KT +V+ MKN+ +K +++ F K A++ Y+++
Sbjct: 423 IFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRM 482
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+S+G P VT+ ++I+ + + + +A ++F EMQ++G+ C Y+ M+ G+ +
Sbjct: 483 LSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKW 542
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
+ L+ KM+++G PNV Y +L+D++G + + M+ + P Y +
Sbjct: 543 DEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNAL 602
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
I+A+ + + V Y +G ++ F + + E +LQ MK
Sbjct: 603 INAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDV 662
Query: 571 KLDERLYHSAMNAL 584
K D Y + M AL
Sbjct: 663 KPDVVTYTTLMKAL 676
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/453 (20%), Positives = 196/453 (43%), Gaps = 10/453 (2%)
Query: 154 TCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTIL--VYE 210
T + L+ +C R + A L+ DG + + ++ + + + +L +YE
Sbjct: 211 TYNALIGACARNNDLEKALNLMSRMRQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYE 270
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
+++S I LD I+ + K GD + ++ L+ T + + +LG
Sbjct: 271 EIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNP---KTSTFVAVISALG 327
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
GR EA F +MKE G+ + +L+ +A +K AE + E E+ G+ D
Sbjct: 328 NHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEH 387
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
LV Y G E +++ M+ ++ + I I+ + R + +V ++
Sbjct: 388 TYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREM 447
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+ P + Y +I+ + + A + + M +G + VV +++++ + K G
Sbjct: 448 KNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYH 507
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
A L +M+ +G P YN +++ G + +V+ L +M+ + + P+ V+YTT+
Sbjct: 508 DRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTL 567
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
+ Y + F+ + + G + ++ F++ E+ V + M S+G
Sbjct: 568 VDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGL 627
Query: 571 KLDERLYHSAMNALRDAGLQMQA----QWLQQN 599
+ +S +NA + ++A Q++++N
Sbjct: 628 RPSLLALNSLINAFGEDRRDIEAFSILQYMKEN 660
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 158/342 (46%), Gaps = 15/342 (4%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y IL +LG+S + +EA + +K L P Y +LI + A +++ A L
Sbjct: 181 LYSILIHALGRSEKLYEAFI----LSQKQTLT-PLTYNALIGACARNNDLEKALNLMSRM 235
Query: 321 EEKGMLRDPEVCLKLVLMY------IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
+ G D + L++ I+ L++K + +ES K+++ + I+ GF
Sbjct: 236 RQDGFQSD-FINYSLIIQSLTRTNKIDIPLLQKLYEEIES---DKIELDGLLLNDIILGF 291
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+K A+ + + G P T+ ++I+A +AE +F EM++ G +
Sbjct: 292 AKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRI 351
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
A+++++ Y + G +++A ++++M+ G P+ Y L+D + L K+
Sbjct: 352 KAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQ 411
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
ME R V P+ ++ ++++Y E+ + E + + DR +M+ F K +
Sbjct: 412 MEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNC 471
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ ++ M SEG + D +++ ++ R G +A L
Sbjct: 472 LDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAEL 513
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 149/352 (42%), Gaps = 5/352 (1%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
AFN+ + GY + + +M+ +G+ D Y +++AY +G E L +
Sbjct: 353 AFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQM 412
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
++R + F ++ + S G + + R+MK + D Y +I +F
Sbjct: 413 EARNVQPNTF---IFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKF 469
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+ A E + +G+ D L+ + + G ++ ++ E M+
Sbjct: 470 NCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTY 529
Query: 368 CAIVNGFSKRRGYWAAVKVY-EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
++N ++ W VK+ ++ SQG +P VTY ++++ Y ++ A M+
Sbjct: 530 NIMINSLGEQEK-WDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMK 588
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
G Y++++ + + G A+ M + G P++ NSL++ G +
Sbjct: 589 SAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDI 648
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ + + M+ V PD V+YTT++ A R +FD Y E ++G D
Sbjct: 649 EAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPD 700
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 147/339 (43%), Gaps = 7/339 (2%)
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAF 189
K+ +SI+S + + + PD HT LV + +++ A LL Q+ + + F
Sbjct: 368 KEAESIIS---EMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIF 424
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
+ + Y + T V +MK++ + D Y +++ + K + + S
Sbjct: 425 SRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLS 484
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
++ + + L D K G A + F +M+E+G L P+ Y +I S +
Sbjct: 485 EGIEPDVVT---WNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEK 541
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
+ L + + +G+L + LV +Y G +D +E+MK+A LK S + A
Sbjct: 542 WDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNA 601
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++N F++R AV Y +IS G P + S+INA+ +A + M++
Sbjct: 602 LINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKEND 661
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
VV Y++++ + + + +M GC P+
Sbjct: 662 VKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPD 700
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/467 (20%), Positives = 197/467 (42%), Gaps = 8/467 (1%)
Query: 77 VPDAKKFDSFLHGML--KDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
+PD + L +L +DP + + ++ P+ LI ++ D
Sbjct: 194 LPDLASYSHLLASLLNTRDPPDAAILERLLGDLRE-SRLEPDAPLFSDLISAFARAALPD 252
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSA 192
+ + L + + P ++ + L+++ A + A L F GEI A+N+
Sbjct: 253 AALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNAL 312
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY K+ + V ++M G+ D Y +++AY + G E L E ++
Sbjct: 313 LKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEA--- 369
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D S++++ + G +A R+M G+ D Y +I +F +
Sbjct: 370 DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGH 429
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A + F E+G+ D L+ + + G ++ +++ E M+ + ++N
Sbjct: 430 AMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMIN 489
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
++ + + ++ QG +P +TY ++++ Y R + +A + M+ G
Sbjct: 490 LLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKP 549
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
Y ++V Y + G A+ +V M+A G E + + NSLM+ G + + + +
Sbjct: 550 SPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVL 609
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+ M+ + PD ++YTT++ A R +FD Y E +G DR
Sbjct: 610 QFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAPDR 656
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 168/365 (46%), Gaps = 4/365 (1%)
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
D+ + ++ A+ + + AAL L ++ + TP S + L +LG +GR EA
Sbjct: 234 DAPLFSDLISAFARAALPD--AALDLLASAQAIGLTPRSNAV-TALISALGGAGRVAEAE 290
Query: 280 KFFRDMKEKG-ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
F + G I Y +L+ + I +K AE++ E + G+ D LV
Sbjct: 291 ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDA 350
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
Y G E +++ M+ +K S + I+ GF R + A V ++ + G P
Sbjct: 351 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPD 410
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+ Y +I+ + + A F M+++G + VV +++++ + K GR AM L
Sbjct: 411 RHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFE 470
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M+ C P YN ++++ G + VE + EM+ + + P+ ++YTT++ Y R+
Sbjct: 471 EMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSG 530
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
F ++ + +G + +V +++ + + +++ M+++G + + +
Sbjct: 531 RFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLN 590
Query: 579 SAMNA 583
S MNA
Sbjct: 591 SLMNA 595
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 191/450 (42%), Gaps = 20/450 (4%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA-----FNSAMGGYNKLH 200
+ LPD + S L+AS + R A +L+ + D + L F+ + + +
Sbjct: 191 HGFLPDLASYSHLLASLLNTRDPPDA-AILERLLGDLRESRLEPDAPLFSDLISAFARAA 249
Query: 201 MYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE------CKSRKLDS 254
+ + + + ++ G+ S ++ A G + ALFLE K R
Sbjct: 250 LPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPR---- 305
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
T Y L K G A + +M + G+ D + Y+ L+ ++ + A
Sbjct: 306 ----TRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESAR 361
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
L KE E G+ V +++ + + G +K V+ M + ++ +++ F
Sbjct: 362 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTF 421
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A+ + ++ +G P VT+ ++I+A+ + + +A ++F EM++
Sbjct: 422 GKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGT 481
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
Y+ M+ + G+ R ++++MK +G PN+ Y +L+D++GR+ ++ + +
Sbjct: 482 TTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEV 541
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+ + P Y +++AY + D + R +G + ++ F + +
Sbjct: 542 MKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRR 601
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ E +LQ MK + D Y + M AL
Sbjct: 602 VVEAFSVLQFMKENDLRPDVITYTTLMKAL 631
>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
Length = 546
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 233/481 (48%), Gaps = 16/481 (3%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
+ P ++++ ++++++W+ L + +++PD T S L++ RA + + A
Sbjct: 21 YAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDAM 80
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
LQ G + L+ F++ + K+ Y ++ K+K++GI D Y ++ Y
Sbjct: 81 GWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLY 140
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K ++ L E K L S Y IL ++ +S + EA + F +MK KGI
Sbjct: 141 GKAKFYKEAQGLLAEMKEAGLMPDTVS---YTILINAYAESQKYLEAKQVFLEMKTKGIQ 197
Query: 292 EDPSIYASLICSFASITEVKLAEELF-KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
D + +I + + V+ AEELF ++ G+ ++ ++ +Y E L+ + +
Sbjct: 198 LDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFN 257
Query: 351 VVESMKNAKLKISDCIS---CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
V M+N + I+ ++G + + + A+++ ++ +G P VTY+++I+
Sbjct: 258 VFYYMQNKGGVEPNVITYNTILFLHGLTLQ--HEKAMRLVRKMQQRGIEPNAVTYSTLIS 315
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
Y + Y +A +F +++KGF+ + Y SM+ +Y + G + A L+ ++K +P
Sbjct: 316 IYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELK----QP 371
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKL-WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
++ ++ + + +A+ L + KL W+ E ++ + V+Y ++I + R + +
Sbjct: 372 DIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEI-KESVTYKSMIQLFVRNKRSKNAIDV 430
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ R +G + D +++ + +L Q+E+ KL DM+ G L++ ++ + D
Sbjct: 431 FENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGD 490
Query: 587 A 587
A
Sbjct: 491 A 491
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 111/206 (53%), Gaps = 1/206 (0%)
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+++ + +P + T++++I+ Y R A EM+ G +V +S+++ + GK
Sbjct: 50 EMVEKDLVPDKFTFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVK 109
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
A L +K+KA G P+ IYNS+++++G+AK ++ + L EM+ + PD VSYT
Sbjct: 110 DYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYT 169
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM-KS 567
+I+AY ++++ + + E + G +D +M+ V+ KL + + +L M K+
Sbjct: 170 ILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKT 229
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQA 593
G + + Y++ + ++A L +A
Sbjct: 230 LGIQQNVVTYNTMIKVYKEAELLSEA 255
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 147/342 (42%), Gaps = 39/342 (11%)
Query: 294 PSIYA--SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
PSI+A ++ + + +LAE L E EK ++ D L+ Y +E +
Sbjct: 23 PSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDAMGW 82
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++ M+ +K I ++ K + Y A ++ +L + G P +V Y S+IN Y +
Sbjct: 83 LQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGK 142
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
Y +A+ + EM++ G V+Y+ ++ Y ++ + +A + +MK KG + +V
Sbjct: 143 AKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTT 202
Query: 472 YNSLMDMHGRAKNLRQVEKL-WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
N ++D++G+ + +R E+L W + + + V+Y T+I Y A +
Sbjct: 203 CNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYM 262
Query: 531 RMNGGVIDRAIA---------------------------GI---------MVGVFSKLSQ 554
+ GGV I GI ++ ++ K +
Sbjct: 263 QNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGK 322
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ L + ++ +G ++DE LY S + AGL A+ L
Sbjct: 323 YDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRL 364
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 96/180 (53%)
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G P Y ++ R + AE + +EM +K +S++++ YG+ R+ DA
Sbjct: 20 GYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDA 79
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
M + +M+A G +P++ I+++L+++ G+ K+ + L+ +++ + PDKV Y ++I+
Sbjct: 80 MGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINL 139
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
Y +A+ + E + G + D I++ +++ + E ++ +MK++G +LD
Sbjct: 140 YGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLD 199
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
W++ K G P+++ YN ++ RA+ E L EM + + PDK +++T+IS Y
Sbjct: 14 WMIEK---GGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGY 70
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
RA + + + E G D I ++ + K+ + L +K+ G D+
Sbjct: 71 GRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDK 130
Query: 575 RLYHSAMNALRDAGLQMQAQWL 596
+Y+S +N A +AQ L
Sbjct: 131 VIYNSMINLYGKAKFYKEAQGL 152
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 82/170 (48%)
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+++ G+ + AY+ ++ + + A LV +M K P+ + +++L+ +GRA
Sbjct: 16 IEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANR 75
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
L +EME + PD V ++T+I + +++ +++ + +G D+ I
Sbjct: 76 LEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNS 135
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
M+ ++ K +E LL +MK G D Y +NA ++ ++A+
Sbjct: 136 MINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAK 185
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 163/333 (48%), Gaps = 6/333 (1%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ +L D+ G+ + EA + + E + YA LI ++ ++ AE + E +
Sbjct: 180 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 239
Query: 322 EKGMLRDPEVCLKLVLMYIE-----EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ + + + YIE +G E+ +DV + MK + K + ++N + K
Sbjct: 240 NH-HVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGK 298
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ + K+Y ++ S C P TY +++NA+ R L KAE++F ++Q+ G + V
Sbjct: 299 ASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV 358
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++++ Y + G A + + M+ GCEP+ YN ++D +GRA E +++EM+
Sbjct: 359 YNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 418
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
R + P S+ ++SAY++AR+ C E NG D + M+ ++ +L Q
Sbjct: 419 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 478
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
++ K+L +M++ D Y+ +N AG
Sbjct: 479 KMEKILAEMENGPCTADISTYNILINIYGKAGF 511
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 190/419 (45%), Gaps = 42/419 (10%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ FN + Y + Y +Y ++ + V Y +++AY G E+ + +
Sbjct: 177 VICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLV 236
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGK-SGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E ++ + +Y + L K G EA+ F+ MK Y +I +
Sbjct: 237 EMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLY 296
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
++ ++ +L+ E + P +C LV + EGL EK ++ E ++ L+
Sbjct: 297 GKASKSYMSWKLY--CEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 354
Query: 363 SDCISCAIVNGFSKRRGY-WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ A++ +S R GY + A +++ + GC P + +Y +++AY R L+S AE V
Sbjct: 355 DVYVYNALMESYS-RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 413
Query: 422 FIEMQQKGF--------------------DKC---------------VVAYSSMVAMYGK 446
F EM++ G KC +SM+ +YG+
Sbjct: 414 FEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGR 473
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G+ ++A+M+ C ++ YN L++++G+A L ++E+L+ E++ + PD V+
Sbjct: 474 LGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVT 533
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+T+ I AY+R + + C++ + E +G D A +++ S Q+E++ +L+ M
Sbjct: 534 WTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 109/229 (47%), Gaps = 4/229 (1%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++ + ++ Y A +Y QL+ +P + TYA +I AYC L +AE V +EMQ
Sbjct: 183 LIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHH 242
Query: 430 FDK---CVVAYSSMV-AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
V Y++ + + + G +A+ + +MK C+P YN +++++G+A
Sbjct: 243 VSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKS 302
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
KL+ EM + P+ +YT +++A+ R + + + + + +G D + +
Sbjct: 303 YMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNAL 362
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ +S+ ++ M+ G + D Y+ ++A AGL A+
Sbjct: 363 MESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 411
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 134/310 (43%), Gaps = 3/310 (0%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+N + Y K Y + +Y +M+S + Y ++ A+ + G EK +F +
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+ L+ ++Y L +S ++G + A + F M+ G D + Y ++ ++
Sbjct: 348 QEDGLEP---DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 404
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
AE +F+E + G+ + + L+ Y + V K +V+ M ++ +
Sbjct: 405 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 464
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+++N + + + K+ ++ + C TY +IN Y + + E++F+E+++
Sbjct: 465 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 524
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
K F VV ++S + Y + + + +M GC P+ L+ + + Q
Sbjct: 525 KNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQ 584
Query: 488 VEKLWKEMER 497
V + + M +
Sbjct: 585 VTSVLRTMHK 594
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 181/377 (48%), Gaps = 8/377 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGD---SEKVAALFLECKSRKLDSTPFSTHMYKI 264
V M+ AG ++ Y ++ A+ + G+ +E+V +L E + K + F++ M
Sbjct: 32 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS-MVNG 90
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
LC K+GR A K F +M +G+ D Y +L+ + + + + +F E ++G
Sbjct: 91 LC----KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 146
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
++ D L+ + G +E+ + +V M+ L++++ A+++GF K+ A+
Sbjct: 147 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 206
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
E++ G P V Y ++IN YC++ A ++ EM+ K VV YS++++ Y
Sbjct: 207 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 266
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K G + A L KM KG P+ Y+SL+ K L +L++ M + V PD+
Sbjct: 267 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 326
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+YTT+I + + + + ++E G + D +++ SK ++ +E +LL
Sbjct: 327 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 386
Query: 565 MKSEGTKLDERLYHSAM 581
+ E D Y + M
Sbjct: 387 LYHEDPVPDNIKYDALM 403
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 213/500 (42%), Gaps = 44/500 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +L+R L + + V + D + P+A T + LVA+ RA + A +
Sbjct: 8 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67
Query: 175 LQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+ + +G L+ FNS + G K V+++M G+ D Y ++ Y
Sbjct: 68 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127
Query: 233 KIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K+G + A+F E R L D F++ ++ K+G +A+ M+E+G+
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATC-----KAGNLEQAVALVAQMRERGL 182
Query: 291 LEDPSIYASLI---CSFASITEVKLAEELFKEAEEKGMLRDPEVCLK-LVLMYIEEGLVE 346
+ + +LI C + + LA E + K ++ VC L+ Y + G ++
Sbjct: 183 RMNEVTFTALIDGFCKKGFLDDALLAVEEMR----KCGIQPSVVCYNALINGYCKLGRMD 238
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+++ M+ ++K I++G+ K +A ++ ++++ +G +P +TY+S+I
Sbjct: 239 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 298
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
C + A ++F M Q G Y++++ + K G + A+ L +M KG
Sbjct: 299 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 358
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+V Y+ L++ ++ ++ +L ++ PD + Y ++ ++A EF V
Sbjct: 359 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA-EFKSVVAL 417
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY------HSA 580
F M G ++E K+ Q M KLD +Y H
Sbjct: 418 LKGFCMKG-------------------LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCR 458
Query: 581 MNALRDAGLQMQAQWLQQNF 600
+R A L Q L+ F
Sbjct: 459 GGNVRKA-LSFHKQMLRSGF 477
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 187/452 (41%), Gaps = 61/452 (13%)
Query: 115 PEKSTLKLLIRYLVQSKKWDS---IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
P T L+ ++ + D +VSL + N P+ T + +V +A + + A
Sbjct: 43 PNAVTYNTLVAAFCRAGELDGAERVVSLMREEG--NAKPNLVTFNSMVNGLCKAGRMEGA 100
Query: 172 NTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ + +G ++++N+ + GY K+ + ++ V+ +M G+V D + ++ A
Sbjct: 101 RKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHA 160
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K G+ E+ AL + + R L + + L D K G +AL +M++ GI
Sbjct: 161 TCKAGNLEQAVALVAQMRERGLRMNEVT---FTALIDGFCKKGFLDDALLAVEEMRKCGI 217
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
Y +LI + + + LA EL +E E K + D ++ Y + G ++
Sbjct: 218 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 277
Query: 351 VVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+ + M K + D I+ +++ G + + A +++E ++ G P + TY ++I+ +
Sbjct: 278 LNQKMLK-KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 336
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ KA + EM +KG VV YS ++ K+ R ++A L+ K+ + P+
Sbjct: 337 CKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 396
Query: 470 WIYNSLM--------------------------------------------------DMH 479
Y++LM H
Sbjct: 397 IKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 456
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
R N+R+ K+M R +P+ S +++
Sbjct: 457 CRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 488
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 111/233 (47%), Gaps = 1/233 (0%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+V R AV V + GC P VTY +++ A+CR AE+V M+++G
Sbjct: 16 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 75
Query: 430 FDKC-VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
K +V ++SMV K GR+ A + +M +G P+V YN+L+ + + L +
Sbjct: 76 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 135
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
++ EM +R + PD V++T++I A +A + V + R G ++ ++
Sbjct: 136 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 195
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
F K +++ + +++M+ G + Y++ +N G A+ L + E
Sbjct: 196 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 248
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 94/195 (48%), Gaps = 1/195 (0%)
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
++ G P TY ++ A C +A V +M+ G V Y+++VA + + G
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 450 IRDAMWLVAKMKAKG-CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ A +V+ M+ +G +PN+ +NS+++ +A + K++ EM R + PD VSY
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
T++S Y + + ++E G V D ++ K +E+ V L+ M+
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 569 GTKLDERLYHSAMNA 583
G +++E + + ++
Sbjct: 181 GLRMNEVTFTALIDG 195
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 172/413 (41%), Gaps = 27/413 (6%)
Query: 75 TAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
A P+ F+S ++G+ K + E A ++E + P+ + L+ +
Sbjct: 76 NAKPNLVTFNSMVNGLCKAGR-MEGARKVFDEMVR-EGLAPDVVSYNTLLSGYCKVGCLH 133
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAM 193
+++ + ++PD T + L+ + +A + A L+ G + + F + +
Sbjct: 134 ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 193
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRK 251
G+ K +L E+M+ GI CY ++ Y K+G + L +E K K
Sbjct: 194 DGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK 253
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
D +ST + K G A + + M +KG+L D Y+SLI +
Sbjct: 254 PDVVTYST-----IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 308
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI- 370
A ELF+ + G+ D L+ + +EG VEK L + + M K + D ++ ++
Sbjct: 309 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR-KGVLPDVVTYSVL 367
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY---------------ASIINAYCRIALY 415
+NG SK A ++ +L + +P + Y +++ +C L
Sbjct: 368 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLM 427
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+A+KV+ M + + YS ++ + + G +R A+ +M G PN
Sbjct: 428 KEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 480
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 64/348 (18%), Positives = 133/348 (38%), Gaps = 21/348 (6%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VPD F S +H K ++ ++ R + T LI + D
Sbjct: 148 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRER--GLRMNEVTFTALIDGFCKKGFLDDA 205
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGG 195
+ E+ + + P + L+ + + +A L+ ++ + ++ +++ + G
Sbjct: 206 LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISG 265
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
Y K+ S + +KM G++ D+ Y ++ + LF +
Sbjct: 266 YCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD 325
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
F+ Y L D K G +AL +M KG+L D Y+ LI + K A
Sbjct: 326 EFT---YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 382
Query: 316 L-FKEAEEKGMLRDPE-----VC---------LKLVLMYIEEGLVEKTLDVVESMKNAKL 360
L FK E + + + +C + L+ + +GL+++ V +SM +
Sbjct: 383 LLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNW 442
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
K+ + +++G + A+ ++Q++ G P + S++
Sbjct: 443 KLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRG 490
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/543 (22%), Positives = 235/543 (43%), Gaps = 24/543 (4%)
Query: 59 STNFPT-IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEK 117
S PT I+ NR +AV K++D L G K + + +D Y + + +K
Sbjct: 64 SRPLPTPIDFNR---LCSAVARTKQYDLVL-GFCKGMELNGIEHDMYTMTIMINCYCRKK 119
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQ 176
KLL + V + W PD T S LV C+ R + + +
Sbjct: 120 ---KLLFAFSVLGRAWK-----------LGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 165
Query: 177 VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
+ L+ ++ + G +++ ++M G D Y ++ K G+
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
S LF + + R + + S Y I+ DSL K G +AL F +M+ KGI D
Sbjct: 226 SALALDLFRKMEERNIKA---SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y+SLI + + ++ +E + ++ D L+ ++++EG + + ++ M
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ ++++GF K A ++++ ++S+GC P VTY+ +IN+YC+
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
++F E+ KG + Y+++V + ++G++ A L +M ++G P+V Y L+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D L + +++++M++ ++T Y +I A + D + G
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA-LRDAGLQMQAQW 595
D +M+G K + E L + MK +G D+ Y+ + A L +GL +
Sbjct: 523 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 582
Query: 596 LQQ 598
+++
Sbjct: 583 IEE 585
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/480 (20%), Positives = 202/480 (42%), Gaps = 18/480 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELA--YDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
PD F + ++G + + E D E K+ RP+ T+ LI L +
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ----RPDLVTVSTLINGLCLKGRVSE 193
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMG 194
+ L + Y PD T ++ ++ +A L + + +++ ++ +
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL-- 252
K + + ++ +M+ GI D Y ++ G + A + E R +
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D FS L D K G+ EA + + +M +GI D Y SLI F +
Sbjct: 314 DVVTFSA-----LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A ++F KG +P++ +L+ Y + V+ + + + + L + +
Sbjct: 369 ANQMFDLMVSKGC--EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
V GF + AA +++++++S+G P VTY +++ C +KA ++F +MQ+
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+ Y+ ++ ++ DA L + KG +P+V YN ++ + +L + +
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L+++M+ TPD +Y +I A+ V+ E ++ G D + +++ + S
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 146/333 (43%), Gaps = 1/333 (0%)
Query: 252 LDSTPFSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ S P T + + LC ++ ++ + L F + M+ GI D +I + ++
Sbjct: 62 IQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKL 121
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A + A + G D LV + EG V + + +V+ M K + +
Sbjct: 122 LFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTL 181
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+NG + A+ + ++++ G P +VTY ++N C+ + A +F +M+++
Sbjct: 182 INGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNI 241
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
VV YS ++ K G DA+ L +M+ KG + +V Y+SL+ K
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
+ +EM R + PD V+++ +I + + + + YNE G D ++ F
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
K + + E ++ M S+G + D Y +N+
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 102/256 (39%), Gaps = 10/256 (3%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
EL + + PD ++S + G K+ E + K E P+ T +LI
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE--PDIVTYSILIN 393
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EI 184
++K+ D + L + ++P+ T + LV ++ K A L Q ++ G
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+++ + + G + ++EKM+ + + L G Y I+ + +LF
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ + + Y ++ L K G EA FR MKE G D Y LI +
Sbjct: 514 CSLSDKGVKPDVVT---YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 570
Query: 305 AS----ITEVKLAEEL 316
I+ V+L EE+
Sbjct: 571 LGGSGLISSVELIEEM 586
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/536 (22%), Positives = 229/536 (42%), Gaps = 16/536 (2%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I+L D +P F L G++ + +L Y + ++ + R + + +LI
Sbjct: 64 IDLFSDMLRSRPLPSVVDF-CKLMGVVVRMERPDLVISLYQKMER-KQIRCDIYSFTILI 121
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGE 183
+ K +S + PD T + L+ CV R + N Q+F T
Sbjct: 122 KCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCR 181
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ F + M G + + + ++M G+ Y I++ K GD+ V+AL
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT--VSAL 239
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
L K ++ + +Y + DSL K GR +A F +M+EKGI D Y S+I
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
F S AE+L +E E+ + D L+ +++EG + ++ + M + +
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
++++GF K+ AA ++ + ++GC P +T+ ++I+ YC ++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM + G Y++++ + G + A+ L+ +M + G P++ ++L+D
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 484 NLRQVEKLWKEMERRK-----------VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
L+ +++K M++ K V PD +Y +IS +F + Y E
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G V D M+ K S+++E ++ M S+ + + + +N AG
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/469 (18%), Positives = 206/469 (43%), Gaps = 18/469 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + + + GM K T A + + +++ P +I L + +
Sbjct: 217 PTQITYGTIVDGMCKKGDTVS-ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGG 195
+L + + + PD T + ++ + ++ A LLQ + + +I+ ++ +N+ +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML-ERKISPDVVTYNALINA 334
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K ++ +Y++M GI+ ++ Y +++ + K + +F ++
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ + L D + R + ++ +M E G++ D + Y +LI F + ++ A +
Sbjct: 395 LIT---FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK--LKISDCISCA---- 369
L +E G+ D C L+ + G ++ L++ + M+ +K L S +
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 370 -----IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++G + A ++YE++ +G +P +TY+S+I+ C+ + +A ++F
Sbjct: 512 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M K F VV +++++ Y K GR+ D + L +M +G N Y +L+ + N
Sbjct: 572 MGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+ +++EM V PD ++ +++ E V + +M+
Sbjct: 632 INGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/520 (20%), Positives = 215/520 (41%), Gaps = 18/520 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F++ LHG+ + + E A + +++ + RP T L+ L + + V
Sbjct: 147 PDVVTFNTLLHGLCVEDRVSE-ALNLFHQMFE-TTCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 138 SLSEDFKIYNVLPDAHTCSRLV-ASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
+L + + P T +V C + N L ++ I ++ +++ +
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K + ++ +M+ GI D Y ++ + G L E RK+
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y L ++ K G+ FEA + + +M +GI+ + Y+S+I F + AE
Sbjct: 325 VVT---YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F KG + L+ Y ++ ++++ M L +++GF
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ-------- 427
AA+ + +++IS G P VT ++++ C A ++F MQ+
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 428 ---KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
G + V Y+ +++ G+ +A L +M +G P+ Y+S++D +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
L + +++ M + +P+ V++TT+I+ Y +A D ++ + E G V +
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ F K+ I + + Q+M S G D + + L
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 110/506 (21%), Positives = 204/506 (40%), Gaps = 65/506 (12%)
Query: 114 RPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
RP S + L+ +V+ ++ D ++SL + + + D ++ + L+ K A
Sbjct: 74 RPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFA 133
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKL-HMYYSTILVYEKMKSAGIVLDSGC------Y 224
L F G+I L + + +N L H V E + + ++ C +
Sbjct: 134 ---LSTF---GKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF 187
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
+M + G + AL L T + Y + D + K G AL R
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT---YGTIVDGMCKKGDTVSALNLLRK 244
Query: 285 MKE-KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
M+E I+ + IY+++I S A+ LF E +EKG+ D
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD--------------- 289
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
L SM + GF + A ++ ++++ + P VTY
Sbjct: 290 -----LFTYNSM---------------IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
++INA+ + + +AE+++ EM +G + YSSM+ + K R+ A + M K
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
GC PN+ +N+L+D + AK + +L EM + D +Y T+I + + +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVF---SKLSQIEELVKLLQDMKSE--------GTKL 572
+ E +G D ++ KL E+ K++Q K + G +
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 573 DERLYHSAMNALRDAGLQMQAQWLQQ 598
D + Y+ ++ L + G ++A+ L +
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYE 535
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/233 (18%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
S + +GF + +G A+ ++ ++ +P V + ++ R+ ++ +M+
Sbjct: 47 SLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKME 106
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+K + +++ ++ + ++ A+ K+ G P+V +N+L +HG R
Sbjct: 107 RKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTL--LHGLCVEDR 164
Query: 487 QVE--KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
E L+ +M P+ V++TT+++ R V + +G + G
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA-MNALRDAGLQMQAQWL 596
+V K + LL+ M+ + + +SA +++L G AQ L
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/467 (20%), Positives = 197/467 (42%), Gaps = 8/467 (1%)
Query: 77 VPDAKKFDSFLHGML--KDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
+PD + L +L +DP L + ++ P+ LI ++ D
Sbjct: 187 LPDLASYSHLLASLLNTRDPPDAALLERLLGDLRE-SRLEPDAPLFSDLISAFARAALPD 245
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSA 192
+ + L + + P ++ + L+++ A + A L F GEI A+N+
Sbjct: 246 AALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNAL 305
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY ++ + V ++M G+ D Y +++AY + G E L E ++
Sbjct: 306 LKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEA--- 362
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D S++++ + G +A R+M+ G+ D Y +I +F +
Sbjct: 363 DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGH 422
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A + F E+ + D L+ + + G ++ +++ E M+ + ++N
Sbjct: 423 AMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMIN 482
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
++ + + ++ QG +P +TY ++++ Y R Y +A M+ G
Sbjct: 483 LLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKP 542
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
Y ++V Y + G A+ +V MKA G E ++ + NSL++ G + + + +
Sbjct: 543 SPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVL 602
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+ M+ + PD ++YTT++ A R +FD Y E +G DR
Sbjct: 603 QFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDR 649
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 195/450 (43%), Gaps = 20/450 (4%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA-----FNSAMGGYNKLH 200
++ LPD + S L+AS + R A LL+ + D + L F+ + + +
Sbjct: 184 HDFLPDLASYSHLLASLLNTRDPPDA-ALLERLLGDLRESRLEPDAPLFSDLISAFARAA 242
Query: 201 MYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE------CKSRKLDS 254
+ + + + ++ G+ S ++ A G + ALFLE K R
Sbjct: 243 LPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPR---- 298
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
T Y L + G A + +M + G+ D + Y+ L+ ++ + A
Sbjct: 299 ----TRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
L KE E G+ V +++ + + G +K V+ M+ + ++ +++ F
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A+ ++++ + P VT+ ++I+A+C+ + +A ++F EM++
Sbjct: 415 GKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGT 474
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
Y+ M+ + G+ R ++++MK +G PN+ Y +L+D++GR+ ++ +
Sbjct: 475 TTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEA 534
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+ + P Y +++AY + D + + +G + + ++ F + +
Sbjct: 535 MKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRR 594
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ E +LQ MK G + D Y + M AL
Sbjct: 595 VVEAFSVLQFMKENGLRPDVITYTTLMKAL 624
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 144/338 (42%), Gaps = 9/338 (2%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE- 319
++ L + ++ AL+ + G+ + +LI + S V AE LF E
Sbjct: 230 LFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEF 289
Query: 320 ---AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E K R LK Y+ G ++ V++ M + + +V+ ++
Sbjct: 290 FLAGEIKPRTRAYNALLK---GYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYT- 345
Query: 377 RRGYWAAVKVY-EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
R G W + ++ +++ + G P ++ I+ + + KA V EMQ G
Sbjct: 346 RAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRH 405
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+ M+ +GK + AM +M+ + EP+V +N+L+D H + + +L++EM
Sbjct: 406 FYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEM 465
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
P +Y +I+ ++ +E + G V + +V V+ + +
Sbjct: 466 RESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRY 525
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+E + ++ MK++G K +YH+ +NA GL A
Sbjct: 526 KEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHA 563
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/481 (20%), Positives = 203/481 (42%), Gaps = 33/481 (6%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P K T +LI L + K+ + SL + V D HT S L+ ++ R A L
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ ++ G I ++ + +K + +++ M ++G++ + Y ++E Y +
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394
Query: 234 IGDSEKVAALFLECKSRKLDSTPFS--------------------------------THM 261
+ + L +E K R + +P++ +
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI 454
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L + ++ R +A++ ++MKE+GI D Y SLI + + A E
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E G+ + + YIE V+ M+ + + + ++N + K+
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVI 574
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A Y ++ QG + TY ++N + AE++F EM+ KG V +Y ++
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ K G ++ A + +M +G PNV IYN L+ R+ + + ++L EM + +
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ V+Y T+I Y ++ + + ++E ++ G V D + +V +L+ +E + +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 562 L 562
Sbjct: 755 F 755
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 122/528 (23%), Positives = 217/528 (41%), Gaps = 41/528 (7%)
Query: 80 AKKFDSFLHGMLKDPQTQELAYDYYNEAKKL------PEFRPEKSTLKLLIRYLVQSKKW 133
K D L G+L D +A Y EA + E P S K+L+ L++ +
Sbjct: 146 GKSDDGVLFGILFDGY---IAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRL 202
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM 193
D + + NV+ D T L+ + RA ++ +L F T+ E N +
Sbjct: 203 DLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL--FKTEKEFRTATLN--V 258
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G KL E M G+V Y +++ KI E +L +E S
Sbjct: 259 DGALKLK---------ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSL--- 306
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
H Y +L D L K A A +M GI P +Y IC + ++ A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+ LF G++ + L+ Y E V + +++ MK + IS +V G
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
A + +++I+ GC P V Y ++I + + + + A +V EM+++G
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ Y+S++ K R+ +A + +M G +PN + Y + + + A +K K
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK 546
Query: 494 EMERRKVTPDKVSYTTVISAY-NRAREFDMCVKFYNEFRMNGGVIDRAIAG-------IM 545
EM V P+KV T +I+ Y + + + C + + ++D+ I G +M
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRS-------MVDQGILGDAKTYTVLM 599
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G+F K ++++ ++ ++M+ +G D Y +N G +A
Sbjct: 600 NGLF-KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/442 (19%), Positives = 186/442 (42%), Gaps = 46/442 (10%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP LI+ +Q+ ++ + + ++ K + PD + L+ +A++ A +
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L + +G + + + + GY + + S ++M+ G++ + ++ Y
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K EKV +S Y +L + L K+ + +A + FR+M+ KGI
Sbjct: 569 K---KEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLD 350
D Y LI F+ + ++ A +F E E+G+ P V + +L+ + G +EK +
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL--TPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+++ M L + C I++G+ K A ++++++ +G +P Y ++++ C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 411 RIALYSKAEKVF--------------------------IEMQQKGFDKCV---------- 434
R+ +A +F E++ + ++ +
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 435 --VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
V Y+ M+ K G + A L +M+ P V Y SL++ + + ++ ++
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 493 KEMERRKVTPDKVSYTTVISAY 514
E + PD + Y+ +I+A+
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAF 885
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 189/451 (41%), Gaps = 28/451 (6%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR-----PEKSTLKLLIRYLVQSKK 132
P+A + +F+ G ++ A ++ + K + E R P K LI + +K
Sbjct: 520 PNAFTYGAFISGYIE-------ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEK 572
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFN 190
S +L DA T + L+ + K A + + G IA + ++
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFSYG 631
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ G++KL ++++M G+ + Y ++ + + G+ EK L E +
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
L + Y + D KSG EA + F +MK KG++ D +Y +L+ + +V
Sbjct: 692 GLHPNAVT---YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL----KISDCI 366
+ A +F +KG L+ + G E +V+ + + K +D
Sbjct: 749 ERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
+++ K AA +++ Q+ + +P +TY S++N Y ++ ++ VF E
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK-----GCEPNVWIYNSLMDMHGR 481
G + + YS ++ + K G A+ LV +M AK GC+ ++ +L+ +
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
+ EK+ + M R + PD + +I+
Sbjct: 928 VGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 152/385 (39%), Gaps = 47/385 (12%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
R Q + DAK + ++G+ K+ + + A + + E + P+ + +LI
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDD-AEEIFREMRG-KGIAPDVFSYGVLINGFS 638
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALL 187
+ S+ ++ + P+ + L+ R+ + + A LL G +
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+ + + GY K ++++MK G+V DS Y +++ ++ D E+ +F
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758
Query: 248 KSRKLDST-PFSTHM----------------------------------YKILCDSLGKS 272
K ST PF+ + Y I+ D L K
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
G A + F M+ ++ Y SL+ + + +F EA G+ D +
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMY 878
Query: 333 LKLVLMYIEEGLVEKTLDVVESM--KNA-----KLKISDCISCAIVNGFSKRRGYWAAVK 385
++ +++EG+ K L +V+ M KNA KL IS C A+++GF+K A K
Sbjct: 879 SVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR--ALLSGFAKVGEMEVAEK 936
Query: 386 VYEQLISQGCIPGQVTYASIINAYC 410
V E ++ IP T +IN C
Sbjct: 937 VMENMVRLQYIPDSATVIELINESC 961
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 191/403 (47%), Gaps = 3/403 (0%)
Query: 182 GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
G ++ LA + + G+ K + ++M G+ L++ CY +++ Y + D +V
Sbjct: 128 GSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQ 187
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
L ++ +++T Y IL DSL +G + +MK K + D +Y ++I
Sbjct: 188 ELLEIMENGGIEAT---VGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVI 244
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
++ V+ A E+F E G+ + L+ + + G +E ++ M+ +
Sbjct: 245 NAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVG 304
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ I +++G+ ++ A+KV + G TY ++ CR+ ++A+ +
Sbjct: 305 HNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTL 364
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
M +KG V Y+++++++ K G + +A L +M KG P+V YN +MD + +
Sbjct: 365 LHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIK 424
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
++R+ E+ KEME++ + PD +Y +++ + + D+ +K + E + G +
Sbjct: 425 KGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVA 484
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ +K + EE +L DM G D+ LY + + +L
Sbjct: 485 YTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 8/216 (3%)
Query: 394 GCIPGQVT---YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
G PG V+ + +++ +C+ A + EM + G + Y+S++ Y +
Sbjct: 124 GSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDD 183
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
L+ M+ G E V Y L+D A ++ +VE + EM+ + V D YT V
Sbjct: 184 ARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAV 243
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
I+AY RA + ++E NG + G+++ F K+ Q+E LL DM+ G
Sbjct: 244 INAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGV 303
Query: 571 KLDERLYHSAMN-----ALRDAGLQMQAQWLQQNFE 601
++ ++++ ++ + D L+++A + E
Sbjct: 304 GHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIE 339
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 96/227 (42%), Gaps = 1/227 (0%)
Query: 377 RRGYWAAVKVYEQLISQGCIPGQV-TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
RR A V+ +++ G I V TY ++++ SK E V EM+ K V
Sbjct: 179 RRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVY 238
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y++++ Y + G +R A + + G EPN Y L++ + + E L +M
Sbjct: 239 LYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADM 298
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ R V +++ + T+I Y R D +K G +D + +++++
Sbjct: 299 QGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRM 358
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
E LL M +G + Y + ++ G ++A+ L + G
Sbjct: 359 AEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAG 405
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 206/474 (43%), Gaps = 22/474 (4%)
Query: 139 LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE-IALLAFNSAMGGYN 197
L + ++ V P+A T + R R+ A LQ+ G FN+ + G+
Sbjct: 233 LLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFC 292
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
+ I V++ MK G+V D+ Y +++ K GD L +E + T
Sbjct: 293 REGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLV 352
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S Y L L ++G+ A + FR ++E+G D +Y+ ++ +++ +L+
Sbjct: 353 S---YSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLW 409
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNGFSK 376
+ + D L+ + + L V E M ++ + + ++C I V+GF K
Sbjct: 410 NDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVS-PNVVTCTILVDGFGK 468
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
R A ++ G +P Y IIN C++ +F +M ++G+ V
Sbjct: 469 ERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVV 528
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
YS ++ + K ++ +A L KM +G +PNV+ Y SL++ L +V L+K M
Sbjct: 529 YSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMI 588
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+TPD++ YT++I Y + ++ + G D + ++G FSK+ ++
Sbjct: 589 WEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMD 648
Query: 557 ELVKLLQDMKSEG--------TKL--------DERLYHSAMNALRDAGLQMQAQ 594
L+++M ++G T L DER + N++ AG+ A+
Sbjct: 649 GAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAK 702
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 401 TYASIINAYCRIAL-------YSKAEKVFIEMQQKGFD-KCVVAYSSMVAMYGKTGRIRD 452
YA+II + +++ Y++A+KV +E+Q F KC+V + ++ Y ++
Sbjct: 143 VYATIIRIFVELSMFEDALLTYTEAKKVGVELQLCNFLLKCLVERNQII--YARS----- 195
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMD--MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
L MK+ G PNV+ Y+ LM HG L + +L EME + V P+ +Y T
Sbjct: 196 ---LFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTY 252
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
+ +R R+ F G + ++ F + Q++E +++ MK G
Sbjct: 253 LYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGL 312
Query: 571 KLDERLYHSAMNALRDAG 588
D Y ++ L G
Sbjct: 313 VPDTHSYSILVDGLCKQG 330
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/502 (21%), Positives = 221/502 (44%), Gaps = 15/502 (2%)
Query: 108 KKLPEF--RPEKSTLKLLIRYLVQSKKWDS---IVSLSEDFKIYNVLPDAHTCSRLVASC 162
+++PE P+ + +L++ L K+ + ++ + D ++++ P+ + S ++
Sbjct: 154 QRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGF 213
Query: 163 -VRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
+ K N L++ ++ + + + G K ++ V+++M G+ +
Sbjct: 214 FTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNI 273
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y ++ Y IG ++V + E + + Y L + L K+GR EA F
Sbjct: 274 DTYNCLIHGYLSIGKWKEVVRMLEEMSA---GGPKPNCCTYGSLLNYLCKNGRCREARFF 330
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
F M KGI + Y ++ +A+ + +L G+ + + Y +
Sbjct: 331 FDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAK 390
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G+++K +D+ M+ L A+++ K A + Q+I++G P V
Sbjct: 391 CGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVV 450
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
++S++ C + + K E++F EM G +V +++++ K GR+ + LV ++
Sbjct: 451 FSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIE 510
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
G P+V YN+L+D H A + + KL + M + PD SY T++ Y +A D
Sbjct: 511 CMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRID 570
Query: 522 MCVKFYNEFRMNG---GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ + NG GV+ I+ G+F + + E +L +M + GTK D Y+
Sbjct: 571 SAYSHFRKMLSNGITPGVV--TYNTILHGLF-QTKRFSEAKELYLNMINSGTKWDIYTYN 627
Query: 579 SAMNALRDAGLQMQAQWLQQNF 600
+N L + +A + QN
Sbjct: 628 IILNGLCKSNCVDEAIKMFQNL 649
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/477 (19%), Positives = 200/477 (41%), Gaps = 6/477 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P T LI + KW +V + E+ P+ T L+ + + + A
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
I G + ++ + + GY + M + GI + + AY
Sbjct: 330 FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYA 389
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K G +K +F + + + L S Y L D+L K GR +A F M +G+
Sbjct: 390 KCGIIDKAMDIFNKMRQQGLSPDAVS---YGALIDALCKLGRVDDAEVKFNQMINEGVTP 446
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
D +++SL+ ++ + + EELF E G+ + ++ +EG V + +V
Sbjct: 447 DIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLV 506
Query: 353 ESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+S++ ++ D IS +++G A K+ E ++S G P +Y ++++ YC+
Sbjct: 507 DSIECMGVR-PDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCK 565
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
A F +M G VV Y++++ +T R +A L M G + +++
Sbjct: 566 AGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYT 625
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
YN +++ ++ + + K+++ + + + + +++ +I A + + + +
Sbjct: 626 YNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIP 685
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
NG V + ++V + +EE L M+ GT + ++ ++ + L G
Sbjct: 686 ANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 742
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 151/345 (43%), Gaps = 7/345 (2%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS---IYASLICSFASITEVKLAEELFK 318
Y IL L RA EAL+ M + + P Y+++I F + +V LF
Sbjct: 168 YNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFL 227
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS-DCISCAIVNGFSKR 377
E ++G+ D ++ + L ++ V + M + +K + D +C +++G+
Sbjct: 228 EMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNC-LIHGYLSI 286
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
+ V++ E++ + G P TY S++N C+ +A F M KG V Y
Sbjct: 287 GKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTY 346
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
M+ Y G + + L+ M A G PN I+N + + + + ++ +M +
Sbjct: 347 GIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQ 406
Query: 498 RKVTPDKVSYTTVISAYNR-AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ ++PD VSY +I A + R D VKF N+ G D + +V + + E
Sbjct: 407 QGLSPDAVSYGALIDALCKLGRVDDAEVKF-NQMINEGVTPDIVVFSSLVYGLCTVDKWE 465
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
++ +L +M + G + +++ + L G M+ Q L + E
Sbjct: 466 KVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIE 510
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 109/552 (19%), Positives = 219/552 (39%), Gaps = 48/552 (8%)
Query: 73 HQTAVPDAKKFDSFLHGML---KDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
++ PD F S ++G+ K + +EL ++ N P ++ L +
Sbjct: 441 NEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVG-----IHPNIVFFNTILCNLCK 495
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLA 188
+ L + + V PD + + L+ A A+ LL+ ++ G + +
Sbjct: 496 EGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFS 555
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N+ + GY K S + KM S GI Y I+ ++ + L+L
Sbjct: 556 YNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMI 615
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ T + + Y I+ + L KS EA+K F+++ KG+ + + +I +
Sbjct: 616 N---SGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGG 672
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ A +LF G++++ +V IEEG +L+ +S+ +A K +
Sbjct: 673 RKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEG----SLEEFDSLFSAMEKNGTAPNS 728
Query: 369 AIVNGFSKR---RGYWAAVKVYEQLISQGCIPGQVTYAS--------------------- 404
++N +R RG + Y + + + + S
Sbjct: 729 QMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKK 788
Query: 405 --IINAYCRIALYSKAEKV------FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
I+N AL KA ++ F EM KG VV Y++++ +TGR +A L
Sbjct: 789 YRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKEL 848
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
M + N++ YN +++ ++ + + K+++ + + + + +++ +I A +
Sbjct: 849 YLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLK 908
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ + + NG V D ++ + +EE L M+ GT LD RL
Sbjct: 909 GGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRL 968
Query: 577 YHSAMNALRDAG 588
++ + L G
Sbjct: 969 LNALVRRLLQRG 980
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 128/305 (41%)
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
++ ++M G + D+ Y +++ +E+ L ++ S P + Y +
Sbjct: 151 VLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVI 210
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ G+ + F +M ++GI D Y ++I AE +F++ + G+
Sbjct: 211 NGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVK 270
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+ + L+ Y+ G ++ + ++E M K + C +++N K A
Sbjct: 271 PNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFF 330
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
++ +I +G P TY +++ Y S+ + M G ++ + Y K
Sbjct: 331 FDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAK 390
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G I AM + KM+ +G P+ Y +L+D + + E + +M VTPD V
Sbjct: 391 CGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVV 450
Query: 507 YTTVI 511
+++++
Sbjct: 451 FSSLV 455
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 39/239 (16%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM-W 455
P + TY+ +I +CR+ F + + G+ + + ++ R+ +AM
Sbjct: 92 PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151
Query: 456 LVAKMKAKGCEPNVWIYNSLMD--------------MHGRAKNL---------------- 485
L+ +M GC P+ YN L+ +H A +
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211
Query: 486 -----RQVEK---LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
QV+K L+ EM R + PD V+YTTVI +A+ FD + + NG
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKP 271
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ ++ + + + +E+V++L++M + G K + Y S +N L G +A++
Sbjct: 272 NIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFF 330
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 81/469 (17%), Positives = 180/469 (38%), Gaps = 34/469 (7%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD+ +++ LHG K + AY ++ + P T ++ L Q+K++
Sbjct: 551 PDSFSYNTLLHGYCKAGRIDS-AYSHFRKMLS-NGITPGVVTYNTILHGLFQTKRFSEAK 608
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L + D +T + ++ ++ A + Q + G ++ ++ FN +G
Sbjct: 609 ELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGAL 668
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K + ++ + + G+V + Y ++E + G E+ +LF + + + T
Sbjct: 669 LKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLF---SAMEKNGTA 725
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS---------- 306
++ M L L G A + + E+ + S + LI F+S
Sbjct: 726 PNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSL 785
Query: 307 ------------------ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
+ A LF+E KG+ D ++ + G +
Sbjct: 786 PKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEA 845
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
++ SM N++ +++ I+NG K A K+++ L S+G +T+ +I A
Sbjct: 846 KELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGA 905
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+ A +F + G VV Y + + G + + L M+ G +
Sbjct: 906 LLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLD 965
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+ N+L+ + ++ + +++ + + + + + +IS ++R
Sbjct: 966 SRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRG 1014
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 126/577 (21%), Positives = 228/577 (39%), Gaps = 83/577 (14%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F + +HG K Q Q + + N+A L FRP+ +I ++ D+
Sbjct: 88 PDVIAFTTLIHGFCKAGQPQ-VGHMLLNQA--LKRFRPDVFLYTSVIHGYCKAGDLDTGF 144
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG----EIALLAFNSAM 193
+ E+ +PDA L+ + + A L + G + + A+
Sbjct: 145 KILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEAL 204
Query: 194 GGYNKL----HMYYSTIL----------------------------VYEKMKSAGIVLDS 221
+ KL +Y I +Y+ + + +
Sbjct: 205 SNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSR 264
Query: 222 GCYCQIMEAYYKIG---DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
Y +M+ Y K+G D K+ +EC D+ P Y IL ++ R +A
Sbjct: 265 VAYNSLMDGYCKLGRVDDGLKLLLQMVEC-----DNFP-DIQTYNILVAGFSRANRLDDA 318
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE--------KGMLRDPE 330
L+ F+ + G + + Y ++I ++ A+ F EA + KG+
Sbjct: 319 LELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKR 378
Query: 331 V--------------CLKLVLMY-------IEEGLVEKTLDVVESMKNAKLKISDCISCA 369
+ C V+ Y ++ G +E L E M + +
Sbjct: 379 IDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTV 438
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++G K + A KV+EQ++ +GC+P +TY ++I+ + + + +A K+ M KG
Sbjct: 439 VIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG 498
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH---GRAKNLR 486
+ V Y S+V + K I +A ++A+M+ +GCEP ++I+ SL+ + GRA+
Sbjct: 499 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAY 558
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
QV EM R PD + YT++I ++ G D G ++
Sbjct: 559 QV---LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTII 615
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
FSK+ +E ++L+ M G D Y+S M+
Sbjct: 616 QNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG 652
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 119/524 (22%), Positives = 225/524 (42%), Gaps = 27/524 (5%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
++ H +PD + L+G+ K + + A + + E +P E + ++ Y
Sbjct: 9 KEMHTTGLMPDVVNCNIVLNGLCKARKIDK-AIELFLE---MPSMGCEPT----IVSYNT 60
Query: 129 QSKKWDSIVSLSEDFKIYNVL------PDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
SI + E +K +N + PD + L+ +A + ++ + LL +
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ + S + GY K + + E+M +AG + D+ Y +++ K+G ++
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180
Query: 243 LFLECKSRKLDSTPFSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF R S ++ + L ++L G+ EA + +R+M E+G + SLI
Sbjct: 181 LF----ERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLI 236
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ +V A E+++ K + L+ Y + G V+ L ++ M
Sbjct: 237 FALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECD-N 295
Query: 362 ISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
D + I V GFS+ A+++++ L S GC P TY +II +A+
Sbjct: 296 FPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKA 355
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
F E V++Y++++ + RI +A L K+K GC PNV Y +++D
Sbjct: 356 FFDEALD------VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLL 409
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+A + K +++M P + +YT VI +A+ K + + G V D
Sbjct: 410 KAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTI 469
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ FSK S+++E KLL M ++G + Y S ++
Sbjct: 470 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGF 513
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/517 (20%), Positives = 209/517 (40%), Gaps = 45/517 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T +L+ ++ + D + L + Y P+A T + ++ A++ + A
Sbjct: 297 PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF 356
Query: 175 LQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
D + ++++ + + G ++EK+K+AG + Y +++ K
Sbjct: 357 F-----DEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKA 411
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
G E F + P T Y ++ D L K+ +A K F M +KG + D
Sbjct: 412 GRIEDGLKNFEDMSGSS--CVPTRT-TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDT 468
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
Y +LI F+ +++ A +L KG +V + + ++ + +V+
Sbjct: 469 ITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQ 528
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
M+ + I ++++ + + A +V ++ ++GC P + Y S+I+
Sbjct: 529 MRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGR 588
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+A VF M +KG + Y +++ + K G + A ++ M G P+ + YNS
Sbjct: 589 VPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNS 648
Query: 475 LMD---------------------------------MHGRAKNLR--QVEKLWKEM-ERR 498
LMD MHG K+ + + L+KEM E+
Sbjct: 649 LMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKD 708
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+V P VSYT +I +A + E G + + ++ +K +I E
Sbjct: 709 EVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 768
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
KL++DM G D + Y + + L D+ + + W
Sbjct: 769 KKLVEDMVKLGVNPDVQAYSALITGLIDSSM-VDTAW 804
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 112/526 (21%), Positives = 211/526 (40%), Gaps = 79/526 (15%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + + + G+LK + ++ ++ + + P ++T ++I L +++
Sbjct: 396 PNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGS--SCVPTRTTYTVVIDGLCKAQMLPDAC 453
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ E +PD T + L+ +A K A LL V +T G E + + S + G+
Sbjct: 454 KVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGF 513
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
KL M V +M+ G + ++ Y G +E+ + E +R P
Sbjct: 514 CKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG--CAP 571
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+Y L D L +GR EA F M EKG D Y ++I +F+ I
Sbjct: 572 -DVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKI--------- 621
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFS 375
G VE +++E M + + DC + ++++G+
Sbjct: 622 --------------------------GNVEAAGEILELMAKSGVG-PDCFAYNSLMDGYV 654
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG-FDKCV 434
K A VY+++++ G P VT+ +++ + +A +F EM +K +
Sbjct: 655 KLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTL 714
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V+Y+ ++ GK GR+ +A +M +G P Y SL+ +A + + +KL ++
Sbjct: 715 VSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVED 774
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M + V PD +Y+ +I+ G+ID ++ VF
Sbjct: 775 MVKLGVNPDVQAYSALIT----------------------GLIDSSMVDTAWDVF----- 807
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
Q+M G +E Y R AG + + ++Q+F
Sbjct: 808 --------QEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHF 845
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 117/246 (47%), Gaps = 4/246 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
PDA T ++ + + + A +L++ G A+NS M GY KL V
Sbjct: 606 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGV 665
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
Y++M ++GI ++ + +M +K G +++ +LF E + D P + Y IL D
Sbjct: 666 YDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEK--DEVPPTLVSYTILIDG 723
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
LGK+GR EA F++M ++GI+ + Y SLI S A + A++L ++ + G+ D
Sbjct: 724 LGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPD 783
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
+ L+ I+ +V+ DV + M ++ + GF + G ++ +
Sbjct: 784 VQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF-RAAGRALDLEAVK 842
Query: 389 QLISQG 394
Q SQG
Sbjct: 843 QHFSQG 848
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 122/256 (47%), Gaps = 3/256 (1%)
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIV-NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
+E+ LD ++ M L + D ++C IV NG K R A++++ ++ S GC P V+Y
Sbjct: 1 MEEALDCLKEMHTTGL-MPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYN 59
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
++I+ I +A K F M G + V+A+++++ + K G+ + L+ + K
Sbjct: 60 TVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQ-ALK 118
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
P+V++Y S++ + +A +L K+ +EM PD +Y +I + D
Sbjct: 119 RFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ + R +G + D ++ S +++E +L ++M G + + S + A
Sbjct: 179 YELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFA 238
Query: 584 LRDAGLQMQAQWLQQN 599
L AG +A + Q
Sbjct: 239 LCKAGKVDEANEIYQT 254
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 216/490 (44%), Gaps = 20/490 (4%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ T+ L++ + V L ++ + DA T L+ +ARK +A
Sbjct: 73 FEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAI 132
Query: 173 TLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L + + + + + + K M + ++ +M AGI+ D Y +M+
Sbjct: 133 KLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC 192
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+ G ++ F E + R + + ++ Y L L ++G E F M ++G
Sbjct: 193 RFGRLKEALEFFKEMEGRGISADVYT---YNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 249
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLD 350
D + LI +V A+++ + KG ++P++ LM G +E
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQILELMHHKG--KEPDILTYNTLMNGLCLVGQLEDATK 307
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ ES+ + +K++ ++NG+ K + A +++E++ +G P VTY ++I A C
Sbjct: 308 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALC 367
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ A+K+F+EMQ G + Y ++ K G + +A+ L +K +PN+
Sbjct: 368 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIE 427
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+++ L+D RA L + K + E+ + + PD ++Y +I+ VK +
Sbjct: 428 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQM 487
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL-------------Y 577
G + D +++ K ++I E ++LL++M++ DE + +
Sbjct: 488 EEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQW 547
Query: 578 HSAMNALRDA 587
H+A+ +L +A
Sbjct: 548 HAALVSLPNA 557
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 171/393 (43%), Gaps = 42/393 (10%)
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ ++++M G+ D+ Y ++ K + L ++ + + Y ++
Sbjct: 97 VQLFDEMTEKGLFGDAKTYGILINGLCK----ARKTGLAIKLHEKMKGNCKGDVFTYGMI 152
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
DSL K G EAL F +M GIL D +Y+SL+ +K A E FKE E +G+
Sbjct: 153 IDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGI 212
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
D V Y ++++G S R G W V
Sbjct: 213 SAD-------VYTY----------------------------NSLIHGLS-RAGLWKEVT 236
Query: 386 VYEQL-ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+ L + +G P T+ +I+ C+ +A+++ M KG + ++ Y++++
Sbjct: 237 WFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGL 296
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
G++ DA L + +G + NV+ YN L++ + + + + + +L++EM + + P
Sbjct: 297 CLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPST 356
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
V+Y T+I A ++ K + E + G + + +++ K +EE + L Q
Sbjct: 357 VTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQS 416
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQ 597
+K K + ++ ++ + AG +++ W Q
Sbjct: 417 IKKTEHKPNIEVFSILLDGMCRAG-KLEEAWKQ 448
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 131/286 (45%), Gaps = 5/286 (1%)
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK-NAKLKISDCISCA-I 370
A +LF E EKG+ D + L+ + + + E MK N K D + I
Sbjct: 96 AVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCK---GDVFTYGMI 152
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++ K A+ ++ ++I G +P V Y+S+++ CR +A + F EM+ +G
Sbjct: 153 IDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGI 212
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
V Y+S++ + G ++ W + M +G P+ + + L+D + + + ++
Sbjct: 213 SADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQ 272
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
+ + M + PD ++Y T+++ + + K + G ++ I++ +
Sbjct: 273 ILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYC 332
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
K +I+E +L ++M+ +G K Y++ + AL +G AQ L
Sbjct: 333 KDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKL 378
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 168/404 (41%), Gaps = 17/404 (4%)
Query: 82 KFDSFLHGML-----KDPQTQELAYDYYNE---AKKLPEFRPEKSTLKLLIRYLVQSKKW 133
K D F +GM+ KD T E A D ++E A LP+ S + L R+ +
Sbjct: 143 KGDVFTYGMIIDSLCKDGMTTE-ALDMFSEMIGAGILPDVVVYSSLMDGLCRF----GRL 197
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
+ ++ + + D +T + L+ RA +K L + + G F
Sbjct: 198 KEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTIL 257
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G K + E M G D Y +M +G E LF R +
Sbjct: 258 IDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGI 317
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
FS Y IL + K + EA + F +M+ KG+ Y +LI + V+
Sbjct: 318 KLNVFS---YNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRT 374
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A++LF E + G L+ + G +E+ +D+ +S+K + K + + +++
Sbjct: 375 AQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLD 434
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G + A K ++++ G P + Y +IN C + S+A K+ +M++KG
Sbjct: 435 GMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLP 494
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ ++ ++ K I +A+ L+ +M+ + P+ + + L+
Sbjct: 495 DSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 145/328 (44%), Gaps = 3/328 (0%)
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+A++ F +M EKG+ D Y LI + LA +L ++ KG + ++
Sbjct: 95 DAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKM--KGNCKGDVFTYGMI 152
Query: 337 LMYI-EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ + ++G+ + LD+ M A + + ++++G + A++ ++++ +G
Sbjct: 153 IDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGI 212
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
TY S+I+ R L+ + M +GF ++ ++ K G++ +A
Sbjct: 213 SADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQ 272
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
++ M KG EP++ YN+LM+ L KL++ + R + + SY +I+ Y
Sbjct: 273 ILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYC 332
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+ ++ D + + E R G ++G + ++ KL +M++ G L
Sbjct: 333 KDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLS 392
Query: 576 LYHSAMNALRDAGLQMQAQWLQQNFEGT 603
Y ++ L G +A L Q+ + T
Sbjct: 393 TYCVLLDGLCKNGHLEEAIDLFQSIKKT 420
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 105/264 (39%), Gaps = 12/264 (4%)
Query: 72 HHQTAVPDAKKFDSFLHGMLKDPQTQE---LAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
HH+ PD +++ ++G+ Q ++ L + KL F + +LI
Sbjct: 278 HHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF-----SYNILINGYC 332
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE-IALL 187
+ +K D L E+ + + P T + L+ + ++ + + A L T G+ + L
Sbjct: 333 KDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLS 392
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+ + G K I +++ +K + + +++ + G E+ F E
Sbjct: 393 TYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEI 452
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
L+ T Y IL + L G EA+K M+EKG L D + +I +
Sbjct: 453 SKNGLEP---DTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKE 509
Query: 308 TEVKLAEELFKEAEEKGMLRDPEV 331
E+ A +L +E + D V
Sbjct: 510 NEIHEAIQLLEEMRNRNFSPDEAV 533
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
++GF+ V +++V I DA+ L +M KG + Y L++ +A+
Sbjct: 70 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
KL ++M + D +Y +I + + + ++E G + D + ++
Sbjct: 130 LAIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ +++E ++ ++M+ G D Y+S ++ L AGL + W
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWF 238
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 163/333 (48%), Gaps = 6/333 (1%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ +L D+ G+ + EA + + E + YA LI ++ ++ AE + E +
Sbjct: 158 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 217
Query: 322 EKGMLRDPEVCLKLVLMYIE-----EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ + + + YIE +G E+ +DV + MK + K + ++N + K
Sbjct: 218 NH-HVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGK 276
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ + K+Y ++ S C P TY +++NA+ R L KAE++F ++Q+ G + V
Sbjct: 277 ASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV 336
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++++ Y + G A + + M+ GCEP+ YN ++D +GRA E +++EM+
Sbjct: 337 YNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 396
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
R + P S+ ++SAY++AR+ C E NG D + M+ ++ +L Q
Sbjct: 397 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 456
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
++ K+L +M++ D Y+ +N AG
Sbjct: 457 KMEKILAEMENGPCTADISTYNILINIYGKAGF 489
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 190/419 (45%), Gaps = 42/419 (10%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ FN + Y + Y +Y ++ + V Y +++AY G E+ + +
Sbjct: 155 VICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLV 214
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGK-SGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E ++ + +Y + L K G EA+ F+ MK Y +I +
Sbjct: 215 EMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLY 274
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
++ ++ +L+ E + P +C LV + EGL EK ++ E ++ L+
Sbjct: 275 GKASKSYMSWKLY--CEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 332
Query: 363 SDCISCAIVNGFSKRRGY-WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ A++ +S R GY + A +++ + GC P + +Y +++AY R L+S AE V
Sbjct: 333 DVYVYNALMESYS-RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 391
Query: 422 FIEMQQKGF--------------------DKC---------------VVAYSSMVAMYGK 446
F EM++ G KC +SM+ +YG+
Sbjct: 392 FEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGR 451
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G+ ++A+M+ C ++ YN L++++G+A L ++E+L+ E++ + PD V+
Sbjct: 452 LGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVT 511
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+T+ I AY+R + + C++ + E +G D A +++ S Q+E++ +L+ M
Sbjct: 512 WTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 109/229 (47%), Gaps = 4/229 (1%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++ + ++ Y A +Y QL+ +P + TYA +I AYC L +AE V +EMQ
Sbjct: 161 LIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHH 220
Query: 430 FDK---CVVAYSSMV-AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
V Y++ + + + G +A+ + +MK C+P YN +++++G+A
Sbjct: 221 VSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKS 280
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
KL+ EM + P+ +YT +++A+ R + + + + + +G D + +
Sbjct: 281 YMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNAL 340
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ +S+ ++ M+ G + D Y+ ++A AGL A+
Sbjct: 341 MESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 389
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 134/309 (43%), Gaps = 3/309 (0%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N + Y K Y + +Y +M+S + Y ++ A+ + G EK +F + +
Sbjct: 267 YNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 326
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
L+ ++Y L +S ++G + A + F M+ G D + Y ++ ++
Sbjct: 327 EDGLEP---DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 383
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
AE +F+E + G+ + + L+ Y + V K +V+ M ++ +
Sbjct: 384 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 443
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++N + + + K+ ++ + C TY +IN Y + + E++F+E+++K
Sbjct: 444 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK 503
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
F VV ++S + Y + + + +M GC P+ L+ + + QV
Sbjct: 504 NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQV 563
Query: 489 EKLWKEMER 497
+ + M +
Sbjct: 564 TSVLRTMHK 572
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/475 (20%), Positives = 218/475 (45%), Gaps = 4/475 (0%)
Query: 109 KLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKF 168
KL F P+K T L+ +S++ + + ++ + P T + L+++ R
Sbjct: 298 KLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLL 357
Query: 169 KIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
+ A L + G + + + + + G+ K + + ++E+M++ G + + +
Sbjct: 358 EDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNAL 417
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
++ + G ++ +F + K+ +P + L G++G E F++MK
Sbjct: 418 IKMHGNRGKFTEMMKVFEDIKT--FQCSP-DIVTWNTLLSVFGQNGMDSEVSGVFKEMKR 474
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
G + + + +LI S++ A ++K E G+ D ++ GL ++
Sbjct: 475 AGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQ 534
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+ V+ MK+ + K ++ C++++ ++ + + E++ S P V +++
Sbjct: 535 SEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVL 594
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+ L + E+ F+E++Q+GF + ++MV++YG+ + A ++ MK G P
Sbjct: 595 VNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTP 654
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
++ YNSLM M+ R+ N + E++ +E+ + + PD +SY TVI AY R +
Sbjct: 655 SLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVL 714
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+E R +G D + ++ S E + ++ M G K ++ Y+S ++
Sbjct: 715 SEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVD 769
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 188/402 (46%), Gaps = 40/402 (9%)
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
+YK D+ +F ++RK + + ++ LGK GR A ++ + G
Sbjct: 138 GFYKKCDT--ALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDG 195
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL-MYIEEGLV-EK 347
D Y S+I +F S + A +FK+ EE G + + ++L +Y + G+ K
Sbjct: 196 FDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVG-CKPTLITYNVILNVYGKMGMPWNK 254
Query: 348 TLDVVESMKNAKL-----KISDCISC------------------------------AIVN 372
+ +V+ MK+A + + ISC A+++
Sbjct: 255 MVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLD 314
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
+ K R A++V +++ GC P VTY S+I+AY R L A ++ +M +KG
Sbjct: 315 VYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKP 374
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
V Y+++++ + K G+ + A+ + +M+ +GC+PN+ +N+L+ MHG ++ K++
Sbjct: 375 DVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVF 434
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
++++ + +PD V++ T++S + + + E + G V +R ++ +S+
Sbjct: 435 EDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRC 494
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
++ + + + M G D Y++ + AL GL Q++
Sbjct: 495 GSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSE 536
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 218/493 (44%), Gaps = 40/493 (8%)
Query: 71 SHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLL--IRYLV 128
SH + + P + + + Q EL + + + +F E +L +L ++ L
Sbjct: 79 SHGRLSPPGQRILQTLIDPTFNLAQIDELLLELFEQQPGESDFSVESLSLDVLGIVKGLG 138
Query: 129 QSKKWDSIVSLSE---DFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EI 184
KK D+ + + E + K +L + + +++ + + A +LL DG ++
Sbjct: 139 FYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDV 198
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS-EKVAAL 243
+ A+ S + + Y ++V++KM+ G Y I+ Y K+G K+ L
Sbjct: 199 DVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGL 258
Query: 244 FLECKSRKL--DSTPFSTHM------------------------------YKILCDSLGK 271
KS + DS ++T + Y L D GK
Sbjct: 259 VDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGK 318
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
S R+ EA++ ++M+ G Y SLI ++A ++ A EL + EKG+ D
Sbjct: 319 SRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFT 378
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L+ + + G + + + E M+N K + C A++ R + +KV+E +
Sbjct: 379 YTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIK 438
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+ C P VT+ ++++ + + + S+ VF EM++ GF ++++++ Y + G
Sbjct: 439 TFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFD 498
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
AM + +M G P++ YN+++ R +Q EK+ EM+ + P++++Y +++
Sbjct: 499 QAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLL 558
Query: 512 SAYNRAREFD-MC 523
AY +E + MC
Sbjct: 559 HAYANGKEIERMC 571
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 182/441 (41%), Gaps = 56/441 (12%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLK---DPQTQELAYDYYNEAKKLPEFRPEKSTLK 121
+EL + PD + + L G K D ++ + NE K P T
Sbjct: 361 LELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCK-----PNICTFN 415
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
LI+ K+ ++ + ED K + PD T NTLL VF +
Sbjct: 416 ALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTW----------------NTLLSVFGQN 459
Query: 182 G---EIALL--------------AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
G E++ + FN+ + Y++ + + VY++M AG+ D Y
Sbjct: 460 GMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSY 519
Query: 225 CQIMEAYYKIG---DSEKVAALFLE--CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
++ A + G SEKV A + CK +L H Y +G+ E +
Sbjct: 520 NAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSL-LHAYA--------NGKEIERM 570
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKL-AEELFKEAEEKGMLRDPEVCLKLVLM 338
+ GI+E ++ + S ++ + E F E ++G D +V +
Sbjct: 571 CALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSI 630
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
Y +V K ++++ MK S +++ +S+ + + ++ +++++G P
Sbjct: 631 YGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPD 690
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
++Y ++I AYCR A +V EM++ G ++ Y++ +A Y +A+ +V
Sbjct: 691 IISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVC 750
Query: 459 KMKAKGCEPNVWIYNSLMDMH 479
M GC+PN YNS++D +
Sbjct: 751 YMIKHGCKPNQSTYNSIVDWY 771
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 91/224 (40%), Gaps = 41/224 (18%)
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
W + +L+ G I A II+ + S A + + + GFD V AY+SM
Sbjct: 152 WVRNRKESELLLNGSI-----IAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSM 206
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR-AKNLRQVEKLWKEMERRK 499
+ + GR R+A+ + KM+ GC+P + YN +++++G+ ++ L M+
Sbjct: 207 ITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAG 266
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ PD +Y T+IS R + EE
Sbjct: 267 IAPDSYTYNTLISCCRRGNLY-----------------------------------EEAA 291
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
+L++MK G D+ Y++ ++ + +A + Q EG
Sbjct: 292 GVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGN 335
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/354 (18%), Positives = 146/354 (41%), Gaps = 16/354 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T L+ Q+ + + ++ K +P+ T + L++S R F A +
Sbjct: 444 PDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAV 503
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + G L ++N+ + + ++ + V +MK + YC ++ AY
Sbjct: 504 YKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYAN 563
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKIL-----CDSLGKSGRAFEALKFFRDMKEK 288
+ E++ AL E S ++ P + + ++ CD L ++ RAF +++++
Sbjct: 564 GKEIERMCALAEEIYSGIIE--PRAVLLKTLVLVNSKCDLLMETERAF------LELRQR 615
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G D + +++ + V A E+ + G L+ MY E++
Sbjct: 616 GFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERS 675
Query: 349 LDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+++ + ++ D IS ++ + + A +V ++ G P +TY + I
Sbjct: 676 EEILREILAKGIR-PDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIA 734
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+Y +++ +A V M + G Y+S+V Y K R +A V ++
Sbjct: 735 SYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLR 788
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 212/491 (43%), Gaps = 22/491 (4%)
Query: 114 RPEKSTLKLLIRYLVQSKK------WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARK 167
RP +T +L +L++ ++ D IV+L F + VL + RL+ R RK
Sbjct: 226 RPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRK 285
Query: 168 FKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGI---VLDSGC 223
L I G + A NS + G + + + EKM I V+ G
Sbjct: 286 TNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGI 345
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH------MYKILCDSLGKSGRAFE 277
M + ++ D+ +V LE S +S S +Y L D L K GR E
Sbjct: 346 LINHMCKFRRVDDALEV----LEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQE 401
Query: 278 ALKFFRDMK-EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
L M+ +KG D Y LI F E++ +ELF E ++G+ + LV
Sbjct: 402 GLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLV 461
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
G V ++ + +K A++N F + A++++ +++ GC
Sbjct: 462 GGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCS 521
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + Y ++I+ + + + A V E+++ G V Y++++ + +T + +
Sbjct: 522 PDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEM 581
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ +M+ G +P+ YN+L+ + +L+ +K+ ++M + V P +Y VI+AY
Sbjct: 582 LKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCL 641
Query: 517 AREFDMCVKFYNEFRMNGGVI-DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+ ++ + + + V + I I++ K ++++ V L++DMK G +
Sbjct: 642 NGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTT 701
Query: 576 LYHSAMNALRD 586
Y++ LRD
Sbjct: 702 TYNAIFKGLRD 712
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/474 (20%), Positives = 196/474 (41%), Gaps = 15/474 (3%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
+D + E KL E + L+ L + ++ + L E ++ P+ T L+
Sbjct: 289 GWDLFTEMIKLGAVL-ESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILI 347
Query: 160 ASCVRARKFKIANTLLQVFITDGEIA---------LLAFNSAMGGYNKLHMYYSTILVYE 210
+ R+ A +L+ E ++ +N+ + G K+ + + E
Sbjct: 348 NHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLME 407
Query: 211 KMKSA-GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+M+S G D+ Y +++ + K G+ EK LF E + + + L +
Sbjct: 408 RMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVN---TLVGGM 464
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
++GR A+ FF + + +G+ D Y +LI +F ++ + A ELF E + G D
Sbjct: 465 CRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDA 524
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
V L+ + + G + V+ +K ++ ++ GF + + ++ ++
Sbjct: 525 IVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKE 584
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ G P +TY ++I + A+KV +M + G V Y +++ Y G
Sbjct: 585 MEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGN 644
Query: 450 IRDAMWLVAKMKAKG-CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+AM + MKA PN IYN L++ + ++ L ++M+ VTP+ +Y
Sbjct: 645 GNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYN 704
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ ++ + +F + + D I+ S + +IE L K +
Sbjct: 705 AIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFV 758
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 160/373 (42%), Gaps = 37/373 (9%)
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
LD + +T++ + L +SGR +ALK +M E +D + C T
Sbjct: 183 LDPSVKNTYLRNVWLSILLRSGRVKDALKVIDEMFESN--DDSN------CRPNDATGDI 234
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV-------------------EKTLDVV 352
L L K + +L + E+ + LVL + E G++ + D+
Sbjct: 235 LFSFLLKRERNEELLSEDEI-VNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLF 293
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
M + +++ G ++ + ++ E+++ P VT+ +IN C+
Sbjct: 294 TEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKF 353
Query: 413 ALYSKAEKVFIEM---QQKG-----FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA-K 463
A +V +M ++ G + VV Y++++ K GR ++ + L+ +M++ K
Sbjct: 354 RRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQK 413
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
GC P+ YN L+D +A + + ++L+ EM + V P+ V+ T++ R
Sbjct: 414 GCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSA 473
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
V F+ E + G D ++ F ++ E+ ++L +M G D +Y++ ++
Sbjct: 474 VNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISG 533
Query: 584 LRDAGLQMQAQWL 596
AG A ++
Sbjct: 534 FSQAGRMADASFV 546
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 185/408 (45%), Gaps = 7/408 (1%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N + G+ K+H + L+ ++MK +G+ + Y ++ + + + LF
Sbjct: 45 YNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLF---- 100
Query: 249 SRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
R++ ++ Y L L ++G EA + +M+E+G+ D Y +L+
Sbjct: 101 -RQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 159
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
++ +A ++F++ D L+ + G +++ + E M+ +
Sbjct: 160 TGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVT 219
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
A+++G K A +V E + + C P +TY+S+I+ C+ A++VF M
Sbjct: 220 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 279
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+G + VV Y+S++ + T + A+ L+ +M A GC P++ YN+L+D +
Sbjct: 280 VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAP 339
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ +L+ +M+ + PD ++Y+ +I + + DM +++ + D +V
Sbjct: 340 EANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 399
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ +++ +LL++M + D Y S ++ G ++A+
Sbjct: 400 EGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEAR 447
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 224/514 (43%), Gaps = 17/514 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + + +HG + + + AY + + + P T L+ L ++ D
Sbjct: 75 PNVVTYSTVIHGFCRQTKV-DTAYKLFRQMVE-NGCMPNLVTYNTLLSGLCRNGLMDEAY 132
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF--ITDGEIA--LLAFNSAM 193
L ++ + + PD + L+A + K +A L+VF ++G+ ++A+++ +
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMA---LKVFEDNSNGDCPPDVVAYSTLI 189
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G K ++EKM+ D + +M+ K GD + A LE + +
Sbjct: 190 AGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCK-GDRLQEAQQVLETMEDR-N 247
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
TP + Y L D L K+G+ +A + F+ M +GI + Y SLI F V A
Sbjct: 248 CTP-NVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 306
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI--SCAIV 371
L +E G L D L+ + G + + MK AK D I SC ++
Sbjct: 307 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK-AKFCNPDVITYSC-LI 364
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
GF K A +++ ++ Q +P VT+++++ YC L AE++ EM
Sbjct: 365 GGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCS 424
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
V Y+S+V + K GR+ +A ++ +M +GC+PNV Y +L+D RA KL
Sbjct: 425 PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKL 484
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF-RMNGGVIDRAIAGIMVGVFS 550
+EM V P+ ++Y ++I + + + K R D +M+
Sbjct: 485 LEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLC 544
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ ++ ++LL+ +K GT +Y + + L
Sbjct: 545 RTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL 578
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 162/370 (43%), Gaps = 70/370 (18%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ I+ D L K+ R EA +F MK+KG + + Y LI F + +V A L KE +
Sbjct: 10 WTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK 69
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E G+ + V+ Y +++GF ++
Sbjct: 70 ESGLAPN-------VVTY----------------------------STVIHGFCRQTKVD 94
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF--DK------- 432
A K++ Q++ GC+P VTY ++++ CR L +A ++ EM+++G DK
Sbjct: 95 TAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLM 154
Query: 433 ---C-----------------------VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
C VVAYS+++A KTGR+ +A L KM+ CE
Sbjct: 155 AGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCE 214
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+V + +LMD + L++ +++ + ME R TP+ ++Y+++I + + +
Sbjct: 215 PDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV 274
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ + G + ++ F + ++ + L+++M + G D Y++ ++ L
Sbjct: 275 FKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCK 334
Query: 587 AGLQMQAQWL 596
G +A L
Sbjct: 335 TGRAPEANRL 344
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 162/396 (40%), Gaps = 19/396 (4%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+ KMK G V + Y ++ + K+ KV +L K K + Y +
Sbjct: 30 FAKMKKKGTVPNEWTYNVLINGFCKV---HKVHRAYLLLKEMKESGLAPNVVTYSTVIHG 86
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
+ + A K FR M E G + + Y +L+ + A EL E E+G+ D
Sbjct: 87 FCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPD 146
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ + G ++ L V E N ++ G K A K++E
Sbjct: 147 KFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFE 206
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ C P VT+ ++++ C+ +A++V M+ + V+ YSS++ KTG
Sbjct: 207 KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTG 266
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
++RDA + +M +G EPNV YNSL+ + L +EM PD ++Y
Sbjct: 267 QVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYN 326
Query: 509 TVISAY---NRAREF-----DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
T+I RA E DM KF N D ++G F KL +I+
Sbjct: 327 TLIDGLCKTGRAPEANRLFGDMKAKFCNP--------DVITYSCLIGGFCKLERIDMART 378
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
L DM + D + + + +AGL A+ L
Sbjct: 379 LFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERL 414
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 111/233 (47%), Gaps = 2/233 (0%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++G K A + ++ +G +P + TY +IN +C++ +A + EM++ G
Sbjct: 13 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
VV YS+++ + + ++ A L +M GC PN+ YN+L+ R + +
Sbjct: 73 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGV 548
+L EM R + PDK SY T+++ + + DM +K + E NG +A ++
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVF-EDNSNGDCPPDVVAYSTLIAG 191
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
K +++E KL + M+ + D + + M+ L +AQ + + E
Sbjct: 192 LCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+K V+ ++ M+ K R+ +A AKMK KG PN W YN L++ + + +
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L KEM+ + P+ V+Y+TVI + R + D K + + NG + + ++
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG-LQMQAQWLQQNFEG 602
+ ++E +LL +M+ G + D+ Y + M L G + M + + N G
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 176
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/520 (21%), Positives = 218/520 (41%), Gaps = 80/520 (15%)
Query: 144 KIYNVLPDAHTCSRLVASCVRARKFKIANTL----------------------------L 175
K++N LP + C+ L+ V+ R+ + A+ L L
Sbjct: 161 KLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCL 220
Query: 176 QVFITDGEIALLA-------------FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSG 222
+ I DG I L+ +N+ + GY K S +++K+K G +
Sbjct: 221 KGRIEDG-IKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQ 279
Query: 223 CYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFF 282
+ ++ + K+G E + L LE K R L + MY + D+ K G +A
Sbjct: 280 TFGSLVNGFCKMGMFEAIDLLLLEMKDRGLS---VNVQMYNNIIDARYKLGFDIKAKDTL 336
Query: 283 RDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
++M E D Y +LI F S EV+ AE+L ++ +G+ + LV Y ++
Sbjct: 337 KEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQ 396
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFS---------------KRRGYWAAVKVY 387
G K D + M + L++ A+++G RG +Y
Sbjct: 397 GEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIY 456
Query: 388 E--------------------QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+++ Q P YA++++ + R +A+K+F + +
Sbjct: 457 NVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIE 516
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
KG D VV Y+ M+ + K+G + +A+ + KM+ P+++ +++++D + + N+
Sbjct: 517 KGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNA 576
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
V K++ M ++ P+ V+YT++I+ Y R E M K ++ R +G I++G
Sbjct: 577 VLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIG 636
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
F K +++ + V + M ++ +H +N +
Sbjct: 637 SFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNT 676
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 142/303 (46%), Gaps = 10/303 (3%)
Query: 294 PSIYA--SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK------LVLMYIEEGLV 345
PS YA SL+ ++ A +L+ E ++ ++C+ +V +G +
Sbjct: 167 PSTYACNSLLNLLVKHRRIETAHQLYDEMIDRD--NGDDICVDNYTTSIMVKGLCLKGRI 224
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
E + ++ES + +++G+ K+ +A K++++L +G IP T+ S+
Sbjct: 225 EDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSL 284
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
+N +C++ ++ + + +EM+ +G V Y++++ K G A + +M C
Sbjct: 285 VNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCC 344
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
EP++ YN+L++ + + EKL ++ RR + P+K++YT ++ Y + E+
Sbjct: 345 EPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATD 404
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
+ E +G +D G ++ +++ + + M + G D +Y+ MN L
Sbjct: 405 YLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLF 464
Query: 586 DAG 588
G
Sbjct: 465 KKG 467
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/462 (19%), Positives = 184/462 (39%), Gaps = 44/462 (9%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VP+ +++ + G K + E AY + + K + F P T L+ + +++I
Sbjct: 240 VPNIVFYNTLIDGYCKKGEV-ESAYKLFKKLK-MKGFIPTLQTFGSLVNGFCKMGMFEAI 297
Query: 137 ---------VSLSEDFKIYNVLPDAH-----------TCSRLVASCVRARKFKIANTLLQ 176
LS + ++YN + DA T + +C NTL+
Sbjct: 298 DLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEP-DLVTYNTLIN 356
Query: 177 VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
F + GE+ + E+ G+ + Y ++ Y K G+
Sbjct: 357 HFCSRGEVE------------------EAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGE 398
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
K +E + L+ S Y L L +G AL M +GIL D +I
Sbjct: 399 YTKATDYLIEMSTSGLEVDMIS---YGALIHGLVVAGEVDTALTIRDRMMNRGILPDANI 455
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y L+ ++ +A+ + E ++ + D V LV +I G +++ + + +
Sbjct: 456 YNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLII 515
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
L ++ GFSK A+ +++ +P T+++II+ Y + +
Sbjct: 516 EKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMN 575
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
K+F M ++ VV Y+S++ Y + G + A L + M++ G +P+V Y+ L+
Sbjct: 576 AVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILI 635
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+ L + ++ M K TP+ ++ +++ + +
Sbjct: 636 GSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTK 677
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 200/452 (44%), Gaps = 39/452 (8%)
Query: 85 SFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFK 144
+FL G+ K + ++ + L +P +LIR L++S + D +
Sbjct: 310 AFLSGLCKSGKIEQAFEACRTMQESLSSSQP---VYDMLIRLLIESGRIDKAEEACLEIA 366
Query: 145 IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYS 204
N+ P + TC ++ +A + A +LL+ I G +A +S
Sbjct: 367 GRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHS------------- 413
Query: 205 TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKI 264
+L+ E K+ D + A FL+ RK+ S S Y
Sbjct: 414 -MLINELCKA---------------------DKIQEAQEFLQGMDRKISSRSSSCFSYNS 451
Query: 265 LCDSLGKSGRAFEALKFFRDM-KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
L +SL K+ + +A F M E+ + D Y+ LI F I E+ AE+L+K+ +
Sbjct: 452 LLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDL 511
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
+ + + + +G + V E M A +++GFS R + A
Sbjct: 512 NCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQA 571
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+++E +IS+GC P VTY +++ C+ + +A ++F +M ++G D V Y++++
Sbjct: 572 HELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYG 631
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+ G+I A+ + +M +KG +P+V YN L+ RA + ++L++ M R+ PD
Sbjct: 632 FCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPD 691
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
VS+ +I ++A+ D V+ + + G
Sbjct: 692 TVSHNIMIDGLSKAKRLDDAVEVFERMEQDHG 723
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 156/363 (42%), Gaps = 20/363 (5%)
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
G +K LE R + + + H + L K+GR AL M ++G D
Sbjct: 353 GRIDKAEEACLEIAGRNIQPSSGTCHS---VIQELCKAGRVDSALSLLETMIKRGYCPDM 409
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY-------IEEGLVEK 347
+ ++ LI +++ A+E + GM R Y + V +
Sbjct: 410 ATHSMLINELCKADKIQEAQEFLQ-----GMDRKISSRSSSCFSYNSLLNSLCKAKKVHQ 464
Query: 348 TLDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ +M + + + D +S +I ++GF K A K+Y+Q+I C+P TY + +
Sbjct: 465 AFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFL 524
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
N R + A+ V+ EM G V+ YS+++ + + A L M ++GC
Sbjct: 525 NGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCR 584
Query: 467 PNVWIYNSLMDMHGRAKNLR--QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
PN YN L +HG K + + +L+++M R PD+V+YTT++ + + + V
Sbjct: 585 PNAVTYNCL--LHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAV 642
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ ++E G D ++ F + + E +L Q M S K D ++ ++ L
Sbjct: 643 EVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGL 702
Query: 585 RDA 587
A
Sbjct: 703 SKA 705
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 177/429 (41%), Gaps = 41/429 (9%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++ M +G D+ Y ++ A+ K+ + ++ LFLE P + +
Sbjct: 256 LFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVE--SKAPLNNVAWTAFLS 313
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L KSG+ +A + R M+E P +Y LI + AEE E + +
Sbjct: 314 GLCKSGKIEQAFEACRTMQESLSSSQP-VYDMLIRLLIESGRIDKAEEACLEIAGRNIQP 372
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNA--------------KLKISDCISCA---- 369
C ++ + G V+ L ++E+M +L +D I A
Sbjct: 373 SSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFL 432
Query: 370 -------------------IVNGFSKRRGYWAAVKVYEQLISQ-GCIPGQVTYASIINAY 409
++N K + A ++ ++S+ +P V+Y+ +I+ +
Sbjct: 433 QGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGF 492
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+I +AEK++ +M V Y++ + + GRI DA + +M A GC P+V
Sbjct: 493 CKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDV 552
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
Y++L+ A+ Q +L++ M R P+ V+Y ++ + + D + + +
Sbjct: 553 ITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRK 612
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
G DR ++ F + +IE+ V++ +M S+G D Y+ + AG
Sbjct: 613 MVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGK 672
Query: 590 QMQAQWLQQ 598
+A+ L Q
Sbjct: 673 PGEAKQLFQ 681
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 96/494 (19%), Positives = 184/494 (37%), Gaps = 111/494 (22%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+EKM + G+V + Y ++++ +S++ F E + P ST +Y+ + +
Sbjct: 151 VFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGF--KPSST-LYQKVTE 207
Query: 268 SL---GKSG--------------------------------RAFEALKFFRDMKEKGILE 292
L GK G +A EA K FR M + G
Sbjct: 208 CLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKP 267
Query: 293 DPSIYASLICSFASITEVKLAEELFKE--AEEKGMLRDP-------------------EV 331
D +IY+ ++ + + + A +LF E E K L + E
Sbjct: 268 DATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEA 327
Query: 332 CLK--------------LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK- 376
C L+ + IE G ++K + + ++ S +++ K
Sbjct: 328 CRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKA 387
Query: 377 --------------RRGYWAAVKVYEQLISQGCIPGQV---------------------- 400
+RGY + + LI++ C ++
Sbjct: 388 GRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCF 447
Query: 401 TYASIINAYCRIALYSKAEKVFIEM-QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
+Y S++N+ C+ +A +F M ++ F VV+YS ++ + K + A L +
Sbjct: 448 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQ 507
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M C PNV YN+ ++ R + + +++EM +PD ++Y+T+I ++ AR+
Sbjct: 508 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARK 567
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
D + + G + ++ K S+ +E +L + M G D Y +
Sbjct: 568 HDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTT 627
Query: 580 AMNALRDAGLQMQA 593
+ + G QA
Sbjct: 628 LLYGFCNVGKIEQA 641
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 36/180 (20%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++ + R A +V+E++++QG +P TYA ++ + C +A + F EM KG
Sbjct: 135 LLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKG 194
Query: 430 FDKCVVAYSSMVAMYGKTGR-------------------------------IRD----AM 454
F Y + TG+ I+D A
Sbjct: 195 FKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEAS 254
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP-DKVSYTTVISA 513
L M GC+P+ IY+ ++ H + +NL + KL+ EM P + V++T +S
Sbjct: 255 KLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSG 314
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 44/78 (56%)
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+A+ ++A+ + +V+ YN L+D R ++L+Q +++++M + V P+ +Y ++
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171
Query: 512 SAYNRAREFDMCVKFYNE 529
+ R D V+F+ E
Sbjct: 172 QSSCYERNSDEAVRFFGE 189
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 165/366 (45%), Gaps = 3/366 (0%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
M+ G+ D+ Y ++ + K+G+ LF E + +K+ + Y + + K
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVT---YTSVIHGICK 394
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
SG+ EA + F +M KG+ D Y +LI + E+K A + + +KG+ +
Sbjct: 395 SGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVT 454
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L + G ++ +++ M L+ + IVNG K VK+ E++
Sbjct: 455 YTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMD 514
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
G P +TY ++++AYC++ +KA ++ M K +V ++ ++ + +G +
Sbjct: 515 LAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLE 574
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
D L+ M KG PN +NSLM + N+R +++K M R V PD +Y +I
Sbjct: 575 DGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILI 634
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+ +AR + E G + A ++ F K + E KL ++M+ G
Sbjct: 635 KGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLV 694
Query: 572 LDERLY 577
++ +Y
Sbjct: 695 AEKDIY 700
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 135/287 (47%), Gaps = 38/287 (13%)
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+IG+ +KV L E K + L ++Y + L K+G EA + R M++ G+
Sbjct: 289 RIGELDKVLKLVDELKGKGLKP---DEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFP 345
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
D +Y ++I F + V A +LF E K ++ D ++ Y
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPD-------IVTY------------- 385
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
++++G K A +++ +++ +G P +VTY ++I+ YC+
Sbjct: 386 ---------------TSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKA 430
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+A V +M QKG VV Y+++ K G I A L+ +M KG +PNV+ Y
Sbjct: 431 GEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTY 490
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
N++++ + N+ Q KL +EM+ PD ++YTT++ AY + E
Sbjct: 491 NTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGE 537
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 153/326 (46%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
I+ L + G+ EA M ++G D Y ++ + I E+ +L E + K
Sbjct: 247 IVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGK 306
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G+ D + ++L+ + G V + ++ M+ + + + +++GF K AA
Sbjct: 307 GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAA 366
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
K+++++ + +P VTY S+I+ C+ +A ++F EM KG + V Y++++
Sbjct: 367 CKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDG 426
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
Y K G +++A + +M KG PNV Y +L D + + +L EM R+ + P+
Sbjct: 427 YCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPN 486
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+Y T+++ + + VK E + G D ++ + K+ ++ + +LL+
Sbjct: 487 VYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLR 546
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGL 589
M ++ + ++ MN +G+
Sbjct: 547 IMLNKRLQPTLVTFNVLMNGFCMSGM 572
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 149/319 (46%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
A+K F + E G+ + ++ + +V+ A L + ++G D +V
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
Y G ++K L +V+ +K LK + I I+ K A ++ + G P
Sbjct: 286 GYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFP 345
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
V Y ++I+ +C++ S A K+F EM++K +V Y+S++ K+G++ +A +
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMF 405
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+M KG EP+ Y +L+D + +A +++ + +M ++ +TP+ V+YT + +
Sbjct: 406 NEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKN 465
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
E D+ + +E G + +V K+ IE+ VKL+++M G D Y
Sbjct: 466 GEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITY 525
Query: 578 HSAMNALRDAGLQMQAQWL 596
+ M+A G +A L
Sbjct: 526 TTLMDAYCKMGEMAKAHEL 544
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 177/416 (42%), Gaps = 4/416 (0%)
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSA 192
D ++ L ++ K + PD + + ++ + + A LL+ G + + +
Sbjct: 294 DKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTV 353
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G+ KL + ++++M+ IV D Y ++ K G + +F E + L
Sbjct: 354 ISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGL 413
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
+ + Y L D K+G EA M +KG+ + Y +L E+ +
Sbjct: 414 EPDEVT---YTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDV 470
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A EL E KG+ + +V + G +E+T+ ++E M A +++
Sbjct: 471 ANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMD 530
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
+ K A ++ ++++ P VT+ ++N +C + E++ M +KG
Sbjct: 531 AYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMP 590
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
++S++ Y +R + M +G P+ YN L+ H +A+N+++ L
Sbjct: 591 NATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLH 650
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
KEM + + +Y +I + + ++F K + E R +G V ++ I I V V
Sbjct: 651 KEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDV 706
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 106/215 (49%)
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
G AVKV+E+ G V+ +++ C++ +A + ++M +G VV+Y
Sbjct: 222 GIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYG 281
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+V+ Y + G + + LV ++K KG +P+ +IYN+++ + + + + E+L + M +
Sbjct: 282 VVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKW 341
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
V PD V YTTVIS + + K ++E R V D ++ K ++ E
Sbjct: 342 GVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEA 401
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
++ +M +G + DE Y + ++ AG +A
Sbjct: 402 REMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEA 436
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/481 (20%), Positives = 203/481 (42%), Gaps = 33/481 (6%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P K T +LI L + K+ + SL + V D HT S L+ ++ R A L
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ ++ G I ++ + +K + +++ M ++G++ + Y ++E Y +
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394
Query: 234 IGDSEKVAALFLECKSRKLDSTPFS--------------------------------THM 261
+ + L +E K R + +P++ +
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI 454
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L + ++ R +A++ ++MKE+GI D Y SLI + + A E
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E G+ + + YIE V+ M+ + + + ++N + K+
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A Y ++ QG + TY ++N + AE++F EM+ KG V +Y ++
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ K G ++ A + +M +G PNV IYN L+ R+ + + ++L EM + +
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ V+Y T+I Y ++ + + ++E ++ G V D + +V +L+ +E + +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 562 L 562
Sbjct: 755 F 755
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 122/528 (23%), Positives = 218/528 (41%), Gaps = 41/528 (7%)
Query: 80 AKKFDSFLHGMLKDPQTQELAYDYYNEAKKL------PEFRPEKSTLKLLIRYLVQSKKW 133
K D L G+L D +A +Y EA + E P S K+L+ L++ +
Sbjct: 146 GKSDDGVLFGILFDGY---IAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRL 202
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM 193
D + + NV+ D T L+ + RA ++ +L F T+ E N +
Sbjct: 203 DLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL--FKTEKEFRTATLN--V 258
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G KL E M G+V Y +++ KI E +L +E S
Sbjct: 259 DGALKLK---------ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSL--- 306
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
H Y +L D L K A A +M GI P +Y IC + ++ A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+ LF G++ + L+ Y E V + +++ MK + IS +V G
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
A + +++I+ GC P V Y ++I + + + + A +V EM+++G
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ Y+S++ K R+ +A + +M G +PN + Y + + + A +K K
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK 546
Query: 494 EMERRKVTPDKVSYTTVISAY-NRAREFDMCVKFYNEFRMNGGVIDRAIAG-------IM 545
EM V P+KV T +I+ Y + + + C + + ++D+ I G +M
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS-------MVDQGILGDAKTYTVLM 599
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G+F K ++++ ++ ++M+ +G D Y +N G +A
Sbjct: 600 NGLF-KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/442 (18%), Positives = 187/442 (42%), Gaps = 46/442 (10%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP LI+ +Q+ ++ + + ++ K + PD + L+ +A++ A +
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L + +G + + + + GY + + S ++M+ G++ + ++ Y
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K G + + + +S Y +L + L K+ + +A + FR+M+ KGI
Sbjct: 569 KKGKVIEACSAY---RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLD 350
D Y LI F+ + ++ A +F E E+G+ P V + +L+ + G +EK +
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL--TPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+++ M L + C I++G+ K A ++++++ +G +P Y ++++ C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 411 RIALYSKAEKVF--------------------------IEMQQKGFDKCV---------- 434
R+ +A +F E++ + ++ +
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 435 --VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
V Y+ M+ K G + A L +M+ P V Y SL++ + + ++ ++
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 493 KEMERRKVTPDKVSYTTVISAY 514
E + PD + Y+ +I+A+
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAF 885
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 188/451 (41%), Gaps = 28/451 (6%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR-----PEKSTLKLLIRYLVQSKK 132
P+A + +F+ G ++ A ++ + K + E R P K LI + K
Sbjct: 520 PNAFTYGAFISGYIE-------ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFN 190
S +L DA T + L+ + K A + + G IA + ++
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFSYG 631
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ G++KL ++++M G+ + Y ++ + + G+ EK L E +
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
L + Y + D KSG EA + F +MK KG++ D +Y +L+ + +V
Sbjct: 692 GLHPNAVT---YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL----KISDCI 366
+ A +F +KG L+ + G E +V+ + + K +D
Sbjct: 749 ERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
+++ K AA +++ Q+ + +P +TY S++N Y ++ ++ VF E
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK-----GCEPNVWIYNSLMDMHGR 481
G + + YS ++ + K G A+ LV +M AK GC+ ++ +L+ +
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
+ EK+ + M R + PD + +I+
Sbjct: 928 VGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 152/385 (39%), Gaps = 47/385 (12%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
R Q + DAK + ++G+ K+ + + A + + E + P+ + +LI
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDD-AEEIFREMRG-KGIAPDVFSYGVLINGFS 638
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALL 187
+ S+ ++ + P+ + L+ R+ + + A LL G +
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+ + + GY K ++++MK G+V DS Y +++ ++ D E+ +F
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758
Query: 248 KSRKLDST-PFSTHM----------------------------------YKILCDSLGKS 272
K ST PF+ + Y I+ D L K
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
G A + F M+ ++ Y SL+ + + +F EA G+ D +
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMY 878
Query: 333 LKLVLMYIEEGLVEKTLDVVESM--KNA-----KLKISDCISCAIVNGFSKRRGYWAAVK 385
++ +++EG+ K L +V+ M KNA KL IS C A+++GF+K A K
Sbjct: 879 SVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR--ALLSGFAKVGEMEVAEK 936
Query: 386 VYEQLISQGCIPGQVTYASIINAYC 410
V E ++ IP T +IN C
Sbjct: 937 VMENMVRLQYIPDSATVIELINESC 961
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/481 (20%), Positives = 203/481 (42%), Gaps = 33/481 (6%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P K T +LI L + K+ + SL + V D HT S L+ ++ R A L
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ ++ G I ++ + +K + +++ M ++G++ + Y ++E Y +
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394
Query: 234 IGDSEKVAALFLECKSRKLDSTPFS--------------------------------THM 261
+ + L +E K R + +P++ +
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI 454
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L + ++ R +A++ ++MKE+GI D Y SLI + + A E
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E G+ + + YIE V+ M+ + + + ++N + K+
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A Y ++ QG + TY ++N + AE++F EM+ KG V +Y ++
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ K G ++ A + +M +G PNV IYN L+ R+ + + ++L EM + +
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ V+Y T+I Y ++ + + ++E ++ G V D + +V +L+ +E + +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 562 L 562
Sbjct: 755 F 755
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 122/528 (23%), Positives = 217/528 (41%), Gaps = 41/528 (7%)
Query: 80 AKKFDSFLHGMLKDPQTQELAYDYYNEAKKL------PEFRPEKSTLKLLIRYLVQSKKW 133
K D L G+L D +A Y EA + E P S K+L+ L++ +
Sbjct: 146 GKSDDGVLFGILFDGY---IAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRL 202
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM 193
D + + NV+ D T L+ + RA ++ +L F T+ E N +
Sbjct: 203 DLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL--FKTEKEFRTATLN--V 258
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G KL E M G+V Y +++ KI E +L +E S
Sbjct: 259 DGALKLK---------ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSL--- 306
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
H Y +L D L K A A +M GI P +Y IC + ++ A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+ LF G++ + L+ Y E V + +++ MK + IS +V G
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
A + +++I+ GC P V Y ++I + + + + A +V EM+++G
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ Y+S++ K R+ +A + +M G +PN + Y + + + A +K K
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK 546
Query: 494 EMERRKVTPDKVSYTTVISAY-NRAREFDMCVKFYNEFRMNGGVIDRAIAG-------IM 545
EM V P+KV T +I+ Y + + + C + + ++D+ I G +M
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS-------MVDQGILGDAKTYTVLM 599
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G+F K ++++ ++ ++M+ +G D Y +N G +A
Sbjct: 600 NGLF-KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/442 (18%), Positives = 187/442 (42%), Gaps = 46/442 (10%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP LI+ +Q+ ++ + + ++ K + PD + L+ +A++ A +
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L + +G + + + + GY + + S ++M+ G++ + ++ Y
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K G + + + +S Y +L + L K+ + +A + FR+M+ KGI
Sbjct: 569 KKGKVIEACSAY---RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLD 350
D Y LI F+ + ++ A +F E E+G+ P V + +L+ + G +EK +
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL--TPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+++ M L + C I++G+ K A ++++++ +G +P Y ++++ C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 411 RIALYSKAEKVF--------------------------IEMQQKGFDKCV---------- 434
R+ +A +F E++ + ++ +
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 435 --VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
V Y+ M+ K G + A L +M+ P V Y SL++ + + ++ ++
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 493 KEMERRKVTPDKVSYTTVISAY 514
E + PD + Y+ +I+A+
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAF 885
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 188/451 (41%), Gaps = 28/451 (6%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR-----PEKSTLKLLIRYLVQSKK 132
P+A + +F+ G ++ A ++ + K + E R P K LI + K
Sbjct: 520 PNAFTYGAFISGYIE-------ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFN 190
S +L DA T + L+ + K A + + G IA + ++
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFSYG 631
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ G++KL ++++M G+ + Y ++ + + G+ EK L E +
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
L + Y + D KSG EA + F +MK KG++ D +Y +L+ + +V
Sbjct: 692 GLHPNAVT---YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL----KISDCI 366
+ A +F +KG L+ + G E +V+ + + K +D
Sbjct: 749 ERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
+++ K AA +++ Q+ + +P +TY S++N Y ++ ++ VF E
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK-----GCEPNVWIYNSLMDMHGR 481
G + + YS ++ + K G A+ LV +M AK GC+ ++ +L+ +
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
+ EK+ + M R + PD + +I+
Sbjct: 928 VGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 152/385 (39%), Gaps = 47/385 (12%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
R Q + DAK + ++G+ K+ + + A + + E + P+ + +LI
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDD-AEEIFREMRG-KGIAPDVFSYGVLINGFS 638
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALL 187
+ S+ ++ + P+ + L+ R+ + + A LL G +
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+ + + GY K ++++MK G+V DS Y +++ ++ D E+ +F
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758
Query: 248 KSRKLDST-PFSTHM----------------------------------YKILCDSLGKS 272
K ST PF+ + Y I+ D L K
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
G A + F M+ ++ Y SL+ + + +F EA G+ D +
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMY 878
Query: 333 LKLVLMYIEEGLVEKTLDVVESM--KNA-----KLKISDCISCAIVNGFSKRRGYWAAVK 385
++ +++EG+ K L +V+ M KNA KL IS C A+++GF+K A K
Sbjct: 879 SVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR--ALLSGFAKVGEMEVAEK 936
Query: 386 VYEQLISQGCIPGQVTYASIINAYC 410
V E ++ IP T +IN C
Sbjct: 937 VMENMVRLQYIPDSATVIELINESC 961
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/506 (20%), Positives = 222/506 (43%), Gaps = 9/506 (1%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A D + ++ +P + L+ L++S KWD S F+ + P+ T + L+
Sbjct: 72 ALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILI 131
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
R ++F A LL G + ++ + + K + ++++M G+
Sbjct: 132 KISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVT 191
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
D CY +++ ++K GD + ++ + K S + Y ++ + L K G+ E+
Sbjct: 192 PDVACYNILIDGFFKKGDILNASEIWE--RLLKGPSVYPNIPSYNVMINGLCKCGKFDES 249
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+ + MK+ +D Y++LI + A ++KE E G+ D V ++
Sbjct: 250 FEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNG 309
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
Y+ G +E+ L++ + M+ + + ++ G + A+ ++E L + C
Sbjct: 310 YLRAGRIEECLELWKVMEKEGCRTVVSYNI-LIRGLFENAKVDEAISIWELLPEKDCCAD 368
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+TY +++ C+ +KA + E + D AYSSM+ + GR+ + ++
Sbjct: 369 SMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLD 428
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M GC+PN ++ N++++ RA L + + M + P V+Y T+I+ ++A
Sbjct: 429 QMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 488
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
F E G + +++ + +++ + L +G K D ++++
Sbjct: 489 RFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 548
Query: 579 SAMNALRDAG-----LQMQAQWLQQN 599
++ L +G LQ+ ++ Q+N
Sbjct: 549 IIIHGLCSSGKVEDALQLYSEMKQRN 574
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 169/396 (42%), Gaps = 41/396 (10%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY++M G+ D Y ++ Y + G E+ L+ + ++ T S Y IL
Sbjct: 287 VYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW-KVMEKEGCRTVVS---YNILIR 342
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L ++ + EA+ + + EK D Y L+ + A + +EAE
Sbjct: 343 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 402
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D ++ EG +++ V++ M K + + A++NGF + A++ +
Sbjct: 403 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFF 462
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM------- 440
++S+GC P VTY ++IN + +S+A + EM QKG+ ++ YS +
Sbjct: 463 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQG 522
Query: 441 --------------------------VAMYG--KTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+ ++G +G++ DA+ L ++MK + C PN+ +
Sbjct: 523 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTH 582
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N+LM+ + ++ + K+W + + + PD +SY + V F N+ +
Sbjct: 583 NTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLND-AV 641
Query: 533 NGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKS 567
+ GV+ AI I+V + L E V + MK
Sbjct: 642 DRGVLPTAITWNILVQGYLALKGYMEPVFVPASMKG 677
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/391 (20%), Positives = 156/391 (39%), Gaps = 15/391 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTL--KLLIRYLVQSKKWDS 135
PD +++ L+G L+ + +E E K+ E ++ + +LIR L ++ K D
Sbjct: 298 PDVVVYNTMLNGYLRAGRIEECL-----ELWKVMEKEGCRTVVSYNILIRGLFENAKVDE 352
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFNSAMG 194
+S+ E + D+ T LV C K + L + G++ A++S +
Sbjct: 353 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 412
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
G + V ++M G + ++ + + E F S+
Sbjct: 413 GLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 472
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
T + Y L + L K+ R EA ++M +KG + Y+ L+ ++ +A
Sbjct: 473 TVVT---YNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMAL 529
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
L+ +A EKG P+V + ++++ G VE L + MK + ++
Sbjct: 530 NLWCQALEKGF--KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLME 587
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
GF K R + A K+++ ++ G P ++Y + C S A + +G
Sbjct: 588 GFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLP 647
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
+ ++ +V Y + +++ A MK
Sbjct: 648 TAITWNILVQGYLALKGYMEPVFVPASMKGN 678
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 170/383 (44%), Gaps = 22/383 (5%)
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
Y V +M G + D+ Y +++ E LF E K L + ++
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYT--- 520
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y I+ DS K+G +A K+F +M+E G + Y +LI ++ +V A ELF+
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC---------------- 365
+G L + L+ + + G +EK + E M +K + D
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSK-DVPDVDMYFKQYDDDNSERPN 639
Query: 366 --ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I A+++GF K A K+ + + +GC P Q+ Y ++I+ C++ +A++V
Sbjct: 640 VVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKA 699
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM + GF + YSS++ Y K R A +++KM C PNV IY ++D +
Sbjct: 700 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 759
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ KL + ME + P+ V+YT +I + R + + C++ G +
Sbjct: 760 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYR 819
Query: 544 IMVGVFSKLSQIEELVKLLQDMK 566
+++ K ++ LL++MK
Sbjct: 820 VLIDHCCKNGALDVAHNLLEEMK 842
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 123/572 (21%), Positives = 244/572 (42%), Gaps = 104/572 (18%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
FRP +ST LI+ +++ DS + + + N+ D T S + K++ A
Sbjct: 231 FRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREAL 290
Query: 173 TLLQV--FITD---------GEIALLAFNSAMGGYNKLH--------MYYSTILV----Y 209
TL++ F+ D G F AM N++ + YST+L
Sbjct: 291 TLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNK 350
Query: 210 EKMKSAGIVLD----SGCYC------QIMEAY---------YKI---------------- 234
+++ VL+ GCY ++ AY YK+
Sbjct: 351 KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVY 410
Query: 235 --------GDSEKVAALFLECKSR-------------KLDSTPFSTHMYKILCDSLGKSG 273
GD + ++ LE + K++ + F+ + LC S GK
Sbjct: 411 NILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFT----RCLC-SAGKYE 465
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
+AF + R+M +G + D S Y+ ++ + ++++LA LF+E + G++ D
Sbjct: 466 KAFSVI---REMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ 393
+V + + GL+E+ M+ + A+++ + K + A +++E ++S+
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVF-----------IEMQQKGFD------KCVVA 436
GC+P VTY+++I+ +C+ KA ++F ++M K +D VV
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVI 642
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y +++ + K R+ +A L+ M +GCEPN +Y++L+D + L + +++ EM
Sbjct: 643 YGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMS 702
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+Y+++I Y + + D+ K ++ N + I M+ K+ + +
Sbjct: 703 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 762
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E KL+Q M+ +G + + Y + ++ G
Sbjct: 763 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIG 794
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 202/490 (41%), Gaps = 60/490 (12%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA- 171
F P+ ST ++ YL + K + L E+ K ++ D +T + +V S +A + A
Sbjct: 479 FIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 172 ---NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
N + +V T ++ + + + Y K ++E M S G + + Y ++
Sbjct: 539 KWFNEMREVGCTPN---VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 229 EAYYKIGDSEKVAALFLE-CKSRKL-------------DSTPFSTHMYKILCDSLGKSGR 274
+ + K G EK +F C S+ + +S + +Y L D K R
Sbjct: 596 DGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHR 655
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
EA K M +G + +Y +LI + ++ A+E+ E E G P
Sbjct: 656 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGF---PAT--- 709
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
+Y L+++ V KR+ A KV +++
Sbjct: 710 ---LYTYSSLIDRYFKV------------------------KRQDL--ASKVLSKMLENS 740
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
C P V Y +I+ C++ +A K+ M++KG VV Y++M+ +G+ G+I +
Sbjct: 741 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCL 800
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L+ +M +KG PN Y L+D + L L +EM++ Y VI +
Sbjct: 801 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF 860
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
N +EF + +E + ++ ++V K ++E ++LL+++ + L +
Sbjct: 861 N--KEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVD 918
Query: 575 RLYHSAMNAL 584
Y S N+L
Sbjct: 919 --YSSTYNSL 926
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 98/236 (41%), Gaps = 7/236 (2%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++G + + A+ ++ + C+P VTY++++ + ++V M +G
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 367
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN----- 484
++S+V Y +G A L+ KM G P +YN L+ K+
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCH 427
Query: 485 -LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
L EK + EM V +K++ ++ A +++ E G + D +
Sbjct: 428 LLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA-QWLQQ 598
++G S++E L ++MK G D Y +++ AGL QA +W +
Sbjct: 488 KVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 182/388 (46%), Gaps = 8/388 (2%)
Query: 210 EKMKSAGIV-LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
++M GIV + Y ++ AY D + V + K + + FS Y IL
Sbjct: 240 DEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEIL---KLMEKEQVVFSVATYSILIQW 296
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
SG EA K F +M+EK I D +Y+S+I + +K A LF E ++ ++ +
Sbjct: 297 YSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPN 356
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ + G +E ++ M++ + ++ I ++G+ +R A+++
Sbjct: 357 AHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQA 416
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+ +G TY + N C++ Y +A+ + M +KG VV ++ + +Y K G
Sbjct: 417 IMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEG 476
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ +A L M+ KG PN+ YN+L+D + + + ++Q K+ EM + + PD +Y+
Sbjct: 477 NLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYS 536
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
++I D +K +NE R+ G + A M+ SK + +E KL +M
Sbjct: 537 SLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKI 596
Query: 569 GTKLDERLYHSAMNA----LRDAGLQMQ 592
G D+R++ S + + L AGL +Q
Sbjct: 597 GLIPDDRVFTSLVGSFHKPLTHAGLDIQ 624
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 153/344 (44%), Gaps = 38/344 (11%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++E+M+ I +D Y ++ ++G+ ++ ALF E R D P + H Y L
Sbjct: 309 IFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQR--DIVP-NAHTYGALIG 365
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ K+G+ A +M+ KG+ + I+ + + + ++ A L E+KG+
Sbjct: 366 GVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINA 425
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D V Y + NG K Y A +
Sbjct: 426 D-------VFTY----------------------------NILANGLCKLHRYDEAKCIL 450
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
++ +G P VT+ I YC+ ++AE++F +M++KG ++ Y++++ Y K
Sbjct: 451 NSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKK 510
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
+++ A + ++M KG P+++ Y+SL+ + + KL+ EM + +T + +Y
Sbjct: 511 EKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATY 570
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
T++IS ++ D K Y+E G + D + +VG F K
Sbjct: 571 TSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 125/274 (45%), Gaps = 6/274 (2%)
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+L ++ +++P+AHT L+ +A + + A LL + G ++ L+ FN+ M GY
Sbjct: 343 ALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGY 402
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + + M+ GI D Y + K+ ++ + + +
Sbjct: 403 CRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNV 462
Query: 257 FSTHMY-KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ M+ +I C K G EA + FRDM++KG + + Y +LI ++ +VK A +
Sbjct: 463 VTFTMFIEIYC----KEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHK 518
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ E KG+L D L+ G V++ L + M+ + + ++++G S
Sbjct: 519 IKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLS 578
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
K A K+Y++++ G IP + S++ ++
Sbjct: 579 KEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSF 612
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 147/329 (44%), Gaps = 23/329 (6%)
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
R FEA KF K IL + + C +SI V L +E EK C
Sbjct: 102 RLFEARKF---ATMKSILNGLVTDSDIECPVSSI--VDLVDEFESHFVEK-------FCD 149
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYEQLIS 392
L + + L ++T+ V + ++ L I + SC ++ KR G V+ + +++
Sbjct: 150 MLFRVCSDNRLFDETIRVYDYVEEKGLVIEE-RSCFVLLLALKRCGEVDFCVRFFHRMVE 208
Query: 393 QGCIPGQV-TYASIINAYCRIALYSKAEKVFIEMQQKGFDKC-VVAYSSMVAMY-GKTGR 449
+V + +I+ CR KA+++ EM KG K V Y++++ Y G+ R
Sbjct: 209 SNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDR 268
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ ++ M+ + +V Y+ L+ + + ++ + EK+++EM + + D Y++
Sbjct: 269 -KGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSS 327
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+IS R ++E V + G ++G K Q+E LL +M+S+G
Sbjct: 328 MISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKG 387
Query: 570 TKLDERLYHSAMNAL-----RDAGLQMQA 593
L+ ++++ M+ D L++QA
Sbjct: 388 VDLNLVIFNTTMDGYCRRGKMDEALRLQA 416
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/522 (20%), Positives = 233/522 (44%), Gaps = 5/522 (0%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQE-LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
+P+ ++ L G+ + ++QE L + + P+ + +I + D
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMG 194
S + +LPD T + ++A+ +A+ A +L + +G + + +NS +
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
GY I +KM+S G+ D Y +M+ K G + +F R L
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGL-- 332
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
P T Y L G E M GI D +++ LIC++A+ +V A
Sbjct: 333 KPEIT-TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAM 391
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
+F + ++G+ + ++ + + G VE + E M + L + + ++++G
Sbjct: 392 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 451
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+ A ++ +++ +G + + SII+++C+ ++EK+F M + G V
Sbjct: 452 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNV 511
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ Y++++ Y G++ +AM L++ M + G +PN Y++L++ + + + L+KE
Sbjct: 512 ITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKE 571
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
ME V+PD ++Y ++ + R + Y +G I+ + I++ K
Sbjct: 572 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 631
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ +++ Q++ KL+ R ++ ++AL G +A+ L
Sbjct: 632 TDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/452 (17%), Positives = 183/452 (40%), Gaps = 4/452 (0%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTI 206
V PD T L+ C RA + + L I G + +AF + G +
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 207 -LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+V +M G + + Y +++ S++ L + +P Y +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ K G + +A + +M ++GIL D Y S+I + + A E+ + G+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY-WAAV 384
+ D ++ Y G ++ + ++ M++ ++ D ++ +++ + + G A
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVE-PDVVTYSLLMDYLCKNGRCMEAR 321
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
K+++ + +G P TY +++ Y + + M + G +S ++ Y
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
G++ AM + +KM+ +G PN Y +++ + ++ + +++M ++P
Sbjct: 382 ANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+ Y ++I +++ + E G ++ ++ K ++ E KL +
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M G K + Y++ +N AG +A L
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 97/466 (20%), Positives = 176/466 (37%), Gaps = 47/466 (10%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQS------ 130
+PD ++S LHG Q +E A + + + P+ T LL+ YL ++
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKE-AIGFLKKMRS-DGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 131 -KKWDSIV--SLSEDFKIYNVL--------------------------PDAHTCSRLVAS 161
K +DS+ L + Y L PD + S L+
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI-- 378
Query: 162 CVRARKFKIANTLLQVFITDGEIAL----LAFNSAMGGYNKLHMYYSTILVYEKMKSAGI 217
C A + K+ +L VF + L + + + +G K +L +E+M G+
Sbjct: 379 CAYANQGKVDQAML-VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFE 277
+ Y ++ E+ L LE R + +T + + DS K GR E
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI---CLNTIFFNSIIDSHCKEGRVIE 494
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
+ K F M G+ + Y +LI + ++ A +L G+ + L+
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
Y + +E L + + M+++ + I+ G + R AA ++Y ++ G
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 614
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
TY I++ C+ L A ++F + ++ M+ K GR +A L
Sbjct: 615 ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+ G PN W Y + + L ++++L+ ME T D
Sbjct: 675 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 720
>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
Length = 938
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 214/506 (42%), Gaps = 12/506 (2%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
E+ YNE K + P+ T ++ R L Q+KK D + + + V PDA S
Sbjct: 324 EMVLAAYNEMKCF-QLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSS 382
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
+ K+ +A +LQ + + +A+N M G K + E G
Sbjct: 383 FLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQG 442
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
D Y ++ +Y K+G+ + S +++ + H+ L K G
Sbjct: 443 SNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIET---NCHIVSYLLQCFRKLGMTS 499
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
EA+ +F K+ G+ D IY + ++ + A +L E + G+ D L+
Sbjct: 500 EAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLI 559
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
Y +G ++ V E M A ++ + +GF K + +++ QG
Sbjct: 560 SGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLE 619
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P +TY I +CR S+AE +F +++KG D V YSSMV Y +G A L
Sbjct: 620 PNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYML 679
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
++ +G + + + L++ R N++ + K M V PD +SY+ +IS Y +
Sbjct: 680 FVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQ 739
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ D ++++ G +D + I++ + K +++E +L M + G K D
Sbjct: 740 NGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIA 799
Query: 577 YHSAMNALRDAGLQMQAQWLQQNFEG 602
Y L D L+ + LQQ +EG
Sbjct: 800 Y----TVLLDGHLK---ETLQQGWEG 818
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 138/573 (24%), Positives = 222/573 (38%), Gaps = 66/573 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEA--KKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
PDA+ + SFL G L D +LAY E +K+P E +++ L + + D
Sbjct: 375 PDARGYSSFLIG-LCDCGKYDLAYVILQEINREKVPV---EAMAYNMVMDGLCKEMRLDE 430
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMG 194
L E+ PD + S L+ S + A + ++ G E + +
Sbjct: 431 AEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQ 490
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
+ KL M I + K K +G+ LD Y M+ Y K G+ + L E K L
Sbjct: 491 CFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGL-- 548
Query: 255 TPFSTH----------------------------------MYKILCDSLGKSGRAFEALK 280
TP H Y IL KSG E
Sbjct: 549 TPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFD 608
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
M ++G+ + Y I F + AE LF EEKG+ + +V Y+
Sbjct: 609 LLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYL 668
Query: 341 EEGLVEKT-LDVVESMKNAKLKISDCISCA-IVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
G + + V + L D SC+ ++N + A V + ++ +P
Sbjct: 669 LSGWTDHAYMLFVRVARQGNL--VDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPD 726
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
++Y+ +I+ YC+ KA F +M Q+G V+ Y+ ++ Y K GR+++A L
Sbjct: 727 VISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFV 786
Query: 459 KMKAKGCEPNVWIYNSLMDMH----------GRAKNLRQV------EKLWKEMERRKVTP 502
+M G +P+V Y L+D H G AK R KL M+ ++ P
Sbjct: 787 QMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEP 846
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D YT +I +A + ++E G D ++ + +I + LL
Sbjct: 847 DVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLL 906
Query: 563 QDMKSEGTKLDERLYHSAMN--ALRDAGLQMQA 593
Q+M +G + DE L S +N +LR +Q A
Sbjct: 907 QEMIDKGIEPDE-LTFSVLNQSSLRSRKIQFCA 938
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 155/393 (39%), Gaps = 38/393 (9%)
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYK 263
+TI ++ + G+V + +++ + G+ E V A + E K +L TP + +
Sbjct: 290 ATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQL--TP-DVYTFA 346
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
I+ SL ++ + EAL+ + +M E G+ D Y+S +
Sbjct: 347 IVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCD----------------- 389
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
C K L Y+ +++ + K+ + +++G K A
Sbjct: 390 --------CGKYDLAYV----------ILQEINREKVPVEAMAYNMVMDGLCKEMRLDEA 431
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
K+ E QG P Y+ +I +YC++ A + M G + S ++
Sbjct: 432 EKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQC 491
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+ K G +A+ K K G + IYN MD + + N+ + KL EM+ +TPD
Sbjct: 492 FRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPD 551
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
K+ YT +IS Y E + + E D I+ F K + E+ LL
Sbjct: 552 KIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLD 611
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M +G + + Y A+ G +A+ L
Sbjct: 612 RMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVL 644
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 122/336 (36%), Gaps = 32/336 (9%)
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
R A +F+D + G D S Y+ +I + + K+ LF E PE+ L
Sbjct: 197 RPAIAFAYFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSLFSELVSSSNASGPEI-L 255
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC----AIVNGFSK--RRG-------- 379
LV + +L + I CI+C A + FS R G
Sbjct: 256 PLVDHHRRTCATPCSLSFM-----VDCLIKACITCYDVQATICLFSGICRLGVVPSVWTW 310
Query: 380 ------------YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
Y + Y ++ P T+A + + + +A +V+ EM +
Sbjct: 311 NLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTE 370
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G YSS + G+ A ++ ++ + YN +MD + L +
Sbjct: 371 MGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDE 430
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
EKL + R+ PD Y+ +I +Y + V Y +G + I ++
Sbjct: 431 AEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQ 490
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
F KL E + K G LD+ +Y+ AM+
Sbjct: 491 CFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDT 526
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 162/328 (49%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L ++ G+ EA + + E + YA LI ++ ++ AE +F E
Sbjct: 158 YNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAEMR 217
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
G+ V + ++ G +K ++ + MK K + ++N + K +
Sbjct: 218 NYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSF 277
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+K++ +++S C P TY +++NA+ R L KAE+VF +MQ+ G + V AY++++
Sbjct: 278 MALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALM 337
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y + G A + + M+ GCEP+ YN L+D +G+A E ++K+M+R +T
Sbjct: 338 EAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGIT 397
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P S+ ++SAY++ + C + N+ +G +D + M+ ++ +L Q ++ ++
Sbjct: 398 PTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEV 457
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGL 589
L+ M+ D Y+ +N AG
Sbjct: 458 LRVMEKGSYVADISTYNILINRYGQAGF 485
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 209/454 (46%), Gaps = 25/454 (5%)
Query: 127 LVQSKKWDSIVS------LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA-NTLLQVF- 178
L K+WDSI+S L FK PD + L+ + + +K A +T LQ+
Sbjct: 129 LRMRKQWDSIISICRWILLRSSFK-----PDVICYNLLIEAFGQKLLYKEAESTYLQLLE 183
Query: 179 ----ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
T+ ALL + G + V+ +M++ G+ + Y + K
Sbjct: 184 ARCIPTEDTYALLIKAYCISG-----LLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKG 238
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
G+S+K +F K K D+ +T Y +L + GK+G++F ALK F +M +
Sbjct: 239 GNSDKAEEIF---KRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNI 295
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
Y +L+ +FA + AEE+F++ +E G+ D L+ Y G ++
Sbjct: 296 CTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSL 355
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
M++ + +V+ + K A V++ + G P ++ +++AY ++
Sbjct: 356 MQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGS 415
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+K E++ +M + G +SM+ +YG+ G+ ++ M+ ++ YN
Sbjct: 416 VNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNI 475
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L++ +G+A + ++E L++ + + + PD V++T+ I AY++ + + C++ + E +G
Sbjct: 476 LINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDG 535
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
D A +++ S Q E++ +++ M +
Sbjct: 536 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMHKD 569
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++ F ++ Y A Y QL+ CIP + TYA +I AYC L KAE VF EM+ G
Sbjct: 161 LIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAEMRNYG 220
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
V Y++ + K G A + +MK C+P Y L++++G+A
Sbjct: 221 LPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMAL 280
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
KL+ EM P+ +YT +++A+ R + + + + + G D ++ +
Sbjct: 281 KLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAY 340
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
S+ ++ M+ G + D Y+ ++A AG Q A+
Sbjct: 341 SRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAE 385
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 154/369 (41%), Gaps = 13/369 (3%)
Query: 220 DSGCYCQIMEAY-----YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGR 274
D CY ++EA+ YK ++E LE + + T Y +L + SG
Sbjct: 154 DVICYNLLIEAFGQKLLYK--EAESTYLQLLEARCIPTEDT------YALLIKAYCISGL 205
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
+A F +M+ G+ +Y + I AEE+FK ++ E
Sbjct: 206 LEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTM 265
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
L+ +Y + G L + M + K + C A+VN F++ A +V+EQ+ G
Sbjct: 266 LINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAG 325
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
P Y +++ AY R A ++F MQ G + +Y+ +V YGK G DA
Sbjct: 326 LEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAE 385
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ MK G P + + L+ + + ++ + E++ +M + + D ++++ Y
Sbjct: 386 AVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLY 445
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
R +F + V D + I++ + + IE + L Q + S+G K D
Sbjct: 446 GRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDV 505
Query: 575 RLYHSAMNA 583
+ S + A
Sbjct: 506 VTWTSRIGA 514
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 216/509 (42%), Gaps = 77/509 (15%)
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE 183
+R LV++ + + E+ + +PD C+ L+ R K + A +L+V G
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168
Query: 184 IA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVL----------DSGCYCQIMEAYY 232
+ ++ +N + GY K + + V ++M + V+ DSG Q ME
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 233 KI--------------------GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKS 272
++ DS A+ L + R TP Y +L + + K
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTP-DVVTYNVLVNGICKE 287
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
GR EA+KF DM G + + ++ S S AE+L + KG P V
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF--SPSVV 345
Query: 333 LKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
+L+ +GL+ + +D++E M + + +++GF K + A++ E++
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+S+GC P VTY +++ A C K G++
Sbjct: 406 VSRGCYPDIVTYNTMLTALC-----------------------------------KDGKV 430
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
DA+ ++ ++ +KGC P + YN+++D +A + KL EM + + PD ++Y+++
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 511 ISAYNRAREFDMCVKFYNEF-RMNGGVIDRAIA--GIMVGVFSKLSQIEELVKLLQDMKS 567
+ +R + D +KF++EF RM GV A+ IM+G K Q + + L M +
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERM--GVRPNAVTFNSIMLG-LCKTRQTDRAIDFLVYMIN 547
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQAQWL 596
G K E Y + L G+ +A L
Sbjct: 548 RGCKPTETSYTILIEGLAYEGMAKEALEL 576
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/358 (17%), Positives = 136/358 (37%), Gaps = 53/358 (14%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T +L+ + + + D + D P+ T + ++ S ++ A L
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L + G +++ FN + + + I + EKM G +S Y ++ +
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGF-- 389
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
CK +K+D A+++ M +G D
Sbjct: 390 -------------CKEKKMD-----------------------RAIEYLERMVSRGCYPD 413
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVE----- 346
Y +++ + +V+ A E+ + KG C +++ Y + +GL +
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKG-------CSPVLITYNTVIDGLAKAGKTG 466
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
K + +++ M+ LK ++V G S+ A+K + + G P VT+ SI+
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIM 526
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
C+ +A + M +G +Y+ ++ G ++A+ L+ ++ KG
Sbjct: 527 LGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKG 584
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 202/451 (44%), Gaps = 5/451 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILV 208
P+ T S L+ +++ A L+ Q+F+T + + FN+ + G + + +
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMAL 208
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
++M + G D Y ++ K GD++ L + + KL+ +Y + D
Sbjct: 209 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP---GVLIYNTIIDG 265
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L K +AL F++M+ KGI + Y+SLI + A L + E+ + D
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ +++EG + + + + M + S +++NGF A +++E
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++S+ C P VTY ++I +C+ + +VF EM Q+G V Y+ ++ + G
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
A + +M + G PN+ YN+L+D + L + +++ ++R K+ P +Y
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I +A + + + + G D M+ F + EE L ++MK +
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 569 GTKLDERLYHSAMNA-LRDAGLQMQAQWLQQ 598
GT + Y++ + A LRD + A+ +++
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 189/440 (42%), Gaps = 8/440 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIA 171
++P T LI L K ++L + PD T +V C R
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
N L ++ E +L +N+ + G K + ++++M++ GI + Y ++
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
G + L + RK++ F+ + L D+ K G+ EA K + +M ++ I
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFT---FSALIDAFVKEGKLVEAEKLYDEMVKRSI- 357
Query: 292 EDPSI--YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
DPSI Y+SLI F + A+++F+ K D L+ + + VE+ +
Sbjct: 358 -DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+V M L + ++ G + A +++++++S G P +TY ++++
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ KA VF +Q+ + + Y+ M+ K G++ D L + KG +P+V
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
YN+++ R + + + L+KEM+ P+ Y T+I A R + + + E
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Query: 530 FRMNGGVIDRAIAGIMVGVF 549
R G D + G++ +
Sbjct: 597 MRSCGFAGDASTIGLVTNML 616
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 107/244 (43%)
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
E M+N + + ++N F +R A+ V +++ G P VT +S++N YC
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
S+A + +M G+ V +++++ + +AM L+ +M AKGC+P++ Y
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+++ + + L +ME+ K+ P + Y T+I + + D + + E
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
G + ++ + + +LL DM D + + ++A G ++
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 593 AQWL 596
A+ L
Sbjct: 345 AEKL 348
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 90/205 (43%), Gaps = 6/205 (2%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
AV ++ +++ P + ++ +++A ++ + + +MQ G YS ++
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ + ++ A+ ++ KM G EPN+ +SL++ + +K + + L +M P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 503 DKVSYTTVISA---YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ V++ T+I +N+A E + + G D G++V K +
Sbjct: 185 NTVTFNTLIHGLFLHNKASE---AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 560 KLLQDMKSEGTKLDERLYHSAMNAL 584
LL M+ + +Y++ ++ L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGL 266
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 176/381 (46%), Gaps = 11/381 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+++M G+ D+G Y ++ Y G ++V + E + L+ + Y +L D
Sbjct: 218 VFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCIT---YALLLD 274
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L K+GR EA FF M KGI D +IYA L+ +A+ + G+
Sbjct: 275 YLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSP 334
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKV 386
+ + + Y ++ ++E+ + + M+ L D +S A+++ K AV
Sbjct: 335 NRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLS-PDVVSFGALIDALCKLGRVDDAVLQ 393
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ Q+I++G P ++S++ C + + KAE++F E+ +G V +++++
Sbjct: 394 FNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCN 453
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
GR+ +A L+ M G PNV YN+L+ H + + KL M + P++ +
Sbjct: 454 EGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFT 513
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA---GIMVGVFSKLSQIEELVKLLQ 563
YT ++ Y +AR D + E M G + +A I+ G+F + + E +L
Sbjct: 514 YTILLRGYCKARRVDDAYSLFREMLMKG--VTPVVATYNTILHGLF-QTGRFSEANELYL 570
Query: 564 DMKSEGTKLDERLYHSAMNAL 584
+M + TK D Y+ +N L
Sbjct: 571 NMINSRTKCDIYTYNIILNGL 591
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 149/365 (40%), Gaps = 9/365 (2%)
Query: 237 SEKVAALFL----ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
SE+V +LF EC S+ P + Y IL + GR F + + G
Sbjct: 68 SERVVSLFTRMARECSSK---VAP-NACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRV 123
Query: 293 DPSIYASLICSFASITEVKLAEE-LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ + + L+ V A + L E G D ++ + EG VEK ++
Sbjct: 124 NVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNL 183
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
M + + + +++G K + A V++Q+I +G P TY +I+ Y
Sbjct: 184 FLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLS 243
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ + ++ EM G + + Y+ ++ K GR R+A M KG +P+V I
Sbjct: 244 TGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAI 303
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y L+ + L ++ M V+P++ + + AY + + + +N+ R
Sbjct: 304 YAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMR 363
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
G D G ++ KL ++++ V M +EG + ++ S + L G
Sbjct: 364 QQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWE 423
Query: 592 QAQWL 596
+A+ L
Sbjct: 424 KAEEL 428
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/482 (19%), Positives = 184/482 (38%), Gaps = 51/482 (10%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P+ T LI + + KW +V + E+ + + PD T + L+ + + + A
Sbjct: 228 KPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARL 287
Query: 174 LLQVFITDG---EIALLAF----NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQ 226
G ++A+ A + G +++H + + M G+ + +
Sbjct: 288 FFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFL------DLMVGNGVSPNRRIFNI 341
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
+ AY K E+ +F + + + L S + L D+L K GR +A+ F M
Sbjct: 342 MFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVS---FGALIDALCKLGRVDDAVLQFNQMI 398
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
+G+ + +++SL+ ++ + + AEELF E ++G+ D L+ EG V
Sbjct: 399 NEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVM 458
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ A ++ + +I G P ++Y +++
Sbjct: 459 E-----------------------------------AQRLIDLMIRVGVRPNVISYNTLV 483
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
+C +A K+ M G Y+ ++ Y K R+ DA L +M KG
Sbjct: 484 AGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVT 543
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P V YN+++ + + +L+ M + D +Y +++ + D K
Sbjct: 544 PVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKM 603
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ +D IM+G K + E+ + L + + G D Y L +
Sbjct: 604 FRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIE 663
Query: 587 AG 588
G
Sbjct: 664 EG 665
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 162/376 (43%), Gaps = 11/376 (2%)
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALK- 280
GC+C++ + AA L K+ + + + K LCD+ R EA
Sbjct: 98 GCFCRMGRLEHGF------AAFGLILKTGWRVNVIVISQLLKGLCDA----KRVDEATDI 147
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
M E G D Y ++I F +V+ A LF E ++G+ + ++
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLC 207
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ +V++ V + M + +K + +++G+ + V++ E++ + G P +
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCI 267
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TYA +++ C+ +A F M +KG V Y+ ++ Y G + + + M
Sbjct: 268 TYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
G PN I+N + + + + + ++ +M ++ ++PD VS+ +I A +
Sbjct: 328 VGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRV 387
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
D V +N+ G + + +V + + E+ +L ++ +G +D +++
Sbjct: 388 DDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTL 447
Query: 581 MNALRDAGLQMQAQWL 596
M L + G M+AQ L
Sbjct: 448 MCNLCNEGRVMEAQRL 463
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 118/563 (20%), Positives = 232/563 (41%), Gaps = 57/563 (10%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
IEL R P+ +++ +HG+ K+ + E A+ + + +K +P T +LI
Sbjct: 217 IELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDE-AFQFKEKMEK-ERVKPSLVTYGVLI 274
Query: 125 RYLVQSKKWDSIVSLSEDFK---------IYNVLPDAHTCSRLVASCVRARKFKIANTLL 175
LV+ +++D + ++ +YN L D + +++ ++ R I+N +
Sbjct: 275 NGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGIS 334
Query: 176 QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG 235
+T NS + GY K + + E+M + G V++ G + ++
Sbjct: 335 PNSVT--------CNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKC 386
Query: 236 DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
+ +E R + + +L L ++G+ EA++ + + EKG +
Sbjct: 387 RFDSALLFIMEMLLRNFKP---NDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTV 443
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
+LI + A +L KE E+G++ D L+L +EG VE+ + E M
Sbjct: 444 TSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEM 503
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
++ +++G A ++ + G P TY +I+ YC+
Sbjct: 504 VRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRV 563
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG------RIRDAM--------------- 454
+ EK+F EM ++ V Y +++ Y + G R+RD M
Sbjct: 564 EEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSL 623
Query: 455 --------------WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
L+ +M+ +G PNV Y +L+ + + + +V+ + +EM V
Sbjct: 624 IHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNV 683
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
P+K++YT +I+ + + K NE G V D + F K ++EE +K
Sbjct: 684 HPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALK 743
Query: 561 LLQDMKSEGTKLDERLYHSAMNA 583
+ M + G LD+ Y + ++
Sbjct: 744 VCDLMSTGGISLDDITYTTLIDG 766
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 141/309 (45%), Gaps = 3/309 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ ++M G+VLDS Y ++ A K G E+ L E R + ++ Y +L
Sbjct: 464 LLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYT---YNMLLH 520
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L G+ EA + + K+ G D Y +I + V+ E+LF+E + +
Sbjct: 521 GLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQ 580
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ V L+ Y E G + + + + M++ + + ++++G S +A ++
Sbjct: 581 NAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLL 640
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++ +G P V Y ++I YC++ K + + EM + Y+ M+ + K
Sbjct: 641 DEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKL 700
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G ++ A L+ +M KG P+ YN+L + + + + K+ M ++ D ++Y
Sbjct: 701 GNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITY 760
Query: 508 TTVISAYNR 516
TT+I +++
Sbjct: 761 TTLIDGWHK 769
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/453 (19%), Positives = 199/453 (43%), Gaps = 4/453 (0%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTI 206
+ P TC+ L++S V+A + K++ + + G + F++ + + I
Sbjct: 158 LFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAI 217
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
++ KM+ G+ + Y I+ K G ++ A + K K P S Y +L
Sbjct: 218 ELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDE--AFQFKEKMEKERVKP-SLVTYGVLI 274
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ L K R EA ++M ++G + +Y +LI + I + A ++ + G+
Sbjct: 275 NGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGIS 334
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+ C L+ Y + +E ++E M I+ ++++ + + +A+
Sbjct: 335 PNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLF 394
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+++ + P +++ C+ S+A +++ + +KGF V ++++ +
Sbjct: 395 IMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCE 454
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G +A L+ +M +G + YN+L+ + + + KL +EM RR + PD +
Sbjct: 455 AGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYT 514
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y ++ + + ++E + NG D GIM+ + K +++EE KL Q+M
Sbjct: 515 YNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMV 574
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
+ + + +Y + + A + G +A L+ +
Sbjct: 575 TMKIEQNAVVYGTLIRAYCENGNMREAFRLRDD 607
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 124/290 (42%), Gaps = 9/290 (3%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
H+Y LG G FE F + KG+ L+ S EVK++ ++F
Sbjct: 132 HVYSTQFKHLG-FGVVFE---LFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDI 187
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
G+ D + +V + G V+ +++ M+ + + I++G K
Sbjct: 188 MCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGR 247
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A + E++ + P VTY +IN ++ + +A + EM +G+ V Y++
Sbjct: 248 LDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNT 307
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ Y + G I A+ + M + G PN NSL+ + ++ + E L +EM
Sbjct: 308 LIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGG 367
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNE-----FRMNGGVIDRAIAGI 544
++ ++T+VI FD + F E F+ N G++ ++G+
Sbjct: 368 GVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGL 417
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 4/196 (2%)
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K G+ +++ L ++G P T ++++ + + +VF M G V
Sbjct: 139 KHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVY 198
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE--KLWK 493
+S+MV + GR+ DA+ L KM+ G PNV YN++ +HG KN R E + +
Sbjct: 199 LFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNI--IHGLCKNGRLDEAFQFKE 256
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
+ME+ +V P V+Y +I+ + FD E G + + ++ + ++
Sbjct: 257 KMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIG 316
Query: 554 QIEELVKLLQDMKSEG 569
I +++ DM S G
Sbjct: 317 NISTALQIRDDMISNG 332
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/368 (17%), Positives = 142/368 (38%), Gaps = 41/368 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + G+ ++ + E +Y +K F T LI L ++ +
Sbjct: 405 PNDGLLTLLVSGLCQNGKQSEAIELWYRLLEK--GFAANTVTSNALIHGLCEAGSKEEAA 462
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L ++ ++ D+ + + L+ +C + K + L + + G + + +N + G
Sbjct: 463 KLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGL 522
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ ++ + K G D+ Y +++ Y K E+ LF E + K++
Sbjct: 523 CNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNA 582
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+Y L + ++G EA + DM+ +GI + + Y+SLI ++I V A +L
Sbjct: 583 V---VYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQL 639
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E ++G+ + L+ Y + G + K +++ M + + ++NG K
Sbjct: 640 LDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCK 699
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTY---------------------------------- 402
AA K+ ++ +G +P VTY
Sbjct: 700 LGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDIT 759
Query: 403 -ASIINAY 409
++I+ +
Sbjct: 760 YTTLIDGW 767
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 186/444 (41%), Gaps = 40/444 (9%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVF-ITDGEIALLAFNSAMGGYNKLHMYYST 205
NV D + R + IA+ L V + D + + A+ + + Y++ Y
Sbjct: 169 NVNLDNQAVELMARILGRESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERA 228
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS-EKVAALFLECKSRKLDSTPFSTHMYKI 264
+ ++EKM +G+ Y +++ Y K+G S K+ L E +S+ L F+
Sbjct: 229 VAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVIS 288
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
C G+ G EA +FF +K +G Y +L+ F A + KE E+
Sbjct: 289 AC---GREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNN 345
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
D +LV Y+ G E+ ++++M +K
Sbjct: 346 CPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIK----------------------- 382
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
P VTY ++INAY R A KA ++ +M++ G V Y++++ M
Sbjct: 383 ------------PNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGML 430
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
GK + + M ++ MK GC PN +N+++ M G + V+++++EM+ PD+
Sbjct: 431 GKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDR 490
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
++ T+I+A R K Y+E G A ++ ++ +++D
Sbjct: 491 DTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKD 550
Query: 565 MKSEGTKLDERLYHSAMNALRDAG 588
MK++G K E Y +N+ G
Sbjct: 551 MKNKGFKPSETSYSLILNSYAKGG 574
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 186/435 (42%), Gaps = 21/435 (4%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
+ P T L++ ++ + +S+ ++ + N PDA T + LVA+ VRA ++
Sbjct: 311 YAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGA 370
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L+ +G + + + + + Y + + +Y++MK +G + Y I+
Sbjct: 371 ALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGML 430
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K SE++ + + K +D + + + G G + F++MK G
Sbjct: 431 GKKSQSEEMMKILCDMK---VDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFE 487
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
D + +LI + AE+++ E E G L+ G V
Sbjct: 488 PDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESV 547
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI-PGQVTYASIINAYC 410
++ MKN K S+ I+N ++K GY + E+ I G I P + ++I A
Sbjct: 548 IKDMKNKGFKPSETSYSLILNSYAKG-GYVKGINRIEKDIYDGHIFPSWMLLRTLILANF 606
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ + E+ F +Q+ G+ +V ++SM++M+ + A ++ ++ G +P++
Sbjct: 607 KCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLV 666
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR-------------- 516
YNSLMD++ R + E++ +E++ D +SY TVI + R
Sbjct: 667 TYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEM 726
Query: 517 -AREFDMCVKFYNEF 530
+R C+ YN F
Sbjct: 727 ISRGIRPCIVTYNTF 741
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 130/249 (52%), Gaps = 1/249 (0%)
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV-KVYEQLISQGCIPGQVT 401
G E+ + + E M + L + +++ + K W + + +++ S+G + T
Sbjct: 223 GKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFT 282
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+++I+A R L +A++ F+ ++ +G+ V Y++++ ++GK G +A+ ++ +M+
Sbjct: 283 CSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEME 342
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
C P+ YN L+ + RA + L M + P+ V+YTT+I+AY RA + D
Sbjct: 343 DNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVD 402
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ Y++ + +G + ++G+ K SQ EE++K+L DMK +G + +++ +
Sbjct: 403 KALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTML 462
Query: 582 NALRDAGLQ 590
+ + G+
Sbjct: 463 SMCGNKGMH 471
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 168/378 (44%), Gaps = 18/378 (4%)
Query: 227 IMEAYYKIGDSEKVAALF------LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALK 280
+++A GD E+ LF L + LD+ +++ LG+ + A K
Sbjct: 141 VLKALDLSGDCERAILLFEWLVLNLGTGNVNLDN-----QAVELMARILGRESQHSIASK 195
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM-- 338
F + D Y +++ S++ + + A +F++ E G+ P + V++
Sbjct: 196 LFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGL--SPTLVTYNVMLDV 253
Query: 339 YIEEGLV-EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK-VYEQLISQGCI 396
Y + G K L +++ M++ L D +C+ V R G K + L SQG
Sbjct: 254 YGKMGRSWNKILGLLDEMRSKGLGF-DEFTCSTVISACGREGLLDEAKEFFVGLKSQGYA 312
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
PG VTY +++ + + +YS+A + EM+ V Y+ +VA Y + G + L
Sbjct: 313 PGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAAL 372
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ M G +PN Y ++++ +GRA + + L+ +M+ P+ +Y ++ +
Sbjct: 373 IDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGK 432
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ + +K + +++G +R M+ + + + ++ Q+MKS G + D
Sbjct: 433 KSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDT 492
Query: 577 YHSAMNALRDAGLQMQAQ 594
+++ + A G + A+
Sbjct: 493 FNTLITASGRCGSDIDAE 510
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/488 (19%), Positives = 203/488 (41%), Gaps = 46/488 (9%)
Query: 144 KIYNVLP------DAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
K+++V+P D + ++ S R K++ A + + G L+ +N + Y
Sbjct: 195 KLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVY 254
Query: 197 NKLHMYYSTIL-VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K+ ++ IL + ++M+S G+ D ++ A + G ++ F+ KS+
Sbjct: 255 GKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGY--A 312
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P T Y L GK+G EAL ++M++ D Y L+ ++ +
Sbjct: 313 P-GTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAA 371
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI----- 370
L E G+ + ++ Y V+K L + + MK + + C AI
Sbjct: 372 LIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLG 431
Query: 371 ----------------VNGFSKRRGYWAAV--------------KVYEQLISQGCIPGQV 400
V+G + R W + +V++++ S G P +
Sbjct: 432 KKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRD 491
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
T+ ++I A R AEK++ EM + GF V Y++++ + G R A ++ M
Sbjct: 492 TFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDM 551
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
K KG +P+ Y+ +++ + + ++ + ++ K++ + P + T+I A + R
Sbjct: 552 KNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRAL 611
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ + + +G D + M+ +FS+ + + +++ ++ G + D Y+S
Sbjct: 612 AGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSL 671
Query: 581 MNALRDAG 588
M+ G
Sbjct: 672 MDLYARGG 679
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 102/524 (19%), Positives = 204/524 (38%), Gaps = 71/524 (13%)
Query: 18 TTYTCMKKSYRHTLFSTCKAFPFVTVN-----PSSIINHRFFQV--NASTNFPTIELNRD 70
T T + R L K F FV + P ++ + QV A + + ++
Sbjct: 282 TCSTVISACGREGLLDEAKEF-FVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKE 340
Query: 71 SHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE------FRPEKSTLKLLI 124
PDA ++ + ++ +Y E L + +P T +I
Sbjct: 341 MEDNNCPPDAVTYNELVAAYVR--------AGFYEEGAALIDTMTENGIKPNAVTYTTMI 392
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-E 183
++ + D +SL + K P+ T + ++ + + + +L DG
Sbjct: 393 NAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCA 452
Query: 184 IALLAFNS--AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG---DSE 238
+ +N+ +M G +H Y V+++MKS G D + ++ A + G D+E
Sbjct: 453 PNRITWNTMLSMCGNKGMHKYVKR--VFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAE 510
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
K+ LE TP S Y L ++L + G A +DMK KG + Y+
Sbjct: 511 KIYDEMLEA-----GFTP-SVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYS 564
Query: 299 SLICSFASITEVK---------------------------------LA--EELFKEAEEK 323
++ S+A VK LA E F+ ++
Sbjct: 565 LILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKH 624
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G D V ++ M+ + + ++ +++ ++ L+ ++++ +++ W A
Sbjct: 625 GYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKA 684
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
++ +L + G ++Y ++I +CR L +A + EM +G C+V Y++ V
Sbjct: 685 EEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGG 744
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
Y G + +++ M C PN Y ++D + +AK ++
Sbjct: 745 YAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKE 788
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 139/328 (42%), Gaps = 36/328 (10%)
Query: 150 PDAHTCSRLVASCVRARKF----KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYST 205
PD T + L+ + R KI + +L+ T ++ +N+ + + + +
Sbjct: 488 PDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTP---SVATYNALLNALARRGDWRTA 544
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYK-- 263
V + MK+ G Y I+ +Y K G + + +++ + H++
Sbjct: 545 ESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGI---------NRIEKDIYDGHIFPSW 595
Query: 264 ------IL----CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
IL C +L RAF+AL+ + G D ++ S++ F+ A
Sbjct: 596 MLLRTLILANFKCRALAGMERAFQALQ------KHGYKPDLVVFNSMLSMFSRKNMHDRA 649
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVN 372
E+ +E G+ D L+ +Y G K +++ ++N+ K SD IS ++
Sbjct: 650 HEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDK-SDLISYNTVIK 708
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
GF ++ A++ ++IS+G P VTY + + Y ++++ ++V M +
Sbjct: 709 GFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRP 768
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
+ Y +V Y K + ++AM V+ +
Sbjct: 769 NELTYKIVVDGYCKAKKFKEAMDFVSTI 796
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/506 (22%), Positives = 227/506 (44%), Gaps = 44/506 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P A++ SF+ + DP T A D LP L ++ L +KKWD I+
Sbjct: 80 PIAQQILSFIQKEV-DPSTVWAALD------TLPATHETWDDLINVVVQLRLNKKWDLIL 132
Query: 138 ----------SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI------TD 181
S D I+N++ DA+ R +K+A T I T+
Sbjct: 133 LICQWILYRSSFQSDVMIFNLVIDAYG---------RKSLYKMAETTYFELIEARCIPTE 183
Query: 182 GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
ALL + Y + ++ +M+ G+ + Y ++ K G+ ++
Sbjct: 184 DTYALL-----LKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAV 238
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
+F + K D ST Y +L + GK+ +++ ALK F +M+ + + Y +L+
Sbjct: 239 EIF---QRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALV 295
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAK 359
+FA + AEE+F++ +E G +P+V LM Y G ++ M++
Sbjct: 296 NAFAREGLCEKAEEIFEQLQEDG--HEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMG 353
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+ +V+ + + + A V+E++ G P ++ +++AY + +K E
Sbjct: 354 CEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCE 413
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
+ E+ + G + +SM+ +YG+ G+ ++ M++ ++ YN L++++
Sbjct: 414 DIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIY 473
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
GRA ++E L++ + + + PD V++T+ + AY+R + + C++ + E G D
Sbjct: 474 GRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPDG 533
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDM 565
A +++ S QIE++ +++ M
Sbjct: 534 RTAKVLLSSCSSEDQIEQVTTVIRTM 559
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 168/340 (49%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
++ ++ D+ G+ A + ++ E + YA L+ ++ + ++ AE +F E
Sbjct: 150 IFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYALLLKAYCTSGLLEKAEAIFAEM 209
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
+ G+ V + ++ G ++ +++ + MK + S ++N K
Sbjct: 210 RKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQS 269
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
+ A+K++ ++ SQ C P TY +++NA+ R L KAE++F ++Q+ G + V AY+++
Sbjct: 270 YMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNAL 329
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ Y + G A + + M+ GCEP+ YN ++D +GR + +++EM+R +
Sbjct: 330 MEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGI 389
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
TP S+ ++SAY++A + C NE +G D + M+ ++ +L Q ++ +
Sbjct: 390 TPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEE 449
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+L M+S D Y+ +N AG + + L Q+
Sbjct: 450 VLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSL 489
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 177/443 (39%), Gaps = 44/443 (9%)
Query: 147 NVLPDAH-TCSRLVASCVRARKFKIANTLLQV-----FITDGEIALLAFNSAMGGYNKLH 200
+ LP H T L+ V+ R K + +L + + + + ++ FN + Y +
Sbjct: 103 DTLPATHETWDDLINVVVQLRLNKKWDLILLICQWILYRSSFQSDVMIFNLVIDAYGRKS 162
Query: 201 MYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH 260
+Y Y ++ A + Y +++AY G EK A+F E + L P S
Sbjct: 163 LYKMAETTYFELIEARCIPTEDTYALLLKAYCTSGLLEKAEAIFAEMRKYGL---PPSAI 219
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y D L K+G A++ F+ MK Y LI ++ +A +LF E
Sbjct: 220 VYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNE- 278
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
M++ K K + C A+VN F++
Sbjct: 279 ----------------------------------MRSQKCKPNICTYTALVNAFAREGLC 304
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A +++EQL G P Y +++ AY R A ++F MQ G + +Y+ M
Sbjct: 305 EKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIM 364
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
V YG+ G DA + +MK G P + + L+ + +A ++ + E + E+ +
Sbjct: 365 VDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGL 424
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
PD ++++ Y R +F + D + I++ ++ + E++
Sbjct: 425 EPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEG 484
Query: 561 LLQDMKSEGTKLDERLYHSAMNA 583
L Q + ++ K D + S + A
Sbjct: 485 LFQSLAAKNLKPDVVTWTSRLGA 507
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 192/430 (44%), Gaps = 17/430 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVL-------PDAHTCSRLVASCVRARK 167
P+ LLIR QS+K E F+ + +L P A + + L A
Sbjct: 87 PQPQVFDLLIRTYTQSRKP------REAFEAFRLLLDHRVPIPAAASNALLAALSRAGWP 140
Query: 168 FKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
A+ V ++ E+ N + Y K + V +M+ + D + +
Sbjct: 141 HLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVM 200
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
++A ++ GD E AL S+ + + Y + L ++GR +A + FR M
Sbjct: 201 VDARFRAGDVEAAMALIDSMVSKGIKPGLVT---YNSVLKGLLRNGRWDKAREVFRAMDA 257
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
G+ D + LI F E++ A +KE + + D L+ ++ G ++
Sbjct: 258 CGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDH 317
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+ + M+ L I ++ GF + A++V +++++ GC+P VTY +++N
Sbjct: 318 AAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLN 377
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
C+ S AE++ EM+++G + +++++ Y + G I A+ + + P
Sbjct: 378 GLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRP 437
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
++ YN+L+D R +L + +LW +M R++ P+ V+Y+ +I ++ + D F
Sbjct: 438 DIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFL 497
Query: 528 NEFRMNGGVI 537
+E +N G++
Sbjct: 498 DEM-VNKGIV 506
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 192/435 (44%), Gaps = 43/435 (9%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
TL +++ ++ ++ + ++ + + V PD T + +V + RA + A L+
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSM 220
Query: 179 ITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
++ G + L+ +NS + G + + V+ M + G+ D + ++ + + G+
Sbjct: 221 VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGEL 280
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
E+ + E + R++ S + L + G A ++ R+M+E G++ D IY
Sbjct: 281 EEALRFYKEMRGRRVTPDVVS---FSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337
Query: 298 ASLI-------------------CSFASITEVKL----------------AEELFKEAEE 322
+I +F + +V AEEL E +E
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397
Query: 323 KGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
+G+ P++C L+ Y +G +EK L +++ + +L+ +++G ++
Sbjct: 398 RGV--PPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDL 455
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A ++++ + S+ P VTY+ +I+++C A EM KG ++ Y+S+
Sbjct: 456 GKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSI 515
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ Y ++G + + KM+ P++ YN+L+ + + + + L K ME V
Sbjct: 516 IKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENV 575
Query: 501 TPDKVSYTTVISAYN 515
PD V+Y +IS ++
Sbjct: 576 QPDAVTYNMIISGFS 590
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+V+ + K + V ++ + P VT+ +++A R A + M KG
Sbjct: 165 MVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKG 224
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+V Y+S++ + GR A + M A G P+V +N L+ RA L +
Sbjct: 225 IKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEAL 284
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+ +KEM R+VTPD VS++ +I + R E D ++ E R G + D I +++G F
Sbjct: 285 RFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGF 344
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + E +++ +M + G D Y++ +N L
Sbjct: 345 CRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGL 379
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 102/218 (46%), Gaps = 2/218 (0%)
Query: 378 RGYWA--AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
R W Y ++S T ++++YC+ + + + V EM+++ VV
Sbjct: 136 RAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVV 195
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
++ MV + G + AM L+ M +KG +P + YNS++ R + ++++ M
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM 255
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ V PD S+ +I + RA E + ++FY E R D ++G+F++ ++
Sbjct: 256 DACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEM 315
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ + L++M+ G D +Y + AGL ++A
Sbjct: 316 DHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEA 353
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 125/286 (43%), Gaps = 2/286 (0%)
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
++ S+ + + + E E++ + D +V G VE + +++SM +
Sbjct: 165 MVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKG 224
Query: 360 LKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+K +++ G R G W A +V+ + + G P ++ +I +CR +A
Sbjct: 225 IKPGLVTYNSVLKGL-LRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEA 283
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+ + EM+ + VV++S ++ ++ + G + A + +M+ G P+ IY ++
Sbjct: 284 LRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGG 343
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
RA + + ++ EM PD V+Y T+++ + R + NE + G D
Sbjct: 344 FCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPD 403
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ + + IE+ ++ + + + D Y++ ++ +
Sbjct: 404 LCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGM 449
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 209/475 (44%), Gaps = 45/475 (9%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P+ +T +LI+ L ++ + + + E+ Y + PD T + T
Sbjct: 208 KPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFT----------------T 251
Query: 174 LLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+Q FI +G + N A+ + E+M +AG + ++ Y K
Sbjct: 252 LMQGFIEEGNM-----NGALR-------------IREQMVAAGCPSSNVTVNVLVHGYCK 293
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G E+V + E + F+ + L + L + G AL+ M ++G D
Sbjct: 294 EGRIEEVLSFIDEMSNEGFRPDRFT---FNSLVNGLCRIGHVKHALEILDVMLQEGFDPD 350
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRD--PEVCL--KLVLMYIEEGLVEKTL 349
Y SLI + EV+ A E+ + +LRD P L+ +E VE+
Sbjct: 351 IFTYNSLIFGLCKLGEVEEAVEILNQM----ILRDFSPNTVTYNTLISTLCKENQVEEAT 406
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
++ + + + C +++ G + A++++E++ ++GC P + TY +I++
Sbjct: 407 ELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSL 466
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C +A + EM+ G + VV Y++++ + K RI +A + +M+ +G NV
Sbjct: 467 CSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNV 526
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
YN+L+D + + + + +L +M + PDK +Y ++++ + RA +
Sbjct: 527 VTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQT 586
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
NG D G ++ SK ++E +LL+ ++ +G L + Y+ + AL
Sbjct: 587 MTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKAL 641
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 173/380 (45%), Gaps = 8/380 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKI---GDSEKVAALFLECKSRKLDSTPFSTHMYKI 264
V ++MK G + G + ++E+Y K ++ V + E KLD+ ++ + +
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYN-FLLNV 185
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L D G + E + M +GI D + + LI + +++ A + +E G
Sbjct: 186 LVD--GNKLKLVEIVN--SRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYG 241
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ D + L+ +IEEG + L + E M A S+ +V+G+ K +
Sbjct: 242 LSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVL 301
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+++ ++G P + T+ S++N CRI A ++ M Q+GFD + Y+S++
Sbjct: 302 SFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGL 361
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K G + +A+ ++ +M + PN YN+L+ + + + +L + + + + PD
Sbjct: 362 CKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV 421
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
++ ++I + ++ + E + G D +++ ++EE + LL++
Sbjct: 422 CTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKE 481
Query: 565 MKSEGTKLDERLYHSAMNAL 584
M+S G + Y++ ++
Sbjct: 482 MESSGCSRNVVTYNTLIDGF 501
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 44/239 (18%), Positives = 95/239 (39%), Gaps = 1/239 (0%)
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ-GCIPGQVTYASIINAY 409
V++ MK+ +I ++ ++K + AV V + + + G TY ++N
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVL 186
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
E V M +G V ++ ++ + +IR A+ ++ +M + G P+
Sbjct: 187 VDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDE 246
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
+ +LM N+ ++ ++M V+ ++ Y + + + F +E
Sbjct: 247 KTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDE 306
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G DR +V ++ ++ +++L M EG D Y+S + L G
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLG 365
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 201/470 (42%), Gaps = 43/470 (9%)
Query: 154 TCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV--YE 210
T + L+ +C R + A L+ DG + + ++ + + + S +L+ Y+
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
+++ + LD I+ + K GD K L ++ L + T + +L
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSA---KTATLVSIISALA 315
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
SGR EA F ++++ GI Y +L+ + +K AE + E E++G+ D
Sbjct: 316 DSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEH 375
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-------- 382
L+ Y+ G E V++ M+ ++ + + ++ GF + RG W
Sbjct: 376 TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGF-RDRGEWQKTFQVLKE 434
Query: 383 ----------------------------AVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
A+ +++++S+G P +VT+ ++I+ +C+
Sbjct: 435 MKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+ AE++F M+++G C Y+ M+ YG R D L+ KMK++G PNV + +
Sbjct: 495 HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTT 554
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L+D++G++ + +EM+ + P Y +I+AY + + V + +G
Sbjct: 555 LVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDG 614
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ F + + E +LQ MK G K D Y + M AL
Sbjct: 615 LKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 664
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/378 (18%), Positives = 175/378 (46%), Gaps = 3/378 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++E+++ +GI + Y +++ Y K G + ++ E + R + H Y +L D
Sbjct: 326 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSP---DEHTYSLLID 382
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ +GR A ++M+ + + +++ L+ F E + ++ KE + G+
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D + ++ + + ++ + + M + ++ +++ K + A +++
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 502
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
E + +GC+P TY +IN+Y + +++ +M+ +G VV ++++V +YGK+
Sbjct: 503 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 562
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR DA+ + +MK+ G +P+ +YN+L++ + + Q ++ M + P ++
Sbjct: 563 GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLAL 622
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
++I+A+ R + NG D ++ ++ + +++ + ++M
Sbjct: 623 NSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIM 682
Query: 568 EGTKLDERLYHSAMNALR 585
G K D + +ALR
Sbjct: 683 SGCKPDRKARSMLRSALR 700
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 151/325 (46%), Gaps = 9/325 (2%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y IL +LG+S + +EA + +K L P Y +LI + A +++ A L +
Sbjct: 169 LYSILIHALGRSEKLYEAFL----LSQKQTLT-PLTYNALIGACARNNDIEKALNLIAKM 223
Query: 321 EEKGMLRDPEVCLKLVLMYI-EEGLVEKT--LDVVESMKNAKLKISDCISCAIVNGFSKR 377
+ G D V LV+ + ++ L + + ++ KL++ + I+ GF+K
Sbjct: 224 RQDGYQSD-FVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A+++ + G T SII+A +AE +F E++Q G AY
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++++ Y KTG ++DA +V++M+ +G P+ Y+ L+D + A + KEME
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
V P+ ++ +++ + E+ + E + G DR +++ F K + ++
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMN 582
+ M SEG + D +++ ++
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLID 487
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 207/490 (42%), Gaps = 44/490 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + ++ L +L + + Q + Y N K P T +L++ L ++ + D+
Sbjct: 142 PTVRIYNHLLDALLSENKFQMINPLYTNMKKD--GLIPNVFTYNILLKALCKNDRVDAAH 199
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
L + PDA T + +V+S +A K A L F + ++ +N+ + G
Sbjct: 200 KLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF----KPSVPVYNALIDGMC 255
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
K I + +M G+ + Y I+ + G+ E ALF + R D+
Sbjct: 256 KEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDA--- 312
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ H + L G+ +EAL ++ M + G + Y +LI S
Sbjct: 313 NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS----------- 361
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
G +E+ L V + M+ + + +++GF+K
Sbjct: 362 ------------------------NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKS 397
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A + + ++IS GC P VTY +++ C+ +++ +A + +M +G + +
Sbjct: 398 GDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITF 457
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++ + GR+ AM L+ +M+ GC PN+ YN L+D R + L++E+E
Sbjct: 458 NTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
R + P+ V+Y TV+ ++RA ++ + + + G D M+ + K +++
Sbjct: 518 RNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKI 577
Query: 558 LVKLLQDMKS 567
+L++ + S
Sbjct: 578 AAQLVERVSS 587
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 186/451 (41%), Gaps = 62/451 (13%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF-----LECK------SRKLDS-- 254
+ ++MK GI + I+ Y ++G +E+ +F CK + LD+
Sbjct: 96 ILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALL 155
Query: 255 --------TPFSTHM-----------YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
P T+M Y IL +L K+ R A K F +M KG D
Sbjct: 156 SENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAV 215
Query: 296 IYASLICSFASITEVKLAEEL---FK------EAEEKGMLRDP--EVCLKLVLMYIEEGL 344
Y +++ S ++ A EL FK A GM ++ EV +KL+ ++ G+
Sbjct: 216 TYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGV 275
Query: 345 VEKTLD---VVESM---KNAKLKIS--------DCIS-----CAIVNGFSKRRGYWAAVK 385
+ ++ S+ N +L + C + ++ G R + A+
Sbjct: 276 DPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALD 335
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+++ +I GC P V Y ++I+ C +A +V +MQ+ G V YS ++ +
Sbjct: 336 LWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFA 395
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K+G + A +M + GC PNV Y ++D+ + Q L ++M TP+ +
Sbjct: 396 KSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTI 455
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
++ T I + +K + +G + + ++ ++++ EE L Q++
Sbjct: 456 TFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI 515
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ + + Y++ + AG+ +A L
Sbjct: 516 EARNLQPNLVTYNTVLYGFSRAGMMGEALQL 546
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 152/292 (52%), Gaps = 1/292 (0%)
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
YA L+ ++ + + AE + E E G+ + V + ++ EK ++V + MK
Sbjct: 15 YALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMK 74
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ + + ++N + K + +++KV+ ++ S GC P TY +++NA+ R L
Sbjct: 75 RERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCE 134
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
KAE+VF EMQQ G + V AY++++ Y + G + A + + M+ GCEP+ YN L+
Sbjct: 135 KAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILV 194
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D +GRA E +++E+++R ++P S+ +++A+ R+ C + + +G
Sbjct: 195 DAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLT 254
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
D M+ +++ +++++ +L M+ G D Y+ A+NA AG
Sbjct: 255 PDTFALNAMLNAYARAGRLDDMERLFAAMERRGDA-DVGTYNVAVNAYGRAG 305
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 171/360 (47%), Gaps = 8/360 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V +M+ GI ++ Y ++ K +EK ++ K + + +T + ++ +
Sbjct: 34 VISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRA---NTETFTLMIN 90
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ + ++K F +MK G + Y +L+ +FA + AEE+F+E ++ G
Sbjct: 91 VYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG--H 148
Query: 328 DPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+P+V LM Y GL + ++ M++ + +V+ + + + A
Sbjct: 149 EPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEA 208
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
V+E+L +G P ++ ++ A+ R ++ E+V ++ + G A ++M+ Y
Sbjct: 209 VFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYA 268
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+ GR+ D L A M+ +G + +V YN ++ +GRA + ++E + + R + D V
Sbjct: 269 RAGRLDDMERLFAAMERRG-DADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVV 327
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
++T + AY R +E+ CV E G D A +++ S Q+E++ +++ M
Sbjct: 328 TWTARMGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAACSDERQVEQVTAIVRSM 387
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 121/260 (46%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L + +G A +M+E GI + ++Y + + + A E+++ +
Sbjct: 15 YALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMK 74
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ + E ++ +Y + ++ V MK+ K + C A+VN F++
Sbjct: 75 RERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCE 134
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A +V+E++ G P Y +++ AY R L A ++F MQ G + +Y+ +V
Sbjct: 135 KAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILV 194
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
YG+ G DA + ++K +G P + + L+ H R+ N + E++ ++ + +T
Sbjct: 195 DAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLT 254
Query: 502 PDKVSYTTVISAYNRAREFD 521
PD + +++AY RA D
Sbjct: 255 PDTFALNAMLNAYARAGRLD 274
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS---------- 439
L+ C+P + TYA ++ AYC +AE V EM++ G Y++
Sbjct: 3 LLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARC 62
Query: 440 -------------------------MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
M+ +YGK + +M + +MK+ GC+PN+ Y +
Sbjct: 63 TEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTA 122
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L++ R + E++++EM++ PD +Y ++ AY+RA + ++ + G
Sbjct: 123 LVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMG 182
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
DRA I+V + + E+ + +++K G
Sbjct: 183 CEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRG 217
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 150/337 (44%), Gaps = 14/337 (4%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+A ++++L G+LK + E A + Y K+ R T L+I ++K+ S +
Sbjct: 45 PNATVYNAYLDGLLK-ARCTEKAVEVYQRMKR-ERCRANTETFTLMINVYGKAKQPMSSM 102
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ + K P+ T + LV + R + A + + G E + A+N+ M Y
Sbjct: 103 KVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAY 162
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
++ + ++ M+ G D Y +++AY + G E A+F E K R + T
Sbjct: 163 SRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPT- 221
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+HM +L + +SG A + + + G+ D +++ ++A + E L
Sbjct: 222 MKSHM--LLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERL 279
Query: 317 FKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNG 373
F E +G D +V V + Y G V + ++ + A+ +D ++ A +
Sbjct: 280 FAAMERRG---DADVGTYNVAVNAYGRAGYVGR-MEAAFAAVAARGLAADVVTWTARMGA 335
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+++R+ Y V + E+++ GC P T A ++ A C
Sbjct: 336 YARRKEYGRCVGMVEEMVDAGCYPDAGT-ARVLLAAC 371
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/522 (20%), Positives = 232/522 (44%), Gaps = 5/522 (0%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQE-LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
+P+ ++ L G+ + ++QE L + + P+ + +I + D
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMG 194
S + +LPD T + ++A+ +A+ A +L + +G + + +NS +
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
GY I +KM+S G+ D Y +M+ K G + +F R L
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGL-- 332
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
P T Y L G E M GI D +++ LIC++A +V A
Sbjct: 333 KPEIT-TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAM 391
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
+F + ++G+ + ++ + + G VE + E M + L + + ++++G
Sbjct: 392 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 451
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+ A ++ +++ +G + + SII+++C+ ++EK+F M + G V
Sbjct: 452 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNV 511
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ Y++++ Y G++ +AM L++ M + G +PN Y++L++ + + + L+KE
Sbjct: 512 ITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKE 571
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
ME V+PD ++Y ++ + R + Y +G I+ + I++ K
Sbjct: 572 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 631
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ +++ Q++ KL+ R ++ ++AL G +A+ L
Sbjct: 632 TDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/452 (18%), Positives = 184/452 (40%), Gaps = 4/452 (0%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTI 206
V PD T L+ C RA + + L I G + +AF + G +
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 207 -LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+V +M G + + Y +++ S++ L + +P Y +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ K G + +A + +M ++GIL D Y S+I + + A E+ + G+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY-WAAV 384
+ D ++ Y G ++ + ++ M++ ++ D ++ +++ + + G A
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVE-PDVVTYSLLMDYLCKNGRCMEAR 321
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
K+++ + +G P TY +++ Y + + M + G +S ++ Y
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K G++ AM + +KM+ +G PN Y +++ + ++ + +++M ++P
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+ Y ++I +++ + E G ++ ++ K ++ E KL +
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M G K + Y++ +N AG +A L
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 97/466 (20%), Positives = 177/466 (37%), Gaps = 47/466 (10%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQS------ 130
+PD ++S LHG Q +E A + + + P+ T LL+ YL ++
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKE-AIGFLKKMRS-DGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 131 -KKWDSIV--SLSEDFKIYNVL--------------------------PDAHTCSRLVAS 161
K +DS+ L + Y L PD + S L+
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI-- 378
Query: 162 CVRARKFKIANTLLQVFITDGEIAL----LAFNSAMGGYNKLHMYYSTILVYEKMKSAGI 217
C A++ K+ +L VF + L + + + +G K +L +E+M G+
Sbjct: 379 CAYAKQGKVDQAML-VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFE 277
+ Y ++ E+ L LE R + +T + + DS K GR E
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI---CLNTIFFNSIIDSHCKEGRVIE 494
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
+ K F M G+ + Y +LI + ++ A +L G+ + L+
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
Y + +E L + + M+++ + I+ G + R AA ++Y ++ G
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 614
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
TY I++ C+ L A ++F + ++ M+ K GR +A L
Sbjct: 615 ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+ G PN W Y + + L ++++L+ ME T D
Sbjct: 675 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 720
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 173/398 (43%), Gaps = 16/398 (4%)
Query: 199 LHMYYSTILVY-------------EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+H+Y S I Y E+M S GI L+ +C I+ Y G++E F
Sbjct: 52 VHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFE 111
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ K+ L P +Y + + ++G M+E+G + +Y +++ FA
Sbjct: 112 KFKAENL--VPGGI-VYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFA 168
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
I + + F + G+ +V ++ + G + K LD++E M + +
Sbjct: 169 EIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKM 228
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
I I++G+++ + AA KV+E ++S G P V Y +++A+C+ KA V +
Sbjct: 229 IYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENI 288
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+ + Y+S++ Y K G I+ A+ + ++K G P V YNSL+ +A+ +
Sbjct: 289 EANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQM 348
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ EM V P++ SYT + Y RA + + + + ID G +
Sbjct: 349 ENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGAL 408
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ K ++ ++ Q + G K + Y + ++
Sbjct: 409 LKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDG 446
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 197/449 (43%), Gaps = 4/449 (0%)
Query: 141 EDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKL 199
E + ++ P+ H + L+ + AR + A + ++ G ++ F S + GY
Sbjct: 41 EAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASA 100
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
+ +EK K+ +V Y I++AY + G+ E V AL + + +
Sbjct: 101 GNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQG---NL 157
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+Y + + + + L FF +K G+ + Y ++ F + A ++ +E
Sbjct: 158 GLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEE 217
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
++ G+ + + ++ Y G V E M +A LK I +V+ F K
Sbjct: 218 MDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGR 277
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A+ V E + + +P TY SI++ Y + KA +VF ++ G VV+Y+S
Sbjct: 278 MDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNS 337
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
+++ K ++ +A ++ +M A G PN Y +L + + RA ++ + +++ M++
Sbjct: 338 LLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKEN 397
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ D V+Y ++ A ++ + + + G +R M+ +++ ++ +
Sbjct: 398 LAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKAR 457
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAG 588
LL DM+ G LD Y S + A +G
Sbjct: 458 DLLNDMQKHGFHLDTICYTSFIKACFRSG 486
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/474 (18%), Positives = 211/474 (44%), Gaps = 6/474 (1%)
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNV-LPDAHTCSRLVASCVR 164
EA + +P LI +++ + V+ +E+ + L +A CS +++
Sbjct: 41 EAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCS-IISGYAS 99
Query: 165 ARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGC 223
A + A + F + + + +NS + Y + + + +M+ G + G
Sbjct: 100 AGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGL 159
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y ++ + +I D EK + F K+ L T + Y + K+G +AL
Sbjct: 160 YTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAAT---YGCIVKLFTKAGNMAKALDILE 216
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+M + G+ + IYA ++ +A + A +++++ G+ D + LV + + G
Sbjct: 217 EMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAG 276
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
++K L V+E+++ +L + +I++G+ K A++V++++ + G PG V+Y
Sbjct: 277 RMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYN 336
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
S+++ + A + EM G +Y+++ Y + G + A + +MK +
Sbjct: 337 SLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKE 396
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
++ Y +L+ ++ +++ ++++++ + ++++Y T++ + R E
Sbjct: 397 NLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKA 456
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
N+ + +G +D + + EE+ + L M+ + +++ R Y
Sbjct: 457 RDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTY 510
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/465 (19%), Positives = 194/465 (41%), Gaps = 40/465 (8%)
Query: 141 EDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKL 199
E FK N++P + +V + +A + LL +G + L + + + G+ ++
Sbjct: 111 EKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEI 170
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
+ + ++K+ G+ + Y I++ + K G+ K + E +
Sbjct: 171 RDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKM-- 228
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+Y ++ D + G A K + DM G+ D IY L+ +F + A + +
Sbjct: 229 -IYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLEN 287
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
E +L E ++ Y++ G ++K L+V + +K A L+ ++++G +K R
Sbjct: 288 IEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQ 347
Query: 380 YWAAVKVYEQLISQGCIPGQ-----------------------------------VTYAS 404
A + ++++ G +P + V Y +
Sbjct: 348 MENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGA 407
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
++ A C+ +A +VF ++ G + Y +M+ + + G + A L+ M+ G
Sbjct: 408 LLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHG 467
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+ Y S + R+ + +V + M +K+ + +YTT+I + A + D +
Sbjct: 468 FHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAI 527
Query: 525 KFYNEFRMNGGVIDRAIAG-IMVGVFSKLSQIEELVKLLQDMKSE 568
Y + + +G +D A++ ++ G+ S SQ L + +Q + +E
Sbjct: 528 SCYEQAKASGLQLDSALSNCLLSGLISCASQNSTLGEKIQAISAE 572
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 118/536 (22%), Positives = 229/536 (42%), Gaps = 16/536 (2%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I+L D +P F L G++ + +L Y + ++ + R + + +LI
Sbjct: 64 IDLFSDMLRSRPLPSVVDF-CKLMGVVVRMERPDLVISLYQKMER-KQIRCDIYSFNILI 121
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGE 183
+ K +S + PD T + L+ CV R + + Q+F T
Sbjct: 122 KCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCR 181
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ F + M G + + + ++M G+ Y I++ K GD+ V+AL
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT--VSAL 239
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
L K ++ + +Y + DSL K GR +A F +M+EKGI D Y S+I
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
F S AE+L +E E+ + D L+ +++EG + ++ + M + +
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
++++GF K+ AA ++ + ++GC P +T+ ++I+ YC ++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM + G Y++++ + G + A+ L+ +M + G P++ ++L+D
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 484 NLRQVEKLWKEMERRK-----------VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
L+ +++K M++ K V PD +Y +IS +F + Y E
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G V D M+ K S+++E ++ M S+ + + + +N AG
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/469 (18%), Positives = 206/469 (43%), Gaps = 18/469 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + + + GM K T A + + +++ P +I L + +
Sbjct: 217 PTQITYGTIVDGMCKKGDTVS-ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGG 195
+L + + + PD T + ++ + ++ A LLQ + + +I+ ++ +N+ +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML-ERKISPDVVTYNALINA 334
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K ++ +Y++M GI+ ++ Y +++ + K + +F ++
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ + L D + R + ++ +M E G++ D + Y +LI F + ++ A +
Sbjct: 395 LIT---FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK--LKISDCISCA---- 369
L +E G+ D C L+ + G ++ L++ + M+ +K L S +
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 370 -----IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++G + A ++YE++ +G +P +TY+S+I+ C+ + +A ++F
Sbjct: 512 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M K F VV +++++ Y K GR+ D + L +M +G N Y +L+ + N
Sbjct: 572 MGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+ +++EM V PD ++ +++ E V + +M+
Sbjct: 632 INGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/520 (20%), Positives = 215/520 (41%), Gaps = 18/520 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F + LHG+ + + E A D++++ + RP T L+ L + + V
Sbjct: 147 PDVVTFTTLLHGLCVEDRVSE-ALDFFHQMFE-TTCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 138 SLSEDFKIYNVLPDAHTCSRLV-ASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
+L + + P T +V C + N L ++ I ++ +++ +
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K + ++ +M+ GI D Y ++ + G L E RK+
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y L ++ K G+ FEA + + +M +GI+ + Y+S+I F + AE
Sbjct: 325 VVT---YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F KG + L+ Y ++ ++++ M L +++GF
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ-------- 427
AA+ + +++IS G P VT ++++ C A ++F MQ+
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 428 ---KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
G + V Y+ +++ G+ +A L +M +G P+ Y+S++D +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
L + +++ M + +P+ V++TT+I+ Y +A D ++ + E G V +
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ F K+ I + + Q+M S G D + + L
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 174/378 (46%), Gaps = 17/378 (4%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFSTHMYKIL 265
V +M G+ D Y +++ + K+G+++ LF E ++R++ DS FS ++
Sbjct: 202 VLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSA----LI 257
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
C L SG+ EA K F +M +KG D Y +LI + + E+K A L + + G+
Sbjct: 258 C-GLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGL 316
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ L + G ++ +++ M L+++ IVNG K AVK
Sbjct: 317 TPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVK 376
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+ E++ G P +TY ++++AY + KA ++ EM +G VV ++ ++
Sbjct: 377 LMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLC 436
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+G++ D L+ M KG PN YNS+M + N+R ++++ M + V PD
Sbjct: 437 MSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSN 496
Query: 506 SYTTVISAYNRAREFDMCVKFYNE-----FRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
+Y +I + +AR + E F + + I G F K ++ E +
Sbjct: 497 TYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKG-----FFKRKKLLEARQ 551
Query: 561 LLQDMKSEGTKLDERLYH 578
L ++M+ EG +Y+
Sbjct: 552 LFEEMRREGLVASAEIYN 569
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 168/372 (45%), Gaps = 15/372 (4%)
Query: 232 YKIGDSEKVAALFLECKSRKLD---------------STPFSTHMYKILCDSLGKSGRAF 276
Y + S L+L C S K D ++T Y IL +SL + G+
Sbjct: 68 YGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIR 127
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
EA M+ KG + D Y ++I + + E++ +L KE + KG+ + ++
Sbjct: 128 EAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSII 187
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
L+ + G V + V+ M + I +++GF K AA K++ ++ ++ +
Sbjct: 188 LLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIV 247
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + ++++I +A+K+F EM +KGF+ V Y++++ Y K G ++ A +L
Sbjct: 248 PDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFL 307
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+M G PNV Y +L D ++ L +L EM R+ + + +Y T+++ +
Sbjct: 308 HNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCK 367
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
A VK E + G D ++ + K ++ + +LL++M G +
Sbjct: 368 AGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVT 427
Query: 577 YHSAMNALRDAG 588
++ MN L +G
Sbjct: 428 FNVLMNGLCMSG 439
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 192/460 (41%), Gaps = 46/460 (10%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALL----AFNSAMGGYNKLHM 201
Y V A +C+ L +C+ +++ + +L+VF ++ + ++N M +L
Sbjct: 68 YGVALSAGSCN-LYLTCLSSKR-DMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGK 125
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFS-TH 260
+ +M+ G + D Y I++ Y +G+ +KV L E + + L ++ +
Sbjct: 126 IREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSS 185
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+ +LC KSG+ E K R+M ++G+ D IY +LI F + + A +LF E
Sbjct: 186 IILLLC----KSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEM 241
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
E + ++ D L+ G V + + M + + A+++G+ K
Sbjct: 242 EAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEM 301
Query: 381 WAAVKVYEQLISQGCIPGQVTYA-----------------------------------SI 405
A ++ Q++ G P VTY +I
Sbjct: 302 KKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTI 361
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
+N C+ +A K+ EM++ G + Y++++ Y KTG + A L+ +M +G
Sbjct: 362 VNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGL 421
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
+P V +N LM+ + L E+L K M + + P+ +Y +++ Y + +
Sbjct: 422 QPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTE 481
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
Y G V D I++ K ++E L ++M
Sbjct: 482 IYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEM 521
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 150/319 (47%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
LK F + + G+ + Y L+ S + +++ A L E KG + D ++
Sbjct: 94 VLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIID 153
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
Y G ++K + +V+ M+ LK + +I+ K KV +++ +G P
Sbjct: 154 GYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFP 213
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
V Y ++I+ +C++ A K+F EM+ + +A+S+++ +G++ +A L
Sbjct: 214 DHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLF 273
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+M KG EP+ Y +L+D + + +++ L +M + +TP+ V+YT + ++
Sbjct: 274 NEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKS 333
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
E D + +E G ++ + +V K I + VKL+++MK G D Y
Sbjct: 334 GELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITY 393
Query: 578 HSAMNALRDAGLQMQAQWL 596
+ M+A G ++A+ L
Sbjct: 394 TTLMDAYYKTGEMVKAREL 412
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 126/272 (46%), Gaps = 1/272 (0%)
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV-KV 386
DP V + +E GL+ + + + N + +S + S +R V KV
Sbjct: 38 DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKV 97
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ + G +Y ++N+ R+ +A + + M+ KG VV+Y++++ Y
Sbjct: 98 FSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCH 157
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G ++ + LV +M+ KG +PN++ Y+S++ + ++ + + EK+ +EM +R V PD V
Sbjct: 158 VGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVI 217
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
YTT+I + + K ++E V D ++ S ++ E KL +M
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMI 277
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+G + DE Y + ++ G +A +L
Sbjct: 278 KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHN 309
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 192/403 (47%), Gaps = 44/403 (10%)
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
+YK +E +F ++R+ ++ S + ++ LGK GRA A D++ G+
Sbjct: 159 FYK--KNELALCVFYFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGV 216
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL-MYIEEGLV-EKT 348
D Y SLI ++AS + A +FK+ EE+G R + ++L +Y + G+ K
Sbjct: 217 HIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG-CRPTLITYNVILNVYGKMGMPWSKI 275
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRG--YWAAVKVYEQLISQGCIPGQVTYASII 406
+V+SMK++ + +++ S RRG Y A +V+E++ + G P +VTY +++
Sbjct: 276 AGLVDSMKSSGVAPDLYTYNTLIS--SCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALL 333
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK------- 459
+ Y + +A +V EM+ GF +V Y+S+++ Y + G + +AM L ++
Sbjct: 334 DVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIK 393
Query: 460 ----------------------------MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
M+ GC+PN+ +N+L+ MHG N ++ K+
Sbjct: 394 PDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKV 453
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
++E++ + PD V++ T+++ + + + E + G V +R ++ +S+
Sbjct: 454 FEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSR 513
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
++ + + + M G D Y++ + AL GL Q++
Sbjct: 514 CGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSE 556
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/515 (19%), Positives = 231/515 (44%), Gaps = 7/515 (1%)
Query: 70 DSHHQTAV-PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
DS + V PD +++ + + +E A + E K F P+K T L+
Sbjct: 280 DSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVF--EEMKAAGFSPDKVTYNALLDVYG 337
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALL 187
+S++ + + ++ + P T + L+++ R A L + G + +
Sbjct: 338 KSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVF 397
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+ + + G+ K + V+E+M+ AG + + +++ + G+ ++ +F E
Sbjct: 398 TYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEI 457
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
K + P + L G++G E F++MK G + + + +LI +++
Sbjct: 458 KI--CECVP-DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRC 514
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
A +++ + G+ D ++ GL E++ V+ MK+ + K ++
Sbjct: 515 GFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTY 574
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
C++++ ++ + + E++ S P V +++ Y + L ++ E+ F+E+++
Sbjct: 575 CSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELRE 634
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
+GF + ++MV++YG+ + ++ +K G P++ YNSLM M+ R ++ +
Sbjct: 635 QGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEK 694
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
E + +E+ + + PD +S+ TVI AY R + + E + G D +
Sbjct: 695 SEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIA 754
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
++ S E + +++ M G K ++ Y+S ++
Sbjct: 755 SYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLID 789
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 102/202 (50%), Gaps = 6/202 (2%)
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
A II+ + S A + +++ G + AY+S++ Y GR R+A+ + K++
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248
Query: 463 KGCEPNVWIYNSLMDMHGR-AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
+GC P + YN +++++G+ ++ L M+ V PD +Y T+IS+ R ++
Sbjct: 249 EGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYE 308
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS-- 579
+ + E + G D+ ++ V+ K + E +++L++M++ G Y+S
Sbjct: 309 EAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLI 368
Query: 580 ---AMNALRDAGLQMQAQWLQQ 598
A + L D +++++Q +++
Sbjct: 369 SAYARDGLLDEAMELKSQMVKK 390
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 192/403 (47%), Gaps = 44/403 (10%)
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
+YK +E +F ++R+ ++ S + ++ LGK GRA A D++ G+
Sbjct: 159 FYK--KNELALCVFYFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGV 216
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL-MYIEEGLV-EKT 348
D Y SLI ++AS + A +FK+ EE+G R + ++L +Y + G+ K
Sbjct: 217 HIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG-CRPTLITYNVILNVYGKMGMPWSKI 275
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRG--YWAAVKVYEQLISQGCIPGQVTYASII 406
+V+SMK++ + +++ S RRG Y A +V+E++ + G P +VTY +++
Sbjct: 276 AGLVDSMKSSGVAPDLYTYNTLIS--SCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALL 333
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK------- 459
+ Y + +A +V EM+ GF +V Y+S+++ Y + G + +AM L ++
Sbjct: 334 DVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIK 393
Query: 460 ----------------------------MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
M+ GC+PN+ +N+L+ MHG N ++ K+
Sbjct: 394 PDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKV 453
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
++E++ + PD V++ T+++ + + + E + G V +R ++ +S+
Sbjct: 454 FEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSR 513
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
++ + + + M G D Y++ + AL GL Q++
Sbjct: 514 CGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSE 556
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/515 (19%), Positives = 230/515 (44%), Gaps = 7/515 (1%)
Query: 70 DSHHQTAV-PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
DS + V PD +++ + + +E A + E K F P+K T L+
Sbjct: 280 DSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVF--EEMKAAGFSPDKVTYNALLDVYG 337
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALL 187
+S++ + + ++ + P T + L+++ R A L + G + +
Sbjct: 338 KSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVF 397
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+ + + G+ K + V+E+M+ AG + + +++ + G+ ++ +F E
Sbjct: 398 TYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEI 457
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
K + P + L G++G E F++MK G + + + +LI +++
Sbjct: 458 KI--CECVP-DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRC 514
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
A +++ + G+ D ++ GL E++ V+ MK+ + K ++
Sbjct: 515 GFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTY 574
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
C++++ ++ + + E++ S P V +++ Y + L ++ E+ F+E+++
Sbjct: 575 CSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELRE 634
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
+GF + ++MV++YG+ + ++ +K G P++ YNSLM M+ R ++ +
Sbjct: 635 QGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEK 694
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
E + +E+ + + PD +S+ TVI AY R + + E + G D +
Sbjct: 695 SEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIA 754
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
++ S E + +++ M K ++ Y+S ++
Sbjct: 755 SYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLID 789
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 195/479 (40%), Gaps = 83/479 (17%)
Query: 104 YNEA----KKLPE--FRPEKSTLKLLIR-YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCS 156
Y EA KKL E RP T +++ Y W I L + K V PD +T +
Sbjct: 236 YREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYN 295
Query: 157 RLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L++SC R +Y V+E+MK+AG
Sbjct: 296 TLISSCRRG----------------------------------SLYEEAAEVFEEMKAAG 321
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
D Y +++ Y GKS R
Sbjct: 322 FSPDKVTYNALLDVY--------------------------------------GKSRRPR 343
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
EA++ ++M+ G Y SLI ++A + A EL + +KG+ D L+
Sbjct: 344 EAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLL 403
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+ + G + + V E M+ A + + C A++ R + +KV+E++ C+
Sbjct: 404 SGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECV 463
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P VT+ +++ + + + S+ VF EM++ GF ++++++ Y + G AM +
Sbjct: 464 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAI 523
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+M G P++ YN+++ R Q EK+ EM+ + P++++Y +++ AY
Sbjct: 524 YRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYAN 583
Query: 517 AREFDMCVKFYNEFRMNGGVIDR--AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+E + E + G+I+ + +V V+SK + E + +++ +G D
Sbjct: 584 GKEVERMSALAEE--IYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPD 640
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 200/461 (43%), Gaps = 53/461 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + L G K + + A + E + + +P T LI+ + ++
Sbjct: 394 PDVFTYTTLLSGFEKTGK-DDYAMKVFEEMR-VAGCQPNICTFNALIKMHGNRGNFVEMM 451
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
+ E+ KI +PD T NTLL VF +G +S + G
Sbjct: 452 KVFEEIKICECVPDIVTW----------------NTLLAVFGQNG------MDSEVSG-- 487
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS--T 255
V+++MK AG V + + ++ AY + G ++ A++ R LD+ T
Sbjct: 488 ----------VFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIY----RRMLDAGVT 533
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK---- 311
P Y + +L + G ++ K +MK+ + Y SL+ ++A+ EV+
Sbjct: 534 P-DLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSA 592
Query: 312 LAEELFKEAEEKGMLRDPEVCLK-LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
LAEE++ G++ V LK LVL+Y + L+ +T ++ A+
Sbjct: 593 LAEEIYS-----GIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAM 647
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
V+ + +RR ++ + G P TY S++ Y R + K+E + E+ KG
Sbjct: 648 VSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGM 707
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
++++++++ Y + GR+++A + A+MK G P+V YN+ + + +
Sbjct: 708 KPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAID 767
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+ K M + + P++ +Y ++I + + D F + R
Sbjct: 768 VVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLR 808
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 102/202 (50%), Gaps = 6/202 (2%)
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
A II+ + S A + +++ G + AY+S++ Y GR R+A+ + K++
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248
Query: 463 KGCEPNVWIYNSLMDMHGR-AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
+GC P + YN +++++G+ ++ L M+ V PD +Y T+IS+ R ++
Sbjct: 249 EGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYE 308
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS-- 579
+ + E + G D+ ++ V+ K + E +++L++M++ G Y+S
Sbjct: 309 EAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLI 368
Query: 580 ---AMNALRDAGLQMQAQWLQQ 598
A + L D +++++Q +++
Sbjct: 369 SAYARDGLLDEAMELKSQMVKK 390
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 169/381 (44%), Gaps = 19/381 (4%)
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
Y V +M G + D+ Y +++ E LF E K L + ++
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT--- 520
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y I+ DS K+G +A K+F +M+E G + Y +LI ++ +V A ELF+
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK--------LKISDCIS------ 367
+G L + L+ + + G VEK + E M +K K D S
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 368 --CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
A+++GF K A K+ + + +GC P Q+ Y ++I+ C++ +A++V EM
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+ GF + YSS++ Y K R A +++KM C PNV IY ++D +
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ KL + ME + P+ V+YT +I + + + C++ G + ++
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 546 VGVFSKLSQIEELVKLLQDMK 566
+ K ++ LL++MK
Sbjct: 821 IDHCCKNGALDVAHNLLEEMK 841
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/489 (22%), Positives = 201/489 (41%), Gaps = 59/489 (12%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA- 171
F P+ ST ++ YL + K + L E+ K ++ D +T + +V S +A + A
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 172 ---NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
N + +V T ++ + + + Y K ++E M S G + + Y ++
Sbjct: 539 KWFNEMREVGCTPN---VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 229 EAYYKIGDSEKVAALFLE-CKSRKL------------DSTPFSTHMYKILCDSLGKSGRA 275
+ + K G EK +F C S+ + +S + Y L D KS R
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRV 655
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
EA K M +G + +Y +LI + ++ A+E+ E E G P
Sbjct: 656 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF---PAT---- 708
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+Y L+++ V KR+ A KV +++ C
Sbjct: 709 --LYTYSSLIDRYFKV------------------------KRQDL--ASKVLSKMLENSC 740
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P V Y +I+ C++ +A K+ M++KG VV Y++M+ +G G+I +
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L+ +M +KG PN Y L+D + L L +EM++ Y VI +N
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN 860
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+EF + +E + ++ +++ K ++E ++LL+++ + L +
Sbjct: 861 --KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD- 917
Query: 576 LYHSAMNAL 584
Y S N+L
Sbjct: 918 -YSSTYNSL 925
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 114/553 (20%), Positives = 219/553 (39%), Gaps = 121/553 (21%)
Query: 104 YNEAKKLPE---FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVA 160
+ EA L E F P+ LI L ++ ++ + + + LP+ T S L+
Sbjct: 286 WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 345
Query: 161 SCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY--NKLHMYYSTILVYEKMKSAG- 216
C+ ++ +L + + +G + FNS + Y + H Y +L +KM G
Sbjct: 346 GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL--KKMVKCGH 403
Query: 217 --------IVLDSGC------YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMY 262
I++ S C C +++ K A + L K++ + F+
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL----NKINVSSFT---- 455
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
+ LC S GK +AF + R+M +G + D S Y+ ++ + ++++LA LF+E +
Sbjct: 456 RCLC-SAGKYEKAFSVI---REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
G++ D +V + + GL+E+
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQ----------------------------------- 536
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM-- 440
A K + ++ GC P VTY ++I+AY + S A ++F M +G +V YS++
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 441 ------------------------------------------VAMYG-------KTGRIR 451
V YG K+ R+
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+A L+ M +GCEPN +Y++L+D + L + +++ EM +Y+++I
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
Y + + D+ K ++ N + I M+ K+ + +E KL+Q M+ +G +
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Query: 572 LDERLYHSAMNAL 584
+ Y + ++
Sbjct: 777 PNVVTYTAMIDGF 789
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 179/385 (46%), Gaps = 7/385 (1%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ +N+ M GY K+ ++YE+M+ GI D + ++ +YK G E L +
Sbjct: 162 IMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKD 221
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA--SLICSF 304
L P ++ I L +GR EA++F DM EKG+ PSI A S+I ++
Sbjct: 222 ISVLGL--LP-DRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGL--SPSIIAFNSVIAAY 276
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ A E +K G+ P C L++ G +++ +++ M L +++
Sbjct: 277 SQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNN 336
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++ F KR A ++ ++ +G P V +++ I+ + L +A VF+E
Sbjct: 337 MAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLE 396
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M +KG AY+S++ + K G++ +A+ L M+ +G P+++ N ++ +
Sbjct: 397 MLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGR 456
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+R ++ +M + ++PD ++Y T+I+ Y +A + N +G D I
Sbjct: 457 MRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNI 516
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEG 569
+ F ++ V +L ++ S G
Sbjct: 517 RIHGFCSSRRMNRAVLMLDELVSAG 541
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/420 (19%), Positives = 171/420 (40%), Gaps = 5/420 (1%)
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
A C+R R A + I G ++ FN+ + + K +++ +K G
Sbjct: 100 ACCIRGRTSD-ALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFS 158
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
++ Y +M Y K+ + ++ L+ E + + + + + IL K GR +
Sbjct: 159 PNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGIT---FNILVSGHYKYGREEDG 215
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+ +D+ G+L D S++ + + A E + EKG+ ++
Sbjct: 216 DRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAA 275
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
Y + GL +K + + M + L S +++ G S A ++ Q+I +G
Sbjct: 276 YSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVN 335
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+ + +++ + + A+ ++ EM+++G VVA+S+ + K G + +A +
Sbjct: 336 NMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFL 395
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M KG PN + YNSL+ + L + KL K M R + PD + +I +
Sbjct: 396 EMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQG 455
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ + + G D ++ + K + L+ M + G+ D Y+
Sbjct: 456 RMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYN 515
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 136/322 (42%), Gaps = 41/322 (12%)
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
F+AL+ M+E G+ S A L + + +LFK+ +G P+ C
Sbjct: 2 GFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRG----PQPC-- 55
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
K S I+ GF ++ + +
Sbjct: 56 ------------------------KYTFS-----GIILGFCRKGCIHLGESLLHLMPKFH 86
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
C P Y +INA C S A F M ++G + VV +++++ + K G + +A
Sbjct: 87 CEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEAR 146
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA- 513
L +K G PN +YN+LM+ + + + + Q L++EM ++ + PD +++ ++S
Sbjct: 147 KLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGH 206
Query: 514 --YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
Y R + D +K + + G + DR++ I V +++E ++ L DM +G
Sbjct: 207 YKYGREEDGDRLLK---DISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLS 263
Query: 572 LDERLYHSAMNALRDAGLQMQA 593
++S + A AGL+ +A
Sbjct: 264 PSIIAFNSVIAAYSQAGLEDKA 285
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 141/349 (40%), Gaps = 39/349 (11%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y I+ ++ GR +AL +F M E+G + ++I +F V A +LF +
Sbjct: 94 YNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLK 153
Query: 322 EKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
E G P + LM Y++ +++ + E M+ + +V+G K
Sbjct: 154 EMGF--SPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGR 211
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
++ + + G +P + + ++ C +A + ++M +KG ++A++S
Sbjct: 212 EEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNS 271
Query: 440 MVAMYGK-----------------------------------TGRIRDAMWLVAKMKAKG 464
++A Y + GR+++A L+ +M KG
Sbjct: 272 VIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKG 331
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
N + L+D + ++ + LW EMERR + PD V+++ I ++ +
Sbjct: 332 LSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAY 391
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ E G + + ++ F K ++ E +KL + M+ G D
Sbjct: 392 NVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPD 440
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 79/407 (19%), Positives = 156/407 (38%), Gaps = 80/407 (19%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+A +++ ++G +K + + A Y E +K P+ T +L+ + + +
Sbjct: 159 PNAIMYNTLMNGYVKMREIDQ-ANMLYEEMRK-KGIAPDGITFNILVSGHYKYGREEDGD 216
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L +D + +LPD V+ A + A L + G +++AFNS + Y
Sbjct: 217 RLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAY 276
Query: 197 N------------KLHMYY---------STIL--------------VYEKMKSAGIVLDS 221
+ KL +++ S++L + +M G+ +++
Sbjct: 277 SQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNN 336
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEAL 279
+ +++ ++K GD +L+ E + R + D FS + D L K G EA
Sbjct: 337 MAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFI-----DGLSKQGLVEEAY 391
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
F +M KG++ + Y SLIC F ++ A +L K +G+L D ++
Sbjct: 392 NVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGL 451
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK-----------RRGYWA------ 382
++G + ++V M L ++NG+ K R Y +
Sbjct: 452 CKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDL 511
Query: 383 ------------------AVKVYEQLISQGCIPGQVTYASIINAYCR 411
AV + ++L+S G + +NA+ +
Sbjct: 512 TTYNIRIHGFCSSRRMNRAVLMLDELVSAGILSFSFACPPTLNAHTK 558
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 110/516 (21%), Positives = 225/516 (43%), Gaps = 51/516 (9%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P + L++ Y + E ++ + P +H + L+ + R + A +
Sbjct: 299 KPARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALS 358
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKL-------HMYYSTILVYEKMKSAGIVLDSGCYC 225
++ +G E++L+ ++ +GG+ K+ +M + LV E M+ GI Y
Sbjct: 359 CVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVRE-MEEEGIDAPIDIYH 417
Query: 226 QIMEAYYKIGDSEKVAALFLECK------------------------------SRKLDST 255
+M Y IG+ EK +F K S+ ++S
Sbjct: 418 TMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESA 477
Query: 256 PFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+M Y +L + K A F D+ + G+ D +Y ++I +F + + A
Sbjct: 478 GIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRA 537
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC----- 368
+ KE ++K + ++ + G + + L++ + M+ S CI
Sbjct: 538 IHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRR-----SGCIPTVHTFN 592
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
A+V G ++R AV++ +++ G P + TY +I+N Y + KA + F +++ +
Sbjct: 593 ALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNE 652
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G + V Y +++ K+GR++ A+ + +M A+ N ++YN L+D R ++ +
Sbjct: 653 GLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEA 712
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
L ++M++ V PD +YT+ I+A +A + K E G + ++
Sbjct: 713 ADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHG 772
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ S E+ ++ ++MK G K D+ +YH M +L
Sbjct: 773 WACASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSL 808
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 195/459 (42%), Gaps = 54/459 (11%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC- 247
F +G Y + + +E M+ GI S Y ++ AY D E+ L C
Sbjct: 305 FGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEA----LSCV 360
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFE------ALKFFRDMKEKGILEDPSIYASLI 301
+ K + S Y I+ K G A + A R+M+E+GI IY +++
Sbjct: 361 RKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMM 420
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEV----CLKLVLMYIEEGLVEKTLDVVESMKN 357
+ I + +FK +E G P V CL + MY + G V K L+V + M++
Sbjct: 421 NGYTMIGNEEKCLIVFKRLKECGFA--PSVISYGCL--INMYTKMGKVSKALEVSKMMES 476
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
A +K + ++NGF K + + A V+E +I G P V Y +II A+C + +
Sbjct: 477 AGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDR 536
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A + EMQ+K + ++ + + G +R A+ + M+ GC P V +N+L+
Sbjct: 537 AIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVL 596
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG--- 534
+ + + ++ EM V+PD+ +YTT+++ Y + +++ + R G
Sbjct: 597 GLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLEL 656
Query: 535 ---------------GVIDRAIA-----------------GIMVGVFSKLSQIEELVKLL 562
G + A+A I++ +++ + E L+
Sbjct: 657 DVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLM 716
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
Q MK EG + D Y S +NA AG ++A Q E
Sbjct: 717 QQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEME 755
>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
Length = 820
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 214/506 (42%), Gaps = 12/506 (2%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
E+ YNE K + P+ T ++ R L Q+KK D + + + V PDA S
Sbjct: 206 EMVLAAYNEMKCF-QLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSS 264
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
+ K+ +A +LQ + + +A+N M G K + E G
Sbjct: 265 FLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQG 324
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
D Y ++ +Y K+G+ + S +++ + H+ L K G
Sbjct: 325 SNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIET---NCHIVSYLLQCFRKLGMTS 381
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
EA+ +F K+ G+ D IY + ++ + A +L E + G+ D L+
Sbjct: 382 EAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLI 441
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
Y +G ++ V E M A ++ + +GF K + +++ QG
Sbjct: 442 SGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLE 501
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P +TY I +CR S+AE +F +++KG D V YSSMV Y +G A L
Sbjct: 502 PNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYML 561
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
++ +G + + + L++ R N++ + K M V PD +SY+ +IS Y +
Sbjct: 562 FVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQ 621
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ D ++++ G +D + I++ + K +++E +L M + G K D
Sbjct: 622 NGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIA 681
Query: 577 YHSAMNALRDAGLQMQAQWLQQNFEG 602
Y L D L+ + LQQ +EG
Sbjct: 682 Y----TVLLDGHLK---ETLQQGWEG 700
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 138/573 (24%), Positives = 222/573 (38%), Gaps = 66/573 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEA--KKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
PDA+ + SFL G L D +LAY E +K+P E +++ L + + D
Sbjct: 257 PDARGYSSFLIG-LCDCGKYDLAYVILQEINREKVP---VEAMAYNMVMDGLCKEMRLDE 312
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMG 194
L E+ PD + S L+ S + A + ++ G E + +
Sbjct: 313 AEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQ 372
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
+ KL M I + K K +G+ LD Y M+ Y K G+ + L E K L
Sbjct: 373 CFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGL-- 430
Query: 255 TPFSTH----------------------------------MYKILCDSLGKSGRAFEALK 280
TP H Y IL KSG E
Sbjct: 431 TPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFD 490
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
M ++G+ + Y I F + AE LF EEKG+ + +V Y+
Sbjct: 491 LLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYL 550
Query: 341 EEGLVEKT-LDVVESMKNAKLKISDCISCA-IVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
G + + V + L D SC+ ++N + A V + ++ +P
Sbjct: 551 LSGWTDHAYMLFVRVARQGNL--VDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPD 608
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
++Y+ +I+ YC+ KA F +M Q+G V+ Y+ ++ Y K GR+++A L
Sbjct: 609 VISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFV 668
Query: 459 KMKAKGCEPNVWIYNSLMDMH----------GRAKNLRQV------EKLWKEMERRKVTP 502
+M G +P+V Y L+D H G AK R KL M+ ++ P
Sbjct: 669 QMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEP 728
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D YT +I +A + ++E G D ++ + +I + LL
Sbjct: 729 DVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLL 788
Query: 563 QDMKSEGTKLDERLYHSAMN--ALRDAGLQMQA 593
Q+M +G + DE L S +N +LR +Q A
Sbjct: 789 QEMIDKGIEPDE-LTFSVLNQSSLRSRKIQFCA 820
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 155/393 (39%), Gaps = 38/393 (9%)
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYK 263
+TI ++ + G+V + +++ + G+ E V A + E K +L TP + +
Sbjct: 172 ATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQL--TP-DVYTFA 228
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
I+ SL ++ + EAL+ + +M E G+ D Y+S +
Sbjct: 229 IVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCD----------------- 271
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
C K L Y+ +++ + K+ + +++G K A
Sbjct: 272 --------CGKYDLAYV----------ILQEINREKVPVEAMAYNMVMDGLCKEMRLDEA 313
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
K+ E QG P Y+ +I +YC++ A + M G + S ++
Sbjct: 314 EKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQC 373
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+ K G +A+ K K G + IYN MD + + N+ + KL EM+ +TPD
Sbjct: 374 FRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPD 433
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
K+ YT +IS Y E + + E D I+ F K + E+ LL
Sbjct: 434 KIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLD 493
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M +G + + Y A+ G +A+ L
Sbjct: 494 RMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVL 526
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 122/336 (36%), Gaps = 32/336 (9%)
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
R A +F+D + G D S Y+ +I + + K+ LF E PE+ L
Sbjct: 79 RPAIAFAYFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSLFSELVSSSNASGPEI-L 137
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC----AIVNGFSK--RRG-------- 379
LV + +L + I CI+C A + FS R G
Sbjct: 138 PLVDHHRRTCATPCSLSFM-----VDCLIKACITCYDVQATICLFSGICRLGVVPSVWTW 192
Query: 380 ------------YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
Y + Y ++ P T+A + + + +A +V+ EM +
Sbjct: 193 NLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTE 252
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G YSS + G+ A ++ ++ + YN +MD + L +
Sbjct: 253 MGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDE 312
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
EKL + R+ PD Y+ +I +Y + V Y +G + I ++
Sbjct: 313 AEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQ 372
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
F KL E + K G LD+ +Y+ AM+
Sbjct: 373 CFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDT 408
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 191/450 (42%), Gaps = 40/450 (8%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
++N + G + + V+++M G+V + Y +++ + K GD E L
Sbjct: 17 FSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL--- 73
Query: 247 CKSRKLDSTPFSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ + L P + Y +L L ++GR E +M + D Y+ L
Sbjct: 74 -RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
E + LF E+ +KG++ C L+ ++G V K V+E + + L +
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 192
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
I ++NG+ + R A ++EQ+ S+ P +TY ++IN C++ + +KAE + +EM
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 252
Query: 426 QQKGFDKCVVAYSSMVAMYG-----------------------------------KTGRI 450
++ G D V +++++ YG K G+I
Sbjct: 253 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 312
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
+A+ ++ M K PN +YNS++D + + + Q L ++M+ V+ V+Y +
Sbjct: 313 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 372
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
+ R+ + D + R G D ++ ++ ++LLQ+M G
Sbjct: 373 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 432
Query: 571 KLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ R YH+ ++AL AG + L Q
Sbjct: 433 RPTLRTYHTLVSALASAGRVHDMECLYQQM 462
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 193/432 (44%), Gaps = 6/432 (1%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
H P+ ++ L G+ + + E +E F P+ T +L L ++ +
Sbjct: 79 HDGPKPNIVTYNVLLSGLCRAGRMDETRV-LMDEMASHSMF-PDGFTYSILFDGLTRTGE 136
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNS 191
+++SL + V+ A+TCS L+ + K A +L++ + G + + +N+
Sbjct: 137 SRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT 196
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ GY ++ ++E+MKS I D Y ++ K+ K L +E +
Sbjct: 197 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 256
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
+D S + L D+ G +G+ + DM++KGI D + S++ +F ++
Sbjct: 257 VDP---SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A + + K + + +V ++ YIE G E+ +VE MKN+ + S ++
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
G + A ++ L +QG P V+Y +II+A C KA ++ EM + G
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 433
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ Y ++V+ GR+ D L +M K EP+ IY ++D + R +N +V L
Sbjct: 434 PTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASL 493
Query: 492 WKEMERRKVTPD 503
KEM + + D
Sbjct: 494 KKEMSEKGIAFD 505
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 165/360 (45%), Gaps = 10/360 (2%)
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
R + P Y ++ L +SG+ +ALK F +M + G++ + Y ++I
Sbjct: 6 GRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGG 65
Query: 309 EVKLAEELFKEAEEKGMLRD---PEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKIS 363
+++ L + ML D P + VL+ G +++T +++ M + +
Sbjct: 66 DLEAGFRLRDQ-----MLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 120
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+ +G ++ + ++ + + +G + G T + ++N C+ +KAE+V
Sbjct: 121 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 180
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+ G V Y++++ Y + +R A + +MK++ P+ YN+L++ + +
Sbjct: 181 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 240
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ + E L EME+ V P ++ T+I AY A + + C ++ + G D G
Sbjct: 241 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 300
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
+V F K +I E V +L DM + + ++Y+S ++A ++G QA L + + +
Sbjct: 301 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNS 360
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 114/531 (21%), Positives = 245/531 (46%), Gaps = 16/531 (3%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+PD +++ ++G+ K+ + ++ A D E + P T +L+ L + + +
Sbjct: 7 LPDIVSYNTIINGLCKEKRLEK-AVDLLVEMEG-SSCEPNSFTYCILMDGLCKEGRVEEA 64
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVAS-CVRA---RKFKIANTLLQVFITDGEIALLAFNSA 192
+ L + K + D S L++ C + R + + +L+ I+ ++ ++
Sbjct: 65 MRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPN---VVVYSCL 121
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G+ K ++ V M GI D Y ++ K G + K LF + + K
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLF-DLMTEKG 180
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
+ ST Y +L + L K G +A K F M EKG + Y +LI + ++
Sbjct: 181 EEP--STVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDE 238
Query: 313 AEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A +LF E G +P+V ++ +EG ++K +++ ++M + + +C I
Sbjct: 239 AMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIE-RGSFGNLFTCHI 297
Query: 371 VNGFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+ G + G A+++++++ G +P TY+ +I+ +C++ + + A+ +F M+ G
Sbjct: 298 LIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISG 357
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ Y++++A K + A L +MK CEP+ +N ++D +A ++ +
Sbjct: 358 LSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAK 417
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+L +M++ +TPD +Y++ I+ ++ + + ++ +G D + ++ F
Sbjct: 418 ELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGF 477
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+IEE++ LL+ M G LD + +S + L ++ + L NF
Sbjct: 478 GLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNF 528
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%)
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+R + PD VSY T+I+ + + + V E + + I++ K +
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+EE ++LL +MK +G ++D +Y + ++ G
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKG 94
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 201/470 (42%), Gaps = 43/470 (9%)
Query: 154 TCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV--YE 210
T + L+ +C R + A L+ DG + + ++ + + + S +L+ Y+
Sbjct: 170 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 229
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
+++ + LD I+ + K GD K L ++ L + T + +L
Sbjct: 230 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSA---KTATLVSIISALA 286
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
SGR EA F ++++ GI Y +L+ + +K AE + E E++G+ D
Sbjct: 287 DSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEH 346
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-------- 382
L+ Y+ G E V++ M+ ++ + + ++ GF + RG W
Sbjct: 347 TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGF-RDRGEWQKTFQVLKE 405
Query: 383 ----------------------------AVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
A+ +++++S+G P +VT+ ++I+ +C+
Sbjct: 406 MKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 465
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+ AE++F M+++G C Y+ M+ YG R D L+ KMK++G PNV + +
Sbjct: 466 HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTT 525
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L+D++G++ + +EM+ + P Y +I+AY + + V + +G
Sbjct: 526 LVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDG 585
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ F + + E +LQ MK G K D Y + M AL
Sbjct: 586 LKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 635
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/378 (18%), Positives = 175/378 (46%), Gaps = 3/378 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++E+++ +GI + Y +++ Y K G + ++ E + R + H Y +L D
Sbjct: 297 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSP---DEHTYSLLID 353
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ +GR A ++M+ + + +++ L+ F E + ++ KE + G+
Sbjct: 354 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 413
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D + ++ + + ++ + + M + ++ +++ K + A +++
Sbjct: 414 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 473
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
E + +GC+P TY +IN+Y + +++ +M+ +G VV ++++V +YGK+
Sbjct: 474 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 533
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR DA+ + +MK+ G +P+ +YN+L++ + + Q ++ M + P ++
Sbjct: 534 GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLAL 593
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
++I+A+ R + NG D ++ ++ + +++ + ++M
Sbjct: 594 NSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIM 653
Query: 568 EGTKLDERLYHSAMNALR 585
G K D + +ALR
Sbjct: 654 SGCKPDRKARSMLRSALR 671
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 151/325 (46%), Gaps = 9/325 (2%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y IL +LG+S + +EA + +K L P Y +LI + A +++ A L +
Sbjct: 140 LYSILIHALGRSEKLYEAFL----LSQKQTLT-PLTYNALIGACARNNDIEKALNLIAKM 194
Query: 321 EEKGMLRDPEVCLKLVLMYI-EEGLVEKT--LDVVESMKNAKLKISDCISCAIVNGFSKR 377
+ G D V LV+ + ++ L + + ++ KL++ + I+ GF+K
Sbjct: 195 RQDGYQSD-FVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 253
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A+++ + G T SII+A +AE +F E++Q G AY
Sbjct: 254 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 313
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++++ Y KTG ++DA +V++M+ +G P+ Y+ L+D + A + KEME
Sbjct: 314 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 373
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
V P+ ++ +++ + E+ + E + G DR +++ F K + ++
Sbjct: 374 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 433
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMN 582
+ M SEG + D +++ ++
Sbjct: 434 AMTTFDRMLSEGIEPDRVTWNTLID 458
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/464 (21%), Positives = 202/464 (43%), Gaps = 4/464 (0%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ LV+SK + +++ LS+ + + P+ C+ L+ + A ++
Sbjct: 83 PPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 142
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ G + + F + + G L ++K+ + G D Y ++ K
Sbjct: 143 FAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCK 202
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G++ L + + MY + DS+ K EA F +M KGI D
Sbjct: 203 VGETRAALDLLQRVDGNLVQP---NVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPD 259
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y++LI F + ++ A +LF + + + D LV + ++G +++ V +
Sbjct: 260 VVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFD 319
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M +K + ++++G+ + A ++ + G P +Y+ +IN +C+I
Sbjct: 320 MMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIK 379
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ +A +F EM +K VV YSS++ K+GRI A+ LV +M +G P + YN
Sbjct: 380 KFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYN 439
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
S++D + + + L +++ + + P+ +Y+ +I ++ + + K + +
Sbjct: 440 SILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVK 499
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
G ++ IM+ F E + LL M+ G D + Y
Sbjct: 500 GHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 187/447 (41%), Gaps = 11/447 (2%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VPD F + + G+ Q Q+ A+ ++++ L F ++ + LI L + + +
Sbjct: 152 VPDTITFTTLIKGLCLKGQIQQ-AFLFHDKVVAL-GFHFDQISYGTLIHGLCKVGETRAA 209
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+ L + V P+ + ++ S + + A L I+ G ++ +++ + G
Sbjct: 210 LDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISG 269
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ L I ++ KM I D + ++ A+ K G ++ +F + +
Sbjct: 270 FCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPN 329
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
F T Y L D +A F M + G+ D Y+ +I F I + A
Sbjct: 330 -FVT--YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
LFKE K ++ D L+ + G + L +V+ M + + + +I++
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALC 446
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A+ + +L +G P TY+ +I C+ A KVF + KG + V
Sbjct: 447 KIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVD 506
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+ M+ + G +A+ L++KM+ GC P+ Y ++ + EKL +EM
Sbjct: 507 TYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDM 522
R V P +++ + + +E+D+
Sbjct: 567 IARGVRPRQIAI-----WFQKKKEYDV 588
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 202/451 (44%), Gaps = 5/451 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILV 208
P+ T S L+ +++ A L+ Q+F+T + + FN+ + G + + +
Sbjct: 763 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMAL 822
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
++M + G D Y ++ K GD++ L + + KL+ +Y + D
Sbjct: 823 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP---GVLIYNTIIDG 879
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L K +AL F++M+ KGI + Y+SLI + A L + E+ + D
Sbjct: 880 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 939
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ +++EG + + + + M + S +++NGF A +++E
Sbjct: 940 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 999
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++S+ C P VTY ++I +C+ + +VF EM Q+G V Y+ ++ + G
Sbjct: 1000 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 1059
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
A + +M + G PN+ YN+L+D + L + +++ ++R K+ P +Y
Sbjct: 1060 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 1119
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I +A + + + + G D M+ F + EE L ++MK +
Sbjct: 1120 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 1179
Query: 569 GTKLDERLYHSAMNA-LRDAGLQMQAQWLQQ 598
GT + Y++ + A LRD + A+ +++
Sbjct: 1180 GTLPNSGCYNTLIRARLRDGDREASAELIKE 1210
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/480 (21%), Positives = 205/480 (42%), Gaps = 41/480 (8%)
Query: 91 LKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLP 150
L+D + + A D +++ K F P L+ +V+ KK+D ++SL + ++ +
Sbjct: 164 LRDIKLND-AIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 221
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVY 209
D +T + ++ + +A ++L + G E + S + G+ + + + +
Sbjct: 222 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 281
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+KM G D Y I+++ K F E + + + + Y L + L
Sbjct: 282 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT---YTALVNGL 338
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
S R +A + DM +K I + Y++L+ +F +V A+ELF+E
Sbjct: 339 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEE---------- 388
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
+V M I+ +V + +++NG A ++++
Sbjct: 389 -----MVRMSIDPDIVTYS--------------------SLINGLCLHDRIDEANQMFDL 423
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
++S+GC+ V+Y ++IN +C+ K+F EM Q+G V Y++++ + + G
Sbjct: 424 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 483
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ A ++M G P++W YN L+ L + ++++M++R++ D V+YTT
Sbjct: 484 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 543
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
VI + + + + + G D M+ + E+ L MK EG
Sbjct: 544 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 603
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 189/440 (42%), Gaps = 8/440 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIA 171
++P T LI L K ++L + PD T +V C R
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
N L ++ E +L +N+ + G K + ++++M++ GI + Y ++
Sbjct: 856 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
G + L + RK++ F+ + L D+ K G+ EA K + +M ++ I
Sbjct: 916 CNYGRWSDASRLLSDMIERKINPDVFT---FSALIDAFVKEGKLVEAEKLYDEMVKRSI- 971
Query: 292 EDPSI--YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
DPSI Y+SLI F + A+++F+ K D L+ + + VE+ +
Sbjct: 972 -DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 1030
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+V M L + ++ G + A +++++++S G P +TY ++++
Sbjct: 1031 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 1090
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ KA VF +Q+ + + Y+ M+ K G++ D L + KG +P+V
Sbjct: 1091 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 1150
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
YN+++ R + + + L+KEM+ P+ Y T+I A R + + + E
Sbjct: 1151 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 1210
Query: 530 FRMNGGVIDRAIAGIMVGVF 549
R G D + G++ +
Sbjct: 1211 MRSCGFAGDASTIGLVTNML 1230
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 175/418 (41%), Gaps = 53/418 (12%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD-------SGCYCQIMEAYYKIGDS 237
+++ FN + KL Y I + +KM+ GI D C+C +
Sbjct: 187 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSL----- 241
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
AL + K KL P + L + + R +A+ M E G D Y
Sbjct: 242 ----ALSILGKMLKLGYEPDRVTIGS-LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY 296
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++I S V A + FKE E KG I +V T
Sbjct: 297 NAIIDSLCKTKRVNDAFDFFKEIERKG---------------IRPNVVTYT--------- 332
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
A+VNG + A ++ +I + P +TY+++++A+ + +
Sbjct: 333 -----------ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 381
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A+++F EM + D +V YSS++ RI +A + M +KGC +V YN+L++
Sbjct: 382 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 441
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+AK + KL++EM +R + + V+Y T+I + +A + D +F+++ G
Sbjct: 442 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 501
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
D I++G ++E+ + + +DM+ LD Y + + + G +++ W
Sbjct: 502 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG-KVEEAW 558
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 119/236 (50%), Gaps = 2/236 (0%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++VNGF +R AV + ++++ G P V Y +II++ C+ + A F E+++K
Sbjct: 263 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 322
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G VV Y+++V + R DA L++ M K PNV Y++L+D + + +
Sbjct: 323 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 382
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
++L++EM R + PD V+Y+++I+ D + ++ G + D ++
Sbjct: 383 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 442
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ--WLQQNFEG 602
F K ++E+ +KL ++M G + Y++ + AG +AQ + Q +F G
Sbjct: 443 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 498
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 111/600 (18%), Positives = 232/600 (38%), Gaps = 103/600 (17%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ + + K + + A+D++ E ++ RP T L+ L S +W
Sbjct: 291 PDIVAYNAIIDSLCKTKRVND-AFDFFKEIER-KGIRPNVVTYTALVNGLCNSSRWSDAA 348
Query: 138 SLSEDF---KI------YNVL--------------------------PDAHTCSRLVASC 162
L D KI Y+ L PD T S L+
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408
Query: 163 VRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
+ AN + + ++ G +A ++++N+ + G+ K + ++ +M G+V ++
Sbjct: 409 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 468
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCDSLGKSGRAFEAL 279
Y +++ +++ GD +K F ++D S + Y IL L +G +AL
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFF-----SQMDFFGISPDIWTYNILLGGLCDNGELEKAL 523
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
F DM+++ + D Y ++I +V+ A LF KG+ D ++
Sbjct: 524 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 583
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDC-----------------ISC-------------- 368
+GL+ + + MK L +DC +SC
Sbjct: 584 CTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGV 643
Query: 369 -----AIVNGFSKRRGY----------------WAAVKVYEQLISQGCIPGQVTYASIIN 407
+++ FS + Y AV ++ +++ P + ++ +++
Sbjct: 644 CKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLS 703
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
A ++ + + +MQ G YS ++ + + ++ A+ ++ KM G EP
Sbjct: 704 AIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP 763
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA---YNRAREFDMCV 524
N+ +SL++ + +K + + L +M P+ V++ T+I +N+A E +
Sbjct: 764 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE---AM 820
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ G D G++V K + LL M+ + +Y++ ++ L
Sbjct: 821 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 880
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 113/598 (18%), Positives = 224/598 (37%), Gaps = 110/598 (18%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + S ++G+ +D +EA ++ + K L ++ Y +
Sbjct: 396 PDIVTYSSLINGLC--------LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 447
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA------------ 185
+ + K++ + S V NTL+Q F G++
Sbjct: 448 RVEDGMKLFREMSQRGLVSNTVT----------YNTLIQGFFQAGDVDKAQEFFSQMDFF 497
Query: 186 -----LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
+ +N +GG ++++E M+ + LD Y ++ K G E+
Sbjct: 498 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 557
Query: 241 AALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
+LF L K K D ++T M L G E + MK++G++++
Sbjct: 558 WSLFCSLSLKGLKPDIVTYTTMM-----SGLCTKGLLHEVEALYTKMKQEGLMKND---- 608
Query: 299 SLICSFASITEVKLAEELFKEAEEKG----MLRDPE--VCLKLVLM-----------YIE 341
C+ + ++ L+ EL K+ G +L+D + VC K + + Y E
Sbjct: 609 ---CTLSD-GDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYRE 664
Query: 342 E----GLVEKTLD---------------------------------------VVESMKNA 358
+ GL E LD + E M+N
Sbjct: 665 KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 724
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+ + ++N F +R A+ V +++ G P VT +S++N YC S+A
Sbjct: 725 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 784
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+ +M G+ V +++++ + +AM L+ +M AKGC+P++ Y +++
Sbjct: 785 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 844
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ + L +ME+ K+ P + Y T+I + + D + + E G +
Sbjct: 845 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 904
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ + + +LL DM D + + ++A G ++A+ L
Sbjct: 905 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 962
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 220/490 (44%), Gaps = 5/490 (1%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A Y+N+ + F P + L+ LV+ K +DS+VS+ + + V +T + L+
Sbjct: 88 ALAYFNQMVHMNPF-PCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILI 146
Query: 160 ASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
+ ++L ++F + +++ FN+ + G + + + S G
Sbjct: 147 NCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQ 206
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
+ I+ KIG + AA+ K +LD P Y I+ DSL K+ EA
Sbjct: 207 PTVYTHTMIVNGLCKIGKTS--AAIVWMKKMVELDCEP-EVVSYSIIIDSLCKNRLVNEA 263
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+ F M+ GI Y SLI + + K A LFKE E M D LV
Sbjct: 264 VDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDA 323
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+EG+V + L V M ++ ++++G K + + + +++S+ P
Sbjct: 324 LCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPD 383
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
VT++ ++ +C+ + S+A+ + M ++G VV Y+S++ Y ++ +A +
Sbjct: 384 VVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFD 443
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
M KGC P+V YN L+ + +++ + + ++L+ EM + +TP+ +++TT+IS +A
Sbjct: 444 IMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAG 503
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ + + +G D ++ F K ++E + L + +K K + +
Sbjct: 504 RPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICK 563
Query: 579 SAMNALRDAG 588
+ + AG
Sbjct: 564 ILLGGMCKAG 573
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/419 (19%), Positives = 181/419 (43%), Gaps = 25/419 (5%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGI-------VLDSGCYCQIMEAYYKIGDSEKVA 241
FN + ++ Y S + +Y KM+ G+ + C C + + +G V
Sbjct: 107 FNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHL----HLVGLGFSVL 162
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS-- 299
K KL P S + L + L GR EA++ + +G P++Y
Sbjct: 163 G-----KIFKLGFKP-SIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY--QPTVYTHTM 214
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKN 357
++ I + A K+ E + +PEV +++ + LV + +D+ M++
Sbjct: 215 IVNGLCKIGKTSAAIVWMKKMVE--LDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRS 272
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ + +++ G + A ++++++ P VT++ +++A C+ + +
Sbjct: 273 IGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLE 332
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A VF +M Q + +V YSS++ K+ +++ L+ +M ++ P+V ++ +D
Sbjct: 333 ALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVD 392
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ + + + + + M R + P+ V+Y +++ Y + D K ++ G
Sbjct: 393 VFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAP 452
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
D I++ + K +I+E +L +M +G + + + ++ L AG A+ L
Sbjct: 453 DVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKEL 511
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 157/367 (42%), Gaps = 10/367 (2%)
Query: 108 KKLPEF--RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
KK+ E PE + ++I L +++ + V L + + P T + L+ +
Sbjct: 233 KKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNS 292
Query: 166 RKFKIANTLLQVFIT-DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
++K A+ L + + + + ++ F+ + K + + V+ KM + D Y
Sbjct: 293 GQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTY 352
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFF 282
++ K ++ + L E SR + D FS I D K G EA
Sbjct: 353 SSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFS-----IWVDVFCKKGMVSEAQSII 407
Query: 283 RDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
M E+G+ + Y SL+ + +++ A ++F KG D L+ Y +
Sbjct: 408 NLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKS 467
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
+++ + + M + L + +++G + +AA ++++++ S GC P +TY
Sbjct: 468 ERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITY 527
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+++++ +C+ +A +F +++ V ++ K G++ DA L + +
Sbjct: 528 STLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSI 587
Query: 463 KGCEPNV 469
+ +P+V
Sbjct: 588 EELQPDV 594
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 169/381 (44%), Gaps = 19/381 (4%)
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
Y V +M G + D+ Y +++ E LF E K L + ++
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT--- 520
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y I+ DS K+G +A K+F +M+E G + Y +LI ++ +V A ELF+
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK--------LKISDCIS------ 367
+G L + L+ + + G VEK + E M +K K D S
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 368 --CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
A+++GF K A K+ + + +GC P Q+ Y ++I+ C++ +A++V EM
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+ GF + YSS++ Y K R A +++KM C PNV IY ++D +
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ KL + ME + P+ V+YT +I + + + C++ G + ++
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 546 VGVFSKLSQIEELVKLLQDMK 566
+ K ++ LL++MK
Sbjct: 821 IDHCCKNGALDVAHNLLEEMK 841
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/489 (22%), Positives = 201/489 (41%), Gaps = 59/489 (12%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA- 171
F P+ ST ++ YL + K + L E+ K ++ D +T + +V S +A + A
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 172 ---NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
N + +V T ++ + + + Y K ++E M S G + + Y ++
Sbjct: 539 KWFNEMREVGCTPN---VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 229 EAYYKIGDSEKVAALFLE-CKSRKL------------DSTPFSTHMYKILCDSLGKSGRA 275
+ + K G EK +F C S+ + +S + Y L D KS R
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRV 655
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
EA K M +G + +Y +LI + ++ A+E+ E E G P
Sbjct: 656 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF---PAT---- 708
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+Y L+++ V KR+ A KV +++ C
Sbjct: 709 --LYTYSSLIDRYFKV------------------------KRQDL--ASKVLSKMLENSC 740
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P V Y +I+ C++ +A K+ M++KG VV Y++M+ +G G+I +
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L+ +M +KG PN Y L+D + L L +EM++ Y VI +N
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN 860
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+EF + +E + ++ +++ K ++E ++LL+++ + L +
Sbjct: 861 --KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD- 917
Query: 576 LYHSAMNAL 584
Y S N+L
Sbjct: 918 -YSSTYNSL 925
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 114/553 (20%), Positives = 219/553 (39%), Gaps = 121/553 (21%)
Query: 104 YNEAKKLPE---FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVA 160
+ EA L E F P+ LI L ++ ++ + + + LP+ T S L+
Sbjct: 286 WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 345
Query: 161 SCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY--NKLHMYYSTILVYEKMKSAG- 216
C+ ++ +L + + +G + FNS + Y + H Y +L +KM G
Sbjct: 346 GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL--KKMVKCGH 403
Query: 217 --------IVLDSGC------YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMY 262
I++ S C C +++ K A + L K++ + F+
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLN----KINVSSFT---- 455
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
+ LC S GK +AF + R+M +G + D S Y+ ++ + ++++LA LF+E +
Sbjct: 456 RCLC-SAGKYEKAFSVI---REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
G++ D +V + + GL+E+
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQ----------------------------------- 536
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM-- 440
A K + ++ GC P VTY ++I+AY + S A ++F M +G +V YS++
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 441 ------------------------------------------VAMYG-------KTGRIR 451
V YG K+ R+
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+A L+ M +GCEPN +Y++L+D + L + +++ EM +Y+++I
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
Y + + D+ K ++ N + I M+ K+ + +E KL+Q M+ +G +
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Query: 572 LDERLYHSAMNAL 584
+ Y + ++
Sbjct: 777 PNVVTYTAMIDGF 789
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/482 (20%), Positives = 203/482 (42%), Gaps = 33/482 (6%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + + LLI L + K+ + SL + + D S L+ ++ R AN L
Sbjct: 278 PSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGL 337
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ ++ G I + ++ + +K +++ M + G+ + Y ++E +++
Sbjct: 338 VHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFR 397
Query: 234 IGDSEKVAALFLECKSRKLDSTPFS-THMYKILCDS------------LGKSG------- 273
+ K L +E K R + +P++ K +C S +G SG
Sbjct: 398 EKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVI 457
Query: 274 ------------RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
R +A++ ++M+E+GI D Y SLI + ++ A E
Sbjct: 458 YTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMV 517
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E G D + YIE G V+ M + + + ++N + K+
Sbjct: 518 ENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVI 577
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A + ++ QG + TY ++N + + AE++F EM+ KG V +Y +++
Sbjct: 578 EACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLI 637
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ K G ++ A + +M G NV IYN L+ R+ + + ++L EM +
Sbjct: 638 DGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFP 697
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ V+Y T+I Y ++ + + ++E ++ G V D + +V +L+ +E + +
Sbjct: 698 PNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 757
Query: 562 LQ 563
+
Sbjct: 758 FE 759
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/457 (20%), Positives = 202/457 (44%), Gaps = 9/457 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP LI+ +Q ++ V + ++ + + PD + L+ +A+K A +
Sbjct: 452 RPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARS 511
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L + +G + + + + GY + + S ++M G++ + ++ Y
Sbjct: 512 FLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYC 571
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K G + + F +S Y +L + L K+G+ +A + F +M+ KGI
Sbjct: 572 KKGKVIEACSAF---RSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAP 628
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
D Y +LI F+ + ++ A +F E + G+ + + L+ + G +EK +++
Sbjct: 629 DVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELL 688
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ M + C I++G+ K A ++++++ +G +P Y ++++ CR+
Sbjct: 689 DEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRL 748
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSM---VAMYGKTGRIRDAM-WLVAKMKAKGCEPN 468
+A +F E +KG ++++ V +GKT D + L+ K +PN
Sbjct: 749 NDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPN 807
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
YN ++D + NL ++L+ M++ + P ++YT++++ Y++ ++
Sbjct: 808 DVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFD 867
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
E G D + +++ F K + + LL M
Sbjct: 868 EVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQM 904
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 168/381 (44%), Gaps = 19/381 (4%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYST 205
+L DA T + L+ V+ K A + G IA + ++ + + G++KL
Sbjct: 591 ILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG-IAPDVFSYGTLIDGFSKLGNMQKA 649
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
++++M AG+ + Y ++ + + G+ EK L E + P + Y +
Sbjct: 650 SSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGF---PPNAVTYCTI 706
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
D KSG EA + F +MK KG++ D +Y +L+ + +V+ A +F E EKG
Sbjct: 707 IDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGC 765
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL----KISDCISCAIVNGFSKRRGYW 381
L+ + G E T D++ + + K +D +++ K
Sbjct: 766 ASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLE 825
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
AA +++ + +P +TY S++N Y ++ S+ VF E+ G + + YS ++
Sbjct: 826 AAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVII 885
Query: 442 AMYGKTGRIRDAMWLVAKMKAK-----GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
+ K G A+ L+ +M AK GC+ ++ +L+ + + EK+ + M
Sbjct: 886 NAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMV 945
Query: 497 RRKVTPDKVSYTTVISAYNRA 517
R K PD +TVI N +
Sbjct: 946 RLKYIPDS---STVIELINES 963
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 171/429 (39%), Gaps = 57/429 (13%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P A+ + S + G ++ ++ Y+ E KK T ++ + S D
Sbjct: 383 PGARAYASLIEGFFREKNVRK-GYELLVEIKK-RNIVISPYTYGTAVKGMCSSGDLDGAY 440
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGG 195
++ ++ P+ + L+ + ++ +F A +L+ G IA +NS + G
Sbjct: 441 NIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQG-IAPDTFCYNSLIIG 499
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD---SEKVAALFLECKSRKL 252
+K +M G D+ Y + Y + G+ ++K LEC
Sbjct: 500 LSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLEC----- 554
Query: 253 DSTPFSTHMYKILCDSL----GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
K+LC L K G+ EA FR M E+GIL D Y L+
Sbjct: 555 -----GVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNG 609
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+V AEE+F E KG+ D V Y
Sbjct: 610 KVNDAEEIFHEMRGKGIAPD-------VFSY----------------------------G 634
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++GFSK A ++++++ G + Y ++ +CR KA+++ EM K
Sbjct: 635 TLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGK 694
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
GF V Y +++ Y K+G + +A L +MK KG P+ ++Y +L+D R ++ +
Sbjct: 695 GFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 754
Query: 489 EKLWKEMER 497
+++ E+
Sbjct: 755 ITIFETNEK 763
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 159/392 (40%), Gaps = 3/392 (0%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
+M S G+ D+ Y +++ K +++ L E S P MY +
Sbjct: 305 EMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPM---MYDYFICVMS 361
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
K G +A F M G+ YASLI F V+ EL E +++ ++ P
Sbjct: 362 KEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPY 421
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
V G ++ ++V+ M + + + I ++ F ++ + AV+V +++
Sbjct: 422 TYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEM 481
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
QG P Y S+I + +A +EM + GF Y + ++ Y + G
Sbjct: 482 REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEF 541
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
A V +M G PN + L++ + + + + ++ M + + D +YT +
Sbjct: 542 ASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVL 601
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
++ + + + + ++E R G D G ++ FSKL +++ + +M G
Sbjct: 602 MNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL 661
Query: 571 KLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+ +Y+ + +G +A+ L G
Sbjct: 662 TSNVIIYNMLLGGFCRSGEIEKAKELLDEMSG 693
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 108/525 (20%), Positives = 220/525 (41%), Gaps = 26/525 (4%)
Query: 11 CSSALINTTYTCMKKSYRHTLFSTCKAFPFVTVNPSSIINHRFFQVNASTNFPTIELNRD 70
CSS ++ Y +K+ S C+ P V + + I F Q S + + ++
Sbjct: 431 CSSGDLDGAYNIVKEMGA----SGCR--PNVVIYTTLI--KTFLQ--KSRFGDAVRVLKE 480
Query: 71 SHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQS 130
Q PD ++S + G+ K + E A + E + F+P+ T I +++
Sbjct: 481 MREQGIAPDTFCYNSLIIGLSKAKKMDE-ARSFLLEMVE-NGFKPDAFTYGAFISGYIEA 538
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAF 189
++ S ++ V+P+ C+ L+ + K A + + + G + +
Sbjct: 539 GEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTY 598
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
M G K ++ +M+ GI D Y +++ + K+G+ +K +++F E
Sbjct: 599 TVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQ 658
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
L S + +Y +L +SG +A + +M KG + Y ++I + +
Sbjct: 659 AGLTS---NVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGD 715
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
+ A +LF E + KG++ D V LV VE+ + + E+ + S + A
Sbjct: 716 LAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFN-A 774
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQG----CIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++N K + +L+ P VTY +I+ C+ A+++F M
Sbjct: 775 LINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHM 834
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
Q+ V+ Y+S++ Y K GR + + ++ A G EP+ +Y+ +++ +
Sbjct: 835 QKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMT 894
Query: 486 RQVEKLWKEMERRKVTPD--KVSYTT---VISAYNRAREFDMCVK 525
+ L +M + D K+S +T ++S + + E ++ K
Sbjct: 895 TKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 939
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 150/361 (41%), Gaps = 15/361 (4%)
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
+++ Y + G ++ +F K LD P S L D+L K R ++ M
Sbjct: 158 LIDGYIEKGFLDEAVFVFSSTKDLDLDLVP-SLARCNHLLDALLKRNRLDLFWDVYKGMV 216
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
E+ ++ D Y LI + V+LA+++ + EE+ L + ++E
Sbjct: 217 ERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEE---------LGTATLNVDE---- 263
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
L++ +SM L S +++G K++ A + ++ S G V Y+ +I
Sbjct: 264 -ALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILI 322
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
+ + A + EM GF + Y + + K G + A L M G
Sbjct: 323 DGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVT 382
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P Y SL++ R KN+R+ +L E+++R + +Y T + + + D
Sbjct: 383 PGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNI 442
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
E +G + I ++ F + S+ + V++L++M+ +G D Y+S + L
Sbjct: 443 VKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSK 502
Query: 587 A 587
A
Sbjct: 503 A 503
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 157/394 (39%), Gaps = 65/394 (16%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
R Q + DAK + ++G++K+ + + A + ++E + P+ + LI
Sbjct: 584 RSMVEQGILGDAKTYTVLMNGLVKNGKVND-AEEIFHEMRG-KGIAPDVFSYGTLIDGFS 641
Query: 129 Q-------SKKWDSIV--SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
+ S +D +V L+ + IYN+L + R+ + + A LL
Sbjct: 642 KLGNMQKASSIFDEMVQAGLTSNVIIYNML---------LGGFCRSGEIEKAKELLDEMS 692
Query: 180 TDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE 238
G + + + + GY K ++++MK G+V DS Y +++ ++ D E
Sbjct: 693 GKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 752
Query: 239 KVAALFLE----CKSR------------KLDSTPFSTHM-------------------YK 263
+ +F C S K T +T M Y
Sbjct: 753 RAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYN 812
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
I+ D L K G A + F M++ ++ Y SL+ + + +F E
Sbjct: 813 IMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAA 872
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM--KNA-----KLKISDCISCAIVNGFSK 376
G+ D + ++ +++EG+ K L +++ M KNA KL IS C A+++GF+K
Sbjct: 873 GIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCR--ALLSGFAK 930
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
A KV E ++ IP T +IN C
Sbjct: 931 VGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 207/490 (42%), Gaps = 44/490 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + ++ L +L + + Q + Y N K P T +L++ L ++ + D+
Sbjct: 142 PTVRIYNHLLDALLSENKFQMINPLYTNMKKD--GLIPNVFTYNILLKALCKNDRVDAAH 199
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
L + PDA T + +V+S +A K A L F + ++ +N+ + G
Sbjct: 200 KLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF----KPSVPVYNALIDGMC 255
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
K I + +M G+ + Y I+ + G+ E ALF + R D+
Sbjct: 256 KEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDA--- 312
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ H + L G+ +EAL ++ M + G + Y +LI S
Sbjct: 313 NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS----------- 361
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
G +E+ L V + M+ + + +++GF+K
Sbjct: 362 ------------------------NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKS 397
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A + + ++IS GC P VTY +++ C+ +++ +A + +M +G + +
Sbjct: 398 GDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTF 457
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++ + GR+ AM L+ +M+ GC PN+ YN L+D R + L++E+E
Sbjct: 458 NTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
R + P+ V+Y TV+ ++RA ++ + + + G D M+ + K +++
Sbjct: 518 RNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKI 577
Query: 558 LVKLLQDMKS 567
+L++ + S
Sbjct: 578 AAQLVERVSS 587
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 185/448 (41%), Gaps = 62/448 (13%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF-----LECK------SRKLDS-- 254
+ ++MK GI + I+ Y ++G +E+ +F CK + LD+
Sbjct: 96 ILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALL 155
Query: 255 --------TPFSTHM-----------YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
P T+M Y IL +L K+ R A K F +M KG D
Sbjct: 156 SENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAV 215
Query: 296 IYASLICSFASITEVKLAEEL---FK------EAEEKGMLRDP--EVCLKLVLMYIEEGL 344
Y +++ S ++ A EL FK A GM ++ EV +KL+ ++ G+
Sbjct: 216 TYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGV 275
Query: 345 VEKTLD---VVESM---KNAKLKIS--------DCIS-----CAIVNGFSKRRGYWAAVK 385
+ ++ S+ N +L + C + ++ G R + A+
Sbjct: 276 DPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALD 335
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+++ +I GC P V Y ++I+ C +A +V +MQ+ G V YS ++ +
Sbjct: 336 LWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFA 395
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K+G + A +M + GC PNV Y ++D+ + Q L ++M TP+ +
Sbjct: 396 KSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTM 455
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
++ T I + +K + +G + + ++ ++++ EE L Q++
Sbjct: 456 TFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI 515
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQA 593
++ + + Y++ + AG+ +A
Sbjct: 516 EARNLQPNLVTYNTVLYGFSRAGMMGEA 543
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 209/474 (44%), Gaps = 15/474 (3%)
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
+ L +++ L ++K + +S+ K P A T + ++ ++ + + L
Sbjct: 132 ADLSEVVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHE 191
Query: 178 FITDGEI--ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG 235
+G+ + ++ + + KL I ++++MK+ G+ + Y ++ Y+K G
Sbjct: 192 MCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSG 251
Query: 236 DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
D EK L E K + T F+ Y L LGKSGR +A F +M + G D
Sbjct: 252 D-EKALGLVQEMKDKGCAPTVFT---YTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVV 307
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL---MYIEEGLVEKTLDVV 352
+ +LI F ++ A +LF + + + P V + ++ + +
Sbjct: 308 LINNLINIFGKAGRLEDALKLFDQM--RSLKCAPNVVTYNTVIKALFESKAPASEAASWF 365
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
E MK + S +++GF K A+ + E++ +G P Y S+INA +
Sbjct: 366 EKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKA 425
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
Y A ++F+E+++ Y+ M+ GK GR +A+ L +MK GC P+V+ Y
Sbjct: 426 KRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAY 485
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N+LM RA + + + ME TPD S+ +++ R + + + +M
Sbjct: 486 NALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMF--MKM 543
Query: 533 NGGVI--DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+I D ++G S+ EE KL+++M S G + D Y S + A+
Sbjct: 544 KDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAV 597
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/490 (20%), Positives = 213/490 (43%), Gaps = 4/490 (0%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A D + ++ +P + L+ L++S KWD S F+ + P+ T + L+
Sbjct: 97 ALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILI 156
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
R ++F A LL G + ++ + + K + ++++M G+
Sbjct: 157 KISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVT 216
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
D CY +++ ++K GD + ++ + K S + Y ++ + L K G+ E+
Sbjct: 217 PDVACYNILIDGFFKKGDILNASEIWE--RLLKGPSVYPNIPSYNVMINGLCKCGKFDES 274
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+ + MK+ +D Y++LI + A ++KE E G+ D V ++
Sbjct: 275 FEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNG 334
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
Y+ G +E+ L++ + M+ + + ++ G + A+ ++E L + C
Sbjct: 335 YLRAGRIEECLELWKVMEKEGCRTVVSYN-ILIRGLFENAKVDEAISIWELLPEKDCCAD 393
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+TY +++ C+ +KA + E + D AYSSM+ + GR+ + ++
Sbjct: 394 SMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLD 453
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M GC+PN + N++++ RA L + + M + P V+Y T+I+ ++A
Sbjct: 454 QMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 513
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
F E G + +++ + +++ + L +G K D ++++
Sbjct: 514 RFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 573
Query: 579 SAMNALRDAG 588
++ L +G
Sbjct: 574 IIIHGLCSSG 583
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 151/322 (46%), Gaps = 4/322 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY++M G+ D Y ++ Y + G E+ L+ + ++ T S Y IL
Sbjct: 312 VYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW-KVMEKEGCRTVVS---YNILIR 367
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L ++ + EA+ + + EK D Y L+ + A + +EAE
Sbjct: 368 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 427
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D ++ EG +++ V++ M K + + A++NGF + A++ +
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
++S+GC P VTY ++IN + +S+A + EM KG+ ++ YS ++ +
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
++ A+ L + KG +P+V ++N ++ + + +L+ EM++RK P+ V++
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607
Query: 508 TTVISAYNRAREFDMCVKFYNE 529
T++ + + R+F+ K ++
Sbjct: 608 NTLMEGFYKVRDFERASKIWDH 629
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 128/317 (40%), Gaps = 11/317 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTL--KLLIRYLVQSKKWDS 135
PD +++ L+G L+ + +E E K+ E ++ + +LIR L ++ K D
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECL-----ELWKVMEKEGCRTVVSYNILIRGLFENAKVDE 377
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFNSAMG 194
+S+ E + D+ T LV C K + L + G++ A++S +
Sbjct: 378 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 437
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
G + V ++M G + ++ + + E F S+
Sbjct: 438 GLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 497
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
T + Y L + L K+ R EA ++M KG + Y+ L+ ++ +A
Sbjct: 498 TVVT---YNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMAL 554
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
L+ +A EKG D ++ ++ G VE L + MK K + ++ GF
Sbjct: 555 NLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614
Query: 375 SKRRGYWAAVKVYEQLI 391
K R + A K+++ ++
Sbjct: 615 YKVRDFERASKIWDHIL 631
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 155/390 (39%), Gaps = 44/390 (11%)
Query: 75 TAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
+ P+ ++ ++G+ K + E +++ ++ KK E + T LI L S D
Sbjct: 250 SVYPNIPSYNVMINGLCKCGKFDE-SFEIWHRMKK-NERGQDLYTYSTLIHGLCGSGNLD 307
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMG 194
+ ++ V PD + ++ +RA + + L +V +G ++++N +
Sbjct: 308 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIR 367
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
G + I ++E + DS Y ++ K G K ++ E ++ + D
Sbjct: 368 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 427
Query: 255 TPFS-THMYKILC------------DSLGKSG-------------------RAFEALKFF 282
F+ + M LC D + K G + +AL+FF
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487
Query: 283 RDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
+M KG Y +LI + A L KE KG P + +LM
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW--KPNMITYSLLM---N 542
Query: 343 GLVE-KTLDVVESMKNAKL----KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
GL + K LD+ ++ L K + I++G A+++Y ++ + C+P
Sbjct: 543 GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVP 602
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
VT+ +++ + ++ + +A K++ + Q
Sbjct: 603 NLVTHNTLMEGFYKVRDFERASKIWDHILQ 632
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 217/509 (42%), Gaps = 77/509 (15%)
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE 183
+R +V++ + + E+ + +PD C+ L+ R K + A +L++ G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 184 IA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVL----------DSGCYCQIMEAYY 232
+ ++ +N + GY K + + V ++M + V+ DSG Q ME
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 233 KI--------------------GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKS 272
++ DS A+ L + R TP Y +L + + K
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP-DVVTYNVLVNGICKE 287
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
GR EA+KF DM G + + ++ S S AE+L + KG P V
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF--SPSVV 345
Query: 333 LKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
+L+ +GL+ + +D++E M + + +++GF K + A++ E++
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+S+GC P VTY +++ A C K G++
Sbjct: 406 VSRGCYPDIVTYNTMLTALC-----------------------------------KDGKV 430
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
DA+ ++ ++ +KGC P + YN+++D +A + KL EM + + PD ++Y+++
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 511 ISAYNRAREFDMCVKFYNEF-RMNGGVIDRAIA--GIMVGVFSKLSQIEELVKLLQDMKS 567
+ +R + D +KF++EF RM G+ A+ IM+G K Q + + L M +
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERM--GIRPNAVTFNSIMLG-LCKSRQTDRAIDFLVFMIN 547
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQAQWL 596
G K +E Y + L G+ +A L
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALEL 576
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/358 (17%), Positives = 136/358 (37%), Gaps = 53/358 (14%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T +L+ + + + D + D P+ T + ++ S ++ A L
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L + G +++ FN + + + I + EKM G +S Y ++ +
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF-- 389
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
CK +K+D A+++ M +G D
Sbjct: 390 -------------CKEKKMD-----------------------RAIEYLERMVSRGCYPD 413
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVE----- 346
Y +++ + +V+ A E+ + KG C +++ Y + +GL +
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKG-------CSPVLITYNTVIDGLAKAGKTG 466
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
K + +++ M+ LK ++V G S+ A+K + + G P VT+ SI+
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
C+ +A + M +G +Y+ ++ G ++A+ L+ ++ KG
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 198/494 (40%), Gaps = 7/494 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F++ LH + + E K+ K T + IR L + + + V
Sbjct: 113 PDVATFNNVLHALCQKGDIMESGALLAKVLKR--GMSVNKFTCNIWIRGLCEGGRLEEAV 170
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL-LAFNSAMGGY 196
+L E Y + PD T + L+ + K + A L+ + G I +N+ + GY
Sbjct: 171 ALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGY 229
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K M + + G V D YC ++ GD E+ LF E +++ L
Sbjct: 230 CKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKP-- 287
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+Y L L + G AL+ +M E G D Y +I + + A +
Sbjct: 288 -DLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVV 346
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+A KG L D ++ Y + ++ L +VE M + +++NG K
Sbjct: 347 MNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCK 406
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ +E++I +GC P +TY +I +C+I +A V + M Q G ++
Sbjct: 407 AGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTIS 466
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
+++++ + + G + A L K+ KG +N L+ + N++ EK++ EM
Sbjct: 467 FNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMI 526
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ PD +Y ++ +A D E G V A G ++ + ++
Sbjct: 527 SKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVS 586
Query: 557 ELVKLLQDMKSEGT 570
E V ++ M G
Sbjct: 587 EAVAIIHIMVRMGV 600
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 179/414 (43%), Gaps = 7/414 (1%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
A+N+ M + VY +M SAG+ D+ + ++++ G L
Sbjct: 12 AYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSL 71
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
R D P + Y + L G ++A F +M + + D + + +++ +
Sbjct: 72 PERGCDVKPLA---YCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQK 128
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++ + L + ++GM + C + E G +E+ + +VESM +A +
Sbjct: 129 GDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTY 187
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++ G K A + ++++QGCIP TY +II+ YC+ + +A ++ +
Sbjct: 188 NTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIF 247
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
KGF V Y S++ G + A+ L + +AK +P++ +YNSL+ R +
Sbjct: 248 KGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILH 307
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
++ EM PD +Y VI+ + N+ + G + D M+
Sbjct: 308 ALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMID 367
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ K +++ ++L++ M G D Y+S +N L AG +A+ + + FE
Sbjct: 368 GYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAG---KAKEVNETFE 418
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 108/499 (21%), Positives = 196/499 (39%), Gaps = 69/499 (13%)
Query: 147 NVLPDAHTCS-RLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYS 204
V PDA T + R+ + C+ R +A LL+ G ++ LA+ + + G Y
Sbjct: 40 GVAPDARTHTVRIKSFCITGRP-HVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYD 98
Query: 205 TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--- 261
++++M + D + ++ A + GD + AL + R + F+ ++
Sbjct: 99 ARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIR 158
Query: 262 ----------------------------YKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
Y L L K + EA ++ R M +G + D
Sbjct: 159 GLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPD 218
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y ++I + ++ A EL K+A KG + D L+ EG VE+ L++
Sbjct: 219 DFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFN 278
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+ LK + ++V G ++ A++V +++ GC P TY +IN C++
Sbjct: 279 EAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMG 338
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM------------- 460
S A V + KG+ V +++M+ Y K ++ A+ LV +M
Sbjct: 339 NISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYN 398
Query: 461 ----------KAK------------GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
KAK GC PN YN L++ + L + + M +
Sbjct: 399 SVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQD 458
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ PD +S+ T+I + R + D + + G I++G +S ++
Sbjct: 459 GLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMA 518
Query: 559 VKLLQDMKSEGTKLDERLY 577
K+ +M S+G K D Y
Sbjct: 519 EKIFGEMISKGYKPDLYTY 537
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 159/405 (39%), Gaps = 41/405 (10%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
EL +D+ + VPD + S ++G+ + E A + +NEA+ + +P+ L++
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDV-ERALELFNEAQA-KDLKPDLVVYNSLVK 297
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA 185
L + + + + PD T + ++ + A ++ I G +
Sbjct: 298 GLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLP 357
Query: 186 -LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+ FN+ + GY K S + + E+M GI D+ Y ++ K G +++V F
Sbjct: 358 DVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETF 417
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E + + Y IL ++ K + EA M + G++ D + +LI F
Sbjct: 418 EEMILKGCRPNAIT---YNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGF 474
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
++ A LF++ +EKG T D
Sbjct: 475 CRNGDLDGAYLLFQKLDEKGY--------------------SATADTFN----------- 503
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
++ +S + A K++ ++IS+G P TY +++ C+ A +A E
Sbjct: 504 ----ILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAE 559
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
M KGF + + ++ R+ +A+ ++ M G P V
Sbjct: 560 MVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEV 604
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 8/209 (3%)
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
GC P Y +I++A A + +A KV++ M G ++ + + TGR A
Sbjct: 5 GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMD---MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
+ L+ + +GC+ Y +++ HG + R L+ EM RR V PD ++ V
Sbjct: 65 LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARH---LFDEMLRRDVFPDVATFNNV 121
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
+ A + + + G +++ I + + ++EE V L++ M +
Sbjct: 122 LHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-I 180
Query: 571 KLDERLYHSAMNAL-RDAGLQMQAQWLQQ 598
D Y++ M L +D+ +Q AQ+L++
Sbjct: 181 APDVVTYNTLMRGLCKDSKVQEAAQYLRR 209
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 169/381 (44%), Gaps = 19/381 (4%)
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
Y V +M G + D+ Y +++ E LF E K L + ++
Sbjct: 423 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT--- 479
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y I+ DS K+G +A K+F +M+E G + Y +LI ++ +V A ELF+
Sbjct: 480 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 539
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK--------LKISDCIS------ 367
+G L + L+ + + G VEK + E M +K K D S
Sbjct: 540 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 599
Query: 368 --CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
A+++GF K A K+ + + +GC P Q+ Y ++I+ C++ +A++V EM
Sbjct: 600 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 659
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+ GF + YSS++ Y K R A +++KM C PNV IY ++D +
Sbjct: 660 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 719
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ KL + ME + P+ V+YT +I + + + C++ G + ++
Sbjct: 720 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 779
Query: 546 VGVFSKLSQIEELVKLLQDMK 566
+ K ++ LL++MK
Sbjct: 780 IDHCCKNGALDVAHNLLEEMK 800
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 114/514 (22%), Positives = 236/514 (45%), Gaps = 43/514 (8%)
Query: 104 YNEAKKLPE---FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVA 160
+ EA L E F P+ LI L ++ ++ + + + LP+ T S L+
Sbjct: 245 WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 304
Query: 161 SCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY--NKLHMYYSTILVYEKMKSAG- 216
C+ ++ +L + + +G + FNS + Y + H Y +L +KM G
Sbjct: 305 GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL--KKMVKCGH 362
Query: 217 --------IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS--RKLDSTPFSTHMYKILC 266
I++ S C + + + +EK + L K++ + F+ + LC
Sbjct: 363 MPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFT----RCLC 418
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
S GK +AF + R+M +G + D S Y+ ++ + ++++LA LF+E + G++
Sbjct: 419 -SAGKYEKAFSVI---REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 474
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D +V + + GL+E+ M+ + A+++ + K + A ++
Sbjct: 475 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 534
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF-----------IEMQQKGFD---- 431
+E ++S+GC+P VTY+++I+ +C+ KA ++F ++M K +D
Sbjct: 535 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 594
Query: 432 -KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
VV Y +++ + K+ R+ +A L+ M +GCEPN +Y++L+D + L + ++
Sbjct: 595 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 654
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
+ EM +Y+++I Y + + D+ K ++ N + I M+
Sbjct: 655 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 714
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
K+ + +E KL+Q M+ +G + + Y + ++
Sbjct: 715 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 748
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/489 (22%), Positives = 201/489 (41%), Gaps = 59/489 (12%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA- 171
F P+ ST ++ YL + K + L E+ K ++ D +T + +V S +A + A
Sbjct: 438 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 497
Query: 172 ---NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
N + +V T ++ + + + Y K ++E M S G + + Y ++
Sbjct: 498 KWFNEMREVGCTPN---VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 554
Query: 229 EAYYKIGDSEKVAALFLE-CKSRKL------------DSTPFSTHMYKILCDSLGKSGRA 275
+ + K G EK +F C S+ + +S + Y L D KS R
Sbjct: 555 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRV 614
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
EA K M +G + +Y +LI + ++ A+E+ E E G P
Sbjct: 615 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF---PAT---- 667
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+Y L+++ V KR+ A KV +++ C
Sbjct: 668 --LYTYSSLIDRYFKV------------------------KRQDL--ASKVLSKMLENSC 699
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P V Y +I+ C++ +A K+ M++KG VV Y++M+ +G G+I +
Sbjct: 700 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 759
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L+ +M +KG PN Y L+D + L L +EM++ Y VI +N
Sbjct: 760 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN 819
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+EF + +E + ++ +++ K ++E ++LL+++ + L +
Sbjct: 820 --KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD- 876
Query: 576 LYHSAMNAL 584
Y S N+L
Sbjct: 877 -YSSTYNSL 884
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 131/332 (39%), Gaps = 9/332 (2%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S Y L + K+ R A R+M + D +L C S+ +V E
Sbjct: 193 SRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDG---FTLRCFAYSLCKVGKWREAL 249
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E + + D KL+ E L E+ +D + M+ + ++ G +
Sbjct: 250 TLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNK 309
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
+ +V ++ +GC P + S+++AYC +S A K+ +M + G V Y
Sbjct: 310 KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVY 369
Query: 438 SSMV-AMYGKTGRIR-DAMWLVAK----MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ ++ ++ G + D + L K M A G N +S A + +
Sbjct: 370 NILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSV 429
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+EM + PD +Y+ V++ A + ++ + E + G V D IMV F K
Sbjct: 430 IREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCK 489
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
IE+ K +M+ G + Y + ++A
Sbjct: 490 AGLIEQARKWFNEMREVGCTPNVVTYTALIHA 521
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/516 (22%), Positives = 233/516 (45%), Gaps = 37/516 (7%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
EF P+ +I L ++ ++ + + + LP+ T L+ C+ K
Sbjct: 37 EFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRC 96
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG-----IVLDS--GC 223
+L + IT+G + FNS + Y + Y + +KM G +V + G
Sbjct: 97 KRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGG 156
Query: 224 YCQIMEAYYKIGD-SEKVAALFLECKS--RKLDSTPFSTHMYKILCDSLGKSGRAFEALK 280
C E + D +EK LE K++ + FS + LC +GK +A+ +
Sbjct: 157 ICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFS----RCLC-GIGKFEKAYNVI- 210
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
R+M KG + D S Y+ +I + ++V+ A +LF+E + G+ D V L+ +
Sbjct: 211 --REMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFC 268
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ G +E+ + + M+ + A+++ + K R A +VYE ++S+GC P V
Sbjct: 269 KAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIV 328
Query: 401 TYASIINAYCRIALYSKAEKVF------------IEMQQKGFDKC-----VVAYSSMVAM 443
TY ++I+ C+ KA +++ ++M + D V Y ++V
Sbjct: 329 TYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDG 388
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K ++++A L+ M +GCEPN +Y++L+D +A L + ++++ M P+
Sbjct: 389 LCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPN 448
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+Y+++I + + D+ +K ++ N + I M+ K+ + +E KL+
Sbjct: 449 VYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMV 508
Query: 564 DMKSEGTKLDERLYHSAMNALRDAG-LQMQAQWLQQ 598
M+ +G + Y + ++ +G ++ + LQQ
Sbjct: 509 MMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQ 544
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 187/441 (42%), Gaps = 23/441 (5%)
Query: 143 FKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMY 202
+ +YN+L S V K +L+ + ++ + F+ + G K
Sbjct: 147 YVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKA 206
Query: 203 YSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMY 262
Y+ I +M S G + D+ Y +++ EK LF E K + ++Y
Sbjct: 207 YNVI---REMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAP---DVYVY 260
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
L DS K+G +A +F +M+ G + Y +LI ++ +V A E+++
Sbjct: 261 TTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLS 320
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC----------------- 365
KG + L+ + G +EK + + MK ++I D
Sbjct: 321 KGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVF 380
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
A+V+G K A + + + +GC P V Y ++I+ C+ +A++VF M
Sbjct: 381 TYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTM 440
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+ G+D V YSS++ K R+ A+ +++KM C PNV IY ++D +
Sbjct: 441 LECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 500
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ KL ME + P+ V+YT +I + ++ + C++ + G + ++
Sbjct: 501 DEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVL 560
Query: 546 VGVFSKLSQIEELVKLLQDMK 566
+ ++E KLL++MK
Sbjct: 561 INHCCSTGLLDEAHKLLEEMK 581
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 194/470 (41%), Gaps = 52/470 (11%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ ST +I YL + K + L ++ K + PD + + L+ S +A + A
Sbjct: 218 FIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQAR 277
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
DG ++ + + + Y K VYE M S G + Y +++
Sbjct: 278 NWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGL 337
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHM--------------YKILCDSLGKSGRAFE 277
K G EK + ++ K ++ H Y L D L K+ + E
Sbjct: 338 CKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKE 397
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
A + M +G + +Y +LI ++ A+E+F E G DP V
Sbjct: 398 ARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGY--DPNV------ 449
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
Y L+++ K+ +L + A+KV +++ C P
Sbjct: 450 -YTYSSLIDRLF------KDKRLDL--------------------ALKVLSKMLENSCAP 482
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
V Y +I+ C++ +A K+ + M++KG + VV Y++M+ +GK+GR+ + L+
Sbjct: 483 NVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELL 542
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+M +KGC PN Y L++ L + KL +EM++ Y VI +N
Sbjct: 543 QQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFN-- 600
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
REF + E N V + +++ F K ++E ++L +++ S
Sbjct: 601 REFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSS 650
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 177/412 (42%), Gaps = 23/412 (5%)
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
N +L++ + ++ + F + K Y+ I +M S G + DS Y +++
Sbjct: 76 NEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVI---REMMSKGFIPDSSTYSKVIGYL 132
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
EK LF E K + TP + Y L D K G +A +F +M++ G
Sbjct: 133 CNASKVEKAFQLFQEMKRNGI--TP-DVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCA 189
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y +LI ++ ++ A E+F+ G + + L+ + + G EK +
Sbjct: 190 PNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQI 249
Query: 352 VESMKNAKLKISDC-----------------ISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
MKN K+ I D A+V+G K A + E + +G
Sbjct: 250 YARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEG 309
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
C P Q+ Y ++I+ +C++ +A++VF +M G V YSS++ K R+ A+
Sbjct: 310 CEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLAL 369
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
++ KM C PNV IY ++D + + +L ME + P+ V+YT +I +
Sbjct: 370 KVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGF 429
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+A D C++ G + +++ +++ KLL++MK
Sbjct: 430 GKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMK 481
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 198/430 (46%), Gaps = 36/430 (8%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAG---------IVLDSGCYCQIMEAYYKIGDS 237
+ FNS + Y + Y+ + +KM G I++ C + + + IG +
Sbjct: 12 MIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLA 71
Query: 238 EKVAALFLECKS--RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
E+ LE K++ F+ + LC +GK +A+ + R+M KG + D S
Sbjct: 72 ERAYNEMLEMGVVLNKVNVCNFT----RCLC-CIGKFEKAYNVI---REMMSKGFIPDSS 123
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
Y+ +I + ++V+ A +LF+E + G+ D L+ + + GL+E+ + + M
Sbjct: 124 TYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEM 183
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+ + A+++ + K R A +++E ++S GC+P VTY ++I+ +C+
Sbjct: 184 QQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGET 243
Query: 416 SKAEKVFIEMQQKGFD-----------------KCVVAYSSMVAMYGKTGRIRDAMWLVA 458
KA +++ M+ D VV Y ++V K ++++A L+
Sbjct: 244 EKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLE 303
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
M +GCEPN IY++L+D + L + ++++ +M +P+ +Y+++I + +
Sbjct: 304 TMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDK 363
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
D+ +K + N + I MV K+ + +E +L+ M+ +G + Y
Sbjct: 364 RLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYT 423
Query: 579 SAMNALRDAG 588
+ ++ AG
Sbjct: 424 AMIDGFGKAG 433
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 195/470 (41%), Gaps = 52/470 (11%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ ST +I YL + K + L ++ K + PD +T + L+ + + A
Sbjct: 118 FIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQAR 177
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
DG ++ + + + Y K ++E M S G V + Y +++ +
Sbjct: 178 NWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGH 237
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHM--------------YKILCDSLGKSGRAFE 277
K G++EK ++ K+ K+D + Y L D L K+ + E
Sbjct: 238 CKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKE 297
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
A M +G + IY +LI F + ++ A+E+F + G P V
Sbjct: 298 ARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGC--SPNV------ 349
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
Y L++K K+ +L + A+KV +++ C P
Sbjct: 350 -YTYSSLIDKLF------KDKRLDL--------------------ALKVLTKMLENSCAP 382
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
V Y +++ C++ +A ++ + M++KG VV Y++M+ +GK GR+ + L+
Sbjct: 383 NVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELL 442
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
M +KGC PN Y L++ A L KL +EM++ Y VI + +
Sbjct: 443 QLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--S 500
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
EF + E +G V + +++ F K ++E ++L +++ S
Sbjct: 501 HEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSS 550
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/240 (18%), Positives = 98/240 (40%), Gaps = 41/240 (17%)
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT-- 447
+I++GC P + + S+++AYCR Y A K+ +M G+ V Y+ ++ T
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61
Query: 448 ---------------------------------------GRIRDAMWLVAKMKAKGCEPN 468
G+ A ++ +M +KG P+
Sbjct: 62 LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
Y+ ++ A + + +L++EM+R +TPD +YTT++ + + + +++
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E + +G + ++ + K ++ ++ + M S G + Y + ++ AG
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/496 (21%), Positives = 213/496 (42%), Gaps = 20/496 (4%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLS 140
F + H + P ++ +D ++ + R S ++ ++ LV+ K + + +SLS
Sbjct: 98 FPFYFHS--QPPSIHDVVHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLS 155
Query: 141 EDFKIYNVLPDAHTCSRLVASCV-----RARKFKIANTLLQVFITDGEIALLAFNSAM-- 193
+ ++ + PD T S L+ +C A F + +L++ I L +
Sbjct: 156 KQMEVKGIEPDLVTLSILI-NCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCL 214
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G K +++ ++K+ + G ++ Y ++ KIG++ L + R
Sbjct: 215 KGEVKKSLHF-----HDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDR--- 266
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
ST MY + D L K EA F+ +M +GI D Y++LIC F ++ A
Sbjct: 267 STRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGA 326
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L E K + D L+ +EG +++ +++ M +K + +++G
Sbjct: 327 FSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDG 386
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+ A +++ ++ P +Y +IN C+ +A + EM K
Sbjct: 387 YCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPN 446
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V Y+S++ K+GRI A+ L+ ++ +G +V Y SL+D + +NL + L+
Sbjct: 447 TVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFM 506
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
+M+ R + P+K +YT +I + K + + G ID +M+G K
Sbjct: 507 KMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEG 566
Query: 554 QIEELVKLLQDMKSEG 569
++E + + M+ G
Sbjct: 567 MLDEALAMKSKMEDNG 582
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/424 (19%), Positives = 173/424 (40%), Gaps = 19/424 (4%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD-------SGCYCQIMEAYYKIGDS 237
+++ F +G K+ + + I + ++M+ GI D C+C + + +
Sbjct: 131 SIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVL 190
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
K+ L + +T T + K LC G ++L F + +G + Y
Sbjct: 191 GKILKLGYQ------PNTIILTTLMKGLC----LKGEVKKSLHFHDKVVAQGFQMNQVSY 240
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
+L+ I E + A +L + E++ D + ++ ++ LV + D M N
Sbjct: 241 GTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEM-N 299
Query: 358 AKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
++ D I+ ++ GF A + ++ + P TY +I+A C+
Sbjct: 300 SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLK 359
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+A+ + M ++G VV YS+++ Y G + +A + M P+V YN ++
Sbjct: 360 EAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMI 419
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+ + K++ + L +EM + V P+ V+Y ++I ++ + E G
Sbjct: 420 NGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQP 479
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
D ++ K +++ + L MK G + ++ Y + ++ L AQ L
Sbjct: 480 ADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKL 539
Query: 597 QQNF 600
Q+
Sbjct: 540 FQHI 543
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 4/217 (1%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
E P + ++I L + K D ++L + NV+P+ T + L+ ++ + A
Sbjct: 407 EVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSA 466
Query: 172 NTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
L++ G+ A ++ + S + G K I ++ KMK GI + Y +++
Sbjct: 467 LDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDG 526
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K + LF + + + Y ++ L K G EAL M++ G
Sbjct: 527 LCKGARLKNAQKLF---QHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGC 583
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ D + +I S E AE+L E KG+L
Sbjct: 584 IPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLH 620
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 148/310 (47%), Gaps = 3/310 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ + MK + + Y +++ Y G + LF E K + ++ Y L
Sbjct: 75 ILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWT---YNALIQ 131
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
G+ G EAL+ + +M G +D Y I + ++ E L E + KG+
Sbjct: 132 GYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPP 191
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ +Y ++ K +++ M A + + +++ K + A +++
Sbjct: 192 DQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLF 251
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
E L S+G +P VTY+++++ Y R LY++A K++ EM + G C++AYS ++ YG
Sbjct: 252 ENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHH 311
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G ++A+ M+ G P+ IY +LMD +G+A R+ E L+ EM + PD ++Y
Sbjct: 312 GMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITY 371
Query: 508 TTVISAYNRA 517
++ A+ A
Sbjct: 372 GILVRAFANA 381
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 157/336 (46%), Gaps = 16/336 (4%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y L + L SGR A K DMK + + Y +LI +A+ ++ +LF+E
Sbjct: 55 LYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEM 114
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA-------IVNG 373
++KG + L+ Y +GL ++ L++ + M D + CA I
Sbjct: 115 KDKGESPNSWTYNALIQGYGRKGLFKEALELYDEM--------DGVGCAKDVHTYNIAIA 166
Query: 374 FSKRRGYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
+RG + ++ +++ ++G P QVTY ++++ Y + + + KA ++ EM + G+
Sbjct: 167 MYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRP 226
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+ Y+ M++ K + +A L +K+KG PN+ Y++++ ++GR + KLW
Sbjct: 227 NIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLW 286
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
EM P ++Y+ +I +Y + + + + R +G V D I ++ + K
Sbjct: 287 DEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKA 346
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ E L +M EG D Y + A +AG
Sbjct: 347 GRCREAELLYFEMTKEGFVPDGITYGILVRAFANAG 382
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 148/320 (46%), Gaps = 2/320 (0%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
AL+ MKE G D +Y L+ + ++ AE++ + + + + L+
Sbjct: 37 ALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIK 96
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
Y G ++ + + MK+ + A++ G+ ++ + A+++Y+++ GC
Sbjct: 97 EYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAK 156
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
TY I Y + L E++ EM KG V Y++++ +Y K A ++
Sbjct: 157 DVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEIL 216
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+M G PN+W YN ++ + +++ + +L++ ++ + V P+ V+Y+ ++S Y R
Sbjct: 217 REMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRH 276
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ K ++E + G I IA ++ + +E + QDM+ G D ++
Sbjct: 277 GLYTEAAKLWDEM-IEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKI 335
Query: 577 YHSAMNALRDAGLQMQAQWL 596
Y + M+A AG +A+ L
Sbjct: 336 YTALMDAYGKAGRCREAELL 355
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 154/346 (44%), Gaps = 3/346 (0%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
E MK +G D Y ++ G E + + K K+ + + Y L
Sbjct: 42 EVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVT---YTNLIKEY 98
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
+GR + K F++MK+KG + Y +LI + K A EL+ E + G +D
Sbjct: 99 ANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDV 158
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
+ MY + GL+E +++ M + +++ ++K+ + A ++ +
Sbjct: 159 HTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILRE 218
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ G P TY ++++ + ++A ++F ++ KG +V YS+M+++YG+ G
Sbjct: 219 MTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGL 278
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+A L +M GC P + Y+ L++ +G ++ +++M + + PD YT
Sbjct: 279 YTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTA 338
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
++ AY +A Y E G V D GI+V F+ ++
Sbjct: 339 LMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 147/373 (39%), Gaps = 39/373 (10%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P++ L+ LV S + ++ + +D K V + T + L+ + +
Sbjct: 50 KPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRK 109
Query: 174 LLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L Q GE +N+ + GY + ++ + +Y++M G D Y + Y
Sbjct: 110 LFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYG 169
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K G E + L E ++ P Y L D K +A + R+M E G
Sbjct: 170 KRGLLEDMERLLDEMDTK---GVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRP 226
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ Y ++ S V A +LF+ + KG++ + ++ +Y GL
Sbjct: 227 NIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGL-------- 278
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
Y A K+++++I GCIP + Y+ +I +Y
Sbjct: 279 ---------------------------YTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHH 311
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+Y +A F +M++ G Y++++ YGK GR R+A L +M +G P+ Y
Sbjct: 312 GMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITY 371
Query: 473 NSLMDMHGRAKNL 485
L+ A L
Sbjct: 372 GILVRAFANAGRL 384
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 112/233 (48%), Gaps = 1/233 (0%)
Query: 370 IVNGFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
I++G+ +++ A+++ E + G P ++ Y ++N AEK+ +M++
Sbjct: 23 IIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRD 82
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
+V Y++++ Y TGR++D L +MK KG PN W YN+L+ +GR ++
Sbjct: 83 KVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEA 142
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+L+ EM+ D +Y I+ Y + + + +E G D+ ++ V
Sbjct: 143 LELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDV 202
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
++K S + ++L++M G + + Y+ +++ R +A L +N +
Sbjct: 203 YAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLK 255
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/512 (20%), Positives = 224/512 (43%), Gaps = 9/512 (1%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VP+ + L G+ + +Q + AK+ P +I + +
Sbjct: 225 VPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKA 284
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
SL + V PD T + ++ + +AR A +L+ T+G + + +N + G
Sbjct: 285 CSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHG 344
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLD 253
Y L ++ KMKS G++ + + + K G S++ A +F + K K D
Sbjct: 345 YATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPD 404
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+ T ++ G + + F MK GI D ++ LI ++A V A
Sbjct: 405 IVSYCTLLH-----GYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDA 459
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+F E +++G+ D ++ + G + ++ M ++ + + +I+ G
Sbjct: 460 MLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQG 519
Query: 374 FSKRRGYWAAVKVYEQLISQGCI-PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
F G A ++ ++I++G P V + S+IN+ C+ A +F + G
Sbjct: 520 FCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERP 579
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
V+ ++S++ Y G++ A ++ M+ G E ++ Y++L+D + + + L+
Sbjct: 580 DVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLF 639
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+EM+R+ V P+ V+Y +++ RA K ++E +G + +I GI++G +
Sbjct: 640 REMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRN 699
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ +E + L Q + + K + ++ +NA+
Sbjct: 700 NCADEAIILFQKLGTMNVKFSITILNTMINAM 731
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/516 (20%), Positives = 216/516 (41%), Gaps = 8/516 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ +++ +HG K+ +T + ++ ++ +P+ T L+I L +++ D
Sbjct: 263 PNVVAYNTVIHGFFKEGETGKACSLFHEMTRQ--GVKPDVVTYNLIIDALCKARAMDKAE 320
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+ PD T + ++ + K A + + + G I ++ NS +
Sbjct: 321 LVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASL 380
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K +++ M + G D YC ++ Y G + LF KS + +
Sbjct: 381 CKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAA-- 438
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
++ IL + K G +A+ F +M+++G+ D Y+++I +F+ + + A E
Sbjct: 439 -DCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEK 497
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC-AIVNGFS 375
F + +G+ + V ++ + G + K ++V M N + D + +++N
Sbjct: 498 FNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLC 557
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A +++ + G P +T+ S+I+ YC + KA K+ M+ G + +V
Sbjct: 558 KDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIV 617
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
YS+++ Y K GRI D + L +M+ KG +PN Y ++ RA K + EM
Sbjct: 618 TYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM 677
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
T Y ++ R D + + + I M+ K+ +
Sbjct: 678 IESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRK 737
Query: 556 EELVKLLQDMKSEGTKLDERLYHSA-MNALRDAGLQ 590
EE +L + + G +E Y +N L+D ++
Sbjct: 738 EEAKELFATISASGLLPNESTYGVMIINLLKDGAVE 773
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 161/368 (43%), Gaps = 36/368 (9%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS---FASITEVKL 312
P + H Y IL D ++ R L F + G L+ I AS + +A+ TE +
Sbjct: 154 PLTVHTYSILMDCCCRARRPDLGLVLFGCILRTG-LKIHQITASTLLKCLCYANRTE-EA 211
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLV-----EKTLDVVESMKNAKLKISDC 365
L E G C+ V Y I +GL ++ LD+ + M S
Sbjct: 212 VNVLLHRMSELG-------CVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPN 264
Query: 366 ISC--AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+ +++GF K A ++ ++ QG P VTY II+A C+ KAE V
Sbjct: 265 VVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLR 324
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM---HG 480
+M G V Y+ M+ Y GR+++A + KMK++G PN+ I NS + HG
Sbjct: 325 QMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHG 384
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
R+K + +++ M + PD VSY T++ Y F + +N + NG D
Sbjct: 385 RSK---EAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCR 441
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL---------QM 591
+ I++ ++K +++ + + +M+ +G D Y + ++A G QM
Sbjct: 442 VFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQM 501
Query: 592 QAQWLQQN 599
A+ +Q N
Sbjct: 502 VARGIQPN 509
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 154/336 (45%), Gaps = 3/336 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAEELFKE 319
Y I+ L + + AL F+ M ++G P++ Y ++I F E A LF E
Sbjct: 231 YSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHE 290
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+G+ D ++ + ++K V+ M + +++G++
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGR 350
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A K++ ++ S+G IP V S + + C+ +A ++F M KG +V+Y +
Sbjct: 351 LKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCT 410
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ Y G D + L MK+ G + ++N L+ + + + ++ EM+++
Sbjct: 411 LLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQG 470
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
V+PD V+Y+TVISA++R ++ +N+ G + A+ ++ F + +
Sbjct: 471 VSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAK 530
Query: 560 KLLQDMKSEG-TKLDERLYHSAMNALRDAGLQMQAQ 594
+L+ +M ++G + D ++S +N+L G M A
Sbjct: 531 ELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAH 566
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 146/342 (42%), Gaps = 7/342 (2%)
Query: 258 STHMYKILCDSLGKSGRAFEALK-FFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
++ + K LC + R EA+ M E G + + Y+ ++ + + A +L
Sbjct: 195 ASTLLKCLC----YANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDL 250
Query: 317 FKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
F+ ++G P V ++ + +EG K + M +K I++
Sbjct: 251 FQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDAL 310
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K R A V Q+ + G P VTY +I+ Y + +A K+F +M+ +G +
Sbjct: 311 CKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNI 370
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V +S +A K GR ++A + M AKG +P++ Y +L+ + + L+
Sbjct: 371 VICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNS 430
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+ + D + +I AY + D + + E + G D ++ FS++ +
Sbjct: 431 MKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGR 490
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + ++ M + G + + +YHS + G ++A+ L
Sbjct: 491 LTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKEL 532
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/310 (18%), Positives = 130/310 (41%), Gaps = 6/310 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F+S ++ + KD + + A+D ++ + E RP+ T LI K D
Sbjct: 544 PDIVFFNSVINSLCKDGRVMD-AHDIFDLVTDIGE-RPDVITFTSLIDGYCLVGKMDKAF 601
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ + ++ V D T S L+ + + TL + G + + + + G
Sbjct: 602 KILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGL 661
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + + +M +G + Y I+ + +++ LF + + +
Sbjct: 662 FRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVK--- 718
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
FS + + +++ K R EA + F + G+L + S Y +I + V+ A +
Sbjct: 719 FSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNM 778
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F E+ G++ + +++ M +E+G + K + + + ++ + + +++ FS+
Sbjct: 779 FSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSR 838
Query: 377 RRGYWAAVKV 386
+ Y +K+
Sbjct: 839 KGKYHEDMKL 848
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 171/373 (45%), Gaps = 3/373 (0%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
++ G+ + ++ A G +E+ A+F E K L P T Y L K
Sbjct: 282 VQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGL--MP-RTRAYNALLKGYVK 338
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+G +A +M+ G D Y+ LI ++A+ + A + KE E G+ + V
Sbjct: 339 TGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYV 398
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
+++ Y + G +K+ V+ M+N+ + +++ F K A+ ++++
Sbjct: 399 FSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMR 458
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+G P VT+ ++I+ +C+ ++KAE++F MQ+ G C Y+ M+ +G+ R
Sbjct: 459 MEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWE 518
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
D L+ KM+++G NV Y +L+D++G++ + + + M+ + P Y +I
Sbjct: 519 DVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALI 578
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+AY + + + + R +G + ++ F + + E +LQ MK K
Sbjct: 579 NAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLK 638
Query: 572 LDERLYHSAMNAL 584
D Y + M AL
Sbjct: 639 PDVVTYTTLMKAL 651
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/410 (18%), Positives = 186/410 (45%), Gaps = 7/410 (1%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG--DSEKVAALF 244
L +N+ +G + + + +M+ G D Y I+++ + DS + ++
Sbjct: 185 LTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIY 244
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E +S K++ + + KSG A+ F ++ G+ + ++I +
Sbjct: 245 AEIESDKIE---LDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITAL 301
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ + AE +F+E +E G++ L+ Y++ G ++ +V M+ + +
Sbjct: 302 GNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDE 361
Query: 365 CISCAIVNGFSKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+++ ++ G W + + V +++ + G P ++ I+ +Y + K+ +V
Sbjct: 362 HTYSLLIDAYAN-AGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLR 420
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM+ G Y+ M+ +GK + A+ +M+ +G +P+ +N+L+D H ++
Sbjct: 421 EMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSG 480
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ + E+L++ M+ +P +Y +I+++ ++ + + G + +
Sbjct: 481 HHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYT 540
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+V ++ + + ++ ++ L+ MKS G K +Y++ +NA GL QA
Sbjct: 541 TLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQA 590
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 175/400 (43%), Gaps = 4/400 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ +TL +I L + + + ++ E+ K ++P + L+ V+ K A ++
Sbjct: 289 PKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESI 348
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ G ++ + Y + S +V ++M+++G+ +S + +I+ +Y
Sbjct: 349 VSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRD 408
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G +K + E ++ + H Y ++ D+ GK AL F M+ +G+ D
Sbjct: 409 RGKWQKSFQVLREMRNSGVSP---DRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPD 465
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ +LI AEELF+ +E G ++ + E+ E ++
Sbjct: 466 AVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLG 525
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M++ L + +V+ + + + A++ E + S G P Y ++INAY +
Sbjct: 526 KMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRG 585
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
L +A F M+ G V+ +S++ +G+ R +A ++ MK +P+V Y
Sbjct: 586 LSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYT 645
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+LM R + +V +++EM TPD+ + + SA
Sbjct: 646 TLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAMLRSA 685
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 154/342 (45%), Gaps = 15/342 (4%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y IL +LG+S + +EA + ++ L P Y +LI + A +++ A L
Sbjct: 156 LYSILIHALGRSEKLYEAFL----LSQRQTLT-PLTYNALIGACARNDDLEKALNLMSRM 210
Query: 321 EEKGMLRDPEVCLKLVLMYI------EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
G D V ++ + + +++K +ES K+++ + I+ GF
Sbjct: 211 RRDGFPSD-FVNYSFIIQSLTRTNKSDSSMLQKIYAEIES---DKIELDGQLLNDIIVGF 266
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+K A+ + G P T ++I A +AE +F E+++ G
Sbjct: 267 AKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRT 326
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
AY++++ Y KTG ++DA +V++M+ G P+ Y+ L+D + A + KE
Sbjct: 327 RAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKE 386
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
ME V P+ ++ ++++Y ++ + E R +G DR +M+ F K +
Sbjct: 387 MEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNC 446
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ + M+ EG + D +++ ++ +G +A+ L
Sbjct: 447 LDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEEL 488
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 157/354 (44%), Gaps = 6/354 (1%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P + +++ L G +K ++ A +E ++ F P++ T LLI + +W+S
Sbjct: 323 MPRTRAYNALLKGYVKTGSLKD-AESIVSEMER-SGFSPDEHTYSLLIDAYANAGRWESA 380
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAF-NSAMGG 195
+ ++ + V P+++ SR++AS K++ + +L+ G F N +
Sbjct: 381 RIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDT 440
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K + + +++M+ G+ D+ + +++ + K G K LF + +
Sbjct: 441 FGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQES--GCS 498
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P +T Y I+ +S G+ R + M+ +G+L + Y +L+ + K A E
Sbjct: 499 PCTT-TYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIE 557
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ + G+ + L+ Y + GL E+ ++ M+ LK S + +++N F
Sbjct: 558 CLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFG 617
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+ R A V + + P VTY +++ A R+ + K V+ EM G
Sbjct: 618 EDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSG 671
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 100/223 (44%), Gaps = 5/223 (2%)
Query: 385 KVYEQ-LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
K+YE L+SQ +TY ++I A R KA + M++ GF V YS ++
Sbjct: 169 KLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQS 228
Query: 444 YGKTGRIRDAMW--LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+T + +M + A++++ E + + N ++ ++ ++ + ++ ++
Sbjct: 229 LTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLS 288
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVK 560
P + VI+A A + + E + GG++ R A ++ + K +++
Sbjct: 289 PKTATLVAVITALGNAGRTEEAEAIFEELK-EGGLMPRTRAYNALLKGYVKTGSLKDAES 347
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
++ +M+ G DE Y ++A +AG A+ + + E +
Sbjct: 348 IVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEAS 390
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 192/406 (47%), Gaps = 23/406 (5%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGI---VLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+++ M GY + +LV+E+ K G+ V+ GC ++ Y K+G K +
Sbjct: 56 YHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGC---LINLYAKLGKVSKALEV-- 110
Query: 246 ECKSRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
S++++ +M Y +L + K A F D+ + GI D +Y ++I +
Sbjct: 111 ---SKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITA 167
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
F + ++ A KE +++ + ++ + +G ++K LDV + M+ +S
Sbjct: 168 FCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMR-----MS 222
Query: 364 DCISC-----AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
CI A++ G ++R A ++ +++ G P + TY +I++ Y + KA
Sbjct: 223 GCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKA 282
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
F +++ +G V Y +++ K+GR++ A+ + +M A+ N +IYN L+D
Sbjct: 283 FAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDG 342
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
R ++ + L ++M+R V PD +YT+ I+A ++A + K E + G +
Sbjct: 343 WARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPN 402
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ +++ S E+ + ++MK G K D +YH M +L
Sbjct: 403 VKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSL 448
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 158/354 (44%), Gaps = 39/354 (11%)
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK-- 334
+A R+M+E+GI IY +++ + + + +F+ +E G+ +P V
Sbjct: 36 KAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGL--NPSVITYGC 93
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
L+ +Y + G V K L+V + M++A +K + ++NGF K + + A ++E LI G
Sbjct: 94 LINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDG 153
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
P V Y +II A+C + +A EMQ++ + ++ + + G ++ A+
Sbjct: 154 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKAL 213
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ M+ GC P V YN+L+ + + + E++ EM V+P++ +YTT++ Y
Sbjct: 214 DVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGY 273
Query: 515 NRAREFDMCVKFYNEFRMNG------------------GVIDRAIA-------------- 542
+ ++ + R G G + A+A
Sbjct: 274 ASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNT 333
Query: 543 ---GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
I++ +++ + E L+Q MK EG + D Y S +NA AG +A
Sbjct: 334 FIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRA 387
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/388 (18%), Positives = 162/388 (41%), Gaps = 8/388 (2%)
Query: 90 MLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVL 149
M+ D L ++ + E P T LI + K + +S++ + +
Sbjct: 65 MVGDEDKCLLVFERFKECG----LNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIK 120
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
+ T S L+ ++ + + A + + I DG + ++ +N+ + + + +
Sbjct: 121 HNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCT 180
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
++M+ + + I+ + + G+ +K +F ++ + H Y L
Sbjct: 181 VKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVF---DMMRMSGCIPTVHTYNALILG 237
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L + + +A + +M G+ + Y +++ +AS+ + A F + ++G+ D
Sbjct: 238 LVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLD 297
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ + G ++ L V + M + + I +++G+++R W A + +
Sbjct: 298 VYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQ 357
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
Q+ +G P TY S INA + +A K EM+ G V Y++++ + +
Sbjct: 358 QMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARAS 417
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
A+ +MK G +P+ +Y+ LM
Sbjct: 418 LPEKALSCFEEMKLSGLKPDRAVYHCLM 445
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/171 (18%), Positives = 76/171 (44%)
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A+ F E ++K + Y +++ Y + + A LV +M+ +G + + IY+++MD
Sbjct: 2 ADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMD 61
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ + + +++ + + P ++Y +I+ Y + + ++ E G
Sbjct: 62 GYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKH 121
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ +++ F KL + +D+ +G K D LY++ + A G
Sbjct: 122 NMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMG 172
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 148/310 (47%), Gaps = 3/310 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ + MK + + Y +++ Y G + LF E K + ++ Y L
Sbjct: 75 ILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWT---YNALIQ 131
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
G+ G EAL+ + +M G +D Y I + ++ E L E + KG+
Sbjct: 132 GYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPP 191
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ +Y ++ K +++ M A + + +++ K + A +++
Sbjct: 192 DQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLF 251
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
E L S+G +P VTY+++++ Y R LY++A K++ EM + G C++AYS ++ YG
Sbjct: 252 ENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHH 311
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G ++A+ M+ G P+ IY +LMD +G+A R+ E L+ EM + PD ++Y
Sbjct: 312 GMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITY 371
Query: 508 TTVISAYNRA 517
++ A+ A
Sbjct: 372 GILVRAFANA 381
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 158/336 (47%), Gaps = 16/336 (4%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y L + L SGR A K DMK+ + + Y +LI +A+ ++ +LF+E
Sbjct: 55 LYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEM 114
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA-------IVNG 373
++KG + L+ Y +GL ++ L++ + M D + CA I
Sbjct: 115 KDKGESPNSWTYNALIQGYGRKGLFKEALELYDEM--------DGVGCAKDVHTYNIAIA 166
Query: 374 FSKRRGYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
+RG + ++ +++ ++G P QVTY ++++ Y + + + KA ++ EM + G+
Sbjct: 167 MYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRP 226
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+ Y+ M++ K + +A L +K+KG PN+ Y++++ ++GR + KLW
Sbjct: 227 NIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLW 286
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
EM P ++Y+ +I +Y + + + + R +G V D I ++ + K
Sbjct: 287 DEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKA 346
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ E L +M EG D Y + A +AG
Sbjct: 347 GRCREAELLYFEMTKEGFVPDGITYGILVRAFANAG 382
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 149/320 (46%), Gaps = 2/320 (0%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
AL+ MKE G D +Y L+ + ++ AE++ + ++ + + L+
Sbjct: 37 ALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIK 96
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
Y G ++ + + MK+ + A++ G+ ++ + A+++Y+++ GC
Sbjct: 97 EYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAK 156
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
TY I Y + L E++ EM KG V Y++++ +Y K A ++
Sbjct: 157 DVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEIL 216
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+M G PN+W YN ++ + +++ + +L++ ++ + V P+ V+Y+ ++S Y R
Sbjct: 217 REMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRH 276
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ K ++E + G I IA ++ + +E + QDM+ G D ++
Sbjct: 277 GLYTEAAKLWDEM-IEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKI 335
Query: 577 YHSAMNALRDAGLQMQAQWL 596
Y + M+A AG +A+ L
Sbjct: 336 YTALMDAYGKAGRCREAELL 355
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 154/346 (44%), Gaps = 3/346 (0%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
E MK +G D Y ++ G E + + K K+ + + Y L
Sbjct: 42 EVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVT---YTNLIKEY 98
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
+GR + K F++MK+KG + Y +LI + K A EL+ E + G +D
Sbjct: 99 ANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDV 158
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
+ MY + GL+E +++ M + +++ ++K+ + A ++ +
Sbjct: 159 HTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILRE 218
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ G P TY ++++ + ++A ++F ++ KG +V YS+M+++YG+ G
Sbjct: 219 MTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGL 278
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+A L +M GC P + Y+ L++ +G ++ +++M + + PD YT
Sbjct: 279 YTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTA 338
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
++ AY +A Y E G V D GI+V F+ ++
Sbjct: 339 LMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 148/373 (39%), Gaps = 39/373 (10%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P++ L+ LV S + ++ + +D K V + T + L+ A + +
Sbjct: 50 KPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRK 109
Query: 174 LLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L Q GE +N+ + GY + ++ + +Y++M G D Y + Y
Sbjct: 110 LFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYG 169
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K G E + L E ++ P Y L D K +A + R+M E G
Sbjct: 170 KRGLLEDMERLLDEMDTK---GVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRP 226
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ Y ++ S V A +LF+ + KG++ + ++ +Y GL
Sbjct: 227 NIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGL-------- 278
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
Y A K+++++I GCIP + Y+ +I +Y
Sbjct: 279 ---------------------------YTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHH 311
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+Y +A F +M++ G Y++++ YGK GR R+A L +M +G P+ Y
Sbjct: 312 GMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITY 371
Query: 473 NSLMDMHGRAKNL 485
L+ A L
Sbjct: 372 GILVRAFANAGRL 384
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 111/233 (47%), Gaps = 1/233 (0%)
Query: 370 IVNGFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
I++G+ +++ A+++ E + G P ++ Y ++N AEK+ +M+Q
Sbjct: 23 IIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQD 82
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
+V Y++++ Y GR++D L +MK KG PN W YN+L+ +GR ++
Sbjct: 83 KVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEA 142
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+L+ EM+ D +Y I+ Y + + + +E G D+ ++ V
Sbjct: 143 LELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDV 202
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
++K S + ++L++M G + + Y+ +++ R +A L +N +
Sbjct: 203 YAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLK 255
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/517 (22%), Positives = 217/517 (41%), Gaps = 39/517 (7%)
Query: 85 SFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFK 144
SF+ G D A + Y+ A + + P+ L+ L+Q KK + + E+
Sbjct: 138 SFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMV 197
Query: 145 IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAF-NSAMGGYNKLHMYY 203
+ D ++ +V + RK + L+ G I + F N+ + GY K
Sbjct: 198 KRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVE 257
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYK 263
+++++K G + + Y ++ K + + V L +E K R +D + +Y
Sbjct: 258 RANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVD---VNVQVYN 314
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
+ D+ K G E K R + E G D + Y +LI +V AEEL + A ++
Sbjct: 315 SIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKR 374
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G+ + L+ +Y ++G + D+ M + A+V+G A
Sbjct: 375 GLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVA 434
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ---------------- 427
+ V ++++ +G +P Y ++N C+ S A+ + +EM
Sbjct: 435 LTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDG 494
Query: 428 -------------------KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
KG D VV Y++M+ Y K G + DA+ V +MK P+
Sbjct: 495 FIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPD 554
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ Y++++D + + +L KL+ +M ++K P+ V+YT++I+ + R + K +
Sbjct: 555 EFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFE 614
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
E R +G + I++G F K +I + + M
Sbjct: 615 EMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELM 651
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 151/339 (44%), Gaps = 10/339 (2%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
PD T + L++ R K A LL+ I G L++ + Y K +
Sbjct: 343 PDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDL 402
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+ M G LD Y ++ G+ + AL + K + P ++Y +L +
Sbjct: 403 FIGMTEKGHPLDLVAYGALVHGLVAAGEVD--VALTVRDKMVERGVLP-DANVYNVLMNG 459
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L K GR A +M + + D + A+L+ F ++ A++LF+ KGM D
Sbjct: 460 LCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGM--D 517
Query: 329 PEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
P V ++ Y + G++ L V+ MK+ + I++G+ K+ A+K+
Sbjct: 518 PGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKL 577
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ Q++ Q C P VTY S+IN +CR S+AEK F EM+ G VV Y+ ++ + K
Sbjct: 578 FGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCK 637
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
G+I A M C PN +N L++ G NL
Sbjct: 638 EGKISKACSFFELMLLNRCIPNDVTFNYLIN--GLTNNL 674
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 164/398 (41%), Gaps = 6/398 (1%)
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L ++ K+ LP T ++ + FK + LL G ++ + +NS +
Sbjct: 261 GLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQ 320
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K + G D Y ++ + G + L R L
Sbjct: 321 IKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNK 380
Query: 257 FS-THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
S T + + C K G+ A F M EKG D Y +L+ + EV +A
Sbjct: 381 LSYTPLIHVYC----KQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALT 436
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ + E+G+L D V L+ ++G + ++ M + L + +S +V+GF
Sbjct: 437 VRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFI 496
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ A K++E I++G PG V Y ++I YC+ + + A M+
Sbjct: 497 RHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEF 556
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
YS+++ Y K + +A+ L +M + C+PNV Y SL++ R + + EK ++EM
Sbjct: 557 TYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEM 616
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+ P+ V+YT +I + + + F+ +N
Sbjct: 617 RSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLN 654
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 146/413 (35%), Gaps = 116/413 (28%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
I+ L K + E K D KG + + Y +L+ + +V+ A LFKE + K
Sbjct: 210 IMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMK 269
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR------ 377
G L E G+ ++NG K+
Sbjct: 270 GFLPTTET----------YGI-------------------------MINGLCKKCNFKAV 294
Query: 378 ---------RGYWAAVKVYEQLIS--------------------QGCIPGQVTYASIINA 408
RG V+VY ++ GC P TY ++I+
Sbjct: 295 DGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISG 354
Query: 409 YCR-----------------------------IALYSKAEK------VFIEMQQKGFDKC 433
CR I +Y K K +FI M +KG
Sbjct: 355 SCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLD 414
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+VAY ++V G + A+ + KM +G P+ +YN LM+ + L + L
Sbjct: 415 LVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLV 474
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG--IMVGVFSK 551
EM + ++ D T++ + R + D K + E + G +D + G M+ + K
Sbjct: 475 EMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLF-ELTIAKG-MDPGVVGYNAMIKGYCK 532
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAM------NALRDAGLQMQAQWLQQ 598
+ + + +Q MK DE Y + + N L +A L++ Q ++Q
Sbjct: 533 FGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNA-LKLFGQMVKQ 584
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 137/389 (35%), Gaps = 95/389 (24%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ + +L+ L + + + L + N+ DA + LV +R K A L
Sbjct: 448 PDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKL 507
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
++ I G + ++ +N+ + GY K M + ++MK D Y I++ Y K
Sbjct: 508 FELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVK 567
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
D ALK F M ++ +
Sbjct: 568 QND--------------------------------------LHNALKLFGQMVKQKCKPN 589
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDV 351
Y SLI F + AE+ F+E G+ P V +L+ + +EG + K
Sbjct: 590 VVTYTSLINGFCRTGDSSRAEKTFEEMRSSGL--KPNVVTYTILIGCFCKEGKISK---- 643
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
A +E ++ CIP VT+ +IN
Sbjct: 644 -------------------------------ACSFFELMLLNRCIPNDVTFNYLINGLTN 672
Query: 412 ---IALYSKAEK-----------VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
A+ +KA + F M G+++ V AY+S++ + A+ L
Sbjct: 673 NLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLR 732
Query: 458 AKMKAKGCEPNVWIYNSL---MDMHGRAK 483
KM KG P+ + +L + + GR+K
Sbjct: 733 DKMTGKGIFPDPVSFAALVYGLCLEGRSK 761
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 111/246 (45%), Gaps = 14/246 (5%)
Query: 364 DCISCA-IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
D SC+ ++ ++ R + + E + + P + + ++ AY L ++A +++
Sbjct: 98 DGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELY 157
Query: 423 -IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM-KAKGCEPNVWIYNSLMDMHG 480
I + V+A ++++ + ++ A + +M K GC N Y+ + + G
Sbjct: 158 HIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDN---YSVCIMVRG 214
Query: 481 RAKNLRQVE---KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
K R+VE KL + + P+ V Y T++ Y + + + + E +M G +
Sbjct: 215 LCKE-RKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLP 273
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA---- 593
GIM+ K + + LL +MK G ++ ++Y+S ++A G +++
Sbjct: 274 TTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTL 333
Query: 594 QWLQQN 599
+W+ +N
Sbjct: 334 RWITEN 339
>gi|255557939|ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540762|gb|EEF42322.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 186/403 (46%), Gaps = 24/403 (5%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P + LI L+ + +L ++ + + P + ++ ++ ++A
Sbjct: 52 FHPSSLSYTCLIETLLSVGRTLEAEALYQEMMCFGLKPRLKLYNIMLRGFLKKGLLRVAE 111
Query: 173 TLLQVFITDG--------EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
+L++ G EI LL +N G +L +S I +MK G L+S Y
Sbjct: 112 RVLRILDDLGLHRNQETYEI-LLDYNVNAG---RLEDTWSVI---NEMKQKGFQLNSFVY 164
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
+++ Y G +K + E + + P H+Y + D+ GK G EAL+ +
Sbjct: 165 SKVIGLYRDNGMWKKAIGIIEEIREMGM---PLDKHIYNSIIDTFGKYGELDEALEVLSN 221
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG- 343
M+++GI D + SLI + A ELF + + +G+ DP++ + ++ E+G
Sbjct: 222 MQQQGITPDIVTWNSLIRWHCKAGNLSKALELFSKMQAQGLYPDPKILVTIISRLAEQGK 281
Query: 344 --LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
++ + D+ MK+ K S I +V+ + + + A + L S+G +P
Sbjct: 282 WNIIRENFDI---MKSWGYKKSGAIYAILVDIYGQYGRFQDAEECISALKSEGILPSASM 338
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ + NAY + L + KV M+ +G + ++ + ++ +G GR R+A+ + MK
Sbjct: 339 FCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLNVLINAFGIAGRHREALSIYHHMK 398
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
G P+V Y++LM + RA+ +V +++ EME TPDK
Sbjct: 399 ESGISPDVVTYSTLMKAYIRARKFDEVPEIYSEMESSGCTPDK 441
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 179/430 (41%), Gaps = 73/430 (16%)
Query: 180 TDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
T E++ ++NS + K+ + + M+S G S Y ++E +G + +
Sbjct: 15 TGQELSGESYNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLE 74
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
AL+ E L +Y I+ K G A + R + + G+ + Y
Sbjct: 75 AEALYQEMMCFGLKP---RLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEI 131
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
L+ + ++ + E ++KG + V K++ +Y + G+ +K + ++E ++
Sbjct: 132 LLDYNVNAGRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMG 191
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+ + I +I++ F K A++V + QG P VT+ S+I +C+ SKA
Sbjct: 192 MPLDKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKAL 251
Query: 420 KVFIEMQQKG---------------------------FD--------KCVVAYSSMVAMY 444
++F +MQ +G FD K Y+ +V +Y
Sbjct: 252 ELFSKMQAQGLYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIY 311
Query: 445 GKTGRIRDAMWLVAKMK-----------------------------------AKGCEPNV 469
G+ GR +DA ++ +K A+G EPN+
Sbjct: 312 GQYGRFQDAEECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNL 371
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
+ N L++ G A R+ ++ M+ ++PD V+Y+T++ AY RAR+FD + Y+E
Sbjct: 372 IMLNVLINAFGIAGRHREALSIYHHMKESGISPDVVTYSTLMKAYIRARKFDEVPEIYSE 431
Query: 530 FRMNGGVIDR 539
+G D+
Sbjct: 432 MESSGCTPDK 441
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 169/365 (46%), Gaps = 11/365 (3%)
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K+GD +K L + +S + S Y L ++L GR EA +++M G+
Sbjct: 33 KVGDVDKAMTLLADMQSLGFHPSSLS---YTCLIETLLSVGRTLEAEALYQEMMCFGLKP 89
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+Y ++ F +++AE + + ++ G+ R+ E L+ + G +E T V+
Sbjct: 90 RLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILLDYNVNAGRLEDTWSVI 149
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYEQLISQGCIPGQVTYASIINAYCR 411
MK +++ + ++ G + G W A+ + E++ G + Y SII+ + +
Sbjct: 150 NEMKQKGFQLNSFVYSKVI-GLYRDNGMWKKAIGIIEEIREMGMPLDKHIYNSIIDTFGK 208
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+A +V MQQ+G +V ++S++ + K G + A+ L +KM+A+G P+ I
Sbjct: 209 YGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFSKMQAQGLYPDPKI 268
Query: 472 YNSLMDM---HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+++ G+ +R+ + K +K + Y R ++ + C+ +
Sbjct: 269 LVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYGRFQDAEECI---S 325
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ G + ++ ++ +++ E+ VK+LQ M++EG + + + + +NA AG
Sbjct: 326 ALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLNVLINAFGIAG 385
Query: 589 LQMQA 593
+A
Sbjct: 386 RHREA 390
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/188 (18%), Positives = 87/188 (46%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
+Y S I C++ KA + +MQ GF ++Y+ ++ GR +A L +M
Sbjct: 23 SYNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLEAEALYQEM 82
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
G +P + +YN ++ + LR E++ + ++ + ++ +Y ++ A
Sbjct: 83 MCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILLDYNVNAGRL 142
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ NE + G ++ + ++G++ ++ + ++++++ G LD+ +Y+S
Sbjct: 143 EDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPLDKHIYNSI 202
Query: 581 MNALRDAG 588
++ G
Sbjct: 203 IDTFGKYG 210
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/490 (20%), Positives = 213/490 (43%), Gaps = 4/490 (0%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A D + ++ +P + L+ L++S KWD S F+ + P+ T + L+
Sbjct: 97 ALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILI 156
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
R ++F A LL G + ++ + + K + ++++M G+
Sbjct: 157 KISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVT 216
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
D CY +++ ++K GD + ++ + K S + Y ++ + L K G+ E+
Sbjct: 217 PDVACYNILIDGFFKKGDILNASEIWE--RLLKGPSVYPNIPSYNVMINGLCKCGKFDES 274
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+ + MK+ +D Y++LI + A ++KE E G+ D V ++
Sbjct: 275 FEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNG 334
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
Y+ G +E+ L++ + M+ + + ++ G + A+ ++E L + C
Sbjct: 335 YLRAGRIEECLELWKVMEKEGCRTVVSYN-ILIRGLFENAKVDEAISIWELLPEKDCCAD 393
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+TY +++ C+ +KA + E + D AYSSM+ + GR+ + ++
Sbjct: 394 SMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLD 453
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M GC+PN + N++++ RA L + + M + P V+Y T+I+ ++A
Sbjct: 454 QMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 513
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
F E G + +++ + +++ + L +G K D ++++
Sbjct: 514 RFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 573
Query: 579 SAMNALRDAG 588
++ L +G
Sbjct: 574 IIIHGLCSSG 583
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 169/381 (44%), Gaps = 4/381 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY++M G+ D Y ++ Y + G E+ L+ + ++ T S Y IL
Sbjct: 312 VYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW-KVMEKEGCRTVVS---YNILIR 367
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L ++ + EA+ + + EK D Y L+ + A + +EAE
Sbjct: 368 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 427
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D ++ EG +++ V++ M K + + A++NGF + A++ +
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
++S+GC P VTY ++IN + +S+A + EM KG+ ++ YS ++ +
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
++ A+ L + KG +P+V ++N ++ + + +L+ EM++RK P+ V++
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T++ + + R+F+ K ++ G D I + +I + V L D
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVD 667
Query: 568 EGTKLDERLYHSAMNALRDAG 588
G ++ + A+ D G
Sbjct: 668 RGVLPTAITWNILVRAVLDNG 688
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 145/339 (42%), Gaps = 3/339 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L ++L +S + EA FF + G+ + Y LI + A+EL
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 176
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E+G D L+ + G + L + + M + +++GF K+
Sbjct: 177 EQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDIL 236
Query: 382 AAVKVYEQLISQGCI-PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A +++E+L+ + P +Y +IN C+ + ++ +++ M++ + + YS++
Sbjct: 237 NASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTL 296
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ +G + A + +M G P+V +YN++++ + RA + + +LWK ME+
Sbjct: 297 IHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC 356
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
VSY +I + D + + D G++V K + + +
Sbjct: 357 R-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALS 415
Query: 561 LLQDMKSEGTKLDERLYHSAMNAL-RDAGLQMQAQWLQQ 598
+L++ ++ LD Y S +N L R+ L A L Q
Sbjct: 416 ILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQ 454
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 113/267 (42%), Gaps = 2/267 (0%)
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G P V ++ + LV +VE ++ K K + ++ ++ ++K A
Sbjct: 38 GYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQA 97
Query: 384 VKVYEQLISQ-GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
+ +++++ GC PG +Y S++NA + +AE F+ + G + Y+ ++
Sbjct: 98 LDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIK 157
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ + + A L+ M +G P+V+ Y +L++ + + KL+ EM R VTP
Sbjct: 158 ISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTP 217
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKL 561
D Y +I + + + + + V + +M+ K + +E ++
Sbjct: 218 DVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEI 277
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAG 588
MK D Y + ++ L +G
Sbjct: 278 WHRMKKNERGQDLYTYSTLIHGLCGSG 304
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/511 (21%), Positives = 226/511 (44%), Gaps = 14/511 (2%)
Query: 77 VPDAKKFDSFLHGMLKDP-----QTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSK 131
V DA +++ L + + Q + L D EA P RP + ++R L S+
Sbjct: 80 VRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAH--PAARPNAVSYTTVMRGLCASR 137
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFN 190
+ V+L + V D T L+ A + A LL G + ++ ++
Sbjct: 138 RTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYS 197
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ GY + + V+E M GI D + +++ K G + K A + R
Sbjct: 198 CLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQR 257
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
L+ + Y +L +SL K G EAL ++M +KG+ D Y +LI + + E+
Sbjct: 258 GLEPNVVT---YNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEM 314
Query: 311 KLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
A +E + + +P+V ++ + G + + + V E M +
Sbjct: 315 DEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYN 374
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++ GF + A+ + ++L G P TY+ +IN + ++ +AEK M+Q+
Sbjct: 375 YLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQR 434
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G + Y ++A + G + AM L +M K C + Y++++ ++ +++ V
Sbjct: 435 GIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD-KNCGLDAIAYSTMIHGACKSGDMKTV 493
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
++L ++M + PD V+Y+ +I+ Y + + + + + +G V D A+ ++
Sbjct: 494 KQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKG 553
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+S Q ++++KL+ +M+++ D ++ +
Sbjct: 554 YSAEGQTDKVLKLIHEMRAKNVAFDPKIIST 584
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 146/339 (43%), Gaps = 6/339 (1%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y + L S R EA+ R M+ G+ D Y +LI +E+ A EL E
Sbjct: 126 YTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMC 185
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
G+ + V L+ Y G + V E M +K + +++ K
Sbjct: 186 GSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTG 245
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A KV + ++ +G P VTY +IN+ C+ +A + EM KG VV Y++++
Sbjct: 246 KAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLI 305
Query: 442 AMYGKTGRIRDAMWLVAKMKAKG--CEPNVWIYNSLMDMHGRAK--NLRQVEKLWKEMER 497
A + +AM + +M EP+V +NS+ +HG K + Q K+ + M
Sbjct: 306 AGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSV--IHGLCKIGRMTQAVKVREMMAE 363
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
R + V+Y +I + R + M + +E ++G D I++ FSK+ +++
Sbjct: 364 RGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDR 423
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
K L M+ G K + Y + A+ G+ +A L
Sbjct: 424 AEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGL 462
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 83/188 (44%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P V+Y +++ C +A + MQ G VV Y +++ + A+ L
Sbjct: 121 PNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALEL 180
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ +M G +PNV +Y+ L+ + R+ + V K++++M RR + PD + +T +I +
Sbjct: 181 LDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCK 240
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ K + G + +++ K + E + L ++M +G D
Sbjct: 241 EGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVT 300
Query: 577 YHSAMNAL 584
Y++ + L
Sbjct: 301 YNTLIAGL 308
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 85/192 (44%), Gaps = 8/192 (4%)
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG--RIRDAMW 455
G+ A+++N R A ++A + + + V+Y++++A + G +R A
Sbjct: 50 GRADAAALLNRRLRGAPVTEACSLLSALPDV---RDAVSYNTVLAALCRRGGDHLRQARS 106
Query: 456 LVAKMKAKG---CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
L+ M + PN Y ++M ++ + L + M+ V D V+Y T+I
Sbjct: 107 LLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIR 166
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
A E D ++ +E +G + + ++ + + + +++ K+ +DM G K
Sbjct: 167 GLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKP 226
Query: 573 DERLYHSAMNAL 584
D ++ ++ L
Sbjct: 227 DVIMFTGLIDDL 238
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 199/437 (45%), Gaps = 8/437 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P +++ L K + QE A + +K+ P T +L+ L S + +
Sbjct: 188 PTVVTYNTMLDSFCKQGKVQE-ALQLLLQMQKMGCL-PNDVTYNVLVNGLSHSGELEQAK 245
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGY 196
L ++ + A+T L+ + A+ L + ++ G + L+ +N+ M G
Sbjct: 246 ELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGL 305
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K + + M + ++ D Y ++ Y ++G+ + LF E + R L P
Sbjct: 306 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGL--VP 363
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
S Y L D L + G A++ +M + G D + L+ F + + +A+EL
Sbjct: 364 -SVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKEL 422
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNGFS 375
F E +G+ D + ++ ++ G K + E M A+ D I+ + ++G
Sbjct: 423 FDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEML-ARGFPPDLITYNVFIDGLH 481
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A ++ ++++ G +P VTY SII+A+ KA VF+EM KG VV
Sbjct: 482 KLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVV 541
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+ ++ Y GR++ A+ +M KG PNV YN+L++ + + + Q K + EM
Sbjct: 542 TYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEM 601
Query: 496 ERRKVTPDKVSYTTVIS 512
+ + ++P+K +YT +I+
Sbjct: 602 QAKGISPNKYTYTILIN 618
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 173/397 (43%), Gaps = 10/397 (2%)
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY----KIGDSEKVAALFLECKSRK 251
Y K M +LV+ KM S G++ D +++ I + +V + +EC R
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRP 188
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
T Y + DS K G+ EAL+ M++ G L + Y L+ + E++
Sbjct: 189 TVVT------YNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELE 242
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A+EL +E G+ L+ Y E+G +++ + E M + + I+
Sbjct: 243 QAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIM 302
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
G K A K+ + ++++ +P V+Y ++I Y R+ +A +F E++ +G
Sbjct: 303 YGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLV 362
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
VV Y++++ + G + AM L +M G +P+V+ + L+ + NL ++L
Sbjct: 363 PSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKEL 422
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+ EM R + PD+ +Y T I + + E G D + + K
Sbjct: 423 FDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHK 482
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
L ++E +L++ M G D Y S ++A AG
Sbjct: 483 LGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAG 519
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 171/380 (45%), Gaps = 17/380 (4%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST--PFSTHMYKILCD 267
++M G+ + + Y ++ Y + G ++ + L E SR T ++T MY
Sbjct: 249 QEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMY----- 303
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L K GR +A K M K ++ D Y +LI + + + A LF E +G++
Sbjct: 304 GLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLV- 362
Query: 328 DPEVCLKLVLMYIEEGLVE-KTLDVVESMKNAKLKIS---DCISCAI-VNGFSKRRGYWA 382
P V L+ +GL LDV +K+ +K D + I V GF K
Sbjct: 363 -PSVVTYNTLI---DGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPM 418
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A +++++++++G P + Y + I ++ SKA + EM +GF ++ Y+ +
Sbjct: 419 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 478
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
K G +++A LV KM G P+ Y S++ H A +LR+ ++ EM + + P
Sbjct: 479 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFP 538
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
V+YT +I +Y + + + E G + ++ K+ ++++ K
Sbjct: 539 SVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFF 598
Query: 563 QDMKSEGTKLDERLYHSAMN 582
+M+++G ++ Y +N
Sbjct: 599 TEMQAKGISPNKYTYTILIN 618
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/508 (22%), Positives = 212/508 (41%), Gaps = 55/508 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDY-YNEAKKLPEF--RPEKSTLKLLIRYLVQSKKWD 134
P + F+S +H + Y Y Y KK+ + +P +LI + ++K
Sbjct: 367 PSRRIFNSLIHAYCRSGD-----YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP 421
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMG 194
S+ L K Y + DAH V K ++N +
Sbjct: 422 SLDVLELAEKAYGEMLDAH---------VVLNKVNVSN----------------LARCLC 456
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
G K YS I +M S G + D+ Y +++ + LF E KS +
Sbjct: 457 GAGKFEKAYSII---REMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP 513
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
F+ Y IL DS K G +A K+F +M G + Y +LI ++ ++ A
Sbjct: 514 DVFT---YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK-NAKL-------KISDC- 365
ELF+ +G + + L+ + + G +EK + M+ NA + KI D
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630
Query: 366 -------ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
A+V+G K A + + + +GC P + Y ++I+ +C++ +A
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+ VF +M ++G+ V YSS++ K R+ A+ ++++M C PNV IY ++D
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDG 750
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ + +L ME + P+ V+YT +I + +A + D C++ + G +
Sbjct: 751 LCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN 810
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+++ +++ +LL +MK
Sbjct: 811 FVTYRVLINHCCAAGLLDDAHQLLDEMK 838
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 110/526 (20%), Positives = 227/526 (43%), Gaps = 45/526 (8%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
EF+ + +I L ++ ++ + + + +P+ T L+ C+R R+
Sbjct: 294 EFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRC 353
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+L + IT+G + FNS + Y + Y + +KM G CQ
Sbjct: 354 KRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG--------CQPGYV 405
Query: 231 YYKI-----GDSEKVAALFLECKSRKLDSTPFSTH--MYKILCDSLGK----SGRAFEAL 279
Y I +EK+ +L + + K H + K+ +L + +G+ +A
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
R+M KG + D S Y+ +I + ++V A LF+E + ++ D L+ +
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ GL+++ + M + A+++ + K R +A +++E ++S+GCIP
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKG----------------FDKCVVAYSSMVAM 443
VTY ++I+ +C+ KA +++ M+ D + Y ++V
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG 645
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K ++++A L+ M +GCEPN +Y++L+D + L + + ++ +M R P+
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+Y+++I + + D+ +K + N + I M+ K+ + +E +L+
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765
Query: 564 DMKSEGTKLDERLYHSAMNALRDAG---------LQMQAQWLQQNF 600
M+ +G + Y + ++ AG QM A+ NF
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNF 811
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 93/495 (18%), Positives = 201/495 (40%), Gaps = 44/495 (8%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
++P + T L+R +++ + D+ + + D +T V +A +++ A
Sbjct: 228 YKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREAL 287
Query: 173 TLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY----CQIM 228
L++ + ++ + + + G + ++ + +M+S+ + + Y C +
Sbjct: 288 ALIEK--EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCL 345
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
++G +++ ++ + + S ++ L + +SG A K + M +
Sbjct: 346 RK-RQLGRCKRILSMMIT------EGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398
Query: 289 GILEDPSIYASL---ICS---FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
G +Y L IC S+ ++LAE+ + E + ++ + L
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
G EK ++ M + ++ A ++E++ S +P TY
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+I+++C++ L +A K F EM + G VV Y++++ Y K ++ A L M +
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
+GC PNV Y +L+D H ++ + + +++ M PD Y
Sbjct: 579 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY--------------- 623
Query: 523 CVKFYNEFRMNGGVI-DRAI--AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
F+++ G I D I G +V K +++E LL M EG + + +Y +
Sbjct: 624 -------FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDA 676
Query: 580 AMNALRDAGLQMQAQ 594
++ G +AQ
Sbjct: 677 LIDGFCKVGKLDEAQ 691
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 136/333 (40%), Gaps = 17/333 (5%)
Query: 275 AFEALKFFRDMKEKGILEDPS--IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
A E L +D+ K PS Y +L+ F + A + +E + G D
Sbjct: 216 ALEELGRLKDLGYK-----PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTL 270
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
V + + G + L ++E + K+ I +++G + + A+ ++ S
Sbjct: 271 GCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRS 327
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
CIP VTY ++ R + +++ M +G ++S++ Y ++G
Sbjct: 328 SSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSY 387
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLM-DMHGRAK-----NLRQVEKLWKEMERRKVTPDKVS 506
A L+ KM GC+P +YN L+ + G K L EK + EM V +KV+
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN 447
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+ + A +F+ E G + D + ++G+ S+++ L ++MK
Sbjct: 448 VSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQ-WLQQ 598
S D Y +++ GL QA+ W +
Sbjct: 508 SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILE--DPSIYASLICSFASITEVKLAEELFKE 319
Y+IL DS K+GR AL+ ++M D +Y+SLI S + ++V A EL+ +
Sbjct: 882 YRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYAD 941
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
++G + PE+ + Y+ +GL+ + + A L++SDCI C ++ F R G
Sbjct: 942 MIKRGGI--PELS---IFFYLVKGLIR-----INRWEEA-LQLSDCI-CQMMVDFV-REG 988
Query: 380 YWAAVKVYEQL 390
+ + YE L
Sbjct: 989 FLGSSHDYEFL 999
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/506 (22%), Positives = 209/506 (41%), Gaps = 39/506 (7%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P S L+ +V+ + + +SL + + P T + L+ A +L
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L + G + L+ FN+ + G+ M + + + + + G + D Y ++ K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G + AAL L + K P + MY L D L K G +AL + E+GIL D
Sbjct: 173 NGQIK--AALHLLQEMEKSSVQP-NLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLD 229
Query: 294 PSIYASLI---CSFASITEVK--------------------LAEELFKEA---EEKGML- 326
Y SLI CS EV L + L KE E +G+L
Sbjct: 230 AVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLA 289
Query: 327 ------RDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
P++ LM Y V + ++ M L+ +++G+ K +
Sbjct: 290 MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A+ ++++L ++ +P +Y S+I+ C S +K+ EM VV Y+
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
++ K GRI +A+ ++ M KG +PN+ YN++MD + N+ + ++ M +
Sbjct: 410 ILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKS 469
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ PD ++Y +I+ Y + D + + E R + D A ++ L +I +
Sbjct: 470 GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHV 529
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNAL 584
+LL +M G D Y+ ++A
Sbjct: 530 QELLDEMCDSGQSPDVITYNILLDAF 555
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 181/441 (41%), Gaps = 40/441 (9%)
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFN 190
+W + L NV PD +T + L+ + + + A +L + GE ++ +N
Sbjct: 245 RWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYN 304
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ M GY + ++ +M G+ D Y +++ Y K ++ LF E ++
Sbjct: 305 ALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK 364
Query: 251 KLDST--------------------------------PFSTHMYKILCDSLGKSGRAFEA 278
L T P Y IL D+L K GR EA
Sbjct: 365 NLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEA 424
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
L M +KG+ + Y +++ + V +A+++F + G+ +P++ VL+
Sbjct: 425 LGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGL--EPDILNYNVLI 482
Query: 339 --YIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGC 395
Y + +V++ + + + M++ L I D S ++++G ++ +++ G
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNL-IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQ 541
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P +TY +++A+C+ + KA +F ++ + G ++V K +++ A
Sbjct: 542 SPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAED 600
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
+ + GC PNV Y L++ + + + L +ME PD +++ +I
Sbjct: 601 ALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLL 660
Query: 516 RAREFDMCVKFYNEFRMNGGV 536
+ E D K E G V
Sbjct: 661 QRNETDKAEKLREEMIARGLV 681
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 148/373 (39%), Gaps = 35/373 (9%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P T ++ L ++ + G A+ F ++ KGI + + LI + + A
Sbjct: 52 PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFS 111
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L + G + ++ + G++ K LD +++ ++NG S
Sbjct: 112 LLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K AA+ + +++ P V Y+++I+ C+ S A + ++ ++G V
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231
Query: 436 AYSS-----------------------------------MVAMYGKTGRIRDAMWLVAKM 460
Y+S ++ K GRI +A ++A M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+G +P++ YN+LM+ + +N+ + +L+ M +R + PD ++Y +I Y + +
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
D + + E V A ++ +I + KLL +M D Y+
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411
Query: 581 MNALRDAGLQMQA 593
++AL G ++A
Sbjct: 412 IDALCKEGRILEA 424
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/254 (17%), Positives = 101/254 (39%), Gaps = 35/254 (13%)
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
R AV + +++ P + ++ A R+ Y A +F ++Q KG + +
Sbjct: 34 RNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATF 93
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD-------------------- 477
+ ++ Y A L+A + G +PN+ +N++++
Sbjct: 94 TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 478 -------------MHGRAKN--LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
++G +KN ++ L +EME+ V P+ V Y+ +I +
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ ++ G ++D ++ + + +E+ +LL M E D+ ++ ++
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273
Query: 583 ALRDAGLQMQAQWL 596
AL G ++AQ +
Sbjct: 274 ALCKEGRILEAQGV 287
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/390 (18%), Positives = 152/390 (38%), Gaps = 11/390 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ + G E A + +N K P+ +LI ++K D +
Sbjct: 298 PDIVTYNALMEGYCSRENVHE-ARELFNRMVKR-GLEPDVLNYNVLIDGYCKTKMVDEAM 355
Query: 138 SLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
L ++ N++P + + L+ C R + L ++ + ++ +N +
Sbjct: 356 VLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDAL 415
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K + V M G+ + Y +M+ Y + +F L+
Sbjct: 416 CKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDI 475
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y +L + K+ EA+ F++M+ K ++ D + Y SLI ++ + +EL
Sbjct: 476 LN---YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532
Query: 317 FKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E + G + P+V +L+ + + +K + + + + + AIV+
Sbjct: 533 LDEMCDSG--QSPDVITYNILLDAFCKTQPFDKAISLFRQIVEG-IWPDFYTNHAIVDNL 589
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A + L+ GC P TY +INA C+ + +A + +M+
Sbjct: 590 CKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDA 649
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+ + ++ + + A L +M A+G
Sbjct: 650 ITFEIIIGVLLQRNETDKAEKLREEMIARG 679
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 124/525 (23%), Positives = 232/525 (44%), Gaps = 49/525 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR-PEKSTL-KLLIRYLVQSKKWDS 135
P+ F +HG+ + Y K++P P+ L ++I+ L ++K DS
Sbjct: 875 PNMFTFTILIHGLCRAGDIGT----AYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDS 930
Query: 136 IVSLSEDFK-IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAM 193
+ L ++ + + PD T S +V S V++ K A L++ ++ G ++ ++S +
Sbjct: 931 ALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLL 990
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G K + ++M +G + Y I++ + K+G ++ L E
Sbjct: 991 HGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ 1050
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+ Y +L D+ K G+A +A+ M EKG + + Y SL+ F EV+ A
Sbjct: 1051 PNVVT---YTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERA 1107
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+L +KG C+ V+ Y ++ G
Sbjct: 1108 CQLLSSMIQKG-------CVPNVVSYN----------------------------TVIAG 1132
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
K V + EQ++S C+P VT+ +II+A C+ A ++F +Q+ G
Sbjct: 1133 LCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPN 1192
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKM-KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+V Y+S+V K+ R A +L+ +M + +GC P++ YN+++D ++K + + KL+
Sbjct: 1193 LVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLF 1252
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSK 551
+M + PD V+Y+ VIS+ + R D E + G AI G ++ F K
Sbjct: 1253 LQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVL-ELMLKNGFDPGAITYGTLIDGFCK 1311
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+++ +++LQ + S+G+ D + ++ L G QA L
Sbjct: 1312 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGEL 1356
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 125/596 (20%), Positives = 247/596 (41%), Gaps = 49/596 (8%)
Query: 11 CSSALINTTYTCMKKSYRHTLFSTC--KAFPFVTVNPSSIINHRFFQVNASTNFPTIELN 68
C + L+N + S H LF + + TV S++I+ + A P EL
Sbjct: 128 CCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGF---IRAGKILPAYELF 184
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
+ + + A S L G+ Q + + +K P P+ T +I L
Sbjct: 185 DEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCP---PDSVTYNTMINGLS 241
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALL 187
+S + D + L E+ P+ + + ++ +A + + A LL+ +T G ++
Sbjct: 242 KSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVV 301
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE- 246
++ + + G KL V +KM G + Y +++ + ++GD + L +
Sbjct: 302 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 361
Query: 247 -------------------CKSRKLD------------STPFSTHMYKILCDSLGKSGRA 275
C+ ++ P Y + K+G+
Sbjct: 362 TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKL 421
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
EA M +G D + ++LI + + A+EL + + GM P+V
Sbjct: 422 REAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMS--IGMDCAPDVVAYS 479
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLK---ISDCIS-CAIVNGFSKRRGYWAAVKVYEQLI 391
+L I K L ES + +K D ++ ++V+G K R A +++++
Sbjct: 480 IL--IHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMR 537
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+ G +P VTY+ +I+++C+ A K+ M++ VV YS+++ K G +
Sbjct: 538 AAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVD 597
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
A + +M GC PN+ YN+L+D + + Q ++ + M ++ TPD ++YT +I
Sbjct: 598 KAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLI 657
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+ A + + E + G + DR G ++ K + +E + +LL++M++
Sbjct: 658 NGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 114/512 (22%), Positives = 211/512 (41%), Gaps = 35/512 (6%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A + + E ++ P+ T ++ LV+S K D L ED P+ T S L+
Sbjct: 931 ALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLL 990
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
+A K A LLQ G ++ +N+ + G+ KL + E+M G
Sbjct: 991 HGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ 1050
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALF--------------------LECKSRKLD-STPF 257
+ Y +++A+ K G +E L + CK +++ +
Sbjct: 1051 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 1110
Query: 258 STHM-----------YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+ M Y + L K+ + E + M + D + ++I +
Sbjct: 1111 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 1170
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
V +A ELF +E G + LV + ++ ++ M + D I
Sbjct: 1171 TYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII 1230
Query: 367 S-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
+ +++G K + A K++ Q++S G P VTY+ +I++ C+ +A V M
Sbjct: 1231 TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM 1290
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+ GFD + Y +++ + KTG + A+ ++ + +KG P+V ++ +D + L
Sbjct: 1291 LKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRL 1350
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
RQ +L + M R + PD V+Y T++ + A + V + R G D A +
Sbjct: 1351 RQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTL 1410
Query: 546 VG-VFSKLSQIEELVKLLQDMKSEGTKLDERL 576
VG + K S + L ++ + M G KL+ L
Sbjct: 1411 VGHLVDKKSYKDLLAEVSKSMVDTGFKLNHEL 1442
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 164/354 (46%), Gaps = 4/354 (1%)
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
L+ KL +P + + IL L ++G A + ++M G+ ++ ++ +I
Sbjct: 864 LQVYRNKLCCSP-NMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGL 922
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
S ++ A ELFKE EE G P+V +V ++ G V+ +VE M +
Sbjct: 923 CSARKLDSALELFKEMEESGSC-PPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSP 981
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
+ ++++G K A + +++ GC P VTY +II+ +C++ +A +
Sbjct: 982 NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL 1041
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
EM G VV Y+ ++ + K G+ DA+ LV M KG PN++ YNSL+DM +
Sbjct: 1042 EEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKK 1101
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
+ + +L M ++ P+ VSY TVI+ +A + V + N V D
Sbjct: 1102 DEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTF 1161
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ K +++ +L ++ G + Y+S ++ L + QA++L
Sbjct: 1162 NTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL 1215
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 147/333 (44%), Gaps = 3/333 (0%)
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L + L K+ + +A FR E D Y++LI F ++ A ELF E KG
Sbjct: 132 LLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKG 191
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAA 383
+ V ++ + G V+ + +K D ++ ++NG SK A
Sbjct: 192 LKAHAGVHKSILRGLCDAGQCSDA--VLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDA 249
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+++ E+++ G P +Y ++++ +C+ A + +M +G VV+Y++++
Sbjct: 250 IRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVING 309
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K ++ +A ++ KM +GC+PNV Y +L+D R +L +L ++M R P+
Sbjct: 310 LCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPN 369
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
++Y ++ + R + + + G D ++ F K ++ E LL+
Sbjct: 370 AITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLE 429
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M G + D + ++AL A AQ L
Sbjct: 430 QMIRRGCRPDVACLSTLIDALCKAAAIDSAQEL 462
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 111/575 (19%), Positives = 222/575 (38%), Gaps = 102/575 (17%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ +++ + G K + E AY E +P T +L+ + K + +
Sbjct: 1016 PNIVTYNTIIDGHCKLGRIDE-AYHLLEEMVD-GGCQPNVVTYTVLLDAFCKCGKAEDAI 1073
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
L E +P+ T + L+ + + + A LL I G + ++++N+ + G
Sbjct: 1074 GLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGL 1133
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY---YKIGDSEKVAALFLE------- 246
K + +L+ E+M S V D + I++A Y++ + ++ L E
Sbjct: 1134 CKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNL 1193
Query: 247 ----------CKSRKLDSTPFSTH-------------MYKILCDSLGKSGRAFEALKFFR 283
CKSR+ D + Y + D L KS R A K F
Sbjct: 1194 VTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFL 1253
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIE 341
M G+ D Y+ +I S + A + + + G DP L+ + +
Sbjct: 1254 QMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGF--DPGAITYGTLIDGFCK 1311
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
G ++K L++++ + +K D ++ +I ++ SKR A ++ E ++ G +P V
Sbjct: 1312 TGNLDKALEILQLLL-SKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTV 1370
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA------------------ 442
TY +++ +C +L A +F M+Q G + Y+++V
Sbjct: 1371 TYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKS 1430
Query: 443 ----------------------------------MYGKTGRIRDAMWLVAKMKAKGCEPN 468
M+GK G +DA + M + N
Sbjct: 1431 MVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQR----N 1486
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY- 527
V ++++++ ++ K Q LW+ M V PD V++ ++++ A D V +
Sbjct: 1487 VVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFV 1546
Query: 528 ---NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
++ + GV + ++G +++ E+L+
Sbjct: 1547 SISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLM 1581
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
C PN++ + L+ RA ++ +L KEM R V + + + VI AR+ D +
Sbjct: 873 CSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSAL 932
Query: 525 KFYNEFRMNGGVI-DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ + E +G D +V K ++++ +L++DM S+G + Y S ++
Sbjct: 933 ELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHG 992
Query: 584 LRDAGLQMQAQWLQQ 598
L AG +A L Q
Sbjct: 993 LCKAGKLDEATALLQ 1007
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 196/440 (44%), Gaps = 9/440 (2%)
Query: 123 LIRYLVQSKKWDSIVSLSE----DFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
L++ L S W+ + L E + I N D H +V R + +A+ L V
Sbjct: 154 LLKALDYSGNWEKALLLFEWSVLNLGIANEKIDRHAIELMVRILGRESQHTVASKLFDVI 213
Query: 179 -ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
+ D + + A+ + + Y++ Y+ I ++E+M +G+ Y +++ Y K+G S
Sbjct: 214 PLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRS 273
Query: 238 -EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+K+ L E +SR LD F+ C G+ G EA +FF +K +G
Sbjct: 274 WDKILELLDEMRSRGLDFDEFTCSTVLSAC---GREGLIDEAREFFSGLKSEGYKPGTVT 330
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y +L+ F A + E EE D ++V Y+ G E+ V+++M
Sbjct: 331 YNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMA 390
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ + + I+N + + A+++++Q++ GC+P TY +++ + +L
Sbjct: 391 SKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSE 450
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ K+ M+ G + +++M+AM GK G + + +MK G EP+ +N+L+
Sbjct: 451 EMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLI 510
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+GR + K+ +EM + +P +Y +++A R ++ + R G
Sbjct: 511 SAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFR 570
Query: 537 IDRAIAGIMVGVFSKLSQIE 556
+MV ++K ++
Sbjct: 571 PSETSYSLMVHSYAKGGNVK 590
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 143/338 (42%), Gaps = 1/338 (0%)
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV- 310
LD Y + + ++G+ A++ F M E G+ Y ++ + +
Sbjct: 215 LDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSW 274
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
EL E +G+ D C ++ EGL+++ + +K+ K A+
Sbjct: 275 DKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNAL 334
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++ F K + A+ V ++ C P VTY ++ AY R + + V M KG
Sbjct: 335 LHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGI 394
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
V Y++++ YG+ G I A+ + +M GC PNV YN+++ M G+ ++ K
Sbjct: 395 MPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMK 454
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
+ M+ +P+ +++ T+++ + + + E + G DR ++ +
Sbjct: 455 ILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYG 514
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ + K+ ++M G Y++ +NAL G
Sbjct: 515 RCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRG 552
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 107/560 (19%), Positives = 229/560 (40%), Gaps = 68/560 (12%)
Query: 67 LNRDSHHQTA------------VPDAKKFDSFLHGMLKDPQTQELA--YDYYNEAKKLPE 112
L R+S H A V D + + + LH + + ++ NE+ P
Sbjct: 197 LGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPS 256
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
L + Y + WD I+ L ++ + + D TCS ++++C R A
Sbjct: 257 LVTYNVMLDV---YGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAR 313
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
++G + + +N+ + + K ++ + V +M+ D+ Y +++ AY
Sbjct: 314 EFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAY 373
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ G E+ A + S+ + + Y + ++ G+ G +AL+ F M E G +
Sbjct: 374 VRAGFHEEGAVVIDAMASKGIMPNAVT---YTTIINAYGRVGDIDKALEMFDQMMELGCV 430
Query: 292 EDPSIYASLICSFASITEVKLAEELFK---EAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
+ + Y +++ + + L+EE+ K + G + ++ M ++G+ +
Sbjct: 431 PNVATYNAVL---GMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYV 487
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
V MKN + +++ + + A K++E++I G P TY +++NA
Sbjct: 488 NQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNA 547
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD--------------AM 454
R + AE V ++M+ KGF +YS MV Y K G ++
Sbjct: 548 LARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPS 607
Query: 455 WLVAK---------------------MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
W++ + ++ G +P++ + NS++ + + + ++ +
Sbjct: 608 WMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLR 667
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM---NGGVIDRAIAGIMVGVFS 550
+ + PD V++ +++ Y R + C K RM +GG D ++ F
Sbjct: 668 LIHDAGLQPDLVTHNSLMDMYARGGD---CWKAEEVLRMLQTSGGKPDLVSYNTVIKGFC 724
Query: 551 KLSQIEELVKLLQDMKSEGT 570
+ ++E +++L +M S G
Sbjct: 725 RKGLMQEGIRILSEMTSIGV 744
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 153/340 (45%), Gaps = 5/340 (1%)
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
AM G +H Y + V+ +MK+ G D + ++ AY + G + A + E K
Sbjct: 476 AMCGKKGMHKYVNQ--VFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMI--K 531
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
+P + Y L ++L + G A DM+ KG + Y+ ++ S+A VK
Sbjct: 532 AGFSP-CINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVK 590
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
E + K + + + LVL + + ++++ K + +++
Sbjct: 591 GIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSML 650
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ F+K Y A ++ + G P VT+ S+++ Y R KAE+V +Q G
Sbjct: 651 SIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGK 710
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+V+Y++++ + + G +++ + ++++M + G P ++ YN+ + + ++ +
Sbjct: 711 PDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDV 770
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
M P++++Y V Y +AR +D + F ++ +
Sbjct: 771 ISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIK 810
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 185/441 (41%), Gaps = 45/441 (10%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA------- 165
++P T L+ ++ + +S+ + + N PDA T + +VA+ VRA
Sbjct: 324 YKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGA 383
Query: 166 -------RKFKIAN-----TLLQVFITDGEI--ALLAFNSAM--------GGYNK-LHMY 202
K + N T++ + G+I AL F+ M YN L M
Sbjct: 384 VVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGML 443
Query: 203 YSTILVYEKMKSAGIVLDSGC------YCQIMEAYYKIGDSEKVAALFLECKS--RKLDS 254
L E MK G + +GC + ++ K G + V +F E K+ + D
Sbjct: 444 GKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDR 503
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
F+T L + G+ G +A K +M + G + Y +L+ + A + K AE
Sbjct: 504 DTFNT-----LISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAE 558
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE-SMKNAKLKISDCISCAIVNG 373
+ + KG R E L++ +G K ++++E S+ + + S + +V
Sbjct: 559 SVILDMRNKG-FRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLA 617
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
K R + ++ L G P V S+++ + + +Y +A ++ + G
Sbjct: 618 NFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPD 677
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+V ++S++ MY + G A ++ ++ G +P++ YN+++ R +++ ++
Sbjct: 678 LVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILS 737
Query: 494 EMERRKVTPDKVSYTTVISAY 514
EM V P +Y T IS Y
Sbjct: 738 EMTSIGVGPCIFTYNTFISGY 758
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 45/294 (15%)
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
S E ++ +E K+ + G L KL+L I E + +S K L++ D
Sbjct: 93 SFLEFEVDKEEDKDVSDSGFLEYLSRKGKLILGSIIEQPLHSLASFFDSSKYELLQV-DL 151
Query: 366 ISCAIVNGFSKRRGYWA-AVKVYEQLISQGCIPGQVTYASIINAYCRI----ALYSKAEK 420
IS +S G W A+ ++E + I + I RI + ++ A K
Sbjct: 152 ISLLKALDYS---GNWEKALLLFEWSVLNLGIANEKIDRHAIELMVRILGRESQHTVASK 208
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+F + + V AY++++ Y +TG+ A+ + +M G P++ YN ++D++G
Sbjct: 209 LFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYG 268
Query: 481 R-AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+ ++ ++ +L EM R + D+ + +TV+SA R G+ID
Sbjct: 269 KMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGRE-----------------GLIDE 311
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
A + +KSEG K Y++ ++ AG+ +A
Sbjct: 312 A------------------REFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEA 347
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 468 NVWIYNSLMDMH---------GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
N+ I N +D H GR KL+ + D +YTT++ AY+R
Sbjct: 177 NLGIANEKIDRHAIELMVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTG 236
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ-IEELVKLLQDMKSEGTKLDERLY 577
++ ++ + +G +M+ V+ K+ + +++++LL +M+S G DE
Sbjct: 237 KYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTC 296
Query: 578 HSAMNALRDAGLQMQAQ 594
+ ++A GL +A+
Sbjct: 297 STVLSACGREGLIDEAR 313
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 172/372 (46%), Gaps = 3/372 (0%)
Query: 213 KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKS 272
++ G+ + I+ A G + + ALF E + + T Y L K+
Sbjct: 298 QATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKP---RTKAYNALLKGYVKT 354
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
G +A +M+++G+ D Y+ LI ++ + + A + KE E + + V
Sbjct: 355 GPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVF 414
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
+L+ Y + G +KT V++ MK+ +K +++ F K A+ +++++S
Sbjct: 415 SRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLS 474
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
+G P +VT+ ++I+ +C+ + AE++F M+++G C Y+ M+ YG R D
Sbjct: 475 EGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD 534
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
L+ KMK++G PNV + +L+D++G++ + +EM+ + P Y +I+
Sbjct: 535 MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 594
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
AY + + V + +G ++ F + + E +LQ MK G K
Sbjct: 595 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 654
Query: 573 DERLYHSAMNAL 584
D Y + M AL
Sbjct: 655 DVVTYTTLMKAL 666
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 186/443 (41%), Gaps = 41/443 (9%)
Query: 154 TCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTIL--VYE 210
T + L+ +C R + A L+ DG + + ++ + + + S +L +Y+
Sbjct: 201 TYNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYK 260
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
+++ + LD I+ + K GD + L ++ L + T + +L
Sbjct: 261 EIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSA---KTATLVSIISALA 317
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
SGR EA F ++++ GI Y +L+ + +K AE + E E++G+ D
Sbjct: 318 NSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEH 377
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
L+ Y+ G E V++ M+ ++ + + ++ G+ R + +V +++
Sbjct: 378 TYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEM 437
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
S G P + Y +I+ + GK +
Sbjct: 438 KSIGVKPDRQFYNVVIDTF-----------------------------------GKFNCL 462
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
AM +M ++G EP+ +N+L+D H + E++++ MERR P +Y +
Sbjct: 463 DHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIM 522
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
I++Y +D + + + G + + +V V+ K + + ++ L++MKS G
Sbjct: 523 INSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGL 582
Query: 571 KLDERLYHSAMNALRDAGLQMQA 593
K +Y++ +NA GL QA
Sbjct: 583 KPSSTMYNALINAYAQRGLSEQA 605
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 143/322 (44%), Gaps = 4/322 (1%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-DGEIALLAFNSAMGGYNKLHMYYSTI 206
V PD HT S L+ + V A +++ A +L+ T D + F+ + GY + T
Sbjct: 372 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTF 431
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
V ++MKS G+ D Y +++ + K + F S ++ + + L
Sbjct: 432 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVT---WNTLI 488
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
D K GR A + F M+ +G L + Y +I S+ + L + + +G+L
Sbjct: 489 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 548
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+ LV +Y + G ++ +E MK+ LK S + A++N +++R AV
Sbjct: 549 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNA 608
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ + S G P + S+INA+ ++A V M++ G VV Y++++ +
Sbjct: 609 FRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 668
Query: 447 TGRIRDAMWLVAKMKAKGCEPN 468
+ + + +M GC+P+
Sbjct: 669 VDKFQKVPGVYEEMIMSGCKPD 690
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 150/328 (45%), Gaps = 15/328 (4%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y IL +LG+S + +EA + +K L P Y +LI + A +++ A L
Sbjct: 171 LYSILIHALGRSEKLYEAFL----LSQKQTLT-PLTYNALIGACARNNDIEKALNLISRM 225
Query: 321 EEKGMLRDPEVCLKLVLMY------IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
+ G D V LV+ I+ ++++ +E KL++ + I+ GF
Sbjct: 226 RQDGYQSD-FVNYSLVIQSLTRCNKIDSVMLQRLYKEIE---RDKLELDVQLVNDIIMGF 281
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+K A+++ + G T SII+A +AE +F E++Q G
Sbjct: 282 AKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRT 341
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
AY++++ Y KTG ++DA +V++M+ +G P+ Y+ L+D + A + KE
Sbjct: 342 KAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKE 401
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
ME V P+ ++ +++ Y E+ + E + G DR +++ F K +
Sbjct: 402 METGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNC 461
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMN 582
++ + M SEG + D +++ ++
Sbjct: 462 LDHAMTTFDRMLSEGIEPDRVTWNTLID 489
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/464 (21%), Positives = 194/464 (41%), Gaps = 4/464 (0%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
LLIR VQ++K + + + L + C+ L+ V+ +A +
Sbjct: 120 LLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARS 179
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G E+ + N + K H M+ GI D Y ++ AY + G +
Sbjct: 180 GIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEA 239
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
+ + L T F+ Y + + L K GR A F +M G+ D + Y +L
Sbjct: 240 FEVMNSMSGKGLKPTLFT---YNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTL 296
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ A+++F + +G+ D L+ + G +++ L MK + L
Sbjct: 297 LVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGL 356
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ I ++NG+ + A+++ ++++ QGC V Y +I+N C+ L + A
Sbjct: 357 VPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANA 416
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+F EM ++G +++++ + K G + A+ L M K +P++ YN L+D
Sbjct: 417 LFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFC 476
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+ + + +LW EM RK+ P+ +SY +++ Y + ++E G
Sbjct: 477 KTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLV 536
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ + + + + + L M SEG D Y++ +N
Sbjct: 537 TCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGF 580
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 114/534 (21%), Positives = 227/534 (42%), Gaps = 33/534 (6%)
Query: 84 DSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDF 143
+S L G++K +LA++ YNE + TL +++ L + K D + D
Sbjct: 154 NSLLGGLVKMGWV-DLAWEVYNEIAR-SGIELNVYTLNIMVNALCKDHKIDDVKPFLIDM 211
Query: 144 KIYNVLPDAHTCSRLVASCVR----ARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKL 199
+ + D T + L+ + R F++ N++ + + L +N+ + G K
Sbjct: 212 EQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGL---KPTLFTYNAVINGLCKK 268
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
Y V+ +M S G+ D+ Y ++ + + + +F + R + S
Sbjct: 269 GRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLIS- 327
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ L ++G +AL +FRDMK G++ D IY LI + + A E+ +
Sbjct: 328 --FSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDK 385
Query: 320 AEEKGMLRDPEVCLKLVLMY--IEEGLVEKTL-----DVVESMKNAKLKISDCISCAIVN 372
E+G C V+ Y I GL +K L + + M + C +++
Sbjct: 386 MLEQG-------CALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIH 438
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G K A+ ++ + + P VTY +I+ +C+ KA +++ EM +
Sbjct: 439 GHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFP 498
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
++Y+ +V Y G + +A L +M KG +P + N+++ + R+ +L + ++
Sbjct: 499 NHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFL 558
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+M V PD ++Y T+I+ + + D N+ G D +++ F +
Sbjct: 559 GKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQ 618
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNA------LRDAGLQMQAQWLQQNF 600
+++E +L+ M G D Y + +N L++A + + LQ+ F
Sbjct: 619 GRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEA-FRFHDEMLQRGF 671
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 133/292 (45%)
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
D ++ LI S+ ++ + FK KG L C L+ ++ G V+ +V
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ + ++++ +VN K + +G VTY ++INAYCR
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
L +A +V M KG + Y++++ K GR A + +M + G P+ Y
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N+L+ R N + + ++ +M R V+PD +S++++I +R D + ++ + +
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKT 353
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+G V D I I++ + + + E +++ M +G LD Y++ +N L
Sbjct: 354 SGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGL 405
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 102/259 (39%), Gaps = 6/259 (2%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
+ VPD F + +HG K+ + + +K +P+ T +LI ++ +
Sbjct: 423 ERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQK--NIKPDIVTYNILIDGFCKTTE 480
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNS 191
+ L + + P+ + + LV A L I G + L+ N+
Sbjct: 481 MEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNT 540
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ GY + KM S G+ DS Y ++ + K +K L + +++
Sbjct: 541 VIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKG 600
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
L + Y ++ + + GR EA R M E+GI D S Y +LI + S +K
Sbjct: 601 LQPDVVT---YNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLK 657
Query: 312 LAEELFKEAEEKGMLRDPE 330
A E ++G + D +
Sbjct: 658 EAFRFHDEMLQRGFVPDDD 676
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/508 (22%), Positives = 212/508 (41%), Gaps = 55/508 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDY-YNEAKKLPEF--RPEKSTLKLLIRYLVQSKKWD 134
P + F+S +H + Y Y Y KK+ + +P +LI + ++K
Sbjct: 367 PSRRIFNSLIHAYCRSGD-----YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP 421
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMG 194
S+ L K Y + DAH V K ++N +
Sbjct: 422 SLDVLELAEKAYGEMLDAH---------VVLNKVNVSN----------------LARCLC 456
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
G K YS I +M S G + D+ Y +++ + LF E KS +
Sbjct: 457 GAGKFEKAYSII---REMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP 513
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
F+ Y IL DS K G +A K+F +M G + Y +LI ++ ++ A
Sbjct: 514 DVFT---YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK-NAKL-------KISDC- 365
ELF+ +G + + L+ + + G +EK + M+ NA + KI D
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630
Query: 366 -------ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
A+V+G K A + + + +GC P + Y ++I+ +C++ +A
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+ VF +M ++G+ V YSS++ K R+ A+ ++++M C PNV IY ++D
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDG 750
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ + +L ME + P+ V+YT +I + +A + D C++ + G +
Sbjct: 751 LCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN 810
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+++ +++ +LL +MK
Sbjct: 811 FVTYRVLINHCCAAGLLDDAHQLLDEMK 838
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/526 (20%), Positives = 227/526 (43%), Gaps = 45/526 (8%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
EF+ + +I L ++ ++ + + + +P+ T L+ C+R R+
Sbjct: 294 EFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRC 353
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+L + IT+G + FNS + Y + Y + +KM G CQ
Sbjct: 354 KRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG--------CQPGYV 405
Query: 231 YYKI-----GDSEKVAALFLECKSRKLDSTPFSTH--MYKILCDSLGK----SGRAFEAL 279
Y I +EK+ +L + + K H + K+ +L + +G+ +A
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
R+M KG + D S Y+ +I + ++V A LF+E + ++ D L+ +
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ GL+++ + M + A+++ + K R +A +++E ++S+GCIP
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKG----------------FDKCVVAYSSMVAM 443
VTY ++I+ +C+ KA +++ M+ D + Y ++V
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG 645
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K ++++A L+ M +GCEPN +Y++L+D + L + + ++ +M R P+
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+Y+++I + + D+ +K + N + I M+ K+ + +E +L+
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765
Query: 564 DMKSEGTKLDERLYHSAMNALRDAG---------LQMQAQWLQQNF 600
M+ +G + Y + ++ AG QM A+ NF
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNF 811
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/495 (18%), Positives = 201/495 (40%), Gaps = 44/495 (8%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
++P + T L+R +++ + D+ + + D +T V +A +++ A
Sbjct: 228 YKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREAL 287
Query: 173 TLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY----CQIM 228
L++ + ++ + + + G + ++ + +M+S+ + + Y C +
Sbjct: 288 ALIEK--EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCL 345
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
++G +++ ++ + + S ++ L + +SG A K + M +
Sbjct: 346 RK-RQLGRCKRILSMMIT------EGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398
Query: 289 GILEDPSIYASL---ICS---FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
G +Y L IC S+ ++LAE+ + E + ++ + L
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
G EK ++ M + ++ A ++E++ S +P TY
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+I+++C++ L +A K F EM + G VV Y++++ Y K ++ A L M +
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
+GC PNV Y +L+D H ++ + + +++ M PD Y
Sbjct: 579 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY--------------- 623
Query: 523 CVKFYNEFRMNGGVI-DRAI--AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
F+++ G I D I G +V K +++E LL M EG + + +Y +
Sbjct: 624 -------FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDA 676
Query: 580 AMNALRDAGLQMQAQ 594
++ G +AQ
Sbjct: 677 LIDGFCKVGKLDEAQ 691
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 136/333 (40%), Gaps = 17/333 (5%)
Query: 275 AFEALKFFRDMKEKGILEDPS--IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
A E L +D+ K PS Y +L+ F + A + +E + G D
Sbjct: 216 ALEELGRLKDLGYK-----PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTL 270
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
V + + G + L ++E + K+ I +++G + + A+ ++ S
Sbjct: 271 GCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRS 327
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
CIP VTY ++ R + +++ M +G ++S++ Y ++G
Sbjct: 328 SSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSY 387
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLM-DMHGRAK-----NLRQVEKLWKEMERRKVTPDKVS 506
A L+ KM GC+P +YN L+ + G K L EK + EM V +KV+
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN 447
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+ + A +F+ E G + D + ++G+ S+++ L ++MK
Sbjct: 448 VSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQ-WLQQ 598
S D Y +++ GL QA+ W +
Sbjct: 508 SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 222/501 (44%), Gaps = 49/501 (9%)
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
E K F P+ T +I + + D + + + P+ T + L+A+ RA
Sbjct: 14 EEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVTYTALIAAFARA 70
Query: 166 RKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
+K + A LL+ G L+ +N + KL M + V +KM G + +
Sbjct: 71 KKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTF 130
Query: 225 CQIMEAYYKIG---DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
+++ + K G D+ K+ + + R + Y L D L KS + EA +
Sbjct: 131 NSLVDGFCKRGNVDDARKLLGIMVAKGMRP------NVVTYSALIDGLCKSQKFLEAKEV 184
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+MK G+ D Y++LI +++ AE++ + G D V ++ + +
Sbjct: 185 LEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 244
Query: 342 EGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQG-CIPGQ 399
G + + ++ M+ + K D ++ +++G K A + +Q+ G +P
Sbjct: 245 SGKLLEAQKTLQEMRKQR-KSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDV 303
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
VTY+++IN C+ + +A+K+ M + G + VV Y++++ K GR+ +A +L+
Sbjct: 304 VTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 363
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
MK GC PNV Y +L+ +A+ + + E++ +EM P+ V+Y T+++
Sbjct: 364 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG------ 417
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+CV ++ + ++LV+ ++D ++E + D Y +
Sbjct: 418 --LCVS------------------------GRIKEAQQLVQRMKDGRAECSP-DAATYRT 450
Query: 580 AMNALRDAGLQMQAQWLQQNF 600
+NAL + L +A+ L +
Sbjct: 451 IVNALMSSDLVQEAEQLLEQM 471
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 177/400 (44%), Gaps = 42/400 (10%)
Query: 203 YSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMY 262
++ + + E+MKSAG D+ + I+ A GD + R + P + Y
Sbjct: 7 HAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHL-----RSMGCDP-NVVTY 60
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
L + ++ + EA+K +M+E+G + Y L+ + ++ V A+++ K+ E
Sbjct: 61 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
G P V T + ++V+GF KR
Sbjct: 121 GGFA--PNV---------------MTFN------------------SLVDGFCKRGNVDD 145
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A K+ ++++G P VTY+++I+ C+ + +A++V EM+ G YS+++
Sbjct: 146 ARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIH 205
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
K +I +A ++ +M GC P+V +Y+S++ ++ L + +K +EM +++ +P
Sbjct: 206 GLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSP 265
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKL 561
D V+Y TVI + + ++ + +G V+ + ++ K + E KL
Sbjct: 266 DVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKL 325
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
L M G D Y + ++ L G +A++L Q +
Sbjct: 326 LDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMK 365
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 162/427 (37%), Gaps = 89/427 (20%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKL------PEFRPEKSTLKLLIRYLVQSK 131
P+ F+S + G K ++A+KL RP T LI L +S+
Sbjct: 125 PNVMTFNSLVDGFCK--------RGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNS 191
K+ + E+ K V PDA T S L+ +A K + A +L+
Sbjct: 177 KFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLR--------------- 221
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+M +G D Y I+ A+ K G + E RK
Sbjct: 222 -------------------RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQE--MRK 260
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG-ILEDPSIYASLICSFASITEV 310
+P Y + D L K G+ EA M+E G +L D Y+++I +
Sbjct: 261 QRKSP-DVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDML 319
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A++L + G C V+ Y I
Sbjct: 320 VEAQKLLDRMCKAG-------CNPDVVTYT----------------------------TI 344
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++G K A + + + GC P VTY ++I+ C+ +AE+V EM+ G
Sbjct: 345 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 404
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK--AKGCEPNVWIYNSLMDMHGRAKNLRQV 488
+V Y++MV +GRI++A LV +MK C P+ Y ++++ + +++
Sbjct: 405 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 464
Query: 489 EKLWKEM 495
E+L ++M
Sbjct: 465 EQLLEQM 471
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
A +L +L +EM+ PD ++T +I+A A + D + + V+
Sbjct: 3 AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYT- 61
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ F++ ++EE +KLL++M+ G + Y+ ++AL
Sbjct: 62 --ALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDAL 102
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 180/436 (41%), Gaps = 42/436 (9%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
FNS + GY + + +++KM G D Y ++E + + G ++ LF E
Sbjct: 48 TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEM 107
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+ HMY L L K+GR E L R MKE G YA+++
Sbjct: 108 DQPDM-------HMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWE 160
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+ K AEE+ +E EKG+ C ++ Y +EG + L V+E MK K +
Sbjct: 161 RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 220
Query: 368 CAIVNGF-------------SKRR--GYWAAVKVYEQLISQGCIPG-------------- 398
A+V GF +K R G Y LI CI G
Sbjct: 221 NALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 280
Query: 399 ------QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
Q TY ++INA C+ +A +F ++ +G V ++S++ K+G++
Sbjct: 281 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDI 340
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A + KM + GC P+ + Y+S ++ + K ++ EM ++ V P V+YT VI
Sbjct: 341 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH 400
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ R + + + + E +G D + + ++ E +L +M G +
Sbjct: 401 KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 460
Query: 573 DERLYHSAMNALRDAG 588
D Y++ M+ G
Sbjct: 461 DTMAYNTLMDGHASIG 476
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 116/560 (20%), Positives = 198/560 (35%), Gaps = 76/560 (13%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PDA F+S + G + Q ++A D +++ L F + + LI ++ + D V
Sbjct: 44 PDAYTFNSLIVGYCRTNQV-DVARDLFDKMP-LRGFAQDVVSYAALIEGFCETGRIDEAV 101
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRA-------------------------------- 165
L + PD H + LV +A
Sbjct: 102 ELFGEMD----QPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFR 157
Query: 166 ---RKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
RK K A +LQ G ++ + + Y K + V E MK G +
Sbjct: 158 CWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNV 217
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y +++ + G K AL K R P + Y +L G A +
Sbjct: 218 WTYNALVQGFCNEGKVHKAMALL--NKMRVCGVNPDAV-TYNLLIRGQCIDGHIESAFRL 274
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
R M+ G++ D Y +LI + A LF E +G+ + L+ +
Sbjct: 275 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 334
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G V+ +E M +A + + K +G + +++ + P V
Sbjct: 335 SGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 394
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y +I+ + Y + + EM G + VV Y++ + Y GR+ +A ++ +M
Sbjct: 395 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMS 454
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR--- 518
G + YN+LMD H + K+M P++ +Y ++ R R
Sbjct: 455 KNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVE 514
Query: 519 ---------------------EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
FD+ K NEF N G + G FS+ + EE
Sbjct: 515 DVLPLTPAGVWKAIELTDVFGLFDVMKK--NEFLPNSGTYSSILEG-----FSEDGRTEE 567
Query: 558 LVKLLQDMKSEGTKLDERLY 577
L+ MK + L+E +Y
Sbjct: 568 ATSLVSLMKEDSISLNEDIY 587
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 166/429 (38%), Gaps = 27/429 (6%)
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV-ASCVR 164
E KL +P T L++ K ++L ++ V PDA T + L+ C+
Sbjct: 206 ELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCID 265
Query: 165 ARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGC 223
+ A LL++ DG IA +N+ + K +++ +++ GI ++
Sbjct: 266 GH-IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVT 324
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
+ ++ K G + +A FLE K TP T+ Y + L K + E L F
Sbjct: 325 FNSLINGLCKSGKVD-IAWKFLE-KMVSAGCTP-DTYTYSSFIEHLCKMKGSQEGLSFIG 381
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIE 341
+M +K + Y +I L + E G +P+V M Y
Sbjct: 382 EMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC--NPDVVTYTTSMRAYCI 439
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
EG + + +V+ M + + +++G + AV + +Q+ S +P Q T
Sbjct: 440 EGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFT 499
Query: 402 YASIINAYCRIAL-----------------YSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
Y ++ R+ L + +F M++ F YSS++ +
Sbjct: 500 YFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGF 559
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ GR +A LV+ MK N IY +L+ ++K L M + P
Sbjct: 560 SEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHL 619
Query: 505 VSYTTVISA 513
+SY ++S
Sbjct: 620 MSYQHLLSG 628
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/508 (22%), Positives = 212/508 (41%), Gaps = 55/508 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDY-YNEAKKLPEF--RPEKSTLKLLIRYLVQSKKWD 134
P + F+S +H + Y Y Y KK+ + +P +LI + ++K
Sbjct: 367 PSRRIFNSLIHAYCRSGD-----YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP 421
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMG 194
S+ L K Y + DAH V K ++N +
Sbjct: 422 SLDVLELAEKAYGEMLDAH---------VVLNKVNVSN----------------LARCLC 456
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
G K YS I +M S G + D+ Y +++ + LF E KS +
Sbjct: 457 GAGKFEKAYSII---REMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP 513
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
F+ Y IL DS K G +A K+F +M G + Y +LI ++ ++ A
Sbjct: 514 DVFT---YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK-NAKL-------KISDC- 365
ELF+ +G + + L+ + + G +EK + M+ NA + KI D
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630
Query: 366 -------ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
A+V+G K A + + + +GC P + Y ++I+ +C++ +A
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+ VF +M ++G+ V YSS++ K R+ A+ ++++M C PNV IY ++D
Sbjct: 691 QMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDG 750
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ + +L ME + P+ V+YT +I + +A + D C++ + G +
Sbjct: 751 LCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN 810
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+++ +++ +LL +MK
Sbjct: 811 FVTYRVLINHCCAAGLLDDAHQLLDEMK 838
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/526 (20%), Positives = 227/526 (43%), Gaps = 45/526 (8%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
EF+ + +I L ++ ++ + + + +P+ T L+ C+R R+
Sbjct: 294 EFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRC 353
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+L + IT+G + FNS + Y + Y + +KM G CQ
Sbjct: 354 KRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG--------CQPGYV 405
Query: 231 YYKI-----GDSEKVAALFLECKSRKLDSTPFSTH--MYKILCDSLGK----SGRAFEAL 279
Y I +EK+ +L + + K H + K+ +L + +G+ +A
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
R+M KG + D S Y+ +I + ++V A LF+E + ++ D L+ +
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ GL+++ + M + A+++ + K R +A +++E ++S+GCIP
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKG----------------FDKCVVAYSSMVAM 443
VTY ++I+ +C+ KA +++ M+ D + Y ++V
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDG 645
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K ++++A L+ M +GCEPN +Y++L+D + L + + ++ +M R P+
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+Y+++I + + D+ +K + N + I M+ K+ + +E +L+
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765
Query: 564 DMKSEGTKLDERLYHSAMNALRDAG---------LQMQAQWLQQNF 600
M+ +G + Y + ++ AG QM A+ NF
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNF 811
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/495 (18%), Positives = 201/495 (40%), Gaps = 44/495 (8%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
++P + T L+R +++ + D+ + + D +T V +A +++ A
Sbjct: 228 YKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREAL 287
Query: 173 TLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY----CQIM 228
L++ + ++ + + + G + ++ + +M+S+ + + Y C +
Sbjct: 288 ALIEK--EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCL 345
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
++G +++ ++ + + S ++ L + +SG A K + M +
Sbjct: 346 RK-RQLGRCKRILSMMIT------EGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398
Query: 289 GILEDPSIYASL---ICS---FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
G +Y L IC S+ ++LAE+ + E + ++ + L
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
G EK ++ M + ++ A ++E++ S +P TY
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+I+++C++ L +A K F EM + G VV Y++++ Y K ++ A L M +
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
+GC PNV Y +L+D H ++ + + +++ M PD Y
Sbjct: 579 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY--------------- 623
Query: 523 CVKFYNEFRMNGGVI-DRAI--AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
F+++ G I D I G +V K +++E LL M EG + + +Y +
Sbjct: 624 -------FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDA 676
Query: 580 AMNALRDAGLQMQAQ 594
++ G +AQ
Sbjct: 677 LIDGFCKVGKLDEAQ 691
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 136/333 (40%), Gaps = 17/333 (5%)
Query: 275 AFEALKFFRDMKEKGILEDPS--IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
A E L +D+ K PS Y +L+ F + A + +E + G D
Sbjct: 216 ALEELGRLKDLGYK-----PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTL 270
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
V + + G + L ++E + K+ I +++G + + A+ ++ S
Sbjct: 271 GCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRS 327
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
CIP VTY ++ R + +++ M +G ++S++ Y ++G
Sbjct: 328 SSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSY 387
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLM-DMHGRAK-----NLRQVEKLWKEMERRKVTPDKVS 506
A L+ KM GC+P +YN L+ + G K L EK + EM V +KV+
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN 447
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+ + A +F+ E G + D + ++G+ S+++ L ++MK
Sbjct: 448 VSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQ-WLQQ 598
S D Y +++ GL QA+ W +
Sbjct: 508 SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540
>gi|9755886|emb|CAC01940.1| 67kD chloroplastic RNA-binding protein, P67.1 [Raphanus sativus]
Length = 700
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 167/352 (47%), Gaps = 9/352 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y M+ + K D EK LF E R K D+ F+T L + G A+++
Sbjct: 176 YNVTMKVFRKSKDLEKSEKLFDEMLQRGVKPDNATFTT-----LISCARQCGLPKRAVEW 230
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
F M G+ D A++I ++ V++A L+ A + DP L+ +Y
Sbjct: 231 FEKMPSFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGY 290
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G + L++ E MK+ +K + I +++ K + W A +++ LIS G P T
Sbjct: 291 AGNYDGCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWST 350
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
YA++I AY R A ++ +M+ KG + V+ Y+++++M G + +A + MK
Sbjct: 351 YAALIRAYGRARYGEDALVIYRQMKGKGLELTVILYNTLLSMCADIGYVDEAFEIFQDMK 410
Query: 462 AKG-CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ G CEP+ W ++SL+ ++ + + E +EM P T++I Y +A++
Sbjct: 411 SSGTCEPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQV 470
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
D V+ + + G D G ++ V ++ + EE+ KL++ ++ KL
Sbjct: 471 DDVVRTFEQVLELGIEPDDRFCGCLLNVMTQ-TPTEEIGKLIECVEKAKPKL 521
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 147/328 (44%), Gaps = 7/328 (2%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y + KS ++ K F +M ++G+ D + + +LI K A E F++
Sbjct: 175 LYNVTMKVFRKSKDLEKSEKLFDEMLQRGVKPDNATFTTLISCARQCGLPKRAVEWFEKM 234
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
G+ D ++ Y G VE L + + + K +I ++ + Y
Sbjct: 235 PSFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAGNY 294
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
+ +YE++ S G P V Y ++++ + +A + ++ GF+ Y+++
Sbjct: 295 DGCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAAL 354
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ YG+ DA+ + +MK KG E V +YN+L+ M + + +++++M+
Sbjct: 355 IRAYGRARYGEDALVIYRQMKGKGLELTVILYNTLLSMCADIGYVDEAFEIFQDMKSSGT 414
Query: 501 -TPDKVSYTTVISAYN---RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
PD +++++I+ Y+ R E + ++ E R G + ++ + K Q++
Sbjct: 415 CEPDSWTFSSLITVYSCCGRVSEAEAALR---EMREAGFEPTLFVLTSLIQCYGKAKQVD 471
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++V+ + + G + D+R +N +
Sbjct: 472 DVVRTFEQVLELGIEPDDRFCGCLLNVM 499
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 8/263 (3%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK--LDSTPFSTHMYKILC 266
+EKM S G+ D+ +++AY + G+ E +L+ ++ K +D FST L
Sbjct: 231 FEKMPSFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFST-----LI 285
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
G +G L + +MK G+ + IY L+ S A + K+ G
Sbjct: 286 RIYGYAGNYDGCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFE 345
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+ L+ Y E L + MK L+++ + +++ + A ++
Sbjct: 346 PNWSTYAALIRAYGRARYGEDALVIYRQMKGKGLELTVILYNTLLSMCADIGYVDEAFEI 405
Query: 387 YEQLISQG-CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++ + S G C P T++S+I Y S+AE EM++ GF+ + +S++ YG
Sbjct: 406 FQDMKSSGTCEPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYG 465
Query: 446 KTGRIRDAMWLVAKMKAKGCEPN 468
K ++ D + ++ G EP+
Sbjct: 466 KAKQVDDVVRTFEQVLELGIEPD 488
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 11/273 (4%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
E+A Y+ A+ ++R + T LIR + +D +++ E+ K V P+ +R
Sbjct: 260 EMALSLYDRART-EKWRIDPVTFSTLIRIYGYAGNYDGCLNIYEEMKSLGVKPNLVIYNR 318
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+ S +A++ A + + I++G E + + + Y + +++Y +MK G
Sbjct: 319 LLDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAALIRAYGRARYGEDALVIYRQMKGKG 378
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR---KLDSTPFSTHMYKILCDSLGKSG 273
+ L Y ++ IG ++ +F + KS + DS FS+ + C G
Sbjct: 379 LELTVILYNTLLSMCADIGYVDEAFEIFQDMKSSGTCEPDSWTFSSLITVYSC-----CG 433
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
R EA R+M+E G + SLI + +V F++ E G+ D C
Sbjct: 434 RVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQVDDVVRTFEQVLELGIEPDDRFC- 492
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
+L + + E+ ++E ++ AK K+ +
Sbjct: 493 GCLLNVMTQTPTEEIGKLIECVEKAKPKLGRVV 525
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 35/184 (19%)
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
K+EK+F EM Q+G ++++++ + G + A+ KM + G EP+ +++
Sbjct: 191 KSEKLFDEMLQRGVKPDNATFTTLISCARQCGLPKRAVEWFEKMPSFGLEPDNVTLAAMI 250
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D +GRA N+ L+ K D V+++T+I Y A +D C+ Y E
Sbjct: 251 DAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAGNYDGCLNIYEE------- 303
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
MKS G K + +Y+ ++++ A QA +
Sbjct: 304 ----------------------------MKSLGVKPNLVIYNRLLDSMGKAKRPWQATMI 335
Query: 597 QQNF 600
++
Sbjct: 336 HKDL 339
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 200/432 (46%), Gaps = 8/432 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
P+ T + L+ + ++ + ++L I G + ++ F + + G K+ + + +
Sbjct: 8 PNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVEL 67
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDSTPFSTHMYKILC 266
++ M + G D Y I+ KIG++ A LF +E +L+ +ST L
Sbjct: 68 FDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST-----LI 122
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
SL K R EAL F MK K I Y SLI + + K A L E ++
Sbjct: 123 HSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIM 182
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+ LV + +EG V V+++M ++ +++ G+S A K+
Sbjct: 183 PNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKL 242
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
++ +I++GC P +Y+ +IN YC+ +A+++F EM +G V+Y++++ +
Sbjct: 243 FDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQ 302
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
GR+R+A L M G PN++ Y L+D + L + +L++ M+ + P+ V
Sbjct: 303 LGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM 362
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y +++A ++ + ++E + G + I ++ K ++E ++ ++M+
Sbjct: 363 YNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 422
Query: 567 SEGTKLDERLYH 578
+G DE Y+
Sbjct: 423 DDGCPPDEFSYN 434
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 166/366 (45%), Gaps = 10/366 (2%)
Query: 223 CYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFF 282
C+CQ+ +G S + K KL P + + L + LGK G+ +A++ F
Sbjct: 19 CFCQLQRV--DLGFS-------VLAKGIKLGLQP-TIVTFTTLINGLGKVGKFAQAVELF 68
Query: 283 RDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
DM +G D Y ++I I E LA LFK+ EE G + L+ +
Sbjct: 69 DDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKY 128
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
V + LD+ MK + + +++ G + A + ++ S +P VT+
Sbjct: 129 RRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTF 188
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+++ +C+ AE V M + G + VV Y+S++ Y + +A L M
Sbjct: 189 NVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMIT 248
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
KGC+P+V+ Y+ L++ + +AK + + ++L+ EM + TP+ VSY T+I +
Sbjct: 249 KGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLRE 308
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ NG + + I++ F K + + +L + M+S K + +Y+ +N
Sbjct: 309 AQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVN 368
Query: 583 ALRDAG 588
A+ +G
Sbjct: 369 AMCKSG 374
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 191/445 (42%), Gaps = 5/445 (1%)
Query: 95 QTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHT 154
Q +L + + KL +P T LI L + K+ V L +D PD +T
Sbjct: 24 QRVDLGFSVLAKGIKLG-LQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYT 82
Query: 155 CSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMK 213
+ ++ + + +A L + G ++ ++ +++ + K + ++ MK
Sbjct: 83 YTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMK 142
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
+ I Y +++ ++ +AL E S L+ P + + +L D+ K G
Sbjct: 143 AKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS--LNIMP-NVVTFNVLVDTFCKEG 199
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
+ A + M E G+ D Y SL+ ++ TEV A +LF KG D
Sbjct: 200 KVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYS 259
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ 393
L+ Y + +++ + M + ++ +++G + A +++ + +
Sbjct: 260 ILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTN 319
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G +P TYA +++ +C+ KA ++F MQ +V Y+ +V K+G ++DA
Sbjct: 320 GNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDA 379
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
L +++ G +PNV IY ++++ + L + + ++ ME PD+ SY +I
Sbjct: 380 RELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRG 439
Query: 514 YNRAREFDMCVKFYNEFRMNGGVID 538
+ + ++ V E R G + D
Sbjct: 440 FLQHKDESRAVHLIGEMRDRGFITD 464
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 136/315 (43%)
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M+ G+ + LI F + V L + + + G+ L+ + G
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+ +++ + M + D I+NG K A +++++ GC VTY++
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I++ C+ ++A +F M+ K + Y+S++ R ++A L+ +M +
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
PNV +N L+D + + E + K M V PD V+Y +++ Y+ E
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
K ++ G D I++ + K +I+E +L +M +G+ + Y++ ++ L
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300
Query: 585 RDAGLQMQAQWLQQN 599
G +AQ L +N
Sbjct: 301 CQLGRLREAQDLFKN 315
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/465 (21%), Positives = 200/465 (43%), Gaps = 40/465 (8%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P+ T +I ++ + + L + K N++P A+TC ++ R + A+
Sbjct: 408 KPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASR 467
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+ ++ ++ G + + + + + G+ + + + + + M G+ D CY ++
Sbjct: 468 VFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVI---- 523
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
IG CKSRK++ EA + +M E+G+
Sbjct: 524 -IG----------LCKSRKME-----------------------EAKDYLVEMIERGLKP 549
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ Y +LI + E+++A+ FKE G+ + VC L+ Y +EG + +
Sbjct: 550 NVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIF 609
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
M + A+++G + A+++ + + +G +P TY SII+ +C+
Sbjct: 610 RCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQ 669
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
KA ++ M QKG ++ Y++++ K G I A L + KG N Y
Sbjct: 670 GGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTY 729
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+++D + ++ NL + +L+ EM + V PD Y+ +I + + + + E
Sbjct: 730 ATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQ 789
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
G ++ +M G F K ++ E +LL+DM + K D Y
Sbjct: 790 KGFASTSSLNALMDG-FCKSGKVIEANQLLEDMVDKHVKPDHVTY 833
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/542 (22%), Positives = 227/542 (41%), Gaps = 40/542 (7%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + +++ + G LK+ T + D +E KK P T ++I L + +
Sbjct: 409 PDTQTYNNMIEGYLKEQNTSRVK-DLLSEMKK-SNLVPTAYTCGMIINGLCRHGSIEDAS 466
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ E V P+A + L+ V+ +F+ A +L+V G + +L +NS + G
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K +M G+ + Y ++ Y K G+ + F E +
Sbjct: 527 CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPND 586
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ L D K G EA FR M + + D Y++LI +++ A EL
Sbjct: 587 V---VCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMEL 643
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E EKG++ D ++ + ++G + K + E M + + A++NG K
Sbjct: 644 LSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCK 703
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG------- 429
A ++++ + +G VTYA+II+ YC+ SKA ++F EM KG
Sbjct: 704 AGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFV 763
Query: 430 ----FDKC--------------------VVAYSSMVAM---YGKTGRIRDAMWLVAKMKA 462
D C + SS+ A+ + K+G++ +A L+ M
Sbjct: 764 YSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVD 823
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
K +P+ Y L+D H + L++ E+ + +M++R + P+ ++YT ++S YN A
Sbjct: 824 KHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSE 883
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
++E D +M+ K + +KL+ DM +G + + + H ++
Sbjct: 884 MFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLID 943
Query: 583 AL 584
L
Sbjct: 944 PL 945
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/426 (20%), Positives = 190/426 (44%), Gaps = 8/426 (1%)
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
++ L +N+ + G K + +M GI D+ Y ++E Y K ++ +V
Sbjct: 373 KLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKD 432
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L E K L T ++ M + + L + G +A + F M G+ + IY +LI
Sbjct: 433 LLSEMKKSNLVPTAYTCGM---IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIK 489
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ A + K ++KG+ D +++ + +E+ D + M LK
Sbjct: 490 GHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKP 549
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
+ A+++G+ K A + +++++ G P V ++I+ YC+ ++A +F
Sbjct: 550 NVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIF 609
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
M + V YS+++ + G+++ AM L+++ KG P+V+ YNS++ +
Sbjct: 610 RCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQ 669
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
+ + +L + M ++ ++P+ ++Y +I+ +A E + + ++ G +
Sbjct: 670 GGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTY 729
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG-----LQMQAQWLQ 597
++ + K + + +L +M +G D +Y + ++ R G L + + +Q
Sbjct: 730 ATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQ 789
Query: 598 QNFEGT 603
+ F T
Sbjct: 790 KGFAST 795
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 194/491 (39%), Gaps = 46/491 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + + +HG K + Q +A Y+ E P LI +
Sbjct: 549 PNVYTYGALIHGYCKSGEMQ-VADRYFKEMLGCG-IAPNDVVCTALIDGYCKEGSTTEAT 606
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
S+ +V PD T S L+ +R K + A LL F+ G + + +NS + G+
Sbjct: 607 SIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGF 666
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K ++E M GI + Y ++ K G+ E+ LF + L
Sbjct: 667 CKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNA 726
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--CSFASITEVKLAE 314
+ Y + D KSG +A + F +M KG+ D +Y++LI C TE L+
Sbjct: 727 VT---YATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALS- 782
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
LF E+ +KG + A+++GF
Sbjct: 783 -LFLESVQKGFASTSSLN------------------------------------ALMDGF 805
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A ++ E ++ + P VTY +I+ +C+ +AE+ F++MQ++
Sbjct: 806 CKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNA 865
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ Y+++++ Y GR + L +M AK EP+ ++ ++D H + + + KL +
Sbjct: 866 LTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDD 925
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M ++ K +I R +K + G + A +V F K +
Sbjct: 926 MLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGK 985
Query: 555 IEELVKLLQDM 565
++ ++L+ M
Sbjct: 986 MDGAARVLKSM 996
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 150/327 (45%), Gaps = 10/327 (3%)
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
NKL +++ Y M A ++ D Y ++ A+++ G++++ L E + + +P
Sbjct: 215 NKLELFWR---FYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEK--GCSP 269
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
S Y ++ L ++G EA + + M +KG++ D Y+ LI F A+ +
Sbjct: 270 -SLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLM 328
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+E KG+ L+ ++ +G + V E M +K++ A+V G K
Sbjct: 329 LEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCK 388
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A + ++I G P TY ++I Y + S+ + + EM++ A
Sbjct: 389 FGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNL--VPTA 446
Query: 437 YSSMVAMYG--KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
Y+ + + G + G I DA + M + G +PN IY +L+ H + ++ ++ K
Sbjct: 447 YTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKV 506
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFD 521
M+++ V PD + Y +VI ++R+ +
Sbjct: 507 MDKKGVQPDVLCYNSVIIGLCKSRKME 533
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/437 (19%), Positives = 176/437 (40%), Gaps = 26/437 (5%)
Query: 67 LNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQ---ELAYDYYNEAKKLPEFRPEKSTLKLL 123
L R H PD + + + +HG+L++ + Q EL ++ + P+ T +
Sbjct: 613 LGRSVH-----PDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG-----LVPDVFTYNSI 662
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE 183
I + L E + P+ T + L+ +A + + A L G
Sbjct: 663 ISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKG- 721
Query: 184 IALLAFNSA-----MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE 238
LA N+ + GY K ++++M G+ DS Y +++ K G++E
Sbjct: 722 ---LAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTE 778
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
K +LFLE + ST L D KSG+ EA + DM +K + D Y
Sbjct: 779 KALSLFLESVQKGFASTS----SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYT 834
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
LI +K AE+ F + +++ ++ + L+ Y G + + + M
Sbjct: 835 ILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAK 894
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
++ +++ K + +K+ + ++ +G + +I+ CR S+
Sbjct: 895 DIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEV 954
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
KV +++++G + + S++V + K G++ A ++ M P+ N L+++
Sbjct: 955 LKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINV 1014
Query: 479 HGRAKNLRQVEKLWKEM 495
+ + K+M
Sbjct: 1015 EQDSTDSENAGDFLKQM 1031
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%), Gaps = 3/204 (1%)
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+W + Y ++ + TY +INA+ R + +++ EM++KG +V Y+
Sbjct: 220 FW---RFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNV 276
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ + G + +A L M KG +V+ Y+ L+D G+ K + + + +EM +
Sbjct: 277 VIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKG 336
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P V+YT +I + R + + E G ++ +V K +E+
Sbjct: 337 LKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKAD 396
Query: 560 KLLQDMKSEGTKLDERLYHSAMNA 583
LL +M G K D + Y++ +
Sbjct: 397 ALLNEMIMVGIKPDTQTYNNMIEG 420
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 208/470 (44%), Gaps = 4/470 (0%)
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA 185
Y + W IV+L E+ + V PD T S ++A+C R A + G +
Sbjct: 134 YGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVP 193
Query: 186 -LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
++ +N+ + + K Y + V ++M+ +G D+ Y ++ Y + G E+ A
Sbjct: 194 CVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCL 253
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
S+ L F+ Y + + GR EAL F MK+ G + + + Y +
Sbjct: 254 DTMTSKGLLPNTFT---YNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGML 310
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ E+ +E G + ++ + + G+ + V+ MK+ +++S
Sbjct: 311 GKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSR 370
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++ + + A K+Y+++IS G P TY +++N R +S A+ + +
Sbjct: 371 DTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSK 430
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M + GF +YS ++ Y K G + ++ P+ I +L+ + + +
Sbjct: 431 MLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRR 490
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
L VEK ++E++ + PD V + ++++ Y + + + ++ + +G D
Sbjct: 491 LEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNS 550
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
++ +++K ++ E K+L+ +KS K D Y++ +N GL +AQ
Sbjct: 551 LMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQ 600
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 147/335 (43%), Gaps = 3/335 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV-KLAEELFKEA 320
Y + +L ++GR AL+ F +++ +G++ Y ++ + + L +E
Sbjct: 92 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 151
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRG 379
G+ D ++ +GL+++ + E +K A+ + ++ A++ F K
Sbjct: 152 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLK-ARGHVPCVVTYNALLQVFGKAGN 210
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
Y A++V +++ GC P VTY + Y R + +A K M KG Y++
Sbjct: 211 YTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNT 270
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ Y GR+ +A+ L +MK G PNV YN + M G+ + ++ +EM R
Sbjct: 271 VMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 330
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
TP++V++ T+++ + D + N + G + R ++ + +
Sbjct: 331 CTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAF 390
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
K+ +M S G Y++ +N L G AQ
Sbjct: 391 KMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQ 425
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 166/387 (42%), Gaps = 10/387 (2%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
+ P +T L+ L + ++ +++ + E+ P+ T + ++A C +
Sbjct: 296 YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVT 355
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+L + G E++ +N+ + Y + +Y++M S+G Y ++
Sbjct: 356 RVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVL 415
Query: 232 YKIGD---SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
+ GD ++ + + L+ + D + Y +L K G A +++
Sbjct: 416 SRQGDWSTAQSIVSKMLKNGFKPNDQS------YSLLLQCYAKGGNAAGIESIEKEVYVG 469
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
I I +L+ + ++ E+ F+E + +G D + ++ MY + GL K
Sbjct: 470 TIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKA 529
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
++ +S+K + L ++++ ++K W A K+ +QL S P V+Y ++IN
Sbjct: 530 TEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVING 589
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+C+ L +A+++ EM G CVV Y ++V Y +A +V M +P
Sbjct: 590 FCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPM 649
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y ++D + +AK + + E+
Sbjct: 650 ELTYRRVVDSYCKAKRYDEAREFLSEI 676
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/417 (19%), Positives = 173/417 (41%), Gaps = 4/417 (0%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T ++ + D ++L + K +P+ +T + + + +F +
Sbjct: 263 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 322
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ G + +N+ + K M V MKS G+ L Y ++ AY +
Sbjct: 323 LEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGR 382
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G ++ E S TP T Y L + L + G A M + G +
Sbjct: 383 CGSRTYAFKMYDEMISSGF--TPCLT-TYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPN 439
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y+ L+ +A E + KE + + LV+ + +E +
Sbjct: 440 DQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQ 499
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+K K I +++ ++K Y A ++++ + G P +TY S+++ Y +
Sbjct: 500 EVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSN 559
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+AEK+ +++ VV+Y++++ + K G I++A ++++M A G P V Y+
Sbjct: 560 ESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYH 619
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+L+ + + + ++ M + P +++Y V+ +Y +A+ +D +F +E
Sbjct: 620 TLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI 676
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR-AKNLRQVEKLW 492
V AY++++ + GR A+ L A+++ +G P + YN ++D++GR ++ ++ L
Sbjct: 89 VRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALL 148
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+EM V PD + +TVI+A R D V F+ + + G V ++ VF K
Sbjct: 149 EEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKA 208
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
E +++L++M+ G + D Y+ AG
Sbjct: 209 GNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGF 245
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR-AREFDM 522
G +V Y +++ RA + +L+ E+ R+ V P V+Y V+ Y R R +
Sbjct: 84 GSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPR 143
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
V E R G D A ++ + +++ V +D+K+ G
Sbjct: 144 IVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARG 190
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 206/492 (41%), Gaps = 47/492 (9%)
Query: 86 FLHGMLKDPQTQELAYDYYNEA----KKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSL 139
FL + Q++ L ++ ++A ++ P + L+ + + K + +++SL
Sbjct: 19 FLSSSQNNFQSKSLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSL 78
Query: 140 SEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA-FNSAMGGYNK 198
S+ + + PD +T + ++ S + A ++L + G A F + + G
Sbjct: 79 SKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCV 138
Query: 199 LHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFS 258
+ + V++KM G + Y +M CK R+L
Sbjct: 139 VGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGL---------------CKDRQLT----- 178
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
EAL F +M KGI D Y SLI + ++ E K L
Sbjct: 179 ------------------EALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLN 220
Query: 319 EAEEKGMLRDPEVCLKLVLMYI-EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E + ++ + V L +V+ + +EG V + DVV+ M ++ A+++G R
Sbjct: 221 EMVKSKIMPN-VVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLR 279
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
AVKV++ ++ GC+ V+Y ++IN YC+I KA +F EM ++ + Y
Sbjct: 280 SEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTY 339
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
S+++ GR++DA+ L +M A G PN+ Y+ L+D + L + L K +E
Sbjct: 340 STLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEG 399
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ PD Y I RA + + ++ G D IM+ K ++E
Sbjct: 400 SNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDE 459
Query: 558 LVKLLQDMKSEG 569
KL ++M G
Sbjct: 460 ASKLFREMDENG 471
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 145/359 (40%), Gaps = 35/359 (9%)
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L S+ K L + M GI D +I SF + V A + + + G
Sbjct: 62 LLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLG 121
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
D LV G + + LDV + M + + ++NG K R A+
Sbjct: 122 HQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEAL 181
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
++ ++I++G P TY S+I+A C + + + EM + VV+ + +V
Sbjct: 182 NLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDAL 241
Query: 445 GKTGRIRDAMWLVAKMKAKGCEP-----------------------------------NV 469
K G++ +A +V M G EP NV
Sbjct: 242 CKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNV 301
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
YN+L++ + + + + + L++EM R+++ P+ ++Y+T+I + +NE
Sbjct: 302 VSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNE 361
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G + + I++ K ++ E + LL+ ++ D ++Y+ A++ + AG
Sbjct: 362 MVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAG 420
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 155/374 (41%), Gaps = 10/374 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNE--AKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
P+ + + ++G+ KD Q E A + ++E AK + P+ T LI L +W
Sbjct: 159 PNVVTYGTLMNGLCKDRQLTE-ALNLFSEMIAKGI---SPDIFTYNSLIHALCNLCEWKH 214
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMG 194
+ +L + ++P+ + + +V + + K A+ ++ + I G E ++ + + M
Sbjct: 215 VTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMD 274
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
G+ + V++ M G V + Y ++ Y KI +K LF E ++L
Sbjct: 275 GHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQEL-- 332
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
P +T Y L L GR +A+ F +M G + + Y+ L+ + A
Sbjct: 333 IP-NTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAM 391
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
L K E + D +V + G +E D+ ++ L+ ++ G
Sbjct: 392 ALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGL 451
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
KR A K++ ++ GC+ TY +I + S+A ++ EM +GF V
Sbjct: 452 CKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADV 511
Query: 435 VAYSSMVAMYGKTG 448
+ +V M G
Sbjct: 512 STTALLVKMLSDDG 525
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 89/223 (39%), Gaps = 4/223 (1%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
LI + ++ D + L E+ ++P+ T S L+ + + A L + G
Sbjct: 307 LINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACG 366
Query: 183 EIALLAFNSAMGGY-NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+I L S + Y K H + + + ++ + + D Y ++ + GD E
Sbjct: 367 QIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAAR 426
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF R L ++ + I+ L K G EA K FR+M E G L + Y ++
Sbjct: 427 DLFSNLAPRGLQPDVWT---HNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTIT 483
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
+ A +L +E +G D LV M ++GL
Sbjct: 484 QGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGL 526
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 164/340 (48%), Gaps = 5/340 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++E M AG+ Y ++ Y K G ++ ALF K + + Y L +
Sbjct: 52 IFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLT---YNTLIN 108
Query: 268 SLGKSG-RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ K R + + F +MK+ G+ + Y ++ + ++ A ++ KE + L
Sbjct: 109 ACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCL 168
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+ ++ G +++ +++ E MK + +++ +++ Y A+ +
Sbjct: 169 PNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCL 228
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ + +GCIP TY ++I+ R L+++AE VF+EMQ+KG V Y++M+ Y K
Sbjct: 229 FVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSK 288
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
R A L+ MK GC P++W YN L+D G+A + + +++ E++ +P+ VS
Sbjct: 289 WSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVS 348
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVID-RAIAGIM 545
++ +I+ Y R F+ + + E R G V + A G+M
Sbjct: 349 FSALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLM 388
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 146/304 (48%), Gaps = 5/304 (1%)
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
LG+ G+ A + F M + G+ Y +L+ +A +K A LF+ +EKG
Sbjct: 40 LGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGC--S 97
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVV---ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
P V L+ + D+V E MK A ++ +D +VN + A +
Sbjct: 98 PNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQ 157
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+ +++ + C+P ++Y ++IN+ R +A ++F EM++ G Y+S++ Y
Sbjct: 158 ILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYA 217
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+ GR AM L M+ +GC P+++ YN+++DM GR + E ++ EM+R+ TPD+V
Sbjct: 218 REGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRV 277
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y T++ AY++ + G D I++ K E +++ ++
Sbjct: 278 TYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHEL 337
Query: 566 KSEG 569
K+ G
Sbjct: 338 KAAG 341
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 148/325 (45%), Gaps = 3/325 (0%)
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
G +A + +F ++ E + E + ++I ++ LA E+F+ + G+
Sbjct: 8 GARRQALQVFRFLQEHLEYELKEHNCV--TIISILGREGKLGLAREIFEGMSKAGVAPSV 65
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYE 388
L+ Y ++GL+++ + E+MK + ++N +KR V ++E
Sbjct: 66 HAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFE 125
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ G P +TY ++NA ++L+ A ++ EM+ V++Y++M+ G++G
Sbjct: 126 EMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSG 185
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
R+ +A+ L +MK G PN W YNSL+ + R + L+ ME PD +Y
Sbjct: 186 RLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYN 245
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
TVI R F + E + G DR M+ +SK S+ LL+ MK
Sbjct: 246 TVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRA 305
Query: 569 GTKLDERLYHSAMNALRDAGLQMQA 593
G D Y+ ++A AG +A
Sbjct: 306 GCTPDLWTYNILLDAAGKAGSASEA 330
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 152/335 (45%), Gaps = 5/335 (1%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--CSFASITEVKLAEE 315
S H Y L K G EA F MKEKG + Y +LI C+ + L
Sbjct: 64 SVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVG- 122
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGF 374
LF+E ++ G+ + +V + L + +++ MK + + IS ++N
Sbjct: 123 LFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNC-LPNVISYTTMINSL 181
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+ AV+++E++ G P TY S++ AY R Y KA +F+ M+ +G +
Sbjct: 182 GRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDL 241
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
Y++++ M G+ G +A + +M+ KGC P+ YN+++D + + + L K
Sbjct: 242 YTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKT 301
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+R TPD +Y ++ A +A ++ ++E + G + ++ ++ +L
Sbjct: 302 MKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGY 361
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
EE + +M++ G + Y MN+ G+
Sbjct: 362 FEEAERAWVEMRATGCVPNATAYCGLMNSYSHHGM 396
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 114/237 (48%), Gaps = 3/237 (1%)
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+LK +C++ + G + G A +++E + G P Y ++++ Y + L +A
Sbjct: 27 ELKEHNCVTIISILGREGKLGL--AREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEA 84
Query: 419 EKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
+F M++KG V+ Y++++ A + R+ D + L +MK G +PN YN +++
Sbjct: 85 WALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVN 144
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
++ KEM+ P+ +SYTT+I++ R+ D V+ + E + G
Sbjct: 145 ACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSP 204
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ ++ +++ + E+ + L M+ EG D Y++ ++ GL +A+
Sbjct: 205 NSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAE 261
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 144/344 (41%), Gaps = 13/344 (3%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV-QSKKWDS 135
P + + L G K +E A+ + EA K P T LI ++ +
Sbjct: 62 APSVHAYTALLSGYAKQGLLKE-AWALF-EAMKEKGCSPNVLTYNTLINACTKRAYRLPD 119
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQ----VFITDGEIALLAFNS 191
+V L E+ K V P+ T + +V +CV F A+ +L+ V I+ +
Sbjct: 120 LVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMIN 179
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
++G +L + ++E+MK G +S Y +++AY + G EK LF+ +
Sbjct: 180 SLGRSGRLD---EAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMED-- 234
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
+ + Y + D G+ G EA F +M+ KG D Y +++ +++ +
Sbjct: 235 -EGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRG 293
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A +L K + G D L+ + G + + + +K A + A++
Sbjct: 294 RARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALI 353
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
N + + + A + + ++ + GC+P Y ++N+Y +Y
Sbjct: 354 NMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLMNSYSHHGMY 397
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/438 (20%), Positives = 199/438 (45%), Gaps = 21/438 (4%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTI 206
++LP A + +ASC G I L+ + + G+ K
Sbjct: 112 HLLPAAELLRKALASC------------------PGCITPLSASVVVDGFCKAGRMDDAR 153
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
+ ++M G+ L++ CY +++ Y + + +VA + E +S ++ T Y IL
Sbjct: 154 RLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPT---VGTYTILV 210
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
D L +G + F ++K K + D Y+++I ++ V+ A E+F E G+
Sbjct: 211 DGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIE 270
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+ L+ + + G +E ++ M+ + + I +++G+ + A+++
Sbjct: 271 PNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEI 330
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ G TY ++ CR+ A+K+ M + G + V+Y+++++++ K
Sbjct: 331 KAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSK 390
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G + +A L M+ KG P+V YN ++D + ++ ++R+ E+ KEME++ + PD +
Sbjct: 391 EGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYT 450
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y ++ + + D+ ++ + E + G + ++ +K + EE + +M
Sbjct: 451 YAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNML 510
Query: 567 SEGTKLDERLYHSAMNAL 584
+ G D+ LY + +L
Sbjct: 511 AAGLTPDDTLYSMLVGSL 528
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 155/351 (44%), Gaps = 42/351 (11%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V ++M+S G+ G Y +++ GD KV ++F E K + + + Y + +
Sbjct: 190 VLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAG---DVYFYSAVIN 246
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ ++G A + F + GI + Y +LI F I +++ AE L + + +G+
Sbjct: 247 AYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGH 306
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS----DCISCAIV------------ 371
+ + ++ Y G+V+K L++ M+ +++ + ++C +
Sbjct: 307 NQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLL 366
Query: 372 -----NGF--------------SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
NG SK A +++ + +G P VTY +I+ Y +
Sbjct: 367 HIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKS 426
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+AE+ EM++KG V Y+++V + G++ A+ L +MK +G +PNV Y
Sbjct: 427 GSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAY 486
Query: 473 NSLMDMHGRAKNLRQVE--KLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
+L+ G AK R E + + M +TPD Y+ ++ + + + D
Sbjct: 487 TALIS--GLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKD 535
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 141/348 (40%), Gaps = 40/348 (11%)
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
TP S ++ D K+GR +A + +M G+ + Y L+ ++
Sbjct: 132 TPLSA---SVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVA 188
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E+ KE E G+ +P V +L V+G
Sbjct: 189 EVLKEMESGGV--EPTVGTYTIL---------------------------------VDGL 213
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVT-YASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
S V+++ I + + G V Y+++INAYCR +A +VF E G +
Sbjct: 214 STAGDISKVESVFDE-IKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPN 272
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
Y +++ + K G+I A L+ M+ +G N I+N+++D + R + + ++
Sbjct: 273 ERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKA 332
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
MER + D +Y T+ R + K + NG + ++ + SK
Sbjct: 333 VMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEG 392
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ E +L +DM+ +G++ Y+ ++ +G +A+ ++ E
Sbjct: 393 DMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEME 440
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 121/264 (45%)
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+ + G ++ +++ M +K++ C +++ +++++ +V +++ S G P
Sbjct: 143 FCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPT 202
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
TY +++ SK E VF E+++K V YS+++ Y + G +R A +
Sbjct: 203 VGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFD 262
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+ G EPN Y +L++ + + E L +M+ R V +++ + T+I Y R
Sbjct: 263 ECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHG 322
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
D ++ G +D + +++++E+ KLL M G + + Y
Sbjct: 323 MVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYT 382
Query: 579 SAMNALRDAGLQMQAQWLQQNFEG 602
+ ++ G ++A+ L ++ EG
Sbjct: 383 TLISIHSKEGDMVEARRLFRDMEG 406
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 204/479 (42%), Gaps = 46/479 (9%)
Query: 117 KSTLKLLIRYLVQSKKWDSIVSLSE----DFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
+S + L++ L S W+ L E +F N+ D + +V R ++ IA+
Sbjct: 163 ESDITGLLKGLDLSGNWERAFLLFEWVWLNFGSENMKVDDQSVEFMVKMLGRESQYSIAS 222
Query: 173 TLLQVF-ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L + + + + + A + + Y + Y I ++EKMK G+ Y +++ Y
Sbjct: 223 KLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVY 282
Query: 232 YKIGDS-EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K+G + + L E +S+ L+ F+ C G+ G EA +FF D+K G
Sbjct: 283 GKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISAC---GREGILDEARRFFDDLKLNGY 339
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
+ Y S++ F A + KE E+ D +LV Y+ G ++
Sbjct: 340 KPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAA 399
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
V+++M S+G +P +TY ++INAY
Sbjct: 400 VIDTMA-----------------------------------SKGVMPNAITYTTVINAYG 424
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ KA +VF +M++ G V Y++++ + GK R D + ++ MK GC P+
Sbjct: 425 KAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRI 484
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR-AREFDMCVKFYNE 529
+N+++ + G + V ++ +EM+ PDK ++ T+ISAY R E D+ K Y E
Sbjct: 485 TWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDV-AKMYGE 543
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G ++ ++ + ++ DM+ +G K +E Y ++ AG
Sbjct: 544 MVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAG 602
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/464 (21%), Positives = 194/464 (41%), Gaps = 78/464 (16%)
Query: 109 KLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKF 168
KL ++P +T +++ ++ + +++ ++ + N PDA T + LVA+ VRA
Sbjct: 335 KLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAG-- 392
Query: 169 KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
F +G V + M S G++ ++ Y ++
Sbjct: 393 ---------FHDEGAA-----------------------VIDTMASKGVMPNAITYTTVI 420
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
AY K GD++K +F + K +L P + Y + LGK R+ + +K DMK
Sbjct: 421 NAYGKAGDADKALEVFGQMK--ELGCVP-NVCTYNNVLVLLGKRSRSEDMIKILCDMKLN 477
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G D + +++ + K ++ +E + G D E L+ Y G
Sbjct: 478 GCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAY---GRCGSE 534
Query: 349 LDVVESMKN-AKLKISDCISC--AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+DV + + CI+ A++N ++R + AA V + +G P + +Y+ +
Sbjct: 535 VDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLL 594
Query: 406 INAYCRIALYSKAEKV-----------------------------------FIEMQQKGF 430
++ Y + EKV F ++Q G+
Sbjct: 595 LHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGY 654
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+V +SM++M+ + ++ A ++ + G +PN+ YNSL+D++ R + + E+
Sbjct: 655 KLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEE 714
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+ K+++ ++PD VSY TVI + + ++ +E NG
Sbjct: 715 MLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANG 758
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/503 (20%), Positives = 214/503 (42%), Gaps = 46/503 (9%)
Query: 144 KIYNVLP------DAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
K+++++P D C+ ++ + R K+K A + + G + L+ +N + Y
Sbjct: 223 KLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVY 282
Query: 197 NKLHMYYSTIL-VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K+ +S IL + ++M+S G+ D ++ A + G ++ F KL+
Sbjct: 283 GKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFF---DDLKLNGY 339
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
T Y + GK+G EAL ++M++ D Y L+ ++
Sbjct: 340 KPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAA 399
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC---------- 365
+ KG++ + ++ Y + G +K L+V MK + C
Sbjct: 400 VIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLG 459
Query: 366 ----------ISCAI-VNGFSKRRGYWAAV------KVYEQLISQ--------GCIPGQV 400
I C + +NG R W + K ++ +SQ G P +
Sbjct: 460 KRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKE 519
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
T+ ++I+AY R K++ EM GF C+ Y++++ + G + A +V M
Sbjct: 520 TFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDM 579
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ KG +PN Y+ L+ + +A N+R +EK+ E+ V P + T++ + R+
Sbjct: 580 RKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQL 639
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ +++ + NG +D + M+ +F + ++E+ ++L + G + + Y+S
Sbjct: 640 KGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSL 699
Query: 581 MNALRDAGLQMQAQWLQQNFEGT 603
++ G +A+ + ++ + +
Sbjct: 700 IDLYARVGDCWKAEEMLKDIQNS 722
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 153/324 (47%), Gaps = 3/324 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V +MK+ G D + ++ AY + G VA ++ E + TP T Y L +
Sbjct: 505 VLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGF--TPCIT-TYNALLN 561
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+L + G A DM++KG + + Y+ L+ ++ V+ E++ E + +
Sbjct: 562 ALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFP 621
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ LVL + ++ ++N K+ + ++++ F + + A ++
Sbjct: 622 SWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEML 681
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + G P VTY S+I+ Y R+ KAE++ ++Q G VV+Y++++ + K
Sbjct: 682 DVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKK 741
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G +++A+ ++++M A G +P +N+ M + + +++ + M P++++Y
Sbjct: 742 GLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTY 801
Query: 508 TTVISAYNRAREFDMCVKFYNEFR 531
VI Y +A++ + F ++ +
Sbjct: 802 KIVIDGYIKAKKHKEAMDFVSKIK 825
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/374 (18%), Positives = 162/374 (43%), Gaps = 4/374 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T ++ L + + + ++ + D K+ PD T + ++A C K K + +
Sbjct: 446 PNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQV 505
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ G E FN+ + Y + +Y +M +AG Y ++ A +
Sbjct: 506 LREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALAR 565
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G+ + ++ L+ + + S Y +L K+G K ++ + +
Sbjct: 566 RGNWKAAESVVLDMRKKGFKPNETS---YSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPS 622
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ +L+ + ++K E F + + G D V ++ M++ +EK ++++
Sbjct: 623 WMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLD 682
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+ + L+ + ++++ +++ W A ++ + + + G P V+Y ++I +C+
Sbjct: 683 VIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKG 742
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
L +A ++ EM G C + +++ ++ Y G +A ++ M GC PN Y
Sbjct: 743 LVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYK 802
Query: 474 SLMDMHGRAKNLRQ 487
++D + +AK ++
Sbjct: 803 IVIDGYIKAKKHKE 816
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 179/413 (43%), Gaps = 8/413 (1%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
A+NS + + K + VY M +G+ D+ + +M A+ K + V LF E
Sbjct: 91 AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+++ + Y IL D++ K G +ALK F DMK +G + Y S+I
Sbjct: 151 QNQNCSPNVIT---YSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKS 207
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
V A LF+E +G++ V L+ G + + M + L+
Sbjct: 208 GHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTF 267
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++V G A +++++ GC Y +I+ C+ +A ++F E+++
Sbjct: 268 TSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEE 327
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G V +++++ K+GRI DA L+ MK GC P+V +YN+L+D ++ + +
Sbjct: 328 DGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEE 387
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+L EM+ PD V+Y T+I + + ++ + E G I+ G
Sbjct: 388 AGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYNTILNG 447
Query: 548 VFSKLSQIEELVKLLQDMKSEGT----KLDERLYHSAMNALRDAGLQMQAQWL 596
+ +++E KL MK E D Y + +N R AGL A L
Sbjct: 448 L-CMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 202/461 (43%), Gaps = 57/461 (12%)
Query: 67 LNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRY 126
L R H+ A+ A ++S + +K TQ+ Y + RP+ T +L+
Sbjct: 77 LKRMEGHRCALT-ASAYNSLIDAFVKAGYTQKALAVYRVMGQS--GLRPDTYTFNVLMNA 133
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI---TDG- 182
++K+ DS+ L E+ + N P+ T S L+ + + + A L+VF+ + G
Sbjct: 134 FKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKA---LKVFLDMKSRGC 190
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ + S + G K ++E+M S G+V Y ++ + G ++ A
Sbjct: 191 RPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAK 250
Query: 243 LFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
LF E S+ L D F++ +Y LG +GRA EA + F++ ++ G D ++Y L
Sbjct: 251 LFREMLSKGLQPDHVTFTSLVY-----GLGVAGRASEARRIFQEARDVGCALDVNLYNVL 305
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
I + + A E+F E EE G++ D L+ + G + ++ MK A
Sbjct: 306 IDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRA-- 363
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
GC P Y ++I+ + +A +
Sbjct: 364 ---------------------------------GCTPDVTVYNTLIDGLRKSGRVEEAGQ 390
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+ +EMQ G++ VV Y++++ K GRI DA+ L ++ AKG N YN++++
Sbjct: 391 LLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLC 449
Query: 481 RAKNLRQVEKLWKEMERRKV----TPDKVSYTTVISAYNRA 517
A + + KL+ M++ V PD V+YTT+++ +A
Sbjct: 450 MAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQA 490
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 148/303 (48%), Gaps = 1/303 (0%)
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
K + IL+ P I+ L +AS ++ + E K E L+ +++ G
Sbjct: 47 KSRYILQ-PRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYT 105
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+K L V M + L+ ++N F K + + K++E++ +Q C P +TY+ +
Sbjct: 106 QKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSIL 165
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
I+A C+ KA KVF++M+ +G + Y+SM+ GK+G + A +L +M ++G
Sbjct: 166 IDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGL 225
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
+YNSL+ GR+ KL++EM + + PD V++T+++ A +
Sbjct: 226 VATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARR 285
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
+ E R G +D + +++ K +++E ++ +++ +G D +++ M+ L
Sbjct: 286 IFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLC 345
Query: 586 DAG 588
+G
Sbjct: 346 KSG 348
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 140/340 (41%), Gaps = 35/340 (10%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y L D+ K+G +AL +R M + G+ D + L+ +F V +L
Sbjct: 87 LTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKL 146
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F+E + + C V+ Y +++ K
Sbjct: 147 FEEMQNQN-------CSPNVITY----------------------------SILIDAVCK 171
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
G A+KV+ + S+GC P TY S+I+ + KA +F EM +G V
Sbjct: 172 CGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVV 231
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y+S++ G++GR A L +M +KG +P+ + SL+ G A + ++++E
Sbjct: 232 YNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEAR 291
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
D Y +I +++ D + + E +G V D ++ K +I
Sbjct: 292 DVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIH 351
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ LL DMK G D +Y++ ++ LR +G +A L
Sbjct: 352 DAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQL 391
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 105/228 (46%), Gaps = 8/228 (3%)
Query: 378 RGYWAA------VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
RGY +A V+ +++ C Y S+I+A+ + KA V+ M Q G
Sbjct: 62 RGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLR 121
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMW-LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
++ ++ + K R+ D++W L +M+ + C PNV Y+ L+D + + + K
Sbjct: 122 PDTYTFNVLMNAFKKAKRV-DSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALK 180
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
++ +M+ R P+ +YT++I ++ D + E G V R + ++
Sbjct: 181 VFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLG 240
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+ + + KL ++M S+G + D + S + L AG +A+ + Q
Sbjct: 241 RSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQ 288
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/549 (22%), Positives = 217/549 (39%), Gaps = 61/549 (11%)
Query: 108 KKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
++ +P ST+ L+ + + K +++SLS + + P+ +T L+ S
Sbjct: 50 NRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHL 109
Query: 166 RKFKIANTLLQVFITDGEIALLA-FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
+ A ++L + G A F + + G + +++KM G D Y
Sbjct: 110 NRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTY 169
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
++ K+G++ L + F+ Y + DSL K + EA F +
Sbjct: 170 GTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA---YNTIIDSLCKDRQVTEAFNLFSE 226
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M KGI D Y SLI + ++ E K L E + ++ D +V +EG
Sbjct: 227 MVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGK 286
Query: 345 VEKTLDVVESM------------------------KNAKLKISDCISC-----------A 369
V + DVV+ M + +K+ D + C
Sbjct: 287 VTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNT 346
Query: 370 IVNGFSKRR-------------------GYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
++NG+ K + AVKV++ ++ +GC+P ++Y ++IN YC
Sbjct: 347 LINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYC 406
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+I KA +F EM ++ V YS+++ R++DA+ L +M A PN+
Sbjct: 407 KIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLV 466
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
Y L+D + + L + L K +E + PD I RA E + ++
Sbjct: 467 TYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNL 526
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA-LRDAGL 589
G D IM+ + ++E KL ++M G L+ +Y++ LR+
Sbjct: 527 SSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNET 586
Query: 590 QMQAQWLQQ 598
Q LQ+
Sbjct: 587 SRAIQLLQE 595
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 93/488 (19%), Positives = 194/488 (39%), Gaps = 57/488 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ +++ + + KD Q E A++ ++E P+ T LI L +W +
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTE-AFNLFSEMVT-KGISPDIFTYNSLIHALCNLCEWKHVA 256
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+L + ++PD + + +V + + K A+ ++ I G E ++ + + M G+
Sbjct: 257 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGH 316
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
L + V++ M G + + Y ++ Y CK +++D
Sbjct: 317 CLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGY---------------CKIQRIDKAI 361
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
T + C L EA+K F M KG + + Y +LI + I + A L
Sbjct: 362 HYTXLMDXXCCYLNMD----EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYL 417
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F E + ++ D L+ GL VE +++A
Sbjct: 418 FGEMCRQELIPDTVTYSTLI-----HGLCH-----VERLQDA------------------ 449
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ ++ ++++ IP VTY +++ C+ ++A + ++ D +
Sbjct: 450 -------IALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQV 502
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
+ + + G + A L + + +KG +P+VW Y+ +++ R L + KL++EM+
Sbjct: 503 NNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMD 562
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
T + Y T+ + R E ++ E G D + + V + S +
Sbjct: 563 ENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQ 622
Query: 557 ELVKLLQD 564
L ++L++
Sbjct: 623 SLKQILRN 630
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/506 (22%), Positives = 209/506 (41%), Gaps = 39/506 (7%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P S L+ +V+ + + +SL + + P T + L+ A +L
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L + G + L+ FN+ + G+ M + + + + + G + D Y ++ K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G + AAL L + K P + MY L D L K G +AL + E+GIL D
Sbjct: 173 NGQIK--AALHLLQEMEKSSVQP-NLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLD 229
Query: 294 PSIYASLI---CSFASITEVK--------------------LAEELFKEA---EEKGML- 326
Y SLI CS EV L + L KE E +G+L
Sbjct: 230 AVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLA 289
Query: 327 ------RDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
P++ LM Y V + ++ M L+ +++G+ K +
Sbjct: 290 MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A+ ++++L ++ +P +Y S+I+ C S +K+ EM VV Y+
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
++ K GRI +A+ ++ M KG +PN+ YN++MD + N+ + ++ M +
Sbjct: 410 ILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKS 469
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ PD ++Y +I+ Y + D + + E R + D A ++ L +I +
Sbjct: 470 GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHV 529
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNAL 584
+LL +M G D Y+ ++A
Sbjct: 530 QELLDEMCDSGQSPDVITYNILLDAF 555
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 181/441 (41%), Gaps = 40/441 (9%)
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFN 190
+W + L NV PD +T + L+ + + + A +L + GE ++ +N
Sbjct: 245 RWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYN 304
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ M GY + ++ +M G+ D Y +++ Y K ++ LF E ++
Sbjct: 305 ALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK 364
Query: 251 KLDST--------------------------------PFSTHMYKILCDSLGKSGRAFEA 278
L T P Y IL D+L K GR EA
Sbjct: 365 NLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEA 424
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
L M +KG+ + Y +++ + V +A+++F + G+ +P++ VL+
Sbjct: 425 LGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGL--EPDILNYNVLI 482
Query: 339 --YIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGC 395
Y + +V++ + + + M++ L I D S ++++G ++ +++ G
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNL-IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQ 541
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P +TY +++A+C+ + KA +F ++ + G ++V K +++ A
Sbjct: 542 SPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAED 600
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
+ + GC PNV Y L++ + + + L +ME PD +++ +I
Sbjct: 601 ALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLL 660
Query: 516 RAREFDMCVKFYNEFRMNGGV 536
+ E D K E G V
Sbjct: 661 QRNETDKAEKLREEMIARGLV 681
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 148/373 (39%), Gaps = 35/373 (9%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P T ++ L ++ + G A+ F ++ KGI + + LI + + A
Sbjct: 52 PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFS 111
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L + G + ++ + G++ K LD +++ ++NG S
Sbjct: 112 LLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K AA+ + +++ P V Y+++I+ C+ S A + ++ ++G V
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231
Query: 436 AYSS-----------------------------------MVAMYGKTGRIRDAMWLVAKM 460
Y+S ++ K GRI +A ++A M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+G +P++ YN+LM+ + +N+ + +L+ M +R + PD ++Y +I Y + +
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
D + + E V A ++ +I + KLL +M D Y+
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411
Query: 581 MNALRDAGLQMQA 593
++AL G ++A
Sbjct: 412 IDALCKEGRILEA 424
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/254 (17%), Positives = 101/254 (39%), Gaps = 35/254 (13%)
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
R AV + +++ P + ++ A R+ Y A +F ++Q KG + +
Sbjct: 34 RNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATF 93
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD-------------------- 477
+ ++ Y A L+A + G +PN+ +N++++
Sbjct: 94 TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 478 -------------MHGRAKN--LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
++G +KN ++ L +EME+ V P+ V Y+ +I +
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ ++ G ++D ++ + + +E+ +LL M E D+ ++ ++
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273
Query: 583 ALRDAGLQMQAQWL 596
AL G ++AQ +
Sbjct: 274 ALCKEGRILEAQGV 287
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/390 (18%), Positives = 152/390 (38%), Gaps = 11/390 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ + G E A + +N K P+ +LI ++K D +
Sbjct: 298 PDIVTYNALMEGYCSRENVHE-ARELFNRMVKR-GLEPDVLNYNVLIDGYCKTKMVDEAM 355
Query: 138 SLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
L ++ N++P + + L+ C R + L ++ + ++ +N +
Sbjct: 356 VLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDAL 415
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K + V M G+ + Y +M+ Y + +F L+
Sbjct: 416 CKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDI 475
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y +L + K+ EA+ F++M+ K ++ D + Y SLI ++ + +EL
Sbjct: 476 LN---YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532
Query: 317 FKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E + G + P+V +L+ + + +K + + + + + AIV+
Sbjct: 533 LDEMCDSG--QSPDVITYNILLDAFCKTQPFDKAISLFRQIVEG-IWPDFYTNHAIVDNL 589
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A + L+ GC P TY +INA C+ + +A + +M+
Sbjct: 590 CKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDA 649
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+ + ++ + + A L +M A+G
Sbjct: 650 ITFEIIIGVLLQRNETDKAEKLREEMIARG 679
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 208/470 (44%), Gaps = 4/470 (0%)
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA 185
Y + W IV+L E+ + V PD T S ++A+C R A + G +
Sbjct: 225 YGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVP 284
Query: 186 -LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
++ +N+ + + K Y + V ++M+ +G D+ Y ++ Y + G E+ A
Sbjct: 285 CVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCL 344
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
S+ L F+ Y + + GR EAL F MK+ G + + + Y +
Sbjct: 345 DTMTSKGLLPNTFT---YNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGML 401
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ E+ +E G + ++ + + G+ + V+ MK+ +++S
Sbjct: 402 GKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSR 461
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++ + + A K+Y+++IS G P TY +++N R +S A+ + +
Sbjct: 462 DTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSK 521
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M + GF +YS ++ Y K G + ++ P+ I +L+ + + +
Sbjct: 522 MLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRR 581
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
L VEK ++E++ + PD V + ++++ Y + + + ++ + +G D
Sbjct: 582 LEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNS 641
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
++ +++K ++ E K+L+ +KS K D Y++ +N GL +AQ
Sbjct: 642 LMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQ 691
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 147/335 (43%), Gaps = 3/335 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV-KLAEELFKEA 320
Y + +L ++GR AL+ F +++ +G++ Y ++ + + L +E
Sbjct: 183 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 242
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRG 379
G+ D ++ +GL+++ + E +K A+ + ++ A++ F K
Sbjct: 243 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLK-ARGHVPCVVTYNALLQVFGKAGN 301
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
Y A++V +++ GC P VTY + Y R + +A K M KG Y++
Sbjct: 302 YTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNT 361
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ Y GR+ +A+ L +MK G PNV YN + M G+ + ++ +EM R
Sbjct: 362 VMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 421
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
TP++V++ T+++ + D + N + G + R ++ + +
Sbjct: 422 CTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAF 481
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
K+ +M S G Y++ +N L G AQ
Sbjct: 482 KMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQ 516
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 166/387 (42%), Gaps = 10/387 (2%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
+ P +T L+ L + ++ +++ + E+ P+ T + ++A C +
Sbjct: 387 YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVT 446
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+L + G E++ +N+ + Y + +Y++M S+G Y ++
Sbjct: 447 RVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVL 506
Query: 232 YKIGD---SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
+ GD ++ + + L+ + D + Y +L K G A +++
Sbjct: 507 SRQGDWSTAQSIVSKMLKNGFKPNDQS------YSLLLQCYAKGGNAAGIESIEKEVYVG 560
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
I I +L+ + ++ E+ F+E + +G D + ++ MY + GL K
Sbjct: 561 TIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKA 620
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
++ +S+K + L ++++ ++K W A K+ +QL S P V+Y ++IN
Sbjct: 621 TEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVING 680
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+C+ L +A+++ EM G CVV Y ++V Y +A +V M +P
Sbjct: 681 FCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPM 740
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y ++D + +AK + + E+
Sbjct: 741 ELTYRRVVDSYCKAKRYDEAREFLSEI 767
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/417 (19%), Positives = 173/417 (41%), Gaps = 4/417 (0%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T ++ + D ++L + K +P+ +T + + + +F +
Sbjct: 354 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 413
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ G + +N+ + K M V MKS G+ L Y ++ AY +
Sbjct: 414 LEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGR 473
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G ++ E S TP T Y L + L + G A M + G +
Sbjct: 474 CGSRTYAFKMYDEMISSGF--TPCLT-TYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPN 530
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y+ L+ +A E + KE + + LV+ + +E +
Sbjct: 531 DQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQ 590
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+K K I +++ ++K Y A ++++ + G P +TY S+++ Y +
Sbjct: 591 EVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSN 650
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+AEK+ +++ VV+Y++++ + K G I++A ++++M A G P V Y+
Sbjct: 651 ESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYH 710
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+L+ + + + ++ M + P +++Y V+ +Y +A+ +D +F +E
Sbjct: 711 TLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI 767
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR-AKNLRQVEKLW 492
V AY++++ + GR A+ L A+++ +G P + YN ++D++GR ++ ++ L
Sbjct: 180 VRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALL 239
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+EM V PD + +TVI+A R D V F+ + + G V ++ VF K
Sbjct: 240 EEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKA 299
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
E +++L++M+ G + D Y+ AG
Sbjct: 300 GNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGF 336
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR-AREFDM 522
G +V Y +++ RA + +L+ E+ R+ V P V+Y V+ Y R R +
Sbjct: 175 GSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPR 234
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
V E R G D A ++ + +++ V +D+K+ G
Sbjct: 235 IVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARG 281
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 172/373 (46%), Gaps = 3/373 (0%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
++ +G+ + + ++ G +E+ A+F E + L T Y L K
Sbjct: 297 VQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQP---RTRAYNALLRGYVK 353
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+G +A +M+ G+L + Y+ LI ++ + + A + KE E + + V
Sbjct: 354 AGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYV 413
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
+++ Y ++G +KT V+ M+++ ++ +++ F K A+ +++++
Sbjct: 414 FSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRML 473
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
S+G P +T+ ++++ +C+ + +AE++F EM +KG+ C ++ M+ +G R
Sbjct: 474 SEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWD 533
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
D L+ M+++G PN Y +L+D++G++ + +M+ + P Y ++
Sbjct: 534 DVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALL 593
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+AY + D V + R +G ++ F K + E +LQ MK K
Sbjct: 594 NAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLK 653
Query: 572 LDERLYHSAMNAL 584
D Y + M AL
Sbjct: 654 PDVVTYTTLMKAL 666
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 171/385 (44%), Gaps = 5/385 (1%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKI--GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+M+ G D Y I+ + K +S + ++ E KL+ ++ +
Sbjct: 224 RMREDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLE---VDVQLWNDIIVG 280
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
K+G +AL+F ++ G+ + ++I + + AE +F+E + G+
Sbjct: 281 FAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPR 340
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ Y++ GL+ VV M+ + + ++ +++ + + +A V +
Sbjct: 341 TRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLK 400
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ + P ++ I+ +Y + K +V EM+ G + Y+ ++ +GK
Sbjct: 401 EMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFN 460
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ AM +M ++G EP+ +N+L+D H +A + E+L++EM + P ++
Sbjct: 461 CLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFN 520
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I+++ +D R G + + ++ ++ K + ++ ++ L DMK+
Sbjct: 521 IMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAA 580
Query: 569 GTKLDERLYHSAMNALRDAGLQMQA 593
G K +Y++ +NA GL QA
Sbjct: 581 GLKPSSTMYNALLNAYAQRGLSDQA 605
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 162/372 (43%), Gaps = 7/372 (1%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
A+N+ + GY K + V +M+ +G++ + Y +++AY G++E+ + +
Sbjct: 343 AYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAY---GNAERWESARIVL 399
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
K + + + +++ + S G + + R+M++ G+ D Y LI +F
Sbjct: 400 KEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKF 459
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+ A F +G+ D LV + + G ++ ++ E M +
Sbjct: 460 NCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTF 519
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++N F + + + + SQG +P VTY ++I+ Y + + A + +M+
Sbjct: 520 NIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKA 579
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G Y++++ Y + G A+ M+ G +P++ NSL++ G K+ R
Sbjct: 580 AGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFG--KDRRD 637
Query: 488 VEK--LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
VE + + M+ + PD V+YTT++ A +FD Y E ++G DR ++
Sbjct: 638 VEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKVPSVYEEMILSGCTPDRKARAML 697
Query: 546 VGVFSKLSQIEE 557
+ Q E
Sbjct: 698 RSALKYMKQTLE 709
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 152/342 (44%), Gaps = 15/342 (4%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y IL +LG+S + +EA F K+ P Y +LI + A +++ A L
Sbjct: 171 LYSILIHALGQSEKLYEA--FLLSQKQNLT---PLTYNALISACARNNDIEKALNLICRM 225
Query: 321 EEKGMLRDPEVCLKLVLMYI------EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E G D V L++ + +++K + + KL++ + I+ GF
Sbjct: 226 REDGYPSD-LVNYSLIIRSLMKNNRANSSILQK---IYREIDRDKLEVDVQLWNDIIVGF 281
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+K A++ + G T ++I +AE +F EM+ G
Sbjct: 282 AKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRT 341
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
AY++++ Y K G +RDA ++V++M+ G PN Y+ L+D +G A+ + KE
Sbjct: 342 RAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKE 401
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
ME V P+ ++ ++++Y E+ + E +G DR +++ F K +
Sbjct: 402 MEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNC 461
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ + M SEG + D +++ ++ AG +A+ L
Sbjct: 462 LDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEEL 503
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 149/340 (43%), Gaps = 7/340 (2%)
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ +G SEK+ FL S+K + TP + Y L + ++ +AL M+E G
Sbjct: 177 HALGQSEKLYEAFL--LSQKQNLTPLT---YNALISACARNNDIEKALNLICRMREDGYP 231
Query: 292 EDPSIYASLICSFASITEVK--LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
D Y+ +I S + +++++E + + D ++ +++ + + G ++K L
Sbjct: 232 SDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKAL 291
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+ + ++ + L + ++ G A ++E++ G P Y +++ Y
Sbjct: 292 EFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGY 351
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ L AE V EM++ G YS ++ YG R A ++ +M+A +PN
Sbjct: 352 VKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNA 411
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
++++ ++ + ++ ++ +EME V PD++ Y +I + + D + ++
Sbjct: 412 YVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDR 471
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
G D +V K + + +L ++M +G
Sbjct: 472 MLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKG 511
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/209 (18%), Positives = 96/209 (45%), Gaps = 7/209 (3%)
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
C ++ Y+ +I+A + K + F+ Q++ + Y+++++ + I A+
Sbjct: 165 CFSYELLYSILIHA---LGQSEKLYEAFLLSQKQNL--TPLTYNALISACARNNDIEKAL 219
Query: 455 WLVAKMKAKGCEPNVWIYNSLMD--MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
L+ +M+ G ++ Y+ ++ M N ++K+++E++R K+ D + +I
Sbjct: 220 NLICRMREDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIV 279
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ +A + D ++F + +G + A ++ + EE + ++M+ G +
Sbjct: 280 GFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQP 339
Query: 573 DERLYHSAMNALRDAGLQMQAQWLQQNFE 601
R Y++ + AGL A+++ E
Sbjct: 340 RTRAYNALLRGYVKAGLLRDAEFVVSEME 368
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 208/470 (44%), Gaps = 4/470 (0%)
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA 185
Y + W IV+L E+ + V PD T S ++A+C R A + G +
Sbjct: 225 YGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVP 284
Query: 186 -LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
++ +N+ + + K Y + V ++M+ +G D+ Y ++ Y + G E+ A
Sbjct: 285 CVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCL 344
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
S+ L F+ Y + + GR EAL F MK+ G + + + Y +
Sbjct: 345 DTMTSKGLLPNTFT---YNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGML 401
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ E+ +E G + ++ + + G+ + V+ MK+ +++S
Sbjct: 402 GKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSR 461
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++ + + A K+Y+++IS G P TY +++N R +S A+ + +
Sbjct: 462 DTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSK 521
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M + GF +YS ++ Y K G + ++ P+ I +L+ + + +
Sbjct: 522 MLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRR 581
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
L VEK ++E++ + PD V + ++++ Y + + + ++ + +G D
Sbjct: 582 LEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNS 641
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
++ +++K ++ E K+L+ +KS K D Y++ +N GL +AQ
Sbjct: 642 LMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQ 691
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 147/335 (43%), Gaps = 3/335 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV-KLAEELFKEA 320
Y + +L ++GR AL+ F +++ +G++ Y ++ + + L +E
Sbjct: 183 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 242
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRG 379
G+ D ++ +GL+++ + E +K A+ + ++ A++ F K
Sbjct: 243 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLK-ARGHVPCVVTYNALLQVFGKAGN 301
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
Y A++V +++ GC P VTY + Y R + +A K M KG Y++
Sbjct: 302 YTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNT 361
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ Y GR+ +A+ L +MK G PNV YN + M G+ + ++ +EM R
Sbjct: 362 VMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 421
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
TP++V++ T+++ + D + N + G + R ++ + +
Sbjct: 422 CTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAF 481
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
K+ +M S G Y++ +N L G AQ
Sbjct: 482 KMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQ 516
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 166/387 (42%), Gaps = 10/387 (2%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
+ P +T L+ L + ++ +++ + E+ P+ T + ++A C +
Sbjct: 387 YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVT 446
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+L + G E++ +N+ + Y + +Y++M S+G Y ++
Sbjct: 447 RVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVL 506
Query: 232 YKIGD---SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
+ GD ++ + + L+ + D + Y +L K G A +++
Sbjct: 507 SRQGDWSTAQSIVSKMLKNGFKPNDQS------YSLLLQCYAKGGNAAGIESIEKEVYVG 560
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
I I +L+ + ++ E+ F+E + +G D + ++ MY + GL K
Sbjct: 561 TIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKA 620
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
++ +S+K + L ++++ ++K W A K+ +QL S P V+Y ++IN
Sbjct: 621 TEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVING 680
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+C+ L +A+++ EM G CVV Y ++V Y +A +V M +P
Sbjct: 681 FCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPM 740
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y ++D + +AK + + E+
Sbjct: 741 ELTYRRVVDSYCKAKRYDEAREFLSEI 767
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/417 (19%), Positives = 173/417 (41%), Gaps = 4/417 (0%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T ++ + D ++L + K +P+ +T + + + +F +
Sbjct: 354 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 413
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ G + +N+ + K M V MKS G+ L Y ++ AY +
Sbjct: 414 LEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGR 473
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G ++ E S TP T Y L + L + G A M + G +
Sbjct: 474 CGSRTYAFKMYDEMISSGF--TPCLT-TYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPN 530
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y+ L+ +A E + KE + + LV+ + +E +
Sbjct: 531 DQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQ 590
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+K K I +++ ++K Y A ++++ + G P +TY S+++ Y +
Sbjct: 591 EVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSN 650
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+AEK+ +++ VV+Y++++ + K G I++A ++++M A G P V Y+
Sbjct: 651 ESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYH 710
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+L+ + + + ++ M + P +++Y V+ +Y +A+ +D +F +E
Sbjct: 711 TLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI 767
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR-AKNLRQVEKLW 492
V AY++++ + GR A+ L A+++ +G P + YN ++D++GR ++ ++ L
Sbjct: 180 VRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALL 239
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+EM V PD + +TVI+A R D V F+ + + G V ++ VF K
Sbjct: 240 EEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKA 299
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
E +++L++M+ G + D Y+ AG
Sbjct: 300 GNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGF 336
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR-AREFDM 522
G +V Y +++ RA + +L+ E+ R+ V P V+Y V+ Y R R +
Sbjct: 175 GSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPR 234
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
V E R G D A ++ + +++ V +D+K+ G
Sbjct: 235 IVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARG 281
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/496 (22%), Positives = 204/496 (41%), Gaps = 38/496 (7%)
Query: 108 KKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
++ +P ST+ L+ + + K +++SLS + + P+ +T L+ S
Sbjct: 50 NRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHL 109
Query: 166 RKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
+ KI GE LH++ +KM G D Y
Sbjct: 110 NRGKI-----------GE--------------ALHLF-------DKMIGEGFRPDVVTYG 137
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
++ K+G++ L + F+ Y + DSL K + EA F +M
Sbjct: 138 TLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA---YNTIIDSLCKDRQVTEAFNLFSEM 194
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
KGI D Y SLI + ++ E K L E + ++ D +V +EG V
Sbjct: 195 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 254
Query: 346 EKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+ DVV+ M + + IS ++NG+ K + A+ ++ ++ Q IP VTY++
Sbjct: 255 TEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYST 314
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I+ C + A +F EM +V Y ++ K + +AM L+ ++
Sbjct: 315 LIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSN 374
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+P++ + N +D RA L L+ + + + PD +Y+ +I+ R D
Sbjct: 375 LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEAS 434
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
K + E NG ++ I + F + ++ ++LLQ+M + G D + L
Sbjct: 435 KLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 494
Query: 585 RDAGLQMQAQWLQQNF 600
D GL + + ++F
Sbjct: 495 SDDGLDQSLKQILRDF 510
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 107/269 (39%), Gaps = 5/269 (1%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+PD F++ + + K+ + E A+D ++ + P + LI + ++ D
Sbjct: 235 MPDVVSFNTVVDALCKEGKVTE-AHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKA 293
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
+ L + ++PD T S L+ + + A L + +I L + Y
Sbjct: 294 MYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 353
Query: 197 NKLHMYYSTILVYEK-MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ Y + + K ++ + + D ++ + G+ E LF S+ L
Sbjct: 354 LCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 413
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
++ Y I+ + L + G EA K FR+M E G + IY ++ F E A +
Sbjct: 414 VWT---YSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQ 470
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
L +E +G D V M ++GL
Sbjct: 471 LLQEMVARGFSADASTMTLFVKMLSDDGL 499
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/215 (17%), Positives = 87/215 (40%), Gaps = 2/215 (0%)
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+ + +++ P V + ++ + ++ +S + +M G + ++
Sbjct: 44 GAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILI 103
Query: 442 AMYG--KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
+ G+I +A+ L KM +G P+V Y +L++ + N +L M ++
Sbjct: 104 NSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN 163
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
P+ +Y T+I + + R+ ++E G D ++ L + + +
Sbjct: 164 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVA 223
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
LL +M D +++ ++AL G +A
Sbjct: 224 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAH 258
>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 211/492 (42%), Gaps = 56/492 (11%)
Query: 85 SFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFK 144
+FL L + ++A Y K+L P T + I+ L + ++ V + + +
Sbjct: 196 NFLMNRLIEHGKIDMAVAIYRHLKRLG-LNPNDYTYGIFIKALCRKGNFEEAVDVFREME 254
Query: 145 IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF-ITDGEIALLAFNSAMGGYNKLHMYY 203
V P+A TCS + ++ + L+ + I A+ + + G+
Sbjct: 255 EAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLK 314
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL----------- 252
V+ M + GI D Y ++ AY K G+ + AL + S +
Sbjct: 315 EAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEF 374
Query: 253 -DSTPFSTH-MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
DS F +Y I+ D+L K G+ EA++ +MK + + D Y +LI + ++
Sbjct: 375 RDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKL 434
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD------ 364
A+ +F+E +E+G+ D LV + GL ++ L++++ + LK +
Sbjct: 435 VDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRI 494
Query: 365 ----CIS---------------------CAIVNGFSKRRGYWAAVKVYEQLISQGCI--- 396
C++ A+V+G+ K A +++ +L QG +
Sbjct: 495 IEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRML 554
Query: 397 -----PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
P Q+ Y +I A+CR +A+ VF + ++G V+ Y+ M+ Y + +R
Sbjct: 555 ALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLR 614
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+A + MK +G +P+V Y ++D H + NL+ L+ EM R + PD V+YT ++
Sbjct: 615 EARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALL 674
Query: 512 SAYNR--AREFD 521
+R FD
Sbjct: 675 PGKCNFGSRHFD 686
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/444 (18%), Positives = 182/444 (40%), Gaps = 66/444 (14%)
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMY-KI 264
+ +Y +K G+ + Y ++A + G+ E+ +F E + ++ + Y +
Sbjct: 212 VAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEG 271
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
LC S +S +EAL R ++ D Y ++I F S ++K AE++F + +G
Sbjct: 272 LC-SHKRSDLGYEAL---RALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEG 327
Query: 325 MLRDPEVCLKLVLMY----------------IEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ D + L+ Y + G+ +D + +++ + + + +
Sbjct: 328 IAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYN 387
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+V+ K AV++ ++ + V Y ++I YC A+ +F EM+++
Sbjct: 388 IVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKER 447
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN--------------- 473
G + +V Y+ +V + + G ++A+ L+ + +G +PN +N
Sbjct: 448 GIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEA 507
Query: 474 ----------------SLMDMHGRAKNLRQVEKLWKEMERR--------KVTPDKVSYTT 509
+++D + +A R+ +L+ + ++ V P+++ Y
Sbjct: 508 EAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGK 567
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+I A+ R + ++ G D +M+ + +++ + E + DMK G
Sbjct: 568 LIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERG 627
Query: 570 TKLDERLY------HSAMNALRDA 587
K D Y HS N L+DA
Sbjct: 628 IKPDVITYTVVLDGHSKTNNLQDA 651
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 126/291 (43%), Gaps = 21/291 (7%)
Query: 153 HTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKM 212
H + + C++ + N ++ E ++ +N +GG+++ + + + + +
Sbjct: 420 HYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCI 479
Query: 213 KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKS 272
+ G+ +S + +I+E G ++ A + + L++ Y + D K+
Sbjct: 480 GTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN-------YSAMVDGYCKA 532
Query: 273 GRAFEALKFFRDMKEKGILE------DPS--IYASLICSFASITEVKLAEELFKEAEEKG 324
+A + F + ++GIL +P+ +Y LI +F ++K A+ +F E+G
Sbjct: 533 NFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERG 592
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ D ++ Y + + D+ MK +K +++G SK A+
Sbjct: 593 ITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAI 652
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIA------LYSKAEKVFIEMQQKG 429
+Y+++I++G P VTY +++ C + + K+FI Q +G
Sbjct: 653 NLYDEMIARGLQPDIVTYTALLPGKCNFGSRHFDNQWLEEPKLFILAQPRG 703
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 106/269 (39%), Gaps = 21/269 (7%)
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA-IVNGFSKRRGYWAAVKVYEQLISQ 393
LV Y+ G+ ++ +D + K + +SC ++N + AV +Y L
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGF-VPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRL 221
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G P TY I A CR + +A VF EM++ G + V S+ + R
Sbjct: 222 GLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLG 281
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ ++A + + Y +++ L++ E ++ +M + PD Y +I A
Sbjct: 282 YEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHA 341
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
Y +A V +N+ NG + LV ++ + G LD
Sbjct: 342 YCKAGNLLQAVALHNDMVSNGIKTN-------------------LVDQFKEFRDSGIFLD 382
Query: 574 ERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
E LY+ ++AL G +A L +G
Sbjct: 383 EVLYNIVVDALCKLGKVEEAVELLNEMKG 411
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/471 (21%), Positives = 208/471 (44%), Gaps = 7/471 (1%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
E RP + L+R L ++ V L D + V PD T L+ A A
Sbjct: 108 ETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKA 167
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
LL+ G E ++ ++ + GY K + V+E+M GI D Y ++++
Sbjct: 168 VELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDS 227
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
+ G +K + + R L+ + Y +L +S+ K G EA+ +M EKG+
Sbjct: 228 LCREGKVKKATQVMDKMMERGLEPNVVT---YNVLINSMCKEGSVKEAMSLRNNMLEKGV 284
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKT 348
D Y +LI + + E+ A L +E + +P V ++ + G + +
Sbjct: 285 ALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQA 344
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
V + M + ++ G + A+++ +++ S G P TY+ +IN
Sbjct: 345 FQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILING 404
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+C++ +AE + +M++ G + +V Y ++A + G + A +M K C+ +
Sbjct: 405 FCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMH-KNCKLD 463
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
V Y++++ R ++ + E+ K M + PD V+Y+ +I+ + + + +
Sbjct: 464 VVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLK 523
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ +G V D A+ ++ + E++++L+++M ++ LD ++ +
Sbjct: 524 QMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIIST 574
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 164/383 (42%), Gaps = 13/383 (3%)
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFE 277
V D+ Y ++ A + G A L + + T S Y L +L R +
Sbjct: 75 VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVS---YTTLMRALCAERRTGQ 131
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
A+ RDM+ G+ D Y +LI +V A EL +E E G+ +P V + L
Sbjct: 132 AVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGI--EPNVVVYSCL 189
Query: 338 M--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ Y + G E V E M ++ + +++ + A +V ++++ +G
Sbjct: 190 LQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGL 249
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P VTY +IN+ C+ +A + M +KG V Y++++ + +AM
Sbjct: 250 EPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMG 309
Query: 456 LVAKM--KAKGCEPNVWIYNSLMDMHGRAKN--LRQVEKLWKEMERRKVTPDKVSYTTVI 511
L+ +M EPNV +NS+ +HG K +RQ ++ M + V++ +I
Sbjct: 310 LLEEMIHGETMVEPNVVTFNSV--IHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLI 367
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
R + ++ +E +G D I++ F K+ Q++ LL M+ +G +
Sbjct: 368 GGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIE 427
Query: 572 LDERLYHSAMNALRDAGLQMQAQ 594
+ Y + AL + G+ QA+
Sbjct: 428 PELVHYIPLLAALCEQGMMEQAR 450
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 193/462 (41%), Gaps = 16/462 (3%)
Query: 136 IVSLSEDFKIYNVLPDAHTC----SRLVASCVRARKFKIANTLLQVFITDGEIALLAFNS 191
+V L E + + LP + L A C + A LL+V + +++ +
Sbjct: 59 LVPLPESPALLSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTT 118
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-CKSR 250
M + + M+++G+ D Y ++ D +K L E C+S
Sbjct: 119 LMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCES- 177
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ +Y L K+GR K F +M +GI D +Y LI S +V
Sbjct: 178 ---GIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKV 234
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISC 368
K A ++ + E+G+ +P V VL+ +EG V++ + + +M + +
Sbjct: 235 KKATQVMDKMMERGL--EPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYN 292
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCI--PGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
++ G S A+ + E++I + P VT+ S+I+ C+ +A +V M
Sbjct: 293 TLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMA 352
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+ G +V ++ ++ + +++ AM L+ +M + G EP+ + Y+ L++ + +
Sbjct: 353 ENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVD 412
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ E L +M R + P+ V Y +++A + F++E N +D M+
Sbjct: 413 RAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCK-LDVVAYSTMI 471
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+L + + L+ M EG D Y +N ++G
Sbjct: 472 HGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSG 513
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 89/201 (44%)
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
V+Y +++ A CR A + + V+Y++++ R A+ L+
Sbjct: 79 VSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRD 138
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M+A G P+V Y +L+ A ++ + +L +EM + P+ V Y+ ++ Y +A
Sbjct: 139 MQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGR 198
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
++ K + E G D + ++ + ++++ +++ M G + + Y+
Sbjct: 199 WECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNV 258
Query: 580 AMNALRDAGLQMQAQWLQQNF 600
+N++ G +A L+ N
Sbjct: 259 LINSMCKEGSVKEAMSLRNNM 279
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 193/427 (45%), Gaps = 6/427 (1%)
Query: 145 IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYY 203
+ V P+A T + + A++ K A LQ+ G FN+ + G+ +
Sbjct: 241 VEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVH 300
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYK 263
I V++ MK G V D Y +++ K GD + +E + S Y
Sbjct: 301 KAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVS---YS 357
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
L L ++GR A + F+ +K++G D +Y+ ++ ++++ +L+ +
Sbjct: 358 SLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHH 417
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWA 382
+ D L+ Y +++ L+V E M + + + ++C I V+GFS
Sbjct: 418 NFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGI-CPNVVTCTILVHGFSNEGLIGE 476
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A +++ G +P TY II+ C++ + +F +M ++G+ V YS ++
Sbjct: 477 AFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIID 536
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ K +++A L KM +G +PN++ Y SL++ L +V L+K M + P
Sbjct: 537 GFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAP 596
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D++ YT++I+ Y + ++ + E G D + ++G FSK+ ++ +
Sbjct: 597 DRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFM 656
Query: 563 QDMKSEG 569
++M ++G
Sbjct: 657 EEMMNKG 663
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 150/353 (42%), Gaps = 6/353 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + S LHG+ + + ELA++ + K F+ + +++ Q +
Sbjct: 351 PNLVSYSSLLHGLCRAGRV-ELAFELFKRLKD-QGFKHDHIVYSIVLHGCCQHLDLEICY 408
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
L D +N +PDA+ S L+ + R R+ K A + ++ ++DG ++ + G+
Sbjct: 409 DLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGF 468
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + L +K++ G+V Y I+ K+ + +F + R P
Sbjct: 469 SNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGY--VP 526
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
T +Y I+ D K+ EA + + M ++G + Y SLI ++ L
Sbjct: 527 -DTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTL 585
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
FK +G+ D + L+ Y + ++ L++ M+ L + ++ GFSK
Sbjct: 586 FKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSK 645
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
A E+++++G P VTY +I Y +I KA ++ M Q G
Sbjct: 646 VLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAG 698
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/319 (19%), Positives = 134/319 (42%), Gaps = 4/319 (1%)
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
D G +G L G + P +YA++I F ++ + A + EA++ G+
Sbjct: 116 DHCGNAGPELFELVPMLASNLGGSMTLPQVYATVIRVFVELSMFEDALVTYVEAKKVGV- 174
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK--RRGYWAAV 384
+ +VC L+ +E + + + MK++ + +++ ++ + A+
Sbjct: 175 -ELQVCNFLLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEAL 233
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
++ ++ +G P TYA+ + C A + Q+G+ +++++ +
Sbjct: 234 ELLSEMEVEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGF 293
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
G++ A+ + MK G P+V Y+ L+D + ++ + EM R +TP+
Sbjct: 294 CHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNL 353
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
VSY++++ RA ++ + + + G D + I++ + +E L D
Sbjct: 354 VSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWND 413
Query: 565 MKSEGTKLDERLYHSAMNA 583
M D Y S + A
Sbjct: 414 MVHHNFVPDAYNYSSLIYA 432
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 4/190 (2%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
YA++I + ++++ A ++E ++ G + V + ++ + +I A L M
Sbjct: 145 VYATVIRVFVELSMFEDALVTYVEAKKVGVELQVCNF--LLKRLVEGNQIMYARSLFDDM 202
Query: 461 KAKGCEPNVWIYNSLMDM--HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
K+ G PNV+ Y+ LM M HG L + +L EME V P+ +Y T + A+
Sbjct: 203 KSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHAK 262
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ F G + ++ F Q+ + +++ MK G D Y
Sbjct: 263 QVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYS 322
Query: 579 SAMNALRDAG 588
++ L G
Sbjct: 323 ILVDGLCKQG 332
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/485 (21%), Positives = 218/485 (44%), Gaps = 22/485 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +++R L D V+L + + V PD T S L+ + + A L
Sbjct: 156 PNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDL 215
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKM-KSAGIVLDSGCYCQIMEAYY 232
L G + ++ +N+ +GG K + + V++K+ K G + Y +++
Sbjct: 216 LDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLC 275
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K G ++V ++ + L + Y IL L +SG A + + ++ + G++
Sbjct: 276 KFGRFKEVGEVWERMVANNLQPDVIT---YGILIHGLCRSGDVDGAARVYSEIIKTGLVI 332
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGM--LRDPEVCLKLVLMYIEEGLVEKTLD 350
D ++Y SL+ F V+ A + + A G+ LR + +K + + G+V++ ++
Sbjct: 333 DAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLF---DSGMVDEAIE 389
Query: 351 VVESMKNAKLKISDCISCAIV------NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+ + ++ I D ++ + NGF+ + A ++E+ G +Y+S
Sbjct: 390 LWDLLEKDVACIPDTVTFGTLIHGLCQNGFANK-----AFTIFEEARVSGKQLDVFSYSS 444
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+IN C + A KV+ +M + G Y+++++ + + R DA+ + +KM G
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG 504
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
C P V YN+L+D +A+ ++ + +EM TPD +Y ++I ++ D +
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDAL 564
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS-EGTKLDERLYHSAMNA 583
+ + G +D + I++ +++E + + DMK + + Y++ M+
Sbjct: 565 SIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDG 624
Query: 584 LRDAG 588
L + G
Sbjct: 625 LYETG 629
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 108/514 (21%), Positives = 197/514 (38%), Gaps = 74/514 (14%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T L+ L + + D + L ++ V PD + L+ C +A +F+ +
Sbjct: 191 PDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRV 250
Query: 175 LQVFITD--GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+ D L +N + G K + V+E+M + + D Y ++
Sbjct: 251 WDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLC 310
Query: 233 KIGDSEKVAALFLE--------------------CKSRKL-------DSTPFST----HM 261
+ GD + A ++ E C++ ++ DS F+
Sbjct: 311 RSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRT 370
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGI--LEDPSIYASLICSFASITEVKLAEELFKE 319
Y I+ L SG EA++ + D+ EK + + D + +LI A +F+E
Sbjct: 371 YNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE 429
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
A G D ++ G + + V E M K + I A+++GF +
Sbjct: 430 ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYR 489
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
AV++Y ++ GC P +TY ++I+ C+ Y +A V EM + GF + Y S
Sbjct: 490 TSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS 549
Query: 440 MV---------------------------------AMYG--KTGRIRDAMWLVAKMKAK- 463
++ ++G G++ +A+ + + MK K
Sbjct: 550 LIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKK 609
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
C PN+ YN+LMD + + LW + + PD +SY T I
Sbjct: 610 NCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEG 669
Query: 524 VKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIE 556
++ +E ++ G+I I I+V K I+
Sbjct: 670 IQLLDEV-LSRGIIPTVITWNILVRAVIKYGPIQ 702
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 95/483 (19%), Positives = 198/483 (40%), Gaps = 61/483 (12%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ L G K + +++ +++ K P RP +T +++ L + ++ +
Sbjct: 226 PDVVCYNALLGGCFKAGEFEKVMR-VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVG 284
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA-------------------NTLLQVF 178
+ E N+ PD T L+ R+ A N+L++ F
Sbjct: 285 EVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGF 344
Query: 179 ITDGEI--ALLAFNSA-MGGYNKLHMY-------YSTILVYEKM-------KSAGIVLDS 221
G + A ++SA G L Y + + +V E + K + D+
Sbjct: 345 CQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDT 404
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECK--SRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
+ ++ + G + K +F E + ++LD +S+ M LC+ GR +A+
Sbjct: 405 VTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSS-MINGLCNV----GRLVDAV 459
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
K + M + G + IY +LI F + A ++ + + G C V+ Y
Sbjct: 460 KVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG-------CSPTVITY 512
Query: 340 --IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA------AVKVYEQLI 391
+ +GL K E+ A+ + + + I S RG ++ A+ +++Q++
Sbjct: 513 NTLIDGLC-KAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQIL 571
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK-GFDKCVVAYSSMVAMYGKTGRI 450
+G + + +I+ C +A VF +M++K +V Y++++ +TG I
Sbjct: 572 YKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYI 631
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
A L + G EP++ YN+ + + + +L E+ R + P +++ +
Sbjct: 632 DKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNIL 691
Query: 511 ISA 513
+ A
Sbjct: 692 VRA 694
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/129 (19%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER----RKVTPDKVSYTTVISAYNRARE 519
GC P + +N+L+D RA+ + + + R++ P+ +Y V+ + +
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
D V ++ R D ++ +K +++ + LL +M G + D Y++
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233
Query: 580 AMNALRDAG 588
+ AG
Sbjct: 234 LLGGCFKAG 242
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/514 (21%), Positives = 220/514 (42%), Gaps = 41/514 (7%)
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
EA + P+ T LI + ++ V L + K+ PD T + L+ ++
Sbjct: 253 EAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKS 312
Query: 166 RKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
R+ + A +LQ +G + +NS + Y K + + + +M GI D Y
Sbjct: 313 RRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTY 372
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
++ + K G + +FLE R + P + + L G G+ E +K F D
Sbjct: 373 TTLLSGFEKAGKDDFAIQVFLEM--RAVGCKP-NICTFNALIKMHGNRGKFAEMMKVFDD 429
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
+K D + +L+ F +FKE + G + + + L+ Y G
Sbjct: 430 IKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGS 489
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPGQVTYA 403
++ + V +SM A + + D + V R G W + KV ++ C P +++Y+
Sbjct: 490 FDQAMAVYKSMLEAGV-VPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYS 548
Query: 404 SIINAYC-----------------------------------RIALYSKAEKVFIEMQQK 428
S+++AY + L + E+ F+E++++
Sbjct: 549 SLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRR 608
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G + ++M+++YG+ + A ++ M P++ YNSLM M+ R++N ++
Sbjct: 609 GISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKS 668
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
E++ +E+ + + PD++SY TVI AY R + ++E + + V D +
Sbjct: 669 EEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIAT 728
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
++ S E + +++ M +G K D+ Y+S ++
Sbjct: 729 YAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVD 762
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 171/370 (46%), Gaps = 17/370 (4%)
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G + +V++ + + D + Y L ++ SGR +A+ F M++ G +
Sbjct: 168 LGKAGRVSSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGC--N 225
Query: 294 PS---------IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
P+ +Y + ++++T L + +G+ D L+ L
Sbjct: 226 PTLITYNVVLNVYGKMGMPWSNVTA------LVEAMRSRGVAPDLYTYNTLISCCRRGSL 279
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
E+ + + + MK A+++ F K R A+KV +++ + G P VTY S
Sbjct: 280 YEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNS 339
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I+AY + L +A + +M KG V Y+++++ + K G+ A+ + +M+A G
Sbjct: 340 LISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVG 399
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
C+PN+ +N+L+ MHG ++ K++ +++ +PD V++ T+++ + +
Sbjct: 400 CKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVS 459
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ E + G V +R ++ +S+ ++ + + + M G D Y++ + AL
Sbjct: 460 GIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAAL 519
Query: 585 RDAGLQMQAQ 594
GL Q++
Sbjct: 520 ARGGLWEQSE 529
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 175/374 (46%), Gaps = 8/374 (2%)
Query: 213 KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKS 272
++ G+ +D Y ++ AY G LF + + + T + Y ++ + GK
Sbjct: 185 QNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLIT---YNVVLNVYGKM 241
Query: 273 GRAFEALK-FFRDMKEKGILEDPSIYASLI--CSFASITEVKLAEELFKEAEEKGMLRDP 329
G + + M+ +G+ D Y +LI C S+ E A LF++ + +G D
Sbjct: 242 GMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEE--AVHLFQQMKLEGFTPDK 299
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
L+ ++ + ++ + V++ M+ + ++++ ++K A+ + Q
Sbjct: 300 VTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQ 359
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
++ +G P TY ++++ + + A +VF+EM+ G + +++++ M+G G+
Sbjct: 360 MVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGK 419
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ M + +K C P++ +N+L+ + G+ QV ++KEM+R ++ ++ T
Sbjct: 420 FAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNT 479
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ISAY+R FD + Y G V D + ++ ++ E+ K+L +M+
Sbjct: 480 LISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGR 539
Query: 570 TKLDERLYHSAMNA 583
K +E Y S ++A
Sbjct: 540 CKPNELSYSSLLHA 553
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 183/412 (44%), Gaps = 18/412 (4%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
H+ PD + + L G K + + A + E + + +P T LI+ K
Sbjct: 362 HKGIKPDVFTYTTLLSGFEKAGK-DDFAIQVFLEMRAV-GCKPNICTFNALIKMHGNRGK 419
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALL-AFNS 191
+ ++ + +D K+ N PD T + L+A + + + + G +A FN+
Sbjct: 420 FAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNT 479
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG---DSEKVAALFLE-- 246
+ Y++ + + VY+ M AG+V D Y ++ A + G SEKV A +
Sbjct: 480 LISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGR 539
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
CK +L + H Y +G+ E + F + G +E ++ + S
Sbjct: 540 CKPNELSYSSL-LHAYA--------NGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNS 590
Query: 307 ITEVKL-AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+++ + E F E +G+ D ++ +Y + +V K +++ M + S
Sbjct: 591 KSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLT 650
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
+++ +S+ + + ++ +++ +G P +++Y ++I AYCR +A ++F EM
Sbjct: 651 TYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEM 710
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
+ VV Y++ +A Y +A+ +V M +GC+P+ YNS++D
Sbjct: 711 KDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVD 762
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 146/317 (46%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L + L K + EA F +M KGI + Y SLI + E K L E
Sbjct: 153 YGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 212
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ ++ D +V +EG+V + DVV+ M + ++ + A+++G R
Sbjct: 213 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 272
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
AVKV++ ++ + C+ ++Y ++IN YC+I KA +F EM ++ V Y++++
Sbjct: 273 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 332
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
GR++DA+ L +M A+G P++ Y +L D + ++L + L K +E
Sbjct: 333 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 392
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD YTT++ RA E + ++ G + IM+ K + E KL
Sbjct: 393 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 452
Query: 562 LQDMKSEGTKLDERLYH 578
+M G ++ Y+
Sbjct: 453 FSEMNKNGCSPNDCTYN 469
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/500 (20%), Positives = 213/500 (42%), Gaps = 49/500 (9%)
Query: 95 QTQELAYDYYNEA----KKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNV 148
++ L ++ +EA ++ +P ST+ L+ + ++K +++SLS + +
Sbjct: 17 HSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGI 76
Query: 149 LPDAHTCSRLVASCVRARKFKIA-------------------NTLLQVFITDGEI--ALL 187
PD +T + ++ S + A TL++ +G+I AL
Sbjct: 77 PPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALH 136
Query: 188 AFNSAMG-GYNKLHMYYSTIL--------------VYEKMKSAGIVLDSGCYCQIMEAYY 232
F+ +G G+ + Y T++ ++ +M + GI + Y ++
Sbjct: 137 LFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLC 196
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K+ + + V L E K+ F+ + D+L K G EA M +G+
Sbjct: 197 KLCEWKHVTTLMNEMVDSKIMPDVFT---LNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 253
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ Y +L+ EV +A ++F K + + L+ Y + V+K + +
Sbjct: 254 NVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLF 313
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
E M +L + +++G A+ ++ +++++G IP VTY ++ + C+
Sbjct: 314 EEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKN 373
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
KA + ++ +D + Y++++ + G + DA L + + +KG +PNVW Y
Sbjct: 374 RHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTY 433
Query: 473 NSLMDMHGRAKN--LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
N + +HG K L + KL+ EM + +P+ +Y + + R E ++ E
Sbjct: 434 NIM--IHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEM 491
Query: 531 RMNGGVIDRAIAGIMVGVFS 550
G +D + ++VG+ S
Sbjct: 492 LARGFSVDVSTTTLLVGMLS 511
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%)
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M KGI D Y SLI + ++ E K L E ++ + V +V +EG+
Sbjct: 664 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGM 723
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+ DVV+ M ++ A+++G R AVKV++ ++ +GC+P +Y
Sbjct: 724 IAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNI 783
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+IN YC+I KA + +M +G V Y++++ GR++ A+ L +M A G
Sbjct: 784 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASG 843
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
P++ Y L+D + +L + L K +E + D + Y I RA E +
Sbjct: 844 QIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAAR 903
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
++ G D IM+ K ++E KL + M
Sbjct: 904 DLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 151/381 (39%), Gaps = 37/381 (9%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P ST + L S+ K+ L R M GI D A +I S + V A
Sbjct: 42 PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFS 101
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ + G D L+ EG + + L + + M + + ++NG
Sbjct: 102 ALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLC 161
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K R A ++ ++I++G P VTY S+I+ C++ + + EM V
Sbjct: 162 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVF 221
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH---------------- 479
+++V K G + +A +V M +G EPNV YN+LMD H
Sbjct: 222 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 281
Query: 480 -----------------GRAKNLRQVEK---LWKEMERRKVTPDKVSYTTVISAYNRARE 519
G K ++ V+K L++EM R+++TP+ V+Y T+I
Sbjct: 282 VHKDCVANVISYNTLINGYCK-IQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 340
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ ++E G + D + K +++ + LL+ ++ D ++Y +
Sbjct: 341 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 400
Query: 580 AMNALRDAGLQMQAQWLQQNF 600
++ + AG A+ L N
Sbjct: 401 ILDGMCRAGELEDARDLFSNL 421
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 143/346 (41%), Gaps = 9/346 (2%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D+T F+T L L G+ EAL F M +G + Y +LI +V
Sbjct: 114 DATTFTT-----LIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTE 168
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE--KTLDVVESMKNAKLKISDCISCAI 370
A +F E KG+ P + L++ L E ++ M ++K+ +
Sbjct: 169 AFNIFSEMITKGI--SPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 226
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
V+ K A V + +I +G P VTY ++++ +C A KVF M K
Sbjct: 227 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 286
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
V++Y++++ Y K + AM+L +M + PN YN+L+ L+
Sbjct: 287 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 346
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L+ EM R PD V+Y T+ + R D + + D I ++
Sbjct: 347 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 406
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ ++E+ L ++ S+G + + Y+ ++ L GL +A L
Sbjct: 407 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 452
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 104/522 (19%), Positives = 205/522 (39%), Gaps = 23/522 (4%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + + ++G+ KD Q E A++ ++E P T LI L + +W +
Sbjct: 148 PNVVTYGTLINGLCKDRQVTE-AFNIFSEMIT-KGISPNIVTYNSLIHGLCKLCEWKHVT 205
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+L + ++PD T + +V + + A+ ++ + I G E ++ +N+ M G+
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + V++ M V + Y ++ Y KI +K LF E ++L TP
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL--TP 323
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+T Y L L GR +A+ F +M +G + D Y +L + A L
Sbjct: 324 -NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 382
Query: 317 FKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
K E G DP++ + ++ G +E D+ ++ + L+ + +++G
Sbjct: 383 LKAIE--GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGL 440
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K+ A K++ ++ GC P TY I + R + ++ EM +GF V
Sbjct: 441 CKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDV 500
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA------------ 482
+ +V M G + ++ K + P+ SL + +
Sbjct: 501 STTTLLVGMLSDDGLDQSVKQILCK-PSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHF 559
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
L + M P V +T ++++ + + + + + G D
Sbjct: 560 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 619
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
I++ F L ++ +L + G + D Y + MN L
Sbjct: 620 NILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGL 661
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 182/413 (44%), Gaps = 29/413 (7%)
Query: 102 DYYNEAKKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
D + ++ P ST+ L+ + + K + +++SLS + + PD +T + L+
Sbjct: 564 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 623
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
S R+ A ++L + G + ++ + + M G K M + GI
Sbjct: 624 NSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGIS 670
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAF 276
D Y ++ A + + + V L E + K+ + FST + D+L K G
Sbjct: 671 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST-----VVDALCKEGMIA 725
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
A M ++G+ D Y +L+ +E+ A ++F KG + + L+
Sbjct: 726 IAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILI 785
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGC 395
Y + ++K + ++E M L I+D ++ +++G A+ ++ ++++ G
Sbjct: 786 NGYCQIQRMDKAMGLLEQMSLQGL-IADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQ 844
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
IP VTY +++ C+ ++A + ++ D ++ Y+ + + G + A
Sbjct: 845 IPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARD 904
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKN--LRQVEKLWKEMERRKVTPDKVS 506
L + + +KG +P+V YN + +HG K L + KL+++M+ + + S
Sbjct: 905 LFSNLSSKGLQPDVRTYNIM--IHGLCKRGLLDEANKLFRKMDENDIWSNSTS 955
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 110/549 (20%), Positives = 195/549 (35%), Gaps = 100/549 (18%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
LI + + D + L E+ + P+ T + L+ + + A +L + G
Sbjct: 296 LINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 355
Query: 183 EIALLAFNSAMGGY--NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
+I L + Y H+ + L+ + ++ + D Y I++ + G+ E
Sbjct: 356 QIPDLVTYRTLSDYLCKNRHLDKAMALL-KAIEGSNWDPDIQIYTTILDGMCRAGELEDA 414
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
LF S+ L ++ Y I+ L K G EA K F +M + G + Y +
Sbjct: 415 RDLFSNLSSKGLQPNVWT---YNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLI 471
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE-------------- 346
F E EL +E +G D LV M ++GL +
Sbjct: 472 TRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSR 531
Query: 347 ----------------------------KTLDVVESMKNAKLKISDCISCA----IVNGF 374
TLD S N L + S ++
Sbjct: 532 PSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSI 591
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+K + Y + + Q+ S G P T +IN++C + A V ++ + GF V
Sbjct: 592 AKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDV 651
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V Y ++ M G + KM KG P+++ YNSL+ + V L E
Sbjct: 652 VTYGTL--MNG-----------LCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNE 698
Query: 495 ME-----------------------------------RRKVTPDKVSYTTVISAYNRARE 519
M +R V PD V+YT ++ + E
Sbjct: 699 MVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE 758
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
D VK ++ G V + I++ + ++ ++++ + LL+ M +G D Y++
Sbjct: 759 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 818
Query: 580 AMNALRDAG 588
++ L G
Sbjct: 819 LIHGLCHVG 827
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%)
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++I++G P TY S+I+A C + + + EM VV +S++V K G
Sbjct: 663 KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 722
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
I A +V M +G EP+V Y +LMD H + + K++ M + P+ SY
Sbjct: 723 MIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN 782
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I+ Y + + D + + + G + D ++ + +++ + L +M +
Sbjct: 783 ILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS 842
Query: 569 GTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
G D Y ++ L +A L + EG+
Sbjct: 843 GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS 877
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 101/209 (48%), Gaps = 1/209 (0%)
Query: 381 WAAVK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
W V + ++++ +P V ++++++A C+ + + A V M ++G + VV Y++
Sbjct: 689 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 748
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ + + +A+ + M KGC PNV YN L++ + + + + + L ++M +
Sbjct: 749 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 808
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ D V+Y T+I + ++E +G + D I++ K + E +
Sbjct: 809 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 868
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAG 588
LL+ ++ D +Y+ A++ + AG
Sbjct: 869 VLLKAIEGSNLDADILVYNIAIDGMCRAG 897
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 172/373 (46%), Gaps = 3/373 (0%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
++ +G+ + + ++ A G + + A+F E + L T Y L K
Sbjct: 296 VQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKP---RTRAYNALLRGYVK 352
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+G +A +M+ G+ + Y+ LI ++ + + A + KE E + + V
Sbjct: 353 AGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYV 412
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
+++ Y ++G +K+ V+ M+N+ ++ +++ F K A+ +++++
Sbjct: 413 FSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRML 472
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
S+G P VT+ ++I+ +CR + +AE++F EM + G+ C ++ M+ +G R
Sbjct: 473 SEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWD 532
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
D L+A M+++G PN Y +L+D++G++ + +M+ + P Y +I
Sbjct: 533 DVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALI 592
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+AY + + V + R++G ++ F + + E +LQ MK K
Sbjct: 593 NAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLK 652
Query: 572 LDERLYHSAMNAL 584
D Y + M AL
Sbjct: 653 PDVVTYTTLMKAL 665
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 174/386 (45%), Gaps = 7/386 (1%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIG--DSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+M+ G D Y I+ + + DS + L+ E + KL+ + +
Sbjct: 223 RMRQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLE---LDVQLSNDIIVG 279
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
K+G +AL+F ++ G+ + ++I + + AE +F+E + G+
Sbjct: 280 FAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPR 339
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK-VY 387
L+ Y++ GL++ VV M+ + + ++ +++ + G W + + V
Sbjct: 340 TRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNA-GRWESARIVL 398
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++ + P ++ I+++Y + K+ +V EM+ G V Y+ M+ +GK
Sbjct: 399 KEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKF 458
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
+ AM +M ++G EP+ +N+L+D H RA + E+L++EM +P ++
Sbjct: 459 NCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTF 518
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+I+++ +D R G V + ++ ++ K + + ++ L DMK+
Sbjct: 519 NIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKA 578
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQA 593
G K +Y++ +NA GL QA
Sbjct: 579 AGLKPSSTMYNALINAYAQRGLSEQA 604
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 157/371 (42%), Gaps = 3/371 (0%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
A+N+ + GY K + V +M+ +G+ + Y +++AY G E + E
Sbjct: 342 AYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEM 401
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
++ + + +++ + S G ++ + R+M+ G+ D Y +I +F
Sbjct: 402 EASNVQP---NAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKF 458
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+ A F +G+ D L+ + G ++ ++ E M +
Sbjct: 459 NCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTF 518
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++N F + + + + SQG +P VTY ++I+ Y + ++ A + +M+
Sbjct: 519 NIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKA 578
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G Y++++ Y + G A+ M+ G +P++ NSL++ G + +
Sbjct: 579 AGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAE 638
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+ + M+ + PD V+YTT++ A R +FD Y E ++G DR ++
Sbjct: 639 AFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILSGCTPDRKARAMLRS 698
Query: 548 VFSKLSQIEEL 558
+ Q EL
Sbjct: 699 ALKYMKQTLEL 709
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 158/349 (45%), Gaps = 16/349 (4%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y IL +LG+S + +EA F ++ P Y +LI + A +++ A L
Sbjct: 170 LYSILIHALGQSEKLYEA--FLLSQRQNLT---PLTYNALISACARNNDLEKALNLITRM 224
Query: 321 EEKGMLRDPEVCLKLVLM------YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
+ G D V L++ ++ +++K +E KL++ +S I+ GF
Sbjct: 225 RQDGYPSD-FVNYSLIIRSLMRKNRVDSAILQKLYREIEC---DKLELDVQLSNDIIVGF 280
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+K A++ + G T ++I A +AE +F EM+ G
Sbjct: 281 AKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRT 340
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
AY++++ Y K G ++DA ++V++M+ G PN Y+ L+D +G A + KE
Sbjct: 341 RAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKE 400
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
ME V P+ ++ ++S+Y E+ + E +G DR +M+ F K +
Sbjct: 401 MEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNC 460
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL-QQNFEG 602
++ + M SEG + D +++ ++ AG +A+ L ++ EG
Sbjct: 461 LDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEG 509
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 137/316 (43%), Gaps = 4/316 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + T LI + +W+S + ++ + NV P+A+ SR+++S +++ + +
Sbjct: 373 PNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQV 432
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ G + +N + + K + + +++M S GI D+ + +++ + +
Sbjct: 433 LREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCR 492
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G ++ LF E +P +T + I+ +S G R + M+ +G++ +
Sbjct: 493 AGKHDRAEELFEEMMEGGY--SPCNT-TFNIMINSFGDQERWDDVKNLLAHMRSQGLVPN 549
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y +LI + A E + + G+ + L+ Y + GL E+ +
Sbjct: 550 SVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFR 609
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+M+ LK S +++N F + R A V + + P VTY +++ A R+
Sbjct: 610 AMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVE 669
Query: 414 LYSKAEKVFIEMQQKG 429
+ K V+ EM G
Sbjct: 670 KFDKVPSVYEEMILSG 685
>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 600
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 126/556 (22%), Positives = 227/556 (40%), Gaps = 20/556 (3%)
Query: 33 STC-KAFPFVTVNPSSIINHRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGML 91
S+C FP + SS N + F ++ S + T DS A FL M
Sbjct: 9 SSCVHGFPLLRYFASSS-NSKPFLLHPSHSSSTFSFVSDSDTSRA--------QFLDSM- 58
Query: 92 KDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPD 151
++ ++ ++A D+Y++ + F P LL + + K + + +SL + V P
Sbjct: 59 RNAKSVDVALDFYHKMVTMKPF-PCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPT 117
Query: 152 AHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYE 210
HT + ++ R ++L + G E +++ FN+ + G I +
Sbjct: 118 VHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVD 177
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDSTPFSTHMYKILCDS 268
+K G DS I K+G S + +E K+ LD T +S + D
Sbjct: 178 HLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSG-----VVDG 232
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L K G FEAL F M KGI D Y LI + K A L KG++ D
Sbjct: 233 LCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 292
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
+ + + + G++ + + M + ++ +I+ A++V++
Sbjct: 293 VQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFD 352
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+IS+GC+P VTY S+I+ +C +KA EM G D VV +S+++ K G
Sbjct: 353 LMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAG 412
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ A L M G PN+ ++D + + L++E+E+ + + Y
Sbjct: 413 KPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYN 472
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
++ + + + ++ ++ G ID IM+ K +++ LL M+
Sbjct: 473 IILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEEN 532
Query: 569 GTKLDERLYHSAMNAL 584
G +E Y+ + L
Sbjct: 533 GCPPNECTYNVFVQGL 548
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 138/367 (37%), Gaps = 38/367 (10%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
A++ + G K M + + ++ +M GI D Y ++ D K AA L
Sbjct: 225 AYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNF-DRWKEAAPLLAN 283
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
RK T + ++ K+G A F M GI D Y S+I + +
Sbjct: 284 MMRKGIMPDVQT--FNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCML 341
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++K A E+F KG L + L+ + E + K + + M N L +
Sbjct: 342 NQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTW 401
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++ G K AA +++ + G +P T A I++ + +S+A +F E+++
Sbjct: 402 STLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEK 461
Query: 428 -----------------------------------KGFDKCVVAYSSMVAMYGKTGRIRD 452
KG VV Y+ M+ K G + D
Sbjct: 462 MNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDD 521
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A L+ KM+ GC PN YN + R + + K M+ + D + +I+
Sbjct: 522 AEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLIN 581
Query: 513 AYNRARE 519
++ +E
Sbjct: 582 YFSANKE 588
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 210/489 (42%), Gaps = 34/489 (6%)
Query: 110 LPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFK 169
LP +P+ T L+R + + D ++ + N++P+ CS L+ +A++
Sbjct: 2 LPICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSI 61
Query: 170 IANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
A + G +A + + + + G K + + +M+ G + Y ++
Sbjct: 62 DALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLI 121
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
+ K + ++ LF KS ++ +P S Y L D L ++G+ A+ F++M
Sbjct: 122 DGLCKNNEPDRAQELFEHMKS--VECSP-SMVTYNTLLDGLFRTGKLERAMALFQEM--- 175
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
L+ S CS IT L + L K V +
Sbjct: 176 --LDRRSHDMDDRCSPNVITYSVLIDGLCKANR-----------------------VSQA 210
Query: 349 LDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
++++ESMK A+ D I+ I V+G K AA +V +++ GC+P VTY S+++
Sbjct: 211 VELLESMK-ARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLH 269
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
CR S A + +M +G VV Y +++ K GR++DA ++A M KG P
Sbjct: 270 GLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTP 329
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
++ IYN L++ +A + + L + + PD V+Y++VI R+ D +
Sbjct: 330 DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL 389
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
+ G D + ++ K +++E L + M +G D Y + ++ L A
Sbjct: 390 LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKA 449
Query: 588 GLQMQAQWL 596
G +A L
Sbjct: 450 GRVDEAHLL 458
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 116/523 (22%), Positives = 211/523 (40%), Gaps = 20/523 (3%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
V D + + L G+ K+ + + A +E + P T LI L ++ + D
Sbjct: 76 VADTVIYTALLSGLWKEKRLDQ-ALAILHEMRD-HGCEPNVVTYNSLIDGLCKNNEPDRA 133
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT------DGEIA--LLA 188
L E K P T + L+ R K + A L Q + D + ++
Sbjct: 134 QELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVIT 193
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
++ + G K + + + E MK+ G D Y +++ K KVAA + E
Sbjct: 194 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCK---ESKVAAAW-EVL 249
Query: 249 SRKLDSTPFSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
LD+ + Y L L ++ R +AL RDM +G + Y +LI +
Sbjct: 250 REMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKV 309
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
VK A + + +KG D + L+ + V++++ ++ + +K
Sbjct: 310 GRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTY 369
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+++ G + A ++ + S+GC P + Y+++I+ C+ +A ++ M
Sbjct: 370 SSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAG 429
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G D VV YS+++ K GR+ +A L+A+M G P+ YNSL+ +L +
Sbjct: 430 DGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDE 489
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR-----MNGGVIDRAIA 542
+L +EMER P V+Y +I R D V + + G +D
Sbjct: 490 AIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAY 549
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
++ K ++ E + Q+M G D Y + L+
Sbjct: 550 SSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLK 592
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/414 (20%), Positives = 170/414 (41%), Gaps = 13/414 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +LI L ++ + V L E K PD T + LV + K A +
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ + G + L+ +NS + G + + + M G + Y +++ K
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G + A+ + + TP +Y +L + L K+ + E++ R GI D
Sbjct: 309 VGRVKDACAMLADMIDKG--GTP-DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDV 351
Y+S+I + A L + +G P+V L L+ + G V++ D+
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGC--PPDVILYSTLIDGLCKAGKVDEAFDL 423
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
E M +++G K A + +++ G P +TY S+I C
Sbjct: 424 YEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCD 483
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK-----GCE 466
+ +A ++ EM++ V Y+ ++ + R+ A+ L+ + KA+ G
Sbjct: 484 LNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTA 543
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ Y+SL+D +A + + ++EM V PD ++Y+ ++ ++++
Sbjct: 544 LDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDL 597
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/438 (20%), Positives = 160/438 (36%), Gaps = 56/438 (12%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+EL + PD + + G+ K+ + A++ E P T L+
Sbjct: 211 VELLESMKARGCSPDVITYTILVDGLCKESKVAA-AWEVLREMLD-AGCVPNLVTYNSLL 268
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
L ++++ ++L D P+ T L+ + + K A +L I G
Sbjct: 269 HGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGT 328
Query: 185 A-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
L+ +N + G K +I + + S GI D Y ++ + ++ L
Sbjct: 329 PDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRL 388
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI-- 301
L KSR P +Y L D L K+G+ EA + M G D Y++LI
Sbjct: 389 LLYVKSR---GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDG 445
Query: 302 -CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
C + E L L+ + G T+
Sbjct: 446 LCKAGRVDEAHL----------------------LLARMVRMGTPPSTMTYN-------- 475
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR-------IA 413
+++ G A+++ E++ C P VTY +I+ CR +
Sbjct: 476 --------SLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVV 527
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
L +A+ + D +AYSS++ K GR+ +A+ +M G P+ Y+
Sbjct: 528 LLEQAKARCVAAGGTALD--TIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYS 585
Query: 474 SLMDMHGRAKNLRQVEKL 491
L++ ++K+L ++ L
Sbjct: 586 ILLEGLKKSKDLHELRHL 603
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 74/167 (44%)
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V Y++++ + + G I A +M++K PNV++ + L+D +AK + ++
Sbjct: 9 VYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFR 68
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
M+ + D V YT ++S + + D + +E R +G + ++ K +
Sbjct: 69 AMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNN 128
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ + +L + MKS Y++ ++ L G +A L Q
Sbjct: 129 EPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEM 175
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 204/481 (42%), Gaps = 6/481 (1%)
Query: 102 DYYNEAKKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
D + +L P S + L+ + + K + +++SLS + V P+ +T + L+
Sbjct: 39 DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 98
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
S + A ++L + G + F + + G + +++KM G
Sbjct: 99 NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 158
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
+ Y ++ K+G++ L +S + + +Y + DSL K + EA
Sbjct: 159 PNVVTYGTLINGLCKVGNTSAAIRLL---RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 215
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
F M +GI D Y SL+ + ++ E K L + +L D + +V
Sbjct: 216 FNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 275
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+EG V + ++V+ M ++ +++G + AVKV++ ++ +G P
Sbjct: 276 LCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPD 335
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
++Y ++IN YC+I KA +F EM +K + Y++++ GR++DA+ L
Sbjct: 336 VISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFH 395
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M A+G P++ Y+ L+D + +L + L K +E + PD Y +I RA
Sbjct: 396 EMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAG 455
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
E + ++ G IM+ K + E KL +M D Y+
Sbjct: 456 ELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYN 515
Query: 579 S 579
+
Sbjct: 516 T 516
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 148/338 (43%), Gaps = 2/338 (0%)
Query: 249 SRKLDS--TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
S ++DS P + + IL +S R A + + G DP+ + +LI
Sbjct: 79 STQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCV 138
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
++ A LF + ++G + L+ + G + ++ SM+ + I
Sbjct: 139 EGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVI 198
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
+I++ K R A ++ Q++ QG P TY S+++A C + + + +M
Sbjct: 199 YTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV 258
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
VV +S++V K G++ +A +V M +G EP+V Y +LMD H +
Sbjct: 259 NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMD 318
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ K++ M R+ PD +SYTT+I+ Y + + D + + E + D ++
Sbjct: 319 EAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLM 378
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ ++++ + L +M + G D Y +++L
Sbjct: 379 HGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSL 416
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/397 (19%), Positives = 175/397 (44%), Gaps = 22/397 (5%)
Query: 202 YYSTIL-VYEKMKSAG---------IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+YST+L + +M S G I+++S C+ ++G + V A L+ +
Sbjct: 71 HYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLN------RVGFAFSVLAKILKLGHQP 124
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
D T F+T + + LC G+ EAL F M ++G + Y +LI +
Sbjct: 125 -DPTTFTT-LIRGLC----VEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 178
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A L + E+ D + ++ ++ V + ++ M + ++V
Sbjct: 179 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 238
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ + + Q+++ +P V ++++++A C+ ++A ++ M Q+G +
Sbjct: 239 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 298
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
VV Y++++ + + +A+ + M KG P+V Y +L++ + + + + L
Sbjct: 299 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYL 358
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
++EM R++ PD +Y T++ + ++E G + D I++ K
Sbjct: 359 FEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCK 418
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+EE + LL+ +++ D ++Y+ ++ + AG
Sbjct: 419 NCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAG 455
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 159/395 (40%), Gaps = 8/395 (2%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I L R PD + S + + KD Q E A++ +++ P+ T L+
Sbjct: 181 IRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE-AFNLFSQMVG-QGISPDIFTYTSLV 238
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-E 183
L +W + +L +LPD S +V + + K A+ ++ + I G E
Sbjct: 239 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 298
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ + + M G+ + V++ M G D Y ++ Y KI +K L
Sbjct: 299 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYL 358
Query: 244 FLE-CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
F E C+ + T Y L L GR +A+ F +M +G + D Y+ L+
Sbjct: 359 FEEMCRKEWIPDT----KTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLD 414
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
S ++ A L K E + D +V ++ G +E D+ ++ + L
Sbjct: 415 SLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHP 474
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
S +++G KR A K++ ++ C P TY +I + + +A ++
Sbjct: 475 SVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLL 534
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
EM +GF V + +V M G + + +L+
Sbjct: 535 EEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFLM 569
>gi|167998294|ref|XP_001751853.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696951|gb|EDQ83288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 657
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 209/470 (44%), Gaps = 7/470 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
R + ++ +++ L Q + WD+ + F+ +V P+AH C+ L+A R+ A
Sbjct: 169 LRVDVRSMNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCTTLIAVLGYGRRLPEAL 228
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L + G E + FN+ M + + + ++E+MK G+ D+ + ++ A
Sbjct: 229 KLFRWMEKQGIERPIYTFNALMVACGRCGAGDTAVELFEEMKELGLAPDNITFRGLVSAT 288
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
G K A F+ + F+ + + + ++ + E+L + M E+G
Sbjct: 289 TAAGKW-KAAQSFINLM--QAGGFSFAIGEFTEMQWACARARNSRESLGLLQAMIEQGCE 345
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
Y +L+C++ + A +EKG D L+ G EK + V
Sbjct: 346 PRLENYNALLCAYEKTANWEEAVRTVVWIQEKGFTPDFITWSSLLGACANAGQAEKAVAV 405
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+E MK + C ++ + K + +++ +++ GC P +V + S+++AY +
Sbjct: 406 MEKMKENNFTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSGCPPNEVAWNSLLSAYEK 465
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ + + ++ G VVA+S+ ++ K G+ + A + +MK GC+PN+
Sbjct: 466 GRQWKRVLYTIEKQEELGVKLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVT 525
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y+SL+ +G + E ++K M + PD + ++ AY + R+ D + F++
Sbjct: 526 YSSLIKAYGDVGLWNKAESVFKSMLLEGIRPDSKACCALLRAYAKGRQLDKVMFFFDSMM 585
Query: 532 MNGGV-IDR-AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
G+ D+ A A I ++ + + +++M++ G D +Y +
Sbjct: 586 PRYGIKPDKYAYAAIFWACWT-CGEWQRAADYMENMEAAGCTPDTMIYTT 634
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 150/337 (44%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ H+ L LG R EALK FR M+++GI + +L+ + A ELF
Sbjct: 207 NAHVCTTLIAVLGYGRRLPEALKLFRWMEKQGIERPIYTFNALMVACGRCGAGDTAVELF 266
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+E +E G+ D LV G + + M+ + + ++
Sbjct: 267 EEMKELGLAPDNITFRGLVSATTAAGKWKAAQSFINLMQAGGFSFAIGEFTEMQWACARA 326
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
R ++ + + +I QGC P Y +++ AY + A + +A + + +Q+KGF + +
Sbjct: 327 RNSRESLGLLQAMIEQGCEPRLENYNALLCAYEKTANWEEAVRTVVWIQEKGFTPDFITW 386
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
SS++ G+ A+ ++ KMK PNV + L+ + + N + E+++ M
Sbjct: 387 SSLLGACANAGQAEKAVAVMEKMKENNFTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLN 446
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
P++V++ +++SAY + R++ + + G +D + +K Q +
Sbjct: 447 SGCPPNEVAWNSLLSAYEKGRQWKRVLYTIEKQEELGVKLDVVAWSTTISALAKAGQWQL 506
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
K ++ MK G + + Y S + A D GL +A+
Sbjct: 507 AEKKIRQMKQSGCQPNIVTYSSLIKAYGDVGLWNKAE 543
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 172/400 (43%), Gaps = 25/400 (6%)
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM 193
D+ V L E+ K + PD T LV++ A K+K A + + + G F+ A+
Sbjct: 260 DTAVELFEEMKELGLAPDNITFRGLVSATTAAGKWKAAQSFINLMQAGG------FSFAI 313
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIV---LDSGC------YCQIMEAYYKIGDSEKVAALF 244
G + + M ++ +S G++ ++ GC Y ++ AY K + E+
Sbjct: 314 GEFTE--MQWACARARNSRESLGLLQAMIEQGCEPRLENYNALLCAYEKTANWEEAVRTV 371
Query: 245 LECKSRKLDSTP-FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
+ + + TP F T + L + +G+A +A+ MKE + + L+ +
Sbjct: 372 VWIQEKGF--TPDFIT--WSSLLGACANAGQAEKAVAVMEKMKENNFTPNVVSWCYLLKA 427
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL-VEKTLDVVESMKNAKLKI 362
+ + EE+F G + EV +L E+G ++ L +E + +K+
Sbjct: 428 YQKTGNWEKTEEIFHSMLNSGCPPN-EVAWNSLLSAYEKGRQWKRVLYTIEKQEELGVKL 486
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
++ +K + A K Q+ GC P VTY+S+I AY + L++KAE VF
Sbjct: 487 DVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLIKAYGDVGLWNKAESVF 546
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK-GCEPNVWIYNSLMDMHGR 481
M +G A +++ Y K ++ M+ M + G +P+ + Y ++
Sbjct: 547 KSMLLEGIRPDSKACCALLRAYAKGRQLDKVMFFFDSMMPRYGIKPDKYAYAAIFWACWT 606
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
++ + ME TPD + YTT+I+ Y + D
Sbjct: 607 CGEWQRAADYMENMEAAGCTPDTMIYTTLITMYEAHGQVD 646
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 108/283 (38%), Gaps = 42/283 (14%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ T L+ + + + V++ E K N P+ + L+ + + ++
Sbjct: 379 FTPDFITWSSLLGACANAGQAEKAVAVMEKMKENNFTPNVVSWCYLLKAYQKTGNWEKTE 438
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD----------- 220
+ + G +A+NS + Y K + + EK + G+ LD
Sbjct: 439 EIFHSMLNSGCPPNEVAWNSLLSAYEKGRQWKRVLYTIEKQEELGVKLDVVAWSTTISAL 498
Query: 221 ------------------SGC------YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
SGC Y +++AY +G K ++F KS L+
Sbjct: 499 AKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLIKAYGDVGLWNKAESVF---KSMLLEGIR 555
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRD--MKEKGILEDPSIYASLICSFASITEVKLAE 314
+ L + K GR + + FF D M GI D YA++ + + E + A
Sbjct: 556 PDSKACCALLRAYAK-GRQLDKVMFFFDSMMPRYGIKPDKYAYAAIFWACWTCGEWQRAA 614
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
+ + E G D + L+ MY G V+K +++++ M N
Sbjct: 615 DYMENMEAAGCTPDTMIYTTLITMYEAHGQVDKAMEILKKMDN 657
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 163/369 (44%), Gaps = 3/369 (0%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+ +M GI+ D+ Y +++ + K GD + F E SR D TP Y +
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR--DITP-DVLTYTAIISG 395
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
+ G EA K F +M KG+ D + LI + +K A + + G +
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ +EG ++ +++ M L+ + +IVNG K AVK+
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+ + G VTY ++++AYC+ KA+++ EM KG +V ++ ++ + G
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ D L+ M AKG PN +NSL+ + NL+ ++K+M R V PD +Y
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
++ + +AR + E + G + + +++ F K + E ++ M+ E
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 569 GTKLDERLY 577
G D+ ++
Sbjct: 696 GLAADKEIF 704
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 164/383 (42%), Gaps = 42/383 (10%)
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL--ECKSRKLDSTPFSTHM 261
+ I+V+ + G+ + Y ++ ++G ++ L L E K D +ST
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST-- 286
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ + + G + K MK KG+ + IY S+I I ++ AEE F E
Sbjct: 287 ---VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+G+L D + +++GF KR
Sbjct: 344 RQGILPDT-----------------------------------VVYTTLIDGFCKRGDIR 368
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
AA K + ++ S+ P +TY +II+ +C+I +A K+F EM KG + V ++ ++
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y K G ++DA + M GC PNV Y +L+D + +L +L EM + +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ +Y ++++ ++ + VK EF G D ++ + K ++++ ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 562 LQDMKSEGTKLDERLYHSAMNAL 584
L++M +G + ++ MN
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGF 571
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 149/325 (45%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
A+ FR+ E G+ + + Y +I + +K A L E KG D +V
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
Y G ++K ++E MK LK + I +I+ + A + + ++I QG +P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
V Y ++I+ +C+ A K F EM + V+ Y+++++ + + G + +A L
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+M KG EP+ + L++ + +A +++ ++ M + +P+ V+YTT+I +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ D + +E G + +V K IEE VKL+ + ++ G D Y
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 578 HSAMNALRDAGLQMQAQWLQQNFEG 602
+ M+A +G +AQ + + G
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLG 554
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 5/264 (1%)
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY--WAAVK 385
DP V + ++ GL+ + V E M N L +S SC + + Y A+
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLS-VDSCNVYLTRLSKDCYKTATAII 232
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
V+ + G +Y +I+ C++ +A + + M+ KG+ V++YS++V Y
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 446 KTGRIRDAMW-LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ G + D +W L+ MK KG +PN +IY S++ + R L + E+ + EM R+ + PD
Sbjct: 293 RFGEL-DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 351
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
V YTT+I + + + KF+ E D ++ F ++ + E KL +
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 565 MKSEGTKLDERLYHSAMNALRDAG 588
M +G + D + +N AG
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAG 435
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 144/340 (42%), Gaps = 8/340 (2%)
Query: 147 NVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYST 205
++ PD T + +++ C + ++F E + F + GY K
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
V+ M AG + Y +++ K GD + L E L F+ Y +
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT---YNSI 497
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ L KSG EA+K + + G+ D Y +L+ ++ E+ A+E+ KE KG+
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 326 LRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
P + VLM + G++E ++ M + + ++V + R AA
Sbjct: 558 --QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+Y+ + S+G P TY +++ +C+ +A +F EM+ KGF V YS ++
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+ K + +A + +M+ +G + I++ D + K
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 715
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 184/420 (43%), Gaps = 43/420 (10%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +LIR L +S+ D + P+ T + LVA+ RA + A L
Sbjct: 148 PNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERL 207
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + + G + L+ FNS + G K V+++M G+ D Y ++ Y K
Sbjct: 208 VGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCK 267
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G S EAL F +M +KGI+ D
Sbjct: 268 AGCSH--------------------------------------EALSVFAEMTQKGIMPD 289
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ SLI ++ A L ++ E+G+ + L+ + ++G ++ L V
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M+ ++K S A++NG+ A ++ ++ ++G P VTY++II+AYC+
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
A ++ +M +KG + YSS++ + + R+ DA L M G +P+ + Y
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR-AREFD---MCVKFYNE 529
SL+D H + N+ + L +M + V PD V+Y+ +I+ ++ AR + + K Y+E
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 529
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 153/333 (45%), Gaps = 4/333 (1%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D + + Y IL +L G EAL RDM+ G + Y +L+ +F EV
Sbjct: 144 DGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDG 203
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
AE L + G+ + +V + G +E V + M L +V
Sbjct: 204 AERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVG 263
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G+ K A+ V+ ++ +G +P VT+ S+I+ C+ A + +M+++G
Sbjct: 264 GYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQM 323
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
V +++++ + K G + DA+ V M+ +P+V YN+L++ + + + +L
Sbjct: 324 NEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELL 383
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF-YNEFRMNGGVIDRAIA-GIMVGVFS 550
EME + + PD V+Y+T+ISAY + D F N+ + GV+ AI ++ V
Sbjct: 384 HEMEAKGLKPDVVTYSTIISAY--CKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLC 441
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ ++ + L ++M G + DE Y S ++
Sbjct: 442 EEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDG 474
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%)
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+A + ++ ++S G P TY +I A C +A + +M+ G VV Y+++V
Sbjct: 133 SARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLV 192
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
A + + G + A LV M G +PN+ +NS+++ +A + K++ EM R +
Sbjct: 193 AAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLA 252
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD VSY T++ Y +A + + E G + D ++ V K +E V L
Sbjct: 253 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTL 312
Query: 562 LQDMKSEGTKLDE 574
++ M+ G +++E
Sbjct: 313 VRQMRERGLQMNE 325
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/457 (21%), Positives = 177/457 (38%), Gaps = 64/457 (14%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILV 208
P+ T + +V +A K + A + + +G +++N+ +GGY K + + V
Sbjct: 218 PNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSV 277
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+ +M GI+ D + ++ K G+ E L + + R L + + L D
Sbjct: 278 FAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVT---FTALIDG 334
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
K G +AL R M++ I Y +LI + + + A EL E E KG+ D
Sbjct: 335 FCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPD 394
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
V+ Y I++ + K +A ++ +
Sbjct: 395 -------VVTY----------------------------STIISAYCKNCDTHSAFELNQ 419
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
Q++ +G +P +TY+S+I C S A +F M + G Y+S++ + K G
Sbjct: 420 QMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEG 479
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ A+ L KM G P+V Y+ L++ ++ + ++L ++ + P Y
Sbjct: 480 NVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYD 539
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
++ +A E + F M G + E K+ Q M
Sbjct: 540 ALMHCCRKA-ELKSVLALLKGFCMKG-------------------LMNEADKVYQSMLDR 579
Query: 569 GTKLDERLYHSAMNALRDAGLQMQA-----QWLQQNF 600
LD +Y ++ AG M+A Q LQ+ F
Sbjct: 580 NWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGF 616
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 171/411 (41%), Gaps = 29/411 (7%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ F+S ++GM K + ++ A ++E + P+ + L+ ++ +
Sbjct: 218 PNLVTFNSMVNGMCKAGKMED-ARKVFDEMMR-EGLAPDGVSYNTLVGGYCKAGCSHEAL 275
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
S+ + ++PD T + L+ +A + A TL++ G ++ + F + + G+
Sbjct: 276 SVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGF 335
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDS 254
K +L M+ I CY ++ Y +G ++ L +E K K D
Sbjct: 336 CKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDV 395
Query: 255 TPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
+ST + Y CD+ A + + M EKG+L D Y+SLI +
Sbjct: 396 VTYSTIISAYCKNCDT-------HSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSD 448
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A LFK + G+ D L+ + +EG VE+ L + + M A + ++N
Sbjct: 449 AHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLIN 508
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN---------------AYCRIALYSK 417
G SK A ++ +L + IP Y ++++ +C L ++
Sbjct: 509 GLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNE 568
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
A+KV+ M + ++ YS ++ + + G + A+ +M +G PN
Sbjct: 569 ADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPN 619
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 123/291 (42%), Gaps = 26/291 (8%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
ELN+ + +PDA + S + + ++ + + A+ + KL +P++ T LI
Sbjct: 416 ELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSD-AHVLFKNMIKL-GLQPDEFTYTSLID 473
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVR-ARKFKIANTLLQVFITDGEI 184
+ + +SL + VLPD T S L+ + AR + L +++ +
Sbjct: 474 GHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIP 533
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
A +++ M K ++KS +L C +M +++KV
Sbjct: 534 ANTKYDALMHCCRK-----------AELKSVLALLKGFCMKGLMN------EADKVYQSM 576
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
L+ ++ LD + +Y +L ++G +AL F + M ++G + + SLI
Sbjct: 577 LD-RNWNLDGS-----VYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGL 630
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
V A+++ ++ L D E L+ + + EG V+ LDV+ M
Sbjct: 631 FENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGM 681
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 203/481 (42%), Gaps = 41/481 (8%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
T +LI LV++ SL+++ D HT + +V + +K + A L++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 179 ITDGEIALLA-FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
+G +A +N+ + G K+ I + K ++D+GC
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRK------IVDNGC-------------- 100
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
TP Y L D LGK R+FEA K F++M +G+ D Y
Sbjct: 101 -----------------TP-DVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCY 142
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
+LI ++ A ++K +G + D ++ + G + + + +SM+
Sbjct: 143 TALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEA 202
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
L ++ + A+++G K R A+++ Q+ C P +TY +I+ C+ +
Sbjct: 203 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAA 262
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A F EM + G V Y+ +++ + K G A + M + C PNV Y +L+
Sbjct: 263 ARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLIS 322
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ + L + ++ M+ R PD Y++++ ++ + + ++E + GV
Sbjct: 323 GLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERS-GVA 381
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQ 597
+ ++ K ++++E V L ++ EG Y+S ++AL +G + Q +
Sbjct: 382 NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMP-HPYAYNSIISALIKSGKVNEGQAVY 440
Query: 598 Q 598
Q
Sbjct: 441 Q 441
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/431 (19%), Positives = 158/431 (36%), Gaps = 76/431 (17%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I+L R PD + S + G+ K ++ E AY + E + LI
Sbjct: 89 IDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFE-AYKLFKEMAS-RGLALDTVCYTALI 146
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
R L+Q+ K S+ + +PD T S ++ +A + A
Sbjct: 147 RGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAA------------- 193
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+ +++ M++ G+ + Y ++ K + AL
Sbjct: 194 ---------------------VRIFKSMEARGLAPNEVVYSALIHGLCKARKMD--CALE 230
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ + +K TP T Y IL D L KSG A FF +M E G D Y LI F
Sbjct: 231 MLAQMKKAFCTP-DTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGF 289
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ G + V + M +++ +
Sbjct: 290 C-----------------------------------KAGNTDAACGVFDDMSSSRCSPNV 314
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++G KRR A Y+ + +GC P Y+S+++ C+ +F E
Sbjct: 315 VTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDE 374
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M++ G + ++ K R+ +A+ L ++ +G P+ + YNS++ ++
Sbjct: 375 MERSGVAN-SQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGK 432
Query: 485 LRQVEKLWKEM 495
+ + + +++EM
Sbjct: 433 VNEGQAVYQEM 443
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/492 (21%), Positives = 215/492 (43%), Gaps = 10/492 (2%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP + L+R L ++ V L + V PD T L+ A A
Sbjct: 91 RPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVE 150
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
LL G E ++ ++ + GY K + S V+E+M GI D Y ++++
Sbjct: 151 LLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLC 210
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+ G +K A + R L+ + Y +L +S+ K G EAL ++M EKG+
Sbjct: 211 RHGKVKKAARVMDMMTERGLEPNVVT---YNVLINSMCKEGSVREALDLRKNMSEKGVQP 267
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLD 350
D Y +LI +S+ E+ A L +E + P++ ++ + G + + L
Sbjct: 268 DVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQ 327
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
V M + + ++ G + A+++ +++ S G P TY+ +IN +C
Sbjct: 328 VRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFC 387
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
++ +AE EM+ +G + V Y ++ G + A L +M + C+ +
Sbjct: 388 KMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMD-RNCKLDAA 446
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
Y++++ ++ + E+ K+M + PD V+Y+ I+ + ++ + + +
Sbjct: 447 AYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQM 506
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
+G V D A+ ++ + E++++L ++M ++ LD ++ + + +L G
Sbjct: 507 TASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL---GAS 563
Query: 591 MQAQWLQQNFEG 602
++ Q L Q+ G
Sbjct: 564 IEGQKLLQSLPG 575
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 175/420 (41%), Gaps = 80/420 (19%)
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFL---ECKSRKLDSTPFSTHMYKILCDSLGKSGR 274
V D+ Y ++ A + G + AALFL +L S P + Y L +L R
Sbjct: 53 VRDAVSYNTVLAALCRQGCLD--AALFLLRVMSHEPRLASRPNAIS-YTTLMRALCADRR 109
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
A +A+ R M++ G+ D Y +LI +V A EL E E G+ +P V +
Sbjct: 110 AAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGI--EPNVVV- 166
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV-KVYEQLISQ 393
SC +++G+ K G W +V KV+E++ +
Sbjct: 167 -------------------------------YSC-LLHGYCKT-GRWESVGKVFEEMSGR 193
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G P V Y ++I++ CR KA +V M ++G + VV Y+ ++ K G +R+A
Sbjct: 194 GIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREA 253
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER--RKVTPDKVSYTTVI 511
+ L M KG +P+V YN+L+ + + L +EM + +V PD +++ +VI
Sbjct: 254 LDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVI 313
Query: 512 S----------------------------AYN-------RAREFDMCVKFYNEFRMNGGV 536
A+N R + ++ +E +G
Sbjct: 314 HGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQ 373
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
D I++ F K+ Q+E L +M+ +G + + Y + A+ D G+ QA+ L
Sbjct: 374 PDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDL 433
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 200/467 (42%), Gaps = 23/467 (4%)
Query: 136 IVSLSEDFKIYNVLP---DAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA----LLA 188
++ L E + + LP DA + + ++A+ R A LL+V + +A ++
Sbjct: 37 LLPLPESPALLSALPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAIS 96
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-C 247
+ + M + + M+ G+ D Y ++ D + L E C
Sbjct: 97 YTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMC 156
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+S + +Y L K+GR K F +M +GI D +Y +LI S
Sbjct: 157 ES----GIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRH 212
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDC 365
+VK A + E+G+ +P V VL+ +EG V + LD+ ++M ++
Sbjct: 213 GKVKKAARVMDMMTERGL--EPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVV 270
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQG---CIPGQVTYASIINAYCRIALYSKAEKVF 422
++ G S A+ + E+++ QG P +T+ S+I+ C+I +A +V
Sbjct: 271 TYNTLITGLSSVLEMDEAMALLEEMM-QGETRVRPDLMTFNSVIHGLCKIGWMRQALQVR 329
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
M + G +VA++ ++ + +++ AM L+ +M + G +P+ + Y+ L++ +
Sbjct: 330 AMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKM 389
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
+ + + E EM + + P+ V Y ++ A +NE N + A +
Sbjct: 390 RQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYS 449
Query: 543 GIMVGVF-SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
++ G F S +I E + L+DM EG D Y +N +G
Sbjct: 450 TMIHGAFKSGEKKIAE--EFLKDMIDEGLIPDAVTYSIPINMFAKSG 494
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/204 (18%), Positives = 87/204 (42%), Gaps = 3/204 (1%)
Query: 400 VTYASIINAYCRIALYSKAE---KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
V+Y +++ A CR A +V + ++Y++++ R A+ L
Sbjct: 57 VSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGL 116
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ M+ G P+V Y +L+ A ++ +L EM + P+ V Y+ ++ Y +
Sbjct: 117 LRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCK 176
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++ K + E G D + ++ + ++++ +++ M G + +
Sbjct: 177 TGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVT 236
Query: 577 YHSAMNALRDAGLQMQAQWLQQNF 600
Y+ +N++ G +A L++N
Sbjct: 237 YNVLINSMCKEGSVREALDLRKNM 260
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 215/480 (44%), Gaps = 11/480 (2%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
+I+ L + K+ D S+ + + PD T S ++ +++ A +L+ + G
Sbjct: 251 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 310
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ +NS + GY+ M+ ++ V+++M S G++ + A +K G + +
Sbjct: 311 TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAK 370
Query: 242 ALF--LECKSRKLDSTPFST--HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
+F + K K D +ST H Y DS + F M KGI + ++
Sbjct: 371 CIFDSMVLKGPKPDIISYSTMLHGYATATDSC-----LADVHNIFNLMLTKGIAPNKHVF 425
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
LI ++A + A +F++ + KGM+ D ++ G ++ L M +
Sbjct: 426 NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVD 485
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY-ASIINAYCRIALYS 416
+ S+ + ++ G A ++ +++++ P V Y +SIIN C+ +
Sbjct: 486 IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVA 545
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ + + M Q G VV ++S++ Y G + +A L+ M + G EPN +IY +L+
Sbjct: 546 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 605
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D + + + ++++M + V P V Y+ ++ +AR K ++E +G
Sbjct: 606 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 665
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ G+++G + + +E LL+ + + K D ++ ++A+ G + +A+ L
Sbjct: 666 VSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKEL 725
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/480 (19%), Positives = 190/480 (39%), Gaps = 17/480 (3%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP T LI S W+ V + + V+P C+ + + + + A
Sbjct: 312 RPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKC 371
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKL--HMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ + G + ++++++ + GY ++ M + GI + + ++ A
Sbjct: 372 IFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 431
Query: 231 YYKIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
Y + G +K +F + +++ + D+ F+T + SL + GR +AL F M +
Sbjct: 432 YARCGMMDKAMLIFEDMQNKGMIPDTVTFAT-----VISSLCRIGRLDDALHKFNHMVDI 486
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK----LVLMYIEEGL 344
G+ ++Y LI + E+ A+EL E K + P +K ++ +EG
Sbjct: 487 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDI---PPPGVKYFSSIINNLCKEGR 543
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V + D+++ M + + +++ G+ A + + + S G P Y +
Sbjct: 544 VAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 603
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+++ YC+ A VF +M KG V YS ++ + R A + +M G
Sbjct: 604 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 663
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
++ Y ++ R + L +++ V D +++ VISA +
Sbjct: 664 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 723
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ ++ G V + +M+ K EE L ++ G D RL + + L
Sbjct: 724 ELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRML 783
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 108/260 (41%), Gaps = 41/260 (15%)
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
D S +++ GF K A ++ +++ QG +P + SII C++ KAE +
Sbjct: 210 DDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQ 269
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD------ 477
+M G + YS ++ K+ + A ++ +M G PN YNSL+
Sbjct: 270 KMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISG 329
Query: 478 ---------------------------MHGRAKNLRQVEK--LWKEMERRKVTPDKVSYT 508
+H K+ R E ++ M + PD +SY+
Sbjct: 330 MWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYS 389
Query: 509 TVISAYNRAREFDMCV----KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
T++ Y A D C+ +N G ++ + I++ +++ +++ + + +D
Sbjct: 390 TMLHGY--ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 447
Query: 565 MKSEGTKLDERLYHSAMNAL 584
M+++G D + + +++L
Sbjct: 448 MQNKGMIPDTVTFATVISSL 467
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 178/415 (42%), Gaps = 42/415 (10%)
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
E ++ +NS + G K + ++E MKS Y +++ ++ G E+ A
Sbjct: 7 EPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMA 66
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
LF E LD + IL L ++G+ AL+FFR M ++ C
Sbjct: 67 LFQE----MLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-------------C 109
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
S IT L + L K V + ++++ESMK A+
Sbjct: 110 SPNVITYSVLIDGLCKANR-----------------------VSQAVELLESMK-ARGCS 145
Query: 363 SDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
D I+ I V+G K AA +V +++ GC+P VTY S+++ CR S A +
Sbjct: 146 PDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALAL 205
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
+M +G VV Y +++ K GR++DA ++A M KG P++ IYN L++ +
Sbjct: 206 MRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCK 265
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
A + + L + + PD V+Y++VI R+ D + + G D +
Sbjct: 266 ADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVIL 325
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ K +++E L + M +G D Y + ++ L AG +A L
Sbjct: 326 YSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLL 380
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/497 (22%), Positives = 208/497 (41%), Gaps = 25/497 (5%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ ++S + G+ K+ + A + + K + E P T L+ L ++ K + +
Sbjct: 8 PNVVTYNSLIDGLCKNNEPDR-AQELFEHMKSV-ECSPSMVTYNTLLDGLFRTGKLERAM 65
Query: 138 SL--------SEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAF 189
+L S D +N+L V RA K + A + ++ +
Sbjct: 66 ALFQEMLDRRSHDVISFNIL---------VTGLCRAGKIETALEFFRKMDDRCSPNVITY 116
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
+ + G K + + + E MK+ G D Y +++ K KVAA + E
Sbjct: 117 SVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCK---ESKVAAAW-EVLR 172
Query: 250 RKLDSTPFSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
LD+ + Y L L ++ R +AL RDM +G + Y +LI +
Sbjct: 173 EMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVG 232
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
VK A + + +KG D + L+ + V++++ ++ + +K
Sbjct: 233 RVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYS 292
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++ G + A ++ + S+GC P + Y+++I+ C+ +A ++ M
Sbjct: 293 SVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGD 352
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G D VV YS+++ K GR+ +A L+A+M G P+ YNSL+ +L +
Sbjct: 353 GCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEA 412
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFD-MCVKFYNEFRMNGGVIDRAIAGIMVG 547
+L +EMER P V+Y +I R D + ++ E NG + D I++
Sbjct: 413 IELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLE 472
Query: 548 VFSKLSQIEELVKLLQD 564
K + EL L+ D
Sbjct: 473 GLKKSKDLHELRHLVLD 489
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 81/162 (50%), Gaps = 6/162 (3%)
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M+ G + VV Y+S++ K A L MK+ C P++ YN+L+D R
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF--RMNGGVIDRAIA 542
L + L++EM R+ + D +S+ +++ RA + + ++F+ + R + VI +
Sbjct: 61 LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYS-- 117
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+++ K +++ + V+LL+ MK+ G D Y ++ L
Sbjct: 118 -VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGL 158
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 199/485 (41%), Gaps = 77/485 (15%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
F +G Y + + +E M++ GI S Y ++ AY D E+ L C
Sbjct: 297 FGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEA----LSC- 351
Query: 249 SRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
RK++ + Y I+ K G A A +F+ KE+ + IY ++I ++
Sbjct: 352 VRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQ 411
Query: 307 ITEVKLAEELFKEAEEKG----------------MLRDPEVCLK---------------- 334
+ AE L +E EE+G M+R+ E CL
Sbjct: 412 ACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVIT 471
Query: 335 ---LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L+ MY + G V K L+V + MK+ +K + ++NGF K + + A V+E +I
Sbjct: 472 YGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVI 531
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
G P V Y +II A+C + +A + EMQ++ + ++ + + G +R
Sbjct: 532 KDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMR 591
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
A+ + M+ GC P V +N+L+ + + + ++ EM V+PD+ +YTT++
Sbjct: 592 RALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIM 651
Query: 512 SAY----NRAREFDMCVKFYNEF-----------------------------RMNGGVID 538
Y + + F+ K NE MN I
Sbjct: 652 HGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIP 711
Query: 539 RA--IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
R + I++ +++ I E L+Q M EG + D Y S +NA AG ++A
Sbjct: 712 RNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKT 771
Query: 597 QQNFE 601
+ E
Sbjct: 772 MEEME 776
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 166/376 (44%), Gaps = 4/376 (1%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+++ + + Y K+ + V + MKS GI + Y ++ + K+ D A+F
Sbjct: 468 SVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVF 527
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ D +Y + + G A+ ++M+++ + +I F
Sbjct: 528 EDVIK---DGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGF 584
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
A E++ A E+F G + LVL +E+ +EK +++++ M A + +
Sbjct: 585 ARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDE 644
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
I++G++ A + + ++ ++G TY +++ A C+ A V E
Sbjct: 645 HTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTRE 704
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M + + Y+ ++ + + G I +A L+ +M +G +P++ Y S ++ +A +
Sbjct: 705 MNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGD 764
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG- 543
+ + K +EME V P+ +YTT+I + A + + + E ++ G D+A+
Sbjct: 765 MLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHC 824
Query: 544 IMVGVFSKLSQIEELV 559
+M + S+ + E +
Sbjct: 825 LMTSLLSRATVAEAYI 840
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 189/404 (46%), Gaps = 5/404 (1%)
Query: 181 DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
D IA+ +++ M GY + ++V++++K G Y ++ Y K+G K+
Sbjct: 444 DAPIAI--YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVG---KI 498
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
+ + K + + Y ++ + K A F DM ++G+ D +Y ++
Sbjct: 499 SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 558
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
I +F + + A + KE ++ + ++ Y + G + ++L+V + M+
Sbjct: 559 ISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 618
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ ++NG ++R AV++ +++ G + TY I+ Y + KA +
Sbjct: 619 VPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 678
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
F +Q +G D + Y +++ K+GR++ A+ + +M A+ N ++YN L+D
Sbjct: 679 YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 738
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
R ++ + L ++M++ V PD +YT+ ISA ++A + + + E G +
Sbjct: 739 RRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIK 798
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ +++ S E+ + ++MK+ G K D+ +YH + +L
Sbjct: 799 TYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 842
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 184/452 (40%), Gaps = 75/452 (16%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC-KSRKLDSTPFSTHMYKILC 266
+E+M++ GI S Y ++ AY D ++ L C + K + S Y ++
Sbjct: 329 TFERMRARGITPTSRIYTSLIHAYAVGRDMDEA----LSCVRKMKEEGIEMSLVTYSVIV 384
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG-- 324
K+G A A +F + K + SIY +I + ++ AE L +E EE+G
Sbjct: 385 GGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGID 444
Query: 325 --------------MLRDPE---VCLK----------------LVLMYIEEGLVEKTLDV 351
M+ D + V K L+ +Y + G + K L+V
Sbjct: 445 APIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 504
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
MK +K + ++NGF K + + A V+E ++ +G P + Y +II+A+C
Sbjct: 505 SRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCG 564
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ +A + EMQ+ + ++ Y K+G +R ++ + M+ GC P V
Sbjct: 565 MGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHT 624
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+N L++ + + + ++ EM V+ ++ +YT ++ Y + +++ +
Sbjct: 625 FNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 684
Query: 532 MNG------------------GVIDRAIA-----------------GIMVGVFSKLSQIE 556
G G + A+A I++ +++ +
Sbjct: 685 NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW 744
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E L+Q MK EG K D Y S ++A AG
Sbjct: 745 EAADLIQQMKKEGVKPDIHTYTSFISACSKAG 776
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 161/359 (44%), Gaps = 5/359 (1%)
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y + GD + F ++R + TP ++ +Y L + EAL R MKE+GI
Sbjct: 317 YGRRGDMHRARETFERMRARGI--TP-TSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGI 373
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
Y+ ++ F+ + A+ F EA+ + + K++ + + +E+
Sbjct: 374 EMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEA 433
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+V M+ + I +++G++ + V+++L G P VTY +IN Y
Sbjct: 434 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYT 493
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
++ SKA +V M+++G + YS M+ + K +A + M +G +P+V
Sbjct: 494 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 553
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+YN+++ N+ + + KEM++ + P ++ +I Y ++ + ++ ++
Sbjct: 554 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 613
Query: 531 RMNGGVID-RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
R G V G++ G+ K Q+E+ V++L +M G +E Y M G
Sbjct: 614 RRCGCVPTVHTFNGLINGLVEK-RQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 671
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 160/372 (43%), Gaps = 6/372 (1%)
Query: 108 KKLPE--FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
K+L E F P T LI + K + +S K V + T S ++ V+
Sbjct: 471 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 530
Query: 166 RKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
+ + A + + + +G + ++ +N+ + + + I ++M+ + +
Sbjct: 531 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 590
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
I+ Y K GD + +F R+ P + H + L + L + + +A++ +
Sbjct: 591 MPIIHGYAKSGDMRRSLEVF--DMMRRCGCVP-TVHTFNGLINGLVEKRQMEKAVEILDE 647
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M G+ + Y ++ +AS+ + A E F + +G+ D L+ + G
Sbjct: 648 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 707
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
++ L V + M + + + +++G+++R W A + +Q+ +G P TY S
Sbjct: 708 MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTS 767
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
I+A + ++A + EM+ G + Y++++ + + A+ +MKA G
Sbjct: 768 FISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMG 827
Query: 465 CEPNVWIYNSLM 476
+P+ +Y+ L+
Sbjct: 828 IKPDKAVYHCLL 839
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/182 (18%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ ++I+A+ +I+ S+ E + MV YG+ G + A +M+
Sbjct: 292 WQAVISAFEKISKPSRTE-----------------FGLMVKFYGRRGDMHRARETFERMR 334
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
A+G P IY SL+ + +++ + ++M+ + V+Y+ ++ +++A +
Sbjct: 335 ARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAE 394
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+++E + ++ +I G ++ + +E L+++M+ EG +YH+ M
Sbjct: 395 AADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMM 454
Query: 582 NA 583
+
Sbjct: 455 DG 456
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 91/239 (38%), Gaps = 38/239 (15%)
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
W AV + IS+ P + + ++ Y R +A + F M+ +G Y+S+
Sbjct: 292 WQAVISAFEKISK---PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSL 348
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEP--------------------------------- 467
+ Y + +A+ V KMK +G E
Sbjct: 349 IHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHK 408
Query: 468 --NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
N IY ++ H + N+ + E L +EME + Y T++ Y + +
Sbjct: 409 TLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV 468
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + G G ++ +++K+ +I + +++ + MK EG K + + Y +N
Sbjct: 469 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 527
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 123/536 (22%), Positives = 228/536 (42%), Gaps = 53/536 (9%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE--FRPEKSTLKLL 123
E+ R H PD +++ ++G+ T + + KK+ + +P T +
Sbjct: 188 EMVRSGHE----PDVISYNTLINGLCNSGNTNMAVHVF----KKMEQNGCKPNVVTYNTI 239
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG- 182
I L + + + + + + PDA T + +V + A L + +G
Sbjct: 240 IDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGC 299
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ ++ +N + K + +M GI D Y I+ +G +
Sbjct: 300 KPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIR 359
Query: 243 LF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
LF +E K K D ++T + DSL K +A++F +M ++GI + Y+++
Sbjct: 360 LFKKMEQKGCKPDVVAYNT-----IIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTI 414
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ F ++ ++ A +LFKE + ++ + LV +EG+V + V E+M +
Sbjct: 415 LHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGV 474
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ + A++NG+ R A KV+E ++ +GC P +Y +IN YC KA+
Sbjct: 475 EPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKA 534
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+ +M K V Y++++ GR+ DA L KM + G P + Y+ L++
Sbjct: 535 LLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLC 594
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+ +L + KL+K M+ +K+ PD + YT +I E GG ++ A
Sbjct: 595 KHGHLDEALKLFKSMKEKKLEPDIILYTILI-----------------EGMFIGGKLEVA 637
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
G+FSKLS ++G + R Y+ + L GL +A L
Sbjct: 638 -----KGLFSKLS-------------ADGIQPPGRTYNVMIKGLLKEGLSDEAYEL 675
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/495 (20%), Positives = 212/495 (42%), Gaps = 39/495 (7%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
+L +LI L + D VS+ + PD T + L+ K K+A L
Sbjct: 130 SLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEM 189
Query: 179 ITDG-EIALLAFNSAMGGYNK-------LHMY--------------YSTIL--------- 207
+ G E ++++N+ + G +H++ Y+TI+
Sbjct: 190 VRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLV 249
Query: 208 -----VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMY 262
+M GI D+ Y I+ +G + LF K + + Y
Sbjct: 250 NDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLF---KRMEQNGCKPDVVTY 306
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
I+ DSL K +A F +M ++GI D Y +++ + ++ A LFK+ E+
Sbjct: 307 NIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQ 366
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
KG D ++ ++ LV ++ + M + + + I++GF
Sbjct: 367 KGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDE 426
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A +++++++ + +P +T++ +++ C+ + S+A VF M +KG + + Y++++
Sbjct: 427 ATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMN 486
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
Y ++ +A + M KGC P++ YN L++ + ++ + + + L +M +K+TP
Sbjct: 487 GYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTP 546
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ V+Y T++ + + + +G + I++ K ++E +KL
Sbjct: 547 NTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLF 606
Query: 563 QDMKSEGTKLDERLY 577
+ MK + + D LY
Sbjct: 607 KSMKEKKLEPDIILY 621
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 156/352 (44%), Gaps = 4/352 (1%)
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
C L + + IL + L + A+ + M + GI D + +LI +
Sbjct: 116 CNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCN 175
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
++K+A EL+ E G +P+V L+ G + V + M+ K +
Sbjct: 176 EGKIKVAVELYNEMVRSG--HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNV 233
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
I++ K R A+ +++ +G P +TY SI++ C + ++A ++F
Sbjct: 234 VTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKR 293
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M+Q G VV Y+ ++ K + DA +++M +G P+V Y +++
Sbjct: 294 MEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQ 353
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
L + +L+K+ME++ PD V+Y T+I + + R + ++F +E G +
Sbjct: 354 LNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYST 413
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ F L Q++E +L ++M + + ++ L G+ +A+W+
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWV 465
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/406 (19%), Positives = 174/406 (42%), Gaps = 17/406 (4%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV-------LDSGCYCQIMEAYYKIGDS 237
+++ F +G K+ Y + + + +M G+ + C C++ + +
Sbjct: 92 SIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVW 151
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
K+ L ++ D F+T L + + G+ A++ + +M G D Y
Sbjct: 152 GKMFKLGIQ-----PDVITFTT-----LINGVCNEGKIKVAVELYNEMVRSGHEPDVISY 201
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
+LI + +A +FK+ E+ G + ++ ++ LV +D + M
Sbjct: 202 NTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVG 261
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ +IV+G A ++++++ GC P VTY II++ + L +
Sbjct: 262 RGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVND 321
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A EM +G VV Y++++ G++ +A+ L KM+ KGC+P+V YN+++D
Sbjct: 322 AADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIID 381
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ + + + EM R + P+ V+Y+T++ + + D + + E +
Sbjct: 382 SLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMP 441
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ I+V + + E + + M +G + + Y++ MN
Sbjct: 442 NTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNG 487
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 181/429 (42%), Gaps = 13/429 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE--FRPEKSTLKLLIRYLVQSKKWDS 135
PDA ++S +HG+ Q E + K++ + +P+ T ++I L + + +
Sbjct: 266 PDAITYNSIVHGLCCLGQLNEATRLF----KRMEQNGCKPDVVTYNIIIDSLYKDRLVND 321
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMG 194
+ + PD T + ++ + A L + G + ++A+N+ +
Sbjct: 322 AADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIID 381
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
K + + +M GI ++ Y I+ + +G ++ LF E R +
Sbjct: 382 SLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMP 441
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+T + IL D L + G EA F M EKG+ + Y +L+ + ++ A
Sbjct: 442 ---NTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEAR 498
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
++F+ KG D L+ Y ++K ++ M KL + I+ G
Sbjct: 499 KVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGL 558
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
A ++++++ S G +P +TY+ ++N C+ +A K+F M++K + +
Sbjct: 559 CYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDI 618
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD---MHGRAKNLRQVEKL 491
+ Y+ ++ G++ A L +K+ A G +P YN ++ G + ++ +
Sbjct: 619 ILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678
Query: 492 WKEMERRKV 500
WK M+ +
Sbjct: 679 WKMMKHNVI 687
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+K + Y V + Q+ G + +IN CR+ A V+ +M + G V
Sbjct: 104 AKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDV 163
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ +++++ G+I+ A+ L +M G EP+V YN+L++ + N ++K+
Sbjct: 164 ITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKK 223
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
ME+ P+ V+Y T+I + + R + + F +E G D +V L Q
Sbjct: 224 MEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQ 283
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNAL-RDAGLQMQAQWLQQ 598
+ E +L + M+ G K D Y+ +++L +D + A +L +
Sbjct: 284 LNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSE 328
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 84/205 (40%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P V + + + ++ YS + +M G V + + ++ + + A+ +
Sbjct: 91 PSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSV 150
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
KM G +P+V + +L++ ++ +L+ EM R PD +SY T+I+
Sbjct: 151 WGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCN 210
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ +M V + + NG + ++ K + + + L +M G D
Sbjct: 211 SGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAIT 270
Query: 577 YHSAMNALRDAGLQMQAQWLQQNFE 601
Y+S ++ L G +A L + E
Sbjct: 271 YNSIVHGLCCLGQLNEATRLFKRME 295
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/163 (18%), Positives = 67/163 (41%)
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M + +V + + K + ++L +M G V+ N L++ R
Sbjct: 81 FYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCR 140
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
++ +W +M + + PD +++TT+I+ + + V+ YNE +G D
Sbjct: 141 LNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVIS 200
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ V + + M+ G K + Y++ +++L
Sbjct: 201 YNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSL 243
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 199/459 (43%), Gaps = 12/459 (2%)
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAF 189
K + + VSLS ++ + PD T + L+ + ++L + G + + F
Sbjct: 73 KHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITF 132
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
+ + G + ++K+ + GI D Y ++ KIGD+ L
Sbjct: 133 TTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLV----- 187
Query: 250 RKLDS--TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
RK+D T + MY + D+L K EA F +M KGI D Y +LI F
Sbjct: 188 RKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIA 247
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDC 365
+++K A L E K + +P V +L+ +EG V++ +V+ M A +K
Sbjct: 248 SKLKEAIGLLNEMVLKTI--NPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVI 305
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
+++G+ A V+ + G P +Y +IN +C+ + +A +F EM
Sbjct: 306 TYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEM 365
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
QK +V YSS++ K+GRI L+ +M+ +G NV YNSL+D + +L
Sbjct: 366 HQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHL 425
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ L+ +M+ + + P ++T ++ + + + + G +D +M
Sbjct: 426 DRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVM 485
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ K +EE + +L M+ G + + +NAL
Sbjct: 486 INGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINAL 524
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 143/334 (42%), Gaps = 1/334 (0%)
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
TP KIL DS K A+ ++ KGI D LI F + ++
Sbjct: 56 TPPIIQFNKIL-DSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
+ + ++G L+ +G V K L + + +K ++NG
Sbjct: 115 SVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGV 174
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A+K+ ++ + P Y +II+A C+ L S+A +F EM KG V
Sbjct: 175 CKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADV 234
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V Y++++ + ++++A+ L+ +M K PNV+ YN L+D + +++ + +
Sbjct: 235 VTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAV 294
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M + V PD ++Y+T++ Y E +N + G D I++ F K
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKM 354
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
++E + L ++M + Y S ++ L +G
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/424 (18%), Positives = 169/424 (39%), Gaps = 21/424 (4%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD-------SGCYCQIMEAYYKIGDSE 238
++ FN + + K+ Y + + + +++ GI D C+C + + +
Sbjct: 59 IIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
K+ + + + F+T + K LC G+ +AL F + +GI D Y
Sbjct: 119 KILK-----RGYQPHTITFTT-LIKGLC----LKGQVNKALHFHDKLLAQGIKFDQVSYG 168
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMK 356
+LI I + + A +L ++ + G L P V + ++ + LV + + M
Sbjct: 169 TLINGVCKIGDTRGAIKLVRKID--GRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMT 226
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ ++ GF A+ + +++ + P TY +++A C+
Sbjct: 227 AKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+A+ V M + V+ YS+++ Y ++ A + M G P+V Y L+
Sbjct: 287 EAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILI 346
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+ + K + + L+KEM ++ + P V+Y+++I ++ +E R G
Sbjct: 347 NGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIP 406
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ ++ K ++ + L MK +G + + ++ L G AQ
Sbjct: 407 ANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEA 466
Query: 597 QQNF 600
Q+
Sbjct: 467 FQDL 470
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 103/252 (40%), Gaps = 10/252 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + + G + ++ + + A L P+ + +LI ++K D +
Sbjct: 302 PDVITYSTLMDGYFLVYELKKAQHVF--NAMSLMGVTPDVHSYTILINGFCKNKMVDEAL 359
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+L ++ N++P T S L+ ++ + L+ G A ++ +NS + G
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGL 419
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDS 254
K I ++ KMK GI S + +++ K G + F L K LD
Sbjct: 420 CKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLD- 478
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+ Y ++ + K G EAL M+E G + + + +I + E AE
Sbjct: 479 ----VYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAE 534
Query: 315 ELFKEAEEKGML 326
+L ++ +G+L
Sbjct: 535 KLLRQMICRGLL 546
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/195 (15%), Positives = 82/195 (42%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
AV + +++ P + + I++++ +I YS A + ++ KG ++ + ++
Sbjct: 43 AVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILIN 102
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ G+I ++AK+ +G +P+ + +L+ + + ++ + +
Sbjct: 103 CFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKF 162
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D+VSY T+I+ + + +K + + + ++ K + E L
Sbjct: 163 DQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLF 222
Query: 563 QDMKSEGTKLDERLY 577
+M ++G D Y
Sbjct: 223 SEMTAKGISADVVTY 237
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 209/471 (44%), Gaps = 36/471 (7%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP+ ST +LI+ L ++ + + L E+ + + +LPD T + T
Sbjct: 192 RPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFT----------------T 235
Query: 174 LLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
++Q FI +G + + AM V E+M AG V+ + ++ + K
Sbjct: 236 IMQGFIEEGNL-----DGAMR-------------VKEQMVEAGCVVTNVTVNVLVNGFCK 277
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G E+ A F+E S + P + + +L + L K+G AL+ M +G D
Sbjct: 278 EGRIEE-ALRFIEEMSLREGFFP-DKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPD 335
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y SLI + EV A ++ + E+ + ++ +E VE+ +
Sbjct: 336 IYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLAL 395
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+ + C +++ G R + A+++Y+++ ++GC P + TY +I++ C
Sbjct: 396 VLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRG 455
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+A + EM+ G + V+ Y++++ + K RI +A + +M+ +G N YN
Sbjct: 456 KLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYN 515
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+L+D +++ + + +L +M + PDK +Y ++++ + +A + +
Sbjct: 516 TLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASD 575
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G D G ++ K ++E KLL+ ++ +G L Y+ + AL
Sbjct: 576 GCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQAL 626
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/544 (21%), Positives = 234/544 (43%), Gaps = 48/544 (8%)
Query: 86 FLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI--------V 137
LH + ++ + + + +Y A K P F+P S K ++ L ++ ++D++ +
Sbjct: 59 LLHSLRREEDSSAVIHLFY-WASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKI 117
Query: 138 SLS--------------EDFKIYN--------------VLPDAHTCSRLVASCVRARKFK 169
SLS F +YN V+ + H + L+ V K K
Sbjct: 118 SLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLK 177
Query: 170 IANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
+ ++ G + FN + + H IL+ E+M+ G++ D + IM
Sbjct: 178 LVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIM 237
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDST-PFSTHMYKILCDSLGKSGRAFEALKFFRDMK- 286
+ + + G+ + + K + +++ + +L + K GR EAL+F +M
Sbjct: 238 QGFIEEGNLDGA----MRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSL 293
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGL 344
+G D + L+ + VK A E+ +G DP++ L+ + G
Sbjct: 294 REGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGF--DPDIYTYNSLISGLCKLGE 351
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V++ + V+ M + I++ K A K+ L +G +P TY S
Sbjct: 352 VDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNS 411
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I C ++ A +++ EM+ KG Y+ ++ G++++A+ L+ +M+ G
Sbjct: 412 LIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSG 471
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
C NV YN+L+D + K + + E+++ +ME + V+ + V+Y T+I ++ +
Sbjct: 472 CARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEAS 531
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ ++ M G D+ ++ F K I++ ++Q M S+G + D Y + + L
Sbjct: 532 QLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGL 591
Query: 585 RDAG 588
AG
Sbjct: 592 CKAG 595
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 184/441 (41%), Gaps = 13/441 (2%)
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+SL E F PD +T + LV + K A ++ + + +G + + +NS + G
Sbjct: 291 MSLREGF-----FPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISG 345
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
KL + V +M ++ Y I+ K E+ L L + +
Sbjct: 346 LCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGI--L 403
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P Y L L S A++ +++MK KG D Y LI S +++ A
Sbjct: 404 P-DVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALN 462
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L KE E G R+ L+ + + + + ++ + M+ + + +++G
Sbjct: 463 LLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLC 522
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A ++ +Q+I +G P + TY S++ +C+ KA + M G + +V
Sbjct: 523 KSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIV 582
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y +++A K GR+ A L+ ++ KG YN ++ R K ++ +L++EM
Sbjct: 583 TYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREM 642
Query: 496 ERRKVTPDKVSYTTVISAY-NRAREFDMCVKFYNEFRMNGGVID-RAIAGIMVGVFSKLS 553
+ PD V+Y V V F E G V + + + G+FS L+
Sbjct: 643 IEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFS-LA 701
Query: 554 QIEELVKLLQDMKSEGTKLDE 574
+ L+KL+ DM E K +
Sbjct: 702 MVGTLIKLI-DMVMEKAKFSD 721
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 163/369 (44%), Gaps = 3/369 (0%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+ +M GI+ D+ Y +++ + K GD + F E SR D TP Y +
Sbjct: 782 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR--DITP-DVLTYTAIISG 838
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
+ G EA K F +M KG+ D + LI + +K A + + G +
Sbjct: 839 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 898
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ +EG ++ +++ M L+ + +IVNG K AVK+
Sbjct: 899 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 958
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+ + G VTY ++++AYC+ KA+++ EM KG +V ++ ++ + G
Sbjct: 959 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 1018
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ D L+ M AKG PN +NSL+ + NL+ ++K+M R V PD +Y
Sbjct: 1019 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 1078
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
++ + +AR + E + G + + +++ F K + E ++ M+ E
Sbjct: 1079 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 1138
Query: 569 GTKLDERLY 577
G D+ ++
Sbjct: 1139 GLAADKEIF 1147
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 164/383 (42%), Gaps = 42/383 (10%)
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL--ECKSRKLDSTPFSTHM 261
+ I+V+ + G+ + Y ++ ++G ++ L L E K D +ST
Sbjct: 672 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST-- 729
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ + + G + K MK KG+ + IY S+I I ++ AEE F E
Sbjct: 730 ---VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 786
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+G+L D + +++GF KR
Sbjct: 787 RQGILPD-----------------------------------TVVYTTLIDGFCKRGDIR 811
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
AA K + ++ S+ P +TY +II+ +C+I +A K+F EM KG + V ++ ++
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y K G ++DA + M GC PNV Y +L+D + +L +L EM + +
Sbjct: 872 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ +Y ++++ ++ + VK EF G D ++ + K ++++ ++
Sbjct: 932 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 991
Query: 562 LQDMKSEGTKLDERLYHSAMNAL 584
L++M +G + ++ MN
Sbjct: 992 LKEMLGKGLQPTIVTFNVLMNGF 1014
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 146/317 (46%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
A+ FR+ E G+ + + Y +I + +K A L E KG D +V
Sbjct: 673 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
Y G ++K ++E MK LK + I +I+ + A + + ++I QG +P
Sbjct: 733 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
V Y ++I+ +C+ A K F EM + V+ Y+++++ + + G + +A L
Sbjct: 793 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 852
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+M KG EP+ + L++ + +A +++ ++ M + +P+ V+YTT+I +
Sbjct: 853 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 912
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ D + +E G + +V K IEE VKL+ + ++ G D Y
Sbjct: 913 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 972
Query: 578 HSAMNALRDAGLQMQAQ 594
+ M+A +G +AQ
Sbjct: 973 TTLMDAYCKSGEMDKAQ 989
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 5/264 (1%)
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY--WAAVK 385
DP V + ++ GL+ + V E M N L +S SC + + Y A+
Sbjct: 617 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLS-VDSCNVYLTRLSKDCYKTATAII 675
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
V+ + G +Y +I+ C++ +A + + M+ KG+ V++YS++V Y
Sbjct: 676 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 735
Query: 446 KTGRIRDAMW-LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ G + D +W L+ MK KG +PN +IY S++ + R L + E+ + EM R+ + PD
Sbjct: 736 RFGEL-DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 794
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
V YTT+I + + + KF+ E D ++ F ++ + E KL +
Sbjct: 795 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 854
Query: 565 MKSEGTKLDERLYHSAMNALRDAG 588
M +G + D + +N AG
Sbjct: 855 MFCKGLEPDSVTFTELINGYCKAG 878
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 144/340 (42%), Gaps = 8/340 (2%)
Query: 147 NVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYST 205
++ PD T + +++ C + ++F E + F + GY K
Sbjct: 824 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 883
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
V+ M AG + Y +++ K GD + L E L F+ Y +
Sbjct: 884 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT---YNSI 940
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ L KSG EA+K + + G+ D Y +L+ ++ E+ A+E+ KE KG+
Sbjct: 941 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 1000
Query: 326 LRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
P + VLM + G++E ++ M + + ++V + R AA
Sbjct: 1001 --QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 1058
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+Y+ + S+G P TY +++ +C+ +A +F EM+ KGF V YS ++
Sbjct: 1059 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 1118
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+ K + +A + +M+ +G + I++ D + K
Sbjct: 1119 FLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 1158
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 103/528 (19%), Positives = 235/528 (44%), Gaps = 4/528 (0%)
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
D + +PD ++ L+G+ + ++QE + A + P+ + +I +
Sbjct: 41 DELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFK 100
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLA 188
D S + + P+ T + ++A+ +A+ A +L + G + +
Sbjct: 101 EGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMT 160
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+NS + G+ I+ +KM+S G+ D Y +M+ K G + +F
Sbjct: 161 YNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 220
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
R L P T Y L G E M GI + +++ L+C++A
Sbjct: 221 KRGL--KPEIT-TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 277
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+V+ A +F + ++G+ + ++ + + G VE + E M + L + +
Sbjct: 278 KVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 337
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++++G + A ++ +++ +G + + SII+++C+ ++EK+F M +
Sbjct: 338 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 397
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G ++ YS+++ Y G++ +A L+A M + G +P+ Y++L++ + + ++
Sbjct: 398 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDA 457
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
L++EME V+PD ++Y ++ + R + Y +G ++ + I++
Sbjct: 458 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHG 517
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
K ++ +++ Q++ KL+ R ++ ++AL G +A+ L
Sbjct: 518 LCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 565
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 89/430 (20%), Positives = 168/430 (39%), Gaps = 12/430 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD ++S + + K+ + E + + K+ +PE +T L++ +
Sbjct: 191 PDVVTYNSLMDYLCKNGRCTEARKIFDSMTKR--GLKPEITTYGTLLQGYATKGALVEMH 248
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL----LAFNSAM 193
L + + P+ + S LV C A++ K+ +L VF + L + + + +
Sbjct: 249 GLLDLMVRNGIHPNHYVFSILV--CAYAKQEKVEEAML-VFSKMRQQGLNPNAVTYGAVI 305
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G K +L +E+M G+ + Y ++ E+ L LE R +
Sbjct: 306 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI- 364
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+T + + DS K GR E+ K F M G+ D Y++LI + ++ A
Sbjct: 365 --CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 422
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+L GM D L+ Y + ++ L + M+++ + I+ G
Sbjct: 423 TKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQG 482
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+ R AA ++Y + G TY I++ C+ L A ++F +
Sbjct: 483 LFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLE 542
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
++ M+ K GR +A L + G PN W Y + + L ++++L+
Sbjct: 543 ARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFL 602
Query: 494 EMERRKVTPD 503
ME T D
Sbjct: 603 SMEDNGCTVD 612
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 94/217 (43%), Gaps = 5/217 (2%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC---VVAYSS 439
A V+++L+ +G IP +Y ++N C +A ++ M G D C VV+YS+
Sbjct: 36 ARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGD-CPPDVVSYST 93
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ + K G + +M + PNV YNS++ +A+ + + ++ M +
Sbjct: 94 VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
V PD ++Y +++ + + + + F + R +G D ++ K + E
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
K+ M G K + Y + + G ++ L
Sbjct: 214 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 250
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/465 (21%), Positives = 190/465 (40%), Gaps = 39/465 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T +LI + ++ V L +D V P+A + +VA + A T+
Sbjct: 292 PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTV 351
Query: 175 LQVFITDGEIALLA-FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
++ + I A + + + G+ S +++M+ G+ D Y ++ +
Sbjct: 352 VEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCR 411
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G+ ++ + E +R+LD + Y +L D K G+ EA + M ++G+ +
Sbjct: 412 AGELKEAEKVLQEMLARRLDVDEVT---YTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPN 468
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y +L +V+ A EL E KG
Sbjct: 469 VVTYTALSDGLCKQGDVQAANELLHEMSNKG----------------------------- 499
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
L+++ C +++NG K A++ + + G P TY ++I+A C+
Sbjct: 500 ------LELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSG 553
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+A + EM G +V Y+ ++ + +GR+ L+ M K PN YN
Sbjct: 554 ELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYN 613
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
SLM + N++ +++K M R V P++ +Y +I + +AR F+NE
Sbjct: 614 SLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEK 673
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
G + + ++ + +K + E KL DM+ EG + +Y+
Sbjct: 674 GFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYN 718
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 165/381 (43%), Gaps = 40/381 (10%)
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMG 194
S + L E +++ LPD + CS N LL+V G +
Sbjct: 243 SRLPLDEAIELFQGLPDKNVCSY--------------NILLKVLCGAGRVE--------- 279
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD- 253
++++M S V+ G ++ Y +G+ E L + +R ++
Sbjct: 280 ---------DARQLFDEMASPPDVVTYGI---LIHGYCALGELENAVKLLDDMVARGVEP 327
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+ T + +LCD GR +AL DM ++ D ++Y +++ F + ++ A
Sbjct: 328 NATVYTSVVALLCDK----GRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSA 383
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
F E + KG+ D L+ G +++ V++ M +L + + +V+G
Sbjct: 384 RRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDG 443
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+ KR A +V+ ++ +G P VTY ++ + C+ A ++ EM KG +
Sbjct: 444 YCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELN 503
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
Y+S++ K G + AM +A M A G +P+V+ Y +L+D ++ L + L +
Sbjct: 504 ACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQ 563
Query: 494 EMERRKVTPDKVSYTTVISAY 514
EM + P V+Y +++ +
Sbjct: 564 EMLDNGIKPTIVTYNVLMNGF 584
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 157/345 (45%), Gaps = 8/345 (2%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y IL L +GR +A + F +M D Y LI + ++ E++ A +L +
Sbjct: 265 YNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMV 321
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+G+ + V +V + ++G V L VVE M + K+ + + + +++GF +
Sbjct: 322 ARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLV 381
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+A + ++++ +G VTY ++IN CR +AEKV EM + D V Y+ +V
Sbjct: 382 SARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLV 441
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y K G++ +A + M +G PNV Y +L D + +++ +L EM + +
Sbjct: 442 DGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLE 501
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
+ +Y ++I+ +A D ++ + G D ++ K +++ L
Sbjct: 502 LNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDL 561
Query: 562 LQDMKSEGTKLDERLYHSAMNAL----RDAGLQMQAQW-LQQNFE 601
LQ+M G K Y+ MN R G + +W L++N
Sbjct: 562 LQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIH 606
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 155/372 (41%), Gaps = 14/372 (3%)
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIA 185
LV +++W ++ + + D T + L+ RA + K A +LQ + ++
Sbjct: 380 LVSARRW------FDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVD 433
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+ + + GY K V+ M G+ + Y + + K GD + L
Sbjct: 434 EVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLH 493
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E ++ L+ + Y L + L K+G +A++ DM G+ D Y +LI +
Sbjct: 494 EMSNKGLE---LNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALC 550
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKIS 363
E+ A +L +E + G+ P + VLM + G VE ++E M + +
Sbjct: 551 KSGELDRAHDLLQEMLDNGI--KPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPN 608
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+++ + + ++Y+ + S+ P + TY +I +C+ +A+
Sbjct: 609 ATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHN 668
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM +KGF +YS+++ + K + +A L M+ +G +YN +D +
Sbjct: 669 EMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNED 728
Query: 484 NLRQVEKLWKEM 495
NL L E+
Sbjct: 729 NLEATLALCDEL 740
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 77/187 (41%), Gaps = 32/187 (17%)
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRD------------------------------ 452
IE+ Q DK V +Y+ ++ + GR+ D
Sbjct: 251 IELFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMASPPDVVTYGILIHGYCALGEL 310
Query: 453 --AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
A+ L+ M A+G EPN +Y S++ + + + ++M KV D+ YTTV
Sbjct: 311 ENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTV 370
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
+S + + ++++E + G D ++ + +++E K+LQ+M +
Sbjct: 371 LSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRL 430
Query: 571 KLDERLY 577
+DE Y
Sbjct: 431 DVDEVTY 437
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 117/287 (40%), Gaps = 12/287 (4%)
Query: 78 PDAKKFDSFLHGMLKDPQTQ---ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
P+ + + G+ K Q EL ++ N+ +L T LI L ++ D
Sbjct: 467 PNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLEL-----NACTYNSLINGLCKAGYLD 521
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAM 193
+ D + PD +T + L+ + ++ + A+ LLQ + +G + ++ +N M
Sbjct: 522 QAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLM 581
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G+ + E M I ++ Y +M+ Y + + ++ SR ++
Sbjct: 582 NGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVE 641
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+ + Y IL K+ EA F +M EKG S Y++LI + A
Sbjct: 642 P---NENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEA 698
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+LF + ++G +P+V + E +E TL + + + A +
Sbjct: 699 RKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASI 745
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 111/489 (22%), Positives = 210/489 (42%), Gaps = 54/489 (11%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ ST +I +L ++ K + L ++ K V PD +T + L+ S +A + A
Sbjct: 284 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQAR 343
Query: 173 TLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + G A ++ + + + Y K ++ +M AG ++ Y +++
Sbjct: 344 SWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGL 403
Query: 232 YKIGDSEKVAALFLEC-------------KSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
K G+ +K ++ + + + DS + Y L D L K+ + +A
Sbjct: 404 CKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDA 463
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+ M G + IY +LI F + ++ A+E+F + G L
Sbjct: 464 QELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPT---------- 513
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
V ++++M F RR A+KV Q++ C P
Sbjct: 514 ------VHTYTSLIDAM------------------FKDRR-LDLAMKVLSQMVESSCTPN 548
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
VTY ++I+ CRI KA K+ M++KG VV Y++++ GK+G++ ++ L
Sbjct: 549 VVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFI 608
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M KGC PN Y L++ A L + L EM++ Y +V+ + ++
Sbjct: 609 QMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF--SK 666
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD---ER 575
+F + E +G V + G+++ FSK ++EE ++L ++M + L+ +
Sbjct: 667 KFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKD 726
Query: 576 LYHSAMNAL 584
+Y S + AL
Sbjct: 727 MYTSLIQAL 735
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 176/394 (44%), Gaps = 22/394 (5%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
F + G K M + I V M G V D+ Y +++ + EK LF E K
Sbjct: 259 FARCLCGMGKFDMAFQIIKV---MMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMK 315
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
S ++ ++ Y IL DS K+G +A +F +M+ G + Y +L+ ++
Sbjct: 316 SVGVNPDVYT---YTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAK 372
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI------ 362
++ A ++F + G + LV + G ++K +V + +
Sbjct: 373 QLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYF 432
Query: 363 ----SDCIS------CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+D I+ A+++G K A ++ + ++S GC P + Y ++I+ +C++
Sbjct: 433 EGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKV 492
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
A++VF+ M + G+ V Y+S++ K R+ AM ++++M C PNV Y
Sbjct: 493 GKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTY 552
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+++D R ++ KL ME + +P+ V+YT +I ++ + D+ ++ + +
Sbjct: 553 TAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMST 612
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
G + +++ ++E LL +MK
Sbjct: 613 KGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK 646
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 147/376 (39%), Gaps = 56/376 (14%)
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS---GCYCQIM 228
N L+QV T G++ + G+ V ++M +G +D GC+ Q +
Sbjct: 44 NALVQVLATAGQMDM--------GFR----------VQKEMSESGFCMDKFTVGCFAQAL 85
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
+ D A + +E + KLD T T M L ++ EA+ F M+
Sbjct: 86 CKEGRWSD----ALVMIEREDFKLD-TVLCTQMIS----GLMEASLFDEAISFLHRMRCN 136
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
+ + Y +L+ F ++ + + ++G +P + LV Y
Sbjct: 137 SCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYA 196
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV----------------KVYEQLIS 392
+++ M + C G+ + ++ KVYE++++
Sbjct: 197 YKLLKRMAD----------CGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLA 246
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
C+ +V A+ C + + A ++ M KGF YS ++ + ++
Sbjct: 247 SSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEK 306
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A L +MK+ G P+V+ Y L+D +A + Q + EM + + V+YT ++
Sbjct: 307 AFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLH 366
Query: 513 AYNRAREFDMCVKFYN 528
AY +A++ +N
Sbjct: 367 AYLKAKQLPQASDIFN 382
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 126/322 (39%), Gaps = 10/322 (3%)
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
++K+ G + Y +L+ A+ ++ + + KE E G D +EG
Sbjct: 30 ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
L ++E K+ + +++G + + A+ ++ CIP VTY
Sbjct: 90 RWSDALVMIE---REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
+++ + + +++ M ++G + ++S+V Y A L+ +M
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQ------VEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
GC P YN + + L EK+++EM +KV+
Sbjct: 207 GCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGM 266
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+FDM + G V D + ++ + ++E+ L Q+MKS G D Y
Sbjct: 267 GKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTY 326
Query: 578 HSAMNALRDAGLQMQAQ-WLQQ 598
+++ AGL QA+ W +
Sbjct: 327 TILIDSFCKAGLIEQARSWFDE 348
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 6/226 (2%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC------RIALYSKAEKVF 422
++V+ + R Y A K+ +++ GC PG V Y I + C L + AEKV+
Sbjct: 182 SLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVY 241
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
EM V ++ G+ A ++ M KG P+ Y+ ++ A
Sbjct: 242 EEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEA 301
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
+ + L++EM+ V PD +YT +I ++ +A + +++E R G +
Sbjct: 302 MKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTY 361
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
++ + K Q+ + + M G + Y + ++ L AG
Sbjct: 362 TALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAG 407
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 135/356 (37%), Gaps = 37/356 (10%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP---SIYASLICSFASITE--VKL 312
S Y L L +G+ + ++M E G D +A +C ++ V +
Sbjct: 39 SGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVMI 98
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC---- 368
E FK D +C +++ +E L ++ + + M+ C SC
Sbjct: 99 EREDFK--------LDTVLCTQMISGLMEASLFDEAISFLHRMR--------CNSCIPNV 142
Query: 369 ----AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
++ GF K++ ++ ++ +GC P + S++++YC Y A K+
Sbjct: 143 VTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKR 202
Query: 425 MQQKGFDKCVVAYSSMVAMY--GKTGRIRDAMWLVAK----MKAKGCEPN-VWIYNSLMD 477
M G VAY+ + G+ D + L K M A C N V N
Sbjct: 203 MADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARC 262
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ G K ++ K M + PD +Y+ VI+ A + + + E + G
Sbjct: 263 LCGMGK-FDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNP 321
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
D I++ F K IE+ +M+S G + Y + ++A A QA
Sbjct: 322 DVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQA 377
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 116/529 (21%), Positives = 220/529 (41%), Gaps = 46/529 (8%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQE-LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
+PD +++ L G+ + ++QE L + + P+ + ++ + D
Sbjct: 160 IPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDK 219
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMG 194
S + +LPD T S ++A+ +A+ A +L + +G + + +NS +
Sbjct: 220 AYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 279
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
GY I +KM+S G+ + Y +M
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLM-------------------------- 313
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
LC K+GR+ EA K F M ++G+ D + Y +L+ +A+ +
Sbjct: 314 --------NYLC----KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
L G+ D V L+ Y ++ V++ + V M+ L + +++
Sbjct: 362 ALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 421
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A+ +EQ+I +G P + Y S+I+ C + KAE++ +EM +G
Sbjct: 422 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNT 481
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ ++S++ + K GR+ ++ L M G +P++ YN+L+D A + + KL
Sbjct: 482 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG---GVIDRAIAGIMVGVFSK 551
M V PD V+Y T+I+ Y R D + + E +G +I I I+ G+F
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI--ILQGLFHT 599
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ +L + GT+L+ Y+ ++ L L +A + QN
Sbjct: 600 -RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 117/554 (21%), Positives = 221/554 (39%), Gaps = 39/554 (7%)
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
D + PD +++ L+G K+ + + AY Y+E P+ T +I L +
Sbjct: 191 DDRGGGSPPDVVSYNTVLNGFFKEGDSDK-AYSTYHEMLDR-GILPDVVTYSSIIAALCK 248
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLA 188
++ D + + V+PD T + ++ + + K A L+ +DG E ++
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF---- 244
++S M K +++ M G+ D Y +++ Y G ++ AL
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368
Query: 245 -------------LEC---KSRKLDS-----TPFSTH-------MYKILCDSLGKSGRAF 276
L C K K+D + H Y + D L KSG
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+A+ +F M ++G+ + +Y SLI + + AEEL E ++G+ + ++
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSII 488
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+ +EG V ++ + + M +K +++G A K+ ++S G
Sbjct: 489 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVK 548
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P VTY ++IN YCR++ A +F EM G ++ Y+ ++ T R A L
Sbjct: 549 PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 608
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKN--LRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ G + + YN ++ HG KN + ++++ + + + ++ +I A
Sbjct: 609 YVSITKSGTQLELSTYNIIL--HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ D + NG V D +M + +EEL L M+ G D
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADS 726
Query: 575 RLYHSAMNALRDAG 588
R+ +S + L G
Sbjct: 727 RMLNSIVRKLLQRG 740
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/451 (18%), Positives = 184/451 (40%), Gaps = 2/451 (0%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTI 206
V P HT + L+ C RA + + L + G + + F + G +
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 207 -LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+V +M G + D Y +++ S++ L + +P Y +
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ K G + +A + +M ++GIL D Y+S+I + + A E+ + G+
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ D ++ Y G ++ + ++ M++ ++ + +++N K A K
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+++ + +G P TY +++ Y + + M + G ++ ++ Y
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K ++ AM + +KM+ G PNV Y +++D+ ++ ++ +++M +TP+ +
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
YT++I ++D + E G ++ ++ K ++ E KL M
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
G K D Y++ ++ AG +A L
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 215/480 (44%), Gaps = 11/480 (2%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
+I+ L + K+ D S+ + + PD T S ++ +++ A +L+ + G
Sbjct: 231 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 290
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ +NS + GY+ M+ ++ V+++M S G++ + A +K G + +
Sbjct: 291 TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAK 350
Query: 242 ALF--LECKSRKLDSTPFST--HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
+F + K K D +ST H Y DS + F M KGI + ++
Sbjct: 351 CIFDSMVLKGPKPDIISYSTMLHGYATATDSC-----LADVHNIFNLMLTKGIAPNKHVF 405
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
LI ++A + A +F++ + KGM+ D ++ G ++ L M +
Sbjct: 406 NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVD 465
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY-ASIINAYCRIALYS 416
+ S+ + ++ G A ++ +++++ P V Y +SIIN C+ +
Sbjct: 466 IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVA 525
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ + + M Q G VV ++S++ Y G + +A L+ M + G EPN +IY +L+
Sbjct: 526 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 585
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D + + + ++++M + V P V Y+ ++ +AR K ++E +G
Sbjct: 586 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 645
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ G+++G + + +E LL+ + + K D ++ ++A+ G + +A+ L
Sbjct: 646 VSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKEL 705
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 187/472 (39%), Gaps = 17/472 (3%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP T LI S W+ V + + V+P C+ + + + + A
Sbjct: 292 RPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKC 351
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKL--HMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ + G + ++++++ + GY ++ M + GI + + ++ A
Sbjct: 352 IFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 411
Query: 231 YYKIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
Y + G +K +F + +++ + D+ F+T + SL + GR +AL F M +
Sbjct: 412 YARCGMMDKAMLIFEDMQNKGMIPDTVTFAT-----VISSLCRIGRLDDALHKFNHMVDI 466
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK----LVLMYIEEGL 344
G+ ++Y LI + E+ A+EL E K + P +K ++ +EG
Sbjct: 467 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDI---PPPGVKYFSSIINNLCKEGR 523
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V + D+++ M + + +++ G+ A + + + S G P Y +
Sbjct: 524 VAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 583
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+++ YC+ A VF +M KG V YS ++ + R A + +M G
Sbjct: 584 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 643
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
++ Y ++ R + L +++ V D +++ VISA +
Sbjct: 644 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 703
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ ++ G V + +M+ K EE L ++ G D RL
Sbjct: 704 ELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRL 755
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 108/260 (41%), Gaps = 41/260 (15%)
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
D S +++ GF K A ++ +++ QG +P + SII C++ KAE +
Sbjct: 190 DDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQ 249
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD------ 477
+M G + YS ++ K+ + A ++ +M G PN YNSL+
Sbjct: 250 KMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISG 309
Query: 478 ---------------------------MHGRAKNLRQVEK--LWKEMERRKVTPDKVSYT 508
+H K+ R E ++ M + PD +SY+
Sbjct: 310 MWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYS 369
Query: 509 TVISAYNRAREFDMCV----KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
T++ Y A D C+ +N G ++ + I++ +++ +++ + + +D
Sbjct: 370 TMLHGY--ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 427
Query: 565 MKSEGTKLDERLYHSAMNAL 584
M+++G D + + +++L
Sbjct: 428 MQNKGMIPDTVTFATVISSL 447
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 202/439 (46%), Gaps = 8/439 (1%)
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKI-ANTLLQVFITDG-E 183
YL +K +IV L+ K+ +P + + ++ S VR RK I A + + I G
Sbjct: 144 YLNFIEKALNIVDLA---KLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVS 200
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
+ + ++N + G+ + +E+M+ + + Y ++ AY K+ +++
Sbjct: 201 LNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKL---KRIDEA 257
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
F +S L+ + Y ++ + L + GR E +M KG D Y +L+
Sbjct: 258 FKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNG 317
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ + A L E G+ D L+ + G + + ++ + M L+ +
Sbjct: 318 YCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPN 377
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+++NGFS++ A ++++++I G P VTY +++N +C +A +
Sbjct: 378 GVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLR 437
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M+ KG VV+YS+++A + + + A + A+M KG P+ Y+SL+ +
Sbjct: 438 GMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQR 497
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
L + L++EM + + PD+ +YT++I+ Y + + + + ++E G + D
Sbjct: 498 RLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYN 557
Query: 544 IMVGVFSKLSQIEELVKLL 562
+++ +K ++ E +LL
Sbjct: 558 VLINGLNKQARTREAKRLL 576
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 169/389 (43%), Gaps = 3/389 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY +M ++G+ L+ Y ++ + G+ E F E + + + Y +
Sbjct: 190 VYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVT---YNTVIG 246
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ K R EA K R M +G+ + Y +I + ++ + E + KG
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D LV Y + G + L + M L +++N K A++ +
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF 366
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+Q+ +G P VTY S+IN + + +A +++ EM + GF +V Y++++ + +
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVS 426
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR+ +A+ L+ M+ KG P+V Y++++ R + L + ++ EM + V+PD ++Y
Sbjct: 427 GRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITY 486
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+++I R + + E + D ++ + K + E + L +M
Sbjct: 487 SSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIK 546
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+G D Y+ +N L +A+ L
Sbjct: 547 KGFLPDTVTYNVLINGLNKQARTREAKRL 575
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/508 (19%), Positives = 209/508 (41%), Gaps = 58/508 (11%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +I + K+ D L + + P+ T + ++ R + + + +
Sbjct: 236 PNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGV 295
Query: 175 L-----QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
L + F DG + +N+ + GY K+ ++ ++++ +M G+ D Y ++
Sbjct: 296 LAEMDRKGFAPDG----VTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLIN 351
Query: 230 AYYKIGDSEKVAALFLECKSRKLDST--------------------------------PF 257
K G+ + F + R L P
Sbjct: 352 TMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPP 411
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ Y L + SGR EA+ R M+ KG+ D Y+++I F E+ A ++
Sbjct: 412 TIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMN 471
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E EKG+ D L+ E+ + + D+ + M N L + +++NG+ K
Sbjct: 472 AEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKE 531
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM-------QQKGF 430
A+ +++++I +G +P VTY +IN + A +A+++ +++ +
Sbjct: 532 GDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITY 591
Query: 431 DKCV-----VAYSSMVAM---YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
D + + + S+VA+ + G + +A + M + +PN +YN ++ H R
Sbjct: 592 DTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRD 651
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISA-YNRAREFDMCVKFYNEFRMNGGVIDRAI 541
N+ + KL+KEM P V+ ++ A Y+ + + + + R + + D +
Sbjct: 652 GNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILR-SCKLSDAEL 710
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ +V + K I+ + LL +M +G
Sbjct: 711 SKALVQINHKEGNIDAVFNLLTEMAKDG 738
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 1/251 (0%)
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSK-RRGYWAAVKVYEQLISQGCIPGQVTY 402
+EK L++V+ K AI++ + R+ A KVY ++I+ G +Y
Sbjct: 147 FIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSY 206
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+I +C + F EM++ VV Y++++ Y K RI +A L+ M
Sbjct: 207 NILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGL 266
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
+G EPN+ YN +++ R + + + EM+R+ PD V+Y T+++ Y + F
Sbjct: 267 EGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQ 326
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ ++E NG D ++ K + ++ M G + + Y S +N
Sbjct: 327 ALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLIN 386
Query: 583 ALRDAGLQMQA 593
G +A
Sbjct: 387 GFSQKGFMDEA 397
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/529 (21%), Positives = 220/529 (41%), Gaps = 46/529 (8%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQE-LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
+PD +++ L G+ + ++QE L + + P+ + ++ + D
Sbjct: 160 IPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDK 219
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMG 194
S + +LPD T S ++A+ +A+ A +L + +G + + +NS +
Sbjct: 220 AYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 279
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
GY I +KM+S G+ + Y +M
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLM-------------------------- 313
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
LC K+GR+ EA K F M ++G+ D + Y +L+ +A+ +
Sbjct: 314 --------NYLC----KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
L G+ D V L+ Y ++ V++ + V M+ L + +++
Sbjct: 362 ALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 421
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A+ +EQ+I +G P + Y S+I+ C + KAE++ +EM +G
Sbjct: 422 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNT 481
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ ++S++ + K GR+ ++ L M G +P++ YN+L+D A + + KL
Sbjct: 482 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG---GVIDRAIAGIMVGVFSK 551
M V PD V+Y T+I+ Y R D + + E +G +I I I+ G+F
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI--ILQGLFHT 599
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ +L + GT+L+ Y+ ++ L L +A + QN
Sbjct: 600 -RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 117/554 (21%), Positives = 221/554 (39%), Gaps = 39/554 (7%)
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
D + PD +++ L+G K+ + + AY Y+E P+ T +I L +
Sbjct: 191 DDRGGGSPPDVVSYNTVLNGFFKEGDSDK-AYSTYHEMLD-RGILPDVVTYSSIIAALCK 248
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLA 188
++ D + + V+PD T + ++ + + K A L+ +DG E ++
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF---- 244
++S M K +++ M G+ D Y +++ Y G ++ AL
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368
Query: 245 -------------LEC---KSRKLDS-----TPFSTH-------MYKILCDSLGKSGRAF 276
L C K K+D + H Y + D L KSG
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+A+ +F M ++G+ + +Y SLI + + AEEL E ++G+ + ++
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSII 488
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+ +EG V ++ + + M +K +++G A K+ ++S G
Sbjct: 489 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVK 548
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P VTY ++IN YCR++ A +F EM G ++ Y+ ++ T R A L
Sbjct: 549 PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 608
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKN--LRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ G + + YN ++ HG KN + ++++ + + + ++ +I A
Sbjct: 609 YVSITKSGTQLELSTYNIIL--HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ D + NG V D +M + +EEL L M+ G D
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADS 726
Query: 575 RLYHSAMNALRDAG 588
R+ +S + L G
Sbjct: 727 RMLNSIVRKLLQRG 740
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/451 (18%), Positives = 184/451 (40%), Gaps = 2/451 (0%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTI 206
V P HT + L+ C RA + + L + G + + F + G +
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 207 -LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+V +M G + D Y +++ S++ L + +P Y +
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ K G + +A + +M ++GIL D Y+S+I + + A E+ + G+
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ D ++ Y G ++ + ++ M++ ++ + +++N K A K
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+++ + +G P TY +++ Y + + M + G ++ ++ Y
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K ++ AM + +KM+ G PNV Y +++D+ ++ ++ +++M +TP+ +
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
YT++I ++D + E G ++ ++ K ++ E KL M
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
G K D Y++ ++ AG +A L
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 127/592 (21%), Positives = 231/592 (39%), Gaps = 94/592 (15%)
Query: 62 FPTIELNRDSHHQTAVPDAKKFDSFLHGMLKD----PQTQELA------------YDYYN 105
F + L+R+ HH TA F +H +L++ P + L ++ +
Sbjct: 90 FNFLGLHRNFHHSTA-----SFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFF 144
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
E+ K +F S +LI++ VQ+K+ V + + Y +LP+ T S L+ + R
Sbjct: 145 ESYKKYKF-SSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARI 203
Query: 166 RKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
RKF+ +L++F T + +AG+ D Y
Sbjct: 204 RKFR---QVLELFDT-------------------------------LVNAGVKPDCYIYT 229
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+++ ++ D K + + + + S Y + + L KS R +EA++ R +
Sbjct: 230 VVVKCLCELKDFNKAKEIINQAEG---NGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSL 286
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
EKG+ D Y +L+ I E ++ E+ E E G + L+ I+ G +
Sbjct: 287 GEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSI 346
Query: 346 EKTLD---------------VVESMKNA--------------------KLKISDCISCAI 370
E + V SM N+ L +D +
Sbjct: 347 EGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTIL 406
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++GF +R A + ++I G +Y S+IN C+ AE +F EM KG
Sbjct: 407 IDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGL 466
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
V Y+S+++ Y K G + A L +M KG PN + +L+ + + + K
Sbjct: 467 KPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASK 526
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L+ EM K+ P++V+Y +I + R + +E G D ++
Sbjct: 527 LFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLC 586
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
++ E + + D+ + +LDE Y + + G +A +Q G
Sbjct: 587 STGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVG 638
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 200/480 (41%), Gaps = 7/480 (1%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
T + I L +SK+ V + + D T LV R ++F++ ++
Sbjct: 262 TYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEM 321
Query: 179 ITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
I G + + A + + G K+ + K+ G+V + Y ++ + K G
Sbjct: 322 IELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKL 381
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
E+ LF R L+ + Y IL D G+ + A +F M E GI Y
Sbjct: 382 EEAELLFSVMAERGLNPNDVT---YTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSY 438
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
S+I ++K+AE LFKE +KG+ L+ Y ++GLV K + M
Sbjct: 439 NSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTG 498
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ + A++ G + A K++++++ +P +VTY +I +CR ++
Sbjct: 499 KGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTR 558
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A ++ EM +KG Y ++A TGR+ +A + + K + Y +L+
Sbjct: 559 AFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQ 618
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS-AYNRAREFDMCVKFYNEFRMNGGV 536
+ +++ +EM R + D VSY +IS A N+ + + E G
Sbjct: 619 GFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDR--ILFELLREMHGKGMQ 676
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
D I I++ F K +++ + M EG + Y + +N L AG +A+ L
Sbjct: 677 PDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLL 736
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 106/555 (19%), Positives = 210/555 (37%), Gaps = 43/555 (7%)
Query: 76 AVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
VP+ ++S ++ + K + +E + A++ P T +LI + K D
Sbjct: 361 VVPNLFVYNSMINSLCKTGKLEEAELLFSVMAER--GLNPNDVTYTILIDGFGRRAKLDV 418
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA-FNSAMG 194
+ ++ + ++ + K K+A L + + G +A + S +
Sbjct: 419 AFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLIS 478
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
GY K + +Y +M GI ++ + ++ +I + + LF E K+
Sbjct: 479 GYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILP 538
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+ Y +L + + G A + +M +KG+ D Y LI S V A+
Sbjct: 539 NEVT---YNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAK 595
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLM-YIEEGLVEKTL------------------------ 349
E + K D E+C +L + +EG +++ L
Sbjct: 596 EFINDLHHKHQRLD-ELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG 654
Query: 350 ----------DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+++ M ++ + I +++GF K A + + +I +G +P
Sbjct: 655 ALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNS 714
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
VTY +++N + ++A+ +F M + Y + K G + +A+ L
Sbjct: 715 VTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNA 774
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M +G N YN L+ + + ++ KL M + PD ++Y+T I Y +
Sbjct: 775 M-LQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGN 833
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
D + + G DR + ++ +++ ++L DM G K + YHS
Sbjct: 834 VDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHS 893
Query: 580 AMNALRDAGLQMQAQ 594
M L Q Q
Sbjct: 894 LMVQLAQRARLTQVQ 908
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 163/355 (45%), Gaps = 3/355 (0%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y IM Y G SEK +F + S ++ + Y L D L K+G+ EA K F
Sbjct: 80 YNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVT---YNSLMDYLCKNGKCTEARKIFD 136
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
M ++G+ D + Y +L+ +AS + +L + GM D V L+ Y ++
Sbjct: 137 SMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQE 196
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
V++ + V M+ L + +++G K A+ +EQ+I +G P V Y
Sbjct: 197 KVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYT 256
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
S+I+A C + KAE++ E+ +G + +V +++++ K GR+ ++ L +
Sbjct: 257 SLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHI 316
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
G P+V Y++L+D + A + KL M + PD V+Y+T+I+ Y + +
Sbjct: 317 GVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDA 376
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ + E NG D I++ + + +L + GT+L+ Y+
Sbjct: 377 LALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYN 431
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/415 (20%), Positives = 164/415 (39%), Gaps = 38/415 (9%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTIL 207
V PDA T + ++A+ +A+ A +L V + +NS M GY I
Sbjct: 42 VSPDAVTYNSIIAALSKAQAMDRAMEVLTVMVMPN---CFTYNSIMHGYCSSGQSEKAIG 98
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFST------ 259
++ KM S GI D Y +M+ K G + +F R L D T + T
Sbjct: 99 IFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYA 158
Query: 260 ------------------------HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
H++ IL + K + E + F M+++G+ +
Sbjct: 159 SKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAV 218
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
Y ++I + + A F++ +KG+ + V L+ EK +++ +
Sbjct: 219 NYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEI 278
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+ + + I++ K + K+++ L G P +TY+++I+ YC
Sbjct: 279 LDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKM 338
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
A K+ M G V YS+++ Y K R+ DA+ L +M++ G P++ YN +
Sbjct: 339 DGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNII 398
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM---CVKFY 527
+ R + ++L+ + + +Y ++ + + M C + Y
Sbjct: 399 LHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHFGCFRTY 453
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 92/225 (40%), Gaps = 31/225 (13%)
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA------------ 442
C P V+Y +II+ + KA + EM + V Y+S++A
Sbjct: 7 CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66
Query: 443 -----------------MYG--KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M+G +G+ A+ + KM + G EP+V YNSLMD +
Sbjct: 67 EVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNG 126
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ K++ M +R + PD +Y T++ Y NG +D +
Sbjct: 127 KCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFN 186
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
I++ ++K +++E+V + M+ +G + Y + ++ L G
Sbjct: 187 ILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLG 231
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 180/442 (40%), Gaps = 74/442 (16%)
Query: 199 LHMYYSTILVY-------------EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+H+Y S I Y E+M S GI L+ +C I+ Y G++E F
Sbjct: 166 VHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFE 225
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ K+ L P +Y + + ++G M+E+G + +Y +++ FA
Sbjct: 226 KFKAENL--VPGGI-VYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFA 282
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKL---VLMYIEEGLVEKTLDVVESMKNAKLKI 362
I RD E CL + + + G + K LD++E M +
Sbjct: 283 EI-------------------RDEEKCLSFFHRLKVSPQAGNMAKALDILEEMDKHGVSP 323
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
+ I I++G+++ + AA KV+E ++S G P V Y +++A+C+ KA V
Sbjct: 324 NKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVL 383
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
++ + Y+S++ Y K G I+ A+ + ++K G P V YNSL+ +A
Sbjct: 384 ENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKA 443
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
+ + + EM V P + YT + Y R + + + + ID
Sbjct: 444 RQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAY 503
Query: 543 GIMV------------------------------------GVFSKLSQIEELVKLLQDMK 566
G ++ G +++ ++EE +L+ M+
Sbjct: 504 GALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAME 563
Query: 567 SEGTKLDERLYHSAMNALRDAG 588
+GTK D +Y+S +NA +G
Sbjct: 564 RDGTKPDTLIYNSLINAYGVSG 585
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 152/323 (47%), Gaps = 7/323 (2%)
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
M GY + + + V+E M SAG+ D Y ++ A+ K G +K + ++ +L
Sbjct: 332 MDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRL 391
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
T Y + D K G +AL+ F +K G+ Y SL+ A +++
Sbjct: 392 LPT---IETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMEN 448
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A + E G++ + L Y G VEK V + MK L I A++
Sbjct: 449 ARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLK 508
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN-AYCRIALYSKAEKVFIEMQQKGFD 431
A +V++Q+ G Q+TY ++++ AY R +AE++ M++ G
Sbjct: 509 ACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTK 568
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKM---KAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
+ Y+S++ YG +GR D L+AKM +K +P++ YN+L+ ++ +A + +
Sbjct: 569 PDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRA 628
Query: 489 EKLWKEMERRKVTPDKVSYTTVI 511
E+L++ + R K+ PD ++T ++
Sbjct: 629 EELFQGLARLKLVPDATTWTALM 651
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/469 (20%), Positives = 196/469 (41%), Gaps = 58/469 (12%)
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNV-LPDAHTCSRLVASCVR 164
EA + +P LI +++ + V+ +E+ + L +A CS +++
Sbjct: 155 EAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCS-IISGYAS 213
Query: 165 ARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGC 223
A + A + F + + + +NS + Y + + + +M+ G + G
Sbjct: 214 AGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGL 273
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKS--------------RKLDSTPFSTH--MYKILCD 267
Y ++ + +I D EK + F K ++D S + +Y ++ D
Sbjct: 274 YTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALDILEEMDKHGVSPNKMIYAMIMD 333
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ G A K + DM G+ D IY L+ +F + A + + E +L
Sbjct: 334 GYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLP 393
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
E ++ Y++ G ++K L+V + +K A L+ ++++G +K R A +
Sbjct: 394 TIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLML 453
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV------ 441
++++ G +P + Y ++ Y R KA VF M+++ +VAY +++
Sbjct: 454 NEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNS 513
Query: 442 -AMYG-----------------------------KTGRIRDAMWLVAKMKAKGCEPNVWI 471
AM+G + GR+ +A LV+ M+ G +P+ I
Sbjct: 514 GAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPDTLI 573
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMER---RKVTPDKVSYTTVISAYNRA 517
YNSL++ +G + +E L +M + ++ PD +Y T+I Y +A
Sbjct: 574 YNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQA 622
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+V+ +++ AA +E + + P Y S+I+AY A EM +G
Sbjct: 137 LVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQG 196
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ S+++ Y G A K KA+ P +YNS++ + +A N+ VE
Sbjct: 197 IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVE 256
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM----------------- 532
L +ME + YTTV++ + R+ + C+ F++ ++
Sbjct: 257 ALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALDILEEM 316
Query: 533 --NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
+G ++ I +++ +++ K+ +DM S G K D +Y+ ++A AG
Sbjct: 317 DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRM 376
Query: 591 MQAQWLQQNFE 601
+A + +N E
Sbjct: 377 DKALGVLENIE 387
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Query: 430 FDKCVV-AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
DK V+ Y +V Y + G A M+A +PNV IY SL+ + A+++
Sbjct: 126 IDKPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGA 185
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+EM + + ++ + ++IS Y A + ++ +F+ V + +V
Sbjct: 186 VACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQA 245
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + +E + LL M+ EG + + LY + +N
Sbjct: 246 YCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGF 281
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/483 (21%), Positives = 214/483 (44%), Gaps = 19/483 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +++R L D VSL + V PD T S L++ + + A L
Sbjct: 156 PNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDL 215
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKM-KSAGIVLDSGCYCQIMEAYY 232
L G + + +N+ + G + M+ + V+E++ + G + Y +++
Sbjct: 216 LDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLC 275
Query: 233 KIGDSEKVAALFLECKSRKL-DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K+G ++ E SR + ++ T Y IL L +SG A + + DM + G++
Sbjct: 276 KLGRFKEAG----EVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLV 331
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
D S+Y SLI F + A + + G +R + ++ G+V + ++
Sbjct: 332 LDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSG-IRQITTYNIMTKGLLDSGMVSEATEL 390
Query: 352 VESMKNA------KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
++ ++N K+ I NG++ R A ++ E + G +Y+S+
Sbjct: 391 LKQLENDASCSPDKVTFGTLIHGLCENGYANR-----AFEILEDARNSGEELDVFSYSSM 445
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
IN +C+ A +V+ M + G Y++++ + + +I DA+ + +M + GC
Sbjct: 446 INRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGC 505
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
P + YN+L+D +A+ ++ L KEM R PD +Y ++I R ++ D+ ++
Sbjct: 506 CPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALR 565
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
++E G +D + I++ +++E + +MK + + Y++ M+
Sbjct: 566 IWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFY 625
Query: 586 DAG 588
+ G
Sbjct: 626 EIG 628
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/497 (20%), Positives = 192/497 (38%), Gaps = 85/497 (17%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T L+ L + + D+ + L ++ Y V DA + L++ C R F+ A +
Sbjct: 191 PDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKV 250
Query: 175 LQVFITDGEIA--LLAFNSAMGGYNKLHMY---------------------YSTIL---- 207
+ + D + L + + G KL + Y ++
Sbjct: 251 WEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLC 310
Query: 208 ----------VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
VY M AG+VLD Y +++ + ++G + + + DST F
Sbjct: 311 RSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFW--------DSTGF 362
Query: 258 S----THMYKILCDSLGKSGRAFEALKFFRDMK-EKGILEDPSIYASLICSFASITEVKL 312
S Y I+ L SG EA + + ++ + D + +LI
Sbjct: 363 SGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANR 422
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A E+ ++A G D ++ + ++G +V ++M K + + A++N
Sbjct: 423 AFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALIN 482
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
GF + A+K+Y ++ S GC P +TY ++I+ C+ Y +A + EM ++GF
Sbjct: 483 GFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKP 542
Query: 433 CVVAYSSM---------------------------------VAMYG--KTGRIRDAMWLV 457
+ Y+S+ + ++G G++ +A +
Sbjct: 543 DIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIY 602
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+MK K C PN+ YN+LMD ++ + LW + + PD V+Y T I
Sbjct: 603 LEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSC 662
Query: 518 REFDMCVKFYNEFRMNG 534
V NE G
Sbjct: 663 NRTPEGVLLLNEVLATG 679
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 114/269 (42%), Gaps = 3/269 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ E +++G LD Y ++ + K G + ++ K+ D ++H+Y L +
Sbjct: 426 ILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVY---KNMVKDGCKPNSHVYNALIN 482
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ + +A+K + +M G Y +LI + + A L KE E+G
Sbjct: 483 GFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKP 542
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ + V+ L + + + +A L++ + +++G A +Y
Sbjct: 543 DIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIY 602
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
++ + C P VTY ++++ + I KA ++ + G +V Y++ +
Sbjct: 603 LEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSC 662
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
R + + L+ ++ A G P V ++ L+
Sbjct: 663 NRTPEGVLLLNEVLATGIMPTVITWSILV 691
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/347 (18%), Positives = 141/347 (40%), Gaps = 11/347 (3%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKE----KGILEDPSIYASLICSFASITEVKLAEELF 317
+ L D+ ++ R +A FF + + I + Y ++ S + +V A LF
Sbjct: 122 HNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLF 181
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+G+ D L+ + ++ LD+++ M N ++ A+++G +
Sbjct: 182 SSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRT 241
Query: 378 RGYWAAVKVYEQLI-SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A+KV+EQL+ G P TY +++ C++ + +A +V+ M V
Sbjct: 242 GMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVT 301
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y ++ ++G + A + + M G +V +YNSL+ + K W
Sbjct: 302 YGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTG 361
Query: 497 ---RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
R++T + ++ + + ++ + N+ + D+ G ++ +
Sbjct: 362 FSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSP---DKVTFGTLIHGLCENG 418
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
++L+D ++ G +LD Y S +N G A + +N
Sbjct: 419 YANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNM 465
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 102/234 (43%), Gaps = 6/234 (2%)
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ-GCIPGQVTYASIINAYCRIALYSKAE 419
+ S+ + +++ FS+ AA+ + L S GC PG ++ ++++A+ R YS A+
Sbjct: 80 RFSESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDAD 139
Query: 420 KVFIEMQQKGFDKCVV----AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
F + F + + Y+ ++ G + A+ L + ++ +G P+ Y++L
Sbjct: 140 AFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTL 199
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF-RMNG 534
M + L L EM V D V Y ++S R F+ +K + + R G
Sbjct: 200 MSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPG 259
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ A +M+ KL + +E ++ M + + D Y ++ L +G
Sbjct: 260 ASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSG 313
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 108/269 (40%), Gaps = 3/269 (1%)
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
E+ + +++S + + K + VY+ M G +S Y ++ + ++
Sbjct: 436 ELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIK 495
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
+++E S T + Y L D L K+ + EA ++M E+G D YASLI
Sbjct: 496 IYIEMTSNGCCPTIIT---YNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIR 552
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+V +A ++ E + G+ D V L+ G V++ + MK
Sbjct: 553 GLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSP 612
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
+ +++GF + A ++ ++ G P VTY + I C + +
Sbjct: 613 NLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLL 672
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
E+ G V+ +S +V K G I+
Sbjct: 673 NEVLATGIMPTVITWSILVRAVIKYGPIQ 701
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 189/404 (46%), Gaps = 5/404 (1%)
Query: 181 DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
D IA+ +++ M GY + ++V++++K G Y ++ Y K+G K+
Sbjct: 446 DAPIAI--YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVG---KI 500
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
+ + K + + Y ++ + K A F DM ++G+ D +Y ++
Sbjct: 501 SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 560
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
I +F + + A + KE ++ + ++ Y + G + ++L+V + M+
Sbjct: 561 ISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 620
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ ++NG ++R AV++ +++ G + TY I+ Y + KA +
Sbjct: 621 VPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 680
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
F +Q +G D + Y +++ K+GR++ A+ + +M A+ N ++YN L+D
Sbjct: 681 YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 740
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
R ++ + L ++M++ V PD +YT+ ISA ++A + + + E G +
Sbjct: 741 RRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIK 800
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ +++ S E+ + ++MK+ G K D+ +YH + +L
Sbjct: 801 TYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 184/452 (40%), Gaps = 75/452 (16%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC-KSRKLDSTPFSTHMYKILC 266
+E+M++ GI S Y ++ AY D ++ L C + K + S Y ++
Sbjct: 331 TFERMRARGITPTSRIYTSLIHAYAVGRDMDEA----LSCVRKMKEEGIEMSLVTYSVIV 386
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG-- 324
K+G A A +F + K + SIY +I + ++ AE L +E EE+G
Sbjct: 387 GGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGID 446
Query: 325 --------------MLRDPE---VCLK----------------LVLMYIEEGLVEKTLDV 351
M+ D + V K L+ +Y + G + K L+V
Sbjct: 447 APIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 506
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
MK +K + ++NGF K + + A V+E ++ +G P + Y +II+A+C
Sbjct: 507 SRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCG 566
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ +A + EMQ+ + ++ Y K+G +R ++ + M+ GC P V
Sbjct: 567 MGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHT 626
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+N L++ + + + ++ EM V+ ++ +YT ++ Y + +++ +
Sbjct: 627 FNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 686
Query: 532 MNG------------------GVIDRAIA-----------------GIMVGVFSKLSQIE 556
G G + A+A I++ +++ +
Sbjct: 687 NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW 746
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E L+Q MK EG K D Y S ++A AG
Sbjct: 747 EAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 161/359 (44%), Gaps = 5/359 (1%)
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y + GD + F ++R + TP ++ +Y L + EAL R MKE+GI
Sbjct: 319 YGRRGDMHRARETFERMRARGI--TP-TSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGI 375
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
Y+ ++ F+ + A+ F EA+ + + K++ + + +E+
Sbjct: 376 EMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEA 435
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+V M+ + I +++G++ + V+++L G P VTY +IN Y
Sbjct: 436 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYT 495
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
++ SKA +V M+++G + YS M+ + K +A + M +G +P+V
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+YN+++ N+ + + KEM++ + P ++ +I Y ++ + ++ ++
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 531 RMNGGVID-RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
R G V G++ G+ K Q+E+ V++L +M G +E Y M G
Sbjct: 616 RRCGCVPTVHTFNGLINGLVEK-RQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 673
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 160/372 (43%), Gaps = 6/372 (1%)
Query: 108 KKLPE--FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
K+L E F P T LI + K + +S K V + T S ++ V+
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 166 RKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
+ + A + + + +G + ++ +N+ + + + I ++M+ + +
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
I+ Y K GD + +F R+ P + H + L + L + + +A++ +
Sbjct: 593 MPIIHGYAKSGDMRRSLEVF--DMMRRCGCVP-TVHTFNGLINGLVEKRQMEKAVEILDE 649
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M G+ + Y ++ +AS+ + A E F + +G+ D L+ + G
Sbjct: 650 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 709
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
++ L V + M + + + +++G+++R W A + +Q+ +G P TY S
Sbjct: 710 MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTS 769
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
I+A + ++A + EM+ G + Y++++ + + A+ +MKA G
Sbjct: 770 FISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMG 829
Query: 465 CEPNVWIYNSLM 476
+P+ +Y+ L+
Sbjct: 830 IKPDKAVYHCLL 841
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/182 (18%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ ++I+A+ +I+ S+ E + MV YG+ G + A +M+
Sbjct: 294 WQAVISAFEKISKPSRTE-----------------FGLMVKFYGRRGDMHRARETFERMR 336
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
A+G P IY SL+ + +++ + ++M+ + V+Y+ ++ +++A +
Sbjct: 337 ARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAE 396
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+++E + ++ +I G ++ + +E L+++M+ EG +YH+ M
Sbjct: 397 AADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMM 456
Query: 582 NA 583
+
Sbjct: 457 DG 458
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 91/239 (38%), Gaps = 38/239 (15%)
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
W AV + IS+ P + + ++ Y R +A + F M+ +G Y+S+
Sbjct: 294 WQAVISAFEKISK---PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSL 350
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEP--------------------------------- 467
+ Y + +A+ V KMK +G E
Sbjct: 351 IHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHK 410
Query: 468 --NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
N IY ++ H + N+ + E L +EME + Y T++ Y + +
Sbjct: 411 TLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV 470
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + G G ++ +++K+ +I + +++ + MK EG K + + Y +N
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 529
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 208/468 (44%), Gaps = 12/468 (2%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIY---NVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
LLIR VQ++K + SE F++ + C+ L+ + V+ +A + + F
Sbjct: 159 LLIRTYVQARK---LREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215
Query: 179 ITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
+ G I + N + K + + +M+ G+ D Y ++ AY + G
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275
Query: 238 EKVAALFLECKSRK-LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+ L ++C + K L F+ Y L + L K G A + +M G+ + +
Sbjct: 276 SEAFGL-VDCMAGKGLKPGLFT---YNALINGLCKEGSYERAKRVLDEMLGVGLCPNAAT 331
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
+ ++ +V AE +F E ++G++ D +V ++ G + + L E MK
Sbjct: 332 FNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMK 391
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
L I ++NG+ + A+K+ +++ +GC+ VTY +++N CR +
Sbjct: 392 GVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLD 451
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
A+++F EM ++G ++++ Y K G + A+ L M + +P+V YN+LM
Sbjct: 452 DADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLM 511
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D + + + ++LW +M R++ P +S++ +I+ + + ++E + G
Sbjct: 512 DGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIK 571
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ + + + + L M SEG D Y++ +N+
Sbjct: 572 PTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSF 619
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 153/309 (49%), Gaps = 3/309 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ +M G+V D + I+ + + G+ + A F + K L P T +Y IL +
Sbjct: 351 VFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGL--VP-DTVIYTILIN 407
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
++ ALK +M E+G + D Y +L+ + A+ELFKE E+G+
Sbjct: 408 GYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFP 467
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ Y ++G + K L + E+M LK +++GF K A +++
Sbjct: 468 DFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELW 527
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+IS+ P ++++ +IN +C + L S+A +++ EM++KG +V ++++ Y +
Sbjct: 528 YDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRA 587
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G + A + M ++G P+ YN+L++ + +N + L ME R + P+ V+Y
Sbjct: 588 GNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTY 647
Query: 508 TTVISAYNR 516
++ ++R
Sbjct: 648 NAILGGFSR 656
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 126/280 (45%)
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E EEKG+ D LV Y GLV + +V+ M LK A++NG K
Sbjct: 247 LSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCK 306
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
Y A +V ++++ G P T+ ++ CR +AE+VF EM Q+G +++
Sbjct: 307 EGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLIS 366
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
+SS+V ++ + G + A+ KMK G P+ IY L++ + R ++ K+ EM
Sbjct: 367 FSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMV 426
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
R D V+Y T+++ R + D + + E G D ++ + K +
Sbjct: 427 ERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMT 486
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + L + M K D Y++ M+ G +A+ L
Sbjct: 487 KALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKEL 526
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 60/125 (48%)
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
V +++ L+ + +A+ LR+ + ++ + +R + ++ A + D+ K Y
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+F +G +++ IMV K +++ + L +M+ +G D Y++ +NA G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 589 LQMQA 593
L +A
Sbjct: 274 LVSEA 278
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
V + +I Y + + + F ++++GF + A ++++ K G + D W V +
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWV-DLAWKVYE 213
Query: 460 MKAK-GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
K G NV+ N +++ + L V EME + V D V+Y T+++AY R
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCR 271
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 177/383 (46%), Gaps = 3/383 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V M+ AG ++ Y ++ A+ + G+ ++ L + L + + + +
Sbjct: 179 VLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVT---FNSVVN 235
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ K+GR +A K F +M ++G+ D Y +L+ + + A +F E KG++
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMP 295
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ + + G +E+ + +V M+ L++++ A+++GF K+ A+
Sbjct: 296 DVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAV 355
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
++ P V Y ++IN YC + +A ++ EM+ KG VV YS++++ Y K
Sbjct: 356 REMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKN 415
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G A L +M G P+ Y+SL+ + K L L+K M + PD+V+Y
Sbjct: 416 GDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTY 475
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T++I + + + + ++E G + D +++ SK ++ +E +LL +
Sbjct: 476 TSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYH 535
Query: 568 EGTKLDERLYHSAMNALRDAGLQ 590
E Y + M R+A L+
Sbjct: 536 EEPVPANIKYDALMRCCRNAELK 558
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 154/331 (46%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D + + Y IL +L G EAL RDM+ G + Y +L+ +F EV
Sbjct: 151 DGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDR 210
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
AE L E G+ + +V + G +E V + M L +V
Sbjct: 211 AERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVG 270
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G+ K A+ V+ ++ +G +P VT+ S+I+ C+ +A + EM+++G
Sbjct: 271 GYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQM 330
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+ +++++ + K G + DA+ V +M+ +P+V YN+L++ + + + +L
Sbjct: 331 NEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELV 390
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+EME + V PD V+Y+T++SAY + + + + NG + D ++ V +
Sbjct: 391 REMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEE 450
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++ + L ++M S G + DE Y S ++
Sbjct: 451 KRLGDAHVLFKNMISLGLQPDEVTYTSLIDG 481
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 176/404 (43%), Gaps = 39/404 (9%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +L+R L +S+ D + P+A T + LVA+ RA + A L
Sbjct: 155 PNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERL 214
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + G + L+ FNS + G K V+++M G+ D Y ++ Y K
Sbjct: 215 VDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCK 274
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G S EAL F +M KGI+ D
Sbjct: 275 VGCSH--------------------------------------EALSVFAEMTRKGIMPD 296
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ SLI ++ A L +E E+G+ + L+ + ++G ++ L V
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M+ +++ S A++NG+ A ++ ++ ++G P VTY++I++AYC+
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
A ++ +M + G + YSS++ + + R+ DA L M + G +P+ Y
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
SL+D H + N+ + L EM + V PD V+Y+ +I+ +++
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKS 520
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 95/193 (49%)
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+A + ++ ++S G P TY ++ A C +A V +M+ G D V Y+++V
Sbjct: 140 SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLV 199
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
A + + G + A LV M+ G +PN+ +NS+++ +A + K++ EM + +
Sbjct: 200 AAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLA 259
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD VSY T++ Y + + + E G + D ++ V K +E V L
Sbjct: 260 PDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGL 319
Query: 562 LQDMKSEGTKLDE 574
+++M+ G +++E
Sbjct: 320 VREMRERGLQMNE 332
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 35/264 (13%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+V R A+ V + GC P VTY +++ A+CR +AE++ M++ G
Sbjct: 163 LVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGG 222
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+V ++S+V K GR+ DA + +M +G P+ YN+L+ + + +
Sbjct: 223 LKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEAL 282
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG--------------- 534
++ EM R+ + PD V++T++I +A + V E R G
Sbjct: 283 SVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGF 342
Query: 535 ---GVIDRAIAGI-----------------MVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
G +D A+ + ++ + + +++E +L+++M+++G K D
Sbjct: 343 CKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDV 402
Query: 575 RLYHSAMNALRDAGLQMQAQWLQQ 598
Y + ++A G A L Q
Sbjct: 403 VTYSTILSAYCKNGDTHSAFQLNQ 426
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 92/479 (19%), Positives = 185/479 (38%), Gaps = 62/479 (12%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ F+S ++G+ K + ++ A ++E K P+ + L+ + +
Sbjct: 225 PNLVTFNSVVNGICKAGRMED-ARKVFDEMVK-EGLAPDGVSYNTLVGGYCKVGCSHEAL 282
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
S+ + ++PD T + L+ +A + A L++ G ++ + F + + G+
Sbjct: 283 SVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGF 342
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDS 254
K +L +M+ I CY ++ Y +G ++ L +E K K D
Sbjct: 343 CKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDV 402
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+ST + + K+G A + + M E G+L D Y+SLI + A
Sbjct: 403 VTYST-----ILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAH 457
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNG 373
LFK G+ D L+ + +EG VE+ L + + M A + + D ++ ++ +NG
Sbjct: 458 VLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGV-LPDVVTYSVLING 516
Query: 374 FSKR--------------------------------------------RGYW------AA 383
SK +G+ A
Sbjct: 517 LSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEA 576
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
KVY+ ++ + Y+ +I+ +CR KA +M Q GF + S++
Sbjct: 577 DKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRG 636
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ G + +A ++ ++ + +L+D++ + N+ V + M R + P
Sbjct: 637 LFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 123/291 (42%), Gaps = 26/291 (8%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
+LN+ +PDA + S + + ++ + + A+ + L +P++ T LI
Sbjct: 423 QLNQQMLENGVLPDAITYSSLIRVLCEEKRLGD-AHVLFKNMISL-GLQPDEVTYTSLID 480
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEI 184
+ + +SL ++ VLPD T S L+ ++ + K A LL +++ +
Sbjct: 481 GHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVP 540
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
A + +++ M ++KS +L C +M +++KV
Sbjct: 541 ANIKYDALM-----------RCCRNAELKSVLALLKGFCMKGLMN------EADKVYQSI 583
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
L+ ++ LD + +Y +L + G +AL F + M + G + + SLI
Sbjct: 584 LD-RNWNLDGS-----VYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGL 637
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
V A+++ ++ L D E L+ + ++EG V+ LDV+ M
Sbjct: 638 FEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGM 688
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 177/399 (44%), Gaps = 9/399 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V E+M +AG D + +M+ + + + EK ++ S H IL
Sbjct: 32 VLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYH---ILIH 88
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L K G+ E+LK +M +G Y+SL+ + A V A LF E G
Sbjct: 89 GLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHP 148
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D + +L+L + G V+ + + M + + + +++G A ++
Sbjct: 149 DRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLF 208
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
++ S C P VTY ++++A C+ + K+F M+ G+ V+ +S+++ +T
Sbjct: 209 AEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRT 268
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G + A+ + M GC+PN + Y +L+ RA+ + Q +L+++M + + PD V+Y
Sbjct: 269 GELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAY 328
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMK 566
++I+ Y + D K Y E G+ + ++ F KL ++ +L+ +M
Sbjct: 329 NSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMG 388
Query: 567 SEGTKLDERLYHSAMNALR-----DAGLQMQAQWLQQNF 600
++G D Y + L D L++ Q ++ F
Sbjct: 389 TKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKF 427
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 199/493 (40%), Gaps = 44/493 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F+ + G + E A + Y + ++P+ + +LI L + K D +
Sbjct: 43 PDVFAFNGVMQGFARS-NNMEKAREVYQHMVE-SGYKPDNVSYHILIHGLAKIGKLDESL 100
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+ + + P S LV + +AR+ A++L I G L F + G
Sbjct: 101 KILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGL 160
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ +++M G + Y ++ G E+ LF E KS
Sbjct: 161 CQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDV 220
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y L D++ K+ R E K F M+ G + + +++LI
Sbjct: 221 VT---YNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLI--------------- 262
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
G+ R G +EK L+V SM A K + +++G +
Sbjct: 263 ------HGLCRT--------------GELEKALEVFGSMLEAGCKPNKYTYTTLISGLCR 302
Query: 377 RRGYWAAVKVYEQLISQGCIPGQ-VTYASIINAYCRIALYSKAEKVFIEMQQ-KGFDKCV 434
A +++E++ +Q CIP V Y S+I YC+ +AEK++ EM G +
Sbjct: 303 AEKVIQARELFEKM-TQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTI 361
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V +++++ + K G++ A LVA+M KG + Y L+ RA L + +++K+
Sbjct: 362 VTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQ 421
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M +K D VS + + + D + R +G V + I+ KL +
Sbjct: 422 MREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGR 481
Query: 555 IEELVKLLQDMKS 567
+E+ KL++ K+
Sbjct: 482 VEDAQKLMEPAKA 494
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 148/317 (46%), Gaps = 10/317 (3%)
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR---DPEVCLKLVLM--Y 339
M++K I + Y+S+I S + E K EE +K EE M+ +P+V +M +
Sbjct: 1 MRDKNIAANVFTYSSIIKSL--VKEAK-PEESYKVLEE--MMAAGCNPDVFAFNGVMQGF 55
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+EK +V + M + K + +++G +K ++K+ +++ +G P
Sbjct: 56 ARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSM 115
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
Y+S++ A + A +F EM + G + + ++ + G+++DA +
Sbjct: 116 QAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQ 175
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M GC+PNV +YN L+ + L Q L+ EM+ +PD V+Y T++ A +AR
Sbjct: 176 MPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARR 235
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ K + R G V + ++ + ++E+ +++ M G K ++ Y +
Sbjct: 236 VEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTT 295
Query: 580 AMNALRDAGLQMQAQWL 596
++ L A +QA+ L
Sbjct: 296 LISGLCRAEKVIQAREL 312
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 146/341 (42%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y + SL K + E+ K +M G D + ++ FA ++ A E+++
Sbjct: 13 YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 72
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E G D L+ + G ++++L ++ M S ++V +K R
Sbjct: 73 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVD 132
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A +++++I G P ++ + +I C+ A + F +M + G V Y+ ++
Sbjct: 133 HASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLL 192
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+G++ A L A+MK+ C P+V YN+L+D +A+ + + KL++ M
Sbjct: 193 HGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYV 252
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ ++++T+I R E + ++ + G ++ ++ + ++ + +L
Sbjct: 253 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAREL 312
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+ M D Y+S + G +A+ L + G
Sbjct: 313 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSG 353
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/525 (22%), Positives = 214/525 (40%), Gaps = 75/525 (14%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F ++G+ ++ + E A+ A + P+ T + I L ++++ D
Sbjct: 5 PDMVAFTVVINGLCREKRLDE-AFSVLERAVR-AGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALL-AFNSAMGGY 196
L + LP T + LV ++A + A +L+ + G L + + G
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+K ++ M G D+ Y +++ K G E+ AL+ E +RK +T
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182
Query: 257 FSTHM-YKILCDSLGKSGRAFEALKFFRDMK-EKGILEDPSIYASLICSFASITEVKLAE 314
+ Y L D L K+GR EA + F D E+G + D Y S+I + V+
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E F E M+N + A+++GF
Sbjct: 243 ERFHE-----------------------------------MRNRGYEPDAVTYAALIDGF 267
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K + A +VY Q++ G + VTY I++ C+ ++A F+ M+++G V
Sbjct: 268 MKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATV 327
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V YS+++ + G + A+ L +M +GCEPN+ YN ++ RA L + +++
Sbjct: 328 VTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEK 387
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+ +R++ PD V +N F + G+ +L
Sbjct: 388 LLQRRLCPD--------------------VYTFNAF--------------LHGLCQRLDT 413
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNAL-RDAGLQMQAQWLQQ 598
+ + V+L + M S+GT + Y M+ + R GL++ + ++
Sbjct: 414 VSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFRE 458
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 184/429 (42%), Gaps = 44/429 (10%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIY----NVLPDAHTCSRLVASCVRARKFK 169
RP+ LI+ L +S K + +L ++ +PD T + L+ +A +
Sbjct: 144 RPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRIL 203
Query: 170 IANTLL------QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGC 223
A + + FI D + + S + G KL + +M++ G D+
Sbjct: 204 EARQVFDDEAVERGFIPDA----VTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVT 259
Query: 224 YCQIMEAYYK---IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALK 280
Y +++ + K I + +V L+ T ST Y I+ D L K+GR EA
Sbjct: 260 YAALIDGFMKAKMIPKAHRVYRQMLQ------SGTVVSTVTYNIILDGLCKAGRVAEAYA 313
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM-- 338
F M+E+G + Y++L+ F S V A ELF+ ++G +P + +++
Sbjct: 314 TFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC--EPNLVSYNIIIRG 371
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYEQLISQGCIP 397
G + K E + +L A ++G +R + V+++E ++SQG P
Sbjct: 372 LCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSP 431
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
+Y+ +++ CR A ++F EM +G VV +++++ GR+ +A+ +
Sbjct: 432 NLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVF 491
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+++ + P+ W Y SL+D R + + + L M+ + P
Sbjct: 492 RELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP--------------- 535
Query: 518 REFDMCVKF 526
R +D+ V+F
Sbjct: 536 RHYDLTVRF 544
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 4/204 (1%)
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
C P V + +IN CR +A V + G + V Y+ + K R+ DA
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L+ KM K C P Y +L+D +A L + + ++M + +P +YT VI
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM---KSEGTK 571
++A + + + + NG D + ++ K + EE L ++ K T
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182
Query: 572 L-DERLYHSAMNALRDAGLQMQAQ 594
+ D Y S ++ L AG ++A+
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEAR 206
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/470 (21%), Positives = 203/470 (43%), Gaps = 22/470 (4%)
Query: 139 LSEDFKIYNVLPDAH-----TCSRLVASCVRARKFKIANTLLQVFIT-----DGEIALLA 188
L +Y + DAH T ++LV +AR+ + A +LQ ++ D +
Sbjct: 21 LRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVV 80
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
S G +++ + E+M G+ ++ Y +++ K ++ AL
Sbjct: 81 VQSLCLG-DRVDDARELV---EEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMA 136
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
R T + Y + ++ R EA F M +G D Y +LI F
Sbjct: 137 ERGCAPTVVT---YNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSR 193
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+V EL E +G D ++ + G + +D+ E M A I+
Sbjct: 194 DVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAIT---YN 250
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++ G+ + A+++ +++ C P VTY ++++A+C++ A ++F +M
Sbjct: 251 SLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVAN 310
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
VV ++S+V GR+ DA+ L+ ++ +GC P ++ YN ++D + +A +R+
Sbjct: 311 KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKA 370
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA--GIMV 546
E+L + R P+ V+Y +++ RA D +++ ++ GG ++A I++
Sbjct: 371 EELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIIL 430
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + ++ V+ ++M G + + + AL A QA L
Sbjct: 431 DALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHEL 480
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/499 (20%), Positives = 206/499 (41%), Gaps = 25/499 (5%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR--PEKSTLKLLIRYLVQSKKWDS 135
PD + +HG+ K + + D +++ R P+ +TL ++++ L + D
Sbjct: 37 PDFLTYTKLVHGLSKARRLR----DAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDD 92
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMG 194
L E+ + +A T S LV + + A L++ G ++ +NS +
Sbjct: 93 ARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIIT 152
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
G+ + E+M + G D Y ++ + K D + L E R
Sbjct: 153 GFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGF-- 210
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
TP Y + D L K+GR +A+ F +M Y SLI + ++ A
Sbjct: 211 TP-DIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAI 266
Query: 315 ELFKEAEEKGMLRD---PEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
L + M+ D P+V LM + + G ++ ++ + M KL +
Sbjct: 267 RLLGK-----MVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTS 321
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+V+G A+++ E++ +GC P TY +++ YC+ KAE++ + + +G
Sbjct: 322 LVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRG 381
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG--CEPNVWIYNSLMDMHGRAKNLRQ 487
F V Y+ +VA + GR A+ + ++ ++G C +V +Y ++D R
Sbjct: 382 FVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDD 441
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+ ++EM +R P ++ TV+ A +A + + E G +V
Sbjct: 442 AVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVS 501
Query: 548 VFSKLSQIEELVKLLQDMK 566
+ + I++ +L +++
Sbjct: 502 AYCRAGMIQKADELASELR 520
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/527 (21%), Positives = 233/527 (44%), Gaps = 18/527 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYN--EAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
PD + S ++G +KD + + + E LP+ S +I+ L + K+ D
Sbjct: 47 PDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNS----IIKELCKMKEMDK 101
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMG 194
S+ + + PD T S ++ +++ A +L+ + G + +NS +
Sbjct: 102 AESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIH 161
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKL 252
GY+ M+ ++ V+++M S G++ + A +K G + + +F + K K
Sbjct: 162 GYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKP 221
Query: 253 DSTPFST--HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
D +ST H Y DS + F M KGI + ++ LI ++A +
Sbjct: 222 DIISYSTMLHGYATATDSC-----LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMM 276
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A +F++ + KGM+ D ++ G ++ L M + + S+ + +
Sbjct: 277 DKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCL 336
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY-ASIINAYCRIALYSKAEKVFIEMQQKG 429
+ G A ++ +++++ P V Y +SIIN C+ ++ + + M Q G
Sbjct: 337 IQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTG 396
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
VV ++S++ Y G + +A L+ M + G EPN +IY +L+D + + +
Sbjct: 397 QRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 456
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
++++M + V P V Y+ ++ +AR K ++E +G + G+++G
Sbjct: 457 TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL 516
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + +E LL+ + + K D ++ ++A+ G + +A+ L
Sbjct: 517 CRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKEL 563
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/480 (19%), Positives = 190/480 (39%), Gaps = 17/480 (3%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP T LI S W+ V + + V+P C+ + + + + A
Sbjct: 150 RPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKC 209
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKL--HMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ + G + ++++++ + GY ++ M + GI + + ++ A
Sbjct: 210 IFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 269
Query: 231 YYKIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
Y + G +K +F + +++ + D+ F+T + SL + GR +AL F M +
Sbjct: 270 YARCGMMDKAMLIFEDMQNKGMIPDTVTFAT-----VISSLCRIGRLDDALHKFNHMVDI 324
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK----LVLMYIEEGL 344
G+ ++Y LI + E+ A+EL E K + P +K ++ +EG
Sbjct: 325 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDI---PPPGVKYFSSIINNLCKEGR 381
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V + D+++ M + + +++ G+ A + + + S G P Y +
Sbjct: 382 VAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 441
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+++ YC+ A VF +M KG V YS ++ + R A + +M G
Sbjct: 442 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 501
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
++ Y ++ R + L +++ V D +++ VISA +
Sbjct: 502 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 561
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ ++ G V + +M+ K EE L ++ G D RL + + L
Sbjct: 562 ELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRML 621
>gi|9755888|emb|CAC01941.1| RSP67.2 [Raphanus sativus]
Length = 700
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 166/352 (47%), Gaps = 9/352 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y M+ + K D EK LF E R K D+ F+T L + G A+++
Sbjct: 176 YNVTMKVFRKSKDLEKSEKLFDEMLQRGVKPDNATFTT-----LISCARQCGLPNRAVEW 230
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
F M G+ D A++I ++ V++A L+ A + DP L+ +Y
Sbjct: 231 FEKMPSFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGY 290
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G + L++ E MK+ +K + I +++ K + W A +++ LIS G P T
Sbjct: 291 AGNYDGCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWST 350
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
YA++I AY R A ++ +M+ KG + V+ Y+++++M G + +A + MK
Sbjct: 351 YAALIRAYGRARYGEDALVIYRQMKGKGMELTVLLYNTLLSMCADIGYVDEAFEIFQDMK 410
Query: 462 AKG-CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ G CEP+ W ++SL+ ++ + + E +EM P T++I Y +A++
Sbjct: 411 SSGTCEPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQV 470
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
D V+ + + G D G ++ V ++ + EE+ KL+ ++ KL
Sbjct: 471 DDVVRTFEQVLELGIEPDDRFCGCLLNVMTQTPK-EEIGKLIGCVEKAKPKL 521
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 146/328 (44%), Gaps = 7/328 (2%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y + KS ++ K F +M ++G+ D + + +LI A E F++
Sbjct: 175 LYNVTMKVFRKSKDLEKSEKLFDEMLQRGVKPDNATFTTLISCARQCGLPNRAVEWFEKM 234
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
G+ D ++ Y G VE L + + + K +I ++ + Y
Sbjct: 235 PSFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAGNY 294
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
+ +YE++ S G P V Y ++++ + +A + ++ GF+ Y+++
Sbjct: 295 DGCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAAL 354
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ YG+ DA+ + +MK KG E V +YN+L+ M + + +++++M+
Sbjct: 355 IRAYGRARYGEDALVIYRQMKGKGMELTVLLYNTLLSMCADIGYVDEAFEIFQDMKSSGT 414
Query: 501 -TPDKVSYTTVISAYN---RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
PD +++++I+ Y+ R E + ++ E R G + ++ + K Q++
Sbjct: 415 CEPDSWTFSSLITVYSCCGRVSEAEAALR---EMREAGFEPTLFVLTSLIQCYGKAKQVD 471
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++V+ + + G + D+R +N +
Sbjct: 472 DVVRTFEQVLELGIEPDDRFCGCLLNVM 499
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 8/263 (3%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK--LDSTPFSTHMYKILC 266
+EKM S G+ D+ +++AY + G+ E +L+ ++ K +D FST L
Sbjct: 231 FEKMPSFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFST-----LI 285
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
G +G L + +MK G+ + IY L+ S A + K+ G
Sbjct: 286 RIYGYAGNYDGCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFE 345
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+ L+ Y E L + MK ++++ + +++ + A ++
Sbjct: 346 PNWSTYAALIRAYGRARYGEDALVIYRQMKGKGMELTVLLYNTLLSMCADIGYVDEAFEI 405
Query: 387 YEQLISQG-CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++ + S G C P T++S+I Y S+AE EM++ GF+ + +S++ YG
Sbjct: 406 FQDMKSSGTCEPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYG 465
Query: 446 KTGRIRDAMWLVAKMKAKGCEPN 468
K ++ D + ++ G EP+
Sbjct: 466 KAKQVDDVVRTFEQVLELGIEPD 488
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 35/184 (19%)
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
K+EK+F EM Q+G ++++++ + G A+ KM + G EP+ +++
Sbjct: 191 KSEKLFDEMLQRGVKPDNATFTTLISCARQCGLPNRAVEWFEKMPSFGLEPDNVTLAAMI 250
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D +GRA N+ L+ K D V+++T+I Y A +D C+ Y E
Sbjct: 251 DAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAGNYDGCLNIYEE------- 303
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
MKS G K + +Y+ ++++ A QA +
Sbjct: 304 ----------------------------MKSLGVKPNLVIYNRLLDSMGKAKRPWQATMI 335
Query: 597 QQNF 600
++
Sbjct: 336 HKDL 339
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 10/239 (4%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
E+A Y+ A+ ++R + T LIR + +D +++ E+ K V P+ +R
Sbjct: 260 EMALSLYDRART-EKWRIDPVTFSTLIRIYGYAGNYDGCLNIYEEMKSLGVKPNLVIYNR 318
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+ S +A++ A + + I++G E + + + Y + +++Y +MK G
Sbjct: 319 LLDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAALIRAYGRARYGEDALVIYRQMKGKG 378
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR---KLDSTPFSTHMYKILCDSLGKSG 273
+ L Y ++ IG ++ +F + KS + DS FS+ + C G
Sbjct: 379 MELTVLLYNTLLSMCADIGYVDEAFEIFQDMKSSGTCEPDSWTFSSLITVYSC-----CG 433
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
R EA R+M+E G + SLI + +V F++ E G+ D C
Sbjct: 434 RVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQVDDVVRTFEQVLELGIEPDDRFC 492
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/472 (20%), Positives = 199/472 (42%), Gaps = 10/472 (2%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
L+ LV+ K + S+ + + PD T + L+ + RA + + A +L+ + G
Sbjct: 168 LLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHG 227
Query: 183 EIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
F + M G+ + + + V KM AG ++ Y K+G E
Sbjct: 228 VAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDAL 287
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
+ + + + Y L ++G ALK M ++G D Y ++I
Sbjct: 288 GYIQQEIADGFEPDQVT---YNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVI 344
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ E+ A+ + + ++G L D L++ + +E+ LD+ + L
Sbjct: 345 NCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLS 404
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
++N K ++++E++ S GC P +VTY +I+ C + A +
Sbjct: 405 PDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDL 464
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
EM+ G + V Y++++ K RI +A + +M A+G + +N+L+D +
Sbjct: 465 LNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCK 524
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
AK + +L ++M + + P+ ++Y ++++ Y + NG ID
Sbjct: 525 AKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVT 584
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM------NALRDA 587
G ++ K + + +KLL+ M+ +G + + Y+ + N LRDA
Sbjct: 585 YGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDA 636
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 155/332 (46%), Gaps = 5/332 (1%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D+ F+ H+ +L + G + E++ + +M +GI D +LI + +V+
Sbjct: 161 DTVVFN-HLLNVLVE--GSKLKLLESV--YNEMTGRGIQPDVVTLNTLIKALCRAHQVRT 215
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A + +E G+ D L+ +IEEG +E L V M A + ++N
Sbjct: 216 AVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLIN 275
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G+ K A+ +Q I+ G P QVTY + ++ C+ S A KV M Q+G D
Sbjct: 276 GYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDP 335
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
V Y++++ K G + +A +V +M +GC P+ +N+L+ L + L
Sbjct: 336 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLA 395
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+E+ + ++PD ++ +I+A + + + ++ + E + +G D I++ +
Sbjct: 396 RELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSM 455
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ + LL +M+S G Y++ ++AL
Sbjct: 456 GKLGNALDLLNEMESNGCPRSTVTYNTIIDAL 487
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 140/327 (42%), Gaps = 8/327 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ +M G + D+ + ++ A E+ L E + L ++ + IL +
Sbjct: 359 IVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYT---FNILIN 415
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+L K G ++ F +MK G D Y LI S+ ++ A +L E E G R
Sbjct: 416 ALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPR 475
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
++ ++ +E+ +V + M + S +++G K + A ++
Sbjct: 476 STVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELI 535
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
EQ++ +G P +TY SI+ YC+ KA + M GF+ VV Y +++ K
Sbjct: 536 EQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKA 595
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR + A+ L+ M+ KG P YN ++ R NLR L++EM PD ++Y
Sbjct: 596 GRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTY 655
Query: 508 TTVISAYNRA-----REFDMCVKFYNE 529
V + R FD V+ N+
Sbjct: 656 KIVFRSLCRGGGPIKEAFDFLVEMVNK 682
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 135/299 (45%), Gaps = 6/299 (2%)
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G+ D ++ L+ +++KL E ++ E +G+ D L+ V
Sbjct: 157 GVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTA 216
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+ ++E M + + + ++ GF + AA++V +++ GC P VT +IN
Sbjct: 217 VLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLING 276
Query: 409 YCRIALYSKAEKVFIEMQQK---GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
YC++ + E +QQ+ GF+ V Y++ V + G + A+ ++ M +G
Sbjct: 277 YCKMG---RVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGH 333
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
+P+V+ YN++++ + L + + + +M R PD ++ T+I A + + +
Sbjct: 334 DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALD 393
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
E + G D I++ K+ ++L ++MKS G DE Y+ ++ L
Sbjct: 394 LARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHL 452
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 180/420 (42%), Gaps = 10/420 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+++T L++ ++ ++ + + P T + L+ + + + A
Sbjct: 230 PDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGY 289
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+Q I DG E + +N+ + G + + V + M G D Y ++ K
Sbjct: 290 IQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSK 349
Query: 234 IGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
G+ ++ + + R D+T F+T L +L R EAL R++ KG+
Sbjct: 350 NGELDEAKGIVNQMVDRGCLPDTTTFNT-----LIVALSSQNRLEEALDLARELTVKGLS 404
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI-EEGLVEKTLD 350
D + LI + + + L LF+E + G D EV +++ ++ G + LD
Sbjct: 405 PDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPD-EVTYNILIDHLCSMGKLGNALD 463
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
++ M++ S I++ K+ A +V++Q+ +QG VT+ ++I+ C
Sbjct: 464 LLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLC 523
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ A ++ +M ++G + Y+S++ Y K G I+ A ++ M A G E +V
Sbjct: 524 KAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVV 583
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
Y +L++ +A + KL + M + + P +Y VI + R + + E
Sbjct: 584 TYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREM 643
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 3/176 (1%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P Y I+ + E + EM+++G V S V Y + R DA+ L
Sbjct: 87 PSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDL 146
Query: 457 VAKM---KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
V G + + ++N L+++ L+ +E ++ EM R + PD V+ T+I A
Sbjct: 147 VLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKA 206
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
RA + V E +G D ++ F + IE +++ M G
Sbjct: 207 LCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAG 262
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 215/480 (44%), Gaps = 11/480 (2%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
+I+ L + K+ D S+ + + PD T S ++ +++ A +L+ + G
Sbjct: 175 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 234
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ +NS + GY+ M+ ++ V+++M S G++ + A +K G + +
Sbjct: 235 TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAK 294
Query: 242 ALF--LECKSRKLDSTPFST--HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
+F + K K D +ST H Y DS + F M KGI + ++
Sbjct: 295 CIFDSMVLKGPKPDIISYSTMLHGYATATDSC-----LADVHNIFNLMLTKGIAPNKHVF 349
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
LI ++A + A +F++ + KGM+ D ++ G ++ L M +
Sbjct: 350 NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVD 409
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY-ASIINAYCRIALYS 416
+ S+ + ++ G A ++ +++++ P V Y +SIIN C+ +
Sbjct: 410 IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVA 469
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ + + M Q G VV ++S++ Y G + +A L+ M + G EPN +IY +L+
Sbjct: 470 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 529
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D + + + ++++M + V P V Y+ ++ +AR K ++E +G
Sbjct: 530 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 589
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ G+++G + + +E LL+ + + K D ++ ++A+ G + +A+ L
Sbjct: 590 VSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKEL 649
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/480 (19%), Positives = 190/480 (39%), Gaps = 17/480 (3%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP T LI S W+ V + + V+P C+ + + + + A
Sbjct: 236 RPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKC 295
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKL--HMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ + G + ++++++ + GY ++ M + GI + + ++ A
Sbjct: 296 IFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 355
Query: 231 YYKIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
Y + G +K +F + +++ + D+ F+T + SL + GR +AL F M +
Sbjct: 356 YARCGMMDKAMLIFEDMQNKGMIPDTVTFAT-----VISSLCRIGRLDDALHKFNHMVDI 410
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK----LVLMYIEEGL 344
G+ ++Y LI + E+ A+EL E K + P +K ++ +EG
Sbjct: 411 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDI---PPPGVKYFSSIINNLCKEGR 467
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V + D+++ M + + +++ G+ A + + + S G P Y +
Sbjct: 468 VAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 527
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+++ YC+ A VF +M KG V YS ++ + R A + +M G
Sbjct: 528 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 587
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
++ Y ++ R + L +++ V D +++ VISA +
Sbjct: 588 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 647
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ ++ G V + +M+ K EE L ++ G D RL + + L
Sbjct: 648 ELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRML 707
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 108/260 (41%), Gaps = 41/260 (15%)
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
D S +++ GF K A ++ +++ QG +P + SII C++ KAE +
Sbjct: 134 DDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQ 193
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD------ 477
+M G + YS ++ K+ + A ++ +M G PN YNSL+
Sbjct: 194 KMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISG 253
Query: 478 ---------------------------MHGRAKNLRQVEK--LWKEMERRKVTPDKVSYT 508
+H K+ R E ++ M + PD +SY+
Sbjct: 254 MWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYS 313
Query: 509 TVISAYNRAREFDMCV----KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
T++ Y A D C+ +N G ++ + I++ +++ +++ + + +D
Sbjct: 314 TMLHGY--ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 371
Query: 565 MKSEGTKLDERLYHSAMNAL 584
M+++G D + + +++L
Sbjct: 372 MQNKGMIPDTVTFATVISSL 391
>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13800-like [Brachypodium distachyon]
Length = 821
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 212/503 (42%), Gaps = 5/503 (0%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
E+ Y+E K + +L+++ R L Q KK D + + V PD H S
Sbjct: 207 EIVLSAYDEMKFF-RLTLDAHSLRIITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSS 265
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
+ K +A +LQ I + ++ +AFN M G K + E G
Sbjct: 266 FIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQG 325
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
+ D Y ++ +Y K+G+ KV + S L++ + H+ L K G A
Sbjct: 326 LTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEA---NCHIMSYLLQCFTKLGMAS 382
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+ ++F+ ++ G+ D +Y + ++ + + A +L E G+ D L+
Sbjct: 383 QVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLI 442
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
Y +G ++ E M A +K + +G SKR + + +G
Sbjct: 443 KGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQ 502
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P +TY +I+ +CR S+AE +F +++KG D V YSSMV Y G +A L
Sbjct: 503 PNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVL 562
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
++ +G + + + L+ R N + + M + PD +SY+ +ISAY +
Sbjct: 563 FLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQ 622
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ ++++ G +D + +++ + K+ ++E +L M S G K D
Sbjct: 623 TGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIA 682
Query: 577 YHSAMNALRDAGLQMQAQWLQQN 599
Y ++ LQ + Q + ++
Sbjct: 683 YTVLLDGHLKEDLQRRWQGISRD 705
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 116/550 (21%), Positives = 223/550 (40%), Gaps = 61/550 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD SF+ G+ + + +LAY E + + + E +++ L + + + +
Sbjct: 258 PDVHGHSSFIIGLCECGKI-DLAYAILQEIIR-EKVQVEAIAFNVVMDGLCKEMRLEEVE 315
Query: 138 SLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
L E+ + PD + S L+ S C K+ + Q ++ G E + +
Sbjct: 316 KLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHY-QAMVSHGLEANCHIMSYLLQC 374
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ KL M ++K + +G+ +D Y M+AY K+G+ ++ L E + L +
Sbjct: 375 FTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGL--S 432
Query: 256 PFSTH----------------------------------MYKILCDSLGKSGRAFEALKF 281
P H Y IL L K G E
Sbjct: 433 PDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDL 492
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
M+++G+ + Y +I F + AE LF EEKG+ + +V Y+
Sbjct: 493 IGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLH 552
Query: 342 EGLVEKTLDVVESMKNAKL-KISDCISCA-IVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+G + V ++ AK K+ D SC+ +++ + A V ++ + +P
Sbjct: 553 KGWTDNA--YVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDL 610
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
++Y+ +I+AYC+ A F +M Q+G V+ Y+ ++ Y K G +++A L A+
Sbjct: 611 ISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQ 670
Query: 460 MKAKGCEPNVWIYNSLMDMH----------GRAKNLRQV------EKLWKEMERRKVTPD 503
M + G +P++ Y L+D H G +++ R + +L M+ ++ PD
Sbjct: 671 MTSLGIKPDIIAYTVLLDGHLKEDLQRRWQGISRDKRSLLLRAKQNRLLSSMKEMEIEPD 730
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
YT +I ++ + ++E G D ++ + ++ + L Q
Sbjct: 731 VPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAYTALINGYCSQGEVAKAEDLFQ 790
Query: 564 DMKSEGTKLD 573
+M +G K D
Sbjct: 791 EMVDKGIKPD 800
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y +++ AY + GD F + R L P +Y +L + K G EA + F
Sbjct: 613 YSKLISAYCQTGDMRNARLWFHDMVQRGL---PVDVIVYTVLMNGYCKIGLMQEACELFA 669
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
M GI D I ++ + + L E+L + +G+ RD L
Sbjct: 670 QMTSLGIKPD-------IIAYTVLLDGHLKEDL--QRRWQGISRDKRSLL---------- 710
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
L K ++ SMK +++ +++G K A ++++++ +G P Y
Sbjct: 711 LRAKQNRLLSSMKEMEIEPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAYT 770
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
++IN YC +KAE +F EM KG V+ +S +
Sbjct: 771 ALINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFSVL 807
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 23/216 (10%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L + ++G A +F DM ++G+ D +Y L+ + I ++ A ELF +
Sbjct: 613 YSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMT 672
Query: 322 EKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
G+ P++ VL+ +++E L + + ++ L+ +K+
Sbjct: 673 SLGI--KPDIIAYTVLLDGHLKEDLQRRWQGISRDKRSLLLR-------------AKQNR 717
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+++K E P Y +I+ C+ +A +F EM QKG AY++
Sbjct: 718 LLSSMKEME------IEPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAYTA 771
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
++ Y G + A L +M KG +P+V ++ L
Sbjct: 772 LINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFSVL 807
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/479 (20%), Positives = 217/479 (45%), Gaps = 5/479 (1%)
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
E KL F P+K T L+ +S++ + + ++ + P T + L+++ R
Sbjct: 312 EEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARD 371
Query: 166 RKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
+ A L + G + + + + + G+ K M + ++ +M++AG + +
Sbjct: 372 GLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTF 431
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
+++ + G ++ +F E + + P + L G++G E F++
Sbjct: 432 NALIKMHGNRGRFAEMMKVFEEIEI--CNCAP-DIVTWNTLLAVFGQNGMDSEVSGVFKE 488
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
MK G + + + +LI +++ + A ++K E G+ D ++ GL
Sbjct: 489 MKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGL 548
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
E++ V MK+ + K ++ C++++ ++ + + E++ S P V +
Sbjct: 549 WEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKT 608
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
++ + L + E F E+++KG + ++M+A+YG+ + A ++ M G
Sbjct: 609 LVLVNSKCDLLMETEHAFEELKKKG-SPDLSTLNAMIAIYGRRQMVAKANEILNFMNESG 667
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
P++ YNSLM MH R++N + E++ KE+ + + PD +SY TVI AY R
Sbjct: 668 FSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDAS 727
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ ++ + G V D V ++ S E+ + +++ M G K ++ Y+S ++
Sbjct: 728 RIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDG 786
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 198/411 (48%), Gaps = 15/411 (3%)
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
S + ++I L + K + S+ + + D + + L+ + +++ A + +
Sbjct: 183 SVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKK 242
Query: 178 FITDG-EIALLAFNSAMGGYNKLHMYYSTI--LVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
+G + L+ +N + Y K+ M +S I LV+ MKS+G+ D Y ++ +
Sbjct: 243 MEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVH-GMKSSGVAPDDYTYNTLISCCRRG 301
Query: 235 GDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
E+ A +F E K D F+T L D GKS R EA++ ++M+ G
Sbjct: 302 SLYEEAAQVFEEMKLSGFSPDKVTFNT-----LLDVYGKSRRPKEAMEVLKEMEFSGF-- 354
Query: 293 DPSI--YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
PSI Y SLI ++A ++ A EL + EKG+ D L+ + + G+ E +
Sbjct: 355 SPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMR 414
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ M+ A K + C A++ R + +KV+E++ C P VT+ +++ +
Sbjct: 415 IFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFG 474
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ + S+ VF EM++ GF ++++++ Y + G + AM + +M G P++
Sbjct: 475 QNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLS 534
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
YN+++ R Q EK++ EM+ + P++++Y +++ AY ++E +
Sbjct: 535 SYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIE 585
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 172/375 (45%), Gaps = 52/375 (13%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
++ LGK G+ A ++++ G D Y SLI ++AS + A +FK+ EE+
Sbjct: 187 VIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEE 246
Query: 324 GMLRDPEVCLKLVL-MYIEEGLV-EKTLDVVESMKNAKLKISD-----CISCAIVNGFSK 376
G + + ++L +Y + G+ K +V MK++ + D ISC
Sbjct: 247 G-CKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCC------- 298
Query: 377 RRG--YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
RRG Y A +V+E++ G P +VT+ ++++ Y + +A +V EM+ GF +
Sbjct: 299 RRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSI 358
Query: 435 VAYSSMVAMYGKTGRIRDAMWL-----------------------------------VAK 459
V Y+S+++ Y + G +R+AM L +
Sbjct: 359 VTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGE 418
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M+A GC+PN+ +N+L+ MHG ++ K+++E+E PD V++ T+++ + +
Sbjct: 419 MRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGM 478
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ E + G V +R ++ +S+ ++ + + + M G D Y++
Sbjct: 479 DSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNA 538
Query: 580 AMNALRDAGLQMQAQ 594
+ AL GL Q++
Sbjct: 539 VLAALARGGLWEQSE 553
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 176/379 (46%), Gaps = 8/379 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ ++ G LD Y ++ AY G +F + + T + Y ++ +
Sbjct: 204 ILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLIT---YNVILN 260
Query: 268 SLGKSGRAFEALK-FFRDMKEKGILEDPSIYASLI--CSFASITEVKLAEELFKEAEEKG 324
GK G + + MK G+ D Y +LI C S+ E A ++F+E + G
Sbjct: 261 VYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEE--AAQVFEEMKLSG 318
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
D L+ +Y + ++ ++V++ M+ + S ++++ +++ A+
Sbjct: 319 FSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAM 378
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
++ +Q++ +G P TY ++++ + + + A ++F EM+ G + +++++ M+
Sbjct: 379 ELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMH 438
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
G GR + M + +++ C P++ +N+L+ + G+ +V ++KEM+R P++
Sbjct: 439 GNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 498
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
++ T+ISAY+R F + Y G D + ++ ++ E+ K+ +
Sbjct: 499 DTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAE 558
Query: 565 MKSEGTKLDERLYHSAMNA 583
MK K +E Y S ++A
Sbjct: 559 MKDGRCKPNELTYCSLLHA 577
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 130/273 (47%), Gaps = 1/273 (0%)
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
S+ A +I +V A + + G D L+ Y G + V +
Sbjct: 183 SVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKK 242
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIA 413
M+ K + I+N + K W+ + + + S G P TY ++I+ R +
Sbjct: 243 MEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGS 302
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
LY +A +VF EM+ GF V +++++ +YGK+ R ++AM ++ +M+ G P++ YN
Sbjct: 303 LYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYN 362
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
SL+ + R LR+ +L +M + + PD +YTT++S + +A + ++ + E R
Sbjct: 363 SLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAA 422
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
G + ++ + + E++K+ ++++
Sbjct: 423 GCKPNICTFNALIKMHGNRGRFAEMMKVFEEIE 455
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 101/196 (51%), Gaps = 1/196 (0%)
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
A II + S A + +++ GFD V AY+S++ Y GR RDA+ + KM+
Sbjct: 186 AVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEE 245
Query: 463 KGCEPNVWIYNSLMDMHGR-AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
+GC+P + YN +++++G+ ++ L M+ V PD +Y T+IS R ++
Sbjct: 246 EGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYE 305
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ + E +++G D+ ++ V+ K + +E +++L++M+ G Y+S +
Sbjct: 306 EAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLI 365
Query: 582 NALRDAGLQMQAQWLQ 597
+A GL +A L+
Sbjct: 366 SAYARDGLLREAMELK 381
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 148/351 (42%), Gaps = 13/351 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T L+ Q+ + + ++ K +P+ T + L+++ R F+ A +
Sbjct: 461 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAV 520
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + G L ++N+ + + ++ + V+ +MK + YC ++ AY
Sbjct: 521 YKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYAN 580
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKIL---CDSLGKSGRAFEALKFFRDMKEKGI 290
+ E++ L E S + P ++ CD L ++ AFE ++K+KG
Sbjct: 581 SKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFE------ELKKKGS 634
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
D S ++I + V A E+ E G L+ M+ E++ +
Sbjct: 635 -PDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEE 693
Query: 351 VVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
V++ + LK D IS ++ + + A +++ + + G +P +TY + + +Y
Sbjct: 694 VLKEILAKGLK-PDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASY 752
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
+L+ A V M + G + Y+S+V Y K R DA+ V+ +
Sbjct: 753 AADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADAIMFVSSL 803
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/510 (20%), Positives = 225/510 (44%), Gaps = 7/510 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ + + +D ++Q + KK P T +I L + +
Sbjct: 188 PDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKAC 247
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+L + V+PD T + ++ + +AR A +L+ I++G + + +N + GY
Sbjct: 248 NLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGY 307
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + T ++ +M S G++ + M + K G S K AA F + + K
Sbjct: 308 SISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKS-KEAAEFFDSMAAKGHKPN 366
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
T Y +L G + L F M+ GI+ D ++ +I ++ + +
Sbjct: 367 LVT--YSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLI 424
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F + +E+G++ D ++ + G + +D M LK + +++ GF
Sbjct: 425 FTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCM 484
Query: 377 RRGYWAAVKVYEQLISQGCI-PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
A ++ +++S+G P V + SIIN+ C+ +A +F + G V+
Sbjct: 485 HGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVI 544
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
++S++ YG G+I A ++ M + G EP+V YN+L+D + R + L+ EM
Sbjct: 545 TFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEM 604
Query: 496 ERRKVTPDKVSYTTVISA-YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+ V P ++Y ++ +N R K +E +G +D + GI++G + +
Sbjct: 605 LSKGVKPTTITYGIILHGLFNDGRTVG-AKKMCHEMIESGTTMDISTCGIILGGLCRNNC 663
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+E + + + + + K + + ++ ++A+
Sbjct: 664 DDEAIAMFKKLGAMNVKFNIAIINTMIDAM 693
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 144/333 (43%), Gaps = 9/333 (2%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI-CSFASITEVKLAEELFKEA 320
Y IL D ++ R F + G+ D + + L+ C + + + L
Sbjct: 122 YNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLLHRM 181
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM--KNAKLKISDCISCAIVNGFSKRR 378
E G+ D +V E+ ++ LD++ +M K+ + +++G +
Sbjct: 182 PELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREG 241
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A ++ +++ QG +P VTY SII+A C+ KAE V +M GF V Y+
Sbjct: 242 EVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYN 301
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM---HGRAKNLRQVEKLWKEM 495
M+ Y +G+ ++ + +M ++G PN+ NS M HG++K + + + M
Sbjct: 302 CMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSK---EAAEFFDSM 358
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ P+ V+Y+ ++ Y F + +N NG V D+ + I++ + K +
Sbjct: 359 AAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMM 418
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+E + + M+ +G D Y + A G
Sbjct: 419 DETMLIFTQMQEQGVIPDACTYGIVIAAFSRMG 451
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 139/315 (44%), Gaps = 4/315 (1%)
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEE 342
M E G+ D Y +++ + + + A +L +K P V +++ E
Sbjct: 181 MPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFRE 240
Query: 343 GLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G V K ++ M + + D ++ +I++ K R A V Q+IS G P +VT
Sbjct: 241 GEVSKACNLFHEMMQQGV-VPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVT 299
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y +I+ Y + + +F EM +G +V +S ++ K G+ ++A M
Sbjct: 300 YNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMA 359
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
AKG +PN+ Y+ L+ + + L+ ME + D+ + VI AY + D
Sbjct: 360 AKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMD 419
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ + + + G + D GI++ FS++ ++ + + M + G K + +YHS +
Sbjct: 420 ETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLI 479
Query: 582 NALRDAGLQMQAQWL 596
G ++A+ L
Sbjct: 480 QGFCMHGNLVKAKEL 494
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/400 (20%), Positives = 170/400 (42%), Gaps = 15/400 (3%)
Query: 213 KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKS 272
KS G + Y ++ ++ G+ K LF E + + + Y + D+L K+
Sbjct: 219 KSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVT---YTSIIDALCKA 275
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
+A R M G + Y +I ++ + K +F+E +G++ + C
Sbjct: 276 RAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTC 335
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
+ + G ++ + +SM K + +++G++ + + ++ +
Sbjct: 336 NSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEG 395
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
G + Q + +I+AY + + + +F +MQ++G Y ++A + + GR+ D
Sbjct: 396 NGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLAD 455
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMD---MHGRAKNLRQVEKLWKEMERRKVT-PDKVSYT 508
AM +M A G +P +Y+SL+ MHG NL + ++L EM R + P+ V +
Sbjct: 456 AMDKFNQMIAMGLKPEGIVYHSLIQGFCMHG---NLVKAKELVSEMMSRGIPRPNIVFFN 512
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
++I++ + ++ G D ++ + + +IE+ +L M S
Sbjct: 513 SIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISA 572
Query: 569 GTKLDERLYHSAM-----NALRDAGLQMQAQWLQQNFEGT 603
G + D Y++ + N D GL + + L + + T
Sbjct: 573 GIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPT 612
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 102/523 (19%), Positives = 199/523 (38%), Gaps = 77/523 (14%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA- 171
F+P K T +I S +W + + ++P+ TC+ ++S + K K A
Sbjct: 293 FQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAA 352
Query: 172 ------------------NTLLQVFITDGEIALL-----------------AFNSAMGGY 196
+ LL + T+G + FN + Y
Sbjct: 353 EFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAY 412
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG---DS----EKVAALFLE--- 246
K M T+L++ +M+ G++ D+ Y ++ A+ ++G D+ ++ A+ L+
Sbjct: 413 GKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEG 472
Query: 247 ----------------CKSRKLDSTPFSTHM-------YKILCDSLGKSGRAFEALKFFR 283
K+++L S S + + + +SL K GR EA F
Sbjct: 473 IVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFD 532
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+ G D + SLI + + +++ A + G+ D L+ Y G
Sbjct: 533 FVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNG 592
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
++ L + M + +K + I++G A K+ ++I G T
Sbjct: 593 RIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCG 652
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDAMWLVAKMKA 462
I+ CR +A +F ++ + ++M+ AMY K + +A L + A
Sbjct: 653 IILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMY-KVRKREEAKELFDSISA 711
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
G PN Y ++ + ++ + + ++ ME+ P +I E
Sbjct: 712 TGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEI-- 769
Query: 523 CVKFYN-EFRMNGGVI--DRAIAGIMVGVFSKLSQIEELVKLL 562
VK N F+++G I + + +++ +FS+ + E VKLL
Sbjct: 770 -VKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLL 811
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/478 (22%), Positives = 206/478 (43%), Gaps = 42/478 (8%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTI 206
V P+ +T +++V + + AN + + + G + + S + GY + S
Sbjct: 214 VCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAF 273
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
V+++M G + Y ++ ++ LF++ K D P + Y +L
Sbjct: 274 KVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDD--DCYP-TVRTYTVLI 330
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+L S R EAL ++M+EKGI + Y LI S S +++ A EL + EKG++
Sbjct: 331 KALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLM 390
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR--------- 377
+ L+ Y + G++E LDVVE M++ L+ + ++ G+ KR
Sbjct: 391 PNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVL 450
Query: 378 -----RGYWAAVKVYEQLIS--------------------QGCIPGQVTYASIINAYCRI 412
R V Y LI +G +P TY S+I++ C+
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKS 510
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+A +F ++QK VV Y++++ Y K G++ +A ++ KM +K C PN +
Sbjct: 511 KRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTF 570
Query: 473 NSLMDMHGRAKN--LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
N+L +HG + L++ L ++M + + P + T +I + +FD + + +
Sbjct: 571 NAL--IHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQM 628
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+G D + + + ++++ ++ MK G D Y S + D G
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLG 686
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 118/542 (21%), Positives = 227/542 (41%), Gaps = 61/542 (11%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSED 142
+ +HG+ + + E A D + + K + P T +LI+ L S++ ++L ++
Sbjct: 291 YTHLIHGLCVERRIDE-AMDLFVKMKD-DDCYPTVRTYTVLIKALCGSERKSEALNLVKE 348
Query: 143 FKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHM 201
+ + P+ HT + L+ S K + A LL + G + ++ +N+ + GY K M
Sbjct: 349 MEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
+ V E M+S + ++ Y ++++ Y K + K + + RK+ +
Sbjct: 409 IEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVT--- 464
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L D +SG A + M ++G++ DP Y S+I S V+ A +LF E
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLE 524
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM-------------------------- 355
+K ++ + + L+ Y + G V + ++E M
Sbjct: 525 QKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLK 584
Query: 356 -------KNAKLKISDCISC--AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
K K+ + +S +++ K + A + ++Q++S G P TY + I
Sbjct: 585 EATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFI 644
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
YCR AE + +M++ G + YSS++ YG GR A ++ +M GCE
Sbjct: 645 QTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCE 704
Query: 467 PNVWIYNSLMDM-----HGRAK----------NLRQ---VEKLWKEMERRKVTPDKVSYT 508
P+ + SL+ +G+ K N+ + V +L ++M VTP+ SY
Sbjct: 705 PSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYE 764
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKS 567
++ + K ++ + G+ + ++ KL + E K++ DM
Sbjct: 765 KLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMIC 824
Query: 568 EG 569
G
Sbjct: 825 VG 826
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/411 (19%), Positives = 171/411 (41%), Gaps = 37/411 (9%)
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
GCY ++ + + G +++ +++E K+ ++ Y + + K G EA ++
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYT---YNKMVNGYCKVGNVEEANQY 240
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+ E G+ D Y SLI + ++ A ++FKE KG R+ L+
Sbjct: 241 VSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCV 300
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
E +++ +D+ MK+ + ++ A+ + +++ +G P T
Sbjct: 301 ERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHT 360
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y +I++ C KA ++ +M +KG V+ Y++++ Y K G I DA+ +V M+
Sbjct: 361 YTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELME 420
Query: 462 AKGCEPN----------------------------------VWIYNSLMDMHGRAKNLRQ 487
++ PN V YNSL+D R+ N
Sbjct: 421 SRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+L M R + PD +YT++I + +++ + ++ + + + ++
Sbjct: 481 AYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALID 540
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+ K ++ E +L+ M S+ + +++ ++ L G +A L++
Sbjct: 541 GYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEE 591
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 153/401 (38%), Gaps = 30/401 (7%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR---PEKSTLKLLIRYLVQS 130
+ +PD ++S + G Q + +D L R P+ T +I L +S
Sbjct: 456 RKVLPDVVTYNSLIDG-----QCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKS 510
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAF 189
K+ + L + + +V+P+ + L+ +A K A+ +L+ ++ + L F
Sbjct: 511 KRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTF 570
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
N+ + G L+ EKM + ++ K GD + F + S
Sbjct: 571 NALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLS 630
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
T H Y + + GR +A MKE G+ D Y+SLI + +
Sbjct: 631 ---SGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGR 687
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
A + K + G L L+ +E MK K+K + C
Sbjct: 688 TNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLE-------------MKYGKVKGGEPGVCV 734
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK- 428
+ N + V++ E+++ G P +Y ++ C I AEKVF MQQK
Sbjct: 735 MSNMME----FDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKE 790
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
G + ++++++ K + +A +V M G P +
Sbjct: 791 GISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQL 831
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 156/412 (37%), Gaps = 71/412 (17%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
+ +P++ F++ +HG+ D + +E E + +P ST +LI L++ +
Sbjct: 561 KNCLPNSLTFNALIHGLCTDGKLKEATL--LEEKMVKIDLQPTVSTDTILIHRLLKDGDF 618
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
D + PDAHT + + + R + + A ++ +G L ++S
Sbjct: 619 DHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSL 678
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY L S +V ++M G + +++ LE K K+
Sbjct: 679 IKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKH-------------LLEMKYGKV 725
Query: 253 -DSTPFSTHMYKILCDSLGKSGRAFE-ALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
P M ++ F+ ++ M E G+ + Y L+ I +
Sbjct: 726 KGGEPGVCVMSNMM---------EFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNL 776
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
++AE++F ++K E + ++L + +SC
Sbjct: 777 RVAEKVFDHMQQK-----------------------------EGISPSELVFNALLSCC- 806
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK-----VFIEM 425
K + A KV + +I G +P Q+ I+ CR LY K EK VF +
Sbjct: 807 ----CKLEKHNEAAKVVDDMICVGHLP-QLESCKIL--ICR--LYKKGEKERGTSVFQNL 857
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
Q G+ +A+ ++ GK G + L M+ GC + Y+ L++
Sbjct: 858 LQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIE 909
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 212/478 (44%), Gaps = 64/478 (13%)
Query: 116 EKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVR-ARKFKIANTL 174
+ + + LV++ D L + Y +L +C+ ++ KIA
Sbjct: 181 DPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIA--- 237
Query: 175 LQVFITDGEIALLAFNSAMGGYNKL-HMYYSTILVYE------KMKSAGIVLDSGCYCQI 227
L+VF+ E+ + +N+A YN + H V E +M+ G + D Y +
Sbjct: 238 LKVFVEFPEVGV-CWNTA--SYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTV 294
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
+ Y ++G+ ++V L E + + L P++ + +L L K+G+ EA + R+M
Sbjct: 295 INGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILL---LCKTGKVAEAERVLREMIS 351
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
+GI D IY +LI F + V A LF E +++ + D + Y
Sbjct: 352 EGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD-------FITYT------- 397
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
A++ G + A K++ +++ + P +VTY ++I+
Sbjct: 398 ---------------------AVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 436
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
YC+ +A + +M Q G +V Y+++ K G + A L+ +M KG E
Sbjct: 437 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 496
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
N++ YNSL++ +A N+ Q KL K+ME PD V+YTT++ AY ++RE V+ +
Sbjct: 497 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM---VRAH 553
Query: 528 NEFRMNGGVIDRAIA------GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
R ++DR + +++ F +E+ KLL+ M +G + Y+S
Sbjct: 554 ELLRQ---MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 608
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 187/436 (42%), Gaps = 6/436 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ + +I Q + ++ L E+ +I + P+ +T + ++ + K A +
Sbjct: 286 PDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERV 345
Query: 175 LQVFITDGEIAL--LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L+ I++G IA + + + + G+ KL S ++++M+ I D Y ++
Sbjct: 346 LREMISEG-IAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLC 404
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+ G + LF E ++L+ + Y L D K G+ EA M + G+
Sbjct: 405 QTGRVMEADKLFHEMVCKRLEPDEVT---YTALIDGYCKEGKMKEAFSLHNQMLQMGLTP 461
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ Y +L EV A EL E KG+ + LV + G +++ + ++
Sbjct: 462 NIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLM 521
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ M+ A +++ + K R A ++ Q++ + P VT+ ++N +C
Sbjct: 522 KDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMS 581
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+ EK+ M +KG Y+S++ Y +R + M AKG P+ Y
Sbjct: 582 GMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTY 641
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N L+ H +A+N+++ L ++M + SY +I + + ++F + + + R
Sbjct: 642 NILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRR 701
Query: 533 NGGVIDRAIAGIMVGV 548
G V DR I I +
Sbjct: 702 EGLVADREIYNIFADI 717
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/496 (20%), Positives = 208/496 (41%), Gaps = 10/496 (2%)
Query: 77 VPDAKKFDSFLHGMLKD--PQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
VPD + + ++G+ K P + D + A +P LI ++ D
Sbjct: 310 VPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNV----VVYSTLIDGFMRQGNAD 365
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAM 193
+ ++ V P+ T L+ + + A+ +L+ G +A + +N +
Sbjct: 366 EAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVI 425
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G+ + H L+ +M+ GI + Y I+ +IG+SE+ + L + + L
Sbjct: 426 EGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLK 485
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
F +Y L + G A + + M + + D Y SLI +++ ++ A
Sbjct: 486 PNAF---VYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEA 542
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
E + E EKG + L+ Y G +EK ++ M N+ L +D I I+ G
Sbjct: 543 IEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEG 602
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+ K + ++ +G +P Y +I+ A V +++ G
Sbjct: 603 YFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPD 662
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ Y S+++ + K + A+ L+ +M KG EP + YN+L+D ++ ++ ++
Sbjct: 663 SLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFN 722
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
+ + + P+ V+YTT+I Y +A + + YNE G D + ++ S
Sbjct: 723 SIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSG 782
Query: 554 QIEELVKLLQDMKSEG 569
+++ + + ++M + G
Sbjct: 783 DLQQALFITEEMIARG 798
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/473 (21%), Positives = 191/473 (40%), Gaps = 39/473 (8%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYST 205
+ PD +T S L+ + + R + A +++ G + ++ +N+ +GG +
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
++M+ G+V D Y I+ K G ++ L E L P + +Y L
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGL--MP-NVVVYSTL 354
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
D + G A EA K ++M G+ + Y +LI + + A + K+ + G
Sbjct: 355 IDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGY 414
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ D ++ ++ + E+ ++ M+ + + I+NG + A
Sbjct: 415 MADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASG 474
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYS----------------------------- 416
+ EQ+I+ G P YA +I+ YCR +S
Sbjct: 475 LLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLS 534
Query: 417 ------KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+A + + EM +KGF Y ++ Y G + A L+ +M G PN +
Sbjct: 535 NVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDF 594
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
IY +++ + ++ NL +V K M + + PD Y VI + + V +
Sbjct: 595 IYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVI 654
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
NG V D I G ++ F K + +E+ V LL +M +G + Y++ ++
Sbjct: 655 EKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDG 707
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 9/239 (3%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++ + K R +A KV E++ GC VTY ++I CR +A EM+ G
Sbjct: 249 LIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYG 308
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
Y +++ K GR A L+ +M G PNV +Y++L+D R N +
Sbjct: 309 LVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAF 368
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
K+ KEM V P+K++Y +I + + + G + D +++
Sbjct: 369 KIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGH 428
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL-------RDAGL--QMQAQWLQQN 599
+ EE LL +M+ G + Y +N L R +GL QM A L+ N
Sbjct: 429 LRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPN 487
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 145/361 (40%), Gaps = 17/361 (4%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
+ PD ++S + G+ + E A +YY+E + F+P T LI +
Sbjct: 517 ENLTPDLYCYNSLIIGLSNVGKMDE-AIEYYDEMLE-KGFQPNDFTYGGLIHGYSMAGNL 574
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI------ALL 187
+ L + P+ ++++ ++ + ++ L+ + G + ++
Sbjct: 575 EKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIV 634
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
N + G+ + S + V EK G+V DS Y ++ + K D EK L E
Sbjct: 635 IHNLSSSGH--MQAAVSVLSVIEK---NGLVPDSLIYGSLISGFCKAADMEKAVGLLDEM 689
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+ ++ Y L D KS A F + KG+ + Y +LI +
Sbjct: 690 AKKGIEP---GISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKA 746
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+++ A +L+ E +G+ D V L G +++ L + E M I +
Sbjct: 747 GDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFN 806
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+V+GF KR VK ++ + +P +T +I+ S+A +F+E+QQ
Sbjct: 807 -TLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQ 865
Query: 428 K 428
K
Sbjct: 866 K 866
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/467 (20%), Positives = 193/467 (41%), Gaps = 8/467 (1%)
Query: 77 VPDAKKFDSFLHGML--KDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
+PD + L +L +DP + + + P+ LI ++ D
Sbjct: 192 LPDLASYSHLLASLLNTRDPPDAAILERLLGDLRD-SRLEPDAPLFSDLISAFARAALPD 250
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSA 192
+ + L + + P ++ + L+++ A + A L F GEI A+N+
Sbjct: 251 AALELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNAL 310
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY K+ + V ++M G+ D Y +++AY + G E L E ++
Sbjct: 311 LKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEA--- 367
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D S++++ + G +A R+M G+ D Y +I +F +
Sbjct: 368 DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGH 427
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A ++F +G+ D L+ + + G + +++ + M+ + ++N
Sbjct: 428 AMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMIN 487
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
++ + + ++ QG +P +TY ++++ Y R Y +A M+ G
Sbjct: 488 LLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKP 547
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
Y ++V Y + G A+ +V M+A G E + + NSL++ G + + + +
Sbjct: 548 SPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSVL 607
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+ M+ PD ++YTT++ A R +FD Y E +G DR
Sbjct: 608 QFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDR 654
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 191/449 (42%), Gaps = 18/449 (4%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVF--ITDGEIALLA--FNSAMGGYNKLHM 201
+N LPD + S L+AS + R A L ++ + D + A F+ + + + +
Sbjct: 189 HNFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRDSRLEPDAPLFSDLISAFARAAL 248
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE------CKSRKLDST 255
+ + + ++ G+ S ++ A G + ALFLE K R
Sbjct: 249 PDAALELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPR----- 303
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
T Y L K G A +M E G+ D + Y+ L+ ++ + A
Sbjct: 304 ---TRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARI 360
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L KE E G+ V +++ + + G +K V+ M + ++ +++ F
Sbjct: 361 LLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFG 420
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A+ V+ ++ +G P VT+ ++I+A+C+ + A ++F EM++
Sbjct: 421 KYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTT 480
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+ M+ + G+ R ++++MK +G PN+ Y +L+D++GR+ ++ + M
Sbjct: 481 TYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAM 540
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + P Y +++AY + D + R +G + ++ F + ++
Sbjct: 541 KADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRV 600
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNAL 584
E +LQ MK + D Y + M AL
Sbjct: 601 VEAFSVLQFMKENDFRPDVITYTTLMKAL 629
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 151/375 (40%), Gaps = 39/375 (10%)
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
D+ + ++ A+ + + AAL L ++ + TP S + L +LG +GR EA
Sbjct: 232 DAPLFSDLISAFARAALPD--AALELLASAQAIGLTPRSNAV-TALISALGIAGRVPEAE 288
Query: 280 KFFRDMKEKG-ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
F + G I Y +L+ + I +K AE + E E G+ D LV
Sbjct: 289 ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDA 348
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
Y G E +++ M+ +K S + I+ GF + RG W
Sbjct: 349 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGF-RDRGDW----------------- 390
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
KA V EM G Y+ M+ +GK + AM +
Sbjct: 391 -----------------QKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFN 433
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M+ +G EP+V +N+L+D H + +L+KEM P +Y +I+
Sbjct: 434 RMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQE 493
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ +E + G V + +V V+ + + +E + ++ MK++G K +YH
Sbjct: 494 RWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYH 553
Query: 579 SAMNALRDAGLQMQA 593
+ +NA GL A
Sbjct: 554 ALVNAYAQRGLADHA 568
>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 595
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/560 (20%), Positives = 229/560 (40%), Gaps = 29/560 (5%)
Query: 33 STCKAFPFV-----TVNPSSIINHRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFL 87
S+ FP + + NP+ + H + + + +I +R A+ DS
Sbjct: 5 SSIHGFPLLRYFALSSNPTHFLLHPSHSSSTFSTYASINTSR----------AQFLDS-- 52
Query: 88 HGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYN 147
L++ ++ ++A D+Y++ + F P LL + + K + + +SL +
Sbjct: 53 ---LRNVKSVDVALDFYHKMVTMKPF-PCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIG 108
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTI 206
V P+ T + ++ R ++L + G E +++ F + + G I
Sbjct: 109 VKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAI 168
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDSTPFSTHMYKI 264
+ +K G D I+ K+G S + +E ++ LD T Y
Sbjct: 169 RFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTA-----YNA 223
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
+ D L K G FEA F M KGI D Y LI + K A L KG
Sbjct: 224 VVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKG 283
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
++ D + + +++ G++ + + M + ++ +I+ A+
Sbjct: 284 IMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAM 343
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+V++ +I +GC+P VTY S+I+ +C I +KA EM G D +V +++++ +
Sbjct: 344 EVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGF 403
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K G+ A L M G P++ ++D + + L++E+E+ D
Sbjct: 404 CKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDI 463
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+ Y+ +++ + + + ++ ++ G ID IM+ K +++ LL
Sbjct: 464 IIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMK 523
Query: 565 MKSEGTKLDERLYHSAMNAL 584
M+ G DE Y+ + L
Sbjct: 524 MEENGCPPDECTYNVFVQGL 543
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 140/327 (42%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ + + L G +A++F +K+ G D ++I + A K+ E
Sbjct: 151 FTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKME 210
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E+ D +V ++G+V + D+ M ++ +++G +
Sbjct: 211 EQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWK 270
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A + ++ +G +P T+ I + + + S+A+ +F M G + VV YSS++
Sbjct: 271 EAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSII 330
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
++ +++DAM + M KGC PN+ Y SL+ KN+ + EM +
Sbjct: 331 GVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLD 390
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ V++ T+I + +A + + + +G + D I++ K E + L
Sbjct: 391 PNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSL 450
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAG 588
++++ + LD +Y +N + +G
Sbjct: 451 FRELEKMNSDLDIIIYSIILNGMCSSG 477
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 151/363 (41%), Gaps = 3/363 (0%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
A+N+ + G K M + ++ +M GI D Y ++ D K AA L
Sbjct: 220 AYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNF-DRWKEAAPLLAN 278
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
RK T + ++ K+G A F M GI D Y+S+I +
Sbjct: 279 MMRKGIMPDVQT--FNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCML 336
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++K A E+F KG L + L+ + E + K + + M N L +
Sbjct: 337 NQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTW 396
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++ GF K AA +++ + G +P T A I++ + +S+A +F E+++
Sbjct: 397 NTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEK 456
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
D ++ YS ++ +G++ DA+ L + + +KG + +V YN +++ + L
Sbjct: 457 MNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDD 516
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
E L +ME PD+ +Y + R E K+ + G + +++
Sbjct: 517 AEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLIN 576
Query: 548 VFS 550
FS
Sbjct: 577 YFS 579
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 70/170 (41%)
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
CV ++ + + K A+ L+ M G +PNV +N +++ R + +
Sbjct: 77 CVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVL 136
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
M + V P V++TT+++ ++F + + G DR G ++ K+
Sbjct: 137 GLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKV 196
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+ L+ M+ + LD Y++ ++ L G+ +A L G
Sbjct: 197 GHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTG 246
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 170/341 (49%), Gaps = 4/341 (1%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L D+ G+ + +A + + E + YA L+ ++ + + AE + E +
Sbjct: 190 YNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEGVISEMQ 249
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E G+ V + ++ K ++V + MK + + + ++N + K +
Sbjct: 250 EHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVYGKSKQPM 309
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+A+K++ ++ S GC TY +++NA+ R L KAE+VF +MQQ G + V AY++++
Sbjct: 310 SAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALM 369
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y + G + A + + M+ GCEP+ YN L+D +GRA R+ E ++ ++++ +
Sbjct: 370 EAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMA 429
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P S+ ++SA+ R+ C + + +G D M+ +++ +++++ +L
Sbjct: 430 PTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDDMERL 489
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
L M G+ D ++ A+NA AG + ++ FEG
Sbjct: 490 LAAMDLAGSA-DVGSHNVAVNAYARAGYLGR---MEAAFEG 526
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 202/460 (43%), Gaps = 31/460 (6%)
Query: 130 SKKWDSIVSLSE----------DFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
+++WD I+S+ E D YN+L DA+ R + +A A Q
Sbjct: 164 NRQWDPIISVCEWIVYRSSFRPDIICYNLLIDAYGRKRQLN---KAESIYAAVLEAQCVP 220
Query: 180 TDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
T+ ALL + Y + V +M+ GI + Y ++ K + K
Sbjct: 221 TEDTYALL-----LRAYCNARSLHRAEGVISEMQEHGIPPSATVYNAYLDGLLKARCTVK 275
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
++ K + + +T Y ++ + GKS + A+K F +M+ G + Y +
Sbjct: 276 AVEVYQRMKKERCRT---NTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTA 332
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKN 357
L+ +FA + AEE+F++ ++ G +P+V LM Y G + ++ M++
Sbjct: 333 LVNAFAREGLCEKAEEVFEQMQQAG--HEPDVYAYNALMEAYSRAGFPQGASEIFSLMQH 390
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ +V+ + + + A +E L QG P ++ +++A+ R +
Sbjct: 391 MGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGR 450
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
E+V ++ + G A ++M+ Y + GR+ D L+A M G +V +N ++
Sbjct: 451 CEQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDDMERLLAAMDLAG-SADVGSHNVAVN 509
Query: 478 MHGRAKNLRQVEKLWKEMERRK-----VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+ RA L ++E ++ + RRK + D VS+T+ + Y R +E+ C++ + E
Sbjct: 510 AYARAGYLGRMEAAFEGIRRRKGKKGGIDADVVSWTSRMGGYARKKEYGKCLEIFEEMVD 569
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
G D A +++ S Q+E++ +++ M E L
Sbjct: 570 AGCYPDAGTAKVLMAACSDERQVEQVAAIVRSMHKEAKTL 609
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 180/401 (44%), Gaps = 25/401 (6%)
Query: 120 LKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
+L+ L + +K D + ED K + PD T + ++ +A K + L Q +
Sbjct: 226 FNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAML 285
Query: 180 TDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE 238
G + L+A+N+ + K M +L++ KM G CQ E Y +
Sbjct: 286 EKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENG--------CQPNEFTYSV---- 333
Query: 239 KVAALFLECKSRKLDSTP------FSTHMYKILCDSLGKSGRAFEALKFFRDM---KEKG 289
+ L E + KLD+ + +Y +L K G + EA + F +M +KG
Sbjct: 334 LLNVLVAEGQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKG 393
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
D Y S++ S S ++ A +L EK + D + + V
Sbjct: 394 ---DKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIH 450
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
D+ E MK +++ + + +AVK++E+L + C P ++Y S+IN
Sbjct: 451 DLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCL 510
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ +A F EMQ+KG + VV YS+++ +GKT ++ A L +M A+GC PN+
Sbjct: 511 GKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNL 570
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
YN L+D R+ + L+ +++++ +TPD ++Y +
Sbjct: 571 VTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 611
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 181/425 (42%), Gaps = 41/425 (9%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
++ + GY +L VY M G LD + +++A K +K +F +
Sbjct: 190 SYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDM 249
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
K R + F+ Y I+ GK+G+ E+L F+ M EKG + Y ++I + A
Sbjct: 250 KRRHCEPDTFT---YTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKG 306
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
A LF + E G + L+ + + EG + K ++VE +K ++ I
Sbjct: 307 RMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVEM---SKKYMNKQIY 363
Query: 368 CAIVNGFSK-------RRGY---W---------AAVKVYEQLISQG-------------- 394
V SK R + W A + + E L S G
Sbjct: 364 AYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHE 423
Query: 395 -CIPGQ-VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
CI + Y ++ A R+ S ++ +M+Q G + Y+ +++ YG+ GR+
Sbjct: 424 KCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDS 483
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A+ + +++ C+P+V YNSL++ G+ ++ + +KEM+ + + PD V+Y+T+I
Sbjct: 484 AVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIE 543
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ + + +M ++E G + I++ + + E V L +K +G
Sbjct: 544 CFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTP 603
Query: 573 DERLY 577
D Y
Sbjct: 604 DSITY 608
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/401 (19%), Positives = 156/401 (38%), Gaps = 72/401 (17%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
+K G+ ++ Y +++ Y ++ D +K ++L+ F+ + +L D+L K
Sbjct: 179 VKKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFA---FNMLLDALAK 235
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+ +A K F DMK + D Y +I + + LF+ EKG
Sbjct: 236 DQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGF------ 289
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
TL+++ ++ +K R AV ++ +++
Sbjct: 290 ----------------TLNLIAYN-------------TMIEALAKGRMADKAVLLFSKMV 320
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV---------------- 435
GC P + TY+ ++N +K + + +EM +K +K +
Sbjct: 321 ENGCQPNEFTYSVLLNVLVAEGQLNKLDNI-VEMSKKYMNKQIYAYFVRTLSKLGHSSEA 379
Query: 436 -----------------AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
AY SM+ +G+I +A+ L+ + K + +YN++
Sbjct: 380 HRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTA 439
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
GR K + + L+++M++ PD +Y +IS+Y RA D VK + E + D
Sbjct: 440 LGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPD 499
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
++ K ++E ++M+ +G D Y +
Sbjct: 500 VISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYST 540
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 187/382 (48%), Gaps = 8/382 (2%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+++ +N+ + GY ++ + M+ + + Y ++E Y + E+ LF
Sbjct: 226 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLF 285
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E + ++ ++Y + + K G A F +M E+ ++ + Y +LI
Sbjct: 286 DEMLKKGIEP---DVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGA 342
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
E+K AE + + + KG+ + + L+ Y ++G++++ L + M+ +I D
Sbjct: 343 CKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEI-D 401
Query: 365 CISCAIV-NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+C I+ +GF + A ++ + +G P V+++ +I+ YC+ +++A ++F
Sbjct: 402 AFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFK 461
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M++KG VV Y++ + Y K G++ +A L+ +M+ +G P+ + Y SL+D +
Sbjct: 462 VMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASG 521
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
N+ + +L+ EM + + + V+YT +IS ++ D K Y+E G V D G
Sbjct: 522 NVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPD---DG 578
Query: 544 IMVGVFSKLSQIEELVKLLQDM 565
I + + L ++ LV L+++
Sbjct: 579 IYSSLIASLHKVGPLVSGLENV 600
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 132/259 (50%)
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E+F A +KG D C + +L G +E ++ + M ++ ++I C A+V+G
Sbjct: 143 EVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGL 202
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K+ A + ++L+ +G P +TY +++N Y I ++ M++ D V
Sbjct: 203 CKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNV 262
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
Y+ ++ Y ++ +I +A L +M KG EP+V+IY S+++ + + N+++ L+ E
Sbjct: 263 TTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDE 322
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M R++ P+ +Y +I+ +A E N+ + G ++R I ++ + K
Sbjct: 323 MTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGM 382
Query: 555 IEELVKLLQDMKSEGTKLD 573
I+E ++L M+ +G ++D
Sbjct: 383 IDEALRLQNIMQQKGFEID 401
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 187/460 (40%), Gaps = 25/460 (5%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI--ALLAFNSAMGG------------ 195
PD L + RARKF +L+ + DG + + S++GG
Sbjct: 66 PDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFC 125
Query: 196 ------YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
Y M+ S++ V++ + G +D + + A + G+ E L +E
Sbjct: 126 DMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNME----LCVEFLR 181
Query: 250 RKLDS-TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ +DS + + D L K G A ++ KG Y +L+ + I
Sbjct: 182 QMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIK 241
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+V E+ E+ + + L+ Y +E+ + + M ++ I
Sbjct: 242 DVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYT 301
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+I+N K A +++++ + +P TY ++IN C+ AE + +MQ K
Sbjct: 302 SIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSK 361
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G D V +++++ Y K G I +A+ L M+ KG E + + N + R+ +
Sbjct: 362 GVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEA 421
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
++L ME R V P+ VS++ +I Y + + F + + G +
Sbjct: 422 KRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIER 481
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ K ++EE KL+ +M+ G D Y S ++ R +G
Sbjct: 482 YCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASG 521
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+M G + V +++++V K G + A L+ ++ KG +P+V YN+L++ + K
Sbjct: 182 QMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIK 241
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG--------- 534
++ V ++ ME+ V + +YT +I Y+R+ + + K ++E G
Sbjct: 242 DVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYT 301
Query: 535 ---------GVIDRAIA-----------------GIMVGVFSKLSQIEELVKLLQDMKSE 568
G + RA G ++ K +++ ++ DM+S+
Sbjct: 302 SIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSK 361
Query: 569 GTKLDERLYHSAMN-----ALRDAGLQMQAQWLQQNFE 601
G ++ ++++ M+ + D L++Q Q+ FE
Sbjct: 362 GVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFE 399
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 229/533 (42%), Gaps = 17/533 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD+ + + G+ K + + A D + + P LI L + +D
Sbjct: 8 PDSWSYGILIDGLAKAGKLND-ARDLFQKLLH-SGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 138 SLSEDFKIYNVLPDAHTCSRLV-ASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
L D P T + ++ ASC R + A L++ I DG + ++ +N+ M G
Sbjct: 66 ELFADMNRRGCPPSPVTYNVIIDASCKRG-MLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K +L++ +M+ G + + I+ + ++ +F E ++R +
Sbjct: 125 LCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDI--- 181
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P + Y IL D L K+G+ EA K FR M + GI Y +I + A E
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGF 374
LFK KG L+ + + G +++ +++ M + + D ++ +++G
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDG-HVPDVVTYSTLISGL 300
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
A + E ++ + C P VT ++I+ C+ +A +V M G V
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V Y+++V + + G+ A L++ M A+G PNV Y +L+ +A L + ++ +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+ P+ +YT +I + A + D +K + E G D + G + K +
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480
Query: 555 IEELVKLLQD----MKSEGTKLDERLYHSAMNALRDAG-LQMQAQWLQQNFEG 602
+++L++ ++SE + +Y A++ L DAG ++M +++ G
Sbjct: 481 SARALEILREGRESLRSEA--WGDEVYRFAVDGLLDAGKMEMALGFVRDMVRG 531
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 137/360 (38%), Gaps = 24/360 (6%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKL------PEFRPEKSTLKLLIRYLVQS 130
P A ++ +HGM LAY +EA +L RP + T +LI +
Sbjct: 217 TPSAVTYNVVIHGMC-------LAY-TLDEALELFKSMRSKGCRPSRFTFNILIDAHCKR 268
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-DGEIALLAF 189
K D L + +PD T S L++ + A LL+ + + ++
Sbjct: 269 GKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQ 328
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
N+ + G K V + M S+G D Y ++ + + G +E+ L + +
Sbjct: 329 NTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA 388
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
R L + Y L L K+ R EA F MK G + Y +LI F S +
Sbjct: 389 RGLAPNVVT---YTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 445
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV----ESMKNAKLKISDC 365
V +LF E G+ D V L + G + L+++ ES+++ D
Sbjct: 446 VDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAW--GDE 503
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
+ V+G A+ ++ G +P AS++ C+ +A V E+
Sbjct: 504 VYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%)
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M + P+ W Y L+D +A L L++++ VTP V+YT++I A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
FD + + + G +++ K +EE L++ M +G D Y++
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 580 AMNALRDAGLQMQAQWLQQNFE 601
M+ L +G +A L E
Sbjct: 121 VMDGLCKSGRVEEALLLFNEME 142
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/498 (20%), Positives = 208/498 (41%), Gaps = 45/498 (9%)
Query: 75 TAVPDAKKFDSFLHG--MLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
T +PD + ++ + G + ++P E A+ E ++ P T L++ L +S K
Sbjct: 89 TFLPDVETWNVLITGYCLAREP---EEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGK 145
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA-FNS 191
+ + E D HT + +V + +K + A L++ +G +A +N+
Sbjct: 146 VLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNA 205
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ G K+ I + K ++D+GC ++
Sbjct: 206 LLNGLCKMGRLEEAIDLLRK------IVDNGCTPDVV----------------------- 236
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
Y L D LGK R+FEA K F++M +G++ D Y +LI ++
Sbjct: 237 ---------TYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIP 287
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A ++K +G + D ++ + G + + + +SM+ L ++ + A++
Sbjct: 288 QASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 347
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+G K R A+++ Q+ C P +TY +I+ C+ A F EM + G
Sbjct: 348 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 407
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
V Y+ +V+ + K G A + M + C PNV Y +L+ + + L +
Sbjct: 408 PDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLY 467
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
++ M+ R PD Y++++ ++ + + ++E + GV + ++ K
Sbjct: 468 FQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERS-GVANSQTRTRLIFHLCK 526
Query: 552 LSQIEELVKLLQDMKSEG 569
++++E V L ++ EG
Sbjct: 527 ANRVDEAVSLFNAIRKEG 544
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
A++NG K A+ + +++ GC P VTY S+I+ + +A K+F EM +
Sbjct: 205 ALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR 264
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G V Y++++ + G+I A + M ++GC P+V ++++D +A +
Sbjct: 265 GLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAA 324
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+++K ME R + P++V Y+ +I +AR+ D ++ + + D I++
Sbjct: 325 VRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDG 384
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
K +E +M G K D Y+ ++ AG
Sbjct: 385 LCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAG 424
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/226 (19%), Positives = 94/226 (41%), Gaps = 1/226 (0%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
A+++ F++ + + A + + ++ +P T+ +I YC +A V EM++
Sbjct: 64 ALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEED 123
Query: 429 -GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G + ++ ++ K+G++ AM GC ++ Y +++D + K ++
Sbjct: 124 YGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQD 183
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
L +++ TP +Y +++ + + + + NG D ++
Sbjct: 184 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 243
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
K + E KL ++M G LD Y + + L AG QA
Sbjct: 244 GLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQA 289
>gi|297725255|ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|215693375|dbj|BAG88757.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa Japonica Group]
Length = 492
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 175/397 (44%), Gaps = 12/397 (3%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
RP + LIR L ++ + +L + + + PDA + L+ + ++A+
Sbjct: 82 LRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLLSTAHLRLAD 141
Query: 173 TLLQVFITDG-----EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
LL DG +L N+ Y + + V +MK GI LD+ Y +
Sbjct: 142 RLLLQMADDGVARNRRTYMLLLNA----YARAGRLEDSWWVLGEMKRRGIRLDTAGYSTL 197
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
+ Y G +K L +E + ++ +Y L D+ GK G+ +A K F M
Sbjct: 198 VRLYRDNGMWKKATDLIMEMQELGVE---LDVKIYNGLIDTFGKYGQLADARKVFDKMCA 254
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
+G+ D + + SLI + K A F +E+GM DP++ + ++ E+G ++
Sbjct: 255 EGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDE 314
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+ M+N LK S + +V+ + + + A L ++ + + N
Sbjct: 315 IKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLAN 374
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
AY + L + V M+ +G + +V + ++ +G GR +A+ ++ +K G P
Sbjct: 375 AYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSP 434
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+V Y +LM RAK +V +++KEME TPD+
Sbjct: 435 DVVTYTTLMKAFMRAKKFEKVSEVYKEMEGAGCTPDR 471
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 170/406 (41%), Gaps = 73/406 (17%)
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYK 263
S++ + M++AG+ Y +++ A + G + + AL LE R+L P + H Y
Sbjct: 69 SSLRLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEM--RRLGLRPDAAH-YN 125
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
L + L + A + M + G+ + Y L+ ++A ++ + + E + +
Sbjct: 126 ALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRR 185
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G+ D LV +Y + G+ +K D++ M+ +++ I +++ F K A
Sbjct: 186 GIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADA 245
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ---------------- 427
KV++++ ++G P T+ S+I +CR+ +A + F MQ+
Sbjct: 246 RKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISR 305
Query: 428 -------------------KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK------- 461
+G + Y+ +V +YG+ G RDA VA +K
Sbjct: 306 LGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLS 365
Query: 462 ----------------------------AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
A+G EPN+ + N L++ G A + + +
Sbjct: 366 PSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQ 425
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
++ ++PD V+YTT++ A+ RA++F+ + Y E G DR
Sbjct: 426 HIKDSGMSPDVVTYTTLMKAFMRAKKFEKVSEVYKEMEGAGCTPDR 471
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 147/332 (44%), Gaps = 35/332 (10%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S Y L +L ++GR EA +M+ G+ D + Y +L+ S ++LA+ L
Sbjct: 85 SGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLLSTAHLRLADRLL 144
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+ + G+ R+ + L+ Y G +E + V+ MK R
Sbjct: 145 LQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMK--------------------R 184
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
RG +L + G Y++++ Y ++ KA + +EMQ+ G + V Y
Sbjct: 185 RGI--------RLDTAG-------YSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIY 229
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+ ++ +GK G++ DA + KM A+G +P++ +NSL+ H R N ++ + + M+
Sbjct: 230 NGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQE 289
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ PD + T+IS ++D K ++ R G A+ ++V ++ + +
Sbjct: 290 EGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRD 349
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ +K+E +L ++ NA GL
Sbjct: 350 AHDCVAALKAENLQLSPSIFCVLANAYAQQGL 381
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 61/138 (44%)
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L+A M+A G P+ Y L+ RA + E L EM R + PD Y ++
Sbjct: 73 LLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLL 132
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+ + + +G +R +++ +++ ++E+ +L +MK G +LD
Sbjct: 133 STAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTA 192
Query: 576 LYHSAMNALRDAGLQMQA 593
Y + + RD G+ +A
Sbjct: 193 GYSTLVRLYRDNGMWKKA 210
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 121/530 (22%), Positives = 219/530 (41%), Gaps = 14/530 (2%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P+A +++ + G K+ + A D +NE + P+ ST ++ L +++ D
Sbjct: 213 LPNAVAYNTVIDGFFKEGDVNK-ACDLFNEMVQ-RGISPDLSTYNCVVNALCKARAMDKA 270
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
++ VLPD T + L+ ++K A + + + G + ++ NS M
Sbjct: 271 EAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMAS 330
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K V++ M G D Y ++ Y G + LF S D
Sbjct: 331 LCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLS---DGI 387
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+H++ +L + K G A F +M+E+G+ D Y+++I + I ++ A E
Sbjct: 388 APDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVE 447
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA--IVNG 373
F + ++G+ L+ + G + K D+V M N ++ I C I+N
Sbjct: 448 KFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPD--IGCFNFIINN 505
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
K A +++ IS G P + Y ++++ YC + A +VF M G
Sbjct: 506 LCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPN 565
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VV Y ++V Y K GRI + + L ++ KG +P+ +YN + +HG + R V K
Sbjct: 566 VVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNII--LHGLFQAGRTVPAKVK 623
Query: 494 --EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
EM + D+ +Y+ V+ + D + + E ID IM+ +
Sbjct: 624 FHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQ 683
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ ++EE L + G Y M L GL +A + + E
Sbjct: 684 IRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSME 733
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 141/346 (40%), Gaps = 13/346 (3%)
Query: 259 THMYKILCDSLGKSGRAFEALK-FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
T M L L ++ R EAL M G + D Y ++ S S + A+EL
Sbjct: 143 TIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELL 202
Query: 318 KEAEEKGMLRDPEVCLKLVLMY-------IEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
+ E G VCL + Y +EG V K D+ M + +
Sbjct: 203 RMMAEGG-----AVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCV 257
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
VN K R A + Q++ +G +P TY S+I Y + +A +V +M +G
Sbjct: 258 VNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGI 317
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
VV +S++A K G+I+DA + M KG + +++ Y +++ + L + +
Sbjct: 318 LPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTE 377
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L+ M + PD + +I AY + D +NE R G D ++
Sbjct: 378 LFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALC 437
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ ++++ V+ M +G YH + G ++A+ L
Sbjct: 438 RIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDL 483
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 120/282 (42%), Gaps = 3/282 (1%)
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CA 369
KL F + + G+ D + L+ E + LD++ + D S C
Sbjct: 125 KLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCI 184
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQG--CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++ R A ++ + G C+P V Y ++I+ + + +KA +F EM Q
Sbjct: 185 VLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQ 244
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
+G + Y+ +V K + A ++ +M KG P+ W YNSL+ + ++
Sbjct: 245 RGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKE 304
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
++ K+M + + PD V+ +++++ + + ++ M G D IM+
Sbjct: 305 AVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLN 364
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
++ + +L +L M S+G D +++ + A G+
Sbjct: 365 GYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGM 406
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/408 (19%), Positives = 159/408 (38%), Gaps = 15/408 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ +LI+ + D + + + V PD T S ++A+ R K A
Sbjct: 389 PDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEK 448
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
I G ++ ++ + G+ + +M + G+ D GC+ I+ K
Sbjct: 449 FNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCK 508
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G +F S L + +Y L D G+ AL+ F M GI +
Sbjct: 509 LGRVMDAQNIFDFTISIGLHP---NVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPN 565
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV-- 351
+Y +L+ + + + LF+E KG+ P L ++++ GL + V
Sbjct: 566 VVVYGTLVNGYCKVGRIDEGLSLFREILHKGI--KPSTTLYNIILH---GLFQAGRTVPA 620
Query: 352 ---VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
M + + + ++ G K A+ ++++L + T +I
Sbjct: 621 KVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAG 680
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE-P 467
+I +A+ +F + + G VV YS M+ K G + +A + + M+ GCE P
Sbjct: 681 MFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQP 740
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
N + N ++ + + + +++ R + D + T +I ++
Sbjct: 741 NSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFS 788
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 189/403 (46%), Gaps = 17/403 (4%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+++ M GY + + V+E++K G Y ++ Y K+G K +
Sbjct: 449 YHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEV----- 503
Query: 249 SRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
S+ ++S +M Y +L + K A F D+ + G+ D +Y ++I +F
Sbjct: 504 SKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCG 563
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
+ + A + KE +++ + ++ + G +++ LDV + M+ S CI
Sbjct: 564 MGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRR-----SGCI 618
Query: 367 SC-----AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
A++ G ++R A+++ +++ G P + TY +I++ Y + KA +
Sbjct: 619 PTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEY 678
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F +++ +G V Y +++ K+GR++ A+ + +M A+ N ++YN L+D R
Sbjct: 679 FTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWAR 738
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
++ + L ++M++ V PD +YT+ I+A +A + K E +G +
Sbjct: 739 RGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKT 798
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ +++ S E+ ++ Q+MK G K D+ +YH M AL
Sbjct: 799 YTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTAL 841
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/465 (21%), Positives = 194/465 (41%), Gaps = 75/465 (16%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR-KLDSTPFSTHMYKILC 266
+E M++ GI S Y ++ AY D E+ L C + K + S Y I+
Sbjct: 328 TFESMRARGIEPTSHVYTSLIHAYAVGRDMEEA----LSCARKMKEEGVEMSLVTYSIIV 383
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG-- 324
K G A A ++F++ K++ + IY ++I ++ + AE L +E E +G
Sbjct: 384 GGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGID 443
Query: 325 --------------MLRDPEVCLK-------------------LVLMYIEEGLVEKTLDV 351
M+ + E CL L+ +Y + G + K L+V
Sbjct: 444 APIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEV 503
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+ M++A +K + ++NGF K + + A ++E ++ G P V Y +II A+C
Sbjct: 504 SKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCG 563
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ +A + EMQ++ + ++ + + G ++ A+ + M+ GC P V
Sbjct: 564 MGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHT 623
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+N+L+ + + + ++ EM V+P++ +YTT++ Y + +++ + R
Sbjct: 624 FNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLR 683
Query: 532 MNG------------------GVIDRAIA-----------------GIMVGVFSKLSQIE 556
G G + A+A I++ +++ +
Sbjct: 684 DEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVW 743
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
E L+Q MK G K D Y S +NA AG ++A + + E
Sbjct: 744 EAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEME 788
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/292 (18%), Positives = 130/292 (44%)
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y ++ +A ++ A + F+ +G+ V L+ Y +E+ L MK
Sbjct: 309 YGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMK 368
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+++S IV GF+K AA + +++ + + Y ++I AYC+
Sbjct: 369 EEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMD 428
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+AE + EM+ +G D + Y +M+ Y G + + ++K G P+V Y L+
Sbjct: 429 QAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLI 488
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+++ + + + ++ K ME + + +Y+ +I+ + + +++ + + +G
Sbjct: 489 NLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLK 548
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
D + ++ F + ++ + ++++M+ E + R + ++ AG
Sbjct: 549 PDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAG 600
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/223 (18%), Positives = 87/223 (39%), Gaps = 35/223 (15%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + Y +++ Y R +A + F M+ +G + Y+S++ Y + +A+
Sbjct: 304 PSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSC 363
Query: 457 VAKMKAKGCE-----------------------------------PNVWIYNSLMDMHGR 481
KMK +G E N IY +++ + +
Sbjct: 364 ARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQ 423
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
N+ Q E L +EME + Y T++ Y + C+ + + G
Sbjct: 424 TCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVS 483
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G ++ +++K+ +I + +++ + M+S G K + + Y +N
Sbjct: 484 YGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGF 526
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 199/449 (44%), Gaps = 46/449 (10%)
Query: 168 FKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
F+ + T L + T LL N G N S +V++ M+S GI+ DS +
Sbjct: 96 FEFSRTHLSINHTFNTYDLLMRNLCKVGLND-----SAKIVFDCMRSDGILPDSSILELL 150
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPF------------------------------ 257
+ +Y ++G + E + +PF
Sbjct: 151 VSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYF 210
Query: 258 --STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ + IL L + G +A +FF++M G D Y +LI F + E+ +
Sbjct: 211 VPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHD 270
Query: 316 LFKEAEE-KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
L KE KG+ D ++ Y + G ++ ++ + M ++ +K +D +++GF
Sbjct: 271 LLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGF 330
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K +A+ +YE+++ GC+P VT+ S+I+ YCR ++ K++ EM+ + V
Sbjct: 331 GKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNV 390
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
Y+ ++ K RIR+A + +K+ P +IYN ++D +A + + + E
Sbjct: 391 YTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAE 450
Query: 495 MERRKVTPDKVSYTT-VISAYNRAREFDMCVKFYNEFRMNGG----VIDRAIAGIM-VGV 548
M+ +K PDK+++T +I + R + FY +N I+ I+ ++ G+
Sbjct: 451 MQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGM 510
Query: 549 FSKLSQIEE--LVKLLQDMKSEGTKLDER 575
++ SQI++ L KL + S G+ L +
Sbjct: 511 PNEASQIKQAALQKLNLGLSSLGSPLTRK 539
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 136/337 (40%), Gaps = 36/337 (10%)
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
SR S + + Y +L +L K G A F M+ GIL D SI L+ S+A +
Sbjct: 99 SRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMG 158
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
++ A+ E G+ P V L+ M +++ LV++ + + + D S
Sbjct: 159 KLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYF-VPDVYSF 217
Query: 369 AI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
I + G + A + ++ + + GC P V+Y ++IN +CR+ SK + E
Sbjct: 218 NILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKE--- 274
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
M KG P+V Y S++ + + +++
Sbjct: 275 -------------------------------DMLIKGVSPDVITYTSIISGYCKLGDMKA 303
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+L+ EM + P+ ++ +I + + + Y + + G + D ++
Sbjct: 304 ASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLID 363
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + ++ + +KL ++MK + Y +NAL
Sbjct: 364 GYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINAL 400
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 153/383 (39%), Gaps = 80/383 (20%)
Query: 111 PEFRPEKSTLKLLIRYLVQSKKWD----------------SIVS---------------- 138
P F P+ + +LIR L + + D IVS
Sbjct: 208 PYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISK 267
Query: 139 ----LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAM 193
L ED I V PD T + +++ + K A+ L ++ G + FN +
Sbjct: 268 GHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLI 327
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G+ K+ S +++YEKM G + D + +++ Y + G+ + L+ E K R L
Sbjct: 328 DGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLS 387
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+ + Y +L ++L K R EA F R +K ++ P IY +I F +V A
Sbjct: 388 P---NVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEA 444
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+ E +EK R ++ +++ I +C+ +V
Sbjct: 445 NFIVAEMQEKK-CRPDKITFTILI------------------------IGNCMKGRMVE- 478
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
A+ + ++I C+P ++T S+I+ + + ++A ++ +Q K
Sbjct: 479 ---------AISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI----KQAALQKL 525
Query: 434 VVAYSSMVA-MYGKTGRIRDAMW 455
+ SS+ + + K+ R+ A+W
Sbjct: 526 NLGLSSLGSPLTRKSSRVPVAVW 548
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 201/482 (41%), Gaps = 39/482 (8%)
Query: 122 LLIRYLVQSKK-WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
LLI+ VQ+++ D +V + +LP T S ++ +R R+F++A
Sbjct: 150 LLIQTYVQNRRELDGLVVVRLMMDC-GILPQIRTLSGVLNGLIRIRQFRMA--------- 199
Query: 181 DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
LH++ +++ S+G+ D Y ++ + ++ D +
Sbjct: 200 ------------------LHLF-------DEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
+ +S D S Y + L K+ R +EA++ + KG+ D Y +L
Sbjct: 235 REVIGRMESSGCD---LSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTL 291
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ + E + EE+ E E G + LV ++G + D+V +K +
Sbjct: 292 VLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV 351
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
S + A++N K A ++ + +G P VTY+ +I+++C+ A
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+M + G V YSS+++ + K G++R A L +M A G +PNV IY SL+ +
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+ L +L+ EM + ++P+ ++T +IS A K + E + +
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+++ K +LL +M +G D Y ++ L G +A+ +
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL 591
Query: 601 EG 602
+G
Sbjct: 592 QG 593
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 189/444 (42%), Gaps = 15/444 (3%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VP + + G+ K A+D N+ KK P LI + + K D
Sbjct: 317 VPSEAAVSNLVDGLRKKGNIGS-AFDLVNKVKKFG-VAPSLFVYNALINSMCKDGKLDEA 374
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
SL + + P+ T S L+ S + K +A L G + + ++S + G
Sbjct: 375 ESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISG 434
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ KL + ++++M + G+ + Y ++ Y K G+ L+ E + +
Sbjct: 435 HCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISP- 493
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+T+ + L L + R EA K F +M E ++ + Y LI A E
Sbjct: 494 --NTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE 551
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC------- 368
L E EKG++ D L+ G V + + + ++ + K+++ C
Sbjct: 552 LLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTY 611
Query: 369 -AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
A++NG K A + ++++ +P Q TYA ++ KA ++ ++
Sbjct: 612 TALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH-DVLL 670
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
+GF V Y+ ++ + K GRI++A ++ M G P+ Y++++ + R +L++
Sbjct: 671 EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKE 730
Query: 488 VEKLWKEMERRKVTPDKVSYTTVI 511
KLW+ M R V PD V+Y +I
Sbjct: 731 AIKLWESMLNRGVNPDTVAYNFLI 754
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 147/328 (44%), Gaps = 1/328 (0%)
Query: 257 FSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
FST + + +L + ++ R + L R M + GIL + ++ I + ++A
Sbjct: 142 FSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALH 201
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
LF E G+ D V +V E + +V+ M+++ +S + G
Sbjct: 202 LFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLC 261
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K + W AV++ L +G TY +++ C++ + E++ EM + GF
Sbjct: 262 KNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEA 321
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
A S++V K G I A LV K+K G P++++YN+L++ + L + E L+ M
Sbjct: 322 AVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNM 381
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + P+ V+Y+ +I ++ + + D+ + F + G ++ KL ++
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNA 583
L +M + G K + +Y S ++
Sbjct: 442 RAAKSLFDEMIANGLKPNVVIYTSLISG 469
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 173/446 (38%), Gaps = 50/446 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P +++ ++ M KD + E + N K P T +LI + K D +
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHK--GLFPNDVTYSILIDSFCKRGKLDVAL 410
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ + S L++ + K + A +L I +G + ++ + S + GY
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K ++ +Y +M GI ++ + ++ + LF E +
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y +L + K G A + +M EKG++ D Y LI S V A E
Sbjct: 531 VT---YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREF 587
Query: 317 FKEAE-EKGMLRDPEVCLKLVLMYI-------EEGLVEKT-------------------- 348
+ + E+ L + E CL V+ Y + GL++K
Sbjct: 588 MNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYA 647
Query: 349 --LDVVESMKNAK--LKISDCISCA----------IVNGFSKRRGYWAAVKVYEQLISQG 394
LD + S N + +++ D + ++ GF K A +V +I G
Sbjct: 648 CFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSG 707
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
P ++Y++II YCR +A K++ M +G + VAY+ ++ TG + A
Sbjct: 708 ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAF 767
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHG 480
L M +G +PN YNSL +HG
Sbjct: 768 ELRDDMMRRGVKPNRATYNSL--IHG 791
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 98/245 (40%), Gaps = 20/245 (8%)
Query: 77 VPDAKKFDSFLHGML---KDPQTQELAYDYYNEAKKLPEFR---PEKSTLKLLIRYLVQS 130
VPD + + G+ + + +E D E +KL E P T LI L +
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKI 621
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHT----CSRLVASCVRARKFKIANTLLQVFITDGEIAL 186
D L + N LP+ +T L + + ++ + LL+ F+ +
Sbjct: 622 GLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLAN----T 677
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ +N + G+ KL V M +GI D Y I+ Y + GD ++ L+
Sbjct: 678 VTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWES 737
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---CS 303
+R ++ + + C G+ +AFE DM +G+ + + Y SLI C
Sbjct: 738 MLNRGVNPDTVAYNFLIYGCCVTGELTKAFE---LRDDMMRRGVKPNRATYNSLIHGTCL 794
Query: 304 FASIT 308
+S++
Sbjct: 795 MSSVS 799
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 187/382 (48%), Gaps = 8/382 (2%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+++ +N+ + GY ++ + M+ + + Y ++E Y + E+ LF
Sbjct: 222 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLF 281
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E + ++ ++Y + + K G A F +M E+ ++ + Y +LI
Sbjct: 282 DEMLKKGIEP---DVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGA 338
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
E+K AE + + + KG+ + + L+ Y ++G++++ L + M+ +I D
Sbjct: 339 CKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEI-D 397
Query: 365 CISCAIV-NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+C I+ +GF + A ++ + +G P V+++ +I+ YC+ +++A ++F
Sbjct: 398 AFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFK 457
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M++KG VV Y++ + Y K G++ +A L+ +M+ +G P+ + Y SL+D +
Sbjct: 458 VMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASG 517
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
N+ + +L+ EM + + + V+YT +IS ++ D K Y+E G V D G
Sbjct: 518 NVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPD---DG 574
Query: 544 IMVGVFSKLSQIEELVKLLQDM 565
I + + L ++ LV L+++
Sbjct: 575 IYSSLIASLHKVGPLVSGLENV 596
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 132/259 (50%)
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E+F A +KG D C + +L G +E ++ + M ++ ++I C A+V+G
Sbjct: 139 EVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGL 198
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K+ A + ++L+ +G P +TY +++N Y I ++ M++ D V
Sbjct: 199 CKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNV 258
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
Y+ ++ Y ++ +I +A L +M KG EP+V+IY S+++ + + N+++ L+ E
Sbjct: 259 TTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDE 318
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M R++ P+ +Y +I+ +A E N+ + G ++R I ++ + K
Sbjct: 319 MTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGM 378
Query: 555 IEELVKLLQDMKSEGTKLD 573
I+E ++L M+ +G ++D
Sbjct: 379 IDEALRLQNIMQQKGFEID 397
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 187/460 (40%), Gaps = 25/460 (5%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI--ALLAFNSAMGG------------ 195
PD L + RARKF +L+ + DG + + S++GG
Sbjct: 62 PDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFC 121
Query: 196 ------YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
Y M+ S++ V++ + G +D + + A + G+ E L +E
Sbjct: 122 DMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNME----LCVEFLR 177
Query: 250 RKLDS-TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ +DS + + D L K G A ++ KG Y +L+ + I
Sbjct: 178 QMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIK 237
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+V E+ E+ + + L+ Y +E+ + + M ++ I
Sbjct: 238 DVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYT 297
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+I+N K A +++++ + +P TY ++IN C+ AE + +MQ K
Sbjct: 298 SIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSK 357
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G D V +++++ Y K G I +A+ L M+ KG E + + N + R+ +
Sbjct: 358 GVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEA 417
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
++L ME R V P+ VS++ +I Y + + F + + G +
Sbjct: 418 KRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIER 477
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ K ++EE KL+ +M+ G D Y S ++ R +G
Sbjct: 478 YCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASG 517
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+M G + V +++++V K G + A L+ ++ KG +P+V YN+L++ + K
Sbjct: 178 QMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIK 237
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG--------- 534
++ V ++ ME+ V + +YT +I Y+R+ + + K ++E G
Sbjct: 238 DVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYT 297
Query: 535 ---------GVIDRAIA-----------------GIMVGVFSKLSQIEELVKLLQDMKSE 568
G + RA G ++ K +++ ++ DM+S+
Sbjct: 298 SIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSK 357
Query: 569 GTKLDERLYHSAMN-----ALRDAGLQMQAQWLQQNFE 601
G ++ ++++ M+ + D L++Q Q+ FE
Sbjct: 358 GVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFE 395
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 199/449 (44%), Gaps = 46/449 (10%)
Query: 168 FKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
F+ + T L + T LL N G N S +V++ M+S GI+ DS +
Sbjct: 96 FEFSRTHLSINHTFNTYDLLMRNLCKVGLND-----SAKIVFDCMRSDGILPDSSILELL 150
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPF------------------------------ 257
+ +Y ++G + E + +PF
Sbjct: 151 VSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYF 210
Query: 258 --STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ + IL L + G +A +FF++M G D Y +LI F + E+ +
Sbjct: 211 VPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHD 270
Query: 316 LFKEAEE-KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
L KE KG+ D ++ Y + G ++ ++ + M ++ +K +D +++GF
Sbjct: 271 LLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGF 330
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K +A+ +YE+++ GC+P VT+ S+I+ YCR ++ K++ EM+ + V
Sbjct: 331 GKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNV 390
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
Y+ ++ K RIR+A + +K+ P +IYN ++D +A + + + E
Sbjct: 391 YTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAE 450
Query: 495 MERRKVTPDKVSYTT-VISAYNRAREFDMCVKFYNEFRMNGG----VIDRAIAGIM-VGV 548
M+ +K PDK+++T +I + R + FY +N I+ I+ ++ G+
Sbjct: 451 MQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGM 510
Query: 549 FSKLSQIEE--LVKLLQDMKSEGTKLDER 575
++ SQI++ L KL + S G+ L +
Sbjct: 511 PNEASQIKQAALQKLNLGLSSLGSPLTRK 539
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 136/337 (40%), Gaps = 36/337 (10%)
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
SR S + + Y +L +L K G A F M+ GIL D SI L+ S+A +
Sbjct: 99 SRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMG 158
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
++ A+ E G+ P V L+ M +++ LV++ + + + D S
Sbjct: 159 KLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYF-VPDVYSF 217
Query: 369 AI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
I + G + A + ++ + + GC P V+Y ++IN +CR+ SK + E
Sbjct: 218 NILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKE--- 274
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
M KG P+V Y S++ + + +++
Sbjct: 275 -------------------------------DMLIKGVSPDVITYTSIISGYCKLGDMKA 303
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+L+ EM + P+ ++ +I + + + Y + + G + D ++
Sbjct: 304 ASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLID 363
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + ++ + +KL ++MK + Y +NAL
Sbjct: 364 GYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINAL 400
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 153/383 (39%), Gaps = 80/383 (20%)
Query: 111 PEFRPEKSTLKLLIRYLVQSKKWD----------------SIVS---------------- 138
P F P+ + +LIR L + + D IVS
Sbjct: 208 PYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISK 267
Query: 139 ----LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAM 193
L ED I V PD T + +++ + K A+ L ++ G + FN +
Sbjct: 268 GHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLI 327
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G+ K+ S +++YEKM G + D + +++ Y + G+ + L+ E K R L
Sbjct: 328 DGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLS 387
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+ + Y +L ++L K R EA F R +K ++ P IY +I F +V A
Sbjct: 388 P---NVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEA 444
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+ E +EK R ++ +++ I +C+ +V
Sbjct: 445 NFIVAEMQEKK-CRPDKITFTILI------------------------IGNCMKGRMVE- 478
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
A+ + ++I C+P ++T S+I+ + + ++A ++ +Q K
Sbjct: 479 ---------AISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI----KQAALQKL 525
Query: 434 VVAYSSMVA-MYGKTGRIRDAMW 455
+ SS+ + + K+ R+ A+W
Sbjct: 526 NLGLSSLGSPLTRKSSRVPAAVW 548
>gi|326520353|dbj|BAK07435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 652
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 176/381 (46%), Gaps = 14/381 (3%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y ++ A + G + L LE ++R + + FS Y L +L ++G AL F
Sbjct: 122 YNLLLRAASRAGQLRLASGLLLEMRARGVAADGFS---YSTLLAALTRAGHLDHALTFLP 178
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
M+ + D ++++LI + A LF G+ D + + Y +
Sbjct: 179 LMEADAVAPDLVLFSNLIHLALRAGDAPKALALFSRLRAAGIRPDLKAYNAAIAAYCKSD 238
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG-YWAAVKVYEQLISQGCI-PGQVT 401
L+ ++ A D S A V RRG + AAV ++ + + + P
Sbjct: 239 LLRDAKRLLLHDVPADGVAPDAESYAPVLAALARRGRHLAAVSLFSHMRAVARVKPDLSV 298
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ ++NAY ++ L A+++F M++ G VV Y++M+ +YG G +A+ L M
Sbjct: 299 FNIVLNAYGQLDLARDADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMY 358
Query: 462 AKGCE------PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
+ + PNV YN+++ +HG+A + L ++M+ + P+ V+Y+TV+S +
Sbjct: 359 STASDGGTVVRPNVVTYNTMIAIHGKALEDDKAGSLVQQMQASGIQPNAVTYSTVLSIWV 418
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+A + D K +++ R +G +D + MV + + + + +LL++++ + +
Sbjct: 419 KAGKLDRAAKLFDKLRESGTEMDPVLYQTMVVAYERAGLVSQSKRLLRELRHPDQAIPK- 477
Query: 576 LYHSAMNALRDAGLQMQAQWL 596
+AM L AG +A WL
Sbjct: 478 --ETAMKILASAGRVEEAAWL 496
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/461 (19%), Positives = 196/461 (42%), Gaps = 14/461 (3%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
L+ L ++ D ++ + V PD S L+ +RA A L G
Sbjct: 160 LLAALTRAGHLDHALTFLPLMEADAVAPDLVLFSNLIHLALRAGDAPKALALFSRLRAAG 219
Query: 183 -EIALLAFNSAMGGYNKLHMYY-STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
L A+N+A+ Y K + + L+ + + G+ D+ Y ++ A + G +
Sbjct: 220 IRPDLKAYNAAIAAYCKSDLLRDAKRLLLHDVPADGVAPDAESYAPVLAALARRG--RHL 277
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
AA+ L R + ++ I+ ++ G+ A +A + F M+ G+ Y ++
Sbjct: 278 AAVSLFSHMRAVARVKPDLSVFNIVLNAYGQLDLARDADRLFWSMRRAGVPPSVVTYNTM 337
Query: 301 ICSFASIT----EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE--KTLDVVES 354
+ + V L ++ A + G + P V ++ I +E K +V+
Sbjct: 338 LRVYGDAGLFGEAVHLFGLMYSTASDGGTVVRPNVVTYNTMIAIHGKALEDDKAGSLVQQ 397
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
M+ + ++ + +++ + K A K++++L G V Y +++ AY R L
Sbjct: 398 MQASGIQPNAVTYSTVLSIWVKAGKLDRAAKLFDKLRESGTEMDPVLYQTMVVAYERAGL 457
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
S+++++ E++ D+ + ++M + GR+ +A WL + G + ++ +
Sbjct: 458 VSQSKRLLRELRHP--DQAIPKETAM-KILASAGRVEEAAWLFRRAVHTGEVKDPSVHRA 514
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+M + + + R V +++ EM + PD + ++AY + +EFD Y R G
Sbjct: 515 MMALFAKNRRHRSVVEVFDEMRKLGHLPDSETIAVTMNAYGKLKEFDKAAGLYRALREEG 574
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
V + M+ + + L +L+ ++ S +D+R
Sbjct: 575 CVFSDRVHFQMLSLLGAQQDFDALERLVGEL-SHDPSIDKR 614
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 56/115 (48%)
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
V Y ++ A R A + +EM+ +G +YS+++A + G + A+ +
Sbjct: 120 VPYNLLLRAASRAGQLRLASGLLLEMRARGVAADGFSYSTLLAALTRAGHLDHALTFLPL 179
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
M+A P++ ++++L+ + RA + + L+ + + PD +Y I+AY
Sbjct: 180 MEADAVAPDLVLFSNLIHLALRAGDAPKALALFSRLRAAGIRPDLKAYNAAIAAY 234
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 94/219 (42%), Gaps = 6/219 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+++K++ +G +D Y ++ AY + G + L E + + P T M KIL
Sbjct: 429 LFDKLRESGTEMDPVLYQTMVVAYERAGLVSQSKRLLRELRHPD-QAIPKETAM-KILA- 485
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+GR EA FR G ++DPS++ +++ FA + E+F E + G L
Sbjct: 486 ---SAGRVEEAAWLFRRAVHTGEVKDPSVHRAMMALFAKNRRHRSVVEVFDEMRKLGHLP 542
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D E + Y + +K + +++ SD + +++ ++ + A ++
Sbjct: 543 DSETIAVTMNAYGKLKEFDKAAGLYRALREEGCVFSDRVHFQMLSLLGAQQDFDALERLV 602
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
+L I + Y Y R + +A ++ +++
Sbjct: 603 GELSHDPSIDKRELYLVSAGVYERAYRFDEAAQIISQIR 641
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 120/551 (21%), Positives = 224/551 (40%), Gaps = 42/551 (7%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ F + G + T + + E ++L F P K LI + K D
Sbjct: 89 PNEYSFGILVRGYCRAGFTSK-GLELLGEMRRLG-FSPNKVVYNTLISSFCKEGKTDDAE 146
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL-----LAFNSA 192
L ++ + + PD T + +++ + K A+ + + D + L + +N
Sbjct: 147 KLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLM 206
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+GG+ K M ++EKMK + +++ Y + +IG + + E +
Sbjct: 207 LGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGM 266
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
+ +S Y I+ D L K+G F+A R M G+L D Y +L+ + +V
Sbjct: 267 EPNVYS---YNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSE 323
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV- 371
A + +E G + C L+ +EG + + ++++ M N K + D ++C IV
Sbjct: 324 ANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKM-NEKGYVIDTVTCNIVI 382
Query: 372 NGFSKRRGYWAAVKVYEQLISQG-----------------------CIPGQVTYASIINA 408
+G A+++ + + G C+P ++Y++II+
Sbjct: 383 DGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISG 442
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
C+ +A+K FIEM K Y + + K G+I A ++ M+ KGC
Sbjct: 443 LCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKT 502
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ YNSL+ G + ++ L EM R V+PD Y V+S+ +
Sbjct: 503 LQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLD 562
Query: 529 EFRMNGGVIDRAIAGIMVGVFSK---LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
E G + + I++ F K S ++E+ ++ ++ E LY N L
Sbjct: 563 EMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGH----KEALYSLTFNELL 618
Query: 586 DAGLQMQAQWL 596
G ++A+ L
Sbjct: 619 VGGEVVKAKEL 629
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 116/510 (22%), Positives = 208/510 (40%), Gaps = 43/510 (8%)
Query: 109 KLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKF 168
+ PE P +L+R + + D + L +D V P+ +T + L+ +
Sbjct: 13 RFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCL 72
Query: 169 KIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
A L G E +F + GY + + + +M+ G + Y +
Sbjct: 73 DDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTL 132
Query: 228 MEAYYKIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+ ++ K G ++ L E + L D F+ + +L SG+ EA + FRDM
Sbjct: 133 ISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARI-----SALCSSGKVLEASRIFRDM 187
Query: 286 KEKGILEDPS----IYASLICSFASITEVKLAEELFK--EAEEKGMLRDPEVCLKLVLMY 339
+ +L P Y ++ F ++ A LF+ + E M R+ L L+
Sbjct: 188 QIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVR 247
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
I + L+E L V++ M + ++ + +++G K + A + + S G +P
Sbjct: 248 IGK-LLEAQL-VLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDT 305
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG--KTGRIRDAMWLV 457
VTY ++++ YC S+A V EM + G Y+ + +Y K GRI +A L+
Sbjct: 306 VTYTTLLHGYCHTGKVSEANNVLREMMRDGCSP--NNYTCNILLYSLWKEGRISEAEELL 363
Query: 458 AKMKAKGCEPNVWIYNSLMD---MHGRA-KNLRQVEKLWKEM------------------ 495
KM KG + N ++D +G+ K + V +W
Sbjct: 364 QKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDS 423
Query: 496 -ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
R+K PD +SY+T+IS +A K + E D AI + + F K +
Sbjct: 424 DSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGK 483
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
I ++L+DM+ +G + Y+S + L
Sbjct: 484 ISSAFRVLKDMEKKGCNKTLQTYNSLIMGL 513
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 145/377 (38%), Gaps = 39/377 (10%)
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ P S ++Y +L S K GR +DM G+ + + LI +
Sbjct: 13 RFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCL 72
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A ELF + EKG + LV Y G K L+++ M+ + + +
Sbjct: 73 DDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTL 132
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK-- 428
++ F K A K+ +++ G P VT+ + I+A C +A ++F +MQ
Sbjct: 133 ISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEV 192
Query: 429 -GFDKC-VVAYSSMVAMYGKTGRIRDAMWLVAKMKAK----------------------- 463
G + ++ Y+ M+ + K G + +A L KMK
Sbjct: 193 LGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLL 252
Query: 464 ------------GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
G EPNV+ YN +MD + L L + M V PD V+YTT++
Sbjct: 253 EAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLL 312
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
Y + E +G + I++ K +I E +LLQ M +G
Sbjct: 313 HGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYV 372
Query: 572 LDERLYHSAMNALRDAG 588
+D + ++ L + G
Sbjct: 373 IDTVTCNIVIDGLCNNG 389
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 112/220 (50%), Gaps = 4/220 (1%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A ++++++ +GC P + ++ ++ YCR SK ++ EM++ GF V Y+++++
Sbjct: 75 ARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLIS 134
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV-- 500
+ K G+ DA LV +M+ G P+V +N+ + + + + +++++M+ +V
Sbjct: 135 SFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLG 194
Query: 501 --TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
P+ ++Y ++ + + + + + +++ +++R I + ++ ++ E
Sbjct: 195 LPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEA 254
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+L++M G + + Y+ M+ L G+ A+ L +
Sbjct: 255 QLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMR 294
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 4/211 (1%)
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ +++ G P T+ +I C A ++F +M +KG + ++ +V Y +
Sbjct: 45 KDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRA 104
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G + L+ +M+ G PN +YN+L+ + EKL EM + ++PD V++
Sbjct: 105 GFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTF 164
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNG--GVIDRAIA--GIMVGVFSKLSQIEELVKLLQ 563
ISA + + + + + +++ G+ I +M+G F K +EE L +
Sbjct: 165 NARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFE 224
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
MK ++ Y+ + L G ++AQ
Sbjct: 225 KMKVSENLMNRESYNIWLLGLVRIGKLLEAQ 255
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 78/165 (47%)
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y+ ++ K GR+ WL M A G P + +N L+ + + L +L+ +M
Sbjct: 24 YNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMP 83
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ P++ S+ ++ Y RA ++ E R G ++ + ++ F K + +
Sbjct: 84 EKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTD 143
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ KL+ +M+ +G D +++ ++AL +G ++A + ++ +
Sbjct: 144 DAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQ 188
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 201/482 (41%), Gaps = 39/482 (8%)
Query: 122 LLIRYLVQSKK-WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
LLI+ VQ+++ D +V + +LP T S ++ +R R+F++A
Sbjct: 150 LLIQTYVQNRRELDGLVVVRLMMDC-GILPQIRTLSGVLNGLIRIRQFRMA--------- 199
Query: 181 DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
LH++ +++ S+G+ D Y ++ + ++ D +
Sbjct: 200 ------------------LHLF-------DEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
+ +S D S Y + L K+ R +EA++ + KG+ D Y +L
Sbjct: 235 REVIGRMESSGCD---LSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTL 291
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ + E + EE+ E E G + LV ++G + D+V +K +
Sbjct: 292 VLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV 351
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
S + A++N K A ++ + +G P VTY+ +I+++C+ A
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+M + G V YSS+++ + K G++R A L +M A G +PNV IY SL+ +
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+ L +L+ EM + ++P+ ++T +IS A K + E + +
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+++ K +LL +M +G D Y ++ L G +A+ +
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL 591
Query: 601 EG 602
+G
Sbjct: 592 QG 593
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/482 (21%), Positives = 199/482 (41%), Gaps = 8/482 (1%)
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
+T + IR L ++++ V + + D T LV + +F+ ++
Sbjct: 251 ATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNE 310
Query: 178 FITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
I G + + A ++ + G K S + K+K G+ Y ++ + K G
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
++ +LF + L + Y IL DS K G+ AL F M E GI
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVT---YSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYP 427
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y+SLI + +++ A+ LF E G+ + + L+ Y +EG + + M
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT 487
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ + A+++G A K++ +++ IP +VTY +I +C+
Sbjct: 488 GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTV 547
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+A ++ EM +KG Y +++ TGR+ +A + ++ + + N +++L
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSAL- 606
Query: 477 DMHGRAKNLRQVEKL--WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+HG K R + L +EM R V D V Y+ +I R ++ + + G
Sbjct: 607 -LHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQG 665
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
D + M+ +K ++ L M SEG + Y + +N L GL +A+
Sbjct: 666 LRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAE 725
Query: 595 WL 596
L
Sbjct: 726 LL 727
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 111/545 (20%), Positives = 214/545 (39%), Gaps = 48/545 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P +++ ++ M KD + E + N K P T +LI + K D +
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHK--GLFPNDVTYSILIDSFCKRGKLDVAL 410
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ + S L++ + K + A +L I +G + ++ + S + GY
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K ++ +Y +M GI ++ + ++ + LF E +
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y +L + K G A + +M EKG++ D Y LI S V A E
Sbjct: 531 VT---YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREF 587
Query: 317 FKEAE-EKGMLRDPEVCLKLVLM-YIEEGLVEKTLD------------------------ 350
+ + E+ L E+C +L Y +EG ++ LD
Sbjct: 588 MNDLQGEQQKLN--EMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGI 645
Query: 351 -----------VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+++ M + L+ + + +++ +K A +++ ++S+GC+P
Sbjct: 646 LRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNV 705
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
VTY ++IN C+I L KAE + EM Y+ + G I A+ L
Sbjct: 706 VTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HD 764
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
+ +G N YN L+ + +++ ++ M ++PD +SY+T+I Y R +
Sbjct: 765 VLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGD 824
Query: 520 FDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+K + E +N GV +A ++ ++ + +L DM G K + Y+
Sbjct: 825 LKEAIKLW-ESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYN 883
Query: 579 SAMNA 583
S ++
Sbjct: 884 SLIHG 888
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 147/328 (44%), Gaps = 1/328 (0%)
Query: 257 FSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
FST + + +L + ++ R + L R M + GIL + ++ I + ++A
Sbjct: 142 FSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALH 201
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
LF E G+ D V +V E + +V+ M+++ +S + G
Sbjct: 202 LFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLC 261
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K + W AV++ L +G TY +++ C++ + E++ EM + GF
Sbjct: 262 KNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEA 321
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
A S++V K G I A LV K+K G P++++YN+L++ + L + E L+ M
Sbjct: 322 AVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNM 381
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + P+ V+Y+ +I ++ + + D+ + F + G ++ KL ++
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNA 583
L +M + G K + +Y S ++
Sbjct: 442 RAAKSLFDEMIANGLKPNVVIYTSLISG 469
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 105/532 (19%), Positives = 203/532 (38%), Gaps = 75/532 (14%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VP + + G+ K A+D N+ KK P LI + + K D
Sbjct: 317 VPSEAAVSNLVDGLRKKGNIGS-AFDLVNKVKKFG-VAPSLFVYNALINSMCKDGKLDEA 374
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
SL + + P+ T S L+ S + K +A L G + + ++S + G
Sbjct: 375 ESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISG 434
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ KL + ++++M + G+ + Y ++ Y K G+ L+ E + +
Sbjct: 435 HCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISP- 493
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+T+ + L L + R EA K F +M E ++ + Y LI A E
Sbjct: 494 --NTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE 551
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L E EKG++ D L+ G V + + + ++ + K++
Sbjct: 552 LLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLN------------ 599
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
++ ++++++ YC+ A EM +G +V
Sbjct: 600 -----------------------EMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLV 636
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
YS ++ + R + L+ +M +G P+ +Y +++D + +A NL+ LW M
Sbjct: 637 CYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIM 696
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFD----MCVKF--------------YNEFRMNGGVI 537
P+ V+YT +I+ + D +C + + ++ + G I
Sbjct: 697 VSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNI 756
Query: 538 DRAIA----------------GIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
++AI I++ F KL +I+E ++L +M G D
Sbjct: 757 EKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPD 808
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 183/388 (47%), Gaps = 5/388 (1%)
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYK 263
S + + E M G D + ++ K D + A FL+ +R + + S Y
Sbjct: 67 SALSLLETMIKRGYCPDMATHSMLINELCK-ADKIQEAQEFLQGMNRTISTRASSCFSYN 125
Query: 264 ILCDSLGKSGRAFEALKFFRDM-KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
L +SL K+ + +A F M E+ ++ D Y+ LI F I E+ AE+L+K+ +
Sbjct: 126 SLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMID 185
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
+ + + + +G + V E M +A +++GFS R +
Sbjct: 186 LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQ 245
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A +++E +IS+GC P VTY +++ C+ + +A ++F +M ++G D V Y++++
Sbjct: 246 AHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLY 305
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ G+I A+ + +M +KG +P+V YN L+ RA + +L++ M R+ P
Sbjct: 306 GFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKP 365
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA--GIMVGVFSKLSQIEELVK 560
D VS+ +I ++A+ D V+ + + G + ++ G+ + ++ E +K
Sbjct: 366 DTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGE-QRLSEAMK 424
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ +++ D ++ + A+ AG
Sbjct: 425 VFKEIDRLKLSPDPHAFNVLLEAMYAAG 452
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 150/337 (44%), Gaps = 4/337 (1%)
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
LC S GK +AFEA + ++ S+I V A L + ++G
Sbjct: 21 LCKS-GKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLETMIKRG 79
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESM-KNAKLKISDCIS-CAIVNGFSKRRGYWA 382
D L+ + +++ + ++ M + + S C S +++N K +
Sbjct: 80 YCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQ 139
Query: 383 AVKVYEQLISQ-GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A ++ ++S+ +P V+Y+ +I+ +C+I +AEK++ +M V Y++ +
Sbjct: 140 AFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFL 199
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ GRI DA + +M + GC P+V Y++L+ A+ Q +L++ M R
Sbjct: 200 NGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCR 259
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ V+Y ++ + + D + + + G D+ ++ F + +IE+ V++
Sbjct: 260 PNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEV 319
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+M S+G D Y+ + AG +A+ L Q
Sbjct: 320 FDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQ 356
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 115/295 (38%), Gaps = 46/295 (15%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
++ VPD + + G K + A Y + L P +T + L++ +
Sbjct: 151 RSVVPDVVSYSILIDGFCKIDELGR-AEKLYKQMIDL-NCVPNVTTYNAFLNGLMRKGRI 208
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
+ E+ PD T S L+ ARK A+ L + I+ G + +N
Sbjct: 209 ADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCL 268
Query: 193 MGGY------NKLH---------------MYYSTIL--------------VYEKMKSAGI 217
+ G ++ H + Y+T+L V+++M S G
Sbjct: 269 LHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGH 328
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFE 277
D Y +++ +++ G + LF SR+ S + I+ D L K+ R +
Sbjct: 329 DPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVS---HNIMIDGLSKAKRLDD 385
Query: 278 ALKFFRDM-KEKGILEDPSIYASLICSFASITEVKLAE--ELFKEAEEKGMLRDP 329
A++ F M ++ G D Y SLI F E +L+E ++FKE + + DP
Sbjct: 386 AVEVFERMEQDHGCSPDLVTYNSLI--FGLCGEQRLSEAMKVFKEIDRLKLSPDP 438
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/471 (18%), Positives = 216/471 (45%), Gaps = 18/471 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + +F+ GM K T A + + +++ +P +I L + +
Sbjct: 215 PDQITYGTFVDGMCKMGDTVS-ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSH 273
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGG 195
+L + + + P+ T + ++ + ++ A LLQ + + +I+ ++ +N+ +
Sbjct: 274 NLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEML-ERKISPNVVTYNALINA 332
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K ++ +Y++M GI+ ++ Y +++ + K + +F ++
Sbjct: 333 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 392
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
F+ + L D + R + ++ +M +G++ + Y +LI F + ++ A +
Sbjct: 393 VFT---FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALD 449
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS----------DC 365
L ++ G+ D C L+ + G ++ L++ ++M+ +K+ + D
Sbjct: 450 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDV 509
Query: 366 ISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
++ I + G + A ++YE++ +G +P +TY+S+I+ C+ + +A ++F+
Sbjct: 510 LTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVS 569
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M K F VV +++++ Y K GR+ D + L +M +G + IY +L+ + N
Sbjct: 570 MGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGN 629
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ +++EM V PD ++ +++ + E + V + +M+ G
Sbjct: 630 INGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSVG 680
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/536 (20%), Positives = 227/536 (42%), Gaps = 20/536 (3%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I+L D +P F+ + +++ + +L Y + ++ + R + + +LI
Sbjct: 66 IDLFSDMLRSRPLPSVIDFNKLMGAVVR-MERPDLVISLYQKMER-KQIRCDIYSFTILI 123
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGE 183
+ K +S + PD T + L+ C+ R + + Q+ D
Sbjct: 124 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD-- 181
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
+L F + M G + + + ++M G+ D Y ++ K+GD+ V+AL
Sbjct: 182 --VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDT--VSAL 237
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
L K ++ + +Y + D L K GR ++ F +M++KGI + Y +I
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
F A+ L +E E+ + + L+ +++EG + ++ + M + +
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
++++GF K+ AA ++ + ++GC P T+ ++I+ YC ++
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM ++G V Y++++ + G + A+ L +M + G P++ N+L+D
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477
Query: 484 NLRQVEKLWKEMERRK-----------VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
L+ +++K M++ K V PD ++Y +I +F + Y E
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 537
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G V D M+ K S+++E ++ M S+ + +++ +N AG
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG 593
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/489 (22%), Positives = 209/489 (42%), Gaps = 54/489 (11%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ ST +I +L ++ K + L ++ K V+PD +T + L+ S + + A
Sbjct: 451 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQAR 510
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + G +++ + + + Y K ++ +M AG ++ Y +++
Sbjct: 511 SWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGL 570
Query: 232 YKIGDSEKVAALFLEC-------------KSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
K G+S+K ++ + + DS + Y L D L K+ + +A
Sbjct: 571 CKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDA 630
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+ M G + IY +LI F + ++ A+E+F + G L
Sbjct: 631 QELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYL------------ 678
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
T+ S+ +A K R A+KV Q++ C P
Sbjct: 679 --------PTVHTYTSLIDAMFK---------------DRRLDLAIKVLSQMLESSCTPN 715
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
VTY ++I+ CRI KA K+ M+++G + VV Y+S++ GK+G++ ++ L
Sbjct: 716 VVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFT 775
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M +GC PN Y L++ A L + L EM++ Y +V+ + ++
Sbjct: 776 QMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF--SK 833
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD---ER 575
+F + E +G V + G+++ FSK ++E+ ++L ++M + L+ +
Sbjct: 834 KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKD 893
Query: 576 LYHSAMNAL 584
Y S + AL
Sbjct: 894 TYTSLIQAL 902
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 163/371 (43%), Gaps = 19/371 (5%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
M G V D+ Y +++ + EK LF E KS + P + Y IL DS K
Sbjct: 446 MMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKS--VGVIP-DVYTYTILIDSFCK 502
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
G +A +F +M+ G Y +L+ ++ +V A ++F + G +
Sbjct: 503 VGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTIT 562
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKI----------SDCIS------CAIVNGFS 375
LV + G +K +V M + +D I+ A+++G
Sbjct: 563 YSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLC 622
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A ++ + + S GC P + Y ++I+ +C++ A++VF M + G+ V
Sbjct: 623 KAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVH 682
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+S++ K R+ A+ ++++M C PNV Y +++D R ++ KL M
Sbjct: 683 TYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMM 742
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
E+R P+ V+YT++I ++ + DM ++ + + G + +++ +
Sbjct: 743 EKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLL 802
Query: 556 EELVKLLQDMK 566
+E LL +MK
Sbjct: 803 DEAHSLLSEMK 813
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A KVYE++++ C+ +V A+ C + + KA ++ M +KGF YS ++
Sbjct: 404 AEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVIT 463
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ ++ A L +MK+ G P+V+ Y L+D + + Q + EME +P
Sbjct: 464 FLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSP 523
Query: 503 DKVSYTTVISAYNRARE 519
V+YT ++ AY + ++
Sbjct: 524 SVVTYTALLHAYLKTKQ 540
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/335 (19%), Positives = 129/335 (38%), Gaps = 10/335 (2%)
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
+ G +AL+ +K+ G + Y +L+ A+ ++ + + KE E G D
Sbjct: 184 RHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKF 243
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
+EG L ++E K+ + +++G + + A+ ++
Sbjct: 244 TVGCFAQALCKEGRWSDALVMIE---REDFKLDTVLCTQMISGLMEASLFDEAISFLHRM 300
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
CIP VTY +++ + + +++ M +G + ++S+V Y
Sbjct: 301 RCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDY 360
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ------VEKLWKEMERRKVTPDK 504
A L+ +M GC P +YN + + L EK+++EM +K
Sbjct: 361 PYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNK 420
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
V+ +FD + G V D + ++ + ++E+ L Q+
Sbjct: 421 VNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQE 480
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQAQ-WLQQ 598
MKS G D Y +++ GL QA+ W +
Sbjct: 481 MKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDE 515
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/514 (21%), Positives = 222/514 (43%), Gaps = 9/514 (1%)
Query: 75 TAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
+ VPDA +++ + + D ++QE AK+ P+ + +I + +
Sbjct: 190 SCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVS 249
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAM 193
+L + V+PD T + +V + +AR A +L+ + G E + +N+ +
Sbjct: 250 KACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAII 309
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRK 251
GY+ + + ++ KM S G++ D+ + M + K G S+ +F + K
Sbjct: 310 HGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHM 369
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
D Y IL GR + F M +KGI+ + LI + A +
Sbjct: 370 PDIVS-----YSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMD 424
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A +F E + +G+ + L+ + G + ++ M + ++ + + +++
Sbjct: 425 EAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLI 484
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCI-PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+GF A + +++S+G P V ++SII++ C A+ VF + G
Sbjct: 485 HGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGD 544
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+V ++S++ Y G++ A ++ M + G EP+V N+L+ + ++ +
Sbjct: 545 RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLI 604
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L++EM +KV P V+Y V+ RA K ++E +G +D I++
Sbjct: 605 LFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC 664
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ +E + L + + K D + ++ +NAL
Sbjct: 665 RNDLTDEAITLFHKLGAMDCKFDITILNTMINAL 698
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 160/337 (47%), Gaps = 5/337 (1%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAEELFKE 319
Y + SL R+ EAL + M ++G P + + ++I F EV A LF E
Sbjct: 198 YNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNE 257
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+KG++ D +V + ++K V+ M + ++ AI++G+S G
Sbjct: 258 MVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCS-G 316
Query: 380 YW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+W + K++ ++ S+G IP VT++S +++ C+ AE++F M KG +V+YS
Sbjct: 317 HWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYS 376
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
++ Y GR D L M KG N N L+ H + + + ++ EM+ +
Sbjct: 377 ILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQ 436
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
V P+ V+Y+T+ISA+ R ++ +++ G + A+ ++ F + +
Sbjct: 437 GVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKA 496
Query: 559 VKLLQDMKSEGTKLDERLYHSA-MNALRDAGLQMQAQ 594
+ + +M S+G ++ S+ +++L G M AQ
Sbjct: 497 KEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQ 533
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/495 (17%), Positives = 201/495 (40%), Gaps = 21/495 (4%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQ--ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
+PD F SF+ + K +++ E + Y +P+ + +L+ ++
Sbjct: 334 IPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDI----VSYSILLHGYATEGRFA 389
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA---LLAFNS 191
+ +L ++ + H + L+++ A++ + +L G+ ++ +++
Sbjct: 390 DMNNLFHSMADKGIVSNCHCINILISA--HAKRGMMDEAMLVFTEMQGQGVRPNVVTYST 447
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ + ++ + + +M S GI ++ Y ++ + GD K E S+
Sbjct: 448 LISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKG 507
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITE 309
L + + + SL GR +A F + G + P+I + SLI + + +
Sbjct: 508 LHRP--NIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIG--DRPTIVTFNSLIDGYCLVGK 563
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
++ A + G+ D LV Y + G ++ L + M + K+K +
Sbjct: 564 MEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNI 623
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++G + AA K++ ++I G TY ++ CR L +A +F ++
Sbjct: 624 VLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD 683
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ ++M+ K R +A L A + G PNV Y ++ + ++ + +
Sbjct: 684 CKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEAD 743
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI--DRAIAGIMVG 547
++ ME+ P +I ++ D+ Y +++G +I + + +++
Sbjct: 744 TMFSSMEKSGCAPSSRLLNDIIRML--LQKGDIVKAGYYMSKVDGTIISLEASTTSLLMS 801
Query: 548 VFSKLSQIEELVKLL 562
+FS + E +K L
Sbjct: 802 LFSSKGKHREQIKFL 816
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 157/305 (51%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L D+ G+ + +A + + E + YA L+ ++ + ++ AE + E +
Sbjct: 168 YNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVISEMQ 227
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ G+ V + ++ EK ++V + MK + + + ++N + K +
Sbjct: 228 KNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQPM 287
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+++KV+ ++ + GC P TY +++NA+ R L KAE+VF EMQQ G + V AY++++
Sbjct: 288 SSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 347
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y + G + A + + M+ GCEP+ YN L+D +GRA ++ E ++E++++ +
Sbjct: 348 EAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMR 407
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P S+ ++SA+ ++ C + + +G D M+ + + +++++ +L
Sbjct: 408 PTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERL 467
Query: 562 LQDMK 566
L M+
Sbjct: 468 LGAME 472
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 210/462 (45%), Gaps = 32/462 (6%)
Query: 130 SKKWDSIVSLSE----------DFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
+++W+ I+++ E D YN+L DA+ R + +A +A
Sbjct: 142 NRQWEPIITVCEWILYRSSFRPDIICYNLLIDAYGQKRQLN---KAESIYMALLEAHCVP 198
Query: 180 TDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
T+ ALL G +LH I +M+ G+ + Y ++ K SEK
Sbjct: 199 TEDTYALLLRAYCNSG--QLHRAEGVI---SEMQKNGLPPTATVYNAYLDGLLKARCSEK 253
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
++ K + + +T Y ++ + GK+ + +LK F +MK G + Y +
Sbjct: 254 AVEVYQRMKKERCRT---NTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTA 310
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKN 357
L+ +FA + AEE+F+E ++ G +P+V LM Y GL + ++ M++
Sbjct: 311 LVNAFAREGLCEKAEEVFEEMQQAG--HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEH 368
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ +V+ + + + A +++L QG P ++ +++A+ + ++
Sbjct: 369 MGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVAR 428
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK-------AKGCEPNVW 470
E+V ++ + G A ++M+ YG+ GR+ D L+ M+ G P+
Sbjct: 429 CEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTS 488
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YN L++++GRA L ++E ++ + R + D V++T+ I AY R +E+ C++ + E
Sbjct: 489 TYNVLVNVYGRAGYLDRMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEM 548
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
G D A +++ S Q+E++ +++ M + L
Sbjct: 549 VDAGCYPDAGTAKVLLAACSDERQVEQVTAIVRSMHKDAKTL 590
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 99/197 (50%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + Y +I+AY + +KAE +++ + + Y+ ++ Y +G++ A +
Sbjct: 163 PDIICYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGV 222
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++M+ G P +YN+ +D +A+ + ++++ M++ + + +YT +I+ Y +
Sbjct: 223 ISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGK 282
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
A++ +K +NE + G + +V F++ E+ ++ ++M+ G + D
Sbjct: 283 AKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYA 342
Query: 577 YHSAMNALRDAGLQMQA 593
Y++ M A AGL A
Sbjct: 343 YNALMEAYSRAGLPQGA 359
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 156/323 (48%), Gaps = 3/323 (0%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
M + G D Y I+ KIG++ A LF K + P Y + DSL K
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFK--KMGEAGCQP-DVVTYSTIIDSLCK 57
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
R EAL F MK KGI + Y SLI + + + A + E ++ +
Sbjct: 58 DRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVT 117
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L+ ++ +EG V + V+++M ++ + +++NG+S + + A K+++ +I
Sbjct: 118 FSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMI 177
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
++GC P +Y +IN YC+ +A+++F EM +G +V+Y++++ + GR+R
Sbjct: 178 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 237
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+A L M G P++ Y+ L+D + L + +L++ M+ + P+ V Y +I
Sbjct: 238 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 297
Query: 512 SAYNRAREFDMCVKFYNEFRMNG 534
A ++R K ++E + G
Sbjct: 298 DAMCKSRNLKEARKLFSELFVQG 320
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 138/300 (46%)
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M +G D Y ++I I E A LFK+ E G D ++ ++
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V + LD+ MK + + +++ G + A + +++S +P VT++
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+IN +C+ +A V M + G + VV YSS++ Y + +A L M KG
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
C+P+V+ YN L++ + +AK + + ++L+ EM + +TPD VSY T+I +
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ NG + D I++ F K + + +L + M+S K + +Y+ ++A+
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 112/231 (48%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
I+NG K AA +++++ GC P VTY++II++ C+ ++A +F M+ K
Sbjct: 15 TIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAK 74
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G + Y+S++ R R+A ++ +M + PN+ ++ L+++ + N+ +
Sbjct: 75 GISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEA 134
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+ K M V P+ V+Y+++++ Y+ E K ++ G D I++
Sbjct: 135 RGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILING 194
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
+ K +I E +L +M +G D Y++ ++ L G +A L +N
Sbjct: 195 YCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 245
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 127/323 (39%), Gaps = 45/323 (13%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + + + KD + E A D ++ K P T LI+ L +W
Sbjct: 43 PDVVTYSTIIDSLCKDRRVNE-ALDIFSYMKA-KGISPNIFTYNSLIQGLCNFSRWREAS 100
Query: 138 SLSEDFKIYNVLPDAHTCSRLV-ASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
++ + N++P+ T S L+ C F+ L + E ++ ++S M GY
Sbjct: 101 AMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGY 160
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ V+E K +++ GC +
Sbjct: 161 S------LQAEVFEARKLFDVMITKGCKPDVFS--------------------------- 187
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y IL + K+ R EA + F +M +G+ D Y +LI + ++ A +L
Sbjct: 188 -----YNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDL 242
Query: 317 FKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
FK G L P++C +L+ + ++G + K + +M++ LK + + +++
Sbjct: 243 FKNMLTNGNL--PDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300
Query: 375 SKRRGYWAAVKVYEQLISQGCIP 397
K R A K++ +L QG P
Sbjct: 301 CKSRNLKEARKLFSELFVQGLQP 323
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/321 (19%), Positives = 139/321 (43%), Gaps = 4/321 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
PD HT + ++ + + A L + G + ++ +++ + K + +
Sbjct: 8 PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 67
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+ MK+ GI + Y +++ + +A+ E S L+ P + + +L +
Sbjct: 68 FSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMS--LNIMP-NIVTFSLLINI 124
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
K G FEA + M E G+ + Y+SL+ ++ EV A +LF KG D
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPD 184
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ Y + + + + M + L +++G + A +++
Sbjct: 185 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 244
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+++ G +P TY+ +++ +C+ +KA ++F MQ +V Y+ ++ K+
Sbjct: 245 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSR 304
Query: 449 RIRDAMWLVAKMKAKGCEPNV 469
+++A L +++ +G +PN+
Sbjct: 305 NLKEARKLFSELFVQGLQPNM 325
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 189/451 (41%), Gaps = 6/451 (1%)
Query: 128 VQSKKWDSIVSLSEDFKIYN-VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL 186
V + W + L E + + P+A + ++ +A + +A + + +
Sbjct: 190 VGQQNWQRALELYECLNLRHWYAPNARMVATILGVLGKANQEALAVEIFARAESSVGDTV 249
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+N+ MG Y + + + + M+ G V D + ++ A K G E AL L
Sbjct: 250 QVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLL 309
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+ R+ P Y L + + EA+ F DM+ D Y ++I +
Sbjct: 310 NEVRRSGIRP-DIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGR 368
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
+ AEELFKE E KG D L+ + EG EK D+ E M +
Sbjct: 369 CARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMT 428
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
I++ + K+ + A+++Y + S G P VTY +I++ + + +A V EM
Sbjct: 429 YNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEML 488
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
G + YS+++ Y K G+ +A M+ G +P+ Y+ ++D R ++
Sbjct: 489 DAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMK 548
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ L+ EM R TPD Y ++ A R +D+ + + G+ + I+ ++V
Sbjct: 549 KAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRDMEELSGMNPQVISSVLV 608
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
K + K+L+ S G +LD ++
Sbjct: 609 ----KGGCYDHAAKMLKVAISNGYELDHEIF 635
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 141/300 (47%), Gaps = 5/300 (1%)
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
A+++ + LA E+F AE + +V ++ +Y G K ++++ M+
Sbjct: 219 ATILGVLGKANQEALAVEIFARAE-SSVGDTVQVYNAMMGVYARNGRFSKVKELLDLMRE 277
Query: 358 AKLKISDCISCAIVNGFSKRRGYWA---AVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
+ D +S + + G A+++ ++ G P +TY ++I+A R +
Sbjct: 278 RGC-VPDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRESN 336
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+A VF +M+ + Y++M+++YG+ R R A L ++++KG P+ YNS
Sbjct: 337 LEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNS 396
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L+ R N +V + +EM +R D+++Y T+I Y + D ++ Y + + +G
Sbjct: 397 LLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSG 456
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
D +++ K S++EE ++ +M G K Y + + A AG + +A+
Sbjct: 457 RNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAE 516
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/405 (19%), Positives = 175/405 (43%), Gaps = 49/405 (12%)
Query: 241 AALFLECKSRKLDSTP------------FSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
A + + CK++KLD+ S MY+ L ++ A + F DM+
Sbjct: 672 ALIIILCKAKKLDAALEEYRSKGELGQFRSCTMYESLIQECIQNELFDVASQIFSDMRFN 731
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC--LKLVLMYIEEGLVE 346
G+ +Y ++ + + + A L AE+ G++ D ++ + +V Y + + +
Sbjct: 732 GVESSECLYQGMVSVYCRMDLPETAHHLLYHAEKNGIILDNDISVYIDIVETYGKLKIWQ 791
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG-------- 398
K +V S++ K+ + A+++ ++ Y A ++ ++ G P
Sbjct: 792 KAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLL 851
Query: 399 ------------------------QVTYASII---NAYCRIALYSKAEKVFIEMQQKGFD 431
+++ +SI+ A+ + + +K++ M+ G+
Sbjct: 852 QALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYF 911
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ Y M+ + K R+RD ++ +M+ G +P++ I NS++ ++ ++ + + +
Sbjct: 912 PTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGII 971
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+++++ + PD+ +Y T+I Y R R + N+ R G ++ F+K
Sbjct: 972 YQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNK 1031
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
E+ +L ++++S G KLD YH M R +G +A+ L
Sbjct: 1032 QRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENL 1076
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/492 (19%), Positives = 201/492 (40%), Gaps = 57/492 (11%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCS---RLVASCVRARKFKIANTLLQVFI 179
LI L ++KK D+ + E+++ L +C+ L+ C++ F +A+ +
Sbjct: 673 LIIILCKAKKLDAAL---EEYRSKGELGQFRSCTMYESLIQECIQNELFDVASQIFSDMR 729
Query: 180 TDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS--GCYCQIMEAYYKIGD 236
+G E + + + Y ++ + + + + GI+LD+ Y I+E Y K+
Sbjct: 730 FNGVESSECLYQGMVSVYCRMDLPETAHHLLYHAEKNGIILDNDISVYIDIVETYGKLKI 789
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+K +L + R C + D +
Sbjct: 790 WQKAESLVGSLRQR---------------CSKM-----------------------DRKV 811
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRD-PEVCLKLVLMYIEEGLVEKTLD----V 351
+ +LI ++A + A +F M+RD P + V ++ +V++ L+ V
Sbjct: 812 WNALIHAYAFSGCYERARAIFNT-----MMRDGPSPTVDSVNGLLQALIVDRRLNELYVV 866
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++ +++ LKIS + F++ + K+Y + + G P Y ++ C+
Sbjct: 867 IQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCK 926
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
E + EM++ GF + +S++ +Y + + K++ +P+
Sbjct: 927 CKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEET 986
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
YN+L+ M+ R + + L +M + P +Y ++I+A+N+ R ++ + + E R
Sbjct: 987 YNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELR 1046
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
NG +DRA +M+ + + LL MK G + H M + +G
Sbjct: 1047 SNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPE 1106
Query: 592 QAQWLQQNFEGT 603
+A+ + +N T
Sbjct: 1107 EAENVLKNLRTT 1118
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 156/343 (45%), Gaps = 23/343 (6%)
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
N LLQ I D + N+L+ +V ++++ G+ + +EA+
Sbjct: 848 NGLLQALIVDRRL------------NELY------VVIQELQDMGLKISKSSILLTLEAF 889
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ G+ +V ++ K+ T H+Y+I+ L K R + +M+E G
Sbjct: 890 AQAGNLFEVQKIYNGMKAAGYFPT---MHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQ 946
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
D I S++ + I + K ++++ ++ + D E L++MY + E+ +
Sbjct: 947 PDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSL 1006
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+ M++ L+ +++ F+K+R Y A +++E+L S G + Y ++ Y
Sbjct: 1007 MNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRT 1066
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ KAE + M++ G + + ++ YGK+G+ +A ++ ++ G +
Sbjct: 1067 SGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLP 1126
Query: 472 YNSLMDMHGRAKNLRQ-VEKLWKEMERRKVTPDKVSYTTVISA 513
Y+S++D + + + + +EKL EM+ + PD +T I A
Sbjct: 1127 YSSVIDAYLKKGDFKAGIEKL-TEMKEAGIEPDHRIWTCFIRA 1168
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 153/369 (41%), Gaps = 54/369 (14%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQ-ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
VPD F++ ++ +K + LA NE ++ RP+ T LI + +
Sbjct: 281 VPDLVSFNTLINARMKSGAMEPNLALQLLNEVRR-SGIRPDIITYNTLISACSRESNLEE 339
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVA---SCVRARKFKIANTLLQVFITDGEIALLAFNSA 192
V++ D + + PD T + +++ C RARK +
Sbjct: 340 AVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAE----------------------- 376
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
++++++S G D+ Y ++ A+ + G++EKV + E R
Sbjct: 377 --------------ELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGF 422
Query: 253 --DSTPFST--HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
D ++T HMY GK GR +A++ +RDMK G D Y LI S +
Sbjct: 423 GQDEMTYNTIIHMY-------GKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKAS 475
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+V+ A + E + G+ L+ Y + G E+ + M+ + +K
Sbjct: 476 KVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYS 535
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ- 427
+++ F + A+ +Y ++I +G P Y +++A R ++ +++ +M++
Sbjct: 536 VMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRDMEEL 595
Query: 428 KGFDKCVVA 436
G + V++
Sbjct: 596 SGMNPQVIS 604
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 126/345 (36%), Gaps = 70/345 (20%)
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
++ ++G FE K + MK G +Y ++ V+ E + E EE G
Sbjct: 887 EAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQ 946
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D ++C ++ +Y L I D S I+
Sbjct: 947 PDLQICNSILKLY--------------------LGIEDFKSMGII--------------- 971
Query: 387 YEQLISQGCIPGQVTYASIINAYCR----------------------------------- 411
Y+++ P + TY ++I YCR
Sbjct: 972 YQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNK 1031
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+Y +AE++F E++ G+ Y M+ Y +G R A L+A MK G EP +
Sbjct: 1032 QRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTIST 1091
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+ LM +G++ + E + K + V D + Y++VI AY + +F ++ E +
Sbjct: 1092 MHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMK 1151
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
G D I + + E + LL ++ G L RL
Sbjct: 1152 EAGIEPDHRIWTCFIRAATLSEGTNEAIVLLNALQDAGFDLPIRL 1196
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD--AMWLVA 458
Y +++ Y R +SK +++ M+++G +V++++++ K+G + A+ L+
Sbjct: 251 VYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLN 310
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+++ G P++ YN+L+ R NL + ++ +ME + PD +Y +IS Y R
Sbjct: 311 EVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCA 370
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ + E G D ++ FS+ E++ + ++M G DE Y+
Sbjct: 371 RARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYN 430
Query: 579 SAMNALRDAGLQMQAQWLQQNFEGT 603
+ ++ G QA + ++ + +
Sbjct: 431 TIIHMYGKQGRHDQAMQIYRDMKSS 455
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 102/534 (19%), Positives = 224/534 (41%), Gaps = 16/534 (2%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
EL ++ + PDA ++S L+ ++ T+++ D E K F ++ T +I
Sbjct: 377 ELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVR-DICEEMVKR-GFGQDEMTYNTIIH 434
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EI 184
+ + D + + D K PDA T + L+ S +A K + A ++ + G +
Sbjct: 435 MYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKP 494
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
L +++ + Y K + M+ +GI D Y +++ + + + +K L+
Sbjct: 495 TLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLY 554
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E TP +Y+++ +L + + RDM+E + +P + +S++
Sbjct: 555 HEMIREGF--TP-DNGLYEVMMHALVRENMWDVVDRIIRDMEELSGM-NPQVISSVLVKG 610
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
A ++ K A G D E+ L ++ Y + +++E +
Sbjct: 611 GCYDH---AAKMLKVAISNGYELDHEIFLSIMSSYSSSARYSEACELLEFSREHAPNDIQ 667
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
I+ A++ K + AA++ Y G Y S+I + L+ A ++F +
Sbjct: 668 MITEALIIILCKAKKLDAALEEYRSKGELGQFRSCTMYESLIQECIQNELFDVASQIFSD 727
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC--EPNVWIYNSLMDMHGRA 482
M+ G + Y MV++Y + A L+ + G + ++ +Y +++ +G+
Sbjct: 728 MRFNGVESSECLYQGMVSVYCRMDLPETAHHLLYHAEKNGIILDNDISVYIDIVETYGKL 787
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG--GVIDRA 540
K ++ E L + +R D+ + +I AY + ++ +N +G +D +
Sbjct: 788 KIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVD-S 846
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ G++ + ++ EL ++Q+++ G K+ + + A AG + Q
Sbjct: 847 VNGLLQALIVD-RRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQ 899
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 141 EDFKIYNVL----------PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAF 189
EDFK ++ PD T + L+ R R+ + +L+ + G E L +
Sbjct: 963 EDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTY 1022
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
S + +NK MY ++E+++S G LD Y +M+ Y GD K L K
Sbjct: 1023 RSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKE 1082
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
++ T + H+ + S GKSG+ EA ++++ G++ D Y+S+I ++ +
Sbjct: 1083 SGIEPTISTMHLLMV---SYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGD 1139
Query: 310 VKLAEELFKEAEEKGMLRD 328
K E E +E G+ D
Sbjct: 1140 FKAGIEKLTEMKEAGIEPD 1158
>gi|242094172|ref|XP_002437576.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
gi|241915799|gb|EER88943.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
Length = 429
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 179/392 (45%), Gaps = 4/392 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP LIR L ++ + +L + + + PDA + L+ + A ++A+
Sbjct: 7 RPSSGAYARLIRALSRAGRALEAEALLLEMRRHGPRPDAAHYNALLEGLLAAAHLRLADR 66
Query: 174 LLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
LL DG + +G Y + + V +M+ GI LD+ Y ++ Y
Sbjct: 67 LLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRRGIRLDTAGYSMLVRLYR 126
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
G +K L +E + ++ +Y L D+ GK G+ +A + F M+ +GI
Sbjct: 127 DNGMWKKAIDLVMEMQEVGVE---LDVKIYSGLIDTFGKYGQLADARRVFDKMRAEGIKP 183
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
D S + +LI + +K A F +E+GM DP++ + ++ E+G ++ +
Sbjct: 184 DISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLF 243
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ MKN K S + +V+ + + + A + L ++ + + NAY +
Sbjct: 244 DGMKNRGFKESGAVYAVLVDIYGQYGHFRDARECIAALRAENMQLSPRVFCVLANAYAQQ 303
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
L + V M+++GF+ +V + ++ +G GR +A+ + +K G P+V Y
Sbjct: 304 GLCEQTVNVLQLMEEEGFEPNLVMLNLLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTY 363
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+LM RAK +V ++++EMER TPD+
Sbjct: 364 TTLMKTFMRAKKFEKVSEVYREMERAGCTPDR 395
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/398 (20%), Positives = 165/398 (41%), Gaps = 73/398 (18%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
M+++G SG Y +++ A + G + A L + R+ P + H Y L + L
Sbjct: 1 MQASGGRPSSGAYARLIRALSRAG--RALEAEALLLEMRRHGPRPDAAH-YNALLEGLLA 57
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+ A + M + G+ + Y L+ ++A ++ + + E +G+ D
Sbjct: 58 AAHLRLADRLLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRRGIRLDTAG 117
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
LV +Y + G+ +K +D+V M+ +++ I +++ F K A +V++++
Sbjct: 118 YSMLVRLYRDNGMWKKAIDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRVFDKMR 177
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ------------------------ 427
++G P T+ ++I +CR+ +A + F MQ+
Sbjct: 178 AEGIKPDISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWD 237
Query: 428 -----------KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK------------- 463
+GF + Y+ +V +YG+ G RDA +A ++A+
Sbjct: 238 EIKKLFDGMKNRGFKESGAVYAVLVDIYGQYGHFRDARECIAALRAENMQLSPRVFCVLA 297
Query: 464 ----------------------GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
G EPN+ + N L++ G A + +++ ++ ++
Sbjct: 298 NAYAQQGLCEQTVNVLQLMEEEGFEPNLVMLNLLINAFGTAGRHLEALAVFQHIKDSGMS 357
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
PD V+YTT++ + RA++F+ + Y E G DR
Sbjct: 358 PDVVTYTTLMKTFMRAKKFEKVSEVYREMERAGCTPDR 395
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 149/332 (44%), Gaps = 35/332 (10%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S+ Y L +L ++GRA EA +M+ G D + Y +L+ + ++LA+ L
Sbjct: 9 SSGAYARLIRALSRAGRALEAEALLLEMRRHGPRPDAAHYNALLEGLLAAAHLRLADRLL 68
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+ + G+ R+ L+ Y G +E + V+ M+ R
Sbjct: 69 LQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMR--------------------R 108
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
RG +L + G Y+ ++ Y ++ KA + +EMQ+ G + V Y
Sbjct: 109 RGI--------RLDTAG-------YSMLVRLYRDNGMWKKAIDLVMEMQEVGVELDVKIY 153
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
S ++ +GK G++ DA + KM+A+G +P++ +N+L+ H R N+++ + + M+
Sbjct: 154 SGLIDTFGKYGQLADARRVFDKMRAEGIKPDISTWNALIQWHCRVGNMKRALRFFTSMQE 213
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ PD + +IS ++D K ++ + G A+ ++V ++ + +
Sbjct: 214 EGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMKNRGFKESGAVYAVLVDIYGQYGHFRD 273
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ + +++E +L R++ NA GL
Sbjct: 274 ARECIAALRAENMQLSPRVFCVLANAYAQQGL 305
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%)
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
MQ G AY+ ++ + GR +A L+ +M+ G P+ YN+L++ A +
Sbjct: 1 MQASGGRPSSGAYARLIRALSRAGRALEAEALLLEMRRHGPRPDAAHYNALLEGLLAAAH 60
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
LR ++L +M V ++ +YT ++ AY RA + E R G +D A +
Sbjct: 61 LRLADRLLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRRGIRLDTAGYSM 120
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+V ++ ++ + L+ +M+ G +LD ++Y ++ G
Sbjct: 121 LVRLYRDNGMWKKAIDLVMEMQEVGVELDVKIYSGLIDTFGKYG 164
>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 182/399 (45%), Gaps = 3/399 (0%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ +N+ M GY K ++YE+MKS + D + ++ +Y+ G E L
Sbjct: 254 VVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLL- 312
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ + + +Y I L +G EA+KF DM EKGI + S+I +++
Sbjct: 313 --RDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYS 370
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ A + ++ + G+ C L++ + +++ D++ M L I+
Sbjct: 371 RAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKA 430
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
+++G+ + A ++ ++ +G P V +++ IN + L +A VF++M
Sbjct: 431 AFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQM 490
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+KGF Y+S++ + +GR+++A+ L +M KG P+++ N +++ + +
Sbjct: 491 SKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRM 550
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ +++ M + PD V+Y T+I Y +A + + N+ G D I
Sbjct: 551 KSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIR 610
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ ++ V +L+++ S G D Y++ MN +
Sbjct: 611 LHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGV 649
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 170/418 (40%), Gaps = 51/418 (12%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
+C+ + + K+G+S L C +K P + Y IL ++ G+ F+AL + R
Sbjct: 159 FCR--KGHVKVGES-------LLCVMQKFKCQP-DVYAYNILINAYCTRGQTFDALGWMR 208
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIE 341
M + G + ++I +F + + A LF +E G + P V LM Y++
Sbjct: 209 FMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHI--PNVVCYNTLMNGYVK 266
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY--------------------- 380
+ + + E MK +K DC + I+ R G
Sbjct: 267 ARDIGQANMLYEEMK-SKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISS 325
Query: 381 ----------WA-----AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
WA A+K E ++ +G P V + SII AY R L KA K + M
Sbjct: 326 LYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMM 385
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+ G + SS++ K R+++A L+ +M +G N + L+D + R ++
Sbjct: 386 VKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDV 445
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
LW EME R + PD V+++ I+ + D + + G + + + +
Sbjct: 446 AGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSL 505
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
+ F +++E + L ++M +G D + +N L G A + +N T
Sbjct: 506 IRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHT 563
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 126/304 (41%), Gaps = 5/304 (1%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYS 204
+ + P + TCS L+ + + + A LL I +G I AF + GY ++
Sbjct: 388 FGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAG 447
Query: 205 TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKI 264
++ +M+ GI D+ + + +G ++ +FL+ + F +Y
Sbjct: 448 AYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNF---VYNS 504
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L SGR EAL R+M KG+L D +I +K A ++F+ G
Sbjct: 505 LIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTG 564
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
++ D L+ Y + T +VV M ++G R AV
Sbjct: 565 LIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAV 624
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+ E+LIS G +P VTY +++N C L +A V ++ + F VV + +++ +
Sbjct: 625 MMLEELISAGVVPDTVTYNTVMNGVCTDVL-ERAMIVTAKLLKMAFVPNVVTANLLLSHF 683
Query: 445 GKTG 448
K G
Sbjct: 684 CKQG 687
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 10/230 (4%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQ----GCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
A++ GF R+G+ VKV E L+ C P Y +INAYC A
Sbjct: 154 AVILGFC-RKGH---VKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRF 209
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M G +V + +++ + G + +A L MK G PNV YN+LM+ + +A++
Sbjct: 210 MIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARD 269
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNR-AREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ Q L++EM+ + V PD ++ +++ + R RE D + + +G + ++
Sbjct: 270 IGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDR-DRLLRDLSQSGSLSISSLYN 328
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
I V ++E +K L+DM +G ++S + A AGL+ +A
Sbjct: 329 ICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKA 378
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 107/252 (42%), Gaps = 6/252 (2%)
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ L++V M+ L+ S + + + + K+ +I QG P + ++I
Sbjct: 97 EALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVI 156
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
+CR E + MQ+ V AY+ ++ Y G+ DA+ + M GC
Sbjct: 157 LGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCT 216
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P++ + ++++ N+ + L+ M+ P+ V Y T+++ Y +AR+
Sbjct: 217 PSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANML 276
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
Y E + D I+V + + E+ +LL+D+ G+ LY+ ++ L
Sbjct: 277 YEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCW 336
Query: 587 AGLQMQAQWLQQ 598
AG WL +
Sbjct: 337 AG------WLDE 342
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 97/231 (41%), Gaps = 2/231 (0%)
Query: 345 VEKTLDVVESM--KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
V+++ +VVE M ++A+ + + ++ GF K A+++ ++ G P
Sbjct: 58 VDRSREVVEFMWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAI 117
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+ RI + K+ M +G C +++++ + + G ++ L+ M+
Sbjct: 118 TILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQK 177
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
C+P+V+ YN L++ + + M TP V++ TVI+A+
Sbjct: 178 FKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMME 237
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
++ + G + + ++ + K I + L ++MKS+ D
Sbjct: 238 ARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPD 288
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 3/140 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PDA F +F++G+ E AYD + + K F P LIR S + +
Sbjct: 462 PDAVAFSAFINGLSIVGLVDE-AYDVFLQMSK-KGFMPNNFVYNSLIRGFCNSGRLQEAL 519
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
L + +LPD T + ++ + + K A+ + + G I ++ +N+ + GY
Sbjct: 520 MLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGY 579
Query: 197 NKLHMYYSTILVYEKMKSAG 216
K ST V KM + G
Sbjct: 580 CKAFDTVSTDEVVNKMYATG 599
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 176/406 (43%), Gaps = 18/406 (4%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ +++ + + KL Y ++++MK G+ Y I+ Y+K+ E L E
Sbjct: 231 ITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEE 290
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
K + T F+ Y L LGK GR +A F +M + G D + +LI
Sbjct: 291 MKGKGCAPTVFT---YTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGR 347
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVES------MKNA 358
++ A +LF + D C V+ Y + + + E E+ MK
Sbjct: 348 AGRLEDALKLFGKM-------DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKAN 400
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+ S +++GF K A+ + E++ +G P Y S+I++ R Y A
Sbjct: 401 GIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAA 460
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
++F E+++ Y+ M+ +G GR+ DA+ L +MK GC P+V+ YN+LM
Sbjct: 461 NELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSG 520
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
RA + + L + M TPD S+ +++ + ++ + + + + + D
Sbjct: 521 MIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPD 580
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ S+ E KL+++MK +G + D Y S + A+
Sbjct: 581 AVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAV 626
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 166/378 (43%), Gaps = 5/378 (1%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
+ +I++ K K ++F + K RK + T +Y L L G + + +
Sbjct: 162 WSEILKILGKAKMVNKALSVFYQIKGRKCNPT---ATVYNTLILMLMHEGHHEKIHELYN 218
Query: 284 DMKEKGILEDPSI-YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
++ +G +I Y++LI +F + A LF E +E G+ ++ ++ MY +
Sbjct: 219 EICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKL 278
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
VE L +VE MK + ++ G K A ++ ++ GC P V
Sbjct: 279 NKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLI 338
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDAMWLVAKMK 461
++IN R A K+F +M VV Y++++ A++ +A KMK
Sbjct: 339 NNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMK 398
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
A G P+ + Y L+D + + + L +EM+ + P +Y ++I + RA+ ++
Sbjct: 399 ANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYE 458
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ + E + N G + +M+ F ++ + V L +MK G D Y++ M
Sbjct: 459 AANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALM 518
Query: 582 NALRDAGLQMQAQWLQQN 599
+ + AG+ +A L +N
Sbjct: 519 SGMIRAGMIDEAHSLMRN 536
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 179/443 (40%), Gaps = 40/443 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + + K + + A+ ++E K+ EK +L Y + K ++ +
Sbjct: 228 PDTITYSALISAFGK-LERYDFAFRLFDEMKENGLHPTEKIYTTILAMYF-KLNKVEAAL 285
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L E+ K P T + L+ + + A +L + DG + ++ N+ +
Sbjct: 286 RLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINIL 345
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + ++ KM S + Y +++A ++ AAL+ E K +
Sbjct: 346 GRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFE--KMKANGIA 403
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
S+ Y IL D K+ R +AL +M EKG P+ Y SLI S + A EL
Sbjct: 404 PSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANEL 463
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F+E +E V ++ + G ++SD
Sbjct: 464 FQELKENCGRSSARVYAVMIKHFGNCG-----------------RLSD------------ 494
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
AV ++ ++ GC P TY ++++ R + +A + M++ G + +
Sbjct: 495 ------AVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKS 548
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
++ ++ KTG + A+ + KMK P+ YN+++ RA KL +EM+
Sbjct: 549 HNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMK 608
Query: 497 RRKVTPDKVSYTTVISAYNRARE 519
+ D ++Y++++ A + E
Sbjct: 609 LKGFEYDSITYSSILEAVGKVDE 631
>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 607
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 212/478 (44%), Gaps = 10/478 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ S +I + +W V + + PDA + + +C R ++KIA L
Sbjct: 66 PDLSAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDL 125
Query: 175 L-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L ++ D ++ +NSA+ K + + + ++M + G+ D Y + A +
Sbjct: 126 LREMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGR 185
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G E+ LF + ++ + + Y + GR EA+ R + G+ +
Sbjct: 186 GGRWEEALELFEDMRTSGVAPDVIT---YGSAIAACANGGRWKEAVSLLRKIPTVGLTPN 242
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDV 351
Y+S+I + A + K+A +L +E K M P + + + G ++ +D+
Sbjct: 243 VISYSSVITACAKEGQWKIALDLLREM--KAMRLAPNIITYNAAIDACAKGGRWKEAIDL 300
Query: 352 VESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ M L D +S ++++ SK + A+ + ++ + G P ++Y S I+A
Sbjct: 301 LREMPTVGLP-PDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACA 359
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ + +A+ + EM G + V+ Y+S +A K + ++A+ L+ +M G V+
Sbjct: 360 KGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVF 419
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
Y+S +D G+ + ++L +EM + P++V Y + I A R +++ V E
Sbjct: 420 SYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREM 479
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G D + +K Q +E + +L++M + G D Y+SA++A G
Sbjct: 480 PTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGG 537
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 202/476 (42%), Gaps = 6/476 (1%)
Query: 64 TIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLL 123
++L R+ + P+ ++S ++ K Q E+A E + P+ +
Sbjct: 122 ALDLLREMLARDVTPNVIIYNSAINSCAKAGQ-WEIAVSLVKEMATV-GLAPDVISYSSA 179
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE 183
I + +W+ + L ED + V PD T +A+C ++K A +LL+ T G
Sbjct: 180 ISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGL 239
Query: 184 IA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+++++S + K + + + +MK+ + + Y ++A K G ++
Sbjct: 240 TPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAID 299
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L E + L P Y + D+ K R EA+ R+M G+ + Y S I
Sbjct: 300 LLREMPTVGL---PPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAID 356
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ A + K A+ L +E G+ + + + ++ L ++ M L
Sbjct: 357 ACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHT 416
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
+ + ++ K + A ++ ++ + G P +V Y S I+A R + +A +
Sbjct: 417 TVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLL 476
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
EM G V +YSS +A K + ++A+ ++ +M A G P++ YNS +D +
Sbjct: 477 REMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKG 536
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ L EM +TP+ +SY++ I A R ++ + E R +G V D
Sbjct: 537 GRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSGVVPD 592
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 157/347 (45%)
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
+KL Y + + G+ G+ +A++ R+M +G D S Y+++I + A +
Sbjct: 24 KKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQ 83
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
K+A E KG+ D + G + LD++ M + + I +
Sbjct: 84 WKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNS 143
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+N +K + AV + +++ + G P ++Y+S I+A R + +A ++F +M+ G
Sbjct: 144 AINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSG 203
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
V+ Y S +A GR ++A+ L+ K+ G PNV Y+S++ + +
Sbjct: 204 VAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIAL 263
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
L +EM+ ++ P+ ++Y I A + + + E G D ++
Sbjct: 264 DLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDAC 323
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
SK + +E + +L++M + G + Y+SA++A G +A+ L
Sbjct: 324 SKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGL 370
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 165/416 (39%), Gaps = 50/416 (12%)
Query: 62 FPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLK 121
PT+ L P+ + S + K+ Q + +A D E K + P T
Sbjct: 234 IPTVGLT---------PNVISYSSVITACAKEGQWK-IALDLLREMKAM-RLAPNIITYN 282
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
I + +W + L + + PD + S ++ +C + ++K A +L+ T
Sbjct: 283 AAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTV 342
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G +++NSA+ K + + +M +AG+ Y + A K ++
Sbjct: 343 GLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEA 402
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
AL E + L +T FS Y D+ GK +A + R+M G+ + Y S
Sbjct: 403 LALLREMPTVGLHTTVFS---YSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSA 459
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
I + + + A +L +E G+ D V Y
Sbjct: 460 IDACGRGDQWEEAVDLLREMPTVGLSPD-------VFSYS-------------------- 492
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
S +CA + + + A+ V +++ + G P + Y S I+A + + A
Sbjct: 493 --SAIAACAKGDQWKE------ALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVA 544
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ EM+ G +++YSS + + G+ ++ + L+ +M+ G P+V Y++LM
Sbjct: 545 LLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSGVVPDVITYHALM 600
>gi|414874000|tpg|DAA52557.1| TPA: hypothetical protein ZEAMMB73_743775 [Zea mays]
Length = 630
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 195/461 (42%), Gaps = 48/461 (10%)
Query: 80 AKKFDSFLHGMLKDPQTQELAYDYYNEA-KKLPEFRPEKSTLKLLIRYLVQSKKWD---- 134
A SF +L+ P L ++ + + P P + LL++ + S
Sbjct: 116 ATTHHSFNSALLRFPLPLHLLPAFFTHSILRFPGLTPTLLSFNLLLKCICSSMVPRNPGL 175
Query: 135 ----SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFN 190
++ L + +N++PD T S +V++ A + A L+ + DG ++ AFN
Sbjct: 176 YLAVALGILHDVIPAWNLVPDKFTYSTVVSALADAGCVEEAVALVHEMVVDGVVSAEAFN 235
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+++A + GD LF +
Sbjct: 236 -----------------------------------PVLKAMLRAGDVNGAVKLF---RFM 257
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+L + Y +L L G A A+ R M+ +GI+ Y +++ V
Sbjct: 258 QLKGCTLTAVTYNVLLHGLLLCGEARAAMNIMRRMENEGIVPGLMTYGAVVDGLVKCGRV 317
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
+ A ++ +E +G+ V ++ + + G V++ L V E+M A++K + + A+
Sbjct: 318 EDAWKVAQEMGGQGLAPSEFVFSAVITGFCKSGEVDRALMVWETMVAARVKPNVVLYSAM 377
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++GF++ A K++E+++ CIP VTY+S++ Y IA S+A + EM + G
Sbjct: 378 IDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHIANSSRALSTWEEMIKVGC 437
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
++YS +++ GR++DAM + M +GC P+ Y S+M + + +
Sbjct: 438 VPTAISYSILISGLCDVGRLKDAMMVWKNMIGRGCAPDTIAYTSMMKGLCMSGMVDGGLR 497
Query: 491 LWKEM-ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
L+ +M + PD +SY ++ A R + + N+
Sbjct: 498 LFNDMLAKGDAKPDVISYNVLLDALIRTNDLPRAMDLLNQM 538
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 174/415 (41%), Gaps = 20/415 (4%)
Query: 167 KFKIANTLLQVFITDGEI-------ALLAFN-------SAMGGYNK-LHMYYSTILVYEK 211
+F + LL F T + LL+FN S+M N L++ + ++++
Sbjct: 128 RFPLPLHLLPAFFTHSILRFPGLTPTLLSFNLLLKCICSSMVPRNPGLYLAVALGILHDV 187
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
+ + +V D Y ++ A G E+ AL E +D S + + ++ +
Sbjct: 188 IPAWNLVPDKFTYSTVVSALADAGCVEEAVALVHE---MVVDGV-VSAEAFNPVLKAMLR 243
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+G A+K FR M+ KG Y L+ E + A + + E +G++
Sbjct: 244 AGDVNGAVKLFRFMQLKGCTLTAVTYNVLLHGLLLCGEARAAMNIMRRMENEGIVPGLMT 303
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
+V ++ G VE V + M L S+ + A++ GF K A+ V+E ++
Sbjct: 304 YGAVVDGLVKCGRVEDAWKVAQEMGGQGLAPSEFVFSAVITGFCKSGEVDRALMVWETMV 363
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+ P V Y+++I+ + R ++AEK+F EM +V YSSMV Y
Sbjct: 364 AARVKPNVVLYSAMIDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHIANSS 423
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
A+ +M GC P Y+ L+ L+ +WK M R PD ++YT+++
Sbjct: 424 RALSTWEEMIKVGCVPTAISYSILISGLCDVGRLKDAMMVWKNMIGRGCAPDTIAYTSMM 483
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDM 565
+ D ++ +N+ G I+ +++ + + + + LL M
Sbjct: 484 KGLCMSGMVDGGLRLFNDMLAKGDAKPDVISYNVLLDALIRTNDLPRAMDLLNQM 538
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 108/216 (50%), Gaps = 7/216 (3%)
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
AA+ + ++ ++G +PG +TY ++++ + A KV EM +G +S+++
Sbjct: 284 AAMNIMRRMENEGIVPGLMTYGAVVDGLVKCGRVEDAWKVAQEMGGQGLAPSEFVFSAVI 343
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ K+G + A+ + M A +PNV +Y++++D R+ + + EKL++EM K
Sbjct: 344 TGFCKSGEVDRALMVWETMVAARVKPNVVLYSAMIDGFARSGRMTEAEKLFEEMVDAKCI 403
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVK 560
P+ V+Y++++ Y + + E + G + AI+ I++ + ++++ +
Sbjct: 404 PNIVTYSSMVRGYFHIANSSRALSTWEEM-IKVGCVPTAISYSILISGLCDVGRLKDAMM 462
Query: 561 LLQDMKSEGTKLDERLYHSAMNAL-----RDAGLQM 591
+ ++M G D Y S M L D GL++
Sbjct: 463 VWKNMIGRGCAPDTIAYTSMMKGLCMSGMVDGGLRL 498
>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 543
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/497 (21%), Positives = 209/497 (42%), Gaps = 9/497 (1%)
Query: 91 LKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLP 150
+++ ++ ++A D+Y++ + F P LL + + K + + +SL + V P
Sbjct: 1 MRNVKSVDVALDFYHKMVTMKPF-PCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKP 59
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVY 209
+ T + ++ R ++L + G E +++ F + + G I
Sbjct: 60 NVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFV 119
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDSTPFSTHMYKILCD 267
+ +K G D I+ K+G S + +E ++ LD T +S + D
Sbjct: 120 DHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSA-----VVD 174
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L K G FEAL F M KGI + Y LI + K A L KG++
Sbjct: 175 GLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMP 234
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D + + +++ G++ + + M + ++ + +I+ A++V+
Sbjct: 235 DVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVF 294
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ +I +GC+P VTY S+I+ +C +KA EM G D VV +S+++ + K
Sbjct: 295 DLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKA 354
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G+ A L M G P++ ++D + + L++E+E+ D + Y
Sbjct: 355 GKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIY 414
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+ +++ + + + ++ ++ G ID IM+ K +++ LL M+
Sbjct: 415 SIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEE 474
Query: 568 EGTKLDERLYHSAMNAL 584
G DE Y+ + L
Sbjct: 475 NGCPPDECTYNVFVQGL 491
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 143/327 (43%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ + + L G +A++F +K+ G D ++I + A K+ E
Sbjct: 99 FTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKME 158
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E+ D +V ++G+V + LD+ M ++ + +++G +
Sbjct: 159 EQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWK 218
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A + ++ +G +P T+ I + + + S+A+ +F M G + VV Y+S++
Sbjct: 219 EAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSII 278
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ +++DAM + M KGC PN+ YNSL+ KN+ + EM +
Sbjct: 279 GAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLD 338
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD V+++T+I + +A + + + +G + D I++ K E + L
Sbjct: 339 PDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSL 398
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAG 588
++++ + LD +Y +N + +G
Sbjct: 399 FRELEKMNSDLDIIIYSIILNGMCSSG 425
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 111/295 (37%), Gaps = 35/295 (11%)
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
EG V + + V+ +K+ + AI+NG K AA+ +++ Q C
Sbjct: 109 EGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTA 168
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV-------------------- 441
Y+++++ C+ + +A +F +M KG + Y+ ++
Sbjct: 169 YSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMM 228
Query: 442 ---------------AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+ KTG I A + + M G E NV YNS++ H ++
Sbjct: 229 RKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMK 288
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+++ M R+ P+ V+Y ++I + + + + F E NG D ++
Sbjct: 289 DAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLI 348
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
G F K + +L M G D + ++ L +A L + E
Sbjct: 349 GGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELE 403
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 71/177 (40%), Gaps = 9/177 (5%)
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
CV ++ + + K A+ L+ M G +PNV +N +++ R + +
Sbjct: 25 CVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVL 84
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
M + V P V++TT+++ ++F + + G DR G ++ K+
Sbjct: 85 GLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKV 144
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL---------QMQAQWLQQNF 600
+ L+ M+ + LD Y + ++ L G+ QM + +Q N
Sbjct: 145 GHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNL 201
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/524 (20%), Positives = 229/524 (43%), Gaps = 10/524 (1%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQE---LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
+P+ ++ L G+ D ++QE L ++ P P+ + +I +
Sbjct: 159 IPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCP---PDVVSYTTVINGFFKEGDL 215
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSA 192
D + +LP+ T S ++A+ +A+ A +L + +G + +NS
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY I +KM S G+ D Y +M+ K G + +F R L
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
P T Y L G E M GI + +++ LIC++A +V
Sbjct: 336 --KPEIT-TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A +F + ++G+ D ++ + + G VE + E M + +L + + ++++
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
+ A ++ +++ +G + + SII+++C+ ++EK+F M + G
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
++ YS+++ Y G++ +A L+A M + G +P+ YN+L++ + + + L+
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+EME V+PD ++Y ++ + R + Y +G ++ + I++ K
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ +E +++ Q++ +L+ R ++ + AL G +A+ L
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 95/503 (18%), Positives = 197/503 (39%), Gaps = 78/503 (15%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P+ + ++S +HG Q +E A + + P+ T L+ YL ++ +
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKE-AIGFLKKMHS-DGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
+ + + P+ T TLLQ + T G AL+ + +
Sbjct: 324 RKMFDSMTKRGLKPEITT----------------YGTLLQGYATKG--ALVEMHGLL--- 362
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DS 254
+ M GI + + ++ AY K G ++ +F + + + L D+
Sbjct: 363 -------------DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDT 409
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+ T + ILC KSGR +A+++F M ++ + +Y SLI S + A+
Sbjct: 410 VTYGT-VIGILC----KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
EL E ++G +CL + +I++
Sbjct: 465 ELILEMLDRG------ICLDTIFFN-----------------------------SIIDSH 489
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K + K+++ ++ G P +TY+++I+ YC +A K+ M G
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDC 549
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V Y++++ Y K R+ DA+ L +M++ G P++ YN ++ + + ++L+
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+ + +Y ++ + D ++ + + ++ IM+G K+ +
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669
Query: 555 IEELVKLLQDMKSEGTKLDERLY 577
+E L + + G D R Y
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTY 692
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 163/414 (39%), Gaps = 23/414 (5%)
Query: 72 HHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSK 131
H PD ++S + + K+ + E + + K+ +PE +T L++
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR--GLKPEITTYGTLLQGYATKG 353
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL----L 187
+ L + + P+ + S L+ C A++ K+ +L VF + L +
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILI--CAYAKQGKVDQAML-VFSKMRQQGLNPDTV 410
Query: 188 AFNSAMG-----GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ + +G G + M Y ++ E++ IV Y ++ + +K
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV-----YNSLIHSLCIFDKWDKAKE 465
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L LE R + T + + DS K GR E+ K F M G+ D Y++LI
Sbjct: 466 LILEMLDRGI---CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ ++ A +L GM D L+ Y + +E L + M+++ +
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
I+ G + R AA ++Y + G TY I++ C+ L +A ++F
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ ++ M+ K GR +A L A + A G P+V Y SLM
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY-SLM 695
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 4/214 (1%)
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC---VVAYSSMVA 442
V ++ GCIP +Y ++ C +A ++ M G D C VV+Y++++
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGD-CPPDVVSYTTVIN 207
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ K G + A +M +G PNV Y+S++ +A+ + + ++ M + V P
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ +Y +++ Y + + + F + +G D ++ K + E K+
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M G K + Y + + G ++ L
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 23/276 (8%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIG---DSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+M GI LD+ + I++++ K G +SEK+ L + K D +ST L D
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI-GVKPDIITYST-----LID 522
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+G+ EA K M G+ D Y +LI + I+ ++ A LF+E E G+
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV-- 580
Query: 328 DPEVCLKLVLMYIEEGLVE-------KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
P++ + I +GL + K L V + +L++S I++G K
Sbjct: 581 SPDI---ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS--TYNIILHGLCKNNLT 635
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A+++++ L T+ +I A ++ +A+ +F + G V YS M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ G + + L M+ GC N + NS++
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 186/397 (46%), Gaps = 3/397 (0%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+ + + + G+ K + + ++E+M++ G + + +++ + G ++ +F
Sbjct: 104 VFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFE 163
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ K+ +P + L G++G E F++MK G + + + +LI S++
Sbjct: 164 DIKT--FQCSP-DIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYS 220
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
A ++K E G+ D ++ GL +++ V+ MK+ + K ++
Sbjct: 221 RCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNEL 280
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
C++++ ++ + + E++ S P V +++ + L + E+ F+E+
Sbjct: 281 TYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLEL 340
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+Q+GF + ++MV++YG+ + A ++ MK G P++ YNSLM M+ R+ N
Sbjct: 341 RQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANF 400
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ E++ +E+ + + PD +SY TVI AY R + +E R +G D
Sbjct: 401 ERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTF 460
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ ++ S E + ++ M G K ++ Y+S ++
Sbjct: 461 IASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVD 497
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 181/439 (41%), Gaps = 56/439 (12%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLK---DPQTQELAYDYYNEAKKLPEFRPEKSTLK 121
+EL + PD + + L G K D ++ + NE K P T
Sbjct: 89 LELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCK-----PNICTFN 143
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
LI+ K+ ++ + ED K + PD T NTLL VF +
Sbjct: 144 ALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTW----------------NTLLSVFGQN 187
Query: 182 G---EIALL--------------AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
G E++ + FN+ + Y++ + + VY++M AG+ D Y
Sbjct: 188 GMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSY 247
Query: 225 CQIMEAYYKIG---DSEKVAALFLE--CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
++ A + G SEKV A + CK +L H Y +G+ E +
Sbjct: 248 NAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSL-LHAYA--------NGKEIERM 298
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKL-AEELFKEAEEKGMLRDPEVCLKLVLM 338
+ GI+E ++ + S ++ + E F E ++G D +V +
Sbjct: 299 CALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSI 358
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
Y +V K ++++ MK S +++ +S+ + + ++ +++++G P
Sbjct: 359 YGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPD 418
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
++Y ++I AYCR A +V EM++ G ++ Y++ +A Y +A+ +V
Sbjct: 419 IISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVC 478
Query: 459 KMKAKGCEPNVWIYNSLMD 477
M GC+PN YNS++D
Sbjct: 479 YMIKHGCKPNQSTYNSIVD 497
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 104/201 (51%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+++ Q++ +G P TY ++++ + + A ++F EM+ +G + +++++
Sbjct: 88 ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIK 147
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
M+G G+ + M + +K C P++ +N+L+ + G+ +V ++KEM+R P
Sbjct: 148 MHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVP 207
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
++ ++ T+IS+Y+R FD + Y G D + ++ ++ ++ K+L
Sbjct: 208 ERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVL 267
Query: 563 QDMKSEGTKLDERLYHSAMNA 583
+MK K +E Y S ++A
Sbjct: 268 AEMKDGRCKPNELTYCSLLHA 288
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 138/307 (44%), Gaps = 4/307 (1%)
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--K 334
+AL+ M EKGI D Y +L+ F + K A ++F+E +G P +C
Sbjct: 87 DALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGC--KPNICTFNA 144
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
L+ M+ G + + V E +K + +++ F + V++++ G
Sbjct: 145 LIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAG 204
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
+P + T+ ++I++Y R + +A V+ M + G + + +Y++++A + G + +
Sbjct: 205 FVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSE 264
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
++A+MK C+PN Y SL+ + K + ++ L +E+ + P V T++
Sbjct: 265 KVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVN 324
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
++ + + E R G D MV ++ + + + ++L MK G
Sbjct: 325 SKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSL 384
Query: 575 RLYHSAM 581
Y+S M
Sbjct: 385 TTYNSLM 391
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/354 (18%), Positives = 146/354 (41%), Gaps = 16/354 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T L+ Q+ + + ++ K +P+ T + L++S R F A +
Sbjct: 172 PDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAV 231
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + G L ++N+ + + ++ + V +MK + YC ++ AY
Sbjct: 232 YKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYAN 291
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKIL-----CDSLGKSGRAFEALKFFRDMKEK 288
+ E++ AL E S ++ P + + ++ CD L ++ RAF +++++
Sbjct: 292 GKEIERMCALAEEIYSGIIE--PRAVLLKTLVLVNSKCDLLMETERAF------LELRQR 343
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G D + +++ + V A E+ + G L+ MY E++
Sbjct: 344 GFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERS 403
Query: 349 LDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+++ + ++ D IS ++ + + A +V ++ G P +TY + I
Sbjct: 404 EEILREILAKGIR-PDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIA 462
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+Y +++ +A V M + G Y+S+V Y K R +A V ++
Sbjct: 463 SYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLR 516
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 77/184 (41%), Gaps = 37/184 (20%)
Query: 448 GRIR--DAMWLVAKMKAKGCEPNVWIY--------------------------------- 472
GR+ DA+ L +M KG +P+V+ Y
Sbjct: 81 GRLSPPDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNIC 140
Query: 473 --NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
N+L+ MHG ++ K++++++ + +PD V++ T++S + + + E
Sbjct: 141 TFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEM 200
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
+ G V +R ++ +S+ ++ + + + M G D Y++ + AL GL
Sbjct: 201 KRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLW 260
Query: 591 MQAQ 594
Q++
Sbjct: 261 KQSE 264
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
HGR +E L +M + + PD +YTT++S + +A + V+ + E R G +
Sbjct: 80 HGRLSPPDALE-LKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPN 138
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
++ + + E++K+ +D+K+
Sbjct: 139 ICTFNALIKMHGNRGKFTEMMKVFEDIKT 167
>gi|224137224|ref|XP_002322504.1| predicted protein [Populus trichocarpa]
gi|222867134|gb|EEF04265.1| predicted protein [Populus trichocarpa]
Length = 647
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 160/351 (45%), Gaps = 8/351 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y M+ K D KV LF E R K D+ FST I C L A +A+++
Sbjct: 126 YNVTMKVLRKCRDLNKVEKLFDEMIERAVKPDNVTFSTI---ISCARL--CNLADKAVEW 180
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
F M G+ D ++++I S+ + V+ A L+ A + D L+ +Y +
Sbjct: 181 FEKMPSFGLDPDDVTFSTMIDSYGRVGNVEKALSLYDRARTEKWRLDTTTFSTLIRIYKD 240
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G + L+V E MK +K + I +++ + R W A K Y+ +I G P T
Sbjct: 241 SGNFDCCLNVYEEMKALGVKPNLVIYNTLLDAMGRARRPWQAKKFYQDIIDSGLSPSYAT 300
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
YA+++ AY R K++ EM++K V+ Y++++AM G + +A+ + MK
Sbjct: 301 YAALLRAYGRARYGEDTIKIYKEMKEKELSLNVLLYNTILAMCADLGFVDEAIEIFEDMK 360
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
G P+ W ++S++ M + + E + EM P+ T++I Y +A+ D
Sbjct: 361 NSGISPDSWTFSSMITMSSCCGKVSEAENMLNEMFEAGFQPNIFVLTSLIQCYGKAQRID 420
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
VK +N D G ++ V ++ EEL KL+ ++ KL
Sbjct: 421 DVVKTFNRLYELLITPDDRFCGCLLNVMTQTPN-EELGKLVDCVERANPKL 470
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 125/237 (52%), Gaps = 7/237 (2%)
Query: 345 VEKTLD--VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
VEK D + ++K + S ISCA + + + AV+ +E++ S G P VT+
Sbjct: 142 VEKLFDEMIERAVKPDNVTFSTIISCARLCNLADK-----AVEWFEKMPSFGLDPDDVTF 196
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+++I++Y R+ KA ++ + + + +S+++ +Y +G + + +MKA
Sbjct: 197 STMIDSYGRVGNVEKALSLYDRARTEKWRLDTTTFSTLIRIYKDSGNFDCCLNVYEEMKA 256
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
G +PN+ IYN+L+D GRA+ Q +K ++++ ++P +Y ++ AY RAR +
Sbjct: 257 LGVKPNLVIYNTLLDAMGRARRPWQAKKFYQDIIDSGLSPSYATYAALLRAYGRARYGED 316
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+K Y E + ++ + ++ + + L ++E +++ +DMK+ G D + S
Sbjct: 317 TIKIYKEMKEKELSLNVLLYNTILAMCADLGFVDEAIEIFEDMKNSGISPDSWTFSS 373
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 121/278 (43%), Gaps = 67/278 (24%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK--LDSTPFSTH------ 260
+EKM S G+ D + ++++Y ++G+ EK +L+ ++ K LD+T FST
Sbjct: 181 FEKMPSFGLDPDDVTFSTMIDSYGRVGNVEKALSLYDRARTEKWRLDTTTFSTLIRIYKD 240
Query: 261 ------------------------MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+Y L D++G++ R ++A KF++D+ + G+ +
Sbjct: 241 SGNFDCCLNVYEEMKALGVKPNLVIYNTLLDAMGRARRPWQAKKFYQDIIDSGLSPSYAT 300
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
YA+L+ ++ + +++KE +EK + + + ++ M + G V++ +++ E MK
Sbjct: 301 YAALLRAYGRARYGEDTIKIYKEMKEKELSLNVLLYNTILAMCADLGFVDEAIEIFEDMK 360
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
N+ G P T++S+I S
Sbjct: 361 NS-----------------------------------GISPDSWTFSSMITMSSCCGKVS 385
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
+AE + EM + GF + +S++ YGK RI D +
Sbjct: 386 EAENMLNEMFEAGFQPNIFVLTSLIQCYGKAQRIDDVV 423
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/305 (18%), Positives = 133/305 (43%)
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
K F +M E+ + D ++++I A E F++ G+ D ++ Y
Sbjct: 144 KLFDEMIERAVKPDNVTFSTIISCARLCNLADKAVEWFEKMPSFGLDPDDVTFSTMIDSY 203
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
G VEK L + + + K ++ ++ + + + VYE++ + G P
Sbjct: 204 GRVGNVEKALSLYDRARTEKWRLDTTTFSTLIRIYKDSGNFDCCLNVYEEMKALGVKPNL 263
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
V Y ++++A R +A+K + ++ G Y++++ YG+ D + + +
Sbjct: 264 VIYNTLLDAMGRARRPWQAKKFYQDIIDSGLSPSYATYAALLRAYGRARYGEDTIKIYKE 323
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
MK K NV +YN+++ M + + +++++M+ ++PD +++++I+ + +
Sbjct: 324 MKEKELSLNVLLYNTILAMCADLGFVDEAIEIFEDMKNSGISPDSWTFSSMITMSSCCGK 383
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
NE G + + ++ + K +I+++VK + D+R
Sbjct: 384 VSEAENMLNEMFEAGFQPNIFVLTSLIQCYGKAQRIDDVVKTFNRLYELLITPDDRFCGC 443
Query: 580 AMNAL 584
+N +
Sbjct: 444 LLNVM 448
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 61/120 (50%)
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
V +YN M + + ++L +VEKL+ EM R V PD V+++T+IS D V+++
Sbjct: 123 VVVYNVTMKVLRKCRDLNKVEKLFDEMIERAVKPDNVTFSTIISCARLCNLADKAVEWFE 182
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ G D M+ + ++ +E+ + L ++E +LD + + + +D+G
Sbjct: 183 KMPSFGLDPDDVTFSTMIDSYGRVGNVEKALSLYDRARTEKWRLDTTTFSTLIRIYKDSG 242
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 101/258 (39%), Gaps = 43/258 (16%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
E A Y+ A+ ++R + +T LIR S +D +++ E+ K V P+ +
Sbjct: 210 EKALSLYDRART-EKWRLDTTTFSTLIRIYKDSGNFDCCLNVYEEMKALGVKPNLVIYNT 268
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+ + RAR+ A Q I G + + + + Y + TI +Y++MK
Sbjct: 269 LLDAMGRARRPWQAKKFYQDIIDSGLSPSYATYAALLRAYGRARYGEDTIKIYKEMKEKE 328
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
+ L+ Y I+ +C L G
Sbjct: 329 LSLNVLLYNTIL-----------------------------------AMCADL---GFVD 350
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
EA++ F DMK GI D ++S+I + +V AE + E E G + V L+
Sbjct: 351 EAIEIFEDMKNSGISPDSWTFSSMITMSSCCGKVSEAENMLNEMFEAGFQPNIFVLTSLI 410
Query: 337 LMYIEEGLVEKTLDVVES 354
Y G ++ DVV++
Sbjct: 411 QCY---GKAQRIDDVVKT 425
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 78/172 (45%), Gaps = 2/172 (1%)
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
F++ VV Y+ + + K + L +M + +P+ +++++ R NL
Sbjct: 119 FNREVVVYNVTMKVLRKCRDLNKVEKLFDEMIERAVKPDNVTFSTIISC-ARLCNLADKA 177
Query: 490 KLWKE-MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
W E M + PD V+++T+I +Y R + + Y+ R +D ++ +
Sbjct: 178 VEWFEKMPSFGLDPDDVTFSTMIDSYGRVGNVEKALSLYDRARTEKWRLDTTTFSTLIRI 237
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ + + + ++MK+ G K + +Y++ ++A+ A QA+ Q+
Sbjct: 238 YKDSGNFDCCLNVYEEMKALGVKPNLVIYNTLLDAMGRARRPWQAKKFYQDI 289
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 180/410 (43%), Gaps = 18/410 (4%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+ F +G K++ Y++ I ++ +M+ GI + ++ + ++G + ++F
Sbjct: 60 IFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFA 119
Query: 246 ECKSRKLDSTPFS-THMYKILC---------DSLGKSGRAFEALKFFRDMKEKGILEDPS 295
+ D + T + K LC + L K G+A AL+ R + K + +
Sbjct: 120 NILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVV 179
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
+Y ++I S + V A +L+ E +G+ D L+ + G ++ +D+ M
Sbjct: 180 MYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKM 239
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+K +V+GF K V+ ++ QG P VTY S+++ YC +
Sbjct: 240 ILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQV 299
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+KA +F M Q G + +Y+ M+ + K ++ +AM L KM K PNV Y SL
Sbjct: 300 NKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSL 359
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV--------KFY 527
+D ++ + KL EM R V PD ++Y++++ A + + D + + +
Sbjct: 360 IDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVF 419
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ + G +D +M+ F E + LL M+ G D + Y
Sbjct: 420 EDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTY 469
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 158/336 (47%), Gaps = 23/336 (6%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
+ TP KIL SL K A+ R M+ KGI + LI F+ + + L
Sbjct: 55 NPTPPIFEFGKIL-GSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPL 113
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
+ +F +KG DP V + L + +GL LK+S ++N
Sbjct: 114 SFSVFANILKKG--YDPNV---ITLTTLIKGLC--------------LKVS---YGTLIN 151
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G K AA+++ ++ + P V Y +II++ C++ L ++A ++ EM +G
Sbjct: 152 GLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISP 211
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
VV YS++++ + G+++DA+ L KM + +P+V+ +N L+D + +++ + ++
Sbjct: 212 DVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVF 271
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
M ++ + P+ V+Y +++ Y ++ + +N G D IM+ F K+
Sbjct: 272 AMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKI 331
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+++E + L + M + + Y S ++ L +G
Sbjct: 332 KKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSG 367
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 153/330 (46%), Gaps = 14/330 (4%)
Query: 180 TDGEIA---LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
DG++ ++ +N+ + K+ + +Y +M S GI D Y ++ ++ +G
Sbjct: 169 VDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGK 228
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+ LF L++ + + IL D K G+ E F M ++GI +
Sbjct: 229 LKDAIDLF---NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVT 285
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y SL+ + + +V A +F + G+ D + ++ + + V++ +++ + M
Sbjct: 286 YCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMH 345
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR----- 411
+ + ++++G K A+K+ +++ +G P +TY+SI++A C+
Sbjct: 346 CKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVD 405
Query: 412 --IALYSK-AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
IAL +K ++VF ++ KG++ V AY+ M+ + G +A+ L++KM+ G P+
Sbjct: 406 KAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPD 465
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
Y ++ + EKL +EM R
Sbjct: 466 AKTYEIIILSLFKKDENDMAEKLLREMIAR 495
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 114/298 (38%), Gaps = 37/298 (12%)
Query: 139 LSEDFKIYN------VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNS 191
++E F +Y+ + PD T S L++ K K A L I + + + FN
Sbjct: 194 VNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNI 253
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ G+ K V+ M GI + YC +M+ Y + K ++F
Sbjct: 254 LVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGG 313
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
++ T Y I+ + K + EA+ F+ M K I+ + Y SLI ++
Sbjct: 314 VNP---DTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKIS 370
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A +L E ++G+ D ++ + V+K + ++ +K+
Sbjct: 371 YALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKD-------------- 416
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+V+E L +G Y +I +C L+++A + +M+ G
Sbjct: 417 -------------QVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNG 461
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 79/218 (36%), Gaps = 39/218 (17%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
P+ + ++I + KK D ++L + N++P+ T + L+ ++ K A
Sbjct: 315 NPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALK 374
Query: 174 LLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ ++M G+ D Y I++A K
Sbjct: 375 LV----------------------------------DEMHDRGVPPDIITYSSILDALCK 400
Query: 234 IGDSEKVAALFLECKSRKLDST-----PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
+K AL + K + + + Y ++ G EAL M++
Sbjct: 401 NHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDN 460
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
G + D Y +I S E +AE+L +E +G+L
Sbjct: 461 GRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLL 498
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 171/354 (48%), Gaps = 6/354 (1%)
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
++G E +F S +T F+ + L + GKSG EA+K F MK G+
Sbjct: 199 RLGKVELAKGVFETALSEGYGNTVFA---FSALISAYGKSGYFDEAIKVFESMKVSGLKP 255
Query: 293 DPSIYASLI--CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
+ Y ++I C + E K E+F+E G+ D L+ + GL E +
Sbjct: 256 NLVTYNAVIDACGKGGV-EFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARN 314
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ M + + +++ K A ++ ++ + +P VTY+++ + Y
Sbjct: 315 LFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYA 374
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ A ++ EM+ G V+Y++++++Y K GR DA+ + +M + G + +V
Sbjct: 375 KAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVV 434
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YN+L+D +G+ +V +++KEM++ +V P+ ++Y+T+I Y++ ++ ++ + EF
Sbjct: 435 TYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF 494
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ G D + ++ K ++ V LL +M EG + + Y+S ++A
Sbjct: 495 KQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAF 548
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 155/319 (48%), Gaps = 5/319 (1%)
Query: 186 LLAFNSAMGGYNKLHMYYSTIL-VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
L+ +N+ + K + + ++ ++E+M G+ D Y ++ + G E LF
Sbjct: 257 LVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLF 316
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E R +D F+ Y L D++ K G+ A + +M K IL + Y+++ +
Sbjct: 317 NEMIDRGIDQDVFT---YNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGY 373
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
A ++ A L+ E + G+ D L+ +Y + G E L V + M ++ +K
Sbjct: 374 AKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDV 433
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
A+++G+ K+ + +V++++ P +TY+++I+ Y + +LY +A +VF E
Sbjct: 434 VTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFRE 493
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+Q G VV YS ++ K G + A+ L+ +M +G PNV YNS++D GR+
Sbjct: 494 FKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTT 553
Query: 485 LR-QVEKLWKEMERRKVTP 502
V+ + ER+ +P
Sbjct: 554 AEFLVDGVGASNERQSESP 572
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 169/366 (46%), Gaps = 38/366 (10%)
Query: 262 YKILCDSLGKSGRAFEALKFFRD--MKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
Y L LG G ++A++ F ++E E + +++I + + +V+LA+ +F+
Sbjct: 153 YTFLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFET 212
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR- 378
A +G L+ Y + G ++ + V ESMK + LK + A+++ K
Sbjct: 213 ALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGV 272
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ V+++E+++ G P ++TY S++ R L+ A +F EM +G D+ V Y+
Sbjct: 273 EFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYN 332
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ K G++ A ++ +M K PNV Y+++ D + +A L L+ EM+
Sbjct: 333 TLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFL 392
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG---GVI------------------ 537
+ D+VSY T++S Y + F+ +K E +G V+
Sbjct: 393 GIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEV 452
Query: 538 ---------DRAIAGI-----MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
DR + ++ V+SK S EE +++ ++ K G K D LY +NA
Sbjct: 453 TRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINA 512
Query: 584 LRDAGL 589
L GL
Sbjct: 513 LCKNGL 518
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 194/482 (40%), Gaps = 77/482 (15%)
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGG 195
+V + E+ V PD T + L+A C R ++ A L
Sbjct: 277 VVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNL--------------------- 315
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ +M GI D Y +++A K G + + LE +K+
Sbjct: 316 -------------FNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPN 362
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y + D K+GR +AL + +MK GI D Y +L+ +A + + A +
Sbjct: 363 VVT---YSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALK 419
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ KE G+ +D L+ Y ++G + V + MK ++ + +++ +S
Sbjct: 420 VCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYS 479
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K Y A++V+ + G V Y+ +INA C+ L A + EM ++G VV
Sbjct: 480 KGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVV 539
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKA--------------KGCEPNV--W-------IY 472
Y+S++ + GR A +LV + A +G + + W Y
Sbjct: 540 TYNSIIDAF---GRSTTAEFLVDGVGASNERQSESPSFMLIEGVDESEINWDDGHVFKFY 596
Query: 473 NSLM-DMHGRAK-------NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
L+ + G AK +R + ++K+M ++ P+ V+++ +++A +R + +
Sbjct: 597 QQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDAS 656
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
E R+ D + G+ G+ S E + Q + E ++D + NAL
Sbjct: 657 MLLEELRL----FDNQVYGVAHGLLMGFS--ENVWIQAQYLFDEVKQMDSSTASAFYNAL 710
Query: 585 RD 586
D
Sbjct: 711 TD 712
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 178/384 (46%), Gaps = 9/384 (2%)
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGD---SEKVAALFLECKSRKLDSTPFSTHMYK 263
+V + M+ AG + Y ++ A+ + G+ +E++ + E R S +
Sbjct: 176 VVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRP------SLVTFN 229
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
+ + L K+GR +A K F +M +G+ D Y +L+ + + A +F E +K
Sbjct: 230 TVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQK 289
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G++ D L+ G +E+ + +V M+ L++++ A+++GF + A
Sbjct: 290 GVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDA 349
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+ +++ P V Y +IN YC++ +A ++ EM+ KG VV YS++++
Sbjct: 350 LLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSG 409
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
Y K G A L KM KG P+ Y+SL+ + L +L+++M + + PD
Sbjct: 410 YCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPD 469
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+ +YTT+I + + + ++E G + D +++ SK ++ +E +LL
Sbjct: 470 EFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLF 529
Query: 564 DMKSEGTKLDERLYHSAMNALRDA 587
+ E D Y + M+ R A
Sbjct: 530 KLYYEDPVPDNIKYEALMHCCRTA 553
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 153/333 (45%), Gaps = 3/333 (0%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFF-RDMKEKGILEDPSIYASLICSFASITEVK 311
D + + Y IL +L G+ EAL DM+ G + Y +L+ +F EV
Sbjct: 148 DGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVD 207
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYI-EEGLVEKTLDVVESMKNAKLKISDCISCAI 370
AE L E G +R V V+ + + G +E + + M L +
Sbjct: 208 AAERLVGVMREGG-VRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTL 266
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
V+G+ K A+ V+ ++ +G +P VT+ S+I+A CR +A + +M+++G
Sbjct: 267 VSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGL 326
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+++++ + + G + DA+ + +M+ +P+V YN L++ + + + + +
Sbjct: 327 RMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARE 386
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L EME + + PD V+Y+T++S Y + + D + + G V D ++
Sbjct: 387 LIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLC 446
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ ++ + +L + M G + DE Y + ++
Sbjct: 447 EERRLGDACELFEKMLQLGLQPDEFTYTTLIDG 479
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 174/421 (41%), Gaps = 40/421 (9%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T L+ ++ + D+ L + V P T + +V +A + + A +
Sbjct: 188 PNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKM 247
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+G +++N+ + GY K + + V+ +M G+V D + ++ A +
Sbjct: 248 FDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCR 307
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G+ E+ AL + + R L F+ + L D ++G +AL ++M+E I
Sbjct: 308 AGNLERAVALVGQMRERGLRMNEFT---FTALIDGFCRNGFLDDALLAMKEMRECRIQPS 364
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y LI + + + A EL E E KGM D V+ Y
Sbjct: 365 VVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPD-------VVTY-------------- 403
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
I++G+ K +A ++ +++ +G +P +TY+S+I C
Sbjct: 404 --------------STILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEER 449
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
A ++F +M Q G Y++++ + K G ++ A+ L +M KG P+V Y+
Sbjct: 450 RLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYS 509
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
L+D ++ ++ ++L ++ PD + Y ++ R EF V F M
Sbjct: 510 VLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCC-RTAEFKSVVALLKGFSMK 568
Query: 534 G 534
G
Sbjct: 569 G 569
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 177/411 (43%), Gaps = 29/411 (7%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P F++ ++G+ K + ++ A ++E + P+ + L+ ++ +
Sbjct: 223 PSLVTFNTVVNGLCKAGRMED-ARKMFDEMAR-EGLTPDGVSYNTLVSGYCKAGCLHEAL 280
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
++ + V+PD T + L+ + RA + A L+ G + F + + G+
Sbjct: 281 AVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGF 340
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDS 254
+ +L ++M+ I CY ++ Y K+G ++ L +E K K D
Sbjct: 341 CRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDV 400
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+ST + C +G + AFE R M +KG++ D Y+SLI + A
Sbjct: 401 VTYST-ILSGYC-KIGDTDSAFE---LNRKMLKKGVVPDAITYSSLIRGLCEERRLGDAC 455
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNG 373
ELF++ + G+ D L+ + +EG V+K L + + M K + D ++ ++ ++G
Sbjct: 456 ELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIK-KGVLPDVVTYSVLIDG 514
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA----------------LYSK 417
SK A ++ +L + +P + Y ++++ CR A L ++
Sbjct: 515 LSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHC-CRTAEFKSVVALLKGFSMKGLMNQ 573
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
A+KV+ M + + YS ++ + + G I A+ ++ G PN
Sbjct: 574 ADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPN 624
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 2/166 (1%)
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD-MHGRAKNLRQ 487
G+ ++AY++ V + + A L+A M G PNV+ YN L+ + R +
Sbjct: 115 GYAPSLLAYNA-VLLALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+ + +M P+ V+Y T+++A+ RA E D + R G +V
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
K ++E+ K+ +M EG D Y++ ++ AG +A
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEA 279
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 144/375 (38%), Gaps = 33/375 (8%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQE---LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
+ VPD F S +H M + + L ++ EF T LI +
Sbjct: 288 QKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEF-----TFTALIDGFCR 342
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLA 188
+ D + ++ + + P + L+ + + A L+ G + ++
Sbjct: 343 NGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVT 402
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY---YKIGDSEKVAALFL 245
+++ + GY K+ S + KM G+V D+ Y ++ ++GD+ LF
Sbjct: 403 YSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDA---CELFE 459
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ L F+ Y L D K G +AL +M +KG+L D Y+ LI +
Sbjct: 460 KMLQLGLQPDEFT---YTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLS 516
Query: 306 SITEVKLAEEL-FKEAEEKGM------------LRDPEV--CLKLVLMYIEEGLVEKTLD 350
K A+ L FK E + R E + L+ + +GL+ +
Sbjct: 517 KSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADK 576
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
V +SM + K+ + +++G + A+ ++QL+ G P + S++
Sbjct: 577 VYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLF 636
Query: 411 RIALYSKAEKVFIEM 425
+ +A+ V E+
Sbjct: 637 EEGMTVEADNVIQEL 651
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 118/527 (22%), Positives = 227/527 (43%), Gaps = 51/527 (9%)
Query: 39 PFVTVNPSSIINHRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQ- 97
PFV + P S ++H F ++ A+ + +E NR S + +A + L ++ P
Sbjct: 31 PFV-LYPDSSVSHHFSKLKATRSRKRLE-NRVS--AVSKSEASGLNGRLQQIVSTPNGDL 86
Query: 98 -----ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDA 152
E + N ++ EF + +R LV++ + + + E +PD
Sbjct: 87 NVIGMESSPIGVNGSRSFEEFAS-----NIHLRKLVRNGELEEGLKFLERMIYQGDIPDV 141
Query: 153 HTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEK 211
C+ L+ R+ K K A ++++ G + ++ +N +GGY K + V E+
Sbjct: 142 IACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLER 201
Query: 212 MKSAGIVL----------DSG----------------CYCQIMEAYYKI----GDSEKVA 241
M A V+ DSG CY ++ I DS
Sbjct: 202 MSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQ 261
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
A+ L + RK P Y +L + + K GR EA+KF +M G + + ++
Sbjct: 262 AMKLLDEMRKKGCKP-DVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIIL 320
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAK 359
S S AE L + KG P V +L+ + L+ + +DV+E M
Sbjct: 321 RSMCSTGRWMDAERLLSDMLRKGC--SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 378
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+ +++GF + + A++ E ++S+GC P VTY +++ A C+ A
Sbjct: 379 CVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAV 438
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
++ ++ KG ++ Y++++ K G+ A+ L+ +M+ KG +P++ Y++L+
Sbjct: 439 EILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGL 498
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
GR + + K++ +ME + P V+Y ++ +A++ + F
Sbjct: 499 GREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDF 545
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 155/372 (41%), Gaps = 37/372 (9%)
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
SR + + H+ K++ ++G E LKF M +G + D SLI F
Sbjct: 101 SRSFEEFASNIHLRKLV-----RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSG 155
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK------------ 356
+ K A + + E G + D L+ Y + G ++K L+V+E M
Sbjct: 156 KTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTIL 215
Query: 357 -----NAKLK--------------ISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCI 396
+ KLK D I+ I + G A+K+ +++ +GC
Sbjct: 216 RSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCK 275
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P VTY +IN C+ +A K M G V+ ++ ++ TGR DA L
Sbjct: 276 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERL 335
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
++ M KGC P+V +N L++ R + L + + ++M + P+ +SY ++ + +
Sbjct: 336 LSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQ 395
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++ D +++ G D ++ K +++ V++L + S+G
Sbjct: 396 EKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLIT 455
Query: 577 YHSAMNALRDAG 588
Y++ ++ L G
Sbjct: 456 YNTVIDGLTKVG 467
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 3/214 (1%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
+K E++I QG IP + S+I +CR KA ++ ++ G V+ Y+ ++
Sbjct: 125 GLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIG 184
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
Y K+G I A+ ++ +M P+V YN+++ + L++ ++ +R+ P
Sbjct: 185 GYCKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYP 241
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D ++YT +I A +K +E R G D +++ K +++E +K L
Sbjct: 242 DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFL 301
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+M S G K + ++ + ++ G M A+ L
Sbjct: 302 NNMPSYGCKPNVITHNIILRSMCSTGRWMDAERL 335
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 120/296 (40%), Gaps = 4/296 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P+ T +LI + + + D + + Y P+ T + ++ S ++ A
Sbjct: 275 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAER 334
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
LL + G +++ FN + + + I V EKM G V +S Y ++ +
Sbjct: 335 LLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFC 394
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+ ++ A +LE + T Y L +L K G+ A++ + KG
Sbjct: 395 QEKKMDR-AIEYLEIMVSRGCYPDIVT--YNTLLTALCKDGKVDAAVEILNQLSSKGCSP 451
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
Y ++I + + + A EL +E KG+ D L+ EG V++ + +
Sbjct: 452 VLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIF 511
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
M+ +K S AI+ G K + A+ ++ +GC P + TY +I
Sbjct: 512 HDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 171/354 (48%), Gaps = 6/354 (1%)
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
++G E +F S +T F+ + L + GKSG EA+K F MK G+
Sbjct: 199 RLGKVELAKGVFETALSEGYGNTVFA---FSALISAYGKSGYFDEAIKVFESMKVSGLKP 255
Query: 293 DPSIYASLI--CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
+ Y ++I C + E K E+F+E G+ D L+ + GL E +
Sbjct: 256 NLVTYNAVIDACGKGGV-EFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARN 314
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ M + + +++ K A ++ ++ + +P VTY+++ + Y
Sbjct: 315 LFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYA 374
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ A ++ EM+ G V+Y++++++Y K GR DA+ + +M + G + +V
Sbjct: 375 KAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVV 434
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YN+L+D +G+ +V +++KEM++ +V P+ ++Y+T+I Y++ ++ ++ + EF
Sbjct: 435 TYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF 494
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ G D + ++ K ++ V LL +M EG + + Y+S ++A
Sbjct: 495 KQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAF 548
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 155/319 (48%), Gaps = 5/319 (1%)
Query: 186 LLAFNSAMGGYNKLHMYYSTIL-VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
L+ +N+ + K + + ++ ++E+M G+ D Y ++ + G E LF
Sbjct: 257 LVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLF 316
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E R +D F+ Y L D++ K G+ A + +M K IL + Y+++ +
Sbjct: 317 NEMIDRGIDQDVFT---YNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGY 373
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
A ++ A L+ E + G+ D L+ +Y + G E L V + M ++ +K
Sbjct: 374 AKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDV 433
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
A+++G+ K+ + +V++++ P +TY+++I+ Y + +LY +A +VF E
Sbjct: 434 VTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFRE 493
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+Q G VV YS ++ K G + A+ L+ +M +G PNV YNS++D GR+
Sbjct: 494 FKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTT 553
Query: 485 LR-QVEKLWKEMERRKVTP 502
V+ + ER+ +P
Sbjct: 554 AEFLVDGVGASNERQSESP 572
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 169/366 (46%), Gaps = 38/366 (10%)
Query: 262 YKILCDSLGKSGRAFEALKFFRD--MKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
Y L LG G ++A++ F ++E E + +++I + + +V+LA+ +F+
Sbjct: 153 YTFLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFET 212
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR- 378
A +G L+ Y + G ++ + V ESMK + LK + A+++ K
Sbjct: 213 ALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGV 272
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ V+++E+++ G P ++TY S++ R L+ A +F EM +G D+ V Y+
Sbjct: 273 EFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYN 332
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ K G++ A ++ +M K PNV Y+++ D + +A L L+ EM+
Sbjct: 333 TLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFL 392
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG---GVI------------------ 537
+ D+VSY T++S Y + F+ +K E +G V+
Sbjct: 393 GIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEV 452
Query: 538 ---------DRAIAGI-----MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
DR + ++ V+SK S EE +++ ++ K G K D LY +NA
Sbjct: 453 TRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINA 512
Query: 584 LRDAGL 589
L GL
Sbjct: 513 LCKNGL 518
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 99/479 (20%), Positives = 190/479 (39%), Gaps = 71/479 (14%)
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGG 195
+V + E+ V PD T + L+A C R ++ A L
Sbjct: 277 VVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNL--------------------- 315
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ +M GI D Y +++A K G + + LE +K+
Sbjct: 316 -------------FNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPN 362
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y + D K+GR +AL + +MK GI D Y +L+ +A + + A +
Sbjct: 363 VVT---YSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALK 419
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ KE G+ +D L+ Y ++G + V + MK ++ + +++ +S
Sbjct: 420 VCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYS 479
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K Y A++V+ + G V Y+ +INA C+ L A + EM ++G VV
Sbjct: 480 KGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVV 539
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI--------------------YNSL 475
Y+S++ +G++ + V + E ++ Y L
Sbjct: 540 TYNSIIDAFGRSTTAEFLVDGVGASNERQSESPTFMLIEGVDESEINWDDGHVFKFYQQL 599
Query: 476 M-DMHGRAK-------NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
+ + G AK +R + ++K+M ++ P+ V+++ +++A +R + +
Sbjct: 600 VSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLL 659
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
E R+ D + G+ G+ S E + Q + E ++D + NAL D
Sbjct: 660 EELRL----FDNQVYGVAHGLLMGFS--ENVWIQAQYLFDEVKQMDSSTASAFYNALTD 712
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 184/400 (46%), Gaps = 6/400 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +L+ L S + + L +D + +T L+ + + A+ L
Sbjct: 235 PNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRL 294
Query: 175 LQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ ++ G + ++ +N+ M G K + + M + ++ D Y ++ Y +
Sbjct: 295 GEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTR 354
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G+ + LF E + R L + + Y L D L + G A++ +M + G D
Sbjct: 355 LGNIGEAFLLFAELRYRSLAPSVVT---YNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPD 411
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ + + F + + +A+ELF E +G+ D + ++ ++ G K + E
Sbjct: 412 VFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQE 471
Query: 354 SMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
M A+ D I+ + ++G K A ++ ++++ G +P VTY SII+A+
Sbjct: 472 EML-ARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMA 530
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
KA +F+EM KG VV Y+ ++ Y GR++ A+ +M KG PNV Y
Sbjct: 531 GHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 590
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
N+L++ + + + Q + EM+ + ++P+K +YT +I+
Sbjct: 591 NALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILIN 630
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 169/395 (42%), Gaps = 10/395 (2%)
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYY----KIGDSEKVAALFLECKSRKLDSTPFSTHM 261
+LV+ KM S G++ D +++ I + +V + +EC T
Sbjct: 151 LLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVT------ 204
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y + DS K G EAL+ M+ G + Y L+ + E++ A+EL ++
Sbjct: 205 YNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDML 264
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
G+ L+ Y E+G +E+ + E M + + I+ G K
Sbjct: 265 RLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVS 324
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A K+ + ++++ +P V+Y ++I Y R+ +A +F E++ + VV Y++++
Sbjct: 325 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLI 384
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ G + AM L +M G +P+V+ + + + + NL ++L+ EM R +
Sbjct: 385 DGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQ 444
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD+ +Y T I + + E G D + + KL ++E +L
Sbjct: 445 PDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASEL 504
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ M G D Y S ++A AG +A+ L
Sbjct: 505 VKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAL 539
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 208/498 (41%), Gaps = 55/498 (11%)
Query: 110 LPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFK 169
LP+ + L+LL + D+ + ++ + +YNV+ + C +V
Sbjct: 163 LPDVKNCNRVLRLL-------RDRDNNIDVARE--VYNVMVECGICPTVVTY-------- 205
Query: 170 IANTLLQVFITDG----EIALLAFNSAMG------GYNKL--------HMYYSTILVYEK 211
NT+L F G + LL AMG YN L M + L+ +
Sbjct: 206 --NTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELI-QD 262
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST--PFSTHMYKILCDSL 269
M G+ + Y ++ Y + G E+ + L E SR T ++T MY L
Sbjct: 263 MLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMY-----GL 317
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
K GR +A K M K ++ D Y +LI + + + A LF E + + P
Sbjct: 318 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSL--AP 375
Query: 330 EVCLKLVLMYIEEGLVE-KTLDVVESMKNAKLKIS---DCIS-CAIVNGFSKRRGYWAAV 384
V L+ +GL LDV +K+ +K D + V GF K A
Sbjct: 376 SVVTYNTLI---DGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAK 432
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+++++++++G P + Y + I ++ SKA + EM +GF ++ Y+ +
Sbjct: 433 ELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL 492
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K G +++A LV KM G P+ Y S++ H A +LR+ L+ EM + + P
Sbjct: 493 HKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSV 552
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
V+YT +I +Y + + + E G + ++ K+ ++++ +
Sbjct: 553 VTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAE 612
Query: 565 MKSEGTKLDERLYHSAMN 582
M+++G ++ Y +N
Sbjct: 613 MQAKGISPNKYTYTILIN 630
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 163/425 (38%), Gaps = 53/425 (12%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
+ AVP +++ ++G+ K + ++A+KL + K+ + L+ Y +
Sbjct: 301 RGAVPTVVTYNTIMYGLCK--------WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGY 352
Query: 134 DSIVSLSEDFKIYNVL------PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIAL 186
+ ++ E F ++ L P T + L+ R +A L I G + +
Sbjct: 353 TRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDV 412
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
F + + G+ K+ ++++M + G+ D Y + K+GD K + E
Sbjct: 413 FTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEE 472
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+R P Y + D L K G EA + + M G++ D Y S+I +
Sbjct: 473 MLARGF---PPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLM 529
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
++ A LF E KG+ P V VL
Sbjct: 530 AGHLRKARALFLEMLSKGIF--PSVVTYTVL----------------------------- 558
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
++ ++ R A+ + ++ +G P +TY ++IN C++ +A F EMQ
Sbjct: 559 ----IHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQ 614
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
KG Y+ ++ G ++A+ L M + +P+ + SL+ + L
Sbjct: 615 AKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLH 674
Query: 487 QVEKL 491
V L
Sbjct: 675 VVRHL 679
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 169/370 (45%), Gaps = 7/370 (1%)
Query: 199 LHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFS 258
L M + KMK + + ++ + K+G ++ V F + T F+
Sbjct: 76 LGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFT 135
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
Y I+ D + K G A F +MK +G++ D Y S+I + + +L + ++
Sbjct: 136 ---YNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVG--RLDDTVYF 190
Query: 319 EAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E K M +P+V L+ + + G + K L+ MK + LK + +V+ F K
Sbjct: 191 FEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCK 250
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A+K Y + G +P + TY S+++A C+I S A ++ EM + G + VV
Sbjct: 251 EDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVT 310
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++++ R+++A L KM G PN+ YN+L+ +AKN+ + +L E++
Sbjct: 311 YTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 370
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
R + PD + Y T I + + NE + NG + I ++ + K
Sbjct: 371 GRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPT 430
Query: 557 ELVKLLQDMK 566
E + LL++M+
Sbjct: 431 EGLHLLEEMQ 440
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 153/324 (47%)
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L K G+ +FF+DM G Y +I +++ A LF+E + +G
Sbjct: 104 LLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRG 163
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
++ D ++ Y + G ++ T+ E MK+ + +++N F K +
Sbjct: 164 LIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGL 223
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+ Y ++ G P V+Y+++++A+C+ + +A K +++M++ G Y+S+V
Sbjct: 224 EFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDAN 283
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K G + DA L +M G E NV Y +L+D A+ +++ EKL+ +M V P+
Sbjct: 284 CKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNL 343
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
SY +I + +A+ D ++ NE + G D + G + L +IE ++ +
Sbjct: 344 ASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNE 403
Query: 565 MKSEGTKLDERLYHSAMNALRDAG 588
M+ G K + +Y + M+A +G
Sbjct: 404 MQENGIKANTLIYTTLMDAYFKSG 427
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 145/310 (46%), Gaps = 18/310 (5%)
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK-------LVLMYIEEGLVEK 347
SI ++ S A + E + +EL+ VC+ L + I+ G++E+
Sbjct: 31 SILREIVLSKAELEECDVFDELWSTRN---------VCVPGFGVFDALFSVLIDLGMLEE 81
Query: 348 TLDVVESMKNAKLKISDCISC-AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
MK ++ SC +++ F+K + ++ +I G P TY +I
Sbjct: 82 ATQCFSKMKRFRV-FPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMI 140
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
+ + A +F EM+ +G V Y+SM+ YGK GR+ D ++ +MK+ CE
Sbjct: 141 DCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCE 200
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+V YNSL++ ++ L + + ++EM++ + P+ VSY+T++ A+ + +KF
Sbjct: 201 PDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKF 260
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
Y + R G V + +V K+ + + +L +M G + + Y + ++ L D
Sbjct: 261 YVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCD 320
Query: 587 AGLQMQAQWL 596
A +A+ L
Sbjct: 321 AERMKEAEKL 330
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 176/391 (45%), Gaps = 4/391 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++E+MK G++ D+ Y +++ Y K+G + F E KS + + Y L +
Sbjct: 155 LFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVIT---YNSLIN 211
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
KSG+ + L+F+R+MK+ G+ + Y++L+ +F ++ A + + + G +
Sbjct: 212 CFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVP 271
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ LV + G + + M ++ + A+++G A K++
Sbjct: 272 NEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLF 331
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
++++ G IP +Y ++I+ + + +A ++ E++ +G ++ Y + +
Sbjct: 332 GKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGL 391
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
+I A ++ +M+ G + N IY +LMD + ++ N + L +EM+ V++
Sbjct: 392 EKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTF 451
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGV-IDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+I + + + ++ + G+ + A+ M+ K +Q++ L + M
Sbjct: 452 CVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMA 511
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWLQ 597
EG D Y S M+ G ++A L+
Sbjct: 512 QEGLVPDRTAYTSLMDGNLKQGNMLEALALR 542
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 119/518 (22%), Positives = 208/518 (40%), Gaps = 33/518 (6%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VP FD+ L +L D E A +++ K+ F P+ + L+ + K D +
Sbjct: 60 VPGFGVFDA-LFSVLIDLGMLEEATQCFSKMKRFRVF-PKTRSCNGLLHKFAKLGKTDGV 117
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
+D P T + ++ + + A L + G I + +NS + G
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDG 177
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
Y K+ T+ +E+MKS D Y ++ + K G K + E K L
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPN 237
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
S Y L D+ K +A+KF+ DM+ G + + Y SL+ + I + A
Sbjct: 238 VVS---YSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFR 294
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC------- 368
L E E G+ + V+ Y L++ D E MK A+ ++
Sbjct: 295 LANEMLEVGVEWN-------VVTYT--ALIDGLCDA-ERMKEAEKLFGKMVTAGVIPNLA 344
Query: 369 ---AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
A+++GF K + A+++ +L +G P + Y + I C + A+ V EM
Sbjct: 345 SYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEM 404
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN- 484
Q+ G + Y++++ Y K+G + + L+ +M+ E V + L+D G KN
Sbjct: 405 QENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLID--GLCKNK 462
Query: 485 --LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR-AI 541
+ ++ + + P+ YT +I + + + + G V DR A
Sbjct: 463 LVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAY 522
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+M G + + +E L L M G KLD Y S
Sbjct: 523 TSLMDGNLKQGNMLEALA-LRDKMAEIGMKLDLLAYTS 559
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 192/466 (41%), Gaps = 21/466 (4%)
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
E K P+ T +I + + D V E+ K + PD T + L+ ++
Sbjct: 157 EEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKS 216
Query: 166 RKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
K + G + ++++++ + + K M I Y M+ G V + Y
Sbjct: 217 GKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTY 276
Query: 225 CQIMEAYYKIG---DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
+++A KIG D+ ++A LE ++ Y L D L + R EA K
Sbjct: 277 TSLVDANCKIGNLSDAFRLANEMLEV------GVEWNVVTYTALIDGLCDAERMKEAEKL 330
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
F M G++ + + Y +LI F + A EL E + +G+ P++ L ++
Sbjct: 331 FGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI--QPDLLLYGTFIWGL 388
Query: 342 EGL--VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
GL +E V+ M+ +K + I +++ + K + + E++
Sbjct: 389 CGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTV 448
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQK-GFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
VT+ +I+ C+ L SKA F M G Y++M+ K +++ A L
Sbjct: 449 VTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFE 508
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M +G P+ Y SLMD + + N+ + L +M + D ++YT+++ +++
Sbjct: 509 QMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCN 568
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK---LSQIEELVKL 561
+ F E + D + +GV K L I+E V L
Sbjct: 569 QLQKARSFLEEMIGEEILPDEVLC---IGVLKKHYELGCIDEAVGL 611
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 175/403 (43%), Gaps = 27/403 (6%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD ++S ++ K + + ++Y E K+ +P + L+ + +
Sbjct: 201 PDVITYNSLINCFCKSGKLPK-GLEFYREMKQ-SGLKPNVVSYSTLVDAFCKEDMMQQAI 258
Query: 138 SLSEDFKIYNVLPDAHTCSRLV-ASCVRAR---KFKIANTLLQVFITDGEIALLAFNSAM 193
D + +P+ T + LV A+C F++AN +L+V + E ++ + + +
Sbjct: 259 KFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGV---EWNVVTYTALI 315
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL- 252
G ++ KM +AG++ + Y ++ + K + ++ L E K R +
Sbjct: 316 DGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQ 375
Query: 253 -DSTPFSTHMYKILCDSLGKSGRAFEALKF-FRDMKEKGILEDPSIYASLICSFASITEV 310
D + T ++ LC L K EA K +M+E GI + IY +L+ ++
Sbjct: 376 PDLLLYGTFIWG-LC-GLEK----IEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNP 429
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIE----EGLVEKTLDVVESMKNA-KLKISDC 365
L +E +E D EV + + I+ LV K +D M N L+ +
Sbjct: 430 TEGLHLLEEMQE----LDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAA 485
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
+ A+++G K AA ++EQ+ +G +P + Y S+++ + +A + +M
Sbjct: 486 VYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKM 545
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+ G ++AY+S+V + + +++ A + +M + P+
Sbjct: 546 AEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPD 588
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 4/185 (2%)
Query: 181 DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSA-GIVLDSGCYCQIMEAYYKIGDSEK 239
D E+ ++ F + G K + I + +M + G+ ++ Y +++ K +
Sbjct: 443 DHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKA 502
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
LF + L P T Y L D K G EAL M E G+ D Y S
Sbjct: 503 ATTLFEQMAQEGL--VPDRT-AYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTS 559
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
L+ F+ +++ A +E + +L D +C+ ++ + E G +++ + + + +
Sbjct: 560 LVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKHQ 619
Query: 360 LKISD 364
L SD
Sbjct: 620 LLTSD 624
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 220/485 (45%), Gaps = 22/485 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +++R L D V+L + + V PD T S L+ + + A L
Sbjct: 156 PNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDL 215
Query: 175 L-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKM-KSAGIVLDSGCYCQIMEAYY 232
L ++ + + ++ +N+ +GG K + + V++K+ K G + Y +++
Sbjct: 216 LDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLC 275
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K G ++V ++ + L + Y IL L +SG A + + ++ + G++
Sbjct: 276 KFGRFKEVGEVWERMVANNLQPDVIT---YGILIHGLCRSGDVDGAARVYSEIIKTGLVI 332
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGM--LRDPEVCLKLVLMYIEEGLVEKTLD 350
D ++Y SL+ F V+ A + + A G+ LR + +K + + G+V++ ++
Sbjct: 333 DAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLF---DSGMVDEAIE 389
Query: 351 VVESMKNAKLKISDCISCAIV------NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+ + ++ I D ++ + NGF+ + A ++E+ G +Y+S
Sbjct: 390 LWDLLEKDVACIPDTVTFGTLIHGLCQNGFANK-----AFTIFEEARVSGKQLDVFSYSS 444
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+IN C + A KV+ +M + G Y+++++ + + R DA+ + +KM G
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG 504
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
C P V YN+L+D +A+ ++ + +EM TPD +Y ++I ++ D +
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDAL 564
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS-EGTKLDERLYHSAMNA 583
+ + G +D + I++ +++E + + DMK + + Y++ M+
Sbjct: 565 SIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDG 624
Query: 584 LRDAG 588
L + G
Sbjct: 625 LYETG 629
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 108/514 (21%), Positives = 198/514 (38%), Gaps = 74/514 (14%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T L+ L + + D + L ++ V PD + L+ C +A +F+ +
Sbjct: 191 PDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRV 250
Query: 175 LQVFITD--GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+ D L +N + G K + V+E+M + + D Y ++
Sbjct: 251 WDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLC 310
Query: 233 KIGDSEKVAALFLE--------------------CKSRKL-------DSTPFST----HM 261
+ GD + A ++ E C++ ++ DS F+
Sbjct: 311 RSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRT 370
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGI--LEDPSIYASLICSFASITEVKLAEELFKE 319
Y I+ L SG EA++ + D+ EK + + D + +LI A +F+E
Sbjct: 371 YNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE 429
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
A G D ++ G + + V E M K + I A+++GF +
Sbjct: 430 ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYR 489
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
AV++Y ++ GC P +TY ++I+ C+ Y +A V EM + GF + Y S
Sbjct: 490 TSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS 549
Query: 440 MV---------------------------------AMYG--KTGRIRDAMWLVAKMKAK- 463
++ ++G G++ +A+ + + MK K
Sbjct: 550 LIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKK 609
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
C PN+ YN+LMD + + LW + + PD +SY T I
Sbjct: 610 NCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEG 669
Query: 524 VKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIE 556
++ +E ++ G+I I I+V K I+
Sbjct: 670 IQLLDEV-LSRGIIPTVITWNILVRAVIKYGPIQ 702
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 95/483 (19%), Positives = 198/483 (40%), Gaps = 61/483 (12%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ L G K + +++ +++ K P RP +T +++ L + ++ +
Sbjct: 226 PDVVCYNALLGGCFKAGEFEKVMR-VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVG 284
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA-------------------NTLLQVF 178
+ E N+ PD T L+ R+ A N+L++ F
Sbjct: 285 EVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGF 344
Query: 179 ITDGEI--ALLAFNSA-MGGYNKLHMY-------YSTILVYEKM-------KSAGIVLDS 221
G + A ++SA G L Y + + +V E + K + D+
Sbjct: 345 CQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDT 404
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECK--SRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
+ ++ + G + K +F E + ++LD +S+ M LC+ GR +A+
Sbjct: 405 VTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSS-MINGLCNV----GRLVDAV 459
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
K + M + G + IY +LI F + A ++ + + G C V+ Y
Sbjct: 460 KVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG-------CSPTVITY 512
Query: 340 --IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA------AVKVYEQLI 391
+ +GL K E+ A+ + + + I S RG ++ A+ +++Q++
Sbjct: 513 NTLIDGLC-KAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQIL 571
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK-GFDKCVVAYSSMVAMYGKTGRI 450
+G + + +I+ C +A VF +M++K +V Y++++ +TG I
Sbjct: 572 YKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYI 631
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
A L + G EP++ YN+ + + + +L E+ R + P +++ +
Sbjct: 632 DKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNIL 691
Query: 511 ISA 513
+ A
Sbjct: 692 VRA 694
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/129 (19%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER----RKVTPDKVSYTTVISAYNRARE 519
GC P + +N+L+D RA+ + + + R++ P+ +Y V+ + +
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
D V ++ R DR ++ +K +++ + LL +M + D Y++
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233
Query: 580 AMNALRDAG 588
+ AG
Sbjct: 234 LLGGCFKAG 242
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 184/424 (43%), Gaps = 38/424 (8%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+++M G+ D+ Y ++ Y IG ++V + E + L ++ Y L +
Sbjct: 260 VFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYT---YGSLLN 316
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L +GR EA FF M KGI + +IY LI +A+ + +L E G+
Sbjct: 317 YLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSP 376
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D + + Y ++ ++++ + + MK L A+++ K AV +
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKF 436
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF------------DKC-- 433
Q++++G P + S++ C + + KA++ + EM +G + C
Sbjct: 437 NQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTK 496
Query: 434 ---------------------VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
V++Y++++ + GRI +A + M + G +P+ W Y
Sbjct: 497 GQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTY 556
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N+L+ + RA + +++EM R +TP V+Y+T++ R F + Y
Sbjct: 557 NTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMIT 616
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
+G + I I++ SK + ++E KL Q + S+ +L+ ++ + AL +G
Sbjct: 617 SGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNED 676
Query: 593 AQWL 596
A L
Sbjct: 677 AMHL 680
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 156/368 (42%), Gaps = 16/368 (4%)
Query: 222 GCYCQIMEAYYKIGDSEKVAALF-LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALK 280
GC+C ++G E A F L KS + + K LCD+ R EA+
Sbjct: 102 GCFC-------RMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDA----KRLREAMD 150
Query: 281 FF-RDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE-AEEKGMLRDPEVC--LKLV 336
+ M E G D Y +L+ F + + A EL A+ +G P V ++
Sbjct: 151 ILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVI 210
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+ EG V+K ++ M + ++ + +++G K + A V++Q+I +G
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P TY +I+ Y I + + ++ EM G Y S++ GR R+A +
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFF 330
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
M KG +PNV IY L+ + L ++ L M ++PD + + +AY +
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
D + +N+ + G D G ++ KL ++++ V M +EG + +
Sbjct: 391 KAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450
Query: 577 YHSAMNAL 584
++S + L
Sbjct: 451 FNSLVYGL 458
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/479 (20%), Positives = 191/479 (39%), Gaps = 39/479 (8%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY-NKLHMYYST 205
V PD T S L+ R + + + + G + + N + G + + +
Sbjct: 90 VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
++ ++M G D Y +++ + +E+ L + S P + Y +
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ G+ +A F +M ++GI + Y ++I V AE +F++ +KG+
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV------NGFSK--- 376
D + L+ Y+ G ++ + ++E M LK DC + + NG +
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLK-PDCYTYGSLLNYLCNNGRCREAR 328
Query: 377 -------RRGYWAAVKVYEQLI--------------------SQGCIPGQVTYASIINAY 409
R+G V +Y LI G P + I AY
Sbjct: 329 FFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ A+ +A +F +M+Q+G VV + +++ K GR+ DA+ +M +G PN+
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
+++NSL+ + ++ + EM + + PD V + T++ + + +
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G D ++G + +I+E K L M S G K DE Y++ ++ AG
Sbjct: 509 MERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAG 567
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/461 (19%), Positives = 178/461 (38%), Gaps = 74/461 (16%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV------ASCVRARK 167
+P+ T LI + KW +V + E+ + + PD +T L+ C AR
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329
Query: 168 F-------------KIANTLLQVFITDGEIALL-----------------AFNSAMGGYN 197
F I L+ + T G ++ + FN Y
Sbjct: 330 FFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
K M + ++ KMK G+ D + +++A K+G + F + + + F
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
++ L L + +A +F+ +M +GI D + +++C+ + +V A+ L
Sbjct: 450 ---VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLI 506
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E G D L+ + G +++ ++ M + LK + +++G+ +
Sbjct: 507 DLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRA 566
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG-------- 429
A V+ +++ G PG VTY++I++ +S+A+++++ M G
Sbjct: 567 GRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIY 626
Query: 430 ---------------------------FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
F + ++ M+ K+GR DAM L A + +
Sbjct: 627 NIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISS 686
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
G P+V+ Y + + L + + L+ ME+ TP+
Sbjct: 687 YGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPN 727
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 181/420 (43%), Gaps = 43/420 (10%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +L+R L +S+ D + P+ T + LVA+ RA + A L
Sbjct: 188 PNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERL 247
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + G + L+ FNS + G K V+++M G+ D Y ++ Y K
Sbjct: 248 VGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCK 307
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G S EAL F +M +KGI+ D
Sbjct: 308 AGCSH--------------------------------------EALSVFAEMTQKGIMPD 329
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ SLI ++ A L ++ E+G+ + L+ + ++G ++ L V
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
MK ++K S A++NG+ A ++ ++ ++G P VTY++II+AYC+
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
A ++ +M +KG + YSS++ + R+ DA L M G +P+ + Y
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR-AREFD---MCVKFYNE 529
SL+D H + N+ L +M + V PD V+Y+ +I+ ++ AR + + K Y+E
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 569
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 182/387 (47%), Gaps = 11/387 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGD---SEKVAALFLECKSRKLDSTPFSTHMYKI 264
+ M+ AG + Y ++ A+++ G+ +E++ + E K + F++ M
Sbjct: 212 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMRE-GGLKPNLVTFNS-MVNG 269
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
+C K+G+ +A K F +M +G+ D Y +L+ + A +F E +KG
Sbjct: 270 MC----KAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 325
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
++ D L+ + + G +E+ + +V M+ L++++ A+++GF K+ G+
Sbjct: 326 IMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKK-GFLDDA 384
Query: 385 KVYEQLISQGCI-PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+ + + Q I P V Y ++IN YC + +A ++ EM+ KG VV YS++++
Sbjct: 385 LLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISA 444
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
Y K A L +M KG P+ Y+SL+ + K L L+K M + + PD
Sbjct: 445 YCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPD 504
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+ +YT++I + + + + +++ G + D +++ SK ++ E +LL
Sbjct: 505 EFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLF 564
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQ 590
+ E Y + M+ R A L+
Sbjct: 565 KLYHEDPIPANTKYDALMHCCRKAELK 591
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 153/333 (45%), Gaps = 4/333 (1%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D + + Y IL +L G EAL RDM+ G + Y +L+ +F EV
Sbjct: 184 DGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDG 243
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
AE L E G+ + +V + G +E V + M L +V
Sbjct: 244 AERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVG 303
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G+ K A+ V+ ++ +G +P VT+ S+I+ C+ +A + +M+++G
Sbjct: 304 GYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQM 363
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
V +++++ + K G + DA+ V MK +P+V YN+L++ + + + +L
Sbjct: 364 NEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELL 423
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF-YNEFRMNGGVIDRAIA-GIMVGVFS 550
EME + + PD V+Y+T+ISAY + D F N+ + GV+ AI ++ V
Sbjct: 424 HEMEAKGLKPDVVTYSTIISAY--CKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLC 481
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++ + L ++M G + DE Y S ++
Sbjct: 482 GEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDG 514
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%)
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+A + ++ ++S G P TY ++ A C +A + +M+ G VV Y+++V
Sbjct: 173 SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLV 232
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
A + + G + A LV M+ G +PN+ +NS+++ +A + K++ EM R +
Sbjct: 233 AAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLA 292
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD VSY T++ Y +A + + E G + D ++ V K +E V L
Sbjct: 293 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTL 352
Query: 562 LQDMKSEGTKLDE 574
++ M+ G +++E
Sbjct: 353 VRQMRERGLQMNE 365
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 173/412 (41%), Gaps = 31/412 (7%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ F+S ++GM K + ++ A ++E + P+ + L+ ++ +
Sbjct: 258 PNLVTFNSMVNGMCKAGKMED-ARKVFDEMVR-EGLAPDGVSYNTLVGGYCKAGCSHEAL 315
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
S+ + ++PD T + L+ +A + A TL++ G ++ + F + + G+
Sbjct: 316 SVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGF 375
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDS 254
K +L MK I CY ++ Y +G ++ L +E K K D
Sbjct: 376 CKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDV 435
Query: 255 TPFST--HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
+ST Y CD+ A + + M EKG+L D Y+SLI +
Sbjct: 436 VTYSTIISAYCKNCDT-------HSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSD 488
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-V 371
A LFK + G+ D L+ + +EG VE L + + M A + + D ++ ++ +
Sbjct: 489 AHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGV-LPDVVTYSVLI 547
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN---------------AYCRIALYS 416
NG SK A ++ +L + IP Y ++++ +C L +
Sbjct: 548 NGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMN 607
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+A+KV+ M + ++ YS ++ + + G + A+ +M G PN
Sbjct: 608 EADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPN 659
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 105/232 (45%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+V R A+ + + GC P VTY +++ A+ R AE++ M++ G
Sbjct: 196 LVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGG 255
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+V ++SMV K G++ DA + +M +G P+ YN+L+ + +A +
Sbjct: 256 LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEAL 315
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
++ EM ++ + PD V++T++I +A + V + R G ++ ++ F
Sbjct: 316 SVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGF 375
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
K +++ + ++ MK K Y++ +N G +A+ L E
Sbjct: 376 CKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 427
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 122/291 (41%), Gaps = 26/291 (8%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
ELN+ + +PDA + S + + + + + A+ + KL +P++ T LI
Sbjct: 456 ELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSD-AHVLFKNMIKL-GLQPDEFTYTSLID 513
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVR-ARKFKIANTLLQVFITDGEI 184
+ +S +SL + VLPD T S L+ + AR + L +++ D
Sbjct: 514 GHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIP 573
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
A +++ M K ++KS +L C +M +++KV
Sbjct: 574 ANTKYDALMHCCRK-----------AELKSVLALLKGFCMKGLMN------EADKVYQSM 616
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
L+ ++ LD + +Y +L ++G +AL F + M + G + + SLI
Sbjct: 617 LD-RNWNLDGS-----VYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGL 670
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
V A+++ ++ L D E L+ + + EG V+ LDV+ M
Sbjct: 671 FENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGM 721
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 60/317 (18%), Positives = 124/317 (39%), Gaps = 30/317 (9%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS----CVRARKF 168
+P LI + D L + + + PD T S ++++ C F
Sbjct: 396 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAF 455
Query: 169 KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
++ +L+ + I + + G +L + ++++ M G+ D Y ++
Sbjct: 456 ELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAH---VLFKNMIKLGLQPDEFTYTSLI 512
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
+ + K G+ E +AL L K K P Y +L + L KS RA EA + +
Sbjct: 513 DGHCKEGNVE--SALSLHDKMVKAGVLP-DVVTYSVLINGLSKSARAMEAQQLLFKLYH- 568
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
EDP + T+ ++AE K +L L+ + +GL+ +
Sbjct: 569 ---EDP---------IPANTKYDALMHCCRKAELKSVL-------ALLKGFCMKGLMNEA 609
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
V +SM + + + +++G + A+ ++Q++ G P + S+I
Sbjct: 610 DKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRG 669
Query: 409 YCRIALYSKAEKVFIEM 425
+ +A++V ++
Sbjct: 670 LFENGMVVEADQVIQQL 686
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 185/428 (43%), Gaps = 54/428 (12%)
Query: 188 AFNSAMGGYNKLHMYYSTIL-------VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
AF +G YN L Y L + +M+ A V + + ++ Y G EK
Sbjct: 99 AFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKA 158
Query: 241 AALFLECKSRKLDSTPFSTHMY-KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
LF++ + R P + + + +L D+ K R EAL FRD+++ + Y
Sbjct: 159 EELFVQMQKRGYSPGPLACNTFLHVLEDA--KEYRRAEAL--FRDLEKYECEPNIDTYNR 214
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKN 357
+I + E AE L++ + + P +C LM + +GL + + ++
Sbjct: 215 MIVIYGKAGEPSKAEMLYRSM--RRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQE 272
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
K A++ +S+ A+++++ + GC P V++ +INAY R LY
Sbjct: 273 FDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYED 332
Query: 418 AEKVFIEMQQKGFDKCV-----------------------------------VAYSSMVA 442
AEK+F MQ GF + + Y++++
Sbjct: 333 AEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALIN 392
Query: 443 MYGKTGRIRDAMWLVAKM---KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
YG +GR D L+AKM +K +P++ YN+L+ ++ +A + + E+L++ + R K
Sbjct: 393 AYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEELFQGLARLK 452
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ PD ++T ++ Y + + + C + +G D A ++ Q+E++
Sbjct: 453 LVPDATTWTALMGGYAKKKLYRKCTSILKKMLESGCRADAVTARVLFSACRSPEQVEQVT 512
Query: 560 KLLQDMKS 567
+L++ ++
Sbjct: 513 QLMESLQG 520
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 157/354 (44%), Gaps = 5/354 (1%)
Query: 252 LDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
L T F + Y +L D+ GKS +A K F M+E + + + LI +
Sbjct: 95 LQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGS 154
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
+ AEELF + +++G P C + + + + + ++ + + +
Sbjct: 155 FEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNR 214
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++ + K A +Y + C P T+ +++NA+ R LY +AE+ F ++Q+
Sbjct: 215 MIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFD 274
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ AY++++ Y + G A+ + M+ GC P+ +N L++ +GRA E
Sbjct: 275 YKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAE 334
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
K++K M+ +P+ S ++SAY RA + + + +G D I ++ +
Sbjct: 335 KIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINAY 394
Query: 550 SKLSQIEELVKLLQDM---KSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ E++ LL M S+ TK D Y++ + AG +A+ L Q
Sbjct: 395 GVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEELFQGL 448
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/388 (18%), Positives = 154/388 (39%), Gaps = 7/388 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + T +LI + ++ L + P C+ + A++++ A L
Sbjct: 137 PNEETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEAL 196
Query: 175 LQVFIT-DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + E + +N + Y K ++Y M+ A + + +M A+ +
Sbjct: 197 FRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFAR 256
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G + F K ++ D P + Y L ++ + G AL+ F+ M+ G D
Sbjct: 257 QGLYREAERYF--DKLQEFDYKP-DHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPD 313
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ LI ++ + AE++FK + G + + + L+ Y G VE+ ++V
Sbjct: 314 TVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVS 373
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI---SQGCIPGQVTYASIINAYC 410
+M+ K I A++N + + + +++ S+ P TY ++I Y
Sbjct: 374 AMERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYA 433
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ KAE++F + + +++++ Y K R ++ KM GC +
Sbjct: 434 QAGFIPKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKMLESGCRADAV 493
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERR 498
L + + QV +L + ++ R
Sbjct: 494 TARVLFSACRSPEQVEQVTQLMESLQGR 521
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 190/404 (47%), Gaps = 5/404 (1%)
Query: 181 DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
D IA+ +++ M GY + ++V++++K G Y ++ Y K+G K+
Sbjct: 447 DAPIAI--YHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVG---KI 501
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
+ + K + + Y ++ + K A F DM ++G+ D +Y ++
Sbjct: 502 SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 561
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
I +F + + A + KE ++ + ++ + + G + ++L+V + M+
Sbjct: 562 IAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGC 621
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ A++NG ++R AV++ +++ G + TY I+ Y + KA +
Sbjct: 622 VPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 681
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
F +Q +G + + Y +++ K+GR++ A+ + +M A+ N ++YN L+D
Sbjct: 682 YFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 741
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
R ++ + L ++M++ V PD +YT+ ISA ++A + + + E G +
Sbjct: 742 RRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIK 801
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ +++ S E+ + ++MK+ G K D+ +YH + +L
Sbjct: 802 TYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSL 845
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 183/452 (40%), Gaps = 75/452 (16%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC-KSRKLDSTPFSTHMYKILC 266
+E+M++ GI S Y ++ AY D E+ L C + K + S Y ++
Sbjct: 332 TFERMRARGITPTSRIYTSLIHAYAVGRDMEEA----LSCVRKMKEEGIEMSLVTYSVIV 387
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG-- 324
K+G A A +F + K + SIY +I + ++ AE L +E EE+G
Sbjct: 388 GGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGID 447
Query: 325 --------------MLRD-----------------PEVCLK--LVLMYIEEGLVEKTLDV 351
M+ D P V L+ +Y + G + K L+V
Sbjct: 448 APIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 507
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
MK +K + ++NGF K + + A V+E ++ +G P + Y +II A+C
Sbjct: 508 SRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCG 567
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ +A + EMQ+ + ++ + K+G +R ++ + M+ GC P V
Sbjct: 568 MGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHT 627
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+N+L++ + + + ++ EM V+ ++ +YT ++ Y + +++ +
Sbjct: 628 FNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 687
Query: 532 MNG------------------GVIDRAIA-----------------GIMVGVFSKLSQIE 556
G G + A+A I++ +++ +
Sbjct: 688 NEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW 747
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E L+Q MK EG K D Y S ++A AG
Sbjct: 748 EAADLIQQMKKEGVKPDIHTYTSFISACSKAG 779
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 159/358 (44%), Gaps = 3/358 (0%)
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y + GD + F ++R + TP ++ +Y L + EAL R MKE+GI
Sbjct: 320 YGRRGDMHRARETFERMRARGI--TP-TSRIYTSLIHAYAVGRDMEEALSCVRKMKEEGI 376
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
Y+ ++ F+ + A+ F EA+ + + K++ + + +E+
Sbjct: 377 EMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEA 436
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+V M+ + I +++G++ + V+++L G P VTY +IN Y
Sbjct: 437 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYT 496
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
++ SKA +V M+++G + YS M+ + K +A + M +G +P+V
Sbjct: 497 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 556
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+YN+++ N+ + + KEM++ + P ++ +I+ + ++ + ++ ++
Sbjct: 557 LYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMM 616
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
R G V ++ + Q+E+ V++L +M G +E Y M G
Sbjct: 617 RRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 674
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/372 (19%), Positives = 160/372 (43%), Gaps = 6/372 (1%)
Query: 108 KKLPE--FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
K+L E F P T LI + K + +S K V + T S ++ V+
Sbjct: 474 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 533
Query: 166 RKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
+ + A + + + +G + ++ +N+ + + + I ++M+ + +
Sbjct: 534 KDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 593
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
I+ + K GD + +F R+ P + H + L + L + + +A++ +
Sbjct: 594 MPIINGFAKSGDMRRSLEVF--DMMRRCGCVP-TVHTFNALINGLVEKRQMEKAVEILDE 650
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M G+ + Y ++ +AS+ + A E F + +G+ D L+ + G
Sbjct: 651 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGR 710
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
++ L V + M + + + +++G+++R W A + +Q+ +G P TY S
Sbjct: 711 MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTS 770
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
I+A + ++A + EM+ G + Y++++ + + A+ +MKA G
Sbjct: 771 FISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAVG 830
Query: 465 CEPNVWIYNSLM 476
+P+ +Y+ L+
Sbjct: 831 LKPDKAVYHCLL 842
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 71/147 (48%)
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
+ MV YG+ G + A +M+A+G P IY SL+ + +++ + ++M+
Sbjct: 313 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMK 372
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ V+Y+ ++ +++A + +++E + ++ +I G ++ + +E
Sbjct: 373 EEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 432
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNA 583
L+++M+ EG +YH+ M+
Sbjct: 433 RAEALVREMEEEGIDAPIAIYHTMMDG 459
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/223 (18%), Positives = 84/223 (37%), Gaps = 35/223 (15%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + + ++ Y R +A + F M+ +G Y+S++ Y + +A+
Sbjct: 308 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSC 367
Query: 457 VAKMKAKGCEP-----------------------------------NVWIYNSLMDMHGR 481
V KMK +G E N IY ++ H +
Sbjct: 368 VRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQ 427
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
N+ + E L +EME + Y T++ Y + + + + G
Sbjct: 428 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVT 487
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G ++ +++K+ +I + +++ + MK EG K + + Y +N
Sbjct: 488 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 530
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 155/324 (47%)
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L K G+ + +FF+DM G Y +I +V+ A LF+E + +G
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
++ D ++ + + G ++ T+ E MK+ + A++N F K +
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+ Y ++ G P V+Y+++++A+C+ + +A K +++M++ G Y+S++
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K G + DA L +M G E NV Y +L+D A+ +++ E+L+ +M+ V P+
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
SY +I + +A+ D ++ NE + G D + G + L +IE ++ +
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 532
Query: 565 MKSEGTKLDERLYHSAMNALRDAG 588
MK G K + +Y + M+A +G
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSG 556
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 164/370 (44%), Gaps = 7/370 (1%)
Query: 199 LHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFS 258
L M I + KMK + + ++ + K+G ++ V F + T F+
Sbjct: 205 LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFT 264
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
Y I+ D + K G A F +MK +G++ D Y S+I F + + F+
Sbjct: 265 ---YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 319 EAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E K M +P+V L+ + + G + L+ MK LK + +V+ F K
Sbjct: 322 EM--KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 379
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A+K Y + G +P + TY S+I+A C+I S A ++ EM Q G + VV
Sbjct: 380 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 439
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++++ R+++A L KM G PN+ YN+L+ +AKN+ + +L E++
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 499
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
R + PD + Y T I + + NE + G + I ++ + K
Sbjct: 500 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 559
Query: 557 ELVKLLQDMK 566
E + LL +MK
Sbjct: 560 EGLHLLDEMK 569
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/530 (20%), Positives = 210/530 (39%), Gaps = 42/530 (7%)
Query: 71 SHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQS 130
S VP FD+ L +L D E A +++ K+ F +S LL R+ +
Sbjct: 183 STRNVCVPGFGVFDA-LFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRF-AKL 240
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAF 189
K D + +D P T + ++ + + A L + G + + +
Sbjct: 241 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 300
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
NS + G+ K+ T+ +E+MK D Y ++ + K G + E K
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
L S Y L D+ K G +A+KF+ DM+ G++ + Y SLI + I
Sbjct: 361 NGLKPNVVS---YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
+ A L E + G +E +V T A
Sbjct: 418 LSDAFRLGNEMLQVG---------------VEWNVVTYT--------------------A 442
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++G A +++ ++ + G IP +Y ++I+ + + +A ++ E++ +G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
++ Y + + +I A ++ +MK G + N IY +LMD + ++ N +
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV-IDRAIAGIMVGV 548
L EM+ + V++ +I + + V ++N + G+ + AI M+
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDG 622
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
K +Q+E L + M +G D Y S M+ G ++A L+
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 672
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 110/521 (21%), Positives = 210/521 (40%), Gaps = 25/521 (4%)
Query: 51 HRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKL 110
HRF ++ + + +D A P ++ + M K+ E A + E K
Sbjct: 235 HRFAKLGKTDDVK--RFFKDMIGAGARPTVFTYNIMIDCMCKEGDV-EAARGLFEEMK-- 289
Query: 111 PEFR---PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARK 167
FR P+ T +I + + D V E+ K PD T + L+ + K
Sbjct: 290 --FRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 168 FKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQ 226
I + +G + ++++++ + + K M I Y M+ G+V + Y
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
+++A KIG+ L E ++ ++ Y L D L + R EA + F M
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVE---WNVVTYTALIDGLCDAERMKEAEELFGKMD 464
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL-- 344
G++ + + Y +LI F + A EL E + +G+ P++ L ++ GL
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI--KPDLLLYGTFIW---GLCS 519
Query: 345 ---VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
+E V+ MK +K + I +++ + K + + +++ VT
Sbjct: 520 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 579
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQK-GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
+ +I+ C+ L SKA F + G +++M+ K ++ A L +M
Sbjct: 580 FCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM 639
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
KG P+ Y SLMD + + N+ + L +M + D ++YT+++ + +
Sbjct: 640 VQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQL 699
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
F E G D + ++ +L I+E V+L
Sbjct: 700 QKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 58/307 (18%), Positives = 122/307 (39%), Gaps = 39/307 (12%)
Query: 76 AVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
+P+ +++ +HG +K + + A + NE K +P+ I L +K ++
Sbjct: 468 VIPNLASYNALIHGFVK-AKNMDRALELLNELKG-RGIKPDLLLYGTFIWGLCSLEKIEA 525
Query: 136 IVSLSEDFK---------IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG---- 182
+ + K IY L DA+ FK N + + D
Sbjct: 526 AKVVMNEMKECGIKANSLIYTTLMDAY--------------FKSGNPTEGLHLLDEMKEL 571
Query: 183 --EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSA-GIVLDSGCYCQIMEAYYKIGDSEK 239
E+ ++ F + G K + + + ++ + G+ ++ + +++ K E
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631
Query: 240 VAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
LF + + L D T +++ M D K G EAL M E G+ D Y
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLM-----DGNFKQGNVLEALALRDKMAEIGMKLDLLAY 686
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
SL+ + +++ A +E +G+ D +C+ ++ + E G +++ +++ +
Sbjct: 687 TSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746
Query: 358 AKLKISD 364
+L SD
Sbjct: 747 HQLLTSD 753
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 160/356 (44%), Gaps = 4/356 (1%)
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
S GI LD Y +M+ Y+K G+ ++ E + + F Y L L + G
Sbjct: 509 SKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQ---FDVVAYNALTKGLLRLG 565
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
+ +E F M E G+ D Y S++ ++ + + A +L E + G++ +
Sbjct: 566 K-YEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYN 624
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ 393
L+ + G +EK + V+ M + I ++ +S+ R A ++++++L+
Sbjct: 625 ILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDM 684
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G Q+ Y ++I CR+ + KA V EM KG +V Y++++ Y + A
Sbjct: 685 GLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKA 744
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
++M G PN+ YN+L++ +R +KL EM R + P+ +Y ++S
Sbjct: 745 FNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSG 804
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ R +K Y E G + +++ ++K ++ + +LL +M + G
Sbjct: 805 HGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRG 860
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/492 (20%), Positives = 202/492 (41%), Gaps = 72/492 (14%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTIL 207
V+P+ + + LV S + +A L+ + D + +N+ + G+ K +
Sbjct: 41 VVPNVFSVNLLVHSLCKVGDLGLALGYLRNSVFDH----VTYNTVVWGFCKRGLADQGFG 96
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDSTPFSTHMYKIL 265
+ +M G+ DS +++ Y +IG + + L LD+ +T L
Sbjct: 97 LLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNT-----L 151
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL------FKE 319
D + G AL D + G+ D Y +L+ +F ++ AE + F+
Sbjct: 152 VDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRR 211
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+E G+L D V +T D + ++ + + I+ + K RG
Sbjct: 212 DDESGVLNDCGV---------------ETWDGLRDLQPTVVTWTTLIA-----AYCKHRG 251
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+YEQ+I G +P VT +SI+ CR ++A + EM G D V+Y++
Sbjct: 252 IDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTT 311
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCE--------------------------------- 466
+++ K+GR+ +A ++M +G
Sbjct: 312 IISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLN 371
Query: 467 --PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
PN Y +L+D H + ++ E + ++ME+ V P+ V+++++I+ Y + + V
Sbjct: 372 LVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAV 431
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + + + + I++ + + Q E ++MKS G + + ++ +N L
Sbjct: 432 EVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNL 491
Query: 585 RDAGLQMQAQWL 596
+ +G +AQ L
Sbjct: 492 KRSGGMKEAQSL 503
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 172/396 (43%), Gaps = 37/396 (9%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+YE+M +G++ D I+ + G + A L E + LD S Y +
Sbjct: 258 LYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVS---YTTIIS 314
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+L KSGR EA M +GI D + +++ + K AEE+F+ + ++
Sbjct: 315 ALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVP 374
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ L+ + + G VE V++ M+ + + +I+NG++K+ AV+V
Sbjct: 375 NCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVL 434
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++ +P YA +++ Y R + A + EM+ G ++ + + ++ ++
Sbjct: 435 RKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRS 494
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK-------- 499
G +++A L+ + +KG +V+ Y+SLMD + + N + +EM +
Sbjct: 495 GGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAY 554
Query: 500 --------------------------VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+TPD V+Y +V++ Y + + + NE +
Sbjct: 555 NALTKGLLRLGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSY 614
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
G + + I++G K IE+++ +L +M + G
Sbjct: 615 GVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVG 650
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 108/501 (21%), Positives = 212/501 (42%), Gaps = 35/501 (6%)
Query: 110 LPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFK 169
L + +P T LI + + D SL E + V+PD TCS ++ R K
Sbjct: 229 LRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLT 288
Query: 170 IANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTIL--------VYE------KMKSA 215
A LL+ +N G + H+ Y+TI+ V E +M
Sbjct: 289 EAAMLLREM----------YNM---GLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVR 335
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
GI +D +M+ +K G S++ +F KL+ P + Y L D K G
Sbjct: 336 GISIDLVLCTTMMDGLFKAGKSKEAEEMFQTI--LKLNLVP-NCVTYTALLDGHCKVGDV 392
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
A + M+++ +L + ++S+I +A + A E+ ++ + ++ P V +
Sbjct: 393 EFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIM--PNVFVYA 450
Query: 336 VLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ 393
+L+ Y G E + MK+ L+ ++ I ++N + G A + + ++S+
Sbjct: 451 ILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSK 510
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G Y+S+++ Y + S A V EM +K VVAY+++ + G+ +
Sbjct: 511 GIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGK-YEP 569
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ ++M G P+ YNS+M+ + L EM+ V P+ V+Y +I
Sbjct: 570 KSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGG 629
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ + + +E G V I ++ +S+ + + ++++ + + G L+
Sbjct: 630 LCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLN 689
Query: 574 ERLYHSAMNALRDAGLQMQAQ 594
+ +Y++ + L G+ +A
Sbjct: 690 QMVYNTLITVLCRLGMTKKAN 710
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 17/168 (10%)
Query: 358 AKLKISDCISCAIV-NGFSKRRGYWAAVKVYEQLISQG----CIPGQVTYASIINAYCRI 412
K+ S+ + C +V N FS + KV + ++ G + VTY +++ +C+
Sbjct: 29 VKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYLRNSVFDHVTYNTVVWGFCKR 88
Query: 413 ALYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
L + + EM +KG FD V + +V Y + G ++ A W++ + G +
Sbjct: 89 GLADQGFGLLSEMVKKGVCFDS--VTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAI 146
Query: 471 IYNSLMDMHGR----AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
N+L+D + ++ L VE WK V PD V+Y T+++A+
Sbjct: 147 GLNTLVDGYCEVGLVSRALDLVEDGWKN----GVKPDIVTYNTLVNAF 190
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 181/432 (41%), Gaps = 38/432 (8%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ S + GY K+H V+E M G + + Y ++ + ++G ++ LF +
Sbjct: 226 FTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQ 285
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
K D Y +L + + G+ EALKFF +M E GI + Y LI F
Sbjct: 286 MKE---DGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCK 342
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD-- 364
+ ++ E+ EKG++ L+ Y + G++E + V++SMK K+ +
Sbjct: 343 VGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRT 402
Query: 365 -----CISC----------------------------AIVNGFSKRRGYWAAVKVYEQLI 391
C C +++G K R +A +++ +I
Sbjct: 403 YNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMI 462
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
G +P Q T+ + I+ C++ +A +VF +++K + Y++++ Y K +
Sbjct: 463 KDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFS 522
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
DA L +M +GC PN +N L+D + + L M + P +YT +I
Sbjct: 523 DAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILI 582
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
R +FD F ++ +G + + + + ++ E +++ +K EG
Sbjct: 583 EEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGIL 642
Query: 572 LDERLYHSAMNA 583
LD +Y +NA
Sbjct: 643 LDSFIYDVLVNA 654
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 151/322 (46%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ + ++ K G A +F + + G D Y SLI + I E+ A ++F+
Sbjct: 193 FNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMP 252
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
++G LR+ L+ + E G +++ L++ MK +V F +
Sbjct: 253 QEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKET 312
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+K +E+++ G P TY +I+ +C++ + ++ M +KG VV +++++
Sbjct: 313 EALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALI 372
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y K G + DA+ ++ MK PN YN L+ R K++ + L +M K++
Sbjct: 373 DGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLS 432
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ V+Y T+I +AR D + ++ +G V D+ + K+ ++E+ ++
Sbjct: 433 PNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQV 492
Query: 562 LQDMKSEGTKLDERLYHSAMNA 583
+ +K + + +E LY + ++
Sbjct: 493 FESLKEKHAEANEFLYTALIDG 514
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 111/542 (20%), Positives = 218/542 (40%), Gaps = 61/542 (11%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSED 142
+ + +HG + + E A + + + K+ F P+ T +L+ + K + E+
Sbjct: 263 YTNLIHGFCEVGKIDE-ALELFFQMKEDGCF-PDVPTYTVLVAAFCEVGKETEALKFFEE 320
Query: 143 FKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHM 201
+ P+ +T + L+ + K +L + G ++ ++ FN+ + GY K M
Sbjct: 321 MVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGM 380
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE--------------- 246
I V + MK + +S Y +++ + + ++ AL +
Sbjct: 381 MEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNT 440
Query: 247 -----CKSRKLDSTPFSTHMY---------KILC---DSLGKSGRAFEALKFFRDMKEKG 289
CK+R +DS H+ + C D L K G+ +A + F +KEK
Sbjct: 441 LIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKH 500
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
+ +Y +LI + + A LFK +G + L+ +EG VE +
Sbjct: 501 AEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAM 560
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+V+ M K + ++ + + A +Q+IS GC P VTY + I AY
Sbjct: 561 SLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAY 620
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
CR +AE++ ++++++G Y +V YG G++ A ++ +M GCEP+
Sbjct: 621 CRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSR 680
Query: 470 WIYNSLM--------DMHGRAKNLRQ------------------VEKLWKEMERRKVTPD 503
Y+ L+ + G +L + L+++M + P+
Sbjct: 681 QTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPN 740
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+Y+ +I + + + +N + +G I ++ KL EE ++LL
Sbjct: 741 VNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLD 800
Query: 564 DM 565
M
Sbjct: 801 SM 802
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 15/234 (6%)
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
VE L +M NA KI + + + Y+ L+ G TY S
Sbjct: 186 VEPNLISFNTMVNAHCKIGNVVV---------AKAYFCG------LMKFGFCCDSFTYTS 230
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I YC+I A KVF M Q+G + V+Y++++ + + G+I +A+ L +MK G
Sbjct: 231 LILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDG 290
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
C P+V Y L+ + K ++EM + P+ +YT +I + + + D +
Sbjct: 291 CFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGM 350
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ + G V ++ + K +E+ + +L MK + R Y+
Sbjct: 351 EMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYN 404
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 86/455 (18%), Positives = 181/455 (39%), Gaps = 48/455 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ +++ +HG+ K + + A+ ++ K F P++ T I L + K +
Sbjct: 433 PNLVTYNTLIHGLCK-ARVVDSAWRLHHLMIK-DGFVPDQRTFCAFIDCLCKMGKVEQAH 490
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+ E K + + + L+ +A KF A+ L + + +G + FN + G
Sbjct: 491 QVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGL 550
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE------CKSR 250
K + + + M Y ++E + D ++ A +FL+ C+
Sbjct: 551 RKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDR-ANMFLDQMISSGCQPN 609
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ T F K C + GR EA + +KE+GIL D IY L+ ++ I ++
Sbjct: 610 VVTYTAF----IKAYC----RQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQL 661
Query: 311 KLAEELFKEAEEKGMLRDPE-----VCLKLVLM--YIEEGLVEKTLDVVESMKNAKL-KI 362
A + + G +P + LK ++ Y +EG+ S+ NA + KI
Sbjct: 662 DSAFGVLIRMFDTGC--EPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKI 719
Query: 363 SD---------------CIS-----CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
+D C+ ++ G K A +++ + G P + +
Sbjct: 720 ADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIH 779
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
S++++ C++ ++ +A ++ M + + +Y +V + G A + + +
Sbjct: 780 NSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLS 839
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
G + ++ L+D R + + +L ME+
Sbjct: 840 CGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEK 874
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/503 (22%), Positives = 219/503 (43%), Gaps = 48/503 (9%)
Query: 104 YNEAKKL----PEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
+NEA L E RP S + L+ + + KK+D +++L + +I V D +TC+
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+ ++ + +A++ L + G E ++ F S + G+ + + + +M G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
I D Y I+++ K G +LF + ++ + MY L + L SGR
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRP---DVVMYTSLVNGLCNSGRWR 229
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+A R M ++ I D + +LI +F + AEEL+ E ++
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNE---------------MI 274
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
M I + T +++NGF A +++ + ++GC
Sbjct: 275 RMSIAPNIFTYT--------------------SLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P V Y S+IN +C+ A K+F EM QKG + Y++++ +G+ G+ A +
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK---VTPDKVSYTTVISA 513
+ M ++G PN+ YN L+ +++ ++++M++R+ V P+ +Y ++
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ + + + + R I I++ K +++ V L + S+G K +
Sbjct: 435 LCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPN 494
Query: 574 ERLYHSAMNALRDAGLQMQAQWL 596
Y + ++ L GL+ +A L
Sbjct: 495 VVTYTTMISGLFREGLKHEAHVL 517
>gi|218191264|gb|EEC73691.1| hypothetical protein OsI_08267 [Oryza sativa Indica Group]
Length = 751
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 133/571 (23%), Positives = 220/571 (38%), Gaps = 79/571 (13%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
E+ YNE K + P+ T ++ R L Q+KK D + + + V PDA S
Sbjct: 185 EMVLAAYNEMKCF-QLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSS 243
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG--------------------- 195
+ RK+ +A +LQ + + +A+N M G
Sbjct: 244 FLIGLCDCRKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQG 303
Query: 196 --------------YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
Y K+ + YE M S GI + +++ + K+G + +V
Sbjct: 304 SNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEVI 363
Query: 242 ALFLECKSRKLD---------STPFSTHM----------YKILCDSLGKSGRAFEALKFF 282
A FL+ K L F + Y IL KSG E
Sbjct: 364 AYFLKFKDSGLHLDKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLL 423
Query: 283 RDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
M ++G+ + Y I F + AE LF EEKG+ + +V Y+
Sbjct: 424 DRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLS 483
Query: 343 GLVEKT-LDVVESMKNAKLKISDCISCA-IVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
G + + V + L D SC+ ++N + A V + ++ +P +
Sbjct: 484 GWTDHAYMLFVRVARQGNL--VDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVI 541
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
+Y+ +I+ YC+ KA F +M Q+G V+ Y+ ++ Y K GR+++A L +M
Sbjct: 542 SYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQM 601
Query: 461 KAKGCEPNVWIYNSLMDMH----------GRAKNLRQV------EKLWKEMERRKVTPDK 504
G +P+V Y L+D H G AK R KL M+ ++ PD
Sbjct: 602 TNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDV 661
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
YT +I +A + ++E G D ++ + +I + LLQ+
Sbjct: 662 PCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQE 721
Query: 565 MKSEGTKLDERLYHSAMN--ALRDAGLQMQA 593
M +G + DE L S +N +LR +Q A
Sbjct: 722 MIDKGIEPDE-LTFSVLNQSSLRSRKIQFCA 751
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 221/495 (44%), Gaps = 36/495 (7%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T LL++++ ++ +++ +++ + K + + PD +T + + S +A+K A
Sbjct: 166 PSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEA--- 222
Query: 175 LQVFITDGEIAL----LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
LQV+ E+ + ++S + G Y ++ +++ + +++ Y +M+
Sbjct: 223 LQVWAEMTEMGVKPDARGYSSFLIGLCDCRKYDLAYVILQEINREKVPVEAMAYNMVMDG 282
Query: 231 YYK---IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
K + ++EK+ LE K+R+ S P + Y L S K G +A+ + M
Sbjct: 283 LCKEMRLDEAEKL----LENKARQ-GSNP-DVYGYSYLIQSYCKMGNLIKAVDHYEAMVS 336
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
GI + I + L+ F + F + ++ G+ ++++G ++
Sbjct: 337 HGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGL-------------HLDKGEMQN 383
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
V E M A ++ + +GF K + +++ QG P +TY I
Sbjct: 384 AQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIV 443
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+CR S+AE +F +++KG D V YSSMV Y +G A L ++ +G
Sbjct: 444 GFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLV 503
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
+ + + L++ R N++ + K M V PD +SY+ +IS Y + + D ++
Sbjct: 504 DHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWF 563
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
++ G ID + I++ + K +++E +L M + G K D Y L D
Sbjct: 564 HDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAY----TVLLDG 619
Query: 588 GLQMQAQWLQQNFEG 602
L+ + LQQ +EG
Sbjct: 620 HLK---ETLQQGWEG 631
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 116/327 (35%), Gaps = 32/327 (9%)
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
R A +F+D + G D S Y+ +I + + K+ LF E PE+ L
Sbjct: 58 RPAIAFAYFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSLFSELVSSSNASGPEI-L 116
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC----AIVNGFSK--RRG-------- 379
LV + +L + I CI+C A + FS R G
Sbjct: 117 PLVDHHRRTCATPCSLSFM-----VDCLIKACITCYDVQATICLFSGICRLGVVPSVWTW 171
Query: 380 ------------YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
Y + Y ++ P T+A + + + +A +V+ EM +
Sbjct: 172 NLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTE 231
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G YSS + + A ++ ++ + YN +MD + L +
Sbjct: 232 MGVKPDARGYSSFLIGLCDCRKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDE 291
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
EKL + R+ PD Y+ +I +Y + V Y +G + I ++
Sbjct: 292 AEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHGIETNCHIVSYLLQ 351
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDE 574
F KL E++ K G LD+
Sbjct: 352 CFRKLGMTSEVIAYFLKFKDSGLHLDK 378
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 184/427 (43%), Gaps = 54/427 (12%)
Query: 189 FNSAMGGYNKLHMYYSTIL-------VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
F +G YN L Y L + +M+ A V + + ++ Y G EK
Sbjct: 100 FRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKAE 159
Query: 242 ALFLECKSRKLDSTPFSTHMY-KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
LF++ + R P + + + +L D+ K R EAL FRD+++ + Y +
Sbjct: 160 ELFVQMQKRGYSPGPLACNTFLHVLEDA--KEYRRAEAL--FRDLEKYECEPNIDTYNRM 215
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNA 358
I + E AE L++ + + P +C LM + +GL + + ++
Sbjct: 216 IVIYGKAGEPSKAEMLYRSM--RRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEF 273
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
K A++ +S+ A+++++ + GC P V++ +INAY R LY A
Sbjct: 274 DYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDA 333
Query: 419 EKVFIEMQQKGFDKCV-----------------------------------VAYSSMVAM 443
EK+F MQ GF + + Y+S++
Sbjct: 334 EKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINA 393
Query: 444 YGKTGRIRDAMWLVAKM---KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
YG +GR D L+AKM +K +P++ YN+L+ ++ +A + + E+L++ + R K+
Sbjct: 394 YGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKL 453
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
PD ++T ++ Y + + + C + +G D A ++ Q+E++ +
Sbjct: 454 VPDATTWTALMGGYAKKKLYRKCTSILKKMLESGCRADAVTARVLFSACRSPEQVEQVTQ 513
Query: 561 LLQDMKS 567
L++ ++
Sbjct: 514 LMESLQG 520
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 157/354 (44%), Gaps = 5/354 (1%)
Query: 252 LDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
L T F + Y +L D+ GKS +A K F M+E + + + LI +
Sbjct: 95 LQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGS 154
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
+ AEELF + +++G P C + + + + + ++ + + +
Sbjct: 155 FEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNR 214
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++ + K A +Y + C P T+ +++NA+ R LY +AE+ F ++Q+
Sbjct: 215 MIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFD 274
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ AY++++ Y + G A+ + M+ GC P+ +N L++ +GRA E
Sbjct: 275 YKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAE 334
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
K++K M+ +P+ S ++SAY RA + + + +G D I ++ +
Sbjct: 335 KIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAY 394
Query: 550 SKLSQIEELVKLLQDM---KSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ E++ LL M S+ TK D Y++ + AG +A+ L Q
Sbjct: 395 GVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGL 448
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/388 (18%), Positives = 154/388 (39%), Gaps = 7/388 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + T +LI + ++ L + P C+ + A++++ A L
Sbjct: 137 PNEETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEAL 196
Query: 175 LQVFIT-DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + E + +N + Y K ++Y M+ A + + +M A+ +
Sbjct: 197 FRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFAR 256
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G + F K ++ D P + Y L ++ + G AL+ F+ M+ G D
Sbjct: 257 QGLYREAERYF--DKLQEFDYKP-DHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPD 313
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ LI ++ + AE++FK + G + + + L+ Y G VE+ ++V
Sbjct: 314 TVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVS 373
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI---SQGCIPGQVTYASIINAYC 410
+M+ K I +++N + + + +++ S+ P TY ++I Y
Sbjct: 374 AMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYA 433
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ +AE++F + + +++++ Y K R ++ KM GC +
Sbjct: 434 QAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKMLESGCRADAV 493
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERR 498
L + + QV +L + ++ R
Sbjct: 494 TARVLFSACRSPEQVEQVTQLMESLQGR 521
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 155/322 (48%), Gaps = 2/322 (0%)
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLI-CSFASITEVKLAEELFKEAEEKGMLRDPEV 331
GR + K F++M +G D ++ + + C F + +V+ +F++ + G L D
Sbjct: 3 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKA-GDVEKGRAIFEDIKGYGFLPDVRS 61
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L+ + G +T + +MK + A+V+GF K A + E++
Sbjct: 62 YSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMK 121
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+ P TY SII+ +I +A +F E + KG + V+ YSS++ +GK GRI
Sbjct: 122 VKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRID 181
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+A ++ +M KG PNV+ +NSLMD +A+ + + ++ M+ K +P+ +Y+ +I
Sbjct: 182 EAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILI 241
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+ R ++++ F+ E + G V + M+ +K+ I + L + K+ G
Sbjct: 242 NGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGI 301
Query: 572 LDERLYHSAMNALRDAGLQMQA 593
D +++ + + A ++A
Sbjct: 302 PDAASFNALIEGMSHANRAIEA 323
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 148/345 (42%), Gaps = 38/345 (11%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++++M G D M+ +K GD EK A+F + K P Y IL
Sbjct: 11 IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGF--LP-DVRSYSILIH 67
Query: 268 SLGKSGRAFEALKFFRDMKEKGILED---------------------------------P 294
L K+G+A E F MK++G D P
Sbjct: 68 GLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPP 127
Query: 295 SI--YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
++ Y S+I A I + A LF+EA+ KG+ + V L+ + + G +++ ++
Sbjct: 128 TVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLIL 187
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
E M L + ++++ K A+ ++ + C P TY+ +IN CR+
Sbjct: 188 EEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRV 247
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
Y+KA + EMQ++G VV Y++M++ K G I DA L + KA G P+ +
Sbjct: 248 QKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASF 307
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
N+L++ A + +++E R + + +++ A N+A
Sbjct: 308 NALIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLDALNKA 352
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 154/374 (41%), Gaps = 37/374 (9%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P+ + L + + ++ + ++ ED K Y LPD + S L+ +A + +
Sbjct: 21 QPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQAR---- 76
Query: 174 LLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
T ++ MK G LD+ Y +++ + K
Sbjct: 77 ------------------------------ETSSIFHAMKQRGFALDARAYNAVVDGFCK 106
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G KV + + K+ P + Y + D L K R EA F + K KGI +
Sbjct: 107 SG---KVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELN 163
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+Y+SLI F + + A + +E +KG+ + L+ ++ + + L +
Sbjct: 164 VIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQ 223
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
SMK K + ++NG + + Y A ++++ QG +P VTY ++I+ ++
Sbjct: 224 SMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVG 283
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ A +F + G ++++++ R +A + + + +GC NV
Sbjct: 284 NITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVKACI 343
Query: 474 SLMDMHGRAKNLRQ 487
SL+D +A+ + Q
Sbjct: 344 SLLDALNKAECIEQ 357
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 115/253 (45%), Gaps = 6/253 (2%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+PD + + +HG+ K Q +E + ++ A K F + ++ +S K D
Sbjct: 56 LPDVRSYSILIHGLTKAGQARETSSIFH--AMKQRGFALDARAYNAVVDGFCKSGKVDKA 113
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
E+ K+ +V P T ++ + + A L + + G E+ ++ ++S + G
Sbjct: 114 YEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDG 173
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K+ L+ E+M G+ + + +M+A K + + F K K +
Sbjct: 174 FGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMK--CS 231
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P +T+ Y IL + L + + +A F+++M+++G++ + Y ++I A + + A
Sbjct: 232 P-NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACS 290
Query: 316 LFKEAEEKGMLRD 328
LF+ + G + D
Sbjct: 291 LFERFKANGGIPD 303
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 196/473 (41%), Gaps = 45/473 (9%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +LI L Q ++ D L ++ + PDA + L+A + K A +
Sbjct: 90 PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNV 149
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L++ + + ++ + S + G + + + EKMK +G+ D+ Y ++ K
Sbjct: 150 LKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCK 209
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
E+V+ L E + FS Y + L +SG+ EA K M EK D
Sbjct: 210 QNQLEEVSKLLEEMVEAGREPDTFS---YNTVVACLCESGKYEEAGKILEKMIEKKCGPD 266
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y SL+ F ++++ AE L ++ + C V+ Y
Sbjct: 267 VVTYNSLMDGFCKVSKMDEAERLLEDMVGR-------RCAPTVITYT------------- 306
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
++ GFS+ A +V E + G P VTY +++ C+
Sbjct: 307 ---------------TLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAG 351
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+A ++ M +K VV YS +V K G++ DA L+ M +GC+PN+ +N
Sbjct: 352 KLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFN 411
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+++D +A + + K+ + M+ TPD V+Y+T+I Y +A + + F +
Sbjct: 412 TMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKAN------RMQDAFAIL 465
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
G D+A M+ ++EE +++ M +G Y + L D
Sbjct: 466 GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCD 518
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 116/542 (21%), Positives = 225/542 (41%), Gaps = 33/542 (6%)
Query: 52 RFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLP 111
+ +++A+ N + L R + VPD + S + G QT L +EA+KL
Sbjct: 139 KMGKIDAARNVLKMMLER-----SCVPDVITYTSLIVGCC---QTNAL-----DEARKLM 185
Query: 112 E------FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
E P+ L+ L + + + + L E+ PD + + +VA +
Sbjct: 186 EKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES 245
Query: 166 RKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
K++ A +L+ I ++ +NS M G+ K+ + E M Y
Sbjct: 246 GKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITY 305
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
++ + + D A +E + S T Y L D L K+G+ EA +
Sbjct: 306 TTLIGGFSR-ADRLADAYRVMEDMFKAGISPDLVT--YNCLLDGLCKAGKLEEAHELLEV 362
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M EK D Y+ L+ + +V A L + E+G + ++ + + G
Sbjct: 363 MVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGK 422
Query: 345 VEKTLDVVESMKNAKLKISDCISCA--IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
V++ V+E MK +SC +V + GY A ++ + G P + +Y
Sbjct: 423 VDEGHKVLELMKE--------VSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASY 474
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+S++ C +A++V M ++G Y+ ++ R +A+ ++ M
Sbjct: 475 SSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSE 534
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
+GCEPN++ Y+ L++ + K + + M + PD +YT++I + + + D
Sbjct: 535 RGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDA 594
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ + R +G D+ I++ F + +E+ ++++Q M +G D Y S M
Sbjct: 595 AYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMR 654
Query: 583 AL 584
+L
Sbjct: 655 SL 656
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 162/362 (44%), Gaps = 5/362 (1%)
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
I++AY +IGD ++ + F K+ +P + Y IL L + R EA + +M
Sbjct: 65 ILKAYCQIGDLDRALSHF----RGKMWCSP-TAFTYCILIHGLCQCQRIDEAYQLLDEMI 119
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
+K D ++Y LI + ++ A + K E+ + D L++ + ++
Sbjct: 120 QKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALD 179
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ ++E MK + L A++NG K+ K+ E+++ G P +Y +++
Sbjct: 180 EARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVV 239
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
C Y +A K+ +M +K VV Y+S++ + K ++ +A L+ M + C
Sbjct: 240 ACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCA 299
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P V Y +L+ RA L ++ ++M + ++PD V+Y ++ +A + + +
Sbjct: 300 PTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHEL 359
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
D I+V KL ++++ LL+ M G + + +++ ++
Sbjct: 360 LEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCK 419
Query: 587 AG 588
AG
Sbjct: 420 AG 421
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 107/223 (47%), Gaps = 8/223 (3%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
A++ GFS+ +++ +++++ P +T+ +I+ AYC+I +A F +
Sbjct: 29 ALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHF-----R 83
Query: 429 GFDKC-VVAYSSMVAMYG--KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
G C A++ + ++G + RI +A L+ +M K C P+ +YN L+ + +
Sbjct: 84 GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKI 143
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ K M R PD ++YT++I + D K + + +G D +
Sbjct: 144 DAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNAL 203
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ K +Q+EE+ KLL++M G + D Y++ + L ++G
Sbjct: 204 LNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESG 246
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%)
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
C P TY +I+ C+ +A ++ EM QK Y+ ++A K G+I A
Sbjct: 88 CSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAAR 147
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
++ M + C P+V Y SL+ + L + KL ++M+ +TPD V+Y +++
Sbjct: 148 NVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGL 207
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ + + K E G D +V + + EE K+L+ M + D
Sbjct: 208 CKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDV 267
Query: 575 RLYHSAMNALRDAGLQMQAQWLQQNFEG 602
Y+S M+ +A+ L ++ G
Sbjct: 268 VTYNSLMDGFCKVSKMDEAERLLEDMVG 295
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 150/316 (47%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+T+ Y L SL ++ R EA FR M +G + Y+ LI +V A EL
Sbjct: 51 NTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELL 110
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E + G + L+ + G +++ +D+ M + +++GFSK+
Sbjct: 111 NEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKK 170
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A +++E+++ +GCIP TY S+++ + R + + + +F +M ++G + +
Sbjct: 171 GDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTF 230
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++++ + K G + +A L +M++ GC P+V YN+LM + ++L +EM R
Sbjct: 231 NNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIR 290
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
V PD VSY +I Y+++ D +K + E +G D ++ + ++
Sbjct: 291 SGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGA 350
Query: 558 LVKLLQDMKSEGTKLD 573
+ +DM + G+ D
Sbjct: 351 AFVVFKDMIANGSAPD 366
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 167/357 (46%), Gaps = 3/357 (0%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
Y M AG V ++ Y ++ + + E+ ++F ++ FS Y IL
Sbjct: 40 YNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFS---YSILIAG 96
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L + + EA + +M + G + Y SL+ + ++K A +LF +G D
Sbjct: 97 LCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPD 156
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
V L+ + ++G + + + E M + ++++GFS++ + +++
Sbjct: 157 GVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFK 216
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ QGC+P T+ ++++ +C++ +A ++F+EM+ G VV+Y++++ G
Sbjct: 217 DMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKG 276
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ +A L+ +M G P++ YN L+D + ++ L KL+ E+ + + PD SY+
Sbjct: 277 KPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYS 336
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
T+I RA + + + NG D A+ +V + ++ E +L Q M
Sbjct: 337 TIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 107/217 (49%)
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A V+ + +QGC P +Y+ +I CR +A ++ EM G VV Y S
Sbjct: 68 FEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGS 127
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
+++ K G++++A+ L ++M +GC P+ +YN L+D + ++ + +L++EM +
Sbjct: 128 LLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKG 187
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
P +Y +++S ++R EF + + G V + ++ F K+ + E
Sbjct: 188 CIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAH 247
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+L +M+S G D Y++ M + G +AQ L
Sbjct: 248 RLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRL 284
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 160/391 (40%), Gaps = 6/391 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T L+R L Q+++++ S+ P+ + S L+A R +K A L
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L I G + ++ + S + G K+ + ++ +M G D Y +++ + K
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
GD + LF E + T F+ Y L + G F+DM +G + +
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFT---YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ +L+ F + ++ A LF E G D L+ +G + ++
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLR 286
Query: 354 SMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
M + + D +S I ++G+SK A+K++ ++ G P +Y++II+ CR
Sbjct: 287 EMIRSGVG-PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
A VF +M G +V + R+ ++ L M C P + Y
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
N LM +AK V +++ E+ R +PD
Sbjct: 406 NLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/425 (19%), Positives = 175/425 (41%), Gaps = 4/425 (0%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
L+ L +S + D + D +P+ +T L+ S +A++F+ A ++ + G
Sbjct: 23 LLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ +++ + G + + +M G + Y ++ K+G ++
Sbjct: 83 CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF R P +Y +L D K G EA + F +M EKG + Y SL+
Sbjct: 143 DLFSRMVYR---GCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
F+ E + LFK+ +G + + L+ + + G + + + M++
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
++ G + A ++ ++I G P V+Y +I+ Y + A K+
Sbjct: 260 PDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F E+ + G + +YS+++ + G++ A + M A G P+ + L+ R
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCR 379
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L + +L++ M + + P Y ++ +A+ D + ++E G D I
Sbjct: 380 GERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEI 439
Query: 542 AGIMV 546
+ +++
Sbjct: 440 SKVIL 444
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 81/210 (38%), Gaps = 35/210 (16%)
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
Y ++ GC+P TY ++ + C+ + +A VF
Sbjct: 40 YNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF------------------------ 75
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
M A+GC PNV+ Y+ L+ R + + + +L EM P+ V+
Sbjct: 76 -----------RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVT 124
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y +++S + + V ++ G D + +++ FSK + E +L ++M
Sbjct: 125 YGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEML 184
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+G Y+S ++ G + Q L
Sbjct: 185 EKGCIPTVFTYNSLLSGFSRKGEFGRVQSL 214
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 73/170 (42%)
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
Q ++ ++Y+ ++ + K+GR M GC PN + Y L+ +A+
Sbjct: 10 QVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFE 69
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ +++ M + +P+ SY+ +I+ R ++ D + NE G + G ++
Sbjct: 70 EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
K+ +++E V L M G D +Y+ ++ G +A L
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRL 179
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 150/319 (47%)
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L L K+G EA++ + M E+G + D Y +LI +V+ +L E ++G
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ D L+ G +++ +++ K+ L + +++G+ K
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 616
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
K++ +L++Q V Y ++I AYCR +A K+ +M+ KG YSS++
Sbjct: 617 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 676
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
GR+ DA L+ +M+ +G PNV Y +L+ + + + +V + +EM + P+K
Sbjct: 677 CNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNK 736
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
++YT +I Y+++ + K +E G V D ++ F K +IEE K+
Sbjct: 737 ITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDY 796
Query: 565 MKSEGTKLDERLYHSAMNA 583
M EG LDE Y + ++
Sbjct: 797 MSQEGLPLDEITYTTLVHG 815
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 118/552 (21%), Positives = 217/552 (39%), Gaps = 35/552 (6%)
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
++ Q PD F + ++ K + ++ A + + +KL P T LI L +
Sbjct: 236 ETMRQGVSPDVYLFSTAINAFCKGGKVED-AIQLFFDMEKL-GVSPNVVTYNNLIHGLCK 293
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLA 188
D E V T S L+ ++ KF AN++L+ + G +
Sbjct: 294 HGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVV 353
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N+ + GY K+ + + M S GI +S I++ + KIG E+ + E
Sbjct: 354 YNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEML 413
Query: 249 SRKLDSTP--FSTHMY------------------------------KILCDSLGKSGRAF 276
SR P F+T ++ L L K G+
Sbjct: 414 SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHS 473
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+A++ + + EKG + +LI ++ A L K+ E+G + D L+
Sbjct: 474 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 533
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+EG VE+ + M ++ +++G + AV ++ + S+ +
Sbjct: 534 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLV 593
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P TY +I+ YC+ + EK+F E+ + + V Y++++ Y + G +A L
Sbjct: 594 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 653
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
M++KG P Y+SL+ + + L EM + + P+ V YT +I Y +
Sbjct: 654 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCK 713
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ D V E ++ +M+ +SK ++ KLL +M +G D
Sbjct: 714 LGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVT 773
Query: 577 YHSAMNALRDAG 588
Y+ N G
Sbjct: 774 YNVLTNGFCKEG 785
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 206/486 (42%), Gaps = 11/486 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T L+ LV++ + + + E + V PD + S + + + K + A
Sbjct: 210 PTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDA--- 265
Query: 175 LQVFITDGEIAL----LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+Q+F ++ + + +N+ + G K EKM G+ Y ++
Sbjct: 266 IQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLING 325
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K+ + ++ E + TP +Y L D K G +AL+ DM KGI
Sbjct: 326 LMKLEKFNEANSVLKETLEKGF--TPNEV-VYNTLIDGYCKMGNLGDALRIRGDMVSKGI 382
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
+ S+I F I +++ AE + +E +G +P ++ E L
Sbjct: 383 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 442
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ M ++ +D + +V G K + AV+++ +L+ +G VT ++I+ C
Sbjct: 443 FLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLC 502
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ +A ++ +M ++GF + Y+++++ K G++ + L +M +G EP+ +
Sbjct: 503 KTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 562
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YN L+ R L + LW E + R + P+ +Y +I Y +A + + K + E
Sbjct: 563 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 622
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
++ + ++ + + E KL DM+S+G Y S ++ + + G
Sbjct: 623 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 682
Query: 591 MQAQWL 596
A+ L
Sbjct: 683 EDAKCL 688
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/441 (19%), Positives = 185/441 (41%), Gaps = 6/441 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P++ +S + G K Q ++ + E F +I +L + +++S +
Sbjct: 384 PNSVTLNSIIQGFCKIGQMEQ--AECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 441
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+ + N+ P+ + LV + K A L + G A L+ N+ + G
Sbjct: 442 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGL 501
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K + + +KM G VLD Y ++ K G E+ L E + ++
Sbjct: 502 CKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDT 561
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
F+ Y +L + + G+ EA+ + + K + ++ + Y +I + +++ E+L
Sbjct: 562 FT---YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 618
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F E + + + V L+ Y G + + + M++ + + ++++G
Sbjct: 619 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN 678
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A + +++ +G +P V Y ++I YC++ K V EM +
Sbjct: 679 IGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKIT 738
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y+ M+ Y K+G ++ A L+ +M KG P+ YN L + + + + K+ M
Sbjct: 739 YTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMS 798
Query: 497 RRKVTPDKVSYTTVISAYNRA 517
+ + D+++YTT++ + +
Sbjct: 799 QEGLPLDEITYTTLVHGWQQP 819
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/360 (19%), Positives = 143/360 (39%), Gaps = 74/360 (20%)
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA----------------- 358
+F+ KG+ + C L+ ++ +EK+ V E+M+
Sbjct: 199 VFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCK 258
Query: 359 ---------------KLKISDCISC--AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
KL +S + +++G K A + E+++ G +T
Sbjct: 259 GGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLIT 318
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y+ +IN ++ +++A V E +KGF V Y++++ Y K G + DA+ + M
Sbjct: 319 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 378
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
+KG PN NS++ + + Q E + +EM R + + ++TT+I F+
Sbjct: 379 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 438
Query: 522 MCVKFYNE-----FRMNGGVIDRAIAGI------------------------------MV 546
++F E R N G++ + G+ ++
Sbjct: 439 SALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI 498
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL-----RDAGLQMQAQWLQQNFE 601
K ++E V+LL+ M G LD+ Y++ ++ + G +++ + ++Q E
Sbjct: 499 HGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE 558
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/480 (20%), Positives = 199/480 (41%), Gaps = 39/480 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
PE TL L+ L++ +K+ ++ L ++ V PD +TCS +V S + F A
Sbjct: 188 PEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEK 247
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
++ +G +++++ +N + G K + V + G+ D YC ++ + +
Sbjct: 248 IRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCR 307
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ E A + L + +L +P + L D L K G+ +A + + G + +
Sbjct: 308 LQQFE--AGIQLMDEMVELGFSPTEAAVSG-LVDGLRKQGKIDDAYELVVKVGRFGFVPN 364
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+Y +LI S ++ AE L+
Sbjct: 365 LFVYNALINSLCKGGDLDKAELLY-----------------------------------S 389
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+M L+ + +++ F + A+ ++++I G Y S+IN C+
Sbjct: 390 NMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFG 449
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
S AE +FIEM KG + ++S+++ Y K +++ A L KM G PNV+ +
Sbjct: 450 DLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFT 509
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+L+ + + +L+ E+ RK+ P +V+Y +I Y R + D + +
Sbjct: 510 ALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQK 569
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G V D ++ ++ + + D+ + KL+E Y + ++ G M+A
Sbjct: 570 GLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEA 629
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/536 (19%), Positives = 210/536 (39%), Gaps = 44/536 (8%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VP+ +++ ++ + K + Y N + L RP T +LI +S + D
Sbjct: 362 VPNLFVYNALINSLCKGGDLDKAELLYSNMS--LMNLRPNGITYSILIDSFCRSGRLDVA 419
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+S + + + + L+ + A +L G E F S + G
Sbjct: 420 ISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISG 479
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
Y K +Y KM GI + + ++ + + LF E RK+ T
Sbjct: 480 YCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPT 539
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y +L + + G+ +A + DM +KG++ D Y LI S V A++
Sbjct: 540 EVT---YNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKD 596
Query: 316 LFKEAEEKGMLRDPEVCLKLVLM-YIEEG--------------------------LVEKT 348
+ ++ ++ E+C +L Y +EG L++
Sbjct: 597 FIDDLHKQN-VKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGA 655
Query: 349 L---------DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
L D+++ M + L+ + I ++++ +SK + A + ++ ++++ C P
Sbjct: 656 LKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNV 715
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
VTY +++N C+ +A +F MQ + Y + K G +++A+ L
Sbjct: 716 VTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHA 775
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M KG N +N ++ + + K+ EM + PD V+Y+T+I Y R+
Sbjct: 776 M-LKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGN 834
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
VK ++ G D +++ ++++ +L DM G D +
Sbjct: 835 VGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNK 890
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 128/277 (46%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
ST + +L + S R F+A+ + M +L + ++L+ + + ELF
Sbjct: 154 STLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELF 213
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E+ G+ DP C +V E + + + M+ +S +++G K
Sbjct: 214 DESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKG 273
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
AV+V L +G VTY +++ +CR+ + ++ EM + GF A
Sbjct: 274 DRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAV 333
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
S +V K G+I DA LV K+ G PN+++YN+L++ + +L + E L+ M
Sbjct: 334 SGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSL 393
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+ P+ ++Y+ +I ++ R+ D+ + +++ +G
Sbjct: 394 MNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDG 430
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/455 (20%), Positives = 180/455 (39%), Gaps = 81/455 (17%)
Query: 84 DSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDF 143
+S LH +L + + ++ ++ K +F L+ Y++ S+ +D++V + F
Sbjct: 123 NSLLHTLLLRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMF 182
Query: 144 KIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYY 203
N+LP+ T S L+ ++ RKF IT E+
Sbjct: 183 A-NNLLPEVRTLSALLNGLLKVRKF----------ITVWEL------------------- 212
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS--RKLDSTPF--ST 259
+++ +AG+ D ++ + ++ D FL K R +++ F S
Sbjct: 213 -----FDESVNAGVRPDPYTCSAVVRSMCELKD-------FLRAKEKIRWMEANGFDLSI 260
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
Y +L L K R EA++ R + KG+ D Y +L+ F + + + +L E
Sbjct: 261 VTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDE 320
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
E G ++ +V+G K+
Sbjct: 321 MVELG-----------------------------------FSPTEAAVSGLVDGLRKQGK 345
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A ++ ++ G +P Y ++IN+ C+ KAE ++ M + YS
Sbjct: 346 IDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSI 405
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ + ++GR+ A+ +M G V+ YNSL++ + +L E L+ EM +
Sbjct: 406 LIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKG 465
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
V P ++T++IS Y + + K YN+ NG
Sbjct: 466 VEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNG 500
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/232 (18%), Positives = 104/232 (44%), Gaps = 37/232 (15%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
A++NG K R + +++++ ++ G P T ++++ + C + + +A++ M+
Sbjct: 195 ALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEAN 254
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
GFD +V Y+ ++ K R+ +A+ + + KG
Sbjct: 255 GFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKG------------------------ 290
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF-RMNGGVIDRAIAGIMVG 547
+ D V+Y T++ + R ++F+ ++ +E + + A++G++ G
Sbjct: 291 -----------LAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDG 339
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
+ K +I++ +L+ + G + +Y++ +N+L G +A+ L N
Sbjct: 340 L-RKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSN 390
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 205/459 (44%), Gaps = 8/459 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP + + + K++ ++VSL ++ V + ++ + L+ R A +
Sbjct: 89 RPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAIS 148
Query: 174 LL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+L ++F + + FN+ + G + ++ +M G D Y ++
Sbjct: 149 VLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLC 208
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K G++ L RK++ ++ Y + DSL K +A+ +M ++GI
Sbjct: 209 KSGNTSMALQLL-----RKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGI 263
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
D Y++++ F S+ + A LF E + ++ + LV +EG+V +
Sbjct: 264 PPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARC 323
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
V E+M + + A+++G+ A KV + ++ +GC P +Y +IN YC
Sbjct: 324 VFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYC 383
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ +A+ + +EM +K V YS+++ + GR ++A+ L +M + G P++
Sbjct: 384 KRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLM 443
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
Y++L+D + +L + KL K M+ K+ PD V Y +I A + ++ + +++
Sbjct: 444 TYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKL 503
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+G IM+ K +E +L + M+ +G
Sbjct: 504 FADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDG 542
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 181/411 (44%), Gaps = 17/411 (4%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS-------GCYCQIMEAYYKIGDS 237
+++ F +G K Y + + + +M G+ + C C++ + I
Sbjct: 91 SVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVL 150
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
K+ L ++ D+ F+T L + G EA+ F +M +G D Y
Sbjct: 151 GKMFKLGIQP-----DAITFNT-----LINGRCIEGEIKEAVGLFNEMVRRGHQPDVISY 200
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
+++I +A +L ++ EEKG + ++ ++ LV +D++ M +
Sbjct: 201 STVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVD 260
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ I++GF A ++ +++ + +P VT+ +++ C+ + S+
Sbjct: 261 RGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSE 320
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A VF M +KG + Y++++ Y ++ +A ++ M KGC P V YN L++
Sbjct: 321 ARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILIN 380
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ + + L + + L EM +++TPD V+Y+T++ + + + E +G +
Sbjct: 381 GYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLP 440
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
D ++ K ++E +KLL+ M+ + D LY+ + + AG
Sbjct: 441 DLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAG 491
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 170/402 (42%), Gaps = 4/402 (0%)
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
H+ ++ I V KM GI D+ + ++ G+ ++ LF E R S
Sbjct: 142 HVVFA-ISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVIS- 199
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
Y + + L KSG AL+ R M+EKG + Y ++I S T V A +L E
Sbjct: 200 --YSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSE 257
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
++G+ D ++ + G + + + M + + +V+G K
Sbjct: 258 MVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGM 317
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A V+E + +G P TY ++++ YC +A+KV M KG V +Y+
Sbjct: 318 VSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNI 377
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ Y K R+ +A L+ +M K P+ Y++LM + ++ L+KEM
Sbjct: 378 LINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSG 437
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ PD ++Y+T++ + D +K + + D + I++ ++E
Sbjct: 438 LLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAK 497
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+L + ++G + R Y + L GL +A L + E
Sbjct: 498 ELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKME 539
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/422 (19%), Positives = 169/422 (40%), Gaps = 20/422 (4%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE--FRPEKSTLKLL 123
E+ R H PD + + ++G+ K T +A +K+ E +P +
Sbjct: 187 EMVRRGHQ----PDVISYSTVINGLCKSGNTS-MALQLL---RKMEEKGCKPNLVAYTTI 238
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE 183
I L + + + L + + PD T S ++ A L +
Sbjct: 239 IDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNV 298
Query: 184 IA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY---YKIGDSEK 239
+ + F + G K M V+E M G ++ Y +M+ Y ++ +++K
Sbjct: 299 MPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQK 358
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
V + ++ + H Y IL + K R EA +M EK + D Y++
Sbjct: 359 VLDIMVDKGCAPV------VHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYST 412
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
L+ + + A LFKE G+L D L+ + G +++ L +++SM+ +K
Sbjct: 413 LMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESK 472
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
++ + ++ G A +++ +L + G P TY +I + L +A
Sbjct: 473 IEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAY 532
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
++F +M+ GF +Y+ ++ + + A+ L+ +M K + + L+D+
Sbjct: 533 ELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLE 592
Query: 480 GR 481
R
Sbjct: 593 SR 594
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/454 (18%), Positives = 186/454 (40%), Gaps = 43/454 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PDA F++ ++G + + +E A +NE + +P+ + +I L +S +
Sbjct: 160 PDAITFNTLINGRCIEGEIKE-AVGLFNEMVRRGH-QPDVISYSTVINGLCKSGNTSMAL 217
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L + P+ + ++ S + A LL + G ++ +++ + G+
Sbjct: 218 QLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGF 277
Query: 197 NKL-HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
L H+ +TIL + +M ++ ++ + +++ K G + +F E ++K +
Sbjct: 278 CSLGHLNEATIL-FNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVF-EAMTKK-GAE 334
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P + + Y L D + + EA K M +KG Y LI + + A+
Sbjct: 335 P-NAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKS 393
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L E EK E T D V ++ G
Sbjct: 394 LLVEMSEK----------------------ELTPDTV-------------TYSTLMQGLC 418
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ A+ +++++ S G +P +TY+++++ C+ +A K+ MQ+ + +V
Sbjct: 419 QVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIV 478
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+ ++ G++ A L +K+ A G +P + Y ++ + + +L+++M
Sbjct: 479 LYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKM 538
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
E P+ SY +I + + ++ ++ +E
Sbjct: 539 EDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDE 572
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 83/200 (41%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P V + + + + YS + +M G V + + ++ + + A+ +
Sbjct: 90 PSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISV 149
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ KM G +P+ +N+L++ +++ L+ EM RR PD +SY+TVI+ +
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCK 209
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ M ++ + G + ++ K + + + + LL +M G D
Sbjct: 210 SGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVT 269
Query: 577 YHSAMNALRDAGLQMQAQWL 596
Y + ++ G +A L
Sbjct: 270 YSTILHGFCSLGHLNEATIL 289
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 190/415 (45%), Gaps = 38/415 (9%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ +N+ + GY K ++ ++K G + Y I+ + K GD + + L +
Sbjct: 239 IIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLM 298
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E SR L + +Y + D+ K G +A++ M E G D Y +LI
Sbjct: 299 EMNSRGL---TVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSC 355
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG--------LVEKT--------- 348
+V A++L ++A KG++ + L+ Y ++G L+E T
Sbjct: 356 RDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLV 415
Query: 349 --------------LDVVESMKNAKLKISDCISCAIVN----GFSKRRGYWAAVKVYEQL 390
+DV +++ L+ I N G K+ AA + ++
Sbjct: 416 TYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEM 475
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+ Q +P YA++++ + R +A K+F +KG + +V Y++M+ Y K G +
Sbjct: 476 LDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMM 535
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
+DAM + +MK + P+ + Y++++D + + +L +K+++EM + K P+ V+YT++
Sbjct: 536 KDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSL 595
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
I+ + R + +K + E + G V + I++G F K +++ + ++M
Sbjct: 596 INGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEM 650
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 139/325 (42%), Gaps = 6/325 (1%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L D K G A F ++K KG L Y ++I F + K + L E
Sbjct: 242 YNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMN 301
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+G+ + +V ++ + G + K ++ +E M K +++G +
Sbjct: 302 SRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVS 361
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A ++ EQ + +G +P + +Y +I+AYC+ Y +A IEM ++G +V Y ++V
Sbjct: 362 EADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALV 421
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
G + A+ + KM +G P+ IYN LM + L + L EM + V
Sbjct: 422 HGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVL 481
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYN---EFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
PD Y T++ + R D K + E MN G++ M+ + K +++
Sbjct: 482 PDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGY---NAMIKGYCKFGMMKDA 538
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNA 583
+ + MK DE Y + ++
Sbjct: 539 MACINRMKKRHLAPDEFTYSTVIDG 563
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 103/216 (47%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++G+ K+ A ++ +L +G +P TY +IIN +C+ + +++ +EM +
Sbjct: 244 TLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSR 303
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G V Y++++ K G I A+ + M GC+P++ YN+L+ R + +
Sbjct: 304 GLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEA 363
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
++L ++ + + P+K SYT +I AY + +D + E G D G +V
Sbjct: 364 DQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHG 423
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+++ + + + M G D +Y+ M+ L
Sbjct: 424 LVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGL 459
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/457 (19%), Positives = 185/457 (40%), Gaps = 30/457 (6%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ + G +D + E D E P K + LI + +D
Sbjct: 342 PDIVTYNTLISGSCRDGKVSEA--DQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRAS 399
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA-FNSAMGGY 196
+ + PD T LV V A + +A T+ + + G +N M G
Sbjct: 400 NWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGL 459
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K + L+ +M ++ D+ Y +++ + + G+ ++ LF + ++
Sbjct: 460 CKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGI 519
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y + K G +A+ MK++ + D Y+++I + ++ A+++
Sbjct: 520 VG---YNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKM 576
Query: 317 FKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
F+E + M P V L+ + +G + ++L + M+ L + ++ F
Sbjct: 577 FREMVK--MKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSF 634
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK-------------- 420
K A +E+++ C+P VT+ ++N + + + +EK
Sbjct: 635 CKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLN 694
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD--- 477
F M G+ AY+S++ + G R A+ L KM +KGC P+ + +L+
Sbjct: 695 FFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVC 754
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ GR+K + + + R++ V+Y++++ Y
Sbjct: 755 LEGRSKEWKNIVSC--NLNERELQI-AVNYSSILDQY 788
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 96/207 (46%), Gaps = 5/207 (2%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQ--KGFDKCVVAYSSMVAMYG--KTGRIRD 452
P + S++N ++ A K++ EM + D+CV YS+ + + G K G++ +
Sbjct: 163 PDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEE 222
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
L+ +GC PN+ YN+L+D + + ++ L+ E++ + P +Y +I+
Sbjct: 223 GRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIIN 282
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ + +F + E G ++ + ++ K I + V+ ++ M G K
Sbjct: 283 GFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKP 342
Query: 573 DERLYHSAMN-ALRDAGLQMQAQWLQQ 598
D Y++ ++ + RD + Q L+Q
Sbjct: 343 DIVTYNTLISGSCRDGKVSEADQLLEQ 369
>gi|357491817|ref|XP_003616196.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517531|gb|AES99154.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 981
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 189/442 (42%), Gaps = 46/442 (10%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N+ + Y K V+ M +G+ +D+ + ++ G+ + +L + +
Sbjct: 296 YNTLIDLYGKAGRLKDAADVFADMMKSGVAMDTCTFNTLIFISGSHGNLLEAESLLDKME 355
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
R + S +T Y I +G AL ++R ++E G+ D Y +L+ + +
Sbjct: 356 ERGISS---NTRTYNIFLSLYATAGSIDAALSYYRRIREVGLFPDTVTYRALLGALCTEN 412
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
V+ E + E E+ + D +V MYI EG V+K D+++ I
Sbjct: 413 MVQAVEGVIDEMEKNSVSLDALSLSGIVKMYINEGDVDKANDLLQKYGEP----PSFICA 468
Query: 369 AIVNGFSKRRGYWA-------------------------------------AVKVYEQLI 391
AI++ F+++ G+WA AV ++E++
Sbjct: 469 AIIDAFAEK-GFWAEAENIFYRKRDKARQARDILEFNVMIKAYGKANHYDKAVLLFEEMK 527
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
QG P TY SII L +A + +EMQ+ GF +S+++ Y + G++
Sbjct: 528 YQGISPADSTYNSIIQMLSGADLVDQARDLTVEMQEMGFKPHCQTFSAVIGCYARLGQLS 587
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
DA+ + +M + G +PN +Y +L++ L + + + M+ ++ + V TT++
Sbjct: 588 DAVIVYQEMISAGVKPNETVYGALINGFAEHGRLDEALQYFHLMQESGLSANLVVLTTLM 647
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+Y++A + Y + + GV+D A M+ F++L + E + K G +
Sbjct: 648 KSYSKAGDLKGVKSIYKQMQNMEGVLDLAARSSMITAFAELGLVSEAKLTFEKFKETG-Q 706
Query: 572 LDERLYHSAMNALRDAGLQMQA 593
D Y M +D G+ +A
Sbjct: 707 ADSTSYGIMMYVYKDIGMIDEA 728
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 93/460 (20%), Positives = 189/460 (41%), Gaps = 72/460 (15%)
Query: 102 DYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS 161
D +A+ + EF ++I+ ++ +D V L E+ K + P T + ++
Sbjct: 492 DKARQARDILEFN-------VMIKAYGKANHYDKAVLLFEEMKYQGISPADSTYNSIIQM 544
Query: 162 CVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD 220
A A L G + F++ +G Y +L ++VY++M SAG+ +
Sbjct: 545 LSGADLVDQARDLTVEMQEMGFKPHCQTFSAVIGCYARLGQLSDAVIVYQEMISAGVKPN 604
Query: 221 SGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALK 280
Y ++ + + G ++ F + L + + L S K+G
Sbjct: 605 ETVYGALINGFAEHGRLDEALQYFHLMQESGLSANLV---VLTTLMKSYSKAGDLKGVKS 661
Query: 281 FFRDMKE-KGILEDPSIYASLICSFAS---ITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
++ M+ +G+L D + +S+I +FA ++E KL E FKE + D ++
Sbjct: 662 IYKQMQNMEGVL-DLAARSSMITAFAELGLVSEAKLTFEKFKETGQA----DSTSYGIMM 716
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCIS------CAIVNGFSKRRGYWAAVKVYEQL 390
+Y + G++++ + + E MK + L + DC+S C +N R+ + +YE +
Sbjct: 717 YVYKDIGMIDEAIKIAEEMKISGL-LRDCVSYNRVLTCYAIN----RQFHKCGELLYEMI 771
Query: 391 ISQGCIP------------------------------------GQVTYASIINAYCRIAL 414
+S+ +P Q TY ++ Y + +
Sbjct: 772 VSKKLLPDDGTLIVLFTILKKAEFPVEAAEQLELCYQEGKPYASQATYTAL---YSLLGM 828
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
++ A K F + + D AY+ + Y G + A+ + KM+ K EP++ Y +
Sbjct: 829 HTLALK-FAQTVLENLDSSA-AYNVAIYAYASAGDVEKALNIHMKMRDKHVEPDIVTYIN 886
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L+ +G+A + V+K+ E ++ + + + AY
Sbjct: 887 LVGCYGKAGMVEGVKKIHSLFEYGEIERSESLFKAIKDAY 926
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 54/114 (47%)
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
TY ++I+ Y + A VF +M + G +++++ + G G + +A L+ K
Sbjct: 294 TTYNTLIDLYGKAGRLKDAADVFADMMKSGVAMDTCTFNTLIFISGSHGNLLEAESLLDK 353
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
M+ +G N YN + ++ A ++ ++ + + PD V+Y ++ A
Sbjct: 354 MEERGISSNTRTYNIFLSLYATAGSIDAALSYYRRIREVGLFPDTVTYRALLGA 407
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 112/536 (20%), Positives = 220/536 (41%), Gaps = 74/536 (13%)
Query: 76 AVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
+P A+ ++FLH + K + +L+ D++ + P T ++I ++ + +
Sbjct: 93 VLPKARSCNAFLHRLSKAGEG-DLSRDFFRDMVG-AGIAPTVFTYNIMIGHVCKEGDMLT 150
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGG 195
SL E K + PD ++ +N+ + G
Sbjct: 151 ARSLFEQMKKMGLTPD----------------------------------IVTYNTLIDG 176
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
Y K+ + ++ ++E+MK G D Y ++ ++ K + F E K + L
Sbjct: 177 YGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPN 236
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---CSFASITEVKL 312
S Y L D+L K G A+KFF DM G+L + Y+SLI C ++ E +
Sbjct: 237 VIS---YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFM 293
Query: 313 --------------------------------AEELFKEAEEKGMLRDPEVCLKLVLMYI 340
AEELF+ + G+ + + L+ +I
Sbjct: 294 LADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHI 353
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ ++K +++ M+ +K + IV G + ++ G V
Sbjct: 354 KVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPV 413
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
Y ++++AY + ++A + EM+ G + VV + +++ K G +++A++ +M
Sbjct: 414 IYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRM 473
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+PNV +Y +L+D + + +KL+ EM+ + + PDK++YT +I + F
Sbjct: 474 PDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNF 533
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ N+ G +D +V S+ Q+++ K L +M +G DE L
Sbjct: 534 QEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETL 589
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 156/325 (48%)
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L K+G + FFRDM GI Y +I ++ A LF++ ++ G+ D
Sbjct: 107 LSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPD 166
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ Y + GL+++++ + E MK + A++N F K +G A + +
Sbjct: 167 IVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFR 226
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ + P ++Y+++I+A C+ + A K F++M + G YSS++ K G
Sbjct: 227 EMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAG 286
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ +A L +M + + N+ Y +L+D + + E+L++ M + VTP+ +YT
Sbjct: 287 NLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYT 346
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I + + R D ++ +NE R D + G +V S++EE ++ +MK
Sbjct: 347 ALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKES 406
Query: 569 GTKLDERLYHSAMNALRDAGLQMQA 593
G + +Y + M+A AG + +A
Sbjct: 407 GIGANPVIYTTLMDAYFKAGNRTEA 431
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/467 (19%), Positives = 199/467 (42%), Gaps = 59/467 (12%)
Query: 78 PDAKKFDSFLH------GMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSK 131
PD +++ ++ GML+ A++++ E K + +P + LI L +
Sbjct: 200 PDVITYNALINSFCKFKGMLR-------AFEFFREMKD-KDLKPNVISYSTLIDALCKEG 251
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA----RKFKIANTLLQVFITDGEIALL 187
+ D +LP+ T S L+ + +A F +A+ +LQ + ++ ++
Sbjct: 252 MMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHV---DLNIV 308
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+ + + G + M ++ M AG+ + Y ++ + K+
Sbjct: 309 TYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKV------------- 355
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
R +D +A++ F +M+EK I D ++ +++ S
Sbjct: 356 --RSMD-----------------------KAMELFNEMREKDIKPDILLWGTIVWGLCSE 390
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++++ + + E +E G+ +P + L+ Y + G + ++++E M++ +++
Sbjct: 391 SKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTF 450
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
CA+++G KR A+ + ++ P Y ++I+ C+ A+K+F EMQ
Sbjct: 451 CALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQD 510
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
K +AY++M+ K G ++A+ + KM G E +++ Y SL+ + ++Q
Sbjct: 511 KNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQ 570
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
K EM + + PD+ T ++ + D ++ NE G
Sbjct: 571 ARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKG 617
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 160/385 (41%), Gaps = 38/385 (9%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+ M AGI Y ++ K GD +LF + K K+ TP Y L D
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMK--KMGLTP-DIVTYNTLIDG 176
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
GK G E++ F +MK G D Y +LI SF KGMLR
Sbjct: 177 YGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKF---------------KGMLR- 220
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
+ MK+ LK + +++ K A+K +
Sbjct: 221 -------------------AFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFV 261
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+ G +P + TY+S+I+A C+ +A + EM Q+ D +V Y++++ + G
Sbjct: 262 DMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEG 321
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ +A L M G PN+ Y +L+ H + +++ + +L+ EM + + PD + +
Sbjct: 322 MMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWG 381
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
T++ + + C E + +G + I ++ + K E + LL++M+
Sbjct: 382 TIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDL 441
Query: 569 GTKLDERLYHSAMNALRDAGLQMQA 593
GT++ + + ++ L GL +A
Sbjct: 442 GTEVTVVTFCALIDGLCKRGLVQEA 466
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 105/210 (50%)
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ ++ G P TY +I C+ A +F +M++ G +V Y++++ YGK
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G + +++ L +MK GCEP+V YN+L++ + K + + + ++EM+ + + P+ +S
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y+T+I A + M +KF+ + G + + ++ K + E L +M
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
E L+ Y + ++ L + G+ +A+ L
Sbjct: 300 QEHVDLNIVTYTTLLDGLCEEGMMNEAEEL 329
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 204/453 (45%), Gaps = 9/453 (1%)
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL---LAFNS 191
SI L + ++ LP A + + S + F +LL + ++ L + S
Sbjct: 39 SISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLLHHLTQNQNPSMTTALLYES 98
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR- 250
+ + K + ++ + +M G+V + ++ + + EK F E K R
Sbjct: 99 IINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKERV 158
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
K D F M K C++ G ++F+ L +DM G+ + IY +LI ++
Sbjct: 159 KFDVYSFGI-MIKGCCEN-GNLDKSFQLLGLLQDM---GLSPNVVIYTTLIDGCCKNGDI 213
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
+ A F + E G++ + L+ ++GL + D+ E MK L + +
Sbjct: 214 ERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCL 273
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+N + A +++++ +G VTY ++I CR +AEK+ +M++
Sbjct: 274 MNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAV 333
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
++ Y++++ + G + A L+ ++K+ G P++ YN L++ + +A N + V
Sbjct: 334 SPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVAD 393
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L +EME R ++P KV+ T +I AY R +E + + Y+ G V D + G+++
Sbjct: 394 LAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLC 453
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++E KL + M + + +Y++ ++
Sbjct: 454 MKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHG 486
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/472 (20%), Positives = 202/472 (42%), Gaps = 19/472 (4%)
Query: 46 SSIINHRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYN 105
S+ I+ FF V P++ + + ++ A ++S ++ LK Q + A ++N
Sbjct: 65 SNKISSPFFTV------PSLLHHLTQNQNPSMTTALLYESIINAHLKS-QLLDKALIFFN 117
Query: 106 E-AKKLPEFRPE--KSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASC 162
E K FRP S L L+R K W L E K D ++ ++ C
Sbjct: 118 EMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKF-----DVYSFGIMIKGC 172
Query: 163 VRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
+ LL + G ++ + + + G K L ++KM G+V +
Sbjct: 173 CENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQ 232
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
+ ++ +K G + LF + K++ + + Y L + G+ A
Sbjct: 233 YTFTVLINGLFKKGLKKDGFDLF---EKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDL 289
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
F +M+E+G+ + Y +LI V AE+L + ++ + + L+ + +
Sbjct: 290 FDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCD 349
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G ++K +++ +K+ L S ++ G+SK + + ++ +G P +VT
Sbjct: 350 VGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVT 409
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+I+AY R+ KA +++ M++ G V Y ++ G ++++ L M
Sbjct: 410 CTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMG 469
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
EP+ IYN+++ + + N + +L +EME + + P+ SY+++I
Sbjct: 470 EMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGV 521
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 146/354 (41%), Gaps = 3/354 (0%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
++ G+ + Y +++ K GD E+ F + L + ++ + +L + L K
Sbjct: 188 LQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYT---FTVLINGLFK 244
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
G + F MK G+ + Y L+ + ++ A +LF E E+G+ +
Sbjct: 245 KGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVT 304
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L+ E V + +V+ MK A + + ++ GF A + +QL
Sbjct: 305 YNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLK 364
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
S G P VTY +I Y + + + EM+ +G V + ++ Y + +
Sbjct: 365 SNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEME 424
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
A + + M+ G P+V++Y L+ N+++ KL++ M V P V Y T+I
Sbjct: 425 KAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMI 484
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
Y + ++ E G V + A ++GV K + EE LL M
Sbjct: 485 HGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKM 538
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 188/444 (42%), Gaps = 21/444 (4%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSED 142
F+S L G L E A+ ++NE K+ +F + + ++I+ ++ D L
Sbjct: 131 FNSLL-GSLVRSNCFEKAWLFFNELKERVKF--DVYSFGIMIKGCCENGNLDKSFQLLGL 187
Query: 143 FKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA----FNSAMGGYNK 198
+ + P+ + L+ C + + A F GE+ L+A F + G K
Sbjct: 188 LQDMGLSPNVVIYTTLIDGCCKNGDIERARLF---FDKMGEMGLVANQYTFTVLINGLFK 244
Query: 199 LHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFS 258
+ ++EKMK G+ + Y +M Y G + LF E + R +++ +
Sbjct: 245 KGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVT 304
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
Y L + + R +EA K MK+ + + Y +LI F + + A L
Sbjct: 305 ---YNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLD 361
Query: 319 EAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ + G+ P + +L+ Y + G + D+ M+ + S +++ + +
Sbjct: 362 QLKSNGL--SPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVR 419
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A ++Y + G +P Y +I+ C ++ K+F M + + V
Sbjct: 420 LQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVI 479
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++M+ Y K A+ L+ +M+AKG PNV Y+S++ + + + E L +M
Sbjct: 480 YNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMI 539
Query: 497 RRKVTPDKVSYTTVISAYNRAREF 520
++ P ++++ ++A+ F
Sbjct: 540 ELQLKPS----ASILNMISKAKNF 559
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 142/328 (43%), Gaps = 36/328 (10%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y+ + ++ KS +AL FF +M +KG++ P+I+ SL+ S + A F E
Sbjct: 95 LYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNEL 154
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
+E+ + D ++ E G ++K+ ++ +++ L + I +++G K
Sbjct: 155 KER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDI 213
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A ++++ G + Q T+ +IN + L +F +M+ G + Y+ +
Sbjct: 214 ERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCL 273
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ Y G+I A L +M+ +G E NV YN+L+ R + + + EKL +M++ V
Sbjct: 274 MNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAV 333
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
+P+ ++Y T+I GG D VG K S
Sbjct: 334 SPNLITYNTLI----------------------GGFCD-------VGNLDKASS------ 358
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAG 588
LL +KS G Y+ + AG
Sbjct: 359 LLDQLKSNGLSPSLVTYNILIEGYSKAG 386
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/469 (21%), Positives = 203/469 (43%), Gaps = 18/469 (3%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
+LI + ++ + + + K + PD TC+ L+ V A + + + +
Sbjct: 249 VFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEEL 308
Query: 179 ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD----SG------CYCQIM 228
G + + M ++ Y S + M+ A ++L SG Y +
Sbjct: 309 KDRGPSPNIYTYTIM-----MNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYI 363
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
K+G+ E AAL L ++ + P ++H + + K G FEAL+ +MK
Sbjct: 364 HGLCKVGNVE--AALML-IRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSS 420
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GIL D Y+ LI +F +V +L +E E + L+ ++ +++
Sbjct: 421 GILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNA 480
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+D+ S+ + K + +++GF + +A+K+ E++I +P + S+I
Sbjct: 481 VDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRG 540
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
Y ++ L+ +A +VF M + G +A + ++ + G ++A+ L+ + G N
Sbjct: 541 YYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLN 600
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
YN+++ + + +L M +R V P V+Y+T+IS + + F V +
Sbjct: 601 PHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFT 660
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
G + A I++ +FS ++ E + ++MK G LD+ Y
Sbjct: 661 RMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISY 709
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 188/409 (45%), Gaps = 5/409 (1%)
Query: 141 EDFKIYNVLPDAHTCSRLV-ASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKL 199
E+ K +LPD ++ S L+ A C + K + + ++ + + +++++ S + G K
Sbjct: 415 EEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKK 474
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
+M + + ++ + ++ DS Y +++ + GD + L E +L T FS
Sbjct: 475 NMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSC 534
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ L K G +AL+ F M GI D ++ K A L ++
Sbjct: 535 ---RSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLED 591
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+E G +P ++ +EG E+ L+++ M + S +++GF+K+
Sbjct: 592 FQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSN 651
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ AV ++ +++ G TY +++ + +A +F EM+++G ++Y++
Sbjct: 652 FKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTT 711
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ + ++ A L +M +GC PNV Y ++D ++ + ++ +M R
Sbjct: 712 LIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDS 771
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
V PD V+YT +I Y++ FD K Y+ + + GV+ I ++G+
Sbjct: 772 VIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMK-DKGVLPDDITHNVLGL 819
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/423 (19%), Positives = 182/423 (43%), Gaps = 40/423 (9%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+FN + G+ K + + V E+MKS+GI+ D Y ++ A+ GD K L E
Sbjct: 393 SFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEM 452
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+ ++ + S Y L L K A+ F + D ++Y +LI F
Sbjct: 453 EHSQIKPSIVS---YTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQ 509
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++ A +L +E ++ C L+ Y + GL ++ L+V +M + D I+
Sbjct: 510 GDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGI-WPDTIA 568
Query: 368 CAIVNGFSKRRGYWA------------------------------------AVKVYEQLI 391
C + S R GY+ A+++ +++
Sbjct: 569 CNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRML 628
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+ +P V Y+++I+ + + + + +A +F M + G + Y+ +++++ + ++
Sbjct: 629 KRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMH 688
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+A + +MK +G + Y +L+ + +++ L++EM R +P+ ++YT +I
Sbjct: 689 EAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCII 748
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+ ++ D+ +++ + + D +++ + K ++ KL MK +G
Sbjct: 749 DGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVL 808
Query: 572 LDE 574
D+
Sbjct: 809 PDD 811
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 156/411 (37%), Gaps = 39/411 (9%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
++L + H P + S +HG+ K Q A D ++ + + + + LI
Sbjct: 446 LDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQN-AVDIFHSIGA-SSCKYDSTVYETLI 503
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
DS + L E+ ++P A +C L+
Sbjct: 504 DGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIR------------------------ 539
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
GY KL ++ + V+ M GI D+ I++ + G ++ L
Sbjct: 540 ----------GYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLL 589
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ + + P H Y + L K G AL+ M ++ +L Y++LI F
Sbjct: 590 EDFQEHGFNLNP---HSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGF 646
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
A + K A LF + G+ + L+ ++ + + + + MK L +
Sbjct: 647 AKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQ 706
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
++ GF R A ++E++ +GC P +TY II+ +C+ A VF +
Sbjct: 707 ISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDK 766
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
M + VV Y+ ++ Y K G A L MK KG P+ +N L
Sbjct: 767 MNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 121/262 (46%), Gaps = 5/262 (1%)
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
G VE L ++ ++ ++ ++ GF KR + A++V E++ S G +P +Y
Sbjct: 370 GNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSY 429
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+ +INA+C K + EM+ +V+Y+S++ K +++A+ + + A
Sbjct: 430 SILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGA 489
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
C+ + +Y +L+D ++ KL +EM ++ P S ++I Y + FD
Sbjct: 490 SSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQ 549
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
++ +N +G D ++ + +E + LL+D + G L+ Y++ +
Sbjct: 550 ALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIY 609
Query: 583 ALRDAG-----LQMQAQWLQQN 599
L G L++ + L++N
Sbjct: 610 KLCKEGYPERALELLPRMLKRN 631
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 146/387 (37%), Gaps = 50/387 (12%)
Query: 261 MYKILCDSLGKSGRA----FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
++ +L D +G A FE F D + + ++ LI FAS + ++ A ++
Sbjct: 211 VWALLRDIVGFCNEAKYDTFELFSAFLDSPQH-VERSGVVFDVLISVFASNSMLENALDV 269
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN-------------AKLKIS 363
F A+ G+ D C L+ +E VE V E +K+ S
Sbjct: 270 FSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCS 329
Query: 364 DCISC-------AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV---------------- 400
D + C A++ G R G V Y I C G V
Sbjct: 330 D-VGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQP 388
Query: 401 ----TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
++ +I +C+ +A +V EM+ G V +YS ++ + G + + L
Sbjct: 389 LNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDL 448
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKN--LRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ +M+ +P++ Y SL +HG K L+ ++ + D Y T+I +
Sbjct: 449 MEEMEHSQIKPSIVSYTSL--IHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGF 506
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ D +K E N V ++ + KL ++ +++ M +G D
Sbjct: 507 CMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDT 566
Query: 575 RLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ ++ AG +A L ++F+
Sbjct: 567 IACNYILDGSCRAGYFKEALTLLEDFQ 593
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 169/396 (42%), Gaps = 38/396 (9%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
++ MK G+V + ++ + K+ +E V L+ E K+ ST ++ + I+ +
Sbjct: 189 FDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYT---FNIMINV 245
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L K G+ +A F M+ G+ + Y ++I + S V+ A + + +G+ D
Sbjct: 246 LCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPD 305
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK------------ 376
L+ + G +E+ ++E MK L + +++G+
Sbjct: 306 SYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRD 365
Query: 377 ---RRGYWAAVKVYEQLI--------------------SQGCIPGQVTYASIINAYCRIA 413
RR V Y LI G +P +TY +IN YCR
Sbjct: 366 EMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCG 425
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
KA + EM KG +V Y+S++ + K R++ A L K+ +G P++ ++N
Sbjct: 426 NAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFN 485
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+L+D H NL + L KEM++R + PD+V+Y T++ R + + + E +
Sbjct: 486 ALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRR 545
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
G D ++ +SK I + + +M S G
Sbjct: 546 GIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIG 581
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 192/450 (42%), Gaps = 16/450 (3%)
Query: 76 AVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
VP + F++ L LK QT E + Y E +L + + T ++I L + K
Sbjct: 197 VVPKIETFNAMLSLFLKLNQT-ETVWVLYAEMFRL-KIKSTVYTFNIMINVLCKEGKLKK 254
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDG-EIALLAFNSAM 193
+ V P+ T + ++ C R R + A +L + G E + S +
Sbjct: 255 AKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR-VEGARMVLDIMKNRGVEPDSYTYGSLI 313
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G K + EKMK G++ + Y +++ Y GD K E R +
Sbjct: 314 SGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAIL 373
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
T Y +L +L G+ EA +DM + GI+ D Y LI + K A
Sbjct: 374 PT---VSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKA 430
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
L E KG+ P + L+Y+ + ++ D+ E + + A++
Sbjct: 431 FNLHDEMISKGI--QPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALI 488
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+G A + +++ + +P +VTY +++ CR +A ++ EM+++G
Sbjct: 489 DGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIR 548
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ--VE 489
++Y+++++ Y K G I DA + +M + G P + YN+L+ G KN + E
Sbjct: 549 PDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALI--QGLCKNQQGDLAE 606
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRARE 519
+L KEM + +TPD +Y ++I + +
Sbjct: 607 ELLKEMVSKGITPDDSTYFSLIEGIGKVDD 636
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 138/316 (43%), Gaps = 12/316 (3%)
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
R +A + F MKEKG++ + +++ F + + + L+ E +
Sbjct: 181 RGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFN 240
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ 393
++ + +EG ++K D + SM+N +K + +++G+ R A V + + ++
Sbjct: 241 IMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNR 300
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G P TY S+I+ C+ +A + +M++ G V Y++++ Y G + A
Sbjct: 301 GVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKA 360
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+M + P V YN L+ + + + + K+M + PD ++Y +I+
Sbjct: 361 FGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILING 420
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG------VFSKLSQIEELVKLLQDMKS 567
Y R C F ++ +I + I +V V SK ++++ L + +
Sbjct: 421 YCR------CGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIR 474
Query: 568 EGTKLDERLYHSAMNA 583
EG D ++++ ++
Sbjct: 475 EGASPDLIMFNALIDG 490
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 75/170 (44%)
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
+ + +I A C + A + F M++KG + +++M++++ K + L A+
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M + V+ +N ++++ + L++ + ME V P+ V+Y TVI Y
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ + + G D G ++ K ++EE +L+ MK G
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIG 336
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 158/356 (44%), Gaps = 31/356 (8%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
++ G+ + ++ A G +E+ A+F E K L P T Y L K
Sbjct: 353 VQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGL--MP-RTRAYNALLKGYVK 409
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+G +A +M+ G D Y+ LI ++A+ + A + KE E G+ + V
Sbjct: 410 TGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYV 469
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
+++ Y + G +K+ V+ M+N+ + +++ F K A+ ++++
Sbjct: 470 FSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMR 529
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+G P VT+ ++I+ +C+ ++KAE++F MQ+ G C Y+ M+ +G+ R
Sbjct: 530 MEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWE 589
Query: 452 DAMWLVAK----------------------------MKAKGCEPNVWIYNSLMDMHGRAK 483
D L+ K M+A G +P+V + NSL++ G +
Sbjct: 590 DVKTLLGKMQSQGLLANVVTYTTLGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDR 649
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+ + + M+ + PD V+YTT++ A R +FD Y E ++G DR
Sbjct: 650 RDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDR 705
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 154/342 (45%), Gaps = 15/342 (4%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y IL +LG+S + +EA + ++ L P Y +LI + A +++ A L
Sbjct: 227 LYSILIHALGRSEKLYEAFL----LSQRQTLT-PLTYNALIGACARNDDLEKALNLMSRM 281
Query: 321 EEKGMLRDPEVCLKLVLMYI------EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
G D V ++ + + +++K +ES K+++ + I+ GF
Sbjct: 282 RRDGYPSD-FVNYSFIIQSLTRTNKSDSSMLQKIYAEIES---DKIELDGQLLNDIIVGF 337
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+K A+ + G P T ++I A +AE +F E+++ G
Sbjct: 338 AKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRT 397
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
AY++++ Y KTG ++DA +V++M+ G P+ Y+ L+D + A + KE
Sbjct: 398 RAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKE 457
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
ME V P+ ++ ++++Y ++ + E R +G DR +M+ F K +
Sbjct: 458 MEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNC 517
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ + M+ EG + D +++ ++ +G +A+ L
Sbjct: 518 LDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEEL 559
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 152/370 (41%), Gaps = 11/370 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL--KF 281
Y ++ A + D EK AL L + R+ D P Y + SL ++ ++ ++ K
Sbjct: 258 YNALIGACARNDDLEK--ALNLMSRMRR-DGYPSDFVNYSFIIQSLTRTNKSDSSMLQKI 314
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+ +++ I D + +I FA +V A + G+ + ++
Sbjct: 315 YAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGN 374
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G E+ + E +K L A++ G+ K A + ++ G P + T
Sbjct: 375 AGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHT 434
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y+ +I+AY + A V EM+ G +S ++A Y G+ + + ++ +M+
Sbjct: 435 YSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMR 494
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
G P+ YN ++D G+ L + M V PD V++ T+I + ++ +
Sbjct: 495 NSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHN 554
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG------TKLDER 575
+ + + +G IM+ F + + E++ LL M+S+G T
Sbjct: 555 KAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLG 614
Query: 576 LYHSAMNALR 585
L A+NA R
Sbjct: 615 LSEQAINAFR 624
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 146/355 (41%), Gaps = 50/355 (14%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P + +++ L G +K ++ A +E ++ F P++ T LLI + +W+S
Sbjct: 394 MPRTRAYNALLKGYVKTGSLKD-AESIVSEMER-SGFSPDEHTYSLLIDAYANAGRWESA 451
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
+ ++ + V P+++ SR++AS Y
Sbjct: 452 RIVLKEMEASGVRPNSYVFSRILAS----------------------------------Y 477
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDS 254
+ + V +M+++G+ D Y +++ + K + A F + + + D+
Sbjct: 478 RDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDA 537
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
++T L D KSG +A + F M+E G + Y +I SF + +
Sbjct: 538 VTWNT-----LIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVK 592
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
L + + +G+L + V+ Y GL E+ ++ M+ LK S + +++N F
Sbjct: 593 TLLGKMQSQGLLAN-------VVTYTTLGLSEQAINAFRVMRADGLKPSVLVLNSLINAF 645
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+ R A V + + P VTY +++ A R+ + K V+ EM G
Sbjct: 646 GEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSG 700
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 100/223 (44%), Gaps = 5/223 (2%)
Query: 385 KVYEQ-LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
K+YE L+SQ +TY ++I A R KA + M++ G+ V YS ++
Sbjct: 240 KLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFIIQS 299
Query: 444 YGKTGRIRDAMW--LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+T + +M + A++++ E + + N ++ ++ ++ + ++ ++
Sbjct: 300 LTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLS 359
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVK 560
P + VI+A A + + E + GG++ R A ++ + K +++
Sbjct: 360 PKTATLVAVITALGNAGRTEEAEAIFEELK-EGGLMPRTRAYNALLKGYVKTGSLKDAES 418
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
++ +M+ G DE Y ++A +AG A+ + + E +
Sbjct: 419 IVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEAS 461
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 108/508 (21%), Positives = 222/508 (43%), Gaps = 10/508 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ + G K + A D + K+ +P + L+ +L + + +
Sbjct: 123 PDVVAYNTLIAGYCK-AGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM--GG 195
++ ++ + D + C+ L+ R + A LL +T A AF +
Sbjct: 182 AVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLH-HMTAHACARDAFTYGILVNA 240
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ + + E + G L + Y I++ + + G + LF +++
Sbjct: 241 HCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPD 300
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
F+ ++ LC KS + EAL F++ ++ G++ D Y+ L+ +F A E
Sbjct: 301 VFTYNLLIALC----KSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALE 356
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV-NGF 374
+F ++ G + D V L+ ++G V++ L+++E M N K + DC + IV +
Sbjct: 357 VFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM-NRKGIMPDCRTYNIVIDVL 415
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
S Y A + + + P VTY +++N ++ +A +F EMQ +
Sbjct: 416 SSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDL 475
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ +++ K GR+ DA+ A++ G PN +IYN+L+ R+ + + +L+++
Sbjct: 476 TTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQD 535
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M PD ++YT ++ ++R M ++ E G A +++ S Q
Sbjct: 536 MIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQ 595
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMN 582
+E+ L ++M ++G D + Y + N
Sbjct: 596 VEDAYTLFKEMIAKGFNPDMQTYSALPN 623
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 186/440 (42%), Gaps = 43/440 (9%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMK-SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+AF +AM ++ + +++ M+ + D Y ++ Y K GD ++ +F
Sbjct: 90 VAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFR 149
Query: 246 ECK---SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
K S K ++ F T + LC K RA +AL F++M G+ D ++ +LI
Sbjct: 150 RLKQEGSCKPNAVSFDT-LVIFLC----KMSRATDALAVFQEMLGAGLKADVNVCNTLIH 204
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ ++ A L RD LV + G + + +E ++ +
Sbjct: 205 CTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCAL 264
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP------------------------- 397
S I+ GF + A +++E +++ +P
Sbjct: 265 SAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQ 324
Query: 398 ----GQV-----TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
G V TY+ +++A+ + +KA +VF MQ+ G V Y+ +++ GK G
Sbjct: 325 EAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQG 384
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
++ +A+ L+ M KG P+ YN ++D+ + + M+RRK +PD V+Y
Sbjct: 385 KVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYN 444
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
T+++ + R D ++E + N + D G ++ +K ++E+ ++ +
Sbjct: 445 TLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKM 504
Query: 569 GTKLDERLYHSAMNALRDAG 588
G + +Y++ ++ +G
Sbjct: 505 GHAPNSYIYNALISGFCRSG 524
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 174/413 (42%), Gaps = 14/413 (3%)
Query: 72 HHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTL-----KLLIRY 126
HH TA A+ D+F +G+L + + A + A + R + L +I+
Sbjct: 220 HHMTAHACAR--DAFTYGILVNAHCR--AGQMHEVASFMELARHDGCALSAVNYNFIIQG 275
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA- 185
++ + L E +PD T + L+A C ++++ + A TL Q G +
Sbjct: 276 FIRCGRLAEATQLFESTMTKESVPDVFTYNLLIALC-KSKQLEEALTLFQEAEQGGVVLD 334
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+ ++ M + K + V+ M+ AG + D+ Y ++ K G ++ L L
Sbjct: 335 VFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALEL-L 393
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E +RK Y I+ D L GR +A FF MK + D Y +L+
Sbjct: 394 EDMNRK--GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLK 451
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ A +LF E + + D L+ + G +E L+ + +
Sbjct: 452 KLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSY 511
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
I A+++GF + ++++ +I C P +TY ++ + R S A ++ EM
Sbjct: 512 IYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEM 571
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
++G + Y+ ++ G++ DA L +M AKG P++ Y++L ++
Sbjct: 572 VREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNL 624
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 175/424 (41%), Gaps = 48/424 (11%)
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL------------- 252
+ Y+ + AG+ +D+ +++ K+G +E +A L E + + +
Sbjct: 3 LATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQA 62
Query: 253 -------------------------DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
D+ F+ M+ LC+ R +A+ F DM+E
Sbjct: 63 FGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMH-WLCEVR----RVEQAMTLFDDMRE 117
Query: 288 K-GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK-LVLMYIEEGLV 345
D Y +LI + + A ++F+ +++G + V LV+ +
Sbjct: 118 TCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRA 177
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPGQVTYAS 404
L V + M A LK +D C + + R G A ++ + + C TY
Sbjct: 178 TDALAVFQEMLGAGLK-ADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGI 236
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
++NA+CR + + G V Y+ ++ + + GR+ +A L K
Sbjct: 237 LVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKE 296
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
P+V+ YN L+ + ++K L + L++E E+ V D +Y+ ++ A+ +A +
Sbjct: 297 SVPDVFTYNLLIAL-CKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKAL 355
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + + G + D + +++ K +++E ++LL+DM +G D R Y+ ++ L
Sbjct: 356 EVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVL 415
Query: 585 RDAG 588
G
Sbjct: 416 SSCG 419
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 125/289 (43%), Gaps = 3/289 (1%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
AL ++ + + G+ D +++ + +L EL E +KG+ C + +
Sbjct: 2 ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQ-GC 395
+ G ++ + +++ M+ D ++ A ++ + R A+ +++ + C
Sbjct: 62 AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC-VVAYSSMVAMYGKTGRIRDAM 454
P V Y ++I YC+ +A +F ++Q+G K V++ ++V K R DA+
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ +M G + +V + N+L+ R LRQ +L M D +Y +++A+
Sbjct: 182 AVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAH 241
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
RA + F R +G + ++ F + ++ E +L +
Sbjct: 242 CRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFE 290
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/504 (20%), Positives = 213/504 (42%), Gaps = 45/504 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA--- 171
P L+ LV+ K + +++SL + + N+ P+ +T + L+ + + +
Sbjct: 67 PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ L ++F + + F + + G + +++++ G Y I++
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186
Query: 232 YKIGDSEKVAALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
KIG + L +E K K D ++T + DSL K RA EA+ FF +M ++G
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNT-----VIDSLCKDRRANEAMYFFSEMVDQG 241
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
I + Y+S++ F ++ ++ A LFK+ + ++ + LV +EG++ +
Sbjct: 242 IPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEAR 301
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKR---------------RGYWAAVKVYEQLISQG 394
V E M ++ A+++G+ + +G+ +V+VY LI+
Sbjct: 302 RVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGH 361
Query: 395 C--------------------IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
C P VTY++++ +C+ A+K+F EM G
Sbjct: 362 CKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDS 421
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ YS ++ K G + +A L+ M+ EP++ IYN L+ L +L+
Sbjct: 422 ITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSN 481
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+ + + P V+YT +IS + + + + + +NG + + + + F +
Sbjct: 482 LFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGD 541
Query: 555 IEELVKLLQDMKSEGTKLDERLYH 578
V+L+++M G D +
Sbjct: 542 PSNAVRLIEEMVGRGFSADSSTFQ 565
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 155/366 (42%), Gaps = 4/366 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P+ +I L + ++ + + + + P+ T S ++ + A +
Sbjct: 208 KPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATS 267
Query: 174 LLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L + I + + F + G K M V+E M G+ D+ Y +M+ Y
Sbjct: 268 LFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYC 327
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
++ LF + S +Y IL + KS R EA +M ++ +
Sbjct: 328 LQSQMDEAQKLFDIMVGKGFAP---SVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTP 384
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
D Y++L+ F ++A++LFKE G+L D L+ + G +++ ++
Sbjct: 385 DTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLL 444
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
++M+ +K++ CI ++ G AA +++ L +G P VTY +I+ +
Sbjct: 445 KAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKE 504
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
L ++A ++F +M G Y+ + + + G +A+ L+ +M +G + +
Sbjct: 505 GLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTF 564
Query: 473 NSLMDM 478
L+D+
Sbjct: 565 QMLLDL 570
>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 181/397 (45%), Gaps = 28/397 (7%)
Query: 179 ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE 238
+T+ E ALLAF G + K ++K + V+ Y ++ + K + +
Sbjct: 153 MTNPETALLAF----GFFRK------------RLKPSREVI---LYNVTLKVFRKCRNLD 193
Query: 239 KVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+ LF E R K D+ FST + SL +A+++F M E G D
Sbjct: 194 RAEKLFDEMLERGVKPDNITFSTIISCARVSSLPN-----KAVEWFEKMPEFGCHPDDVT 248
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y+++I ++ V +A +L+ A + DP L+ +Y G + L+V E MK
Sbjct: 249 YSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMK 308
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+K + I +++ + + W A +Y+++ + G P TYA+++ AY R
Sbjct: 309 ALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAE 368
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG-CEPNVWIYNSL 475
A V+ EM++KG + VV Y++++AM G +A + MK+ G C P+ W ++SL
Sbjct: 369 DALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSL 428
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ ++ + + + E + M P+ T++I Y +A D V+ ++
Sbjct: 429 ITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDI 488
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
D G M+ V ++ S EEL KL+ + KL
Sbjct: 489 TPDDRFCGCMLNVMTQ-SPKEELGKLIDCIDKANPKL 524
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 117/227 (51%), Gaps = 5/227 (2%)
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
+K + S ISCA V+ + AV+ +E++ GC P VTY+++I+AY R
Sbjct: 207 VKPDNITFSTIISCARVSSLPNK-----AVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGN 261
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
A K++ + + + V +S+++ +YG +G + + +MKA G +PN+ IYN+
Sbjct: 262 VDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNT 321
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L+D GRAK Q + ++KEM + P +Y ++ AY RAR + + Y E + G
Sbjct: 322 LLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKG 381
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ + ++ + + + EE + +DMKS G + + S++
Sbjct: 382 LELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSL 428
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%)
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+AEK+F EM ++G + +S++++ + A+ KM GC P+ Y++++
Sbjct: 194 RAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMI 253
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D +GRA N+ KL+ K D V+++T+I Y + FD C+ Y E + G
Sbjct: 254 DAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVK 313
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ I ++ + + + + ++M + G + Y + + A
Sbjct: 314 PNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRA 360
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V+ Y+ + ++ K + A L +M +G +P+ +++++ R +L W
Sbjct: 176 VILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISC-ARVSSLPNKAVEWF 234
Query: 494 E-MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
E M PD V+Y+ +I AY RA DM +K Y+ R ID ++ ++
Sbjct: 235 EKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMS 294
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ + + ++MK+ G K + +Y++ ++A+ A QA+
Sbjct: 295 GNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAK 336
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 10/239 (4%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A Y+ A+ ++R + T LIR S +D +++ E+ K V P+ +
Sbjct: 263 DMALKLYDRART-EKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNT 321
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+ + RA++ A + + +G + + + + + Y + ++VY++MK G
Sbjct: 322 LLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKG 381
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK---LDSTPFSTHMYKILCDSLGKSG 273
+ L Y ++ +G +E+ AA+F + KS DS FS+ + C SG
Sbjct: 382 LELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSC-----SG 436
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
+ EA M E G + + SLI + F E + D C
Sbjct: 437 KVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDITPDDRFC 495
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 149/282 (52%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y + G + AL+ +M+ +GI + Y++L+ E+ LA++++K+
Sbjct: 277 YTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQ 336
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
E+G + L+ +Y++ E+ + V+++++ ++ +++ +K
Sbjct: 337 MLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQ 396
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A+KVYE++++ G P TY ++I+AY + KA ++F +M ++G ++ V+ YSS
Sbjct: 397 PEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSS 456
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
+++ K GR A+ L +KM + C+PNV +NSL+ + + +L+++M+ +
Sbjct: 457 LISACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQG 516
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
PD ++Y +I+AY R ++ +K + + + G D A+
Sbjct: 517 CKPDSITYCGLITAYERGGQWRRALKAFEQMQTQGCHPDAAV 558
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 155/340 (45%), Gaps = 7/340 (2%)
Query: 265 LCDSLGKSG---RAFEALKFFRDMK---EKGILEDPSIYASLICSFASITEVKLAEELFK 318
L L K G RA E + R+++ E L D Y ++I S +++ A EL
Sbjct: 241 LLKELAKQGYLKRAVEIFDWLRNLEPSHELSSLCDLYTYTTMISQCGSHQQLRRALELVA 300
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E +G+ + L+ + I+ ++ DV + M + +++ + KR
Sbjct: 301 EMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVKRC 360
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ AVKV + L Q TY ++I+A + +A KV+ +M G Y+
Sbjct: 361 QWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYT 420
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
++++ YGK G++ A+ + M +GCE NV Y+SL+ +A +L+ +M +
Sbjct: 421 ALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKE 480
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
P+ V++ ++I+A + ++ + + + + G D ++ + + Q
Sbjct: 481 NCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRA 540
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAG-LQMQAQWLQ 597
+K + M+++G D +++S M L +G L Q++ LQ
Sbjct: 541 LKAFEQMQTQGCHPDAAVFNSLMEVLWQSGVLLAQSKALQ 580
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 132/300 (44%), Gaps = 41/300 (13%)
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVY 209
+ HT S L+ C++A + +A + + + +G L+ +N + Y K + + V
Sbjct: 310 NVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVL 369
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+ ++ I + Y ++ A K G E+ AL + K P +T Y L +
Sbjct: 370 DTLEKQAIQAEVRTYNTVISACNKSGQPEQ--ALKVYEKMLAAGVKPSAT-TYTALISAY 426
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
GK G+ +AL+ FRDM +G + Y+SLI + ++A ELF + +
Sbjct: 427 GKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHK------- 479
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYE 388
E C V+ + + + A +G G+W A +++E
Sbjct: 480 ENCKPNVVTF------------------------NSLIAACSHG-----GHWEKASELFE 510
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
Q+ +QGC P +TY +I AY R + +A K F +MQ +G ++S++ + ++G
Sbjct: 511 QMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQTQGCHPDAAVFNSLMEVLWQSG 570
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 106/268 (39%), Gaps = 48/268 (17%)
Query: 140 SEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKL 199
S + YN+L D + V C K+ +TL + I + + +N+ + NK
Sbjct: 343 SPNLVTYNILIDVY-----VKRCQWEEAVKVLDTLEKQAI---QAEVRTYNTVISACNKS 394
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
+ VYEKM +AG+ + Y ++ AY K G EK
Sbjct: 395 GQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEK-------------------- 434
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
AL+ FRDM +G + Y+SLI + ++A ELF +
Sbjct: 435 ------------------ALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSK 476
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
++ + L+ G EK ++ E M+ K C ++ + +R G
Sbjct: 477 MHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAY-ERGG 535
Query: 380 YW-AAVKVYEQLISQGCIPGQVTYASII 406
W A+K +EQ+ +QGC P + S++
Sbjct: 536 QWRRALKAFEQMQTQGCHPDAAVFNSLM 563
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 173/399 (43%), Gaps = 4/399 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +LI L + +++ L + + A+T + L+ A +L
Sbjct: 267 PNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSL 326
Query: 175 LQVFITDGEIALLA-FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + G +A +NS + G KL + M + ++ D Y ++ Y +
Sbjct: 327 QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCR 386
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G+ K LF E +S L T + Y L D L + G A + +M +GI D
Sbjct: 387 LGNLMKAFLLFDELRSIYLFPTIVT---YNTLLDGLCRQGELEVAQQLKVEMINEGIAPD 443
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y L+ + + +A+E F E +G+ D ++ ++ G + + E
Sbjct: 444 IVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQE 503
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M I +V+G K A ++ ++++S G IP VTY SII+A+
Sbjct: 504 EMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENG 563
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
K ++F EM KG VV Y+ ++ + GR+ A ++M+ KG PNV YN
Sbjct: 564 RLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYN 623
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
SL++ + + + Q + EM + + P+K SYT +I+
Sbjct: 624 SLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 182/439 (41%), Gaps = 10/439 (2%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL----LAFNSAMGGYNKLHMYYST 205
PD C+R++ R + + ++V+ T GE + + +N+ + Y K
Sbjct: 197 PDVKNCNRILRIL---RDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQG 253
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ + +M+ G + Y ++ K G+ E+ L E L S + Y L
Sbjct: 254 LDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLK---VSAYTYNPL 310
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
G EAL +M KG + Y S I + + A + + +
Sbjct: 311 IYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNL 370
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
L D L+ Y G + K + + +++ L + +++G ++ A +
Sbjct: 371 LPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQ 430
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+ ++I++G P VTY ++N C++ S A++ F EM +G + AY++ +
Sbjct: 431 LKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL 490
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K G A L +M AKG P++ IYN ++D + NL + +L ++M V PD V
Sbjct: 491 KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYV 550
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+YT++I A+ + + E G +++ + ++E +M
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM 610
Query: 566 KSEGTKLDERLYHSAMNAL 584
+ +G + Y+S +N L
Sbjct: 611 QEKGILPNVITYNSLINGL 629
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 67/370 (18%), Positives = 138/370 (37%), Gaps = 68/370 (18%)
Query: 237 SEKVAALFLECKSRKLDST------PFS-THMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
S KV LF C DST PFS TH ++ S+ + F ++ +
Sbjct: 19 SIKVRLLF-PCSFSFHDSTSNHSAPPFSETHFQDVISKSIREKPSNFSNY-YWLSHQFGP 76
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL-MYIEEGLVEKT 348
++ DP ++ ++ SF T ++A LF+ AE + R E +L + + L+
Sbjct: 77 VIVDPDLFVRVLSSFR--TSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSA 134
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
V+E + NA + ++ + LI GC+ +V+
Sbjct: 135 YWVMERVINANMH-----------------------RIVDVLIG-GCVSSEVS------- 163
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
V ++ +Y K + + + KM P+
Sbjct: 164 -------------------------VKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPD 198
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
V N ++ + + + ++++ M + P V+Y T++ +Y + + + +
Sbjct: 199 VKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLS 258
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E + G + +++ SK + E+ L+ +M G K+ Y+ + + G
Sbjct: 259 EMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKG 318
Query: 589 LQMQAQWLQQ 598
+ +A LQ+
Sbjct: 319 MLAEALSLQE 328
>gi|242054883|ref|XP_002456587.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
gi|241928562|gb|EES01707.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
Length = 655
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 178/385 (46%), Gaps = 20/385 (5%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y ++ + + GD + L LE + R + FS Y L +L ++G AL F
Sbjct: 123 YNLLLRSSCRAGDLRLASGLLLEMRERGVTPDAFS---YSTLLAALTRAGHLDHALTFLP 179
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
M++ + D ++++LI + A LF G+ D + V Y +
Sbjct: 180 LMEDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSD 239
Query: 344 LVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCI-PGQVT 401
L+ ++ A D + I+ ++R + AAV ++ + + + P
Sbjct: 240 LIRDAKRLLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSV 299
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ I+NAY ++ L +A+++F M++ G VV Y++M+ +YG G +A+ L M+
Sbjct: 300 FNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMR 359
Query: 462 A---------KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
+ +PNV YN+++ ++G++ + KL ++M+ V PD ++Y+T++S
Sbjct: 360 SASDGNGGAGSSVKPNVVTYNTMIAIYGKSLEDEKAGKLVQDMQAIGVQPDAITYSTILS 419
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK-SEGTK 571
+ +A + D K + + R G ID + MV + + + + +LL+D+K EG
Sbjct: 420 IWVKAGKLDRAAKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEGIP 479
Query: 572 LDERLYHSAMNALRDAGLQMQAQWL 596
+ +A+ L AG +A WL
Sbjct: 480 KE-----TAIKILASAGRLEEAAWL 499
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/481 (19%), Positives = 195/481 (40%), Gaps = 65/481 (13%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYY--- 203
V PDA + S L+A+ RA A T L + D L S N +H+
Sbjct: 150 GVTPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLILFS-----NLIHLALRGG 204
Query: 204 ---STILVYEKMKSAGIVLDSGCYCQIMEAYYK---IGDSEKVAALFLECKSRKLDSTPF 257
+ ++ ++++AGI D Y + AY K I D+++ L D
Sbjct: 205 DAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLIRDAKR-----LLLHDMPADGVAP 259
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKG-ILEDPSIYASLICSFASITEVKLAEEL 316
Y + +L + GR A+ F M+ + D S++ ++ ++ + + A+ L
Sbjct: 260 DAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIILNAYGQLDLAREADRL 319
Query: 317 FKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAK---------LKISDC 365
F G+ P V ++ +Y + GL + + + + M++A +K +
Sbjct: 320 FWSMRRAGV--PPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSASDGNGGAGSSVKPNVV 377
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++ + K A K+ + + + G P +TY++I++ + + +A K+F ++
Sbjct: 378 TYNTMIAIYGKSLEDEKAGKLVQDMQAIGVQPDAITYSTILSIWVKAGKLDRAAKLFEKL 437
Query: 426 QQKGFDKCVVAYSSMVAMYGKTG-------------------------------RIRDAM 454
++ G + V Y +MV Y + G R+ +A
Sbjct: 438 REAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEGIPKETAIKILASAGRLEEAA 497
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
WL + G + ++ ++MD++ + + R V +++ EM + PD + T ++AY
Sbjct: 498 WLFRRAANTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQLPDSETIATAMNAY 557
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ ++FD Y R G V + M+ + + L L+ ++ S +D+
Sbjct: 558 GKLKDFDKAAALYQAMREEGCVFSDRVHFQMISLLGAQKDFKALEVLVGEL-SHDPSIDK 616
Query: 575 R 575
R
Sbjct: 617 R 617
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 158/401 (39%), Gaps = 12/401 (2%)
Query: 139 LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGGY 196
L D V PDA T S ++A+ R + A +L + L FN + Y
Sbjct: 248 LLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIILNAY 307
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK----- 251
+L + ++ M+ AG+ Y ++ Y G + LF +S
Sbjct: 308 GQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSASDGNGG 367
Query: 252 -LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
S + Y + GKS +A K +DM+ G+ D Y++++ + ++
Sbjct: 368 AGSSVKPNVVTYNTMIAIYGKSLEDEKAGKLVQDMQAIGVQPDAITYSTILSIWVKAGKL 427
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A +LF++ E G DP + +V+ Y GLV + ++ +K+ + + +
Sbjct: 428 DRAAKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEGIPKETAIKIL 487
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+ W ++ + + G I + ++++ Y + + +VF EM++ G
Sbjct: 488 ASAGRLEEAAW----LFRRAANTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQ 543
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
++ + YGK A L M+ +GC + ++ ++ + G K+ + +E
Sbjct: 544 LPDSETIATAMNAYGKLKDFDKAAALYQAMREEGCVFSDRVHFQMISLLGAQKDFKALEV 603
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
L E+ + Y Y RA +FD N+ R
Sbjct: 604 LVGELSHDPSIDKRELYLVAAGVYERAYKFDKASHIINQIR 644
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/227 (18%), Positives = 91/227 (40%), Gaps = 37/227 (16%)
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW---- 455
+ Y ++ + CR A + +EM+++G +YS+++A + G + A+
Sbjct: 121 IPYNLLLRSSCRAGDLRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPL 180
Query: 456 -------------------------------LVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
L ++++A G P++ YN+ + + ++
Sbjct: 181 MEDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDL 240
Query: 485 LRQVEK-LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV-IDRAIA 542
+R ++ L +M V PD +Y+ +++A R V ++ R V D ++
Sbjct: 241 IRDAKRLLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVF 300
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
I++ + +L E +L M+ G Y++ + DAGL
Sbjct: 301 NIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGL 347
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 99/244 (40%), Gaps = 22/244 (9%)
Query: 203 YSTIL--------------VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
YSTIL ++EK++ AG +D Y ++ AY + G + L + K
Sbjct: 414 YSTILSIWVKAGKLDRAAKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLK 473
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ P T + KIL +GR EA FR G ++D S++ +++ +A
Sbjct: 474 DP--EGIPKETAI-KILA----SAGRLEEAAWLFRRAANTGEIKDSSVHRAMMDLYAKNR 526
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ E+F E + G L D E + Y + +K + ++M+ SD +
Sbjct: 527 RHRNVIEVFDEMRKLGQLPDSETIATAMNAYGKLKDFDKAAALYQAMREEGCVFSDRVHF 586
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++ ++ + A + +L I + Y Y R + KA + +++
Sbjct: 587 QMISLLGAQKDFKALEVLVGELSHDPSIDKRELYLVAAGVYERAYKFDKASHIINQIRSS 646
Query: 429 G-FD 431
FD
Sbjct: 647 NEFD 650
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 189/475 (39%), Gaps = 43/475 (9%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
P A T + ++ S R A L + + G FNS + GY + + +
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
++KM G D Y ++E + G ++ LF E + HMY L
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDM-------HMYAALVKG 263
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L + R E L R MKE G YA+++ + K AEE+ +E EKG+
Sbjct: 264 LCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPC 323
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF-------------S 375
C ++ Y +EG + L V+E MK K + A+V GF +
Sbjct: 324 VVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLN 383
Query: 376 KRR--GYWAAVKVYEQLISQGCIPG--------------------QVTYASIINAYCRIA 413
K R G Y LI CI G Q TY ++INA C+
Sbjct: 384 KMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDG 443
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+A +F ++ +G V ++S++ K+G+ A + KM + GC P+ + Y+
Sbjct: 444 RTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYS 503
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
S ++ + K ++ EM ++ V P V+YT VI + R + + + + E +
Sbjct: 504 SFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS 563
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G D + + ++ E +L +M G +D Y++ M+ G
Sbjct: 564 GCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG 618
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 116/556 (20%), Positives = 199/556 (35%), Gaps = 68/556 (12%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PDA F+S + G + Q ++A D +++ L F + + LI L ++ + D V
Sbjct: 186 PDAYTFNSLIVGYCRTNQV-DVARDLFDKMP-LRGFAQDVVSYATLIEGLCEAGRIDEAV 243
Query: 138 SL-----SEDFKIYNVL--------------------------PDAHTCSRLVASCVRAR 166
L D +Y L P + +V R R
Sbjct: 244 ELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRER 303
Query: 167 KFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
K K A +LQ G ++ + + Y K + V E MK G + Y
Sbjct: 304 KAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYN 363
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+++ + G K A+ L K R P + Y +L G A + R M
Sbjct: 364 ALVQGFCNEGKVHK--AMTLLNKMRACGVNPDAV-TYNLLIRGQCIDGHIESAFRLLRLM 420
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+ G++ D Y +LI + A LF E +G+ + L+ + G
Sbjct: 421 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 480
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+ +E M +A + + K +G + +++ + P V Y +
Sbjct: 481 DIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIV 540
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
I+ + Y + + EM G + VV Y++ + Y GR+ +A ++ +M G
Sbjct: 541 IHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGV 600
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR------- 518
+ YN+LMD H + K+M P++ +Y ++ R R
Sbjct: 601 TVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLP 660
Query: 519 -----------------EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
FD+ K NEF N G + G FS+ + EE L
Sbjct: 661 LTPAGVWKAIELTDVFGLFDVMKK--NEFLPNSGTYSSILEG-----FSEDGRTEEATSL 713
Query: 562 LQDMKSEGTKLDERLY 577
+ MK + L+E +Y
Sbjct: 714 VSLMKEDSISLNEDIY 729
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 166/429 (38%), Gaps = 27/429 (6%)
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV-ASCVR 164
E KL +P T L++ K ++L + V PDA T + L+ C+
Sbjct: 348 ELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCID 407
Query: 165 ARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGC 223
+ A LL++ DG IA +N+ + K +++ +++ GI ++
Sbjct: 408 GH-IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVT 466
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
+ ++ K G ++ +A FLE K TP T+ Y + L K + E L F
Sbjct: 467 FNSLINGLCKSGKAD-IAWKFLE-KMVSAGCTP-DTYTYSSFIEHLCKMKGSQEGLSFIG 523
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIE 341
+M +K + Y +I L + E G +P+V M Y
Sbjct: 524 EMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC--NPDVVTYTTSMRAYCI 581
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
EG + + +V+ M + + +++G + AV + +Q+ S +P Q T
Sbjct: 582 EGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFT 641
Query: 402 YASIINAYCRIAL-----------------YSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
Y ++ R+ L + +F M++ F YSS++ +
Sbjct: 642 YFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGF 701
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ GR +A LV+ MK N IY +L+ ++K L M + P
Sbjct: 702 SEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQL 761
Query: 505 VSYTTVISA 513
+SY ++S
Sbjct: 762 MSYQHLLSG 770
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 176/371 (47%), Gaps = 10/371 (2%)
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+I+ A G+S AL LE S +L + L LG G AL+ + M
Sbjct: 136 EILSAPSMSGNS---TALLLEKWSHQL----VGLEDFPYLLRELGNRGEWERALQGYEWM 188
Query: 286 KEKGIL--EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
++G L E + + +I + + +V++A ++F A++ G + +V Y G
Sbjct: 189 VQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSG 248
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR-GYWAAVKVYEQLISQGCIPGQVTY 402
+ L V ++MK A K + I++ K A+ ++E++ +G P ++T+
Sbjct: 249 RCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITF 308
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
S+I R +L+ +++VF EMQ++G ++ + Y++++ K G++ A +++ M+
Sbjct: 309 NSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRL 368
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
K PNV Y++++D +G+ + L+ +M+ V PD+VSY T+I Y + FD
Sbjct: 369 KNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDD 428
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ + G D ++ + K + ++ L MK+EG + Y + ++
Sbjct: 429 ALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALID 488
Query: 583 ALRDAGLQMQA 593
A AG+ A
Sbjct: 489 AYSKAGMHQDA 499
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 155/309 (50%), Gaps = 8/309 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ + + AG + Y ++ AY + G + +F K K P + Y + D
Sbjct: 221 VFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMK--KAGCKP-NLITYNTIID 277
Query: 268 SLGKSGRAFE-ALKFFRDMKEKGILEDPSIYASLI--CSFASITEVKLAEELFKEAEEKG 324
+ GK G + AL F +M+++G+ D + SLI CS S+ E ++ +F E + +G
Sbjct: 278 ACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWED--SQRVFAEMQRRG 335
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ +D L+ + G +E ++ SM+ + + +++G+ K + A+
Sbjct: 336 IEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAI 395
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+Y + G P +V+Y ++I+ Y ++ + A +M++ G VV Y++++ Y
Sbjct: 396 GLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAY 455
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
GK G+ +DA L KMKA+G PNV Y++L+D + +A + ++ E +R + PD
Sbjct: 456 GKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDV 515
Query: 505 VSYTTVISA 513
V Y+++I +
Sbjct: 516 VLYSSLIDS 524
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 141/282 (50%), Gaps = 3/282 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++E+M+ G+ D + ++ + E +F E + R ++ F+ Y L D
Sbjct: 292 IFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFT---YNTLID 348
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
++ K G+ A M+ K I + Y+++I + + + A L+ + +E G+
Sbjct: 349 AVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRP 408
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ +Y + G + L + M+ LK A+++ + K+ Y A ++
Sbjct: 409 DRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLF 468
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++ ++G +P +TY+++I+AY + ++ A +F+E ++ G VV YSS++ K
Sbjct: 469 DKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKC 528
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
G + DA+ L+ +M G +PN+ YNSL+D +GR + VE
Sbjct: 529 GLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVE 570
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 161/328 (49%), Gaps = 3/328 (0%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--CSFASITEVKLAEE 315
+ + Y + + G+SGR EALK F+ MK+ G + Y ++I C + ++K A +
Sbjct: 233 NVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGV-DLKKALD 291
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F+E +++G+ D L+ + L E + V M+ ++ +++
Sbjct: 292 IFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVC 351
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A + + + P VTY+++I+ Y ++ + +A ++ +M++ G V
Sbjct: 352 KGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRV 411
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+Y++++ +Y K GR DA+ M+ G + +V YN+L+D +G+ + L+ +M
Sbjct: 412 SYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKM 471
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + P+ ++Y+ +I AY++A + EF+ G D + ++ K +
Sbjct: 472 KAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLV 531
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNA 583
E+ V LLQ+M G + + Y+S ++A
Sbjct: 532 EDAVVLLQEMTQAGIQPNIVTYNSLIDA 559
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/481 (20%), Positives = 188/481 (39%), Gaps = 91/481 (18%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ +++ + K + A D + E +K P++ T LI + W+
Sbjct: 267 PNLITYNTIIDACGKGGVDLKKALDIFEEMQK-EGVEPDRITFNSLIAVCSRGSLWEDSQ 325
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF-ITDGEIALLAFNSAMGGY 196
+ + + + D T + L+ + + + ++A +++ + + ++ +++ + GY
Sbjct: 326 RVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGY 385
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
KL + I +Y MK +G+ D Y +++ Y K+G + CK +
Sbjct: 386 GKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDA---LTACKDMERVGLK 442
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y L D+ GK G+ +A F MK +G++ + Y++LI +++ + A +
Sbjct: 443 ADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSI 502
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F E + G+ P+V L L I C C +V
Sbjct: 503 FVEFKRAGL--KPDVVLYSSL------------------------IDSCCKCGLVED--- 533
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR---------------IALYSK---- 417
AV + +++ G P VTY S+I+AY R I +++K
Sbjct: 534 ------AVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDR 587
Query: 418 -----------------------AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
A VF EMQQ G VV +S+++ + +++A
Sbjct: 588 STEIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEAS 647
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L+ +M+ + W+Y HG LR E +W E +R ++ Y T + Y
Sbjct: 648 VLLEQMRFF----DSWVYGI---AHGLLMGLR--EHVWVEAQRLFDEIARMDYATGAAFY 698
Query: 515 N 515
N
Sbjct: 699 N 699
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 189/404 (46%), Gaps = 8/404 (1%)
Query: 181 DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
D IA+ +++ M GY + ++V++++K G Y ++ Y K+G K+
Sbjct: 446 DAPIAI--YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVG---KI 500
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
+ + K + + Y ++ + K A F DM ++G+ D +Y ++
Sbjct: 501 SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 560
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
I +F + + A + KE ++ + ++ Y + G + ++L+V + M+
Sbjct: 561 ISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 620
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ ++NG ++R AV++ +++ G + TY I+ Y + KA +
Sbjct: 621 VPTVHTFNGLINGLVEKR---QAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 677
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
F +Q +G D + Y +++ K+GR++ A+ + +M A+ N ++YN L+D
Sbjct: 678 YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 737
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
R ++ + L ++M++ V PD +YT+ ISA ++A + + + E G +
Sbjct: 738 RRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIK 797
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ +++ S E+ + ++MK+ G K D+ +YH + +L
Sbjct: 798 TYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 841
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 185/452 (40%), Gaps = 78/452 (17%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC-KSRKLDSTPFSTHMYKILC 266
+E+M++ GI S Y ++ AY D ++ L C + K + S Y ++
Sbjct: 331 TFERMRARGITPTSRIYTSLIHAYAVGRDMDEA----LSCVRKMKEEGIEMSLVTYSVIV 386
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG-- 324
K+G A A +F + K + SIY +I + ++ AE L +E EE+G
Sbjct: 387 GGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGID 446
Query: 325 --------------MLRDPE---VCLK----------------LVLMYIEEGLVEKTLDV 351
M+ D + V K L+ +Y + G + K L+V
Sbjct: 447 APIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 506
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
MK +K + ++NGF K + + A V+E ++ +G P + Y +II+A+C
Sbjct: 507 SRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCG 566
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ +A + EMQ+ + ++ Y K+G +R ++ + M+ GC P V
Sbjct: 567 MGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHT 626
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+N L++ G + RQ ++ EM V+ ++ +YT ++ Y + +++ +
Sbjct: 627 FNGLIN--GLVEK-RQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 683
Query: 532 MNG------------------GVIDRAIA-----------------GIMVGVFSKLSQIE 556
G G + A+A I++ +++ +
Sbjct: 684 NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW 743
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E L+Q MK EG K D Y S ++A AG
Sbjct: 744 EAADLIQQMKKEGVKPDIHTYTSFISACSKAG 775
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 157/358 (43%), Gaps = 6/358 (1%)
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y + GD + F ++R + TP ++ +Y L + EAL R MKE+GI
Sbjct: 319 YGRRGDMHRARETFERMRARGI--TP-TSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGI 375
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
Y+ ++ F+ + A+ F EA+ + + K++ + + +E+
Sbjct: 376 EMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEA 435
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+V M+ + I +++G++ + V+++L G P VTY +IN Y
Sbjct: 436 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYT 495
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
++ SKA +V M+++G + YS M+ + K +A + M +G +P+V
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+YN+++ N+ + + KEM++ + P ++ +I Y ++ + ++ ++
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
R G V G+ + L + + V++L +M G +E Y M G
Sbjct: 616 RRCGCV---PTVHTFNGLINGLVEKRQAVEILDEMTLAGVSANEHTYTKIMQGYASVG 670
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/182 (18%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ ++I+A+ +I+ S+ E + MV YG+ G + A +M+
Sbjct: 294 WQAVISAFEKISKPSRTE-----------------FGLMVKFYGRRGDMHRARETFERMR 336
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
A+G P IY SL+ + +++ + ++M+ + V+Y+ ++ +++A +
Sbjct: 337 ARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAE 396
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+++E + ++ +I G ++ + +E L+++M+ EG +YH+ M
Sbjct: 397 AADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMM 456
Query: 582 NA 583
+
Sbjct: 457 DG 458
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 91/239 (38%), Gaps = 38/239 (15%)
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
W AV + IS+ P + + ++ Y R +A + F M+ +G Y+S+
Sbjct: 294 WQAVISAFEKISK---PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSL 350
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEP--------------------------------- 467
+ Y + +A+ V KMK +G E
Sbjct: 351 IHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHK 410
Query: 468 --NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
N IY ++ H + N+ + E L +EME + Y T++ Y + +
Sbjct: 411 TLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV 470
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + G G ++ +++K+ +I + +++ + MK EG K + + Y +N
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 529
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 122/556 (21%), Positives = 234/556 (42%), Gaps = 29/556 (5%)
Query: 62 FPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLK 121
F + L R+ ++ PD +++ ++G+ K + +E A E + F P T
Sbjct: 161 FEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKE-AVGLLLEMEAAGCF-PNSVTCT 218
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
L+ L + + D + L E K D L++ L +
Sbjct: 219 TLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGK 278
Query: 182 GEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G A ++ ++ + G +L + V M GI D Y +++ K G +
Sbjct: 279 GISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHA 338
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
L L K + S Y +L L K G +A K R M EKG D Y +L
Sbjct: 339 MDL-LNLMVEKGEEP--SNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 395
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK--------LVLMYIEEGLVEKTLDVV 352
+ +V A +LF + D E CL+ L+ +EG + K + +
Sbjct: 396 MKGLCDKGKVDEALKLFNS------MFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 449
Query: 353 ESMKNAKLKISDCISCAIVN----GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
M +K C + N G K A+++++Q++ G +P TY+ +I+
Sbjct: 450 RKM----VKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDG 505
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+C++ + + A+ +F EM+ G + + Y++++A K G + A L +M CEP+
Sbjct: 506 FCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPD 565
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ +N+++D +A + + V++L +M + PD ++++T+I+ ++ E D
Sbjct: 566 IISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALE 625
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+G D + ++ S E++ LL M ++GT LD ++ + + L +
Sbjct: 626 RMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSI 685
Query: 589 LQMQA-QWLQQNFEGT 603
++ + L F+GT
Sbjct: 686 QEVDVMELLPTFFQGT 701
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/475 (21%), Positives = 197/475 (41%), Gaps = 53/475 (11%)
Query: 124 IRYLVQ--SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+R L Q + ++ VSL +N+LP TC+ LV + R+R + +A +
Sbjct: 44 LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFS-------- 95
Query: 182 GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK-- 239
VY +M ++ G ++E + D++K
Sbjct: 96 --------------------------VYRRMTHVDVLPSFGSLSALIECF---ADAQKPQ 126
Query: 240 ----VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
V L L+ R F + I+ L ++G FEA+ R+M K + D
Sbjct: 127 LGFGVVGLVLK---RGFTVNVF---IMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIV 180
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
Y +LI ++K A L E E G + C L+ ++G +++ ++++E+M
Sbjct: 181 SYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAM 240
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
K + +++GF +++++++ +G VTY+ +++ CR+ +
Sbjct: 241 KKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQW 300
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+A V M + G VV Y+ ++ K GR AM L+ M KG EP+ YN L
Sbjct: 301 KEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVL 360
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ + + K+ + M + D V+Y T++ + D +K +N N
Sbjct: 361 LSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNEN 420
Query: 536 VIDRAI--AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
++ + +++G K ++ + VK+ + M +G+ + Y+ + AG
Sbjct: 421 CLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAG 475
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 98/230 (42%), Gaps = 5/230 (2%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+V+ ++ R Y A VY ++ +P + +++I + V + ++G
Sbjct: 80 LVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRG 139
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
F V + ++ + G + +AM L+ +M K P++ YN+L++ +AK L++
Sbjct: 140 FTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAV 199
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
L EME P+ V+ TT++ + D ++ + G D + G ++ F
Sbjct: 200 GLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGF 259
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
++ +L +M +G + Y ++ L G QW + N
Sbjct: 260 CNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLG-----QWKEAN 304
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 182/397 (45%), Gaps = 10/397 (2%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIY---NVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
LLIR VQ++K + +E F+I L + C+ L+ V+ ++A + +
Sbjct: 53 LLIRTYVQARK---LREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREV 109
Query: 179 ITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
+ G E+ + N + K + +M+ GI D Y ++ AY + G
Sbjct: 110 VRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLL 169
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
E+ + + L + F+ Y + + L K GR A +M G+ D + Y
Sbjct: 170 EEAFEIMNSMADKGLKPSLFT---YNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
+L+ A+E+F E +G++ D L+ ++ +++ L MK
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK 286
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
L + I +++G+ + A+K+ ++++ QGC+ + Y +I+N C+ + +
Sbjct: 287 FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTD 346
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A+K+F EM ++G +++++ + + G + A+ L M + +P++ YN+L+D
Sbjct: 347 ADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLID 406
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ + + +LW M RK+ P+ ++Y +I+AY
Sbjct: 407 GFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 443
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 206/469 (43%), Gaps = 41/469 (8%)
Query: 84 DSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDF 143
+S L G++K ELA++ + E + TL +++ L + K+D + S +
Sbjct: 87 NSLLGGLVKIDWV-ELAWEVHREVVR-SGIELNVYTLNIMVNALCKDGKFDDVKSFLSEM 144
Query: 144 KIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMY 202
+ + D T + L+ + R + A ++ G + +L +N+ + G K Y
Sbjct: 145 EGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRY 204
Query: 203 ---------------------YSTILV--------------YEKMKSAGIVLDSGCYCQI 227
Y+T+LV + +M G+V D + +
Sbjct: 205 ARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSL 264
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
+ + + ++ F + K K P + +Y +L ++G EALK +M E
Sbjct: 265 IAVFSRNRHLDQALVYFRDMK--KFGLVPDNV-IYTVLMHGYCRNGNMLEALKIRDEMLE 321
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
+G + D Y +++ + A++LF E E+G L D L+ + ++G + K
Sbjct: 322 QGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTK 381
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
L + +M +K +++GF K A ++++ +IS+ P +TY +IN
Sbjct: 382 ALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILIN 441
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
AYC + S+A +++ M +KG +V ++++ Y ++G A + +M AKG P
Sbjct: 442 AYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAP 501
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ YN+L++ R N+ + +ME+ + PD ++Y V++ + R
Sbjct: 502 DHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCR 550
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/445 (20%), Positives = 194/445 (43%), Gaps = 4/445 (0%)
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVY 209
+ +T + +V + + KF + L +G A ++ +N+ +G Y + + +
Sbjct: 117 NVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIM 176
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
M G+ Y I+ K G + + +E + L +P +T +L +S
Sbjct: 177 NSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGL--SPDTTTYNTLLVESC 234
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
+ + EA + F +M +G++ D ++SLI F+ + A F++ ++ G++ D
Sbjct: 235 RRDNFS-EAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDN 293
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
+ L+ Y G + + L + + M + I+NG K + A K++++
Sbjct: 294 VIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDE 353
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
++ +G +P T+ ++I+ +C+ +KA +F M Q+ +VAY++++ + K G
Sbjct: 354 MVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 413
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ A L M ++ PN Y L++ + ++ + +LW M + + P V+ T
Sbjct: 414 MEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNT 473
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
VI Y R+ + +F G D ++ F + +++ + M+ EG
Sbjct: 474 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEG 533
Query: 570 TKLDERLYHSAMNALRDAGLQMQAQ 594
D Y+ MN G +A+
Sbjct: 534 LLPDIITYNVVMNGFCRQGRMQEAE 558
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 136/289 (47%)
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
++ LI ++ +++ E F+ KG L C L+ ++ VE +V +
Sbjct: 50 VFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREV 109
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+ ++++ +VN K + ++ G VTY ++I AYCR L
Sbjct: 110 VRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLL 169
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+A ++ M KG + Y++++ K GR A ++ +M G P+ YN+L
Sbjct: 170 EEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTL 229
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ R N + ++++ EM R+ V PD VS++++I+ ++R R D + ++ + + G
Sbjct: 230 LVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGL 289
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
V D I +++ + + + E +K+ +M +G LD Y++ +N L
Sbjct: 290 VPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 338
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 168/402 (41%), Gaps = 42/402 (10%)
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
+ LS D YN L LV SC R F A + + G + L++F+S +
Sbjct: 217 IGLSPDTTTYNTL--------LVESC-RRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAV 267
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD---SEKVAALFLE------ 246
+++ ++ + MK G+V D+ Y +M Y + G+ + K+ LE
Sbjct: 268 FSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLD 327
Query: 247 -----------CKSRKL-DSTPFSTHM-----------YKILCDSLGKSGRAFEALKFFR 283
CK + L D+ M + L + G +AL F
Sbjct: 328 VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFG 387
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
M ++ I D Y +LI F + E++ A EL+ + + + L+ Y G
Sbjct: 388 TMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVG 447
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
V + + + M +K + ++ G+ + A + ++I++G P ++Y
Sbjct: 448 HVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYN 507
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
++IN + R KA +M+++G ++ Y+ ++ + + GR+++A ++ KM K
Sbjct: 508 TLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEK 567
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
G P+ Y +L++ H NL + + EM +R PD V
Sbjct: 568 GINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
Query: 377 RRGYWAAVKVYEQLISQ---GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
RR + V+V E L+S C + + +I Y + + + F ++ KG+
Sbjct: 23 RRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVS 82
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ A +S++ K + A + ++ G E NV+ N +++ + V+
Sbjct: 83 INACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLS 142
Query: 494 EMERRKVTPDKVSYTTVISAYNR 516
EME + D V+Y T+I AY R
Sbjct: 143 EMEGNGIYADMVTYNTLIGAYCR 165
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 106/485 (21%), Positives = 205/485 (42%), Gaps = 45/485 (9%)
Query: 110 LPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARK 167
L + P+ S + ++ LV+S + ++VSL + + D S L+ + +
Sbjct: 63 LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122
Query: 168 FKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQ 226
++ ++L + G E ++ + + G + + ++K+ + G L+ Y
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH--MYKILCDSLGKSGRAFEALKFFRD 284
++ K+G + L R++D + MY + DS+ K EA + +
Sbjct: 183 LINGLCKVGQTSAALQLL-----RRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 237
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M KGI D Y +LI F + ++K A +LF + + + +P V
Sbjct: 238 MVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENI--NPNV------------- 282
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
T ++ +V+GF K R A V ++ QG P TY S
Sbjct: 283 --YTFNI------------------LVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNS 322
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+++ YC + +KA+ +F + Q+G + + +YS M+ + K ++ +AM L +M
Sbjct: 323 LMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNN 382
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
P+V YNSL+D + + KL EM R V DK++Y +++ A + + D +
Sbjct: 383 IIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAI 442
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + G D +V K ++E+ + +D+ +G LD +Y + +
Sbjct: 443 ALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGF 502
Query: 585 RDAGL 589
GL
Sbjct: 503 CSHGL 507
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/402 (20%), Positives = 145/402 (36%), Gaps = 76/402 (18%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
++L R + P+ +++ + M K E A+D Y+E P+ T LI
Sbjct: 197 LQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNE-AFDLYSEMVS-KGISPDVVTYNALI 254
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-E 183
K L N+ P+ +T + LV + R+ K A +L + + G +
Sbjct: 255 SGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIK 314
Query: 184 IALLAFNSAMGGY------NKLHMYYSTIL-----------------------------V 208
+ +NS M Y NK ++TI +
Sbjct: 315 PDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNL 374
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+++M I+ D Y +++ K+G L E R P Y + D+
Sbjct: 375 FKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDR---GVPHDKITYNSILDA 431
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L K+ + +A+ MK++GI D Y +L+ ++ A +F++ KG + D
Sbjct: 432 LCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILD 491
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
+ ++ + GL +++LD++ M+
Sbjct: 492 VNIYTAMIQGFCSHGLFDESLDLLSKME-------------------------------- 519
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
GCIP VTY II + KAEK+ EM +G
Sbjct: 520 ---ENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 86/216 (39%), Gaps = 8/216 (3%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
P + ++I + KK D ++L ++ N++PD T + L+ + K A
Sbjct: 349 NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALK 408
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L+ G + +NS + K H I + KMK GI D Y +++
Sbjct: 409 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLC 468
Query: 233 KIGDSEKVAALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K G E +F L K LD ++Y + G E+L M+E G
Sbjct: 469 KNGRLEDARIVFEDLLVKGYILD-----VNIYTAMIQGFCSHGLFDESLDLLSKMEENGC 523
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ + Y +ICS E AE+L +E +G+
Sbjct: 524 IPNAVTYEIIICSLFDKDENDKAEKLLREMITRGLF 559
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 201/441 (45%), Gaps = 12/441 (2%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VP+ + + L LK +TQ +A+ Y E ++ R T ++I L + K
Sbjct: 178 VPNIETCNQMLSLFLKLNRTQ-MAWVLYAEMFRM-NIRSSLYTFNIMINVLCKEGKLKKA 235
Query: 137 VSLSEDFKIYNVLPDAHTCSRLV-ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMG 194
+ V P+ T + ++ C+R KF+ A + Q G E +NS +
Sbjct: 236 KEFIGHMETLGVKPNVVTYNTIIHGHCLRG-KFQRARVIFQTMKDKGLEPDCYTYNSFIS 294
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
G K + KM G+V ++ Y +++ Y GD +K A E S+ + +
Sbjct: 295 GLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMA 354
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+ + Y + +L GR +A ++M+EKG++ D + LI + + K A
Sbjct: 355 SLVT---YNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAF 411
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
L E KG+ P + L+Y+ + +++ + ++ L + A+++
Sbjct: 412 GLLDEMVGKGI--QPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALID 469
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G A ++ +++ + +P ++TY +++ YCR +A ++ EM+++G
Sbjct: 470 GHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKP 529
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
++Y+++++ Y K G ++DA + +M G +P + YN+L+ + + E+L
Sbjct: 530 DHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELL 589
Query: 493 KEMERRKVTPDKVSYTTVISA 513
KEM + +TPD +Y ++I A
Sbjct: 590 KEMVSKGITPDDSTYLSIIEA 610
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 185/418 (44%), Gaps = 38/418 (9%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
L F+ + Y +L + + +K G V + Q++ + K+ ++ L+ E
Sbjct: 147 LIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAE 206
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+ S S + + I+ + L K G+ +A +F M+ G+ + Y ++I
Sbjct: 207 MFRMNIRS---SLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCL 263
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
+ + A +F+ ++KG+ D + +EG +E+ ++ M L +
Sbjct: 264 RGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVT 323
Query: 367 SCAIVNGFSKR---------------RGYWAAVKVYEQLI-------------------- 391
A+++G+ + +G A++ Y I
Sbjct: 324 YNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMR 383
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+G +P VT+ +IN YCR +A + EM KG +V Y+S++ + GK R++
Sbjct: 384 EKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMK 443
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+A L +K++ +G P++ ++N+L+D H N+ + +L KEM+ KV PD+++Y T++
Sbjct: 444 EADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLM 503
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
Y R + + + +E + G D ++ +SK +++ ++ +M + G
Sbjct: 504 QGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTG 561
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/471 (21%), Positives = 205/471 (43%), Gaps = 6/471 (1%)
Query: 117 KSTL--KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
K+TL LL+R + KK + + K +P+ TC+++++ ++ + ++A L
Sbjct: 144 KTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVL 203
Query: 175 L-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
++F + +L FN + K M++ G+ + Y I+ +
Sbjct: 204 YAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCL 263
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G ++ +F K + L+ ++ Y L K GR EA M E G++ +
Sbjct: 264 RGKFQRARVIFQTMKDKGLEPDCYT---YNSFISGLCKEGRLEEASGLICKMLEGGLVPN 320
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y +LI + + ++ A E KG++ + EG + ++++
Sbjct: 321 AVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIK 380
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M+ + ++NG+ + A + ++++ +G P VTY S+I +
Sbjct: 381 EMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRN 440
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+A+ +F ++QQ+G ++ +++++ + G I A L+ +M P+ YN
Sbjct: 441 RMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYN 500
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+LM + R + + +L EM+RR + PD +SY T+IS Y++ + + +E
Sbjct: 501 TLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTT 560
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G ++ K + E +LL++M S+G D+ Y S + A+
Sbjct: 561 GFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 172/371 (46%), Gaps = 5/371 (1%)
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
I +D YC ++ ++G EK + + + + S Y IL ++ + G
Sbjct: 321 IRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKIS---YNILVNAYCQEGDVK 377
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+A+ M+E+G+ + + ++I F EV AE + EKG+ E L+
Sbjct: 378 KAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLI 437
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
Y ++G + + ++ M A +K + +++N K R A V +I +G
Sbjct: 438 NGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVS 497
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P Y +I A C ++ A + F EM Q G D +V Y++++ G+ GR++ A L
Sbjct: 498 PNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDL 557
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+M KGC P+V YNSL+ + ++ N ++ +L+ +M+ + P ++ +I A +
Sbjct: 558 FLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRK 617
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
M F +M+ V D+ + M+ +++ + + + L Q M +G D+
Sbjct: 618 EGVVTMDKMFQEMLQMD-LVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVT 676
Query: 577 YHSAMNA-LRD 586
Y+S + A LRD
Sbjct: 677 YNSLILAYLRD 687
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/498 (21%), Positives = 209/498 (41%), Gaps = 47/498 (9%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A D Y+ +K F P ++ L+R LV S+ ++ +++ D PDA + V
Sbjct: 106 ATDLYSTMRK-DGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAV 164
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
+ V + L++ + DG ++ A+N +GG K+ ++++M +V
Sbjct: 165 QAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMV 224
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
++ Y +++ Y K+G E EA
Sbjct: 225 PNTVTYNTLIDGYCKVGGIE--------------------------------------EA 246
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
L F MKE+ + + Y SL+ V A E+ E E G L P L V
Sbjct: 247 LGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFL--PGGFLSFVFD 304
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
G + L +++I + C ++NG + A +V +L+ G P
Sbjct: 305 DHSNGAGDDGL-----FDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPS 359
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+++Y ++NAYC+ KA +M+++G + + ++++++ + +TG + A V
Sbjct: 360 KISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVR 419
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M KG P V YNSL++ +G+ + + + EM++ + P+ +SY ++I+ + R
Sbjct: 420 RMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDR 479
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ + G + I +++ LS++++ + +M G Y+
Sbjct: 480 KLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYN 539
Query: 579 SAMNALRDAGLQMQAQWL 596
+ +N L G +A+ L
Sbjct: 540 TLINGLGRNGRVKKAEDL 557
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 164/388 (42%), Gaps = 11/388 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P K + +L+ Q + +E + + P+ T + +++ + A T
Sbjct: 358 PSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETW 417
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGI---VLDSGCYCQIMEA 230
++ + G + +NS + GY + + ++M AGI V+ G +
Sbjct: 418 VRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCK 477
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K+ D+E V A + R + +P + +Y +L ++ + +A +FF +M + GI
Sbjct: 478 DRKLIDAEIVLADMI---GRGV--SP-NAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGI 531
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
Y +LI VK AE+LF + KG D L+ Y + +K L+
Sbjct: 532 DATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLE 591
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ + MK +K + ++ ++ G K++++++ +P Q Y +I +Y
Sbjct: 592 LYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYA 650
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
KA + +M +G D V Y+S++ Y + R+ + LV MKAKG P V
Sbjct: 651 EDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVD 710
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERR 498
YN L+ K+ ++EM R
Sbjct: 711 TYNILIKGLCDLKDFNGAYFWYREMVER 738
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 81/221 (36%), Gaps = 35/221 (15%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A +Y + G +P + ++ + K VF ++ G VAY V
Sbjct: 106 ATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQ 165
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ L+ M G P+V+ YN ++ + + ++ KL+ EM +R + P
Sbjct: 166 AAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVP 225
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ V+Y T+I Y K+ IEE +
Sbjct: 226 NTVTYNTLIDGY-----------------------------------CKVGGIEEALGFK 250
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
+ MK + + + Y+S +N L +G A+ + EG+
Sbjct: 251 ERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGS 291
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 56/292 (19%), Positives = 116/292 (39%), Gaps = 37/292 (12%)
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
+V M G+ ++ Y ++EA + + F E +D+T + Y L
Sbjct: 486 IVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVT---YNTLI 542
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA-SITEVKLAE----------- 314
+ LG++GR +A F M KG D Y SLI +A S+ K E
Sbjct: 543 NGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIK 602
Query: 315 ----------------------ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
++F+E + ++ D V +++ Y E+G V K + +
Sbjct: 603 PTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLH 662
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ M + + +++ + + R + + + ++G +P TY +I C +
Sbjct: 663 QQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDL 722
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
++ A + EM ++G V +++ + G +R+A + +++ G
Sbjct: 723 KDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGG 774
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 197/479 (41%), Gaps = 44/479 (9%)
Query: 121 KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
KLLI + + K + +++SLS + + P+ +T + L+ S ++ A ++L +
Sbjct: 64 KLLIS-ITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILK 122
Query: 181 DGEIALLA-FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
G +A FN+ + G + +++KM G + Y ++ K+G +
Sbjct: 123 LGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSA 182
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--Y 297
L +S + + +Y + DSL K + +A F +M +GI PSI Y
Sbjct: 183 AIRLL---RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGI--SPSIFTY 237
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
SLI + ++ E K L E M N
Sbjct: 238 NSLIHALCNLCEWKHVTALLNE-----------------------------------MVN 262
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+K+ + I +V+ K A V + +I +G P VTY ++++ +C + +
Sbjct: 263 SKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDE 322
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A KVF M KGF VV+YS+++ Y K RI AM+L +M K PN Y++LM
Sbjct: 323 AVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMH 382
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
L+ L+ EM R PD VSY ++ + R D + +
Sbjct: 383 GLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDP 442
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
D I I++ + ++E L ++ S+G + Y +N L GL +A L
Sbjct: 443 DIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKL 501
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 156/387 (40%), Gaps = 10/387 (2%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I L R PD + S + + KD Q + A++ ++E P T LI
Sbjct: 184 IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ-AFNLFSEMIH-QGISPSIFTYNSLI 241
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-E 183
L +W + +L + ++P+ S +V + + K A+ ++ + I G E
Sbjct: 242 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 301
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ +N+ M G+ + V++ M G D Y ++ Y KI EK L
Sbjct: 302 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 361
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
F E ++L P +T Y L L GR +A+ F +M +G + D Y L+
Sbjct: 362 FEEMCRKEL--IP-NTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDY 418
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLK 361
+ A L K E M DP++ + +++ G +E D+ ++ + L
Sbjct: 419 LCKNRRLDEAIALLKAIEGSNM--DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLH 476
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++NG ++ A K++ ++ +G P TY I + R + ++
Sbjct: 477 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQL 536
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTG 448
EM +GF V + +V M G
Sbjct: 537 LQEMLARGFSADVSTSTVLVEMLSDDG 563
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 94/233 (40%), Gaps = 4/233 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ + LI + ++ + + L E+ ++P+ T S L+ + + A
Sbjct: 335 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAI 394
Query: 173 TLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L +T G+I +++ + K I + + ++ + + D Y +++
Sbjct: 395 ALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGM 454
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ G+ E LF S+ L ++ Y I+ + L + G EA K F +MK KG
Sbjct: 455 CRAGELEAARDLFSNLSSKGLHPNVWT---YTIMINGLCQQGLLAEASKLFGEMKRKGYS 511
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
+ Y + F E +L +E +G D LV M ++GL
Sbjct: 512 PNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGL 564
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 33/202 (16%), Positives = 81/202 (40%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+ + +++ P + ++ + ++ YS + +M G + + ++
Sbjct: 43 ALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILIN 102
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ R+ A ++AK+ G +PN+ +N+L+ + +V L+ +M P
Sbjct: 103 SFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQP 162
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ V+Y T+I+ + ++ D + ++ K Q+ + L
Sbjct: 163 NVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF 222
Query: 563 QDMKSEGTKLDERLYHSAMNAL 584
+M +G Y+S ++AL
Sbjct: 223 SEMIHQGISPSIFTYNSLIHAL 244
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 179/375 (47%), Gaps = 3/375 (0%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
++M G+ +++ CY +++AY + D ++VA + ++ ++ T Y IL D L
Sbjct: 167 DEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPT---VGTYTILVDGL 223
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
+ + F +MK K + D Y+S+I ++ V+ A E+F E G+ +
Sbjct: 224 SAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNE 283
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
L+ + + G +E +V M+ + I+ + +++G+ ++ A+++
Sbjct: 284 HTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMI 343
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ G TY ++ R +A+ + M +KG V+Y+++++++ G
Sbjct: 344 MEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 403
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ +A L +M G EP++ YN +MD + + ++R+ E+ KEME++ + PD SY
Sbjct: 404 MVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAA 463
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
++ + + D+ ++ + E + G + ++ +K + EE +L +M +G
Sbjct: 464 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 523
Query: 570 TKLDERLYHSAMNAL 584
D+ LY + + +L
Sbjct: 524 LTPDDALYSALVGSL 538
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 110/227 (48%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+V+G+ K A ++ +++ G + Y S+++AY R + ++ M+ +G
Sbjct: 149 VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 208
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ V Y+ +V I + +MK+K +V+ Y+S+++ + RA N+R+
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 268
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+++ E + P++ +Y +I+ + + + + + ++ G I++ + M+ +
Sbjct: 269 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + +++ +++ M+ G +LD Y++ LR A +A+ L
Sbjct: 329 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNL 375
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 35/181 (19%)
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR---------------- 481
S +V Y K+GR+ A L+ +M G + N YNSL+D + R
Sbjct: 147 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 206
Query: 482 -------------------AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
A+++ +VE +++EM+ + ++ D Y++VI+AY RA
Sbjct: 207 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 266
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ ++E NG + G ++ F K+ Q+E L+ DM+ G +++ ++++ ++
Sbjct: 267 ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMID 326
Query: 583 A 583
Sbjct: 327 G 327
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 192/443 (43%), Gaps = 39/443 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
PE + L++ LV+ ++WD L ++ + D ++ LV R+ + L
Sbjct: 1110 PEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKL 1169
Query: 175 LQVFITDGEIALLAF-NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
++ G I + F N + GY + +L+ +M++ G + Y ++ K
Sbjct: 1170 IEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGK 1229
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
GD EK+ +LFLE + R + +Y + D+L K A +A+ + M G D
Sbjct: 1230 KGDLEKIGSLFLEMRKRGFSP---NVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPD 1286
Query: 294 PSIYASLICSFASITEVKLAEELFKEA--------------------------------- 320
+ +LI V+ AE +EA
Sbjct: 1287 IITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLV 1346
Query: 321 EEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E G P+V L++ + G V + L V E M ++ I +++G K+R
Sbjct: 1347 EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKR 1406
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
AA + E+++ + P + YA++I+ + R A K+F M+ KG +V+ +
Sbjct: 1407 MLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCN 1466
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+M+ Y + G + +A+ ++ M+ GC P+ + Y +++ + + NL + +M +R
Sbjct: 1467 AMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKR 1526
Query: 499 KVTPDKVSYTTVISAYNRAREFD 521
K P+ V+Y+++I+ Y + + D
Sbjct: 1527 KCKPNVVTYSSLINGYCKTGDTD 1549
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 1/233 (0%)
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK-GMLRDPEVCLKLVLMYI 340
+ M G + +L+ ++A + A ++ + E+ G L + C +L+ + +
Sbjct: 1064 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLV 1123
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
E+ + + + M + +C +V G R +K+ E GCIP V
Sbjct: 1124 EQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVV 1183
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
Y +I+ YCR + + EM+ KGF +V Y S++ GK G + L +M
Sbjct: 1184 FYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM 1243
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ +G PNV IYNS++D + ++ Q + K+M PD +++ T+I+
Sbjct: 1244 RKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITG 1296
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%)
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
++Y +L L K A +M EK + D +YA+LI F + A ++F+
Sbjct: 1392 VNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 1451
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E KG+ D C ++ Y + G++ + + + +M+ + +++G++K+
Sbjct: 1452 FMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 1511
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A++ +I + C P VTY+S+IN YC+ AE +F MQ + VV Y+
Sbjct: 1512 NLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYT 1571
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
++ K ++ A M C PN
Sbjct: 1572 ILIGSLFKKDKVLRAGLYFETMLLNHCSPN 1601
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 148/375 (39%), Gaps = 30/375 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQE--LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
PD F + +HG++ + E + + E + P+ + +LI L + + +
Sbjct: 1355 PDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDV----NIYNVLISGLCKKRMLPA 1410
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMG 194
++ E+ NV PD + L+ +R+ A + + G +++ N+ +
Sbjct: 1411 AKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIK 1470
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
GY + M IL M+ G + D Y ++ Y K G+ AL C K
Sbjct: 1471 GYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLN--GALRWLCDMIKRKC 1528
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
P + Y L + K+G A F +M+ + + + Y LI S +V A
Sbjct: 1529 KP-NVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAG 1587
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
F+ ML + + L Y+ GL T V+ S+ C + + V+G
Sbjct: 1588 LYFET-----MLLNHCSPNDVTLHYLVNGLTSCTPCVINSI---------CCNTSEVHGK 1633
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
A + V+++L+ P Y +II + CR + +A M +KG+
Sbjct: 1634 D------ALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNP 1687
Query: 435 VAYSSMVAMYGKTGR 449
+ + S++ + G+
Sbjct: 1688 ITFLSLLYGFCSVGK 1702
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 209/488 (42%), Gaps = 40/488 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ +D+ + G+ K Q A E K+ RP+ T L++ Q D
Sbjct: 381 PNKIMYDNLIRGLCKIGQLGR-ASKLLKEMIKV-GLRPDTFTYNPLMQGHFQQHDKDGAF 438
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
L + + +LP+ ++ ++ + + K A LL+ I++G L N+
Sbjct: 439 ELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEG----LKPNA------ 488
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
MY I+ + K + + C+ +E K K + P
Sbjct: 489 --FMYAPLIIGHSKEGNISLA------CEALE------------------KMTKANVHP- 521
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
Y L L GR EA +++ ++++G++ D Y+ LI + ++ A++L
Sbjct: 522 DLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLL 581
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
++ G+ + + L+ Y + EK +++SM + K + I ++ S+
Sbjct: 582 RQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRS 641
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A V ++ G +P Y+S+I+ C+IA KA + EM ++G + +V Y
Sbjct: 642 ENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCY 701
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++++ + ++G I A + + AKG PN Y +L+D + + ++ L+KEM
Sbjct: 702 NALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLD 761
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
R + PD Y + + + A + + + F E N G + ++ +V F K +++E
Sbjct: 762 RGIAPDAFVYNVLATGCSDAADLEQAL-FLTEEMFNRGYANVSLFNTLVHGFCKRGKLQE 820
Query: 558 LVKLLQDM 565
KLL M
Sbjct: 821 TEKLLHVM 828
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/472 (20%), Positives = 206/472 (43%), Gaps = 6/472 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + L++ L+++ + + L + +LPD +T S + + +AR F A +
Sbjct: 206 PTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKV 265
Query: 175 L-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
++ D + + +N + G + E+M G+ D+ Y +M K
Sbjct: 266 FEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCK 325
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
++ AL E L + +Y L D K G+ EA ++M G+ +
Sbjct: 326 GSRLKEAKALLDEMSCSGLKP---NIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPN 382
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+Y +LI I ++ A +L KE + G+ D L+ + ++ + +++
Sbjct: 383 KIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLN 442
Query: 354 SMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
M+N+ + + + S I +NG + A + E++IS+G P YA +I + +
Sbjct: 443 EMRNSGI-LPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKE 501
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
S A + +M + + Y+S++ GR+ +A A+++ +G P+ + Y
Sbjct: 502 GNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTY 561
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+ L+ + + NL + ++L ++M + P+ +YT ++ Y ++ +++
Sbjct: 562 SGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLG 621
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+G D I GI++ S+ +E +L +++ G D +Y S ++ L
Sbjct: 622 SGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGL 673
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/499 (20%), Positives = 208/499 (41%), Gaps = 18/499 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE------FRPEKSTLKLLIRYLVQSK 131
PDA + + ++G+ K + +E AK L + +P L+ ++
Sbjct: 311 PDAFTYGALMNGLCKGSRLKE--------AKALLDEMSCSGLKPNIVVYGTLVDGFMKEG 362
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFN 190
K + ++ V P+ L+ + + A+ LL+ I G +N
Sbjct: 363 KTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYN 422
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
M G+ + H + +M+++GI+ + Y ++ + G+S++ L E S
Sbjct: 423 PLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISE 482
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
L F MY L K G A + M + + D Y SLI +++ +
Sbjct: 483 GLKPNAF---MYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRM 539
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
+ AEE + + +++G++ D L+ Y + G +EK ++ M N+ LK + +
Sbjct: 540 EEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDL 599
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+ G+ K Y + + ++ G P Y +I R A V E+++ G
Sbjct: 600 LEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGL 659
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+ YSS+++ K + A+ L+ +M +G EP + YN+L+D R+ ++ +
Sbjct: 660 VPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARN 719
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
++ + + + P+ V+YT +I + + Y E G D + ++ S
Sbjct: 720 VFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCS 779
Query: 551 KLSQIEELVKLLQDMKSEG 569
+ +E+ + L ++M + G
Sbjct: 780 DAADLEQALFLTEEMFNRG 798
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/457 (20%), Positives = 197/457 (43%), Gaps = 11/457 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD ++ + G + ++ A++ NE + P + ++I L Q+ +
Sbjct: 416 PDTFTYNPLMQGHFQQ-HDKDGAFELLNEMRN-SGILPNVYSYGIMINGLCQNGESKEAG 473
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA-NTLLQVFITDGEIALLAFNSAMGGY 196
+L E+ + P+A + L+ + +A L ++ + L +NS + G
Sbjct: 474 NLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGL 533
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + Y +++ G+V D Y ++ Y K G+ EK L + + L
Sbjct: 534 STVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKP-- 591
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y L + KS + + M G D IY +I + + +++A +
Sbjct: 592 -NADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMV 650
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC--AIVNGF 374
E E+ G++ D + L+ + +EK + +++ M AK + I C A+++GF
Sbjct: 651 LTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEM--AKEGLEPGIVCYNALIDGF 708
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+ A V++ ++++G +P VTY ++I+ C+ + A ++ EM +G
Sbjct: 709 CRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDA 768
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
Y+ + + A++L +M +G NV ++N+L+ + L++ EKL
Sbjct: 769 FVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHV 827
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
M R++ P+ + V+S + +A + + + E +
Sbjct: 828 MMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQ 864
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 110/563 (19%), Positives = 213/563 (37%), Gaps = 51/563 (9%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRP-----EKSTLKLLIRYLVQSK 131
+PD + +F+ K A D+ K E R + T ++I L +S
Sbjct: 240 LPDVYTYSTFIEAHCK-------ARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 292
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFN 190
+ E+ Y + PDA T L+ + + K A LL G + ++ +
Sbjct: 293 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYG 352
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ + G+ K + ++M SAG+ + Y ++ KIG + + L E
Sbjct: 353 TLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKV 412
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
L F+ Y L + A + +M+ GIL + Y +I E
Sbjct: 413 GLRPDTFT---YNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGES 469
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
K A L +E +G+ + + L++ + +EG + + +E M A + ++
Sbjct: 470 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSL 529
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+ G S A + Y Q+ +G +P + TY+ +I+ YC+ KA+++ +M G
Sbjct: 530 IKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGL 589
Query: 431 DKCVVAYSSMVAMYGKTGR--------------------------IRD---------AMW 455
Y+ ++ Y K+ IR+ A
Sbjct: 590 KPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFM 649
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
++ +++ G P++ IY+SL+ + ++ + L EM + + P V Y +I +
Sbjct: 650 VLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFC 709
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
R+ + ++ G V + ++ K I + L ++M G D
Sbjct: 710 RSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAF 769
Query: 576 LYHSAMNALRDAGLQMQAQWLQQ 598
+Y+ DA QA +L +
Sbjct: 770 VYNVLATGCSDAADLEQALFLTE 792
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 150/319 (47%), Gaps = 16/319 (5%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
++ + GY K + +M ++G+ ++ Y ++E Y+K D EKV+++ +
Sbjct: 561 YSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSIL---Q 617
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
S H+Y I+ +L +S A ++++ G++ D IY+SLI I
Sbjct: 618 SMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIA 677
Query: 309 E----VKLAEELFKEAEEKGMLRDPEVCLK-LVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ V L +E+ KE E G+ VC L+ + G + + +V +S+ AK +
Sbjct: 678 DMEKAVGLLDEMAKEGLEPGI-----VCYNALIDGFCRSGDISRARNVFDSIL-AKGLVP 731
Query: 364 DCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
+C++ A+++G K A +Y++++ +G P Y + A +A +
Sbjct: 732 NCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLT 791
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
EM +G+ V ++++V + K G++++ L+ M + PN ++ G+A
Sbjct: 792 EEMFNRGYAN-VSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKA 850
Query: 483 KNLRQVEKLWKEMERRKVT 501
L + +++ E++++K +
Sbjct: 851 GKLGEAHRVFAELQQKKAS 869
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 148/355 (41%), Gaps = 13/355 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD ++S + G+ + +E A +YY + +K P++ T LI ++ +
Sbjct: 521 PDLFCYNSLIKGLSTVGRMEE-AEEYYAQVQKR-GLVPDEFTYSGLIHGYCKTGNLEKAD 578
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
L + P+A T + L+ ++ ++ +++LQ + G+ + +
Sbjct: 579 QLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNL 638
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
++ +V +++ G+V D Y ++ KI D EK L E L+
Sbjct: 639 SRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEP-- 696
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---CSFASITEVKLA 313
Y L D +SG A F + KG++ + Y +LI C IT+ A
Sbjct: 697 -GIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITD---A 752
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+L+KE ++G+ D V L + +E+ L + E M N + +V+G
Sbjct: 753 FDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFN-TLVHG 811
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
F KR K+ ++ + +P T +++ + + +A +VF E+QQK
Sbjct: 812 FCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQK 866
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%)
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
+V Y KTG +R+A +V M G P N L+ RA + + KL ME
Sbjct: 179 LVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAG 238
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ PD +Y+T I A+ +AR+FD K + E R ++ +M+ + +EE
Sbjct: 239 ILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 298
Query: 560 KLLQDMKSEGTKLDERLYHSAMNAL 584
++M G D Y + MN L
Sbjct: 299 GFKEEMVDYGLSPDAFTYGALMNGL 323
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 452 DAMWLVAKMKA----KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
DAM L+ K+K G P+V+ Y++ ++ H +A++ +K+++EM RR ++V+Y
Sbjct: 222 DAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTY 281
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+IS R+ + F E G D G ++ K S+++E LL +M
Sbjct: 282 NVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSC 341
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQA 593
G K + +Y + ++ G +A
Sbjct: 342 SGLKPNIVVYGTLVDGFMKEGKTAEA 367
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 168/341 (49%), Gaps = 4/341 (1%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--CSFASITEVKLAEE 315
+ + + L + G+SG EA+ F MKE G+ + Y ++I C + E K +
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM-EFKQVAK 325
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
F E + G+ D L+ + GL E ++ + M N +++ +++
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A ++ Q+ + +P V+Y+++I+ + + + +A +F EM+ G V
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+Y++++++Y K GR +A+ ++ +M + G + +V YN+L+ +G+ +V+K++ EM
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+R V P+ ++Y+T+I Y++ + ++ + EF+ G D + ++ K +
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNAL-RDAGLQMQAQW 595
V L+ +M EG + Y+S ++A R A + A +
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 146/301 (48%), Gaps = 4/301 (1%)
Query: 186 LLAFNSAMGGYNKLHMYYSTIL-VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
L+ +N+ + K M + + +++M+ G+ D + ++ + G E LF
Sbjct: 303 LVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 362
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E +R+++ FS Y L D++ K G+ A + M K I+ + Y+++I F
Sbjct: 363 DEMTNRRIEQDVFS---YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGF 419
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
A A LF E G+ D L+ +Y + G E+ LD++ M + +K
Sbjct: 420 AKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV 479
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
A++ G+ K+ Y KV+ ++ + +P +TY+++I+ Y + LY +A ++F E
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+ G VV YS+++ K G + A+ L+ +M +G PNV YNS++D GR+
Sbjct: 540 FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT 599
Query: 485 L 485
+
Sbjct: 600 M 600
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 168/370 (45%), Gaps = 8/370 (2%)
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF--FRDMKEKGILE 292
GD E +L L +S KL + T++ + LG +A+ F F +E+ E
Sbjct: 177 GDDEMFHSLMLSFES-KLCGSDDCTYIIR----ELGNRNECDKAVGFYEFAVKRERRKNE 231
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ +++I + +V +A+ +F+ A G L+ Y GL E+ + V
Sbjct: 232 QGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVF 291
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAV-KVYEQLISQGCIPGQVTYASIINAYCR 411
SMK L+ + A+++ K + V K ++++ G P ++T+ S++ R
Sbjct: 292 NSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
L+ A +F EM + ++ V +Y++++ K G++ A ++A+M K PNV
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y++++D +A + L+ EM + D+VSY T++S Y + + + E
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
G D ++G + K + +E+ K+ +MK E + Y + ++ GL
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 592 QAQWLQQNFE 601
+A + + F+
Sbjct: 532 EAMEIFREFK 541
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 185/412 (44%), Gaps = 48/412 (11%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKIL 265
V+ M G+ + Y I+ GD EK RK++ S ++ Y L
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFM-----RKMEKEGISPNVVTYNTL 248
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---CSFASITEVKLAEELFKEAEE 322
D+ K + EA+ R M G+ + Y S+I C ++EV EL +E
Sbjct: 249 IDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVG---ELVEEMRG 305
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
KG++ D LV + +EG + + L ++ M L + ++N K
Sbjct: 306 KGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSR 365
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
AV++++Q+ +G P + TY ++I+ +C+ L ++A KV EM GF VV Y+++V
Sbjct: 366 AVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVH 425
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ--------VEK---- 490
Y GR+++A+ ++ M +G P+V Y++++ R + L + VEK
Sbjct: 426 GYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLP 485
Query: 491 -----------------------LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
L++EM RR + PD+V+YT++I+AY E ++ +
Sbjct: 486 DTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLH 545
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+E G + D +++ +K ++ + +LL + E + D+ Y++
Sbjct: 546 DEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNT 597
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 198/447 (44%), Gaps = 25/447 (5%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR--------PEKSTLKLLIRYLVQ 129
P +++ L +L+ + YD +A+++ FR P T ++IR +V
Sbjct: 165 PTVLSYNAVLDALLRRSSSNHRDYD---DAERV--FRDMVRNGVSPNVYTYNVIIRGVVS 219
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLA 188
+ + + + P+ T + L+ + + +K K A LL+ G A L++
Sbjct: 220 QGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLIS 279
Query: 189 FNSAMGGY-NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+NS + G K M LV E+M+ G+V D Y ++ + K G+ + L E
Sbjct: 280 YNSVINGLCGKGRMSEVGELV-EEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEM 338
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+ L + Y L + + K+G A++ F M+ +G+ + Y +LI F
Sbjct: 339 VGKGLSPNVVT---YTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQK 395
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ A ++ E G P V LV Y G V++ + ++ M L D
Sbjct: 396 GLMNEAYKVLSEMIVSGF--SPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLP-PDV 452
Query: 366 IS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+S ++ GF + R A ++ E+++ +G +P VTY+S+I C +A +F E
Sbjct: 453 VSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFRE 512
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M ++G V Y+S++ Y G + A+ L +M +G P+ Y+ L++ +
Sbjct: 513 MMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKAR 572
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVI 511
+ ++L ++ + PD V+Y T+I
Sbjct: 573 TKVAKRLLLKLFYEESVPDDVTYNTLI 599
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 165/367 (44%), Gaps = 29/367 (7%)
Query: 252 LDSTPFSTH-MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
L S+PFS+ ++ ++ SL + G +AL G +A + S+ ++ +
Sbjct: 124 LCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHG-------FAPTVLSYNAVLDA 176
Query: 311 KL------------AEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMK 356
L AE +F++ G+ P V V++ + +G +EK L + M+
Sbjct: 177 LLRRSSSNHRDYDDAERVFRDMVRNGV--SPNVYTYNVIIRGVVSQGDLEKGLGFMRKME 234
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ + +++ K++ A+ + + G ++Y S+IN C S
Sbjct: 235 KEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMS 294
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ ++ EM+ KG V Y+++V + K G + + L+++M KG PNV Y +L+
Sbjct: 295 EVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLI 354
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+ +A NL + +++ +M R + P++ +YTT+I + + + K +E ++G
Sbjct: 355 NCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFS 414
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL---RDAG--LQM 591
+V + L +++E V +L+ M G D Y + + R+ G QM
Sbjct: 415 PSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQM 474
Query: 592 QAQWLQQ 598
+ + +++
Sbjct: 475 KEEMVEK 481
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/536 (22%), Positives = 225/536 (41%), Gaps = 28/536 (5%)
Query: 62 FPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLK 121
F + L R+ ++ PD +++ ++G+ K + +E A E + F P T
Sbjct: 15 FEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKE-AVGLLLEMEAAGCF-PNSVTCT 72
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
L+ L + + D + L E K D L++ L +
Sbjct: 73 TLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGK 132
Query: 182 GEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G A ++ ++ + G +L + V M GI D Y +++ K D
Sbjct: 133 GISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCK--DGRAT 190
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
A+ L + P S Y +L L K G +A K R M EKG D Y +L
Sbjct: 191 HAMDLLNLMVEKGEEP-SNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 249
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK--------LVLMYIEEGLVEKTLDVV 352
+ +V A +LF + D E CL+ L+ +EG + K + +
Sbjct: 250 MKGLCDKGKVDEALKLFNS------MFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 303
Query: 353 ESMKNAKLKISDCISCAIVN----GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
M +K C + N G K A+++++Q++ G +P TY+ +I+
Sbjct: 304 RKM----VKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDG 359
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+C++ + + A+ +F EM+ G + + Y++++A K G + A L +M CEP+
Sbjct: 360 FCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPD 419
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ +N+++D +A + + V++L +M + PD ++++T+I+ ++ E D
Sbjct: 420 IISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALE 479
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+G D + ++ S E++ LL M ++GT LD ++ + + L
Sbjct: 480 RMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCL 535
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 147/327 (44%), Gaps = 2/327 (0%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
I+ L ++G FEA+ R+M K + D Y +LI ++K A L E E
Sbjct: 3 IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAA 62
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G + C L+ ++G +++ ++++E+MK + +++GF
Sbjct: 63 GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 122
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+++++++ +G VTY+ +++ CR+ + +A V M + G VV Y+ ++
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K GR AM L+ M KG EP+ YN L+ + + K+ + M + D
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 242
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI--AGIMVGVFSKLSQIEELVKL 561
V+Y T++ + D +K +N N ++ + +++G K ++ + VK+
Sbjct: 243 VVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKI 302
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAG 588
+ M +G+ + Y+ + AG
Sbjct: 303 HRKMVKKGSCGNLVTYNMLLGGCLKAG 329
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 203/487 (41%), Gaps = 26/487 (5%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ + LI L ++KK V L + + P++ TC+ L+ + + A L
Sbjct: 31 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 90
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ G + ++ + + + G+ ++++M GI + Y ++ +
Sbjct: 91 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 150
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G ++ + + + Y L D L K GRA A+ M EKG E+
Sbjct: 151 LGQWKEANTVLNAMAEHGIHPDVVT---YTGLIDGLCKDGRATHAMDLLNLMVEKG--EE 205
Query: 294 PS--IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
PS Y L+ V A ++ + EKG D L+ ++G V++ L +
Sbjct: 206 PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL 265
Query: 352 VESMKNAKLKISDCISCAI------VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
SM + + +C+ + + G K AVK++ +++ +G VTY +
Sbjct: 266 FNSMFDNE----NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNML 321
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
+ + +A +++ ++ GF YS ++ + K + A L +M+ G
Sbjct: 322 LGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGL 381
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
P ++ YN+LM + +L Q + L++EM PD +S+ T+I +A +F +
Sbjct: 382 NPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDF----Q 437
Query: 526 FYNEFRMN----GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
F E +M G D ++ SKL +++E L+ M + G D +Y S +
Sbjct: 438 FVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLL 497
Query: 582 NALRDAG 588
L G
Sbjct: 498 KGLSSKG 504
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 209/492 (42%), Gaps = 53/492 (10%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTI 206
+ P TC+ L++S V+A + K + + G I + F++ + + K H I
Sbjct: 217 LFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAI 276
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGD------------SEKVA------ALFLE-- 246
++ KM+ G+ + Y I+ K G EKV+ ++F+
Sbjct: 277 GLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGL 336
Query: 247 ----------CKSRKLDSTPFSTH--MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
C +++ F + +Y L D K G EALK DM KGI +
Sbjct: 337 IKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNS 396
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE--------VCLKLVLMYIEEGLVE 346
SLI F ++ AE + +E +G+ + +CLK +
Sbjct: 397 VTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFV-------- 448
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
L + M L+ +D + +V+G K AV+++ +L+ +G +P VT ++I
Sbjct: 449 TALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALI 508
Query: 407 NAYCRIALYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+ C+ + K+ +M ++G FD+ + Y+++++ K G++++ L +M KG
Sbjct: 509 HGLCKAGNMQETLKLLRDMLERGLVFDR--ITYNTLISGCCKEGKVKEGFELKEEMVKKG 566
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+P+++ +N L+ A + + +LW E ++ P+ +Y +I Y +A + +
Sbjct: 567 IQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGE 626
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
NE ++ + ++ + + +L DMKS G L Y S M+ L
Sbjct: 627 NLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGL 686
Query: 585 RDAGLQMQAQWL 596
+ GL A+ L
Sbjct: 687 CNIGLVDDAKHL 698
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 115/545 (21%), Positives = 219/545 (40%), Gaps = 35/545 (6%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+PD F + ++ K + + A +++ +KL P T +I L +S + D
Sbjct: 253 IPDVHLFSTMINAFCKGHREDD-AIGLFSKMEKLG-VAPNVVTYNNIIHGLCKSGRLDEA 310
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
E V P T S + ++ K AN +L+ G + + +N+ + G
Sbjct: 311 YRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDG 370
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK---IGDSEKV------------ 240
Y K+ + + + M S GI +S +++ + K IG +E V
Sbjct: 371 YCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPIN 430
Query: 241 ------AALFLECKSRKLDSTPFSTHMY-----------KILCDSLGKSGRAFEALKFFR 283
+L K R + + F M L L K+G+ EA++ +
Sbjct: 431 QGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWC 490
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+ KG + + +LI ++ +L ++ E+G++ D L+ +EG
Sbjct: 491 RLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEG 550
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
V++ ++ E M ++ +++G A +++ + G +P TY
Sbjct: 551 KVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYG 610
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
+I+ YC+ + E + E+ K + V Y+S++ Y G + A L MK++
Sbjct: 611 VMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSR 670
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
G + Y+SLM + + L EM + + P+ V YTT+I Y++ + +
Sbjct: 671 GVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKV 730
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
E + ++ IM+ F KL + +E KLL +M +G D Y++ N
Sbjct: 731 NIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNG 790
Query: 584 LRDAG 588
L G
Sbjct: 791 LCKEG 795
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 114/542 (21%), Positives = 216/542 (39%), Gaps = 41/542 (7%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ +++ +HG+ K + E AY + + K + P T + I L++ +K D
Sbjct: 289 PNVVTYNNIIHGLCKSGRLDE-AYRFKEKMVK-EKVSPSLITYSVFINGLIKLEKIDEAN 346
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVR----ARKFKIANTLLQVFITDGEIALLAFNSAM 193
+ ++ +P+ + L+ + + KI + +L I+ + L NS +
Sbjct: 347 CVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTL---NSLI 403
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME----------AYYKI--------- 234
G+ K V E+M G+ ++ G + ++ A + I
Sbjct: 404 QGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLR 463
Query: 235 -GDSEKVAALFLECKSRK----------LDSTPFSTHMY--KILCDSLGKSGRAFEALKF 281
D + CK+ K L F ++ L L K+G E LK
Sbjct: 464 PNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKL 523
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
RDM E+G++ D Y +LI +VK EL +E +KG+ D L+
Sbjct: 524 LRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCN 583
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
+++ + K + +++G+ K + +L+S+ V
Sbjct: 584 ADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVV 643
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y S+I AYC + A ++ +M+ +G YSS++ G + DA L+ +M+
Sbjct: 644 YNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMR 703
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
+G PNV Y +++ + + + +V + +EM + P+K +YT +I + + +
Sbjct: 704 KEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTK 763
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
K NE G + D K ++EE K+ +M S LDE Y + +
Sbjct: 764 EAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823
Query: 582 NA 583
+
Sbjct: 824 DG 825
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 91/194 (46%)
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K G+ A V+ L +G P T ++++ + K+ +V+ + G V
Sbjct: 198 KHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVH 257
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+S+M+ + K R DA+ L +KM+ G PNV YN+++ ++ L + + ++M
Sbjct: 258 LFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKM 317
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ KV+P ++Y+ I+ + + D E G V + + ++ + K+ I
Sbjct: 318 VKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNI 377
Query: 556 EELVKLLQDMKSEG 569
E +K+ DM S+G
Sbjct: 378 SEALKIRDDMLSKG 391
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 182/415 (43%), Gaps = 13/415 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ F + M G + + + ++M G+ + Y I++ K+GD+ V+AL L
Sbjct: 182 VVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT--VSALNL 239
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
K ++ + +Y + D L K GR +A F +M+EK I D Y +I F
Sbjct: 240 LRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFC 299
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
AE+L +E E+ + D L+ +++EG + ++ + M + S
Sbjct: 300 ISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTV 359
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++++GF K+ AA ++ ++GC P +T+ ++I YCR K+ EM
Sbjct: 360 TYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 419
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+ G + Y++++ + + G + A L+ +M + G PNV N+L+D L
Sbjct: 420 TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKL 479
Query: 486 RQVEKLWKEMERRK-----------VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+ +++K M++ K V PD +Y +I +F + Y E G
Sbjct: 480 KDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRG 539
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
V D M+ K S+++E ++ M S+ D +++ + AG+
Sbjct: 540 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGM 594
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/482 (19%), Positives = 207/482 (42%), Gaps = 74/482 (15%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P+ +++ + G+ KD + + A++ + E ++ E P+ T +I S +W
Sbjct: 250 IPNVVIYNTIIDGLWKDGRHSD-AHNLFIEMQE-KEIFPDIVTYNCMINGFCISGRWSDA 307
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGG 195
L ++ + PD T S L+ + V+ KF A L + I + + ++S + G
Sbjct: 308 EQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDG 367
Query: 196 Y---NKL----HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+ N+L HM+Y T + G D + ++ Y C+
Sbjct: 368 FCKQNRLDAAEHMFYLT-------PTKGCSPDIITFNTLIAGY---------------CR 405
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
++++D + +K +M E G++ + Y +LI F +
Sbjct: 406 AKRVD-----------------------DGIKLLHEMTEAGLVANTITYTTLIHGFCQVG 442
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS----- 363
++ A++L +E G+ + C L+ + G ++ L++ ++M+ +K+ I
Sbjct: 443 DLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPF 502
Query: 364 ----------DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+ + C ++N + A ++YE++ +G +P +TY+S+I+ C+ +
Sbjct: 503 NGVEPDVQTYNILICGLIN----EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 558
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+A ++F M K F VV +++++ Y K G + D + L +M +G + Y
Sbjct: 559 RLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYI 618
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+L+ + N+ +++EM V PD ++ +++ E + V + +M+
Sbjct: 619 TLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQMS 678
Query: 534 GG 535
G
Sbjct: 679 VG 680
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 163/379 (43%), Gaps = 14/379 (3%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
+C++M ++G + V +L K ++ P + + + IL + AL F
Sbjct: 84 FCKLMGVVVRMGRPDVVISLH---KKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFG 140
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIE 341
+ + G + +L+ + A +LF + + P V LM
Sbjct: 141 KITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQ------MCKPNVVTFTTLMNGLCR 194
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL--ISQGCIPGQ 399
EG V + + +++ M L+ + IV+G K +A+ + ++ +S IP
Sbjct: 195 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSH-IIPNV 253
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
V Y +II+ + +S A +FIEMQ+K +V Y+ M+ + +GR DA L+ +
Sbjct: 254 VIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQE 313
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M + P+V +++L++ + + E+L+ EM R + P V+Y+++I + +
Sbjct: 314 MLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNR 373
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
D + G D ++ + + ++++ +KLL +M G + Y +
Sbjct: 374 LDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 433
Query: 580 AMNALRDAGLQMQAQWLQQ 598
++ G AQ L Q
Sbjct: 434 LIHGFCQVGDLNAAQDLLQ 452
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 173/366 (47%), Gaps = 14/366 (3%)
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF- 276
+LD Y I+ AY + G EK LF K ++ +P + Y ++ D GK GR++
Sbjct: 207 LLDVRAYTTILHAYSRTGKYEKAIDLFERMK--EMGPSP-TLVTYNVILDVFGKMGRSWR 263
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+ L +M+ KG+ D ++++ + A ++ A+E F E + G L+
Sbjct: 264 KILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALL 323
Query: 337 LMYIEEGLVEKTLDVVESMKNAK-----LKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
++ + G+ + L V++ M+ + ++ ++ + GFSK A V E +
Sbjct: 324 QVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKE-----AAGVIEMMT 378
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+G +P +TY ++I+AY + +A K+F M++ G Y++++++ GK R
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSN 438
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+ + ++ MK+ GC PN +N+++ + G + V ++++EM+ PD+ ++ T+I
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLI 498
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
SAY R K Y E G ++ ++ ++ DMKS+G K
Sbjct: 499 SAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFK 558
Query: 572 LDERLY 577
E Y
Sbjct: 559 PTETSY 564
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/523 (20%), Positives = 221/523 (42%), Gaps = 40/523 (7%)
Query: 116 EKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL 175
+ +++ +R L + ++ L + + L D + ++ + R K++ A L
Sbjct: 174 DHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLF 233
Query: 176 QVFITDG-EIALLAFNSAMGGYNKLHMYYSTIL-VYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ G L+ +N + + K+ + IL V ++M+S G+ D ++ A +
Sbjct: 234 ERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAR 293
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G + F E KS + T Y L GK+G EAL ++M+E D
Sbjct: 294 EGLLREAKEFFAELKSCGYEP---GTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPAD 350
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y L+ ++ K A + + +KG++ + ++ Y + G ++ L +
Sbjct: 351 SVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFY 410
Query: 354 SMKNAKLKISDCISCAIV---------------------NGFSKRRGYWAAV-------- 384
SMK A + C A++ NG S R W +
Sbjct: 411 SMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKG 470
Query: 385 ------KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+V+ ++ S G P + T+ ++I+AY R A K++ EM + GF+ CV Y+
Sbjct: 471 MDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYN 530
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ + G R +++ MK+KG +P Y+ ++ + + N +E++ ++
Sbjct: 531 ALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEG 590
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
++ P + T++ A + R + + F+ +G D I M+ +F++ + ++
Sbjct: 591 QIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQA 650
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+L+ ++ +G D Y+S M+ G +A+ + + E
Sbjct: 651 EGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 105/533 (19%), Positives = 209/533 (39%), Gaps = 77/533 (14%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ-SKK 132
Q + D + + + LH + + E A D + K++ P T +++ + +
Sbjct: 204 QEYLLDVRAYTTILHAYSRTGK-YEKAIDLFERMKEMGP-SPTLVTYNVILDVFGKMGRS 261
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA-------------------NT 173
W I+ + ++ + + D TCS ++++C R + A N
Sbjct: 262 WRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNA 321
Query: 174 LLQVFITDG----EIALL-------------AFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
LLQVF G +++L +N + Y + V E M G
Sbjct: 322 LLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG 381
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
++ ++ Y +++AY K G ++ LF K + P +T Y + LGK R+
Sbjct: 382 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMK--EAGCVP-NTCTYNAVLSLLGKKSRSN 438
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
E +K DMK G + + + +++ + K +F+E + G D + L+
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLI 498
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
Y G + M A A++N +++ + + V + S+G
Sbjct: 499 SAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFK 558
Query: 397 PGQVTYASIINAYCRIALY-----------------------------------SKAEKV 421
P + +Y+ ++ Y + Y + +E+
Sbjct: 559 PTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERA 618
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F ++ G+ +V ++SM++++ + A ++ ++ G P++ YNSLMDM+ R
Sbjct: 619 FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 678
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+ E++ K +E+ ++ PD VSY TVI + R V+ +E G
Sbjct: 679 RGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 125/310 (40%), Gaps = 71/310 (22%)
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+V S + LK+ + V + Y A K+ +++ Q + Y +I++AY
Sbjct: 162 LVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYS 221
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR--------------------- 449
R Y KA +F M++ G +V Y+ ++ ++GK GR
Sbjct: 222 RTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDE 281
Query: 450 ---------------IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+R+A A++K+ G EP YN+L+ + G+A + + KE
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341
Query: 495 ME-----------------------------------RRKVTPDKVSYTTVISAYNRARE 519
ME ++ V P+ ++YTTVI AY +A +
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGK 401
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
D +K + + G V + ++ + K S+ E++K+L DMKS G + +++
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT 461
Query: 580 AMNALRDAGL 589
+ + G+
Sbjct: 462 MLALCGNKGM 471
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/324 (18%), Positives = 142/324 (43%), Gaps = 3/324 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ +MKS G D + ++ AY + G + ++ E ++ Y L +
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNAC---VTTYNALLN 534
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+L + G DMK KG + Y+ ++ +A E + +E +
Sbjct: 535 ALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFP 594
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ L+L + + + K K I ++++ F++ Y A +
Sbjct: 595 SWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGIL 654
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
E + G P VTY S+++ Y R KAE++ +++ +V+Y++++ + +
Sbjct: 655 ESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRR 714
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G +++A+ ++++M +G P ++ YN+ + + ++E + + M + P+++++
Sbjct: 715 GLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTF 774
Query: 508 TTVISAYNRAREFDMCVKFYNEFR 531
V+ Y RA ++ + F ++ +
Sbjct: 775 KMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 66/141 (46%), Gaps = 1/141 (0%)
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
WLV + + + + + + GR KL ++ ++ D +YTT++ AY
Sbjct: 161 WLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAY 220
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI-EELVKLLQDMKSEGTKLD 573
+R +++ + + + G +++ VF K+ + +++ +L +M+S+G K D
Sbjct: 221 SRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFD 280
Query: 574 ERLYHSAMNALRDAGLQMQAQ 594
E + ++A GL +A+
Sbjct: 281 EFTCSTVLSACAREGLLREAK 301
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/512 (21%), Positives = 219/512 (42%), Gaps = 9/512 (1%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VP+A +++ + + D ++QE AK+ P+ + +I + +
Sbjct: 224 VPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKA 283
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+L + V PD T + +V + +AR A +L+ + G E L + + + G
Sbjct: 284 CNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHG 343
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLD 253
Y+ + + ++ KM S G++ + M + K G S+ +F + K D
Sbjct: 344 YSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPD 403
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
Y IL GR + F M +KGI+ + + LI + A + A
Sbjct: 404 LVS-----YSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEA 458
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+F E + +G+ D L+ + G + ++ M + L+ + + ++++G
Sbjct: 459 MLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHG 518
Query: 374 FSKRRGYWAAVKVYEQLISQGCI-PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
F A ++ +++S+G P V ++SII++ C A VF + G
Sbjct: 519 FCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRP 578
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+V ++S++ Y G++ A ++ M + G EP+V YN+L+ + ++ + L+
Sbjct: 579 TIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILF 638
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+EM +KV P V+Y+ V+ A K ++E +G +D I++ +
Sbjct: 639 REMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRN 698
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+E + L + + K D + ++ +NAL
Sbjct: 699 DLTDEAITLFHKLGAMDCKFDITILNTVINAL 730
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 117/563 (20%), Positives = 222/563 (39%), Gaps = 42/563 (7%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F++ +HG K + + A + NE + P+ T ++ L +++ D
Sbjct: 262 PDVVSFNTVIHGFFKQGEVSK-ACNLINEMVQ-KGVEPDVVTYNSIVDALCKARAMDKAE 319
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGY 196
+ V PD T + ++ + +K + + + + G I ++ FNS M
Sbjct: 320 LVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSL 379
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K +++ M + G + D Y ++ Y G + LF + + +
Sbjct: 380 CKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVA-- 437
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ H + IL + K G EA+ F +M+ +G+ D Y++LI +F + + A E
Sbjct: 438 -NCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEK 496
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFS 375
F + G+ + V L+ + G + K ++V M + + + + +I++
Sbjct: 497 FSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLC 556
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
A V+ +I G P VT+ S+I+ YC + KA V M G + VV
Sbjct: 557 NEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVV 616
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+++V+ Y K+G+I D + L +M K +P Y+ ++D A +K++ EM
Sbjct: 617 TYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEM 676
Query: 496 ERRKVTPDKVSY-----------------------------------TTVISAYNRAREF 520
D +Y TVI+A + R
Sbjct: 677 IDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRR 736
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ + +G V + + G+M+ K +EE + M+ G RL +
Sbjct: 737 EEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDI 796
Query: 581 MNALRDAGLQMQAQWLQQNFEGT 603
+ L G ++A + +GT
Sbjct: 797 IRMLLQKGDIVKAGYYMSKVDGT 819
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 151/337 (44%), Gaps = 13/337 (3%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE---DPSIYASLICSFASITEVKL 312
P S H Y IL D ++ R FF + G+ + + + +C E
Sbjct: 153 PLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEA-- 210
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS-DCIS-CAI 370
+ L + G + + ++ + ++ LD+V+ M + S D +S +
Sbjct: 211 VDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 270
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++GF K+ A + +++ +G P VTY SI++A C+ KAE V +M KG
Sbjct: 271 IHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGV 330
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM---HGRAKNLRQ 487
+ + Y++++ Y +G +++ + KM +KG P + +NS M HGR+K+
Sbjct: 331 EPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKD--- 387
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
E++++ M + PD VSY+ ++ Y F ++ G V + I++
Sbjct: 388 AEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILIS 447
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+K ++E + + +M+ +G + D Y + ++A
Sbjct: 448 AHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAF 484
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 90/454 (19%), Positives = 178/454 (39%), Gaps = 46/454 (10%)
Query: 149 LPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTIL 207
+PD + S L+ +F N L G +A FN + + K M +L
Sbjct: 401 MPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAML 460
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ +M+ G+ D Y ++ A+ ++G F + S L+ +T +Y L
Sbjct: 461 VFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEP---NTVVYHSLIH 517
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAEELF-------- 317
G +A + +M KGI P+I ++S+I S + V A ++F
Sbjct: 518 GFCMHGDLVKAKELVSEMMSKGI-PRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGD 576
Query: 318 ------------------KEAEEKGMLR-------DPEVCL--KLVLMYIEEGLVEKTLD 350
K + G+L +P+V LV Y + G ++ L
Sbjct: 577 RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLI 636
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ M + K+K + +++G AA K++ ++I G TY ++ C
Sbjct: 637 LFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC 696
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
R L +A +F ++ + ++++ K R +A L A + G PNV
Sbjct: 697 RNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVS 756
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
Y ++ + ++ + + ++ ME+ P +I ++ D+ Y
Sbjct: 757 TYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRML--LQKGDIVKAGYYMS 814
Query: 531 RMNGGVI--DRAIAGIMVGVFSKLSQIEELVKLL 562
+++G +I + + +++ +FS + E +K L
Sbjct: 815 KVDGTIISLEASTTSLLMSLFSSKGKHREQIKFL 848
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 81/193 (41%), Gaps = 7/193 (3%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM-WLVAK 459
TY +++ CR F + + G + ++ + R +A+ L+ +
Sbjct: 158 TYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHR 217
Query: 460 MKAKGCEPNVWIYNSLM-DMHGRAKN---LRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
M GC PN YN+++ + G +++ L V+++ KE R +PD VS+ TVI +
Sbjct: 218 MSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGR--CSPDVVSFNTVIHGFF 275
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+ E NE G D +V K +++ +L+ M +G + D
Sbjct: 276 KQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGL 335
Query: 576 LYHSAMNALRDAG 588
Y + ++ +G
Sbjct: 336 TYTAIIHGYSCSG 348
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 151/345 (43%), Gaps = 8/345 (2%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y + D K G +A + +D KG D Y SL+ F + A +FK+
Sbjct: 403 YNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGL 462
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
KG+ V L+ ++GL+ L ++ M K I+NG K
Sbjct: 463 GKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLS 522
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A + I++GCIP TY ++++ YCR A ++ M +G V+ Y++++
Sbjct: 523 DANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLL 582
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
KT + + M + M KGC PN+ YN++++ +K + + L EM+ + +T
Sbjct: 583 NGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLT 642
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID----RAIAGIMVGVFSKLSQIEE 557
PD VS+ T+I+ + + + D Y FR D A I++ FS+ ++
Sbjct: 643 PDVVSFGTLITGFCKVGDLD---GAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKM 699
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA-QWLQQNFE 601
++L +MK G D Y ++ G Q ++L +N E
Sbjct: 700 ALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIE 744
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/494 (20%), Positives = 201/494 (40%), Gaps = 42/494 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F+ +H + K E + K+ P T + I+ L + D V
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKR--GVCPNLFTFNIFIQGLCKEGSLDRAV 350
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L + PD T + ++ R + A L + G E +NS + GY
Sbjct: 351 RLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGY 410
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K M + + G D YC ++ + + GD ++ A+F + + L
Sbjct: 411 CKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRP-- 468
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
S +Y L L + G AL+ +M EKG D Y +I + + A L
Sbjct: 469 -SIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHL 527
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+A KG C+ + Y +V+G+ +
Sbjct: 528 IGDAITKG-------CIPDIFTYN----------------------------TLVDGYCR 552
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ +A+++ ++ SQG P +TY +++N C+ A + ++F M +KG ++
Sbjct: 553 QLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIIT 612
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++++ + ++ +A+ L+ +MK+KG P+V + +L+ + +L L++ ME
Sbjct: 613 YNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGME 672
Query: 497 RR-KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
++ V+ +Y +ISA++ M ++ ++E + NG D +++ F K +
Sbjct: 673 KQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNV 732
Query: 556 EELVKLLQDMKSEG 569
+ K L + +G
Sbjct: 733 NQGYKFLLENIEKG 746
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/433 (20%), Positives = 171/433 (39%), Gaps = 67/433 (15%)
Query: 203 YSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF---LEC------------ 247
Y+ + + M G ++ YC ++ +Y+ GD+++ LF LEC
Sbjct: 242 YAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKL 301
Query: 248 ------KSRKLDSTPF-----------STHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K L+S + + I L K G A++ + +G+
Sbjct: 302 VHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGL 361
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
D Y ++IC + V AEE + G + ++ Y ++G+V
Sbjct: 362 RPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANR 421
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKR---------------RGYWAAVKVYEQLI---- 391
+++ K + C++VNGF + +G ++ VY LI
Sbjct: 422 ILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLC 481
Query: 392 ----------------SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+GC P TY IIN C++ S A + + KG +
Sbjct: 482 QQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIF 541
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+++V Y + ++ A+ LV +M ++G P+V YN+L++ + +V +++K M
Sbjct: 542 TYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAM 601
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ P+ ++Y T+I + +++ + V E + G D G ++ F K+ +
Sbjct: 602 TEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDL 661
Query: 556 EELVKLLQDMKSE 568
+ L + M+ +
Sbjct: 662 DGAYGLFRGMEKQ 674
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 157/364 (43%), Gaps = 11/364 (3%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y IM + G + +++ K +K++S ++ Y I S ++GR + AL+ R
Sbjct: 193 YNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYT---YTIRIKSFCRTGRPYAALRLLR 249
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+M G + Y +++ F + A ELF E E + D KLV ++G
Sbjct: 250 NMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKG 309
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVN----GFSKRRGYWAAVKVYEQLISQGCIPGQ 399
V ++ E + + LK C + N G K AV++ + +G P
Sbjct: 310 FVLES----ERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDV 365
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
VTY ++I CR + +AE+ +M GF+ Y+S++ Y K G + DA ++
Sbjct: 366 VTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKD 425
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
KG +P+ + Y SL++ + + Q ++K+ + + P + Y T+I +
Sbjct: 426 AVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGL 485
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
++ NE G D +++ K+ + + L+ D ++G D Y++
Sbjct: 486 ILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNT 545
Query: 580 AMNA 583
++
Sbjct: 546 LVDG 549
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 159/401 (39%), Gaps = 40/401 (9%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
+D+ + PD + S ++G +D + + + K RP LI+ L
Sbjct: 424 KDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGK--GLRPSIIVYNTLIKGLC 481
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LL 187
Q + L + PD T + ++ + AN L+ IT G I +
Sbjct: 482 QQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIF 541
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+N+ + GY + S I + +M S G+ D Y ++ K SE+V +F
Sbjct: 542 TYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIF--- 598
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
K+ + Y + +SL S + EA+ +MK KG+ D + +LI F +
Sbjct: 599 KAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKV 658
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++ A LF+ GM EK DV + +
Sbjct: 659 GDLDGAYGLFR-----GM--------------------EKQYDVSHTTATYNI------- 686
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
I++ FS++ A++++ ++ GC P TY +I+ +C+ ++ K +E +
Sbjct: 687 --IISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIE 744
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
KGF + + ++ ++++A+ ++ M K P+
Sbjct: 745 KGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD 785
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/490 (21%), Positives = 211/490 (43%), Gaps = 12/490 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P++ + + ++G+ + + E A D E + P T + I L + D +
Sbjct: 265 PNSVTYSTLINGLCNEGRIGE-AMDMLEEMTE-KGIEPTVYTYTVPISSLCDIGRVDDAI 322
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+L P T + +++ RA K ++A + + +G + + +N+ +
Sbjct: 323 NLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINEL 382
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + +++ M+ G + ++ Y QI++ + + D EK +F ++ L P
Sbjct: 383 CTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVF----NKMLKDGP 438
Query: 257 FSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
T + Y L K G A +F MKE D Y LI F ++ A
Sbjct: 439 SPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATS 498
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
F E + G+ + ++ Y +EG ++ L + E M+ S AI++G S
Sbjct: 499 FFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLS 558
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K + A K ++ QG P +TY S+IN C+ + A K+F EM++K
Sbjct: 559 KGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAH 618
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+S++ + G++ A ++ GCEP + Y++L+ R + +L + M
Sbjct: 619 TYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENM 674
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + ++P Y +++ A+ ++ + D ++ +N + G I +++ +S+
Sbjct: 675 KEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRA 734
Query: 556 EELVKLLQDM 565
EE + + Q +
Sbjct: 735 EEALNIFQSL 744
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 165/426 (38%), Gaps = 29/426 (6%)
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
N Q+F + + +LL FN+ + K +LV+ K+ + D+ Y ++ +
Sbjct: 183 NVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGH 242
Query: 232 YKIGDSEKVAALFLECKSRKLDS-------------TPFSTHMYKILCDSLGKSGRAFEA 278
C++RKLD P S Y L + L GR EA
Sbjct: 243 ---------------CRNRKLDKAFEVFDRMVKDGCNPNSV-TYSTLINGLCNEGRIGEA 286
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+ +M EKGI Y I S I V A L + +KG + ++
Sbjct: 287 MDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISG 346
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
G +E + + M L + A++N + A+K+++ + G +
Sbjct: 347 LFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLAN 406
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
TY II + KA VF +M + G VV Y++++ K G + +A +
Sbjct: 407 AQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLY 466
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
MK CEP+ Y L+ + L + EM + ++P++ +YT +I Y +
Sbjct: 467 MMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEG 526
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ D+ + + NG ++ SK ++ E K M +G + + Y
Sbjct: 527 KIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYT 586
Query: 579 SAMNAL 584
S +N L
Sbjct: 587 SLINGL 592
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/511 (21%), Positives = 203/511 (39%), Gaps = 53/511 (10%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P T +I L + K V + +++ PDA T + L+ R RK A
Sbjct: 194 KPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFE 253
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGI--------------- 217
+ + DG + +++ + G + + E+M GI
Sbjct: 254 VFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLC 313
Query: 218 ----VLDS----------GC------YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
V D+ GC Y I+ ++ G E ++ K K P
Sbjct: 314 DIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYH--KMLKEGLVP- 370
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+T Y L + L GR ALK F M+ G L + Y +I + +++ A +F
Sbjct: 371 NTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVF 430
Query: 318 KEAEEKGMLRD---PEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
+ ML+D P V L++ ++ G + + MK + + + C +++
Sbjct: 431 NK-----MLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELIS 485
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
GF K +A + +++ G P Q TY ++I+ YC+ A +F M++ G
Sbjct: 486 GFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSA 545
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+ Y+++++ K R +A AKM +G +PN Y SL++ + K++
Sbjct: 546 SIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIF 605
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
EME++ P+ +YT++I + + D + NG +V +
Sbjct: 606 HEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE----NGCEPTIDTYSTLVSGLCRE 661
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ E +L+++MK +G +Y S + A
Sbjct: 662 GRSNEASQLVENMKEKGLSPSMEIYCSLLVA 692
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/496 (19%), Positives = 191/496 (38%), Gaps = 76/496 (15%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I L R + P + + + + G+ + + ELA Y++ K P T LI
Sbjct: 322 INLVRSMGKKGCSPSVQTYTAIISGLFRAGK-MELAIGMYHKMLK-EGLVPNTVTYNALI 379
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-E 183
L ++ + + + + + L +A T ++++ + A + + DG
Sbjct: 380 NELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPS 439
Query: 184 IALLAFNSAM-GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
++ +N+ + + ++ +T +Y MK + D YC+++ + K G + +
Sbjct: 440 PTVVTYNTLIVENLKRGYLNNATRFLY-MMKESNCEPDERTYCELISGFCKGGKLDSATS 498
Query: 243 LFLE--------------------CKSRKLD------------STPFSTHMYKILCDSLG 270
F E CK K+D S Y + L
Sbjct: 499 FFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLS 558
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
K R EA KF M E+G+ + Y SLI T LA ++F E E+K L +
Sbjct: 559 KGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAH 618
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
L+ +EG V+ E+L
Sbjct: 619 TYTSLIYGLCQEGKVDAA---------------------------------------ERL 639
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
GC P TY+++++ CR ++A ++ M++KG + Y S++ + K+ ++
Sbjct: 640 TENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKV 699
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
A+ + M KG +P+++IY L+ + +++ + +++ D + +T +
Sbjct: 700 DCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVL 759
Query: 511 ISAYNRAREFDMCVKF 526
+ + + D+C+KF
Sbjct: 760 VDGLLQEGDSDLCMKF 775
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 94/255 (36%), Gaps = 35/255 (13%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++ G + R A +V+++++ GC P VTY+++IN C +A + EM +K
Sbjct: 237 SLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEK 296
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP--------------------- 467
G + V Y+ ++ GR+ DA+ LV M KGC P
Sbjct: 297 GIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELA 356
Query: 468 --------------NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
N YN+L++ K++ ME + +Y +I
Sbjct: 357 IGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKG 416
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ + + +N+ +G ++ K + + L MK + D
Sbjct: 417 LFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPD 476
Query: 574 ERLYHSAMNALRDAG 588
ER Y ++ G
Sbjct: 477 ERTYCELISGFCKGG 491
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/159 (16%), Positives = 79/159 (49%)
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
F + ++++++ GK + A + A++ + G +P++ +N+++++ + +++
Sbjct: 158 FGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAV 217
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
++ ++ + + PD +YT++I + R R+ D + ++ +G + ++
Sbjct: 218 LVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGL 277
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+I E + +L++M +G + Y +++L D G
Sbjct: 278 CNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIG 316
>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
Length = 697
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 179/385 (46%), Gaps = 18/385 (4%)
Query: 207 LVYEKMKSAG---IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYK 263
L+ E+M+ G V+ G Y + ++G E + +S + P + + Y
Sbjct: 211 LILEEMEEKGENPTVVTYGVY---IHGLCRVGSIEDAWNKIQDLRS---SNQPLNIYCYN 264
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
L + GR EALK +MK++GI D Y+ L+ +F + +++ L +E E
Sbjct: 265 ALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHC 324
Query: 324 GMLRDPEVCLKLVLMYIE-EGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYW 381
+ P VC VLM + +GLV L+ + +AK D IS +++GF K
Sbjct: 325 NK-KPPLVCCTSVLMGLRTKGLVNDCLNFFHEL-SAKGYKHDLISYSTLIHGFLKGHNVK 382
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+A + ++ G +P + Y S+I YCR +A K F M Q G ++ + +V
Sbjct: 383 SANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIV 442
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y G+ +A+ + +MK + PN + Y+ +++ + + + + ++ M + +
Sbjct: 443 DQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIF 502
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMN---GGVIDRAIAGIMVGVFSKLSQIEEL 558
P + YTT++ Y A++F +K + +R G D ++V +FSK ++ +
Sbjct: 503 PSVIHYTTIMDGY--AKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKA 560
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNA 583
+ L ++M EG DE + + ++
Sbjct: 561 LNLFKEMAEEGLSRDEFAFTAIIDG 585
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 205/478 (42%), Gaps = 18/478 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKL-----LIRYLVQSKK 132
P + ++HG+ + + D +N K+ + R L + LI+ Q +
Sbjct: 223 PTVVTYGVYIHGLCRVGSIE----DAWN---KIQDLRSSNQPLNIYCYNALIQGFCQKGR 275
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLV-ASCVRARKFKIANTLLQVFITDGEIALLAFNS 191
D + L E+ K + PD ++ S LV A C N + ++ + + L+ S
Sbjct: 276 PDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTS 335
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ G + + + ++ + G D Y ++ + K + + L E +
Sbjct: 336 VLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNG 395
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
L P +Y L + G EALK F M + G+ D ++ + S + +
Sbjct: 396 L--VP-DYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFE 452
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A + +++ +L + ++ + VEK +V+ M + S I+
Sbjct: 453 EALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIM 512
Query: 372 NGFSKR-RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+G++K+ + A K+Y ++ GC P VT +++ + + SKA +F EM ++G
Sbjct: 513 DGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGL 572
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+ A+++++ Y + G ++ A + KMK PNV Y L+D + K L
Sbjct: 573 SRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATM 632
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
L +M+R VTPD +YT +I+ Y R D + ++E + G + D IA + +G+
Sbjct: 633 LIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDH-IAYLTLGL 689
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 141/322 (43%), Gaps = 14/322 (4%)
Query: 273 GRAFEALK-FFRDMKEKGILEDPSIYA-SLICSF------ASITEVKLAEELFKEAEEKG 324
G EA++ F D+K G P++Y +++ +F +++ A + +E EEKG
Sbjct: 163 GDKLEAVRSLFDDLKNSG--PSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKG 220
Query: 325 MLRDPEVCLKLVLMY--IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
+P V V ++ G +E + ++ ++++ ++ A++ GF ++
Sbjct: 221 --ENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDE 278
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+K+ E++ +G P +Y+ ++NA+C + EM+ +V +S++
Sbjct: 279 ALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLM 338
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
G + D + ++ AKG + ++ Y++L+ + N++ L EM + + P
Sbjct: 339 GLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVP 398
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D + Y ++I Y R +K + +G D +V + Q EE + +
Sbjct: 399 DYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYI 458
Query: 563 QDMKSEGTKLDERLYHSAMNAL 584
MK + + Y +N L
Sbjct: 459 NQMKDQNILPNSYTYSVIINWL 480
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 6/205 (2%)
Query: 390 LISQGCIPGQVTYASI-INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
L S C+ T S+ I + + + A+ VF++ ++ G + + + + ++ +
Sbjct: 105 LDSPECVGRSATVLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGD 164
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDM-----HGRAKNLRQVEKLWKEMERRKVTPD 503
++ L +K G PNV+ Y +++ HG+ ++ Q + +EME + P
Sbjct: 165 KLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPT 224
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
V+Y I R + + R + ++ ++ F + + +E +KLL+
Sbjct: 225 VVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLE 284
Query: 564 DMKSEGTKLDERLYHSAMNALRDAG 588
+MK EG D Y +NA G
Sbjct: 285 EMKDEGISPDIYSYSILVNAFCTEG 309
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 197/479 (41%), Gaps = 44/479 (9%)
Query: 121 KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
KLLI + + K + +++SLS + + P+ +T + L+ S ++ A ++L +
Sbjct: 73 KLLIS-ITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILK 131
Query: 181 DGEIALLA-FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
G +A FN+ + G + +++KM G + Y ++ K+G +
Sbjct: 132 LGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSA 191
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--Y 297
L +S + + +Y + DSL K + +A F +M +GI PSI Y
Sbjct: 192 AIRLL---RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGI--SPSIFTY 246
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
SLI + ++ E K L E M N
Sbjct: 247 NSLIHALCNLCEWKHVTALLNE-----------------------------------MVN 271
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+K+ + I +V+ K A V + +I +G P VTY ++++ +C + +
Sbjct: 272 SKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDE 331
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A KVF M KGF VV+YS+++ Y K RI AM+L +M K PN Y++LM
Sbjct: 332 AVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMH 391
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
L+ L+ EM R PD VSY ++ + R D + +
Sbjct: 392 GLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDP 451
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
D I I++ + ++E L ++ S+G + Y +N L GL +A L
Sbjct: 452 DIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKL 510
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 156/387 (40%), Gaps = 10/387 (2%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I L R PD + S + + KD Q + A++ ++E P T LI
Sbjct: 193 IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ-AFNLFSEMIH-QGISPSIFTYNSLI 250
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-E 183
L +W + +L + ++P+ S +V + + K A+ ++ + I G E
Sbjct: 251 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 310
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ +N+ M G+ + V++ M G D Y ++ Y KI EK L
Sbjct: 311 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 370
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
F E ++L P +T Y L L GR +A+ F +M +G + D Y L+
Sbjct: 371 FEEMCRKEL--IP-NTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDY 427
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLK 361
+ A L K E M DP++ + +++ G +E D+ ++ + L
Sbjct: 428 LCKNRRLDEAIALLKAIEGSNM--DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLH 485
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++NG ++ A K++ ++ +G P TY I + R + ++
Sbjct: 486 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQL 545
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTG 448
EM +GF V + +V M G
Sbjct: 546 LQEMLARGFSADVSTSTVLVEMLSDDG 572
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 94/233 (40%), Gaps = 4/233 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ + LI + ++ + + L E+ ++P+ T S L+ + + A
Sbjct: 344 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAI 403
Query: 173 TLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L +T G+I +++ + K I + + ++ + + D Y +++
Sbjct: 404 ALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGM 463
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ G+ E LF S+ L ++ Y I+ + L + G EA K F +MK KG
Sbjct: 464 CRAGELEAARDLFSNLSSKGLHPNVWT---YTIMINGLCQQGLLAEASKLFGEMKRKGYS 520
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
+ Y + F E +L +E +G D LV M ++GL
Sbjct: 521 PNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGL 573
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 33/202 (16%), Positives = 81/202 (40%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+ + +++ P + ++ + ++ YS + +M G + + ++
Sbjct: 52 ALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILIN 111
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ R+ A ++AK+ G +PN+ +N+L+ + +V L+ +M P
Sbjct: 112 SFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQP 171
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ V+Y T+I+ + ++ D + ++ K Q+ + L
Sbjct: 172 NVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF 231
Query: 563 QDMKSEGTKLDERLYHSAMNAL 584
+M +G Y+S ++AL
Sbjct: 232 SEMIHQGISPSIFTYNSLIHAL 253
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/525 (22%), Positives = 210/525 (40%), Gaps = 40/525 (7%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I+L R PD + S + G+ K+ ++ E AY + E L + LI
Sbjct: 41 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE-AYKLFKEMA-LRGLALDTVCYTALI 98
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
R L+Q+ K S+ + + +PD T S ++
Sbjct: 99 RELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMI------------------------- 133
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
G +K + + +++ M++ G+ + Y ++ K + AL
Sbjct: 134 ---------DGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD--CALE 182
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ + +K TP T Y +L D L KSG A FF +M E G D Y LI F
Sbjct: 183 MLAQMKKAFCTP-DTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241
Query: 305 ASITEVKLAEE-LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
A L +E G D +V + +E+ + ++E + +
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
A++NG K A+ + +++ GC P VTY S+I+ + +A K+F
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM +G V Y++++ +TG+I A + M + GC P+V ++++D +A
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 421
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ +++K ME R + P++V Y+ +I +AR+ D ++ + + D
Sbjct: 422 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 481
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
I++ K +E +M G K D Y+ ++ AG
Sbjct: 482 ILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAG 526
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 162/393 (41%), Gaps = 10/393 (2%)
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL---DSTPFSTHMY 262
+ + EK+ + G Y ++ K+G E+ L RK+ TP Y
Sbjct: 6 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL-----RKIVDNGCTP-DVVTY 59
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
L D LGK R+FEA K F++M +G+ D Y +LI ++ A ++K
Sbjct: 60 TSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTS 119
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
G + D ++ + G + + + +SM+ L ++ + A+++G K R
Sbjct: 120 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 179
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+++ Q+ C P +TY +I+ C+ A F EM + G V Y+ +++
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239
Query: 443 MYGKTGRIRDAMWLVAK-MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ K G A +A+ GC ++ Y +++D + K + + L +++ T
Sbjct: 240 GFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCT 299
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P +Y +++ + + + + NG D ++ K + E KL
Sbjct: 300 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 359
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
++M G LD Y + + L G QA
Sbjct: 360 FKEMALRGLALDTVCYTALIRELLQTGKIPQAS 392
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/423 (21%), Positives = 174/423 (41%), Gaps = 42/423 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD ++ + G+ K E A +++E + +P+ T +LI ++ D+
Sbjct: 194 PDTITYNVLIDGLCKSGDV-EAARAFFDEMLE-AGCKPDVYTYNILISGFCKAGNTDAAS 251
Query: 138 -SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA-FNSAMGG 195
SL+++ I D HT + +V + +K + A L++ +G +A +N+ + G
Sbjct: 252 HSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNG 311
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K+ I + K ++D+GC T
Sbjct: 312 LCKMGRLEEAIDLLRK------IVDNGC-------------------------------T 334
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P Y L D LGK R+FEA K F++M +G+ D Y +LI ++ A
Sbjct: 335 P-DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASS 393
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
++K G + D ++ + G + + + +SM+ L ++ + A+++G
Sbjct: 394 VYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 453
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K R A+++ Q+ C P +TY +I+ C+ A F EM + G V
Sbjct: 454 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 513
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+ +++ + K G A + M + C NV Y +L+ + + L + ++ M
Sbjct: 514 TYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHM 573
Query: 496 ERR 498
+ R
Sbjct: 574 KER 576
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 101/241 (41%), Gaps = 35/241 (14%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCR----------------------IALYS---- 416
AV + E++ + GC P TY +++N C+ + Y+
Sbjct: 5 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 64
Query: 417 ---------KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+A K+F EM +G V Y++++ +TG+I A + M + GC P
Sbjct: 65 GLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVP 124
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
+V ++++D +A + +++K ME R + P++V Y+ +I +AR+ D ++
Sbjct: 125 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 184
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
+ + D +++ K +E +M G K D Y+ ++ A
Sbjct: 185 AQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKA 244
Query: 588 G 588
G
Sbjct: 245 G 245
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%)
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+I +A+ L+ K+ A GC P + YN+L++ + L + L +++ TPD V+YT
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
++I + + K + E + G +D ++ + +I + + + M S
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 569 GTKLDERLYHSAMNALRDAG 588
G D + ++ L AG
Sbjct: 121 GCVPDVVTLSTMIDGLSKAG 140
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 173/399 (43%), Gaps = 4/399 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +LI L + +++ L + + A+T + L+ A +L
Sbjct: 267 PNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSL 326
Query: 175 LQVFITDGEIALLA-FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + G +A +NS + G KL + M + ++ D Y ++ Y +
Sbjct: 327 QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCR 386
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G+ K LF E +S L T + Y L D L + G A + +M +GI D
Sbjct: 387 LGNLMKAFLLFDELRSIYLFPTIVT---YNTLLDGLCRQGELEVAQQLKVEMINEGIAPD 443
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y L+ + + +A+E F E +G+ D ++ ++ G + + E
Sbjct: 444 IVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQE 503
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M I +V+G K A ++ ++++S G IP VTY SII+A+
Sbjct: 504 EMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENG 563
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
K ++F EM KG VV Y+ ++ + GR+ A ++M+ KG PNV YN
Sbjct: 564 RLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYN 623
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
SL++ + + + Q + EM + + P+K SYT +I+
Sbjct: 624 SLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 182/439 (41%), Gaps = 10/439 (2%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL----LAFNSAMGGYNKLHMYYST 205
PD C+R++ R + + ++V+ T GE + + +N+ + Y K
Sbjct: 197 PDVKNCNRILRIL---RDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQG 253
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ + +M+ G + Y ++ K G+ E+ L E L S + Y L
Sbjct: 254 LDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLK---VSAYTYNPL 310
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
G EAL +M KG + Y S I + + A + + +
Sbjct: 311 IYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNL 370
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
L D L+ Y G + K + + +++ L + +++G ++ A +
Sbjct: 371 LPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQ 430
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+ ++I++G P VTY ++N C++ S A++ F EM +G + AY++ +
Sbjct: 431 LKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL 490
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K G A L +M AKG P++ IYN ++D + NL + +L ++M V PD V
Sbjct: 491 KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYV 550
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+YT++I A+ + + E G +++ + ++E +M
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM 610
Query: 566 KSEGTKLDERLYHSAMNAL 584
+ +G + Y+S +N L
Sbjct: 611 QEKGILPNVITYNSLINGL 629
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 158/362 (43%), Gaps = 15/362 (4%)
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVR----ARKFKIANTLLQVFITDGEIALLAF 189
D++ LS D N+LPD + + L+ R + F + + L +++ ++ +
Sbjct: 357 DAMQQLS-DMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP---TIVTY 412
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC-- 247
N+ + G + + +M + GI D Y ++ K+G F E
Sbjct: 413 NTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLH 472
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+ +LDS ++T + L LG + RAF +M KG D IY ++ +
Sbjct: 473 EGLELDSYAYATRIVGEL--KLGDTSRAF---SLQEEMLAKGFPPDLIIYNVVVDGLCKL 527
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++ A EL ++ G++ D ++ ++E G + K ++ M + L S
Sbjct: 528 GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTY 587
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+++G + + A + ++ +G +P +TY S+IN C++ +A F EM +
Sbjct: 588 TVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVE 647
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
KG +Y+ ++ G ++A+ L +M +G +P+ +++L+ G+ L+
Sbjct: 648 KGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQA 707
Query: 488 VE 489
V
Sbjct: 708 VH 709
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 148/360 (41%), Gaps = 41/360 (11%)
Query: 237 SEKVAALFLECKSRKLDST------PFS-THMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
S KV LF C DST PFS TH ++ S+ + F ++ +
Sbjct: 19 SIKVRLLF-PCSFSFHDSTSNHSAPPFSETHFQDVISKSIREKPSNFSNY-YWLSHQFGP 76
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL-MYIEEGLVEKT 348
++ DP ++ ++ SF T ++A LF+ AE + R E +L + + L+
Sbjct: 77 VIVDPDLFVRVLSSFR--TSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSA 134
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI--- 405
V+E + NA + ++ + LI GC+ +V+ +
Sbjct: 135 YWVMERVINANMH-----------------------RIVDVLIG-GCVSSEVSVKILDLL 170
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
I Y + ++ + VF +M + V + ++ + + A+ + M G
Sbjct: 171 IWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGI 230
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
+P + YN+L+D + + ++Q L EM+RR P+ V+Y +I+ ++ EF+
Sbjct: 231 KPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKG 290
Query: 526 FYNEFRMNG-GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
E G V ++ G F+K + E + L ++M +G Y+S + L
Sbjct: 291 LIGEMLKTGLKVSAYTYNPLIYGYFNK-GMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 150/316 (47%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+T+ Y L SL ++ R EA FR M +G + Y+ LI +V A EL
Sbjct: 51 NTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELL 110
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E + G + L+ + G +++ +D+ M + +++GFSK+
Sbjct: 111 NEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKK 170
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A +++E+++ +GCIP TY S+++ + R + + + +F +M ++G + +
Sbjct: 171 GDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTF 230
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++++ + K G + +A L +M++ GC P+V YN+L+ + ++L +EM R
Sbjct: 231 NNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIR 290
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
V PD VSY +I Y+++ D +K + E +G D ++ + ++
Sbjct: 291 SGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGA 350
Query: 558 LVKLLQDMKSEGTKLD 573
+ +DM + G+ D
Sbjct: 351 AFVVFKDMIANGSAPD 366
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 168/357 (47%), Gaps = 3/357 (0%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
Y M +AG V ++ Y ++ + + E+ ++F ++ FS Y IL
Sbjct: 40 YNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFS---YSILIAG 96
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L + + EA + +M + G + Y SL+ + ++K A +LF +G D
Sbjct: 97 LCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPD 156
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
V L+ + ++G + + + E M + ++++GFS++ + +++
Sbjct: 157 GVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFK 216
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ QGC+P T+ ++++ +C++ +A ++F+EM+ G VV+Y++++ G
Sbjct: 217 DMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKG 276
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ +A L+ +M G P++ YN L+D + ++ L KL+ E+ + + PD SY+
Sbjct: 277 KPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYS 336
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
T+I RA + + + NG D A+ +V + ++ E +L Q M
Sbjct: 337 TIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 107/217 (49%)
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A V+ + +QGC P +Y+ +I CR +A ++ EM G VV Y S
Sbjct: 68 FEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGS 127
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
+++ K G++++A+ L ++M +GC P+ +YN L+D + ++ + +L++EM +
Sbjct: 128 LLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKG 187
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
P +Y +++S ++R EF + + G V + ++ F K+ + E
Sbjct: 188 CIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAH 247
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+L +M+S G D Y++ + + G +AQ L
Sbjct: 248 RLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRL 284
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 166/409 (40%), Gaps = 6/409 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T L+R L Q+++++ S+ P+ + S L+A R +K A L
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L I G + ++ + S + G K+ + ++ +M G D Y +++ + K
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
GD + LF E + T F+ Y L + G F+DM +G + +
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFT---YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ +L+ F + ++ A LF E G D L+ +G + ++
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLR 286
Query: 354 SMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
M + + D +S I ++G+SK A+K++ ++ G P +Y++II+ CR
Sbjct: 287 EMIRSGVG-PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
A VF +M G +V + R+ ++ L M C P + Y
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
N LM +AK V +++ E+ R +PD ++ R+ + D
Sbjct: 406 NLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKD 454
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/425 (19%), Positives = 175/425 (41%), Gaps = 4/425 (0%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
L+ L +S + D + D +P+ +T L+ S +A++F+ A ++ + G
Sbjct: 23 LLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ +++ + G + + +M G + Y ++ K+G ++
Sbjct: 83 CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF R P +Y +L D K G EA + F +M EKG + Y SL+
Sbjct: 143 DLFSRMVYR---GCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
F+ E + LFK+ +G + + L+ + + G + + + M++
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
++ G + A ++ ++I G P V+Y +I+ Y + A K+
Sbjct: 260 PDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F E+ + G + +YS+++ + G++ A + M A G P+ + L+ R
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCR 379
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L + +L++ M + + P Y ++ +A+ D + ++E G D I
Sbjct: 380 GERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEI 439
Query: 542 AGIMV 546
+ +++
Sbjct: 440 SKVIL 444
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 128/331 (38%), Gaps = 35/331 (10%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
T Y L + L KSGR + DM G + + Y L+ S + A +F
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+ +G C V Y ++ G +
Sbjct: 76 RGMAAQG-------CSPNVFSY----------------------------SILIAGLCRG 100
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
+ A ++ ++I G P VTY S+++ C++ +A +F M +G V Y
Sbjct: 101 QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVY 160
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+ ++ + K G + +A L +M KGC P V+ YNSL+ R +V+ L+K+M R
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ P+ ++ ++ + + + + + E R G D ++ + E
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHE 280
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+LL++M G D Y+ ++ +G
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 74/170 (43%)
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
Q ++ ++Y+ ++ + K+GR M A GC PN + Y L+ +A+
Sbjct: 10 QVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFE 69
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ +++ M + +P+ SY+ +I+ R ++ D + NE G + G ++
Sbjct: 70 EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
K+ +++E V L M G D +Y+ ++ G +A L
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRL 179
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 155/324 (47%)
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L K G+ + +FF+DM G Y +I +V+ A LF+E + +G
Sbjct: 101 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 160
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
++ D ++ + + G ++ T+ E MK+ + A++N F K +
Sbjct: 161 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 220
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+ Y ++ G P V+Y+++++A+C+ + +A K +++M++ G Y+S++
Sbjct: 221 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 280
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K G + DA L +M G E NV Y +L+D A+ +++ E+L+ +M+ V P+
Sbjct: 281 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 340
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
SY +I + +A+ D ++ NE + G D + G + L +IE ++ +
Sbjct: 341 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 400
Query: 565 MKSEGTKLDERLYHSAMNALRDAG 588
MK G K + +Y + M+A +G
Sbjct: 401 MKECGIKANSLIYTTLMDAYFKSG 424
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 164/370 (44%), Gaps = 7/370 (1%)
Query: 199 LHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFS 258
L M I + KMK + + ++ + K+G ++ V F + T F+
Sbjct: 73 LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFT 132
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
Y I+ D + K G A F +MK +G++ D Y S+I F + + F+
Sbjct: 133 ---YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 189
Query: 319 EAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E K M +P+V L+ + + G + L+ MK LK + +V+ F K
Sbjct: 190 EM--KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 247
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A+K Y + G +P + TY S+I+A C+I S A ++ EM Q G + VV
Sbjct: 248 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 307
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++++ R+++A L KM G PN+ YN+L+ +AKN+ + +L E++
Sbjct: 308 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 367
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
R + PD + Y T I + + NE + G + I ++ + K
Sbjct: 368 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 427
Query: 557 ELVKLLQDMK 566
E + LL +MK
Sbjct: 428 EGLHLLDEMK 437
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 178/426 (41%), Gaps = 39/426 (9%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
++ M AG Y +++ K GD E LF E K R L P T Y + D
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGL--VP-DTVTYNSMIDG 174
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
GK GR + + FF +MK+ D Y +LI F ++ + E ++E + G+ +
Sbjct: 175 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 234
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
LV + +EG++++ + M+ L ++ ++++ K A ++
Sbjct: 235 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+++ G VTY ++I+ C +AE++F +M G + +Y++++ + K
Sbjct: 295 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 354
Query: 449 RIRDAMWLVAKMKAKGCEPN-------VW----------------------------IYN 473
+ A+ L+ ++K +G +P+ +W IY
Sbjct: 355 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 414
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+LMD + ++ N + L EM+ + V++ +I + + V ++N +
Sbjct: 415 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 474
Query: 534 GGV-IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
G+ + AI M+ K +Q+E L + M +G D Y S M+ G ++
Sbjct: 475 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 534
Query: 593 AQWLQQ 598
A L+
Sbjct: 535 ALALRD 540
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 126/263 (47%), Gaps = 2/263 (0%)
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC-AIVNGFSKRRGYWAAVKVYEQLISQ 393
L + I+ G++E+ + MK ++ SC +++ F+K + ++ +I
Sbjct: 66 LFSVLIDLGMLEEAIQCFSKMKRFRV-FPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA 124
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G P TY +I+ C+ A +F EM+ +G V Y+SM+ +GK GR+ D
Sbjct: 125 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 184
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ +MK CEP+V YN+L++ + L + ++EM+ + P+ VSY+T++ A
Sbjct: 185 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 244
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ + +KFY + R G V + ++ K+ + + +L +M G + +
Sbjct: 245 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 304
Query: 574 ERLYHSAMNALRDAGLQMQAQWL 596
Y + ++ L DA +A+ L
Sbjct: 305 VVTYTALIDGLCDAERMKEAEEL 327
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 114/514 (22%), Positives = 208/514 (40%), Gaps = 13/514 (2%)
Query: 71 SHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQS 130
S VP FD+ L +L D E A +++ K+ F +S LL R+ +
Sbjct: 51 STRNVCVPGFGVFDA-LFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRF-AKL 108
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAF 189
K D + +D P T + ++ + + A L + G + + +
Sbjct: 109 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 168
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
NS + G+ K+ T+ +E+MK D Y ++ + K G + E K
Sbjct: 169 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 228
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
L S Y L D+ K G +A+KF+ DM+ G++ + Y SLI + I
Sbjct: 229 NGLKPNVVS---YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 285
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
+ A L E + G+ + L+ + +++ ++ M A + + A
Sbjct: 286 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 345
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++GF K + A+++ +L +G P + Y + I C + A+ V EM++ G
Sbjct: 346 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 405
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN---LR 486
+ Y++++ Y K+G + + L+ +MK E V + L+D G KN +
Sbjct: 406 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLID--GLCKNKLVSK 463
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR-AIAGIM 545
V+ + + + +T +I + + + + + G V DR A +M
Sbjct: 464 AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 523
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
G F K + E + L M G KLD Y S
Sbjct: 524 DGNF-KQGNVLEALALRDKMAEIGMKLDLLAYTS 556
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 98/466 (21%), Positives = 189/466 (40%), Gaps = 21/466 (4%)
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
E K P+ T +I + + D V E+ K PD T + L+ +
Sbjct: 154 EEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKF 213
Query: 166 RKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
K I + +G + ++++++ + + K M I Y M+ G+V + Y
Sbjct: 214 GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTY 273
Query: 225 CQIMEAYYKIG---DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
+++A KIG D+ ++ L+ ++ Y L D L + R EA +
Sbjct: 274 TSLIDANCKIGNLSDAFRLGNEMLQV------GVEWNVVTYTALIDGLCDAERMKEAEEL 327
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
F M G++ + + Y +LI F + A EL E + +G+ P++ L ++
Sbjct: 328 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI--KPDLLLYGTFIW-- 383
Query: 342 EGL-----VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
GL +E V+ MK +K + I +++ + K + + +++
Sbjct: 384 -GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 442
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQK-GFDKCVVAYSSMVAMYGKTGRIRDAMW 455
VT+ +I+ C+ L SKA F + G +++M+ K ++ A
Sbjct: 443 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 502
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L +M KG P+ Y SLMD + + N+ + L +M + D ++YT+++ +
Sbjct: 503 LFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLS 562
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
+ F E G D + ++ +L I+E V+L
Sbjct: 563 HCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 608
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 180/414 (43%), Gaps = 27/414 (6%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ ++ K + + ++Y E K +P + L+ + +
Sbjct: 198 PDVITYNALINCFCKFGKLP-IGLEFYREMKG-NGLKPNVVSYSTLVDAFCKEGMMQQAI 255
Query: 138 SLSEDFKIYNVLPDAHTCSRLV-ASCVRAR---KFKIANTLLQVFITDGEIALLAFNSAM 193
D + ++P+ +T + L+ A+C F++ N +LQV + E ++ + + +
Sbjct: 256 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV---EWNVVTYTALI 312
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR--K 251
G ++ KM +AG++ + Y ++ + K + ++ L E K R K
Sbjct: 313 DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK 372
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKF-FRDMKEKGILEDPSIYASLICSFASITEV 310
D + T ++ LC SL K EA K +MKE GI + IY +L+ ++
Sbjct: 373 PDLLLYGTFIWG-LC-SLEK----IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 426
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIE----EGLVEKTLDVVESMKNA-KLKISDC 365
L E +E D EV + + I+ LV K +D + N L+ +
Sbjct: 427 TEGLHLLDEMKE----LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 482
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
I A+++G K AA ++EQ++ +G +P + Y S+++ + +A + +M
Sbjct: 483 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 542
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
+ G ++AY+S+V +++ A + +M +G P+ + S++ H
Sbjct: 543 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKH 596
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 120/304 (39%), Gaps = 35/304 (11%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P+ +++ +HG +K + + A + NE K +P+ I L +K ++
Sbjct: 337 IPNLASYNALIHGFVK-AKNMDRALELLNELKGRG-IKPDLLLYGTFIWGLCSLEKIEAA 394
Query: 137 VSLSEDFK---------IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG----- 182
+ + K IY L DA+ FK N + + D
Sbjct: 395 KVVMNEMKECGIKANSLIYTTLMDAY--------------FKSGNPTEGLHLLDEMKELD 440
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSA-GIVLDSGCYCQIMEAYYKIGDSEKV 240
E+ ++ F + G K + + + ++ + G+ ++ + +++ K E
Sbjct: 441 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 500
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
LF + + L P T Y L D K G EAL M E G+ D Y SL
Sbjct: 501 TTLFEQMVQKGL--VPDRT-AYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 557
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ + +++ A +E +G+ D +C+ ++ + E G +++ +++ + +L
Sbjct: 558 VWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 617
Query: 361 KISD 364
SD
Sbjct: 618 LTSD 621
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 218/498 (43%), Gaps = 65/498 (13%)
Query: 119 TLKLLIRYLVQSKK----WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
T +L+R ++ K WD + +L + + + VA R R ++ +
Sbjct: 16 TAAVLMRNVIAQKSHQDVWDVLDALPRGIGTWEAIMEN------VAELRRLRNWRSVILI 69
Query: 175 LQVFITDGEI---ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L+ +I G + + FN + Y K + + MK + + ++ AY
Sbjct: 70 LE-WILQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAY 128
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTH--------MYKILCDSLGKSGRAFEALKFFR 283
+ EK LF E K + +P + Y + LGKSGR +A FR
Sbjct: 129 SRGVQLEKAEKLFHEMKES--NYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFR 186
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIE 341
DM+++GIL + + +I + A++LF+ + L P + LM +
Sbjct: 187 DMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSM--RKALCPPNLYTYTALMNAHAR 244
Query: 342 EGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
EG + ++ +++ I D + A++ +S+ A +V++ ++ G P QV
Sbjct: 245 EGNCVRAEEIFAELQSVGF-IPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQV 303
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
+Y +I+A+ R L + A+ V+ M++ GF + ++ +++ Y K G++ +A LV ++
Sbjct: 304 SYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREI 363
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM------------------------- 495
+ G +P+ +++NSL+ +G + + ++E L + M
Sbjct: 364 ENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYI 423
Query: 496 ----------ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
E + +TPD +S+T+++ AY + + F CV + + G + DRA A +
Sbjct: 424 EKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKAGCIPDRATAKVF 483
Query: 546 VGVFSKLSQIEELVKLLQ 563
+ Q++E+ +++
Sbjct: 484 LSSCRSPEQVKEVTDMIE 501
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 145/338 (42%), Gaps = 13/338 (3%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ +L D+ GKS + EA K F MK+ L + + L+ +++ +++ AE+LF E +
Sbjct: 86 FNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMK 145
Query: 322 EKGMLRDPEVCLKLVL-------MYIE----EGLVEKTLDVVESMKNAKLKISDCISCAI 370
E P ++ Y+E G + + D M+ + + +
Sbjct: 146 ESNY--SPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIM 203
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+N + K A ++ + C P TY +++NA+ R +AE++F E+Q GF
Sbjct: 204 INIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGF 263
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
V Y++++ Y + A + M G P+ YN L+D GRA +
Sbjct: 264 IPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQA 323
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
++ M+ P S+ ++S+Y +A + + E +G D + ++ +
Sbjct: 324 VYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYG 383
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+I+E+ LL+ M S K D ++ +NA G
Sbjct: 384 NSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGG 421
>gi|111154024|dbj|BAF02664.1| pentatricopeptide repeat protein [Physcomitrella patens]
gi|111185880|dbj|BAF02672.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 531
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 179/385 (46%), Gaps = 4/385 (1%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+NSA+ K + ++++ + AG+ D Y +++ + K+ KV +F +
Sbjct: 148 YNSALLNCVKDGRMRDAMTIFKRFEGAGLKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQ 207
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ P + +L + G G A + + +G+ D Y +L+ ++A
Sbjct: 208 RNRC---PPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEG 264
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ AE+ + + G++ D LV Y + GL + ++E+MK + ++ S +
Sbjct: 265 LWEEAEKTLSDMLDVGIVDDRPYA-ALVAAYGKAGLTDNVNKILETMKASGVEASTTLYN 323
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++N SK A V + + + GC ++TY S++ AY R AE + EM++
Sbjct: 324 TLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRA 383
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G V+Y +++ Y + GR+ DA ++ M+ C+P V IYN ++ + AK Q
Sbjct: 384 GIQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQA 443
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
E++++ M+ + PD V++ T+IS Y ++R+ Y + G + I++
Sbjct: 444 ERMFQTMQDCGLRPDAVTFNTLISMYIKSRKRKQAEDCYIRMQQLGCKPNAVTYKILLKA 503
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLD 573
++ + + ++ DM+ G L+
Sbjct: 504 YTDYNNSIDAERIRLDMRKAGISLE 528
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/395 (19%), Positives = 163/395 (41%), Gaps = 40/395 (10%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
+P+ + LI+ + K ++ + + + PD C+ L+++ +A
Sbjct: 176 LKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGNGGLPVLAE 235
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ +Q G + +A+ + + Y + ++ M GIV D Y ++ AY
Sbjct: 236 SAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGIV-DDRPYAALVAAY 294
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K G ++ V + K+ +++ ST +Y L + K+ +A + M+ G
Sbjct: 295 GKAGLTDNVNKILETMKASGVEA---STTLYNTLINIHSKAEAPEKARAVLQLMQADGCQ 351
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
D Y S++ +++ + +AE + E + G+ P L+ Y G + +
Sbjct: 352 CDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERI 411
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+ +M+NAK K + V++Y +IS Y
Sbjct: 412 LRAMQNAKCKPT--------------------VEIYNMMIS---------------GYAS 436
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ S+AE++F MQ G V ++++++MY K+ + + A +M+ GC+PN
Sbjct: 437 AKMRSQAERMFQTMQDCGLRPDAVTFNTLISMYIKSRKRKQAEDCYIRMQQLGCKPNAVT 496
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
Y L+ + N E++ +M + ++ + +S
Sbjct: 497 YKILLKAYTDYNNSIDAERIRLDMRKAGISLETLS 531
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/524 (20%), Positives = 229/524 (43%), Gaps = 10/524 (1%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQE---LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
+P+ ++ L G+ + ++QE L ++ P P+ + +I +
Sbjct: 159 IPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP---PDVVSYTTVINGFFKEGDL 215
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSA 192
D + +LP+ T S ++A+ +A+ A +L + +G + +NS
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY I +KM S G+ D Y +M+ K G + +F R L
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
P T Y L G E M GI + +++ LIC++A +V
Sbjct: 336 --KPEIT-TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A +F + ++G+ D ++ + + G VE + E M + +L + + ++++
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
+ A ++ +++ +G + + SII+++C+ ++EK+F M + G
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
++ YS+++ Y G++ +A L+A M + G +P+ YN+L++ + + + L+
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+EME V+PD ++Y ++ + R + Y +G ++ + I++ K
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ +E +++ Q++ +L+ R ++ + AL G +A+ L
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 95/503 (18%), Positives = 197/503 (39%), Gaps = 78/503 (15%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P+ + ++S +HG Q +E A + + P+ T L+ YL ++ +
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKE-AIGFLKKMHS-DGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
+ + + P+ T TLLQ + T G AL+ + +
Sbjct: 324 RKMFDSMTKRGLKPEITT----------------YGTLLQGYATKG--ALVEMHGLL--- 362
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DS 254
+ M GI + + ++ AY K G ++ +F + + + L D+
Sbjct: 363 -------------DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDT 409
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+ T + ILC KSGR +A+++F M ++ + +Y SLI S + A+
Sbjct: 410 VTYGT-VIGILC----KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
EL E ++G +CL + +I++
Sbjct: 465 ELILEMLDRG------ICLDTIFFN-----------------------------SIIDSH 489
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K + K+++ ++ G P +TY+++I+ YC +A K+ M G
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDC 549
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V Y++++ Y K R+ DA+ L +M++ G P++ YN ++ + + ++L+
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+ + +Y ++ + D ++ + + ++ IM+G K+ +
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669
Query: 555 IEELVKLLQDMKSEGTKLDERLY 577
+E L + + G D R Y
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTY 692
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 163/414 (39%), Gaps = 23/414 (5%)
Query: 72 HHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSK 131
H PD ++S + + K+ + E + + K+ +PE +T L++
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR--GLKPEITTYGTLLQGYATKG 353
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL----L 187
+ L + + P+ + S L+ C A++ K+ +L VF + L +
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILI--CAYAKQGKVDQAML-VFSKMRQQGLNPDTV 410
Query: 188 AFNSAMG-----GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ + +G G + M Y ++ E++ IV Y ++ + +K
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV-----YNSLIHSLCIFDKWDKAKE 465
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L LE R + T + + DS K GR E+ K F M G+ D Y++LI
Sbjct: 466 LILEMLDRGI---CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ ++ A +L GM D L+ Y + +E L + M+++ +
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
I+ G + R AA ++Y + G TY I++ C+ L +A ++F
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ ++ M+ K GR +A L A + A G P+V Y SLM
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY-SLM 695
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 4/214 (1%)
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC---VVAYSSMVA 442
V ++ GCIP +Y ++ C +A ++ M G D C VV+Y++++
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD-CPPDVVSYTTVIN 207
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ K G + A +M +G PNV Y+S++ +A+ + + ++ M + V P
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ +Y +++ Y + + + F + +G D ++ K + E K+
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M G K + Y + + G ++ L
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 23/276 (8%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIG---DSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+M GI LD+ + I++++ K G +SEK+ L + K D +ST L D
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI-GVKPDIITYST-----LID 522
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+G+ EA K M G+ D Y +LI + I+ ++ A LF+E E G+
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV-- 580
Query: 328 DPEVCLKLVLMYIEEGLVE-------KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
P++ + I +GL + K L V + +L++S I++G K
Sbjct: 581 SPDI---ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS--TYNIILHGLCKNNLT 635
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A+++++ L T+ +I A ++ +A+ +F + G V YS M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ G + + L M+ GC N + NS++
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 161/369 (43%), Gaps = 3/369 (0%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+ +M GI+ D+ Y +++ + K GD + F E SR D TP Y +
Sbjct: 762 FSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSR--DITP-DVLTYTAIISG 818
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
+ G EA K F +M +G+ D + L+ + +K A + + G +
Sbjct: 819 FCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPN 878
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ +EG ++ +++ M L+ + +IVNG K AVK+
Sbjct: 879 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 938
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+ + G VTY ++++AYC+ KA+++ EM KG +V ++ ++ + G
Sbjct: 939 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHG 998
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ D L+ M AKG PN +N L+ + NL+ ++K+M R V PD +Y
Sbjct: 999 MLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYE 1058
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
++ + AR + E + G + + +++ F K + E ++ M+ +
Sbjct: 1059 NLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRD 1118
Query: 569 GTKLDERLY 577
G D+ ++
Sbjct: 1119 GLAADKEIF 1127
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 163/383 (42%), Gaps = 42/383 (10%)
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL--ECKSRKLDSTPFSTHM 261
+ I+V+ + G+ + Y ++ ++G + L L E K D +ST
Sbjct: 652 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYST-- 709
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ + + G + K MK+KG+ + Y S+I I ++ AEE F E
Sbjct: 710 ---VINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMI 766
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+G+L D + +V+GF KR
Sbjct: 767 GQGILPD-----------------------------------TIVYTTLVDGFCKRGDIR 791
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
AA K + ++ S+ P +TY +II+ +C+I +A K+F EM +G + ++ ++ ++
Sbjct: 792 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELM 851
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y K G I+DA + M GC PNV Y +L+D + +L +L EM + +
Sbjct: 852 NGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 911
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ +Y ++++ ++ + VK EF G D ++ + K ++++ ++
Sbjct: 912 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 971
Query: 562 LQDMKSEGTKLDERLYHSAMNAL 584
L +M +G + ++ MN
Sbjct: 972 LTEMLGKGLQPTIVTFNVLMNGF 994
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 139/305 (45%), Gaps = 10/305 (3%)
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAE-----EKGMLRDPEVCLKLVLMYIEEGLVE 346
+D + SLI SF ++ + E + + K DP V + +E G++
Sbjct: 556 KDLKVAQSLISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLP 615
Query: 347 KTLDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWA-AVKVYEQLISQGCIPGQVTYAS 404
+ V E M N L +S SC + + SK A A+ V+ + G +Y
Sbjct: 616 EARKVFEKMLNYGLVLS-VDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNI 674
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW-LVAKMKAK 463
+I+ C++ ++A + + M+ KG+ V++YS+++ Y + G + D +W L+ KMK K
Sbjct: 675 VIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGEL-DKVWKLIEKMKQK 733
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
G +PN + Y S++ + R L + E+ + EM + + PD + YTT++ + + +
Sbjct: 734 GLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAA 793
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
KF+ E D ++ F ++ + E KL +M G + D + MN
Sbjct: 794 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNG 853
Query: 584 LRDAG 588
AG
Sbjct: 854 YCKAG 858
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 141/340 (41%), Gaps = 8/340 (2%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYST 205
++ PD T + +++ + A L + G E ++ F M GY K
Sbjct: 804 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDA 863
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
V+ M AG + Y +++ K GD + L E L F+ Y +
Sbjct: 864 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT---YNSI 920
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ L KSG EA+K + + G+ D Y +L+ ++ E+ A+E+ E KG+
Sbjct: 921 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGL 980
Query: 326 LRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
P + VLM + G++E ++ M + + +V + R AA
Sbjct: 981 --QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAA 1038
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+Y+ + S+G P TY +++ +C +A +F EM+ KGF V YS ++
Sbjct: 1039 TAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 1098
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+ K + +A + +M+ G + I++ D + K
Sbjct: 1099 FFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGK 1138
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 93/196 (47%)
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
+G P ++Y+++IN YCR K K+ +M+QKG Y S++ + + ++ +
Sbjct: 698 KGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAE 757
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A ++M +G P+ +Y +L+D + ++R K + EM R +TPD ++YT +IS
Sbjct: 758 AEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 817
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ + + K ++E G D ++ + K I++ ++ M G
Sbjct: 818 GFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSP 877
Query: 573 DERLYHSAMNALRDAG 588
+ Y + ++ L G
Sbjct: 878 NVVTYTTLIDGLCKEG 893
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 13/218 (5%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK-------AEKVFIEMQQKGFDKCVV 435
A KV+E++++ G + S+ + +A SK A VF E + G V
Sbjct: 617 ARKVFEKMLNYGLV------LSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVA 670
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+Y+ ++ + GRI +A L+ M+ KG P+V Y+++++ + R L +V KL ++M
Sbjct: 671 SYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+++ + P+ +Y ++I R + + ++E G + D + +V F K I
Sbjct: 731 KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDI 790
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
K +M S D Y + ++ G ++A
Sbjct: 791 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 828
>gi|297826989|ref|XP_002881377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327216|gb|EFH57636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 589
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 211/454 (46%), Gaps = 31/454 (6%)
Query: 123 LIRYLVQ---SKKWDSIVSLSE-DFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
LI VQ +KKWDSI+ + E + + PD + L+ + + +FK A +L
Sbjct: 135 LINVSVQLRLNKKWDSIILVCEWILRRSSFQPDVICFNLLIDAYGQKFRFKEAESLYVQL 194
Query: 179 I------TDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+ T+ LL M G L +L+ +M++ + Y +E
Sbjct: 195 LESRCVPTEDTYTLLIKAYCMAG---LIEKAEAVLI--EMQNHHVSPSVTVYNAYIEGLM 249
Query: 233 K-IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K G++E+ +F + K D +T Y ++ + GK+ +++ + K F +M+
Sbjct: 250 KRKGNTEQAIDVF---QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLFCEMRSHQCK 306
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y +L+ +FA + AEE+F++ +E G + G ++
Sbjct: 307 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHIDS------------RAGYPYGAAEI 354
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
M++ + +V+ + + + A V+E++ G P ++ +++AY R
Sbjct: 355 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSR 414
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+K E + EM + G + +SM+ +YG+ G+ ++A+M+ C ++
Sbjct: 415 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 474
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
YN L++++G+A L ++E+L+ E++ R PD V++T+ I AY+R + + C++ + E
Sbjct: 475 YNILINIYGKAGFLERIEELFVELKERNFKPDVVTWTSRIGAYSRKKLYVKCLEIFEEMI 534
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+G D A +++ S Q+E++ +L+ M
Sbjct: 535 DSGCAPDGGTAKVLLSACSSEDQVEQVTSVLRTM 568
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 155/333 (46%), Gaps = 21/333 (6%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ +L D+ G+ R EA + + E + Y LI ++ ++ AE + E +
Sbjct: 171 FNLLIDAYGQKFRFKEAESLYVQLLESRCVPTEDTYTLLIKAYCMAGLIEKAEAVLIEMQ 230
Query: 322 EKGMLRDPEVCLKLVLMYIE-----EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ P V + YIE +G E+ +DV + MK + K + ++N + K
Sbjct: 231 NHHV--SPSVTVYNA--YIEGLMKRKGNTEQAIDVFQRMKRDRCKPTTETYNLMINLYGK 286
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ + K++ ++ S C P TY +++NA+ R L KAE++F ++Q+ G
Sbjct: 287 ASKSYMSWKLFCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHIDSRAG 346
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y YG A + + M+ GCEP+ YN ++D +GRA E +++EM+
Sbjct: 347 YP-----YG-------AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 394
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
R + P S+ ++SAY+RAR+ C E NG D + M+ ++ +L Q
Sbjct: 395 RLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 454
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
++ K+L +M++ D Y+ +N AG
Sbjct: 455 KMEKILAEMENGPCTADISTYNILINIYGKAGF 487
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/427 (18%), Positives = 148/427 (34%), Gaps = 87/427 (20%)
Query: 71 SHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQS 130
+HH + P +++++ G++K E A D + K+ +P T L+I ++
Sbjct: 231 NHHVS--PSVTVYNAYIEGLMKRKGNTEQAIDVFQRMKR-DRCKPTTETYNLMINLYGKA 287
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFN 190
K L + + + P+ T + LV + R + A + + DG I
Sbjct: 288 SKSYMSWKLFCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHI------ 341
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ GY Y ++ M+ G D Y
Sbjct: 342 DSRAGYP-----YGAAEIFSLMQHMGCEPDRASY-------------------------- 370
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
I+ D+ G++G +A F +MK GI + L+ +++ +V
Sbjct: 371 ------------NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDV 418
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
E + KE E G+ D V ++ +Y G K ++ M+N
Sbjct: 419 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP----------- 467
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
C TY +IN Y + + E++F+E++++ F
Sbjct: 468 ------------------------CTADISTYNILINIYGKAGFLERIEELFVELKERNF 503
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
VV ++S + Y + + + +M GC P+ L+ + QV
Sbjct: 504 KPDVVTWTSRIGAYSRKKLYVKCLEIFEEMIDSGCAPDGGTAKVLLSACSSEDQVEQVTS 563
Query: 491 LWKEMER 497
+ + M +
Sbjct: 564 VLRTMHK 570
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 86/207 (41%), Gaps = 6/207 (2%)
Query: 394 GCIPG-QVTYASIINAYCRIALYSKAEKVFIE----MQQKGFDKCVVAYSSMVAMYGKTG 448
G +P ++ +IN ++ L K + + + +++ F V+ ++ ++ YG+
Sbjct: 123 GALPSTHASWDDLINVSVQLRLNKKWDSIILVCEWILRRSSFQPDVICFNLLIDAYGQKF 182
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
R ++A L ++ C P Y L+ + A + + E + EM+ V+P Y
Sbjct: 183 RFKEAESLYVQLLESRCVPTEDTYTLLIKAYCMAGLIEKAEAVLIEMQNHHVSPSVTVYN 242
Query: 509 TVISAY-NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
I R + + + + + +M+ ++ K S+ KL +M+S
Sbjct: 243 AYIEGLMKRKGNTEQAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLFCEMRS 302
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQAQ 594
K + Y + +NA GL +A+
Sbjct: 303 HQCKPNICTYTALVNAFAREGLCEKAE 329
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 189/404 (46%), Gaps = 8/404 (1%)
Query: 181 DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
D IA+ +++ M GY + ++V++++K G Y ++ Y K+G K+
Sbjct: 446 DAPIAI--YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVG---KI 500
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
+ + K + + Y ++ + K A F DM ++G+ D +Y ++
Sbjct: 501 SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 560
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
I +F + + A + KE ++ + ++ Y + G + ++L+V + M+
Sbjct: 561 ISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 620
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ ++NG ++R AV++ +++ G + TY I+ Y + KA +
Sbjct: 621 VPTVHTFNGLINGLVEKR---QAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 677
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
F +Q +G D + Y +++ K+GR++ A+ + +M A+ N ++YN L+D
Sbjct: 678 YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 737
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
R ++ + L ++M++ V PD +YT+ ISA ++A + + + E G +
Sbjct: 738 RRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIK 797
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ +++ S E+ + ++MK+ G K D+ +YH + +L
Sbjct: 798 TYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 841
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 185/452 (40%), Gaps = 78/452 (17%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC-KSRKLDSTPFSTHMYKILC 266
+E+M++ GI S Y ++ AY D ++ L C + K + S Y ++
Sbjct: 331 TFERMRARGITPTSRIYTSLIHAYAVGRDMDEA----LSCVRKMKEEGIEMSLVTYSVIV 386
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG-- 324
K+G A A +F + K + SIY +I + ++ AE L +E EE+G
Sbjct: 387 GGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGID 446
Query: 325 --------------MLRDPE---VCLK----------------LVLMYIEEGLVEKTLDV 351
M+ D + V K L+ +Y + G + K L+V
Sbjct: 447 APIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 506
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
MK +K + ++NGF K + + A V+E ++ +G P + Y +II+A+C
Sbjct: 507 SRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCG 566
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ +A + EMQ+ + ++ Y K+G +R ++ + M+ GC P V
Sbjct: 567 MGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHT 626
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+N L++ G + RQ ++ EM V+ ++ +YT ++ Y + +++ +
Sbjct: 627 FNGLIN--GLVEK-RQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 683
Query: 532 MNG------------------GVIDRAIA-----------------GIMVGVFSKLSQIE 556
G G + A+A I++ +++ +
Sbjct: 684 NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW 743
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E L+Q MK EG K D Y S ++A AG
Sbjct: 744 EAADLIQQMKKEGVKPDIHTYTSFISACSKAG 775
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 157/358 (43%), Gaps = 6/358 (1%)
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y + GD + F ++R + TP ++ +Y L + EAL R MKE+GI
Sbjct: 319 YGRRGDMHRARETFERMRARGI--TP-TSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGI 375
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
Y+ ++ F+ + A+ F EA+ + + K++ + + +E+
Sbjct: 376 EMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEA 435
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+V M+ + I +++G++ + V+++L G P VTY +IN Y
Sbjct: 436 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYT 495
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
++ SKA +V M+++G + YS M+ + K +A + M +G +P+V
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+YN+++ N+ + + KEM++ + P ++ +I Y ++ + ++ ++
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
R G V G+ + L + + V++L +M G +E Y M G
Sbjct: 616 RRCGCV---PTVHTFNGLINGLVEKRQAVEILDEMTLAGVSANEHTYTKIMQGYASVG 670
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/182 (18%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ ++I+A+ +I+ S+ E + MV YG+ G + A +M+
Sbjct: 294 WQAVISAFEKISKPSRTE-----------------FGLMVKFYGRRGDMHRARETFERMR 336
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
A+G P IY SL+ + +++ + ++M+ + V+Y+ ++ +++A +
Sbjct: 337 ARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAE 396
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+++E + ++ +I G ++ + +E L+++M+ EG +YH+ M
Sbjct: 397 AADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMM 456
Query: 582 NA 583
+
Sbjct: 457 DG 458
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 91/239 (38%), Gaps = 38/239 (15%)
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
W AV + IS+ P + + ++ Y R +A + F M+ +G Y+S+
Sbjct: 294 WQAVISAFEKISK---PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSL 350
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEP--------------------------------- 467
+ Y + +A+ V KMK +G E
Sbjct: 351 IHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHK 410
Query: 468 --NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
N IY ++ H + N+ + E L +EME + Y T++ Y + +
Sbjct: 411 TLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV 470
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + G G ++ +++K+ +I + +++ + MK EG K + + Y +N
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 529
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/503 (20%), Positives = 198/503 (39%), Gaps = 7/503 (1%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
Q PD F+ +H + K QE + K+ P T + I+ L +
Sbjct: 210 QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKR--GVCPNLFTFNIFIQGLCRKGAI 267
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
D L E + PD + + L+ + K A L + G E +N+
Sbjct: 268 DEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G+ K M + + G + D Y ++ GD + A+F E +
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
S +Y L L K G +AL+ +DM E G D Y ++ + +
Sbjct: 388 KH---SIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A + +A KG + D L+ Y ++ ++K ++++++M + + ++N
Sbjct: 445 ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G K R V ++ ++ +GC P +TY +I ++C+ S+A ++F EM+ +G
Sbjct: 505 GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKM-KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+V +++ G + A L + K + I+N +++ N+ EKL
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKL 624
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+ +M PD +Y +I +Y + D+ F E G V G ++
Sbjct: 625 FHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCV 684
Query: 552 LSQIEELVKLLQDMKSEGTKLDE 574
++ E V ++ M G +E
Sbjct: 685 THRLSEAVVIINLMVQNGIVPEE 707
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/499 (20%), Positives = 205/499 (41%), Gaps = 78/499 (15%)
Query: 111 PEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCS-RLVASCVRARKFK 169
P + + + +L+ Y S+ + + +D IY PD +T + R+ + C+ R
Sbjct: 109 PSVQSYNAIMNILVEYGYFSQAHKVYMRM-KDIGIY---PDVYTHTIRMKSFCITGRPTA 164
Query: 170 IANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
L + E +++ + + G+ K + ++++M GI D + +++
Sbjct: 165 ALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIH 224
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
K G+ ++ LF + R + F+ + I L + G EA + + +G
Sbjct: 225 VLCKKGNVQESEKLFSKVMKRGVCPNLFT---FNIFIQGLCRKGAIDEAARLLESIVSEG 281
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
+ D Y +LIC F +++ AE C
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAE-----------------CY---------------- 308
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+ M N+ ++ ++ I+NGF K A K+ + +G IP + TY+S+IN
Sbjct: 309 --LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGL 366
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK-------- 461
C ++A VF E +KGF ++ Y+++V K G + A+ L+ M
Sbjct: 367 CNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDI 426
Query: 462 ---------------------------AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
AKGC P+++ +N+L+D + + +N+ + ++
Sbjct: 427 WTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M +TPD ++Y T+++ +AR+ D V + G + I++ F K +
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546
Query: 555 IEELVKLLQDMKSEGTKLD 573
+ E ++L ++MK+ G D
Sbjct: 547 VSEAMELFKEMKTRGLTPD 565
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 192/460 (41%), Gaps = 16/460 (3%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTI 206
+ PD T ++L+ + + + L + G L FN + G +
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAA 271
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH--MYKI 264
+ E + S G+ D Y ++ + K S+ V A EC K+ ++ + Y
Sbjct: 272 RLLESIVSEGLTPDVISYNTLICGFCK--HSKLVEA---ECYLHKMVNSGVEPNEFTYNT 326
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
+ + K+G A K RD KG + D Y+SLI + ++ A +F EA EKG
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ LV ++GLV + L +++ M +VNG K A
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+ I++GCIP T+ ++I+ YC+ KA ++ M G V+ Y++++
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K ++ + + M KGC PN+ YN L++ + + + + +L+KEM+ R +TPD
Sbjct: 507 CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDI 566
Query: 505 VSYTTVISAYNRAREFD----MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
V+ T+I E D + V E++ + AI IM+ F + + K
Sbjct: 567 VTLCTLICGLCSNGELDKAYELFVTIEKEYKFS---YSTAIFNIMINAFCEKLNVSMAEK 623
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAG-LQMQAQWLQQN 599
L M D Y +++ G + + +L +N
Sbjct: 624 LFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLEN 663
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 151/413 (36%), Gaps = 66/413 (15%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
RD+ + +PD + S ++G+ D +Y +K F+ L++ L
Sbjct: 345 RDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK--GFKHSIILYNTLVKGLS 402
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LL 187
+ + L +D + PD T + +V + AN +L I G I +
Sbjct: 403 KQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIF 462
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
FN+ + GY K I + + M S GI D Y ++ C
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL---------------C 507
Query: 248 KSRKLDS-------------TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
K+RKLD+ TP + Y IL +S K + EA++ F++MK +G+ D
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTP-NIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDI 566
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
+LIC S E+ A ELF E
Sbjct: 567 VTLCTLICGLCSNGELDKAYELFVTIE--------------------------------- 593
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
K K S I ++N F ++ A K++ ++ C P TY +I++YC+
Sbjct: 594 -KEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGN 652
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
A +E KG ++ T R+ +A+ ++ M G P
Sbjct: 653 IDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 148/337 (43%), Gaps = 14/337 (4%)
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM-LRD 328
G+ G+ EA+ F M +PS+ S+ +I + + F +A + M ++D
Sbjct: 87 GRKGKVQEAVNVFERMDFYDC--EPSVQ-----SYNAIMNILVEYGYFSQAHKVYMRMKD 139
Query: 329 ----PEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
P+V + M + G L ++ +M + + CA+++GF K
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A ++++++ QG P +T+ +I+ C+ ++EK+F ++ ++G + ++ +
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ G I +A L+ + ++G P+V YN+L+ + L + E +M V P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
++ +Y T+I+ + +A K + G + D ++ + + +
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
+ +G K LY++ + L GL +QA L ++
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKD 416
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 38/299 (12%)
Query: 342 EGLVEKTLDVVESM-KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
G E DV+ M KN K+ + + I+ + ++ AV V+E++ C P
Sbjct: 53 HGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQ 112
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
+Y +I+N +S+A KV++ M+ G V ++ + + TGR A+ L+ M
Sbjct: 113 SYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNM 172
Query: 461 KAKGCE-----------------------------------PNVWIYNSLMDMHGRAKNL 485
+GCE P++ +N L+ + + N+
Sbjct: 173 PGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNV 232
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
++ EKL+ ++ +R V P+ ++ I R D + G D +
Sbjct: 233 QESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTL 292
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN--FEG 602
+ F K S++ E L M + G + +E Y++ +N AG+ A + ++ F+G
Sbjct: 293 ICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG 351
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/531 (22%), Positives = 218/531 (41%), Gaps = 46/531 (8%)
Query: 75 TAVPDAKKFDSFLHGMLKDPQTQE-LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
+ +PD L G+ + ++QE L + + P+ + +I +
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDS 212
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSA 192
D S + + PD T S ++A+ + + A +L + +G + + +NS
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSI 272
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY I +KM+S G+ D Y +M
Sbjct: 273 LHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLM------------------------ 308
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D L K+GR+ EA K F M ++G+ D + Y +L+ +A+ +
Sbjct: 309 --------------DYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVE 354
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
L G+ D V L+ Y ++ V++ + V M+ L + A++
Sbjct: 355 MHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIG 414
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
K A+ +EQ+I +G P + Y S+I++ C + KAE++ +EM +G
Sbjct: 415 ILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL 474
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+ ++S++ + K GR+ ++ L M G +PNV Y++L+D + A + + KL
Sbjct: 475 NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLL 534
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG---GVIDRAIAGIMVGVF 549
M + PD V+Y T+I+ Y R D + + E +G +I I I+ G+F
Sbjct: 535 SSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI--ILQGLF 592
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ +L + GT+L+ Y+ ++ L L +A + QN
Sbjct: 593 HT-RRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 642
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/501 (18%), Positives = 208/501 (41%), Gaps = 6/501 (1%)
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
D + PD + + ++G K+ + + AY Y+E P+ T +I L +
Sbjct: 186 DDRGGGSAPDVVSYTTVINGFFKEGDSDK-AYSTYHEMLD-RRISPDVVTYSSIIAALCK 243
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLA 188
+ D + + V+P+ T + ++ + + K A L+ +DG E ++
Sbjct: 244 GQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+NS M K +++ M G+ D YC +++ Y G ++ AL L+
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHAL-LDLM 362
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
R + H++ IL + K + EA+ F M++ G+ + Y ++I
Sbjct: 363 VR--NGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
V A F++ ++G+ + V L+ +K +++ M + + ++
Sbjct: 421 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFN 480
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+I++ K + K+++ ++ G P +TY+++I+ YC +A K+ M
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV 540
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G V Y++++ Y + R+ DA+ L +M + G PN+ YN ++ +
Sbjct: 541 GMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 600
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
++L+ + + + +Y ++ + D ++ + + ++ IM+G
Sbjct: 601 KELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 660
Query: 549 FSKLSQIEELVKLLQDMKSEG 569
K+ + +E L S G
Sbjct: 661 LLKVGRNDEAKDLFVAFSSNG 681
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 98/514 (19%), Positives = 193/514 (37%), Gaps = 82/514 (15%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY---------- 196
V P HT L+ C RA + + L + G + + F + G
Sbjct: 83 VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 197 -----------------------------NKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
N+ + + + G D Y +
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
+ ++K GDS+K + + E R++ + Y + +L K +A++ M +
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVT---YSSIIAALCKGQAMDKAMEVLTTMVK 259
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLV 345
G++ + Y S++ + S + K A K+ G+ +P+V LM + G
Sbjct: 260 NGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGV--EPDVVTYNSLMDYLCKNGRS 317
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+ + +SM L+ C ++ G++ + + + ++ G P + +
Sbjct: 318 TEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNIL 377
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
I AY + +A VF +M+Q G + VV Y +++ + K+G + DAM +M +G
Sbjct: 378 ICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL 437
Query: 466 EPNVWIYNSLMD---------------------------------MHGRAKNLRQV--EK 490
PN+ +Y SL+ +H K R + EK
Sbjct: 438 TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK 497
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L+ M R V P+ ++Y+T+I Y A + D K + G D ++ +
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYC 557
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++S++++ + L ++M S G + Y+ + L
Sbjct: 558 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 214/487 (43%), Gaps = 15/487 (3%)
Query: 95 QTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHT 154
Q L D EA P RP + +++R L S++ D V+L + V D T
Sbjct: 95 QALSLLADMSREAH--PAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVT 152
Query: 155 CSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMK 213
L+ A + A LL G ++ ++ + GY + + V+E+M
Sbjct: 153 YGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMS 212
Query: 214 SAGIVLDSGCYCQIMEAYYK---IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
G+ D + ++ K IG + KV + ++ R L+ + Y +L + L
Sbjct: 213 RLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQ---RGLEPNVVT---YNVLINCLC 266
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
K G EAL +M +KG+ D Y +LI + + E+ A L +E + L +P+
Sbjct: 267 KEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPD 326
Query: 331 VCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
V ++ + G + + + V E M + ++ GF + A+ +
Sbjct: 327 VVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMS 386
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+LIS G P TY+ +IN + ++ +AE M Q+G + Y ++A + G
Sbjct: 387 ELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLG 446
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ AM L +M C + Y+++M ++ +++ ++L ++M + PD V+Y+
Sbjct: 447 MMEQAMVLFNEMDMN-CGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYS 505
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I+ + + + + + + +G V D A+ ++ +S QI +++ L+ +M+++
Sbjct: 506 ILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAK 565
Query: 569 GTKLDER 575
+D +
Sbjct: 566 NVAIDPK 572
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 162/386 (41%), Gaps = 11/386 (2%)
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM-YKILCDSLGKSGRAF 276
V D+ Y ++ A + G + A L SR+ + Y ++ L S R
Sbjct: 73 VRDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTD 132
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
EA+ R M+ G+ D Y +LI E+ A EL E G+ P V +
Sbjct: 133 EAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGV--HPNVIVYSC 190
Query: 337 LM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
L+ Y G + V E M ++ + ++ K+ AVKV + ++ +G
Sbjct: 191 LLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRG 250
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
P VTY +IN C+ +A + EM KG VV Y++++A + AM
Sbjct: 251 LEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAM 310
Query: 455 WLVAKMKAKG--CEPNVWIYNSLMDMHGRAK--NLRQVEKLWKEMERRKVTPDKVSYTTV 510
L+ +M EP+V +NS+ +HG K +RQ + + M R + V+Y +
Sbjct: 311 GLLEEMIQGDTLVEPDVVTFNSV--IHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYL 368
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
I + R + +M + +E +G D I++ FSKL +++ L+ M G
Sbjct: 369 IGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGI 428
Query: 571 KLDERLYHSAMNALRDAGLQMQAQWL 596
+ + Y + AL G+ QA L
Sbjct: 429 RAELFHYIPLLAALCQLGMMEQAMVL 454
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 7/271 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T +I L + + +S+ E + + T + L+ +R K +A L
Sbjct: 325 PDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNL 384
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ I+ G E ++ + G++KL + M GI + Y ++ A +
Sbjct: 385 MSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQ 444
Query: 234 IGDSEKVAALFLECKSR-KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+G E+ LF E LD+ +ST MY KSG A + +DM ++G+
Sbjct: 445 LGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGAC-----KSGDIKAAKQLLQDMLDEGLAP 499
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
D Y+ LI FA + +++ AE + K+ G + D V L+ Y EG + K LD++
Sbjct: 500 DAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLI 559
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
M+ + I C +V + W+A
Sbjct: 560 HEMRAKNVAIDPKFICTLVRLPQQMPLLWSA 590
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 207/476 (43%), Gaps = 67/476 (14%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+L Y + WD I+ L ++ + + D TCS ++++C R A +
Sbjct: 273 MLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSS 332
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G E + +N+ + + K +Y + + ++M+ LDS Y +++ AY + G E+
Sbjct: 333 GYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEE- 391
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
A ++ +RK + Y + ++ G++G+ +AL+ F MK+ G + +
Sbjct: 392 GATVIDTMTRK--GVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPN------- 442
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+C++ SI + L K++ + M++ ++ M+
Sbjct: 443 VCTYNSILAL-----LGKKSRSEEMIK-----------------------ILSDMR---- 470
Query: 361 KISDCISCAIVNGFSKRRGYWAAV--------------KVYEQLISQGCIPGQVTYASII 406
+NG R W + V+ ++ + G PG+ T+ ++I
Sbjct: 471 ----------INGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLI 520
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
+AY R A K++ EM + GF C Y++++ + G + A ++ M+ KG +
Sbjct: 521 SAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFK 580
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
PN ++ ++ + + N+R +E++ K++ ++ P V T+I A + R +
Sbjct: 581 PNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERA 640
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ E NG D I M+ +F+K + E K+L ++ G + D Y+S MN
Sbjct: 641 FEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMN 696
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/488 (21%), Positives = 213/488 (43%), Gaps = 19/488 (3%)
Query: 80 AKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSL 139
A+ FDS L+ + +++ L D + K L + + LL ++V + S+
Sbjct: 139 AEPFDS-LNALFDSVKSELLEVDIVSLLKALDVLGKSERAI-LLFEWVVSN-------SV 189
Query: 140 SEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGGYNK 198
S D K+ D+ ++ R K+ IA LL ++ I + + A + + Y++
Sbjct: 190 SGDVKL-----DSKAVELMIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSR 244
Query: 199 LHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS-EKVAALFLECKSRKLDSTPF 257
Y I ++E+MK G+ Y +++ Y K+G S +K+ L E ++ L F
Sbjct: 245 NGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEF 304
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ C G+ G EA +FF ++K G Y +L+ F A +
Sbjct: 305 TCSTVISAC---GREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL 361
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
KE E+ D +LV Y+ G E+ V+++M + + ++N + +
Sbjct: 362 KEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRA 421
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A++++ Q+ GC+P TY SI+ + + + K+ +M+ G + +
Sbjct: 422 GKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITW 481
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++++AM G G+ + + +MK G EP +N+L+ +GR + K++ EM +
Sbjct: 482 NTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMK 541
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
TP +Y +++A R ++ + R G + +M+ ++K +
Sbjct: 542 AGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG 601
Query: 558 LVKLLQDM 565
L ++ +D+
Sbjct: 602 LERIGKDI 609
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 170/372 (45%), Gaps = 8/372 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T ++ L + + + ++ + D +I P+ T + L+A C K K N +
Sbjct: 441 PNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHV 500
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ G E FN+ + Y + +Y++M AG + Y ++ A +
Sbjct: 501 FREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALAR 560
Query: 234 IGDSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
GD + ++ L+ +++ K + T FS ++ C + G + R E + +D+ + I
Sbjct: 561 RGDWKAAESVLLDMRNKGFKPNETSFSLMLH---CYAKGGNVRGLE--RIGKDIYDGQIF 615
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ +LI + V+ E F+E + G D + ++ ++ + + E+ +
Sbjct: 616 PSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKM 675
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++ ++ + L+ +++N +++R W A ++ + LI G P V+Y +II +CR
Sbjct: 676 LDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCR 735
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
L +A +V EM +G C+ Y++ V+ Y G + +++ M K C+PN
Sbjct: 736 QGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELT 795
Query: 472 YNSLMDMHGRAK 483
Y ++D + +A+
Sbjct: 796 YKIIVDGYCKAR 807
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 171/353 (48%), Gaps = 5/353 (1%)
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE-DPSI 296
+ + ALF KS L+ S + K L D LGKS RA ++ G ++ D
Sbjct: 143 DSLNALFDSVKSELLEVDIVS--LLKAL-DVLGKSERAILLFEWVVSNSVSGDVKLDSKA 199
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
+I ++ +A +L + D C ++ Y G ++ + + E MK
Sbjct: 200 VELMIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMK 259
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+ L S +++ + K W + + +++ ++G + T +++I+A R L
Sbjct: 260 DCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLI 319
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
++A++ F+E++ G++ V Y++++ ++GK G +A+ ++ +M+ C + YN L
Sbjct: 320 NEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNEL 379
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ + RA + + M R+ V P+ V+YTTVI+AY RA + ++ +N+ + +G
Sbjct: 380 VAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGC 439
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
V + ++ + K S+ EE++K+L DM+ G + +++ + D G
Sbjct: 440 VPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKG 492
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/155 (18%), Positives = 66/155 (42%), Gaps = 1/155 (0%)
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
M+ + G+ + A+ L+ K+ +V +++ + R +Q +++ M+
Sbjct: 203 MIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCG 262
Query: 500 VTPDKVSYTTVISAYNR-AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
++P V+Y ++ Y + R +D + +E R G D ++ + I E
Sbjct: 263 LSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEA 322
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ ++KS G + Y++ + AG+ +A
Sbjct: 323 KEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEA 357
>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 660
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 167/383 (43%), Gaps = 15/383 (3%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----CKSRKLDSTPFSTHMYKILC 266
++S G+ L Y ++ Y + G + V F E C+ +D + + K C
Sbjct: 146 VRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCC 205
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
L + K++ KG+ P Y+ I + ++L EEL + + G
Sbjct: 206 FDLVE--------KYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFS 257
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG-FSKRRGYWAAVK 385
D C + ++ + L +VE M+ K I D ++ V G + + AV
Sbjct: 258 PDIWACNIYIDCLCKQNRLHDALQMVEKMR-GKGTIPDVVTYTTVVGCLCNNKRFSEAVG 316
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++E+++ G P V ++I C+ + +A ++ M + V Y+++++ +
Sbjct: 317 LWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFW 376
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+ G I A +++ M+ GCEP V YN L++ + + + E L +ME V PD+
Sbjct: 377 RAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRY 436
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
SY ++ + + D F ++ GG D I++ F K+ +++ ++L ++M
Sbjct: 437 SYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEM 496
Query: 566 KSEGTKLDERLYHSAMNALRDAG 588
+G + D Y + +N L G
Sbjct: 497 DYKGMQADAVTYGTLINGLFSVG 519
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 208/484 (42%), Gaps = 63/484 (13%)
Query: 163 VRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSG 222
VR++ + +L ++ ++ G + F+S +G ++++ M + + G+++ +
Sbjct: 146 VRSQGVALHRSLYRILLS-GYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNC 204
Query: 223 CYCQIMEAYYKIGDSEK-----------VAALFLECKSRK----------LDSTPFSTHM 261
C+ ++E YY + S+ ++AL C+S + +D FS +
Sbjct: 205 CF-DLVEKYYGMALSKGLCLTPFTYSRWISAL---CQSNRIELVEELLADMDRFGFSPDI 260
Query: 262 Y--KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ I D L K R +AL+ M+ KG + D Y +++ + A L++E
Sbjct: 261 WACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEE 320
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G+ D C L+ + VE+ ++ M + +++S I A+++GF +
Sbjct: 321 MVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGS 380
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A + + + GC PG VTY ++N YC I + KAE + +M+ G + +Y+
Sbjct: 381 IDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQ 440
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ KT ++ A V+ G ++ N L+D + K ++ +L+KEM+ +
Sbjct: 441 LLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKG 500
Query: 500 VTPDKVSYTTVISA------YNRAREF---------DMCVKFYN---EFRMNGGVIDRA- 540
+ D V+Y T+I+ YN A E D V YN G + RA
Sbjct: 501 MQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQ 560
Query: 541 ----------------IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ K S+ E + L +DM+++G + D + +N L
Sbjct: 561 KIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGL 620
Query: 585 RDAG 588
D G
Sbjct: 621 LDEG 624
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/430 (20%), Positives = 181/430 (42%), Gaps = 10/430 (2%)
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE 183
I L QS + + + L D + PD C+ + + + A +++ G
Sbjct: 232 ISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGT 291
Query: 184 IA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS-GCYCQIMEAYYKIGDSEKVA 241
I ++ + + +G + + ++E+M G+ D C I + + + KV
Sbjct: 292 IPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALI----FGLCKNSKVE 347
Query: 242 ALFLECKSRKLD-STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
F E SR L + S +Y L ++G +A M+ G Y L
Sbjct: 348 EAF-ELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNIL 406
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ + +I ++ AE L + E G+ D +L+ + ++K V
Sbjct: 407 LNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVG- 465
Query: 361 KISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
D +SC I ++ F K + +A+++++++ +G VTY ++IN + Y+ AE
Sbjct: 466 GFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAE 525
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
++F +M + D V Y+ M+ K G ++ A + M K P++ YN+L+
Sbjct: 526 ELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWL 585
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
G+ + L+K+M + V PD +++ +I+ + + + NG ++DR
Sbjct: 586 GKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGIILDR 645
Query: 540 AIAGIMVGVF 549
++ ++ V
Sbjct: 646 EVSERLISVL 655
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 8/225 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ + L++ L ++ + D + D D +C+ L+ + + +K K A L
Sbjct: 433 PDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALEL 492
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ G A + + + + G + Y ++E+M A I + Y ++ K
Sbjct: 493 FKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCK 552
Query: 234 IGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+GD ++ +FL +++ D ++T +Y LGK+ RA EAL F+DM+ KG+
Sbjct: 553 VGDLKRAQKIFLHMIQKEILPDIVTYNTLIYW-----LGKNSRAMEALDLFKDMRTKGVE 607
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
D + LI LA E+++ E G++ D EV +L+
Sbjct: 608 PDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGIILDREVSERLI 652
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 150/304 (49%), Gaps = 4/304 (1%)
Query: 186 LLAFNSAMGGYNKLHMYYSTIL-VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
L+ +N+ + K + + +L ++++M G+ D + ++ K G E +L
Sbjct: 147 LVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLS 206
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E +R +D F+ Y L D++ K G+ A + +M K IL + Y+++I +
Sbjct: 207 CEMVNRGIDQDIFT---YNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGY 263
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
A + A LF E + G+ D L+ +Y + G E+ +DV M+N+ ++
Sbjct: 264 AKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDV 323
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
A++ G+ K+ Y KV+E++ ++ P +TY+++I+ Y + LY +A VF E
Sbjct: 324 VTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFRE 383
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
++ G VV YS+++ K G + A+ L+ +M +G PNV YNS++D GR
Sbjct: 384 FKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPAT 443
Query: 485 LRQV 488
V
Sbjct: 444 TESV 447
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 159/329 (48%), Gaps = 3/329 (0%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--CSFASITEVKLAEE 315
+ + + + + G+SG EA+K F MK+ G+ + Y ++I C + E K E
Sbjct: 111 TVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGV-EFKRVLE 169
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F E GM D L+ + + GL E + M N + +++
Sbjct: 170 IFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVC 229
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A ++ ++ ++ +P VTY+++I+ Y + A +F EM+ G V
Sbjct: 230 KGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRV 289
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+Y++++++Y K GR +AM + +M+ G +V YN+L+ +G+ V K+++EM
Sbjct: 290 SYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEM 349
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ R V+P+ ++Y+T+I Y++ + + + EF+ G D + ++ K +
Sbjct: 350 KARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLV 409
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNAL 584
E V LL +M EG + + Y+S ++A
Sbjct: 410 ESAVSLLDEMTKEGIRPNVVTYNSIIDAF 438
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 164/343 (47%), Gaps = 3/343 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDM--KEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
Y L LG G +A+ F +E+ E + +++I + + +V++A+ +FK
Sbjct: 43 YVFLLRELGNRGDCKKAICCFEFAVKRERKKNEQGKLASAMISTLGRLGKVEMAKTVFKA 102
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
A +G ++ Y G + + + SMK+ LK + A+++ K
Sbjct: 103 ALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGV 162
Query: 380 YWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ V +++++++ G P ++T+ S++ + L+ A + EM +G D+ + Y+
Sbjct: 163 EFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYN 222
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ K G++ A ++++M AK PNV Y++++D + +A L L+ EM+
Sbjct: 223 TLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFL 282
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
++ D+VSY T++S Y + F+ + E +G D ++G + K + + +
Sbjct: 283 GISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVV 342
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
K+ ++MK+ + Y + ++ GL +A + + F+
Sbjct: 343 RKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFK 385
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 166/412 (40%), Gaps = 37/412 (8%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
T L+ + + + D + + N+LP+ T S ++ +A + A L
Sbjct: 220 TYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEM 279
Query: 179 ITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
G + +++N+ + Y KL + + V +M+++GI D Y ++ Y K
Sbjct: 280 KFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKY 339
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
+ V +F E K+R + + Y L D K G EA+ FR+ K+ G+ D +Y
Sbjct: 340 DVVRKVFEEMKARHVSPNLLT---YSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLY 396
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++LI + V+ A L E ++G+ + ++ + E +D ++ +
Sbjct: 397 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVD--DAGQT 454
Query: 358 AKLKISDCISCAIV------------NGFSKRRGYWAAVKVYEQLISQG----CI----- 396
++L+I S A+ N K G AA K + S G CI
Sbjct: 455 SELQIDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQAKNSGGQEMMCILGVFH 514
Query: 397 --------PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
P VT+++I+NA R + +A + E++ FD V + + M +
Sbjct: 515 KMHELEIKPNVVTFSAILNACSRCNSFEEASMLLEELRL--FDNQVYGVAHGLLMGYREN 572
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
A L ++K YN+L DM R + + E +RR+V
Sbjct: 573 VWEQAQSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQV 624
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 164/336 (48%), Gaps = 4/336 (1%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--CSFASITEVKLAEE 315
+ + + L + G+SG EA+K F MK G++ + Y ++I C + E K E
Sbjct: 224 TVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGV-EFKKVVE 282
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F G+ D L+ + GL E + +M + + +++
Sbjct: 283 IFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVC 342
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A ++ ++ ++ +P VTY+++I+ Y ++ A +F EM+ G V
Sbjct: 343 KGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRV 402
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+Y++++++Y K GR A+ + +M+ G +V YN+L+ +G+ +V ++++EM
Sbjct: 403 SYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEM 462
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+R +V+P+ ++Y+T+I Y++ + ++ + EF+ G D + ++ K +
Sbjct: 463 KRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLV 522
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNAL-RDAGLQ 590
E V LL +M EG + + Y+S ++A R A Q
Sbjct: 523 ESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQ 558
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 149/298 (50%), Gaps = 4/298 (1%)
Query: 186 LLAFNSAMGGYNKLHMYYSTIL-VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
L+ +N+ + K + + ++ +++ M S G+ D + ++ + G E LF
Sbjct: 260 LVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLF 319
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ +D F+ Y L D++ K G+ A + +M K IL + Y+++I +
Sbjct: 320 SAMVDKGIDQDIFT---YNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGY 376
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
A + + A +F E + G+ D L+ +Y + G E+ LDV + M+NA ++
Sbjct: 377 AKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDV 436
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
A++ G+ K+ Y +V+E++ P +TY+++I+ Y + LY +A +VF E
Sbjct: 437 VTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFRE 496
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
+Q G VV YS+++ K G + ++ L+ +M +G PNV YNS++D GR+
Sbjct: 497 FKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRS 554
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 163/343 (47%), Gaps = 3/343 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFR--DMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
Y L LG G + +A++ F +E G E + +++I + + +V+LA+ +F
Sbjct: 156 YTFLLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDT 215
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR- 378
A ++G + L+ Y G + + V +SMK+ L + A+++ K
Sbjct: 216 ALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGV 275
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ V++++ ++S G P ++T+ S++ R L+ A ++F M KG D+ + Y+
Sbjct: 276 EFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYN 335
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ K G++ A ++++M K PNV Y++++D + + L ++ EM+
Sbjct: 336 TLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFL 395
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
V D+VSY T++S Y + F+ + E G D ++ + K + +E+
Sbjct: 396 GVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEV 455
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
++ ++MK + Y + ++ GL +A + + F+
Sbjct: 456 RRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFK 498
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 174/417 (41%), Gaps = 42/417 (10%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYST 205
V PD T + L+A C R ++ A L + G + + +N+ + K
Sbjct: 291 GVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLA 350
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK--SRKLDSTPFSTHMYK 263
+ +M + I+ + Y +++ Y K+G + +F E K LD ++T
Sbjct: 351 FEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNT---- 406
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
L K GR +AL ++M+ GI +D Y +L+ + +F+E +
Sbjct: 407 -LLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRG 465
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
+ + L+ +Y + GL ++ ++V K A LK + A+++ K ++
Sbjct: 466 RVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESS 525
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
V + +++ +G P VTY SII+A+ R S + + ++ + V + SS+V
Sbjct: 526 VTLLDEMTKEGIRPNVVTYNSIIDAFGR----SASAQCVVDDSGETTALQVESLSSIVVQ 581
Query: 444 YGKTGRIRDA-----MWLVAKMKA-KGCEPNVWIYNSLMDMHGRAKNLRQVEKL-----W 492
+ D + + K+ A K CE AKN + E L +
Sbjct: 582 EAIESQAADKEDNRIIEIFGKLAAEKACE---------------AKNSGKQEILCILGVF 626
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
++M K+ P+ V+++ +++A +R F+ E R+ D + G+ G+
Sbjct: 627 QKMHELKIKPNVVTFSAILNACSRCDSFEDASMLLEELRL----FDNQVYGVAHGLL 679
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 144/332 (43%), Gaps = 10/332 (3%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI-----CSFASITEVKLAEEL 316
Y L + L GR EA+ +M +KGI +P++Y I C +E A EL
Sbjct: 275 YSTLINGLCSEGRLEEAMDMLEEMVQKGI--EPTVYTYTIPLVSLCDAGCSSE---AVEL 329
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ +++G + + + L+ +G E + + M L + A++N
Sbjct: 330 LGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCV 389
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A +++ ++S G +P TY II +C + KA +F +M + G V+
Sbjct: 390 EGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVIT 449
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++++ Y K G + +AM L+ MK G +P+ W Y L+ R L L+ M
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMM 509
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
++P+ V+YT +I Y + D + + + +G + +M+ FSK + I
Sbjct: 510 EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSIS 569
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E M +G + Y S ++ L G
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFIDGLCRNG 601
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 112/514 (21%), Positives = 217/514 (42%), Gaps = 8/514 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P++ + + ++G+ + + +E A D E + P T + + L + V
Sbjct: 270 PNSVTYSTLINGLCSEGRLEE-AMDMLEEMVQ-KGIEPTVYTYTIPLVSLCDAGCSSEAV 327
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGY 196
L K +P+ T + L++ R KF+IA L + DG + + +N+ +
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + +++ M S G + + Y +I++ + +GD +K +F K K S+P
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD--KMLKAGSSP 445
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y L K G A++ MK G+ D Y LI F+ +++ A L
Sbjct: 446 -NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F E G+ + ++ Y V+ L + M + S +++GFSK
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A +++ QG +P +TY S I+ CR A K+F EM+++ + +
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624
Query: 437 YSSMVAMYGKTGRIRDA-MW-LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
YSS++ + GR DA M+ L+A++ GCEPNV Y +L+ + ++L
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+++ + P + Y ++ + + + + + G + + ++ K +
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
IEE + Q M + DE + ++ L G
Sbjct: 745 IEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEG 778
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/418 (19%), Positives = 169/418 (40%), Gaps = 6/418 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKK-WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
RP T +I L + + ++ + +S F+ Y+ P+A T + L+ R +A
Sbjct: 199 RPSLLTFNTMINILCKKGRVQEAKLIMSHIFR-YDAYPNAFTYTSLILGHCRNHNLDLAF 257
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + DG + + +++ + G + + E+M GI Y + +
Sbjct: 258 AMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSL 317
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
G S + L + K R P + + L L + G+ A+ + M G++
Sbjct: 318 CDAGCSSEAVELLGKMKKR--GCVP-NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLV 374
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
Y +LI + A +FK G L + +++ + G ++K + +
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVI 434
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+ M A + ++ G+ K+ A+++ E + G P TY +I+ + R
Sbjct: 435 FDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
A +F M + G V Y++++ Y ++ DA+ L KM G P+
Sbjct: 495 GGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQT 554
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
YN ++ + ++ + E +M ++ + P+ ++YT+ I R + K ++E
Sbjct: 555 YNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHE 612
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/475 (17%), Positives = 190/475 (40%), Gaps = 12/475 (2%)
Query: 57 NASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE-FRP 115
+A + +EL + VP+ + F + + G+ +D + E+A Y+ K L + P
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKF-EIAIGLYH--KMLADGLVP 375
Query: 116 EKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL 175
T LI L ++++ ++ + + LP T + ++ + A +
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435
Query: 176 QVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
+ G ++ +N+ + GY K + + + E MK G+ D+ Y +++ + +
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
G E +LF + + Y + D + +AL F M E G L
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVT---YTAIIDGYFNLAKVDDALALFWKMVESGNLPSS 552
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
Y +I F+ + AE + ++G+L + + G +
Sbjct: 553 QTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHE 612
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE---QLISQGCIPGQVTYASIINAYCR 411
M+ + +++ G + G ++Y +L GC P TY +++ C
Sbjct: 613 MEKRNYFPNLYTYSSLIYGLCQE-GRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCG 671
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+A+++ + MQ+KG Y +++ K ++ A+ + M G + ++
Sbjct: 672 EGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSD 731
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
Y +L+ + + + + +++ M + D+V++T ++ + E D+C+K
Sbjct: 732 YKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKL 786
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 91/211 (43%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++ G + A ++++++ GC P VTY+++IN C +A + EM QK
Sbjct: 242 SLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQK 301
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G + V Y+ + G +A+ L+ KMK +GC PN+ + +L+ R
Sbjct: 302 GIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIA 361
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
L+ +M + P V+Y +I+ F+ + +G + ++
Sbjct: 362 IGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKC 421
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
F + I++ + + M G+ + Y++
Sbjct: 422 FCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/202 (18%), Positives = 88/202 (43%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A +Y ++++ G P +T+ ++IN C+ +A+ + + + Y+S++
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ + + A + +M GC+PN Y++L++ L + + +EM ++ + P
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+YT + + A V+ + + G V + ++ S+ + E + L
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLY 365
Query: 563 QDMKSEGTKLDERLYHSAMNAL 584
M ++G Y++ +N L
Sbjct: 366 HKMLADGLVPTTVTYNALINQL 387
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 76/176 (43%), Gaps = 35/176 (19%)
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A ++I+M G ++ +++M+ + K GR+++A +++ + PN + Y SL+
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
H R NL ++ M + P+ V+Y+T+I+ +C +
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLING--------LCSE------------ 285
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
++EE + +L++M +G + Y + +L DAG +A
Sbjct: 286 ---------------GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEA 326
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/467 (18%), Positives = 213/467 (45%), Gaps = 18/467 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + +F+ GM K T A + + +++ +P +I L + +
Sbjct: 215 PDQITYGTFVDGMCKMGDTVS-ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSH 273
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGG 195
+L + + + P+ T + ++ + ++ A LLQ + + +I+ ++ +N+ +
Sbjct: 274 NLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEML-ERKISPNVVTYNALINA 332
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K ++ +Y++M GI+ ++ Y +++ + K + +F ++
Sbjct: 333 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 392
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
F+ + L D + R + ++ +M +G++ + Y +LI F + ++ A +
Sbjct: 393 VFT---FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALD 449
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS----------DC 365
L ++ G+ D C L+ + G ++ L++ ++M+ +K+ + D
Sbjct: 450 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDV 509
Query: 366 ISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
++ I + G + A ++YE++ +G +P +TY+S+I+ C+ + +A ++F+
Sbjct: 510 LTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVS 569
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M K F VV +++++ Y K GR+ D + L +M +G + IY +L+ + N
Sbjct: 570 MGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGN 629
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+ +++EM V PD ++ +++ + E + V + +
Sbjct: 630 INGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/536 (20%), Positives = 227/536 (42%), Gaps = 20/536 (3%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I+L D +P F+ + +++ + +L Y + ++ + R + + +LI
Sbjct: 66 IDLFSDMLRSRPLPSVIDFNKLMGAVVR-MERPDLVISLYQKMER-KQIRCDIYSFTILI 123
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGE 183
+ K +S + PD T + L+ C+ R + + Q+ D
Sbjct: 124 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD-- 181
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
+L F + M G + + + ++M G+ D Y ++ K+GD+ V+AL
Sbjct: 182 --VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDT--VSAL 237
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
L K ++ + +Y + D L K GR ++ F +M++KGI + Y +I
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
F A+ L +E E+ + + L+ +++EG + ++ + M + +
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
++++GF K+ AA ++ + ++GC P T+ ++I+ YC ++
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM ++G V Y++++ + G + A+ L +M + G P++ N+L+D
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477
Query: 484 NLRQVEKLWKEMERRK-----------VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
L+ +++K M++ K V PD ++Y +I +F + Y E
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 537
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G V D M+ K S+++E ++ M S+ + +++ +N AG
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG 593
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 104/255 (40%), Gaps = 15/255 (5%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
T LI ++ + LS+ V PD TC+ L+ K K A + +
Sbjct: 430 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489
Query: 179 ------------ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQ 226
E +L +N + G + +YE+M GIV D+ Y
Sbjct: 490 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 549
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
+++ K ++ +F+ S+ + + L + K+GR + L+ F +M
Sbjct: 550 MIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT---FNTLINGYCKAGRVDDGLELFCEMG 606
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
+GI+ D IY +LI F + + A ++F+E G+ D ++ + + +E
Sbjct: 607 RRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELE 666
Query: 347 KTLDVVESMKNAKLK 361
+ + ++E ++ +L+
Sbjct: 667 RAVAMLEDLQRYQLE 681
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/519 (20%), Positives = 221/519 (42%), Gaps = 40/519 (7%)
Query: 120 LKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
+++L+R L + ++ L + + + + D + ++ + R K++ A L +
Sbjct: 185 IEILVRILGRESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMK 244
Query: 180 TDG-EIALLAFNSAMGGYNKLHMYYSTIL-VYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
G L+ +N + + K+ + IL V E+M+S G+ D ++ A + G
Sbjct: 245 EMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLL 304
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
+ F E KS + T Y L GK+G EAL ++M+E D Y
Sbjct: 305 REAKDFFAELKSCGYEP---GTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTY 361
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
L+ ++A K A + + +KG++ + ++ Y + G ++ L + SMK
Sbjct: 362 NELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKE 421
Query: 358 AKLKISDCISCAIV---------------------NGFSKRRGYWAAV------------ 384
A + C A++ NG R W +
Sbjct: 422 AGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKF 481
Query: 385 --KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
+V+ ++ S G P + T+ ++I+AY R A K++ EM + GF+ CV Y++++
Sbjct: 482 VNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLN 541
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ G R +++ MK+KG +P Y+ ++ + + N +E++ + + ++ P
Sbjct: 542 ALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFP 601
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ T++ A + R + + F+ +G D I M+ +F++ + ++ +L
Sbjct: 602 SWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGIL 661
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
Q + +G D Y+S M+ G +A+ + + E
Sbjct: 662 QSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLE 700
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/534 (20%), Positives = 204/534 (38%), Gaps = 89/534 (16%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV-------QSK 131
D + + + LH + + Y +A L E E L+ Y V +
Sbjct: 216 DVRAYTTILHAYSRTGK--------YEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGR 267
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA-------------------N 172
W I+ + E+ + + D TCS ++++C R + A N
Sbjct: 268 SWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYN 327
Query: 173 TLLQVFITDG----EIALL-------------AFNSAMGGYNKLHMYYSTILVYEKMKSA 215
LLQVF G +++L +N + Y + +V E M
Sbjct: 328 ALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQK 387
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
G++ ++ Y +++AY K G ++ LF K + P +T Y + LGK R+
Sbjct: 388 GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK--EAGCVP-NTCTYNAVLSMLGKKSRS 444
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
E +K DMK G + + + +++ + K +F+E + G D + L
Sbjct: 445 NEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 504
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ Y G + M A A++N +++ + + V + S+G
Sbjct: 505 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 564
Query: 396 IPGQVTYASIINAYCRIALY-----------------------------------SKAEK 420
P + +Y+ ++ Y + Y + +E+
Sbjct: 565 KPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSER 624
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
F ++ G+ +V ++SM++++ + A ++ + G P++ YNSLMDM+
Sbjct: 625 AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYV 684
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
R + E++ K +E+ ++ PD VSY TVI + R V+ +E G
Sbjct: 685 RRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERG 738
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 158/338 (46%), Gaps = 7/338 (2%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
H+ +IL LG+ + A K + + + D Y +++ +++ + + A LF+
Sbjct: 183 HVIEILVRILGRESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFER 242
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVE---KTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+E G P + V++ + + K L V+E M++ LK D +C+ V
Sbjct: 243 MKEMG--PSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKF-DEFTCSTVLSACA 299
Query: 377 RRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
R G K + +L S G PG VTY +++ + + +Y++A V EM++ V
Sbjct: 300 REGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSV 359
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+ +VA Y + G ++A ++ M KG PN Y +++D +G+A + KL+ M
Sbjct: 360 TYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 419
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ P+ +Y V+S + + +K + + NG +RA ++ +
Sbjct: 420 KEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMD 479
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ + ++ ++MKS G + D +++ ++A G ++ A
Sbjct: 480 KFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDA 517
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 118/290 (40%), Gaps = 71/290 (24%)
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+V S + LK+ + +V + Y A K+ +++ Q + Y +I++AY
Sbjct: 169 LVLSSNSGALKLDHHVIEILVRILGRESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAYS 228
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR--------------------- 449
R Y KA +F M++ G +V Y+ ++ ++GK GR
Sbjct: 229 RTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDE 288
Query: 450 ---------------IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+R+A A++K+ G EP YN+L+ + G+A + + KE
Sbjct: 289 FTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 348
Query: 495 ME-----------------------------------RRKVTPDKVSYTTVISAYNRARE 519
ME ++ V P+ ++YTTVI AY +A +
Sbjct: 349 MEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGK 408
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
D +K + + G V + ++ + K S+ E++K+L DMKS G
Sbjct: 409 EDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNG 458
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 98/530 (18%), Positives = 218/530 (41%), Gaps = 89/530 (16%)
Query: 82 KFDSFL----------HGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSK 131
KFD F G+L++ A D++ E K + P T L++ ++
Sbjct: 285 KFDEFTCSTVLSACAREGLLRE------AKDFFAELKSC-GYEPGTVTYNALLQVFGKAG 337
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFN 190
+ +S+ ++ + N D+ T + LVA+ RA K A ++++ G + + +
Sbjct: 338 VYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYT 397
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS- 249
+ + Y K + ++ MK AG V ++ Y ++ K S ++ + + KS
Sbjct: 398 TVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSN 457
Query: 250 -----------------------------RKLDSTPFSTH--MYKILCDSLGKSGRAFEA 278
R++ S F + L + G+ G +A
Sbjct: 458 GCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDA 517
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
K + +M G + Y +L+ + A + + E + + + KG + E L+L
Sbjct: 518 SKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG-FKPTETSYSLMLQ 576
Query: 339 ------------YIEEGLVE----------KTLDVVESMKNAKLKISD------------ 364
IEEG+ E +TL ++ + K L S+
Sbjct: 577 CYAKGGNYLGIERIEEGINEGQIFPSWMLLRTL-LLANFKCRALAGSERAFTLFKKHGYK 635
Query: 365 ---CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
I ++++ F++ Y A + + + G P VTY S+++ Y R KAE++
Sbjct: 636 PDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEI 695
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
+++ +V+Y++++ + + G +++A+ ++++M +G P ++ YN+ + +
Sbjct: 696 LKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTA 755
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
++E + + M + P+++++ V+ Y RA ++ + F ++ +
Sbjct: 756 MGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 805
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
WLV + + + + L+ + GR KL ++ + D +YTT++ AY
Sbjct: 168 WLVLSSNSGALKLDHHVIEILVRILGRESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAY 227
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ-IEELVKLLQDMKSEGTKLD 573
+R +++ + + + G +++ VF K+ + +++ +L++M+S+G K D
Sbjct: 228 SRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFD 287
Query: 574 ERLYHSAMNALRDAGLQMQAQ 594
E + ++A GL +A+
Sbjct: 288 EFTCSTVLSACAREGLLREAK 308
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/486 (20%), Positives = 199/486 (40%), Gaps = 40/486 (8%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAF--NSAMGGYNKLHMYYSTIL 207
PD ++ V +CV A A +L+ DG AF N + G + +
Sbjct: 158 PDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVE 217
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+++M ++ + Y +++ + K GD E +L + L + Y +L
Sbjct: 218 VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAIT---YNVLLS 274
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L ++GR E +M + ++ D Y+ L + + K LF ++ + G+
Sbjct: 275 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTI 334
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
C L+ ++G V +V++S+ NA L + I ++NG+ + A +
Sbjct: 335 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 394
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
Q+ S+ P +TY ++IN C+ + A+ + +EMQ G + V +++++ YG+T
Sbjct: 395 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 454
Query: 448 GRIRDAMWLVAKMKAKGCEPNV-----------------------------------WIY 472
G++ ++++M+ G +PNV +Y
Sbjct: 455 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 514
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N+++D + Q L ++M+ ++P V+Y +I + + N
Sbjct: 515 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN 574
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
+ + D ++ I++ + L Q M G K R YH ++ L AG ++
Sbjct: 575 HRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIE 634
Query: 593 AQWLQQ 598
++L Q
Sbjct: 635 MEYLYQ 640
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 183/424 (43%), Gaps = 38/424 (8%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+++M G+ D+ Y ++ Y IG ++V + E + L ++ Y L +
Sbjct: 260 VFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYT---YGSLLN 316
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L +GR EA F M KGI + +IY LI +A+ + +L E G+
Sbjct: 317 YLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSP 376
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D + + Y ++ ++++ + + MK L A+++ K AV +
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKF 436
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF------------DKC-- 433
Q++++G P + S++ C + + KA++ + EM +G + C
Sbjct: 437 NQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTK 496
Query: 434 ---------------------VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
V++Y++++ + GRI +A + M + G +P+ W Y
Sbjct: 497 GQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTY 556
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N+L+ + RA + +++EM R +TP V+Y+T++ R F + Y
Sbjct: 557 NTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMIT 616
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
+G + I I++ SK + ++E KL Q + S+ +L+ ++ + AL +G
Sbjct: 617 SGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNED 676
Query: 593 AQWL 596
A L
Sbjct: 677 AMHL 680
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 158/368 (42%), Gaps = 16/368 (4%)
Query: 222 GCYCQIMEAYYKIGDSEKVAALF-LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALK 280
GC+C ++G E A F L KS + + K LCD+ R EA+
Sbjct: 102 GCFC-------RMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDA----KRLCEAMD 150
Query: 281 FF-RDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE-AEEKGMLRDPEVCLKLVLM 338
+ M E G D Y +L+ F + + A EL A+ +G P V +++
Sbjct: 151 ILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVI 210
Query: 339 --YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+ EG V+K ++ M + ++ + +++G K + A V++Q+I +G
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P TY +I+ Y I + + ++ EM G Y S++ GR R+A +L
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFL 330
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
M KG +PNV IY L+ + L ++ L M ++PD + + +AY +
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
D + +N+ + G D G ++ KL ++++ V M +EG + +
Sbjct: 391 KAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450
Query: 577 YHSAMNAL 584
++S + L
Sbjct: 451 FNSLVYGL 458
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 101/482 (20%), Positives = 193/482 (40%), Gaps = 45/482 (9%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY-NKLHMYYST 205
V PD T S L+ R + + + + G + + N + G + + +
Sbjct: 90 VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
++ ++M G D Y +++ + +E+ L + S P + Y I+
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ G+ +A F +M ++GI + Y ++I V AE +F++ +KG+
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV------NGFSK--- 376
D + L+ Y+ G ++ + ++E M LK DC + + NG +
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLK-PDCYTYGSLLNYLCNNGRCREAR 328
Query: 377 -------RRGYWAAVKVYEQLI--------------------SQGCIPGQVTYASIINAY 409
R+G V +Y LI G P + I AY
Sbjct: 329 FLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ A+ +A +F +M+Q+G VV Y +++ K GR+ DA+ +M +G PN+
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV---ISAYNRAREFDMCVKF 526
+++NSL+ + ++ + EM + + PD V + T+ + + + +
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
GVI ++G + +I+E K L M S G K DE Y++ ++
Sbjct: 509 MERVGTRPGVISYT---TLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCR 565
Query: 587 AG 588
AG
Sbjct: 566 AG 567
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/461 (19%), Positives = 176/461 (38%), Gaps = 74/461 (16%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV------ASCVRAR- 166
+P+ T LI + KW +V + E+ + + PD +T L+ C AR
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329
Query: 167 ------------KFKIANTLLQVFITDGEIALL-----------------AFNSAMGGYN 197
I L+ + T G ++ + FN Y
Sbjct: 330 LFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
K M + ++ KMK G+ D Y +++A K+G + F + + + F
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
++ L L + +A +F+ +M +GI D + +++C+ + +V A+ L
Sbjct: 450 ---VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLI 506
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E G L+ + G +++ ++ M + LK + +++G+ +
Sbjct: 507 DLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRA 566
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG-------- 429
A V+ +++ G PG VTY++I++ +S+A+++++ M G
Sbjct: 567 GRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIY 626
Query: 430 ---------------------------FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
F + ++ M+ K+GR DAM L A + +
Sbjct: 627 NIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISS 686
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
G P+V+ Y + + L + + L+ ME+ TP+
Sbjct: 687 YGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPN 727
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/524 (20%), Positives = 229/524 (43%), Gaps = 10/524 (1%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQE---LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
+P+ ++ L G+ + ++QE L ++ P P+ + +I +
Sbjct: 159 IPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP---PDVVSYTTVINGFFKEGDL 215
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSA 192
D + +LP+ T S ++A+ +A+ A +L + +G + +NS
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY I +KM S G+ D Y +M+ K G + +F R L
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
P T Y L G E M GI + +++ LIC++A +V
Sbjct: 336 --KPEIT-TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A +F + ++G+ D ++ + + G VE + E M + +L + + ++++
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
+ A ++ +++ +G + + SII+++C+ ++EK+F M + G
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
++ YS+++ Y G++ +A L+A M + G +P+ YN+L++ + + + L+
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+EME V+PD ++Y ++ + R + Y +G ++ + I++ K
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ +E +++ Q++ +L+ R ++ + AL G +A+ L
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 97/505 (19%), Positives = 202/505 (40%), Gaps = 82/505 (16%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P+ + ++S +HG Q +E A + + P+ T L+ YL ++ +
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKE-AIGFLKKMHS-DGVEPDVVTYNSLMDYLCKNGRC--- 320
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA--NTLLQVFITDGEIALLAFNSAMG 194
+E K+++ + R K +I TLLQ + T G +
Sbjct: 321 ---TEARKMFDSMTK------------RGLKPEITTYGTLLQGYATKGALV--------- 356
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL-- 252
++H + + M GI + + ++ AY K G ++ +F + + + L
Sbjct: 357 ---EMHG------LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 407
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D+ + T + ILC KSGR +A+++F M ++ + +Y SLI S +
Sbjct: 408 DTVTYGT-VIGILC----KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A+EL E ++G +CL + +I++
Sbjct: 463 AKELILEMLDRG------ICLDTIFFN-----------------------------SIID 487
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
K + K+++ ++ G P +TY+++I+ YC +A K+ M G
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 547
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
V Y++++ Y K R+ DA+ L +M++ G P++ YN ++ + + ++L+
Sbjct: 548 DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 607
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+ + +Y ++ + D ++ + + ++ IM+G K+
Sbjct: 608 VGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 667
Query: 553 SQIEELVKLLQDMKSEGTKLDERLY 577
+ +E L + + G D R Y
Sbjct: 668 GRNDEAKDLFAALSANGLVPDVRTY 692
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 163/414 (39%), Gaps = 23/414 (5%)
Query: 72 HHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSK 131
H PD ++S + + K+ + E + + K+ +PE +T L++
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR--GLKPEITTYGTLLQGYATKG 353
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL----L 187
+ L + + P+ + S L+ C A++ K+ +L VF + L +
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILI--CAYAKQGKVDQAML-VFSKMRQQGLNPDTV 410
Query: 188 AFNSAMG-----GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ + +G G + M Y ++ E++ IV Y ++ + +K
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV-----YNSLIHSLCIFDKWDKAKE 465
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L LE R + T + + DS K GR E+ K F M G+ D Y++LI
Sbjct: 466 LILEMLDRGI---CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ ++ A +L GM D L+ Y + +E L + M+++ +
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
I+ G + R AA ++Y + G TY I++ C+ L +A ++F
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ ++ M+ K GR +A L A + A G P+V Y SLM
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY-SLM 695
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 4/214 (1%)
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC---VVAYSSMVA 442
V ++ GCIP +Y ++ C +A ++ M G D C VV+Y++++
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD-CPPDVVSYTTVIN 207
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ K G + A +M +G PNV Y+S++ +A+ + + ++ M + V P
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ +Y +++ Y + + + F + +G D ++ K + E K+
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M G K + Y + + G ++ L
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 23/276 (8%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIG---DSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+M GI LD+ + I++++ K G +SEK+ L + K D +ST L D
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI-GVKPDIITYST-----LID 522
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+G+ EA K M G+ D Y +LI + I+ ++ A LF+E E G+
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV-- 580
Query: 328 DPEVCLKLVLMYIEEGLVE-------KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
P++ + I +GL + K L V + +L++S I++G K
Sbjct: 581 SPDI---ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS--TYNIILHGLCKNNLT 635
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A+++++ L T+ +I A ++ +A+ +F + G V YS M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ G + + L M+ GC N + NS++
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/519 (21%), Positives = 222/519 (42%), Gaps = 46/519 (8%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
ELA+ Y E + TL +++ L + K + + + + + V PD T +
Sbjct: 207 ELAWRIYQEISR-SGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNT 265
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+++ + A L+ + G + +N+ + G K Y V+ +M +G
Sbjct: 266 LISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 325
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGR 274
+ DS Y ++ K GD+ + +F + +SR + D FS+ M +SG
Sbjct: 326 LSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMM-----SLFTRSGN 380
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLI---CSFASITE---------------------- 309
+AL +F +KE G++ D IY LI C I+E
Sbjct: 381 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNT 440
Query: 310 ----------VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
+ A++LF E E+G+ D L+ + + G ++ +++ + MK +
Sbjct: 441 ILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKR 500
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+K+ +++GF K A +++ ++S+ +P ++++ ++NA C S+A
Sbjct: 501 IKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAF 560
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
+V+ EM K V+ +SM+ Y ++G D + KM ++G P+ YN+L+
Sbjct: 561 RVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGF 620
Query: 480 GRAKNLRQVEKLWKEMERRK--VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ +N+ + L K+ME ++ + PD +Y +++ + R + + G
Sbjct: 621 VKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNP 680
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
DR+ ++ F + E + +M G D++
Sbjct: 681 DRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDDKF 719
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 183/401 (45%), Gaps = 12/401 (2%)
Query: 118 STLKLLIRYLVQSKK----WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
S LLIR VQ++K +++ L K Y V DA C+ L+ S VR ++A
Sbjct: 156 SVFDLLIRTFVQARKLREAYEAFTLLRS--KGYTVSIDA--CNALIGSLVRIGWVELAWR 211
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+ Q G + + N + K +++ G+ D Y ++ AY
Sbjct: 212 IYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYS 271
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
G E+ L S+ + Y + + L K G+ A + F +M G+
Sbjct: 272 SQGLMEEAFELMHAMPSKGFSP---GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 328
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
D + Y SL+ + E +F + + ++ D ++ ++ G ++K L
Sbjct: 329 DSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 388
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
S+K A L + I ++ G+ ++ A+ + +++ QGC VTY +I++ C+
Sbjct: 389 NSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 448
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+ +A+K+F EM ++G + ++ + K G +++AM L KMK K + +V Y
Sbjct: 449 KMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTY 508
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
N+L+D G+ ++ +++W +M +++ P +S++ +++A
Sbjct: 509 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNA 549
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 144/324 (44%)
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L SL + G A + ++++ G+ + ++ + +++ E +EKG
Sbjct: 196 LIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKG 255
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ D L+ Y +GL+E+ +++ +M + ++NG K Y A
Sbjct: 256 VYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAK 315
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+V+ +++ G P TY S++ C+ + E +F +M+ + +V +SSM++++
Sbjct: 316 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLF 375
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
++G + A+ +K G P+ IY L+ + R + + L EM ++ D
Sbjct: 376 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDV 435
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
V+Y T++ + + K +NE G D I++ KL ++ ++L +
Sbjct: 436 VTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKK 495
Query: 565 MKSEGTKLDERLYHSAMNALRDAG 588
MK + KLD Y++ ++ G
Sbjct: 496 MKEKRIKLDVVTYNTLLDGFGKVG 519
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 111/267 (41%), Gaps = 6/267 (2%)
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN--AKLKISDCISCAIVNGFSKRRGYW 381
G L D + C VL I V + +++V S+ + + +D + ++ F + R
Sbjct: 117 GRLSDAQSC---VLRMIRRSGVSR-VEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLR 172
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A + + L S+G ++I + RI A +++ E+ + G V + MV
Sbjct: 173 EAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMV 232
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
K G++ +++++ KG P++ YN+L+ + + + +L M + +
Sbjct: 233 NALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFS 292
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P +Y TVI+ + +++ + + E +G D ++ K E +
Sbjct: 293 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENI 352
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAG 588
DM+S D + S M+ +G
Sbjct: 353 FSDMRSRDVVPDLVCFSSMMSLFTRSG 379
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG--------- 480
F ++ S+M+ + ++GR+ DA V +M + V I NSL+ +
Sbjct: 99 FKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVF 158
Query: 481 --------RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+A+ LR+ + + + + T + +I + R ++ + Y E
Sbjct: 159 DLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISR 218
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
+G ++ IMV K ++E++ L +++ +G D Y++ ++A GL +
Sbjct: 219 SGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEE 278
Query: 593 A 593
A
Sbjct: 279 A 279
>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
Length = 795
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/492 (21%), Positives = 194/492 (39%), Gaps = 40/492 (8%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A D ++EA + P T +LI+ D L +LP + + ++
Sbjct: 313 ALDLFDEAVR-DGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVI 371
Query: 160 ASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVL 219
+R ++++ A L + + G + + + +K H + + +++KMK AG+
Sbjct: 372 KGLLRNKQWEDAIALFDLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKP 431
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
++ Y + G ++ L+ E + P + Y L K +A
Sbjct: 432 SIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGF---PPNEVTYTTLMKGYIKKKAFDKAY 488
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
+M + G+ Y LI + V +E+ K +
Sbjct: 489 ALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKR-------------------F 529
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ EG V T+ +I+NGF K +A+ +Y Q+ +G P
Sbjct: 530 VSEGFVPTTM----------------TYNSIINGFVKAGMMGSALAMYRQMCEKGITPNI 573
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
VTY S I+ YCR A K+ I M+ G + AY++ + M+ K G + A+ +
Sbjct: 574 VTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVL 633
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
+ G PNV +YNS + + K + + K + M ++++ D YTT+I +++
Sbjct: 634 LLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGN 693
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
++ Y+E N + D + + I+ +LL DM + Y+
Sbjct: 694 VAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNM 753
Query: 580 AMNA-LRDAGLQ 590
+NA +RD LQ
Sbjct: 754 LINAHIRDGKLQ 765
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 163/370 (44%), Gaps = 10/370 (2%)
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
+M+ Y G+ K LF E + T + Y +L G E K R M
Sbjct: 300 LMQGYCLHGEIGKALDLFDEAVRDGVTPTNVT---YTVLIKGCDAEGMTDETYKLCRQMI 356
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGL 344
E+G+L + +I + + A LF + G+ P+V L++ +
Sbjct: 357 EQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV---PDVFTYGCLIHWLSKHHK 413
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V + +++ + MK A +K S +++ G+ ++ A+K+Y ++ +G P +VTY +
Sbjct: 414 VHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTT 473
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
++ Y + + KA + EM Q G Y+ ++ R+ + ++ + ++G
Sbjct: 474 LMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEG 533
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
P YNS+++ +A + ++++M + +TP+ V+YT+ I Y R D+ V
Sbjct: 534 FVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAV 593
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
K R NG D A + +F K + + L + +G + +Y+S +
Sbjct: 594 KLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGY 653
Query: 585 RDAGLQMQAQ 594
++ L+M A+
Sbjct: 654 KN--LKMMAE 661
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/426 (19%), Positives = 160/426 (37%), Gaps = 34/426 (7%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P L+I+ L+++K+W+ ++L D + +PD T L+ + K A L
Sbjct: 362 PSTYEFNLVIKGLLRNKQWEDAIALF-DLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNL 420
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G + +++ +S + GY + + +Y +M G + Y +M+ Y K
Sbjct: 421 WDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIK 480
Query: 234 IGDSEKVAALFLECKSRKLDSTPFS--------------------------------THM 261
+K AL E + ++ T
Sbjct: 481 KKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMT 540
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y + + K+G AL +R M EKGI + Y S I + LA +L
Sbjct: 541 YNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMR 600
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
G+ D + M+ ++G + L + + L + + + V G+ +
Sbjct: 601 CNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMA 660
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A K Y +I Q Y ++I+ + ++ + A +++ EM ++++
Sbjct: 661 EASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALT 720
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
++G I A L+ M PN YN L++ H R L++ +L +M V
Sbjct: 721 HGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVV 780
Query: 502 PDKVSY 507
PD +Y
Sbjct: 781 PDDTTY 786
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 116/280 (41%), Gaps = 39/280 (13%)
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
A K+ D + A V G R + AV++++++ G P + YA I C++ +
Sbjct: 186 ADAKMYDVVMRACVVG----RMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADR 241
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK-AKGCEPNVWIYNSLM 476
A +V +M++ G Y+S+V + K GR+ +A+ L +M A G + +V++ +LM
Sbjct: 242 AVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLM 301
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA----------YNRAR-------- 518
+ + + L+ E R VTP V+YT +I Y R
Sbjct: 302 QGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLL 361
Query: 519 ----EFDMCVK--FYN----------EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
EF++ +K N + ++ GV D G ++ SK ++ E V L
Sbjct: 362 PSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLW 421
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
MK G K HS + + G +A L G
Sbjct: 422 DKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPG 461
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/185 (18%), Positives = 82/185 (44%), Gaps = 3/185 (1%)
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
Y +++++G +P + ++ A R A + A +F EM+ KG+ Y +V
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMY-DVVMRACV 199
Query: 447 TGRIR-DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
GR+ DA+ L +M G +P+ +Y + + ++ + ++ +M + P
Sbjct: 200 VGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDF 259
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRM-NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+Y +V+ + D ++ ++ + G +D +A ++ + +I + + L +
Sbjct: 260 TYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDE 319
Query: 565 MKSEG 569
+G
Sbjct: 320 AVRDG 324
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 187/392 (47%), Gaps = 4/392 (1%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
L+ LV+ K + +++SLS+ ++ + D + L+ R ++ A ++L I G
Sbjct: 90 LLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLG 149
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
E + F+S + G + + +++M ++G + Y I++ + KIG +
Sbjct: 150 FEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKT--TV 207
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
A+ L K K P +Y + D L K EAL F ++K KG+ D Y+ L+
Sbjct: 208 AVGLLKKMDKAGGRP-DIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILM 266
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + + A LF E ++ D LV +EG++ + +++ M ++
Sbjct: 267 HGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVE 326
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ +++NG+ + + A V++ +I++GC+P V+Y +IN YC+ +A ++
Sbjct: 327 PNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEAREL 386
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F EM +G Y+++++ + GR +A L M+A+GC P++ L+D +
Sbjct: 387 FDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCK 446
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
L +L++ M+ + P+ V+Y +I A
Sbjct: 447 LGYLDNALRLFRAMQDSCLKPNLVTYDILIRA 478
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 149/322 (46%), Gaps = 5/322 (1%)
Query: 272 SGRAFE-----ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+G FE A++FF +M G + Y ++I F I + +A L K+ ++ G
Sbjct: 162 NGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGR 221
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D + ++ ++ LV + LD+ +K ++ +++G A +
Sbjct: 222 PDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASAL 281
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ +++S +P VT+ +++ C+ + S+A+ + M +KG + Y+S++ Y
Sbjct: 282 FNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCL 341
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
++ +A + M KGC PNV YN L++ + +A+ + + +L+ EM R + P+ +
Sbjct: 342 QNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFN 401
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y T+IS +A + + + + G D I++ KL ++ ++L + M+
Sbjct: 402 YNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQ 461
Query: 567 SEGTKLDERLYHSAMNALRDAG 588
K + Y + A+ +G
Sbjct: 462 DSCLKPNLVTYDILIRAMYKSG 483
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 131/312 (41%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ IL + + R A + + G D ++SLI + A E F E
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
G + ++ + + G + +++ M A + I I++G K R
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+ ++ ++ +G P TY+ +++ C +A +F EM VV ++ +V
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
K G + +A ++ M KG EPN YNSLM+ + + + ++ M +
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ VSY +I+ Y +A+ D + ++E G + + ++ + + E +L
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAREL 421
Query: 562 LQDMKSEGTKLD 573
+DM+++G D
Sbjct: 422 FKDMQAQGCSPD 433
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 105/214 (49%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++N FS+ + A V ++I G P VT++S+IN C +++A + F EM G
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ + Y++++ + K G+ A+ L+ KM G P++ IYN+++D + + + +
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
++ E++ + V PD +Y+ ++ + + + +NE + D I+V
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKL 304
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
K + E +++ M +G + + Y+S MN
Sbjct: 305 CKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNG 338
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 157/360 (43%), Gaps = 11/360 (3%)
Query: 95 QTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHT 154
Q + A+ + KL F P+ T LI L K+ + ++ P+ HT
Sbjct: 133 QRVDFAFSVLGKIIKLG-FEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHT 191
Query: 155 CSRLVASCVRARKFKIANTLLQVFI-TDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMK 213
+ ++ + K +A LL+ G ++ +N+ + G K + + ++ ++K
Sbjct: 192 YNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIK 251
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
G+ D Y +M E+ +ALF E S L+ P + IL D L K G
Sbjct: 252 GKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMS--LNIMP-DVVTFNILVDKLCKEG 308
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
EA + M EKG+ + + Y SL+ + +V A +F KG + P V
Sbjct: 309 MLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM--PNVVS 366
Query: 334 KLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
+L+ Y + +++ ++ + M L + +++G + + A ++++ +
Sbjct: 367 YNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQ 426
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRI 450
+QGC P VT ++++ C++ A ++F MQ +V Y ++ AMY K+G+I
Sbjct: 427 AQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMY-KSGKI 485
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%)
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+IN + R+ A V ++ + GF+ V +SS++ + AM +M A G
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+PN+ YN+++ + L K+M++ PD V Y T+I + R +
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++E + G D I++ Q EE L +M S D ++ ++ L
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKL 304
Query: 585 RDAGLQMQAQWL 596
G+ +AQ +
Sbjct: 305 CKEGMLSEAQGI 316
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 159/359 (44%), Gaps = 38/359 (10%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+T Y IL +L +GR +A + F +M D Y ++ + +++E++ A +L
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLL 308
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E +G+ +P ++ + +EG V + VVE M + + + +++GF ++
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
AA ++++ +G VTY ++IN CR +AE+V EM+ KG D V Y
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 438 SSMVAMYGKTGRIRDAMW-----------------------------------LVAKMKA 462
+ ++ Y K G++ +A L+ +M +
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
KG E N++ YNSL++ +A NL Q + +M+ + PD +YTT+I A +++E D
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
E G +++ F ++E +LL+ M + + Y+S M
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 208/477 (43%), Gaps = 9/477 (1%)
Query: 105 NEAKKLPEFRPEKSTL--KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASC 162
+EA +L + PEK+T +L++ L + + I + F PD T +V
Sbjct: 239 DEAVQLFQELPEKNTCSYNILLKALCTAGR---IKDAHQLFDEMASPPDVVTYGIMVHGY 295
Query: 163 VRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
+ + A LL G E+ +A+ S + + V E M G+VLD+
Sbjct: 296 CTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDA 355
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
+ +M + + GD F E + R L + + Y L + L ++G EA +
Sbjct: 356 AVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT---YTALINGLCRAGELKEAERV 412
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
++M++KG+ D Y LI + + ++ A + + +K + + L +
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
+G V +++ M + L+++ +++NG K A++ + G P T
Sbjct: 473 QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYT 532
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y +II A C+ +A + EM KG +V Y+ ++ + +GR+ L+ M
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
K PN YNSLM + KN++ +++K M ++V P++ +Y +I + +AR
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ F++E G + + ++ + +K + E +L + M+ + + +Y+
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYN 709
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 149/348 (42%), Gaps = 8/348 (2%)
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVY 209
D T + L+ RA + K A +LQ G ++ + + + GY K+ LV+
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
KM + + Y + + K GD L E S+ L+ F+ Y L + L
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT---YNSLINGL 505
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
K+G +A++ DM E G+ D Y ++I + E+ A L +E +KG+ P
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI--KP 563
Query: 330 EVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ VLM + G VE ++E M + + +++ + + + ++Y
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIY 623
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ ++SQ +P + TY +I +C+ +A EM +KGF +Y++++ + K
Sbjct: 624 KGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKK 683
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+ +A L KM+ +YN +D+ NL L E+
Sbjct: 684 KKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 38/246 (15%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A ++++++ S P VTY +++ YC ++ A K+ EM +G + VAY+S++A
Sbjct: 272 AHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIA 328
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ G++ DA+ +V M G + ++ ++M R +L + EM++R +
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE--LV- 559
D V+YT +I+ RA E + E G +D +++ + K+ ++ E LV
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 560 --------------------------------KLLQDMKSEGTKLDERLYHSAMNALRDA 587
+LL +M S+G +L+ Y+S +N L A
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKA 508
Query: 588 GLQMQA 593
G QA
Sbjct: 509 GNLEQA 514
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
CR+ L +A ++F E+ +K +Y+ ++ GRI+DA L +M + P+V
Sbjct: 234 CRLPL-DEAVQLFQELPEKN----TCSYNILLKALCTAGRIKDAHQLFDEMASP---PDV 285
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
Y ++ + L KL EM R + + V+YT+VI+ + V+ +
Sbjct: 286 VTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVED 345
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
M+G V+D A+ ++ F + + +M+ G D Y + +N L AG
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405
Query: 590 QMQAQWLQQNFE 601
+A+ + Q E
Sbjct: 406 LKEAERVLQEME 417
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 144/332 (43%), Gaps = 10/332 (3%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI-----CSFASITEVKLAEEL 316
Y L + L GR EA+ +M +KGI +P++Y I C +E A EL
Sbjct: 275 YSTLINGLCSEGRLEEAMDMLEEMVQKGI--EPTVYTYTIPLVSLCDAGCSSE---AVEL 329
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ +++G + + + L+ +G E + + M L + A++N
Sbjct: 330 LGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCV 389
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A +++ ++S G +P TY II +C + KA +F +M + G V+
Sbjct: 390 EGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVIT 449
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++++ Y K G + +AM L+ MK G +P+ W Y L+ R L L+ M
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMM 509
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
++P+ V+YT +I Y + D + + + +G + +M+ FSK + I
Sbjct: 510 EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSIS 569
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E M +G + Y S ++ L G
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFIDGLCRNG 601
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/514 (21%), Positives = 218/514 (42%), Gaps = 8/514 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P++ + + ++G+ + + +E A D E + P T + + L + V
Sbjct: 270 PNSVTYSTLINGLCSEGRLEE-AMDMLEEMVQ-KGIEPTVYTYTIPLVSLCDAGCSSEAV 327
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGY 196
L K +P+ T + L++ R KF+IA L + DG + + +N+ +
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + +++ M S G + + Y +I++ + +GD +K +F K K S+P
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD--KMLKAGSSP 445
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y L K G A++ MK G+ D Y LI F+ +++ A L
Sbjct: 446 -NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F E G+ + ++ Y V+ L + M + S +++GFSK
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A +++ QG +P +TY S I+ CR A K+F EM+++ + +
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624
Query: 437 YSSMVAMYGKTGRIRDA-MW-LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
YSS++ + GR DA M+ L+A++ GCEPNV Y +L+ + ++L
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M+++ + P + Y ++ + + + + + G + + ++ K +
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
IEE + Q M + DE ++ ++ L G
Sbjct: 745 IEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEG 778
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/418 (19%), Positives = 169/418 (40%), Gaps = 6/418 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKK-WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
RP T +I L + + ++ + +S F+ Y+ P+A T + L+ R +A
Sbjct: 199 RPSLLTFNTMINILCKKGRVQEAKLIMSHIFR-YDAYPNAFTYTSLILGHCRNHNLDLAF 257
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + DG + + +++ + G + + E+M GI Y + +
Sbjct: 258 AMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSL 317
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
G S + L + K R P + + L L + G+ A+ + M G++
Sbjct: 318 CDAGCSSEAVELLGKMKKR--GCVP-NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLV 374
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
Y +LI + A +FK G L + +++ + G ++K + +
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVI 434
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+ M A + ++ G+ K+ A+++ E + G P TY +I+ + R
Sbjct: 435 FDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
A +F M + G V Y++++ Y ++ DA+ L KM G P+
Sbjct: 495 GGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQT 554
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
YN ++ + ++ + E +M ++ + P+ ++YT+ I R + K ++E
Sbjct: 555 YNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHE 612
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/475 (17%), Positives = 189/475 (39%), Gaps = 12/475 (2%)
Query: 57 NASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE-FRP 115
+A + +EL + VP+ + F + + G+ +D + E+A Y+ K L + P
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKF-EIAIGLYH--KMLADGLVP 375
Query: 116 EKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL 175
T LI L ++++ ++ + + LP T + ++ + A +
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435
Query: 176 QVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
+ G ++ +N+ + GY K + + + E MK G+ D+ Y +++ + +
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
G E +LF + + Y + D + +AL F M E G L
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVT---YTAIIDGYFNLAKVDDALALFWKMVESGNLPSS 552
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
Y +I F+ + AE + ++G+L + + G +
Sbjct: 553 QTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHE 612
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE---QLISQGCIPGQVTYASIINAYCR 411
M+ + +++ G + G ++Y +L GC P TY +++ C
Sbjct: 613 MEKRNYFPNLYTYSSLIYGLCQE-GRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCG 671
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+A+++ + MQ+KG Y +++ K ++ A+ + M G + ++
Sbjct: 672 EGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSD 731
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
Y +L+ + + + + +++ M + D+V +T ++ + E D+C+K
Sbjct: 732 YKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKL 786
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 91/211 (43%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++ G + A ++++++ GC P VTY+++IN C +A + EM QK
Sbjct: 242 SLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQK 301
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G + V Y+ + G +A+ L+ KMK +GC PN+ + +L+ R
Sbjct: 302 GIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIA 361
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
L+ +M + P V+Y +I+ F+ + +G + ++
Sbjct: 362 IGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKC 421
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
F + I++ + + M G+ + Y++
Sbjct: 422 FCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/202 (18%), Positives = 88/202 (43%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A +Y ++++ G P +T+ ++IN C+ +A+ + + + Y+S++
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ + + A + +M GC+PN Y++L++ L + + +EM ++ + P
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+YT + + A V+ + + G V + ++ S+ + E + L
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLY 365
Query: 563 QDMKSEGTKLDERLYHSAMNAL 584
M ++G Y++ +N L
Sbjct: 366 HKMLADGLVPTTVTYNALINQL 387
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 76/176 (43%), Gaps = 35/176 (19%)
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A ++I+M G ++ +++M+ + K GR+++A +++ + PN + Y SL+
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
H R NL ++ M + P+ V+Y+T+I+ +C +
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLING--------LCSE------------ 285
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
++EE + +L++M +G + Y + +L DAG +A
Sbjct: 286 ---------------GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEA 326
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 176/371 (47%), Gaps = 8/371 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ + + AG + Y ++ AY + G + +F K K P + Y + D
Sbjct: 222 VFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMK--KAGCKP-NLITYNTIID 278
Query: 268 SLGKSGRAF-EALKFFRDMKEKGILEDPSIYASLI--CSFASITEVKLAEELFKEAEEKG 324
+ GK G +AL F +M+++G+ D + SLI CS + E ++ +F E + +G
Sbjct: 279 ACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWED--SQRVFAEMQRRG 336
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ +D L+ + G +E ++ +M+ + + +++G+ K + A+
Sbjct: 337 IEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAI 396
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+Y + G P +V+Y ++I+ Y ++ + A +M++ G VV Y++++ Y
Sbjct: 397 SLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAY 456
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
GK G+ +DA L KMK +G PNV Y++L+D + +A + V ++ E +R + PD
Sbjct: 457 GKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDV 516
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
V Y+++I + + + V E G + ++ + + Q ++L + +
Sbjct: 517 VLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKAN 576
Query: 565 MKSEGTKLDER 575
M + K+ ER
Sbjct: 577 MPNSVQKIGER 587
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 161/328 (49%), Gaps = 3/328 (0%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--CSFASITEVKLAEE 315
+ + Y + + G+SGR EALK F+ MK+ G + Y ++I C + ++K A +
Sbjct: 234 NVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGV-DLKQALD 292
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F E +++G+ D L+ + GL E + V M+ ++ +++
Sbjct: 293 IFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVC 352
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A + + + P VTY+++I+ Y ++ + +A ++ +M++ G V
Sbjct: 353 KGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRV 412
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+Y++++ +Y K GR DA+ M+ G + +V YN+L+D +G+ + L+ +M
Sbjct: 413 SYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKM 472
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + P+ ++Y+ +I +Y++A + EF+ G D + ++ K +
Sbjct: 473 KGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLV 532
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNA 583
E+ V LLQ+M G + + Y+S ++A
Sbjct: 533 EDAVVLLQEMTQAGIQPNIVTYNSLIDA 560
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 164/352 (46%), Gaps = 7/352 (1%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL--EDPSIYAS 299
AL LE S +L + L LG G AL+ + M ++ L E + +
Sbjct: 150 ALLLEKWSHQL----VGLEDFPYLLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASI 205
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
+I + + +V++A ++F A++ G + +V Y G + L V ++MK A
Sbjct: 206 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAG 265
Query: 360 LKISDCISCAIVNGFSKRR-GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
K + I++ K A+ +++++ +G P ++T+ S+I R L+ +
Sbjct: 266 CKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDS 325
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
++VF EMQ++G ++ + +++++ K G++ A ++ M+ K PNV Y++++D
Sbjct: 326 QRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDG 385
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+G+ + L+ +M+ V PD+VSY T+I Y + FD + + G D
Sbjct: 386 YGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKAD 445
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
++ + K + ++ L MK EG + Y + +++ AG+
Sbjct: 446 VVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMH 497
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/480 (20%), Positives = 184/480 (38%), Gaps = 90/480 (18%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ +++ + K + A D ++E +K P++ T LI + W+
Sbjct: 268 PNLITYNTIIDACGKGGVDLKQALDIFDEMQK-EGVEPDRITFNSLIAVCSRGGLWEDSQ 326
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ + + + D T + L+ + + + ++A +++ ++ +++ + GY
Sbjct: 327 RVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGY 386
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
KL + I +Y MK +G+ D Y +++ Y K+G + + CK +
Sbjct: 387 GKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDA---LIACKDMERVGLK 443
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y L D+ GK G+ +A F MK +G++ + Y++LI S++ + +
Sbjct: 444 ADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNV 503
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F E + G+ P+V L L I C C +V
Sbjct: 504 FTEFKRAGL--KPDVVLYSSL------------------------IDSCCKCGLVE---- 533
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE----------------- 419
AV + +++ G P VTY S+I+AY R K E
Sbjct: 534 -----DAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERS 588
Query: 420 ------------------------KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
VF EMQQ G VV +S+++ + +++A
Sbjct: 589 MEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCASLQEASV 648
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L+ +M+ + W+Y HG LR E++W E +R ++ Y T + YN
Sbjct: 649 LLEQMRFF----DGWVYGI---AHGLLMGLR--EQVWVEAQRLFDEISRMDYATGAAFYN 699
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 188/401 (46%), Gaps = 13/401 (3%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+++ M GY + ++V++++K G Y ++ Y KIG KV+ K
Sbjct: 411 YHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIG---KVSKALEVSK 467
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
++ + Y +L + + A F D+ + G+ D +Y ++I +F +
Sbjct: 468 MMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMG 527
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ A KE +++ + ++ + G + + L++ + M+ S CI
Sbjct: 528 NMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMR-----WSGCIPT 582
Query: 369 -----AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
A++ G ++ AV++ +++ G P + TY +I++ Y + KA + F
Sbjct: 583 VHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFT 642
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+++ +G + V Y +++ K+GR++ A+ + +M ++ N ++YN L+D R
Sbjct: 643 KLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRG 702
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
++ + +L ++M++ V PD +YT+ I+A +A + K E + G +
Sbjct: 703 DVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYT 762
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ +++ S E+ +K Q+MKS G K D+ +YH M +L
Sbjct: 763 TLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSL 803
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 173/376 (46%), Gaps = 4/376 (1%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+++++ + Y K+ + V + M+ AGI + Y ++ + ++ D A+F
Sbjct: 442 SVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVF 501
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ L +Y + + G A++ ++M+++ + +I F
Sbjct: 502 EDVVKDGLKP---DVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGF 558
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
A +++ A E+F G + L+L +E+ +EK +++++ M A + ++
Sbjct: 559 ARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNE 618
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
I++G++ A + + +L ++G TY +++ A C+ A V E
Sbjct: 619 HTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTRE 678
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M + + Y+ ++ + + G + +A L+ +MK +G +P++ Y S ++ +A +
Sbjct: 679 MSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGD 738
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG- 543
+++ K +EME V P+ +YTT+I + RA + +K + E + G D+A+
Sbjct: 739 MQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHC 798
Query: 544 IMVGVFSKLSQIEELV 559
+M + S+ S EE +
Sbjct: 799 LMTSLLSRASVAEEYI 814
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 206/439 (46%), Gaps = 4/439 (0%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYS 204
+ +LPDA++ + L+ A A L G E ++ +N G+ L +
Sbjct: 310 HGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLING 369
Query: 205 TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKI 264
+ +KM G + Y ++ + +IG+ E+ L+ E S + S+ +
Sbjct: 370 AWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISS---TV 426
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L SL KS + A K F +M+ G+ D Y++LI EV+ A L+++
Sbjct: 427 LLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNR 486
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
++ + + +++ E+G + + + + + L + + +++G+ KR AV
Sbjct: 487 IIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAV 546
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
K+Y+QL +G P VT+ S++ +C S+A ++ ++ G + V Y++++ +Y
Sbjct: 547 KLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVY 606
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ G ++ + L+++MKAK P Y ++ + L++ +L ++M+ +TPD+
Sbjct: 607 CEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQ 666
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
VSY T+I A+ +AR+ + Y++ ++ I++ F +++ LL
Sbjct: 667 VSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVS 726
Query: 565 MKSEGTKLDERLYHSAMNA 583
+++ L++ Y + + A
Sbjct: 727 LQNRKVNLNKYAYTTIIKA 745
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 174/434 (40%), Gaps = 43/434 (9%)
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+ S ++R+ +A L +G L+ +++ + G K IL+YEKM S
Sbjct: 427 LLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNR 486
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGR 274
I+ +S + I+ + G + F L + LD +Y I+ D K G
Sbjct: 487 IIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDII-----LYNIMIDGYIKRGN 541
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
EA+K ++ + EKGI + SL+ F ++ A L + G+ +
Sbjct: 542 TREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTT 601
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
L+ +Y EEG ++ L+++ MK + + ++ G K+ + ++ E + + G
Sbjct: 602 LMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVG 661
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
P QV+Y +II A+C K +R A
Sbjct: 662 LTPDQVSYNTIIQAFC-----------------------------------KARDMRKAF 686
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L KM EP YN L++ +L+ + L ++ RKV +K +YTT+I A+
Sbjct: 687 QLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAH 746
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ D V ++ + G + ++G K + E M S+G D+
Sbjct: 747 CAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQ 806
Query: 575 RLYHSAMNALRDAG 588
L+ +NA G
Sbjct: 807 DLFEVLLNAFHQCG 820
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 190/437 (43%), Gaps = 31/437 (7%)
Query: 156 SRLVASCVRARKFKIANTLL---QVFITDG--------EIALLAFNS----------AMG 194
SRLV S V ARK ++ L Q+ + +G E+ L +F S
Sbjct: 128 SRLVVSHVLARKKRLNELRLVLDQMLLHEGSGSAPSLCELLLGSFRSWDSSNVVWDMLAC 187
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
Y++ M + + V KMK ++ Y ++ Y + S + ++ E K +
Sbjct: 188 AYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLL---YNLRHSNIMWDVYNEIK---VSG 241
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
TP S + I+ D L + R +A+ FF+D + K + +++ + + V +A+
Sbjct: 242 TPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAK 301
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
F + G+L D L+ G + + LD+ M+N L+ + GF
Sbjct: 302 SFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGF 361
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
A + ++++ +G P VTY +I +C+I +A K++ EM GF +
Sbjct: 362 RLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSI 421
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN--LRQVEKLW 492
++ + ++ K+ ++ A L +M+A G P++ Y++L +HG K ++Q L+
Sbjct: 422 ISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTL--IHGLCKQGEVQQAILLY 479
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
++M ++ P+ + + ++ + +++ + +D + IM+ + K
Sbjct: 480 EKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKR 539
Query: 553 SQIEELVKLLQDMKSEG 569
E VKL + + +G
Sbjct: 540 GNTREAVKLYKQLGEKG 556
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 92/205 (44%)
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
++ G +P +Y +I+ C +A + +M+ G + +V Y+ + + G
Sbjct: 307 MLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGL 366
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
I A ++ KM KG PN+ Y L+ H + N+ + KL+KEM +S T
Sbjct: 367 INGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTV 426
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
++ + ++R+ D+ K + E NG D ++ K ++++ + L + M S
Sbjct: 427 LLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNR 486
Query: 570 TKLDERLYHSAMNALRDAGLQMQAQ 594
+ ++ + + L + G QA+
Sbjct: 487 IIPNSLIHGAILMGLCEKGKISQAR 511
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 98/234 (41%), Gaps = 3/234 (1%)
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
Y +V L V+ MK+ +S +++ W VY ++ G
Sbjct: 189 YSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMW---DVYNEIKVSGTPQS 245
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+ T + +++ CR + + A F + + K F VV+++++++ Y K G + A
Sbjct: 246 EYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFC 305
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
M G P+ + YN L+ A ++ + L +ME + PD V+Y + +
Sbjct: 306 MMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLG 365
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ + + G + +++ ++ +EE +KL ++M S G +L
Sbjct: 366 LINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQL 419
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 72/402 (17%), Positives = 150/402 (37%), Gaps = 67/402 (16%)
Query: 78 PDAKKFDSFLHGMLKDPQTQE--LAYDYYNEAKKLPEFRPEKSTL------------KLL 123
PD + + +HG+ K + Q+ L Y+ + +P + L ++
Sbjct: 454 PDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMY 513
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE 183
YL+ S +LS D +YN++ D + V+ K Q+
Sbjct: 514 FDYLITS-------NLSLDIILYNIMIDGYIKRGNTREAVKLYK--------QLGEKGIS 558
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ FNS M G+ + + +K G+ ++ Y +M Y + G+ + + L
Sbjct: 559 PTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLEL 618
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E K++ + T + Y ++ L K + E+ + DM G+ D Y ++I +
Sbjct: 619 LSEMKAKAIGPTHIT---YTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQA 675
Query: 304 FASITEVKLAEELFKEAEEK-------------------GMLRDPEVCL----------- 333
F +++ A +L+ + G L+D + L
Sbjct: 676 FCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLN 735
Query: 334 -----KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
++ + +G V+K + M ++S A++ KR A +
Sbjct: 736 KYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFC 795
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++S G P Q + ++NA+ + + ++ EM + G+
Sbjct: 796 MMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGW 837
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/500 (20%), Positives = 211/500 (42%), Gaps = 56/500 (11%)
Query: 112 EFRPEKSTLKLLIRYLVQS----KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARK 167
E P L LI L +S + WD + L K+ V+ +A +C+ L+ + RAR+
Sbjct: 265 EVFPNSIWLTQLISRLCRSGRTDRAWDVLHGL---MKLGGVM-EAASCNALLTALGRARE 320
Query: 168 FKIANTLL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKM---KSAGIVLDSGC 223
FK NTLL ++ D + ++ F + K + V+EKM +S G +++
Sbjct: 321 FKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDV 380
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y L D L K GR E L
Sbjct: 381 IT------------------------------------YNTLIDGLCKVGRQEEGLGLVE 404
Query: 284 DMKEKG-ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
M+ + + + Y LI + + ++ A ELF + + G+ + LV +
Sbjct: 405 RMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKH 464
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
G + ++ M+ LK + A++ F A++++++++ GC P + Y
Sbjct: 465 GRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVY 524
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
++I+ + +A V +M++ GF +V+++ ++ + + ++ +A ++ +M+
Sbjct: 525 YTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMEN 584
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
G +P+ YN+L+ + + +L K+M + + P V+Y +I AY D
Sbjct: 585 AGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDE 644
Query: 523 CVKFYNEFRMNGGVI-DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+K + + V + I I++ + +Q++ + L+ DMK +G K + +++
Sbjct: 645 AMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMF 704
Query: 582 NALRDAGLQMQAQWLQQNFE 601
L+ + WL + FE
Sbjct: 705 KGLQ------EKNWLSKAFE 718
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 161/358 (44%), Gaps = 24/358 (6%)
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
C SR+L TH+ IL D L + GR +AL +M + P+ I F++
Sbjct: 186 CPSRRL------THIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIV-FSA 238
Query: 307 ITEVKLAEELFKEAEEKGMLR---DPEV------CLKLVLMYIEEGLVEKTLDVVESMKN 357
+++ E E G++ + EV +L+ G ++ DV+ +
Sbjct: 239 LSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMK 298
Query: 358 AKLKISDCISC-AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ + SC A++ + R + + ++ P VT+ +IN C+
Sbjct: 299 LG-GVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVD 357
Query: 417 KAEKVFIEM---QQKGF--DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG-CEPNVW 470
+A +VF +M + GF + V+ Y++++ K GR + + LV +M+++ C PN
Sbjct: 358 EALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTV 417
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YN L+D + +A + +L+ +M + V P+ V+ T++ + + V+F+NE
Sbjct: 418 TYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEM 477
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ G + ++ F ++ IE+ ++L +M G D +Y++ ++ L AG
Sbjct: 478 QGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAG 535
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 159/359 (44%), Gaps = 38/359 (10%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+T Y IL +L +GR +A + F +M D Y ++ + +++E++ A +L
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLL 308
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E +G+ +P ++ + +EG V + VVE M + + + +++GF ++
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
AA ++++ +G VTY ++IN CR +AE+V EM+ KG D V Y
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 438 SSMVAMYGKTGRIRDAMW-----------------------------------LVAKMKA 462
+ ++ Y K G++ +A L+ +M +
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
KG E N++ YNSL++ +A NL Q + +M+ + PD +YTT+I A +++E D
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
E G +++ F ++E +LL+ M + + Y+S M
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 208/477 (43%), Gaps = 9/477 (1%)
Query: 105 NEAKKLPEFRPEKSTL--KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASC 162
+EA +L + PEK+T +L++ L + + I + F PD T +V
Sbjct: 239 DEAVQLFQELPEKNTCSYNILLKALCTAGR---IKDAHQLFDEMASPPDVVTYGIMVHGY 295
Query: 163 VRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
+ + A LL G E+ +A+ S + + V E M G+VLD+
Sbjct: 296 CTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDA 355
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
+ +M + + GD F E + R L + + Y L + L ++G EA +
Sbjct: 356 AVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT---YTALINGLCRAGELKEAERV 412
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
++M++KG+ D Y LI + + ++ A + + +K + + L +
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
+G V +++ M + L+++ +++NG K A++ + G P T
Sbjct: 473 QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYT 532
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y +II A C+ +A + EM KG +V Y+ ++ + +GR+ L+ M
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
K PN YNSLM + KN++ +++K M ++V P++ +Y +I + +AR
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ F++E G + + ++ + +K + E +L + M+ E + +Y+
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYN 709
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 150/348 (43%), Gaps = 8/348 (2%)
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVY 209
D T + L+ RA + K A +LQ G ++ + + + GY K+ LV+
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
KM + + Y + + K GD L E S+ L+ F+ Y L + L
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT---YNSLINGL 505
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
K+G +A++ DM E G+ D Y ++I + E+ A L +E +KG+ P
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI--KP 563
Query: 330 EVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ VLM + G VE ++E M + + +++ + + + ++Y
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIY 623
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ ++SQ +P + TY +I +C+ +A EM +KGF +Y++++ + K
Sbjct: 624 KGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKK 683
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+ +A L KM+ + +YN +D+ NL L E+
Sbjct: 684 KKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 38/246 (15%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A ++++++ S P VTY +++ YC ++ A K+ EM +G + VAY+S++A
Sbjct: 272 AHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIA 328
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ G++ DA+ +V M G + ++ ++M R +L + EM++R +
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE--LV- 559
D V+YT +I+ RA E + E G +D +++ + K+ ++ E LV
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 560 --------------------------------KLLQDMKSEGTKLDERLYHSAMNALRDA 587
+LL +M S+G +L+ Y+S +N L A
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKA 508
Query: 588 GLQMQA 593
G QA
Sbjct: 509 GNLEQA 514
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
CR+ L +A ++F E+ +K +Y+ ++ GRI+DA L +M + P+V
Sbjct: 234 CRLPL-DEAVQLFQELPEKN----TCSYNILLKALCTAGRIKDAHQLFDEMASP---PDV 285
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
Y ++ + L KL EM R + + V+YT+VI+ + V+ +
Sbjct: 286 VTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVED 345
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
M+G V+D A+ ++ F + + +M+ G D Y + +N L AG
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405
Query: 590 QMQAQWLQQNFE 601
+A+ + Q E
Sbjct: 406 LKEAERVLQEME 417
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 197/445 (44%), Gaps = 28/445 (6%)
Query: 175 LQVFITDGEI--ALLAFNS--AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
L+ + GEI AL+ F+S + GG N + IL+ +++ S G V D+
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILI-KRLCSDGRVSDA------ERV 209
Query: 231 YYKIGDSEKVA-----------ALFLECKSRKLDSTPFS--THMYKILCDSLGKSGRAFE 277
+ +G S V A +E R ++ PF T + L +L GR +
Sbjct: 210 FAALGPSATVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPD 269
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
AL F DM +G Y+ L+ + + + A L E KG +P++ VL
Sbjct: 270 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGC--EPDIVTYNVL 327
Query: 338 M--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ EG V++ L+++ ++ + K ++ + ++ ++ S C
Sbjct: 328 INAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P +VT+ +I+ + C+ L +A +V M + G +V YSS++ GR+ DA+
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L++++K+ GC+P+ Y +++ + + E+L EM PD+V++ TV+++
Sbjct: 448 LLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLC 507
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+ D ++ + NG D ++ S I++ ++LL D++S G K D
Sbjct: 508 QKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIV 567
Query: 576 LYHSAMNALRDAGLQMQAQWLQQNF 600
+++ + L A+ L N
Sbjct: 568 TFNTLLKGLCGVDRWEDAEQLMANM 592
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/442 (20%), Positives = 187/442 (42%), Gaps = 10/442 (2%)
Query: 150 PDAHTCSRLV-ASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILV 208
PD T + L+ A CVR R + +++ ++ + K Y + +
Sbjct: 249 PDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMAL 308
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR--KLDSTPFSTHMYKILC 266
++M++ G D Y ++ A GD ++ + S K D+ + T + K LC
Sbjct: 309 LDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTY-TPVLKSLC 367
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
S R E + +M D + +++ S V A E+ E G +
Sbjct: 368 ----GSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCV 423
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D ++ + G V+ ++++ +K+ K ++ G + A ++
Sbjct: 424 ADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEEL 483
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+++ C P +VT+ +++ + C+ L +A +V +M + G +V Y+ ++
Sbjct: 484 MAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCN 543
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
I DAM L++ +++ GC+P++ +N+L+ E+L M R PD+++
Sbjct: 544 ESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELT 603
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+ TVI++ + ++ NG V + + I+V K + + ++LL M
Sbjct: 604 FNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM- 662
Query: 567 SEGTKLDERLYHSAMNALRDAG 588
+ GT D Y++ ++ L AG
Sbjct: 663 TNGTP-DLITYNTVISNLTKAG 683
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/511 (19%), Positives = 210/511 (41%), Gaps = 31/511 (6%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEF--RPEKSTLKLLIRYLVQSKKWDS 135
PD ++ ++ M + E N LP +P+ T +++ L S++W
Sbjct: 319 PDIVTYNVLINAMCNEGDVDE----ALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKE 374
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMG 194
+ L + N PD T + +V S + A ++ G +A ++ ++S +
Sbjct: 375 VEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILD 434
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE--CKSRKL 252
G + + + ++KS G D+ Y +++ E+ L E C
Sbjct: 435 GLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPP 494
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D F+T + SL + G A++ M E G D Y +I + + +
Sbjct: 495 DEVTFNTVVA-----SLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDD 549
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL--VEKTLDVVESMKNAKLKISDCIS--- 367
A EL + + G P++ + + +GL V++ D + M N + S+C
Sbjct: 550 AMELLSDLQSCGC--KPDI---VTFNTLLKGLCGVDRWEDAEQLMAN--MMRSNCPPDEL 602
Query: 368 --CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++ ++ A++ + + GC+P TY+ +++A + A ++ M
Sbjct: 603 TFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM 662
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
D ++ Y+++++ K G++ +A+ L+ M + G P+ Y SL R
Sbjct: 663 TNGTPD--LITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGT 720
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ ++ + ++ ++PD Y V+ + R R D+ + + +G + D + I+
Sbjct: 721 DRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVIL 780
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ + ++E +LL + S G LD++L
Sbjct: 781 LEALAYGGLLDEAKRLLASLCSLGV-LDKKL 810
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 107/539 (19%), Positives = 208/539 (38%), Gaps = 28/539 (5%)
Query: 77 VPDA-KKFDSFLH----------GMLKDPQTQELAYDYYNEAKKLPEFR-----PEKSTL 120
+PDA FD LH +L D +E Y L E R P+ T
Sbjct: 267 IPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGY--RQAMALLDEMRAKGCEPDIVTY 324
Query: 121 KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
+LI + D +++ + + PDA T + ++ S + ++K LL +
Sbjct: 325 NVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTS 384
Query: 181 DG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
+ + FN+ + + + I V + M G V D Y I++ +G +
Sbjct: 385 NNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDD 444
Query: 240 VAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
L KS K D+ ++T + K LC S + RA E +M D +
Sbjct: 445 AVELLSRLKSYGCKPDTIAYTT-VLKGLC-STEQWERAEE---LMAEMLCSDCPPDEVTF 499
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
+++ S V A + ++ E G D ++ E ++ ++++ +++
Sbjct: 500 NTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQS 559
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
K ++ G + A ++ ++ C P ++T+ ++I + C+ L ++
Sbjct: 560 CGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQ 619
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A + M + G YS +V K G+ + A+ L++ M P++ YN+++
Sbjct: 620 AIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVIS 677
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+A + + L + M + PD +Y ++ R D V+ + G
Sbjct: 678 NLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSP 737
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
D ++ F + + + + M S G DE Y + AL GL +A+ L
Sbjct: 738 DTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRL 796
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 143/306 (46%), Gaps = 7/306 (2%)
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
+FR + K L+ S Y ++I A + A ELF+E + G + ++ +
Sbjct: 96 YFRAVTPKASLDVIS-YTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLL 154
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ G +E L E M + + +++G K + A KV+EQ++ +GC+P +
Sbjct: 155 KAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTI 214
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TY ++I+ + + + +A K+ M KG + V Y S+V + K I +A ++A+M
Sbjct: 215 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM 274
Query: 461 KAKGCEPNVWIYNSLMDMH---GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+ +GCEP ++I+ SL+ + GRA+ QV EM R PD + YT++I
Sbjct: 275 RERGCEPGLFIFTSLLSYYLSKGRAEEAYQV---LTEMTARGCAPDVILYTSLIDLLFST 331
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
++ G D G ++ FSK+ +E ++L+ M G D Y
Sbjct: 332 GRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAY 391
Query: 578 HSAMNA 583
+S M+
Sbjct: 392 NSLMDG 397
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 112/526 (21%), Positives = 209/526 (39%), Gaps = 79/526 (15%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + + + G+LK + ++ ++ E P ++T ++I L +++
Sbjct: 141 PNVVAYTAVIDGLLKAGRIEDGLKNF--EEMSGSSCVPTRTTYTVVIDGLCKAQMLPDAC 198
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ E +PD T + L+ +A K A LL V +T G E + + S + G+
Sbjct: 199 KVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGF 258
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
KL M V +M+ G + ++ Y G +E+ + E +R
Sbjct: 259 CKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAP-- 316
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+Y L D L +GR EA F M EKG D Y ++I +F+ I
Sbjct: 317 -DVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKI--------- 366
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFS 375
G VE +++E M + + DC + ++++G+
Sbjct: 367 --------------------------GNVEAAGEILELMAKSGVG-PDCFAYNSLMDGYV 399
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG-FDKCV 434
K A VY+++++ G P VT+ +++ + +A +F EM +K +
Sbjct: 400 KLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTL 459
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V+Y+ ++ GK GR+ +A +M +G P Y SL+ +A + + +KL ++
Sbjct: 460 VSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVED 519
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M + V PD +Y+ +I+ G+ID ++ VF
Sbjct: 520 MVKLGVNPDVQAYSALIT----------------------GLIDSSMVDTAWDVF----- 552
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
Q+M G +E Y R AG + + ++Q+F
Sbjct: 553 --------QEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHF 590
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 111/535 (20%), Positives = 210/535 (39%), Gaps = 78/535 (14%)
Query: 135 SIVSLSEDFKIYNVL------PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA 188
SI + E +K +N + PD + L+ +A + ++ + LL + +
Sbjct: 19 SIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKRFRPDVFL 78
Query: 189 FNSAMGGYNKLH------------------MYYSTIL--------------VYEKMKSAG 216
+ S + GY K + Y+T++ ++E++K+AG
Sbjct: 79 YTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAG 138
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
+ Y +++ K G E F E P T Y ++ D L K+
Sbjct: 139 CSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSS--CVPTRT-TYTVVIDGLCKAQMLP 195
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+A K F M +KG + D Y +LI F+ +++ A +L KG +V
Sbjct: 196 DACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIV 255
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+ + ++ + +V+ M+ + I ++++ + + A +V ++ ++GC
Sbjct: 256 HGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCA 315
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + Y S+I+ +A VF M +KG + Y +++ + K G + A +
Sbjct: 316 PDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEI 375
Query: 457 VAKMKAKGCEPNVWIYNSLMD---------------------------------MHGRAK 483
+ M G P+ + YNSLMD MHG K
Sbjct: 376 LELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFK 435
Query: 484 NLR--QVEKLWKEM-ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+ + + L+KEM E+ +V P VSYT +I +A + E G + +
Sbjct: 436 DGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECH 495
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
++ +K +I E KL++DM G D + Y + + L D+ + + W
Sbjct: 496 TYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSM-VDTAW 549
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 117/246 (47%), Gaps = 4/246 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
PDA T ++ + + + A +L++ G A+NS M GY KL V
Sbjct: 351 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGV 410
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
Y++M ++GI ++ + +M +K G +++ +LF E + + P + Y IL D
Sbjct: 411 YDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEK--EEVPPTLVSYTILIDG 468
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
LGK+GR EA F++M ++GI+ + Y SLI S A + A++L ++ + G+ D
Sbjct: 469 LGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPD 528
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
+ L+ I+ +V+ DV + M ++ + GF + G ++ +
Sbjct: 529 VQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF-RAAGRALDLEAVK 587
Query: 389 QLISQG 394
Q SQG
Sbjct: 588 QHFSQG 593
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
GC P V+Y ++I+ I +A K F M G + V+A+++++ + K G+ +
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP----DKVSYTT 509
L+ + K P+V++Y S++ + +A +L R VTP D +SYTT
Sbjct: 62 HKLLNQ-ALKRFRPDVFLYTSVIHGYCKAGDL-------DTGYFRAVTPKASLDVISYTT 113
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
VI ++ D + + E + G + ++ K +IE+ +K ++M
Sbjct: 114 VIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSS 173
Query: 570 TKLDERLYHSAMNAL 584
Y ++ L
Sbjct: 174 CVPTRTTYTVVIDGL 188
>gi|297737325|emb|CBI26526.3| unnamed protein product [Vitis vinifera]
Length = 1005
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 126/573 (21%), Positives = 246/573 (42%), Gaps = 66/573 (11%)
Query: 87 LHG------MLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLS 140
LHG ++KD +E ++ + E K L F PE+ T LLI ++ D + L
Sbjct: 277 LHGKVIDFSLVKDGLVEE-SFKTFYEMKNLG-FVPEEVTYSLLISLSSKTGNRDEAIKLY 334
Query: 141 EDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKL 199
ED + ++P +TC+ L+ + + A +L + +A + + + Y KL
Sbjct: 335 EDMRYRRIVPSNYTCASLLTLYYKNGDYSRAVSLFSEMEKNKIVADEVIYGLLIRIYGKL 394
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
+Y +++ + G++ + Y + + + G+ EK + +SR + + FS
Sbjct: 395 GLYEDAEKTFKETEQLGLLTNEKTYIAMAQVHLNSGNFEKALTIMELMRSRNIWFSRFS- 453
Query: 260 HMYKILC----DSLGKSGRAFEALK-----------------FFRDMKEKG------ILE 292
++ + C + L + F+AL D+ EK I +
Sbjct: 454 YIVLLQCYVMKEDLASAEATFQALSKTGLPDAGSCNDMLNLYIKLDLLEKAKDFIFQIRK 513
Query: 293 DPSIYASLICS-----FASITEVKLAEELFKEAEEKGMLRDPE------VCLKLVLM--- 338
DP + +C + ++ A++L +E G+ +D E + LK++L
Sbjct: 514 DPVEFDMELCKTVMKVYCKKGMLRDAKQLIQEMGTNGLFKDSEFIQTLSLILKMLLKTAG 573
Query: 339 -----------YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ EG + K ++ + + D +++ + K+ A++V+
Sbjct: 574 GLSVASHLISKFTREGDISKAQNLNDQLVKLGRGAEDASIASLITLYGKQHKLKKAIEVF 633
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ +GC G++ Y S+I+AY + +A ++ E+ KG + VV+ S +V
Sbjct: 634 SAI--EGCTSGKLIYISMIDAYAKCGKAEEAYHLYEEVTGKGIELGVVSISKVVHALANY 691
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G+ ++A ++ + G E + YN+ ++ A L ++ M V P +Y
Sbjct: 692 GKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVSLGVAPSIQTY 751
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNG-GV-IDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
T+IS Y R R+ D V+ +N+ R +G GV +D ++ + K + E L ++M
Sbjct: 752 NTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREM 811
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+ EG K + Y+ +N AGL +AQ L Q
Sbjct: 812 QEEGIKPGKVSYNIMINVYATAGLHHEAQELFQ 844
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 145/357 (40%), Gaps = 19/357 (5%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S +Y IL G+ G+ A + F +M E G D +++C++A K +
Sbjct: 191 SVIVYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRHKAMLSFY 250
Query: 318 KEAEEKGMLRDPEVCLKLVLM----------------YIEEGLVEKTLDVVESMKNAKLK 361
+E+G++ P + + ++ +++GLVE++ MKN
Sbjct: 251 SAVQERGII--PSIAVFNFMLSSLQKKSLHGKVIDFSLVKDGLVEESFKTFYEMKNLGFV 308
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ +++ SK A+K+YE + + +P T AS++ Y + YS+A +
Sbjct: 309 PEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYTCASLLTLYYKNGDYSRAVSL 368
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F EM++ V Y ++ +YGK G DA + + G N Y ++ +H
Sbjct: 369 FSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQVHLN 428
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ N + + + M R + + SY ++ Y + + G+ D
Sbjct: 429 SGNFEKALTIMELMRSRNIWFSRFSYIVLLQCYVMKEDLASAEATFQALSKT-GLPDAGS 487
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
M+ ++ KL +E+ + ++ + + D L + M G+ A+ L Q
Sbjct: 488 CNDMLNLYIKLDLLEKAKDFIFQIRKDPVEFDMELCKTVMKVYCKKGMLRDAKQLIQ 544
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/376 (19%), Positives = 157/376 (41%), Gaps = 8/376 (2%)
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
Y K H I V+ ++ G Y +++AY K G +E+ L+ E + ++
Sbjct: 620 YGKQHKLKKAIEVFSAIE--GCTSGKLIYISMIDAYAKCGKAEEAYHLYEEVTGKGIELG 677
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
S + +L G+ EA R E G+ D Y + I + + A
Sbjct: 678 VVSISK---VVHALANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHFANS 734
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS--DCISCAIVNG 373
++ G+ + ++ +Y ++K +++ + + + +S + +++
Sbjct: 735 IYDRMVSLGVAPSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISY 794
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+ K A ++ ++ +G PG+V+Y +IN Y L+ +A+++F M + G
Sbjct: 795 YGKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPD 854
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ Y +++ Y ++ + +A + M+ +G P+ +N L+ +A + E+++
Sbjct: 855 SLTYLALIRAYTQSFKFLEAEETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYH 914
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
+ ++PD Y T++ Y + + F+ + R DR I V +
Sbjct: 915 TLLSAGLSPDVACYRTMLRGYLDYGCVEKGITFFEQIR-ESVEPDRFIMSSAVHFYKLAG 973
Query: 554 QIEELVKLLQDMKSEG 569
+ E +L MKS G
Sbjct: 974 KELEAEGILDSMKSLG 989
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 114/270 (42%), Gaps = 55/270 (20%)
Query: 358 AKLKISD-CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
AKL + C+ G+ + R ++ +K+ QL Q P + Y ++ Y ++
Sbjct: 155 AKLSFREMCVVLKEQRGWRQARDFFGWMKL--QLSYQ---PSVIVYTILLRVYGQVGKIK 209
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
AE+ F+EM + G + VA +M+ Y + GR + + + ++ +G P++ ++N ++
Sbjct: 210 LAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRHKAMLSFYSAVQERGIIPSIAVFNFML 269
Query: 477 ------DMHGRA---------------------KNLRQVE-------------------- 489
+HG+ KNL V
Sbjct: 270 SSLQKKSLHGKVIDFSLVKDGLVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDE 329
Query: 490 --KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
KL+++M R++ P + ++++ Y + ++ V ++E N V D I G+++
Sbjct: 330 AIKLYEDMRYRRIVPSNYTCASLLTLYYKNGDYSRAVSLFSEMEKNKIVADEVIYGLLIR 389
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
++ KL E+ K ++ + G +E+ Y
Sbjct: 390 IYGKLGLYEDAEKTFKETEQLGLLTNEKTY 419
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/482 (21%), Positives = 198/482 (41%), Gaps = 45/482 (9%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
E P+ TL ++ L + ++ D ++ L + + PD + ++ S + F A
Sbjct: 188 ELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKA 247
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
++Q + ++ ++ +N + G K + + + + G+ YC ++
Sbjct: 248 KEMIQR-MESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGL 306
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K+ + E A + E +L P + L + L + G+ +A +K+ G +
Sbjct: 307 CKVQEFEVGAGVMDE--MIELGFVPTEAALSS-LVEGLRRKGKVVDAFDLVNRVKKVGAM 363
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+Y +LI S + AE LFKE EKG+ + DV
Sbjct: 364 PSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCAN---------------------DV 402
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
S+ +++ F +R A+ ++I G Y S+IN +C+
Sbjct: 403 TYSI--------------LIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCK 448
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ S A F EM KG VV+Y+S+++ Y G++ +A L +M KG PN +
Sbjct: 449 LGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYT 508
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+ +L+ RA + +L+ EM + + P++V+Y +I + + + N+
Sbjct: 509 FTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMV 568
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA------LR 585
G V D ++ ++ E K + D+ E KL+E Y + ++ LR
Sbjct: 569 QKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLR 628
Query: 586 DA 587
DA
Sbjct: 629 DA 630
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 156/341 (45%), Gaps = 2/341 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ +L S + R F+++ FR M++ ++ ++ A I V + LF E
Sbjct: 161 FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEIL 220
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
G+ D + + ++ + E K ++++ M+++ L + + +++G K + W
Sbjct: 221 SMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNV--VVYNVLIHGLCKNKRVW 278
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
AV++ LI +G +VTY +++ C++ + V EM + GF A SS+V
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLV 338
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ G++ DA LV ++K G P++++YN+L++ + + E L+KEM + +
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLC 398
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
+ V+Y+ +I ++ R + D + F + M G I ++ KL + V
Sbjct: 399 ANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSF 458
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+M +G K Y S ++ + G +A L G
Sbjct: 459 FDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG 499
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 131/594 (22%), Positives = 230/594 (38%), Gaps = 78/594 (13%)
Query: 54 FQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEF 113
F+V A IEL VP S + G+ + + + A+D N KK+
Sbjct: 312 FEVGAGVMDEMIELG-------FVPTEAALSSLVEGLRRKGKVVD-AFDLVNRVKKVGAM 363
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
P LI L + K+D L ++ + + T S L+ S R K A
Sbjct: 364 -PSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIH 422
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L I G +I + +NS + G+ KL + + +++M G+ Y ++ Y
Sbjct: 423 FLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYC 482
Query: 233 KIGDSEKVAALFLECKSRKL--DSTPFSTHM----------------------------- 261
G + L+ E + + ++ F+T +
Sbjct: 483 NKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEV 542
Query: 262 -YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---CSFASITEVK-----L 312
Y ++ + K G +A + M +KG++ D Y LI CS + E K L
Sbjct: 543 TYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDL 602
Query: 313 AEELFKEAE-----------EKGMLRDP-EVCLKLVLMYIEEGLV--------------- 345
E FK E ++G LRD VC ++V ++ LV
Sbjct: 603 HREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDT 662
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
++++M + +L+ I ++++G+SK A +++ +I +GC P VTY ++
Sbjct: 663 SAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTL 722
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
IN C+ L KAE ++ EM V Y + + G + A+ L M KG
Sbjct: 723 INELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGL 781
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
N YN L+ + + + KL EM + PD ++Y+T+I R D ++
Sbjct: 782 LANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIE 841
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
F++ G D ++ ++ + +L DM G K ++ + S
Sbjct: 842 FWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKS 895
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 190/488 (38%), Gaps = 80/488 (16%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P ++ L L+ L + K L K +P + L+ S + KF A
Sbjct: 327 FVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAE 386
Query: 173 TLLQVFITDGEIALLA----FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
L F GE L A ++ + + + + I KM AGI + Y ++
Sbjct: 387 LL---FKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLI 443
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
+ K+G+ + F E + L T S Y L G+ EA + + +M K
Sbjct: 444 NGHCKLGNLSAAVSFFDEMIDKGLKPTVVS---YTSLISGYCNKGKLHEAFRLYHEMTGK 500
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI + + +LI + + A LF E E+ M+ + E T
Sbjct: 501 GIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPN-----------------EVT 543
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+V ++ G K A ++ Q++ +G +P TY +I++
Sbjct: 544 YNV------------------MIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISS 585
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
C +A+K ++ ++ F + YS+++ Y K GR+RDA+ + +M +G + +
Sbjct: 586 LCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMD 645
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ Y L+D + ++ V L K M +++ PDKV YT++I Y++A
Sbjct: 646 LVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKA----------- 694
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G + +A + M EG + Y + +N L AG
Sbjct: 695 ------GSVKKAFG------------------IWDIMIDEGCTPNIVTYTTLINELCKAG 730
Query: 589 LQMQAQWL 596
L +A+ L
Sbjct: 731 LMDKAELL 738
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/449 (18%), Positives = 180/449 (40%), Gaps = 15/449 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + S + G + E A+ Y+E P T LI L ++ +
Sbjct: 469 PTVVSYTSLISGYCNKGKLHE-AFRLYHEMTG-KGIAPNTYTFTTLISALFRANRMTDAF 526
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVR----ARKFKIANTLLQVFITDGEIALLAFNSAM 193
L ++ N++P+ T + ++ + + F++ N ++Q + S++
Sbjct: 527 RLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSL 586
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
++ I + + L+ CY ++ Y K G + E R +D
Sbjct: 587 CSTGRVCEAKKFI---DDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVD 643
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
Y +L D K ++M ++ + D IY S+I ++ VK A
Sbjct: 644 ---MDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKA 700
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
++ ++G + L+ + GL++K + + M + + C ++
Sbjct: 701 FGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDH 760
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
++ AV+++ ++ +G + V+Y ++ +C++ +A K+ EM
Sbjct: 761 LAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPD 819
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ YS+++ + G + A+ M KG +P+ YN L+ A L + +L
Sbjct: 820 CITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRD 879
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDM 522
+M RR V P++ ++ ++ ++ +R+F +
Sbjct: 880 DMIRRGVKPNQATHKSL--SHGASRKFSI 906
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/524 (20%), Positives = 229/524 (43%), Gaps = 10/524 (1%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQE---LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
+P+ ++ L G+ + ++QE L ++ P P+ + +I +
Sbjct: 159 IPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP---PDVVSYTTVINGFFKEGDL 215
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSA 192
D + +LP+ T + ++A+ +A+ A +L + +G + +NS
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY I +KM S G+ D Y +M+ K G + +F R L
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
P T Y L G E M GI + +++ LIC++A +V
Sbjct: 336 --KPEIT-TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A +F + ++G+ D ++ + + G VE + E M + +L + + ++++
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
+ A ++ +++ +G + + SII+++C+ ++EK+F M + G
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
++ YS+++ Y G++ +A L+A M + G +P+ YN+L++ + + + L+
Sbjct: 513 NIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+EME V+PD ++Y ++ + R + Y +G ++ + I++ K
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ +E +++ Q++ +L+ R ++ + AL G +A+ L
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/503 (18%), Positives = 197/503 (39%), Gaps = 78/503 (15%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P+ + ++S +HG Q +E A + + P+ T L+ YL ++ +
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKE-AIGFLKKMHS-DGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
+ + + P+ T TLLQ + T G +
Sbjct: 324 RKMFDSMTKRGLKPEITT----------------YGTLLQGYATKGALV----------- 356
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DS 254
++H + + M GI + + ++ AY K G ++ +F + + + L D+
Sbjct: 357 -EMHG------LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDT 409
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+ T + ILC KSGR +A+++F M ++ + +Y SLI S + A+
Sbjct: 410 VTYGT-VIGILC----KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
EL E ++G +CL + +I++
Sbjct: 465 ELILEMLDRG------ICLDTIFFN-----------------------------SIIDSH 489
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K + K+++ ++ G P +TY+++I+ YC +A K+ M G
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDC 549
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V Y++++ Y K R+ DA+ L +M++ G P++ YN ++ + + ++L+
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+ + +Y ++ + D ++ + + ++ IM+G K+ +
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669
Query: 555 IEELVKLLQDMKSEGTKLDERLY 577
+E L + + G D R Y
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTY 692
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 89/214 (41%), Gaps = 4/214 (1%)
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC---VVAYSSMVA 442
V ++ GCIP +Y ++ C +A ++ M G D C VV+Y++++
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD-CPPDVVSYTTVIN 207
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ K G + A +M +G PNV YNS++ +A+ + + ++ M + V P
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ +Y +++ Y + + + F + +G D ++ K + E K+
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M G K + Y + + G ++ L
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 23/276 (8%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIG---DSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+M GI LD+ + I++++ K G +SEK+ L + ++ P + Y L D
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV-----RIGVKP-NIITYSTLID 522
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+G+ EA K M G+ D Y +LI + I+ ++ A LF+E E G+
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV-- 580
Query: 328 DPEVCLKLVLMYIEEGLVE-------KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
P++ + I +GL + K L V + +L++S I++G K
Sbjct: 581 SPDI---ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS--TYNIILHGLCKNNLT 635
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A+++++ L T+ +I A ++ +A+ +F + G V YS M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ G + + L M+ GC N + NS++
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/488 (22%), Positives = 210/488 (43%), Gaps = 40/488 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ +D+ + G+ K Q A NE K+ RP+ T L++ Q D
Sbjct: 383 PNKIMYDNLIRGLCKIGQLGR-ASKLLNEMIKVGH-RPDTFTYHPLMQGHFQHYDKDGAF 440
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
L + + +LP+A+T ++ + + K A LL+ I++G L N+
Sbjct: 441 ELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEG----LKPNA------ 490
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
MY I+ + K + C+ +E K + + LF
Sbjct: 491 --FMYAPLIIGHSKEGHISLA------CESLENMTK---ANVLPDLFC------------ 527
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
Y L L GR EA +++ ++++G++ D Y+ LI + ++ A++L
Sbjct: 528 ----YNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLL 583
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
++ G+ + + L+ Y + EK +++SM + K + I ++ S+
Sbjct: 584 QQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRS 643
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A V ++ G +P Y+S+I+ C++A KA + EM ++G + +V Y
Sbjct: 644 ENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCY 703
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++++ + ++G I A + + AKG PN Y +L+D + + ++ L+K+M
Sbjct: 704 NALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLD 763
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
R + PD Y + + + A + + + F E N G ++ +V F K +++E
Sbjct: 764 RGIAPDAFVYNVLATGCSDAADLEQAL-FLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQE 822
Query: 558 LVKLLQDM 565
KLL M
Sbjct: 823 TEKLLHVM 830
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/471 (20%), Positives = 200/471 (42%), Gaps = 4/471 (0%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + L++ L+++ + + L + + PD +T S + + +AR F A +
Sbjct: 208 PTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKV 267
Query: 175 LQ-VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + D + + +N + G + E+M G+ D+ Y +M K
Sbjct: 268 FEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCK 327
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G ++ AL E L + +Y L D K G+A EA +M G+ +
Sbjct: 328 GGRLKEAKALLDEMSCSGLKP---NVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPN 384
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+Y +LI I ++ A +L E + G D L+ + + + +++
Sbjct: 385 KIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLN 444
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M+N+ + + ++NG + A + E++IS+G P YA +I + +
Sbjct: 445 EMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEG 504
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
S A + M + + Y+S++ GRI +A A+++ +G P+ + Y+
Sbjct: 505 HISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYS 564
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
L+ + + +NL + ++L ++M + P+ +YT ++ Y ++ + + +
Sbjct: 565 GLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGS 624
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G D I GI++ S+ +E +L +++ G D +Y S ++ L
Sbjct: 625 GDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGL 675
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/499 (19%), Positives = 209/499 (41%), Gaps = 18/499 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE------FRPEKSTLKLLIRYLVQSK 131
PDA + + ++G+ K + +E AK L + +P L+ ++
Sbjct: 313 PDAFTYGALMNGLCKGGRLKE--------AKALLDEMSCSGLKPNVVVYATLVDGFMKEG 364
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFN 190
K + + V P+ L+ + + A+ LL I G ++
Sbjct: 365 KAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYH 424
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
M G+ + + + +M+++GI+ ++ Y ++ + G+S++ L E S
Sbjct: 425 PLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISE 484
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
L F MY L K G A + +M + +L D Y SLI +++ +
Sbjct: 485 GLKPNAF---MYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRI 541
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
+ AEE + + +++G++ D L+ Y + +EK +++ M N+ LK + +
Sbjct: 542 EEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDL 601
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+ G+ K + + + ++ G P Y +I R A V E+++ G
Sbjct: 602 LEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGL 661
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+ YSS+++ K + A+ L+ +M +G EP + YN+L+D R+ ++ +
Sbjct: 662 VPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARN 721
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
++ + + + P+ V+YT +I + + Y + G D + ++ S
Sbjct: 722 VFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCS 781
Query: 551 KLSQIEELVKLLQDMKSEG 569
+ +E+ + L ++M + G
Sbjct: 782 DAADLEQALFLTEEMFNRG 800
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 201/450 (44%), Gaps = 33/450 (7%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQE---LAYDYYNEAKKLPEFRPEKSTLKL 122
EL + + +P+A + ++G+ ++ +++E L + +E K F
Sbjct: 441 ELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF--------- 491
Query: 123 LIRYLVQSKKWDSIVSLS----EDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
+ L+ + +SL+ E+ NVLPD + L+ + + A
Sbjct: 492 MYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQV 551
Query: 179 ITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
G + ++ + GY K + ++M ++G+ ++ Y ++E Y+K D
Sbjct: 552 QKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDH 611
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
EKV+++ +S H+Y I+ +L +S A ++++ G++ D IY
Sbjct: 612 EKVSSIL---QSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIY 668
Query: 298 ASLI---CSFASITE-VKLAEELFKEAEEKGMLRDPEVCLK-LVLMYIEEGLVEKTLDVV 352
+SLI C A + + V L +E+ KE E G+ VC L+ + G + + +V
Sbjct: 669 SSLISGLCKMADMEKAVGLLDEMAKEGLEPGI-----VCYNALIDGFCRSGDISRARNVF 723
Query: 353 ESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+S+ AK + +C++ A+++G K A +Y+ ++ +G P Y +
Sbjct: 724 DSIL-AKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSD 782
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
A +A + EM +G+ V +S++V + K GR+++ L+ M + PN
Sbjct: 783 AADLEQALFLTEEMFNRGYAH-VSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQT 841
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+++ G+A L + +++ E++++K +
Sbjct: 842 VENVITEFGKAGKLCEAHRVFAELQQKKAS 871
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%)
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
+V Y K G +R A +V M G P N L+ RA + V KL ME
Sbjct: 181 LVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAG 240
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ PD +Y+T + A+ +AR+FD K + E R ++ +M+ + +EE
Sbjct: 241 IPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 300
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++M G D Y + MN L G +A+ L
Sbjct: 301 GFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKAL 337
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 452 DAMWLVAKMKA----KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
DAM LV K+K G P+V+ Y++ ++ H +A++ +K+++EM RR ++V+Y
Sbjct: 224 DAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTY 283
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+IS R+ + F E G D G ++ K +++E LL +M
Sbjct: 284 NVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSC 343
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQA 593
G K + +Y + ++ G +A
Sbjct: 344 SGLKPNVVVYATLVDGFMKEGKAAEA 369
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 159/359 (44%), Gaps = 38/359 (10%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+T Y IL +L +GR +A + F +M D Y ++ + +++E++ A +L
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLL 308
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E +G+ +P ++ + +EG V + VVE M + + + +++GF ++
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
AA ++++ +G VTY ++IN CR +AE+V EM+ KG D V Y
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 438 SSMVAMYGKTGRIRDAMW-----------------------------------LVAKMKA 462
+ ++ Y K G++ +A L+ +M +
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
KG E N++ YNSL++ +A NL Q + +M+ + PD +YTT+I A +++E D
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
E G +++ F ++E +LL+ M + + Y+S M
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 207/477 (43%), Gaps = 9/477 (1%)
Query: 105 NEAKKLPEFRPEKSTL--KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASC 162
+EA +L + PEK+T +L++ L + + L F PD T +V
Sbjct: 239 DEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQL---FDEMASPPDVVTYGIMVHGY 295
Query: 163 VRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
+ + A LL G E+ +A+ S + + V E M G+VLD+
Sbjct: 296 CTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDA 355
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
+ +M + + GD F E + R L + + Y L + L ++G EA +
Sbjct: 356 AVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT---YTALINGLCRAGELKEAERV 412
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
++M++KG+ D Y LI + + ++ A + + +K + + L +
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
+G V +++ M + L+++ +++NG K A++ + G P T
Sbjct: 473 QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYT 532
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y +II A C+ +A + EM KG +V Y+ ++ + +GR+ L+ M
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
K PN YNSLM + KN++ +++K M ++V P++ +Y +I + +AR
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ F++E G + + ++ + +K + E +L + M+ E + +Y+
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYN 709
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 150/348 (43%), Gaps = 8/348 (2%)
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVY 209
D T + L+ RA + K A +LQ G ++ + + + GY K+ LV+
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
KM + + Y + + K GD L E S+ L+ F+ Y L + L
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT---YNSLINGL 505
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
K+G +A++ DM E G+ D Y ++I + E+ A L +E +KG+ P
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI--KP 563
Query: 330 EVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ VLM + G VE ++E M + + +++ + + + ++Y
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIY 623
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ ++SQ +P + TY +I +C+ +A EM +KGF +Y++++ + K
Sbjct: 624 KGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKK 683
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+ +A L KM+ + +YN +D+ NL L E+
Sbjct: 684 KKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 38/246 (15%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A ++++++ S P VTY +++ YC ++ A K+ EM +G + VAY+S++A
Sbjct: 272 AHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIA 328
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ G++ DA+ +V M G + ++ ++M R +L + EM++R +
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE--LV- 559
D V+YT +I+ RA E + E G +D +++ + K+ ++ E LV
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 560 --------------------------------KLLQDMKSEGTKLDERLYHSAMNALRDA 587
+LL +M S+G +L+ Y+S +N L A
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKA 508
Query: 588 GLQMQA 593
G QA
Sbjct: 509 GNLEQA 514
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
CR+ L +A ++F E+ +K +Y+ ++ GRI+DA L +M + P+V
Sbjct: 234 CRLPL-DEAVQLFQELPEKN----TCSYNILLKALCTAGRIKDAHQLFDEMASP---PDV 285
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
Y ++ + L KL EM R + + V+YT+VI+ + V+ +
Sbjct: 286 VTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVED 345
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
M+G V+D A+ ++ F + + +M+ G D Y + +N L AG
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405
Query: 590 QMQAQWLQQNFE 601
+A+ + Q E
Sbjct: 406 LKEAERVLQEME 417
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/480 (20%), Positives = 213/480 (44%), Gaps = 19/480 (3%)
Query: 96 TQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVL-PDAHT 154
TQ+ D ++ LP L + + +KW S + + E ++ PD
Sbjct: 44 TQKSPQDVWDALDALPRCVGSWEDLMETVAEFRRQRKWRSAIVIYEWILQGSMFKPDVGC 103
Query: 155 CSRLVASCVRARKFKIA-NTL-----LQVFITDGEIALLAFNSAMGGYNKLHMYYSTILV 208
+ L+ + R +++ A NT Q T+ +FN M Y++ V
Sbjct: 104 FNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTE-----TSFNVLMAAYSRGGQLERAERV 158
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+MK + Y +E K G + +F E ++R + P + + + ++ +
Sbjct: 159 LHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGV---PPAVNTFTLMINI 215
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAEELFKEAEEKGML 326
GK+ + +A F+ M++ L PS+ Y +LI + A AEE+F E + G +
Sbjct: 216 YGKAHHSAKAEHLFQSMRKA--LCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFV 273
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D L+ Y G +V E+M A +K +++ F + A +
Sbjct: 274 PDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAI 333
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
Y+ + G P ++ +++A+ + + AE ++ G + ++S++ YG
Sbjct: 334 YDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGN 393
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
+GR+ L M+ C+P++ N+L++++ + + + E+++ +E + TPD +S
Sbjct: 394 SGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMS 453
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+T+++ AY++ + + CV Y + + G + DRA A +++ Q++E+ +++ +
Sbjct: 454 WTSLMGAYSKRKLYRKCVSVYQKMLIAGCIPDRATAKVLLSSCRGPEQVKEVTDMIETQR 513
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/407 (19%), Positives = 160/407 (39%), Gaps = 39/407 (9%)
Query: 196 YNKLHMYYSTILVYEKMKSAGIV-LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
+ + + S I++YE + + D GC+ +M+AY + + F K K
Sbjct: 75 FRRQRKWRSAIVIYEWILQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMK--KFQC 132
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
P T + +L + + G+ A + +MKE Y + + +LAE
Sbjct: 133 LPTETS-FNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAE 191
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
++F+E + +G+ P LM +N +
Sbjct: 192 DVFREMQNRGV---PPAVNTFTLM--------------------------------INIY 216
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A +++ + C P TY ++INA+ R +AE++F E+Q GF +
Sbjct: 217 GKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDI 276
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
Y++++ Y + G A + M G + + YN L+D GRA + + ++
Sbjct: 277 YTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDS 336
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M++ P S+ ++SA+ +A F G D + ++G + +
Sbjct: 337 MKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGR 396
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
++++ L + M+ K D ++ +N G +A+ + + E
Sbjct: 397 MDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLE 443
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 198/485 (40%), Gaps = 13/485 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
PE TL L+ L++ ++++ ++ L +D NV PD + S +V S + F A +
Sbjct: 94 PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153
Query: 175 LQVF-ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ +++++ +N + G K + ++E ++ ++ G ++ Y K
Sbjct: 154 IHWMEFNQCKLSIVVYNVLIHGLCK------SRRIWEALEIKNCLMQKGLEANVVTYYGK 207
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
++E LF E + L + + Y IL DS + G A+ F M + I
Sbjct: 208 FNEAE---LLFKEMGEKGLCANHIT---YSILIDSFCRRGEMDNAIGFLDKMTKASIEFT 261
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y SLI + + A+ F E +KG+ L+ Y EG K V
Sbjct: 262 VYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYN 321
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M + + AI++G + A++++ ++ + +P +VTY +I +CR
Sbjct: 322 EMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSG 381
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
S+A + EM KGF Y +++ GR+ +A V + + N Y+
Sbjct: 382 NISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYS 441
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+L+ + + + + M R V D V Y +I R + E +
Sbjct: 442 ALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNH 501
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G D I M+ SK ++E L M EG + Y + +N L AGL +A
Sbjct: 502 GLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKA 561
Query: 594 QWLQQ 598
+ L +
Sbjct: 562 ELLSK 566
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 168/386 (43%), Gaps = 10/386 (2%)
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
E + +NS + GY KL + +++M G+ Y ++ Y G+ K
Sbjct: 259 EFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFK 318
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI- 301
++ E ++ + +T+ + + L ++ EA++ F +MKE+ I+ Y +I
Sbjct: 319 VYNEMTAKGISP---NTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIE 375
Query: 302 --CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
C +I+E A L E KG + D L+ G V + + V+ +
Sbjct: 376 GHCRSGNISE---AFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDH 432
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
K+++ A+V+G+ K + AV ++ +G V YA +I+ R
Sbjct: 433 HKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALF 492
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
+ EM G V Y++M+ + K G +++A L M +GC PNV Y +L++
Sbjct: 493 GLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGL 552
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+A + + E L KE VTP+ ++Y + R + V+ ++ + G +
Sbjct: 553 CKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM-LKGFLATT 611
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDM 565
I++ F +L +IEE KLL M
Sbjct: 612 VSYNILIRGFCRLGKIEEATKLLHGM 637
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 167/419 (39%), Gaps = 72/419 (17%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
++ + S + GY ++ VY +M + GI ++ + I+ + + LF
Sbjct: 296 TVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLF 355
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E K RK+ + + Y ++ + +SG EA +M KG + D Y LI
Sbjct: 356 GEMKERKIMPSEVT---YNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGL 412
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG-----------LVEK--TLDV 351
S+ V A+E + + + LV Y +EG +VE+ +D+
Sbjct: 413 CSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDL 472
Query: 352 V----------------------ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
V + M N L+ I +++ SK A +++
Sbjct: 473 VCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDI 532
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKV------------------FIE------- 424
++ +GC+P VTY ++IN C+ L KAE + F++
Sbjct: 533 MVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGN 592
Query: 425 MQQ---------KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
M++ KGF V+Y+ ++ + + G+I +A L+ M P+ Y+++
Sbjct: 593 MEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTI 652
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+ + NL++ KLW M + + PD ++Y+ ++ A E + + +E G
Sbjct: 653 IYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRG 711
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 123/254 (48%), Gaps = 26/254 (10%)
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASI-TEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
KFF + + +++D + F SI T + ++ ++ A DP + L
Sbjct: 21 KFFCNFRSSTVIQDKEDF-----QFISILTSILRGKQSWRIA-----FNDPFISRNLKPS 70
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
++++ L+ +L+ MK+ L A++NG + R + + +++ ++S P
Sbjct: 71 HVDKVLMMLSLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPD 130
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC---VVAYSSMVAMYGKTGRIRDAMW 455
Y++++ + C + ++KA+++ M+ F++C +V Y+ ++ K+ RI +A+
Sbjct: 131 IYIYSAVVRSLCELKDFNKAKEMIHWME---FNQCKLSIVVYNVLIHGLCKSRRIWEALE 187
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
+ + KG E NV Y +G+ + E L+KEM + + + ++Y+ +I ++
Sbjct: 188 IKNCLMQKGLEANVVTY------YGK---FNEAELLFKEMGEKGLCANHITYSILIDSFC 238
Query: 516 RAREFDMCVKFYNE 529
R E D + F ++
Sbjct: 239 RRGEMDNAIGFLDK 252
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/438 (18%), Positives = 167/438 (38%), Gaps = 21/438 (4%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNE--AKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
P + S + G + + + A+ YNE AK + P T +I L ++
Sbjct: 294 TPTVVTYTSLISGYCNEGEWHK-AFKVYNEMTAKGIS---PNTYTFTAIISGLCRANMMA 349
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAM 193
+ L + K ++P T + ++ R+ A LL + G + + +
Sbjct: 350 EAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLI 409
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G + + + L++ CY ++ Y K G + + C+
Sbjct: 410 SGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVS---ACRVMVER 466
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
Y IL D + ++M G+ D IY ++I + +K A
Sbjct: 467 GVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEA 526
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L+ ++G L + L+ + GL++K + + + +SD I G
Sbjct: 527 FGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKA-----ELLSKETLVSDVTPNHITYG 581
Query: 374 -----FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++ AV+++ ++ +G + V+Y +I +CR+ +A K+ M
Sbjct: 582 CFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDN 640
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
+ YS+++ K +++A+ L M KG +P+ Y+ L+ A L +
Sbjct: 641 DILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKA 700
Query: 489 EKLWKEMERRKVTPDKVS 506
+L EM RR + + V+
Sbjct: 701 FELRDEMIRRGMRSNHVT 718
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 188/401 (46%), Gaps = 13/401 (3%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+++ M GY + ++V++++K G Y ++ Y KIG KV+ K
Sbjct: 432 YHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIG---KVSKALEVSK 488
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
++ + Y +L + + A F D+ + G+ D +Y ++I +F +
Sbjct: 489 MMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMG 548
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ A KE +++ + ++ + G + + L++ + M+ S CI
Sbjct: 549 NMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMR-----WSGCIPT 603
Query: 369 -----AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
A++ G ++ AV++ +++ G P + TY +I++ Y + KA + F
Sbjct: 604 VHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFT 663
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+++ +G + V Y +++ K+GR++ A+ + +M ++ N ++YN L+D R
Sbjct: 664 KLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRG 723
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
++ + +L ++M++ V PD +YT+ I+A +A + K E + G +
Sbjct: 724 DVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYT 783
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ +++ S E+ +K Q+MKS G K D+ +YH M +L
Sbjct: 784 TLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSL 824
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 173/376 (46%), Gaps = 4/376 (1%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+++++ + Y K+ + V + M+ AGI + Y ++ + ++ D A+F
Sbjct: 463 SVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVF 522
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ D +Y + + G A++ ++M+++ + +I F
Sbjct: 523 EDVVK---DGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGF 579
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
A +++ A E+F G + L+L +E+ +EK +++++ M A + ++
Sbjct: 580 ARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNE 639
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
I++G++ A + + +L ++G TY +++ A C+ A V E
Sbjct: 640 HTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTRE 699
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M + + Y+ ++ + + G + +A L+ +MK +G +P++ Y S ++ +A +
Sbjct: 700 MSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGD 759
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG- 543
+++ K +EME V P+ +YTT+I + RA + +K + E + G D+A+
Sbjct: 760 MQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHC 819
Query: 544 IMVGVFSKLSQIEELV 559
+M + S+ S EE +
Sbjct: 820 LMTSLLSRASVAEEYI 835
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/503 (20%), Positives = 198/503 (39%), Gaps = 7/503 (1%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
Q PD F+ +H + K QE + K+ P T + I+ L +
Sbjct: 210 QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKR--GVCPNLFTFNIFIQGLCRKGAI 267
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
D L E + PD + + L+ + K A L + G E +N+
Sbjct: 268 DEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G+ K M + + G + D Y ++ GD + A+F E +
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
S +Y L L K G +AL+ +DM E G D Y ++ + +
Sbjct: 388 KH---SIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A + +A KG + D L+ Y ++ ++K ++++++M + + ++N
Sbjct: 445 ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G K R V ++ ++ +GC P +TY +I ++C+ S+A ++F EM+ +G
Sbjct: 505 GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKM-KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+V +++ G + A L + K + I+N +++ N+ EKL
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKL 624
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+ +M PD +Y +I +Y + D+ F E G V G ++
Sbjct: 625 FHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCV 684
Query: 552 LSQIEELVKLLQDMKSEGTKLDE 574
++ E V ++ M G +E
Sbjct: 685 THRLSEAVVIINLMVQNGIVPEE 707
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/499 (20%), Positives = 205/499 (41%), Gaps = 78/499 (15%)
Query: 111 PEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCS-RLVASCVRARKFK 169
P + + + +L+ Y S+ + + +D IY PD +T + R+ + C+ R
Sbjct: 109 PSVQSYNAIMNILVEYGYFSQAHKVYMRM-KDIGIY---PDVYTHTIRMKSFCITGRPTA 164
Query: 170 IANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
L + E +++ + + G+ K + ++++M GI D + +++
Sbjct: 165 ALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIH 224
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
K G+ ++ LF + R + F+ + I L + G EA + + +G
Sbjct: 225 VLCKKGNVQESEKLFSKVMKRGVCPNLFT---FNIFIQGLCRKGAIDEAARLLESIVSEG 281
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
+ D Y +LIC F +++ AE C
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAE-----------------CY---------------- 308
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+ M N+ ++ ++ I+NGF K A K+ + +G IP + TY+S+IN
Sbjct: 309 --LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGL 366
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK-------- 461
C ++A VF E +KGF ++ Y+++V K G + A+ L+ M
Sbjct: 367 CNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDI 426
Query: 462 ---------------------------AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
AKGC P+++ +N+L+D + + +N+ + ++
Sbjct: 427 WTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M +TPD ++Y T+++ +AR+ D V + G + I++ F K +
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546
Query: 555 IEELVKLLQDMKSEGTKLD 573
+ E ++L ++MK+ G D
Sbjct: 547 VSEAMELFKEMKTRGLTPD 565
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 191/460 (41%), Gaps = 16/460 (3%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTI 206
+ PD T ++L+ + + + L + G L FN + G +
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAA 271
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH--MYKI 264
+ E + S G+ D Y ++ + K S+ V A EC K+ ++ + Y
Sbjct: 272 RLLESIVSEGLTPDVISYNTLICGFCK--HSKLVEA---ECYLHKMVNSGVEPNEFTYNT 326
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
+ + K+G A K RD KG + D Y+SLI + ++ A +F EA EKG
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ LV ++GLV + L +++ M +VNG K A
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+ I++GCIP T+ ++I+ YC+ KA ++ M G V+ Y++++
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K ++ + + M KGC PN+ YN L++ + + + + +L+KEM+ R +TPD
Sbjct: 507 CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDI 566
Query: 505 VSYTTVISAYNRAREFD----MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
V+ T+I E D + V E++ + AI IM+ F + K
Sbjct: 567 VTLCTLICGLCSNGELDKAYELFVTIEKEYKFS---YSTAIFNIMINAFCXKLNVSMAEK 623
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAG-LQMQAQWLQQN 599
L M D Y +++ G + + +L +N
Sbjct: 624 LFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLEN 663
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 150/413 (36%), Gaps = 66/413 (15%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
RD+ + +PD + S ++G+ D +Y +K F+ L++ L
Sbjct: 345 RDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK--GFKHSIILYNTLVKGLS 402
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LL 187
+ + L +D + PD T + +V + AN +L I G I +
Sbjct: 403 KQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIF 462
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
FN+ + GY K I + + M S GI D Y ++ C
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL---------------C 507
Query: 248 KSRKLDS-------------TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
K+RKLD+ TP + Y IL +S K + EA++ F++MK +G+ D
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTP-NIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDI 566
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
+LIC S E+ A ELF E
Sbjct: 567 VTLCTLICGLCSNGELDKAYELFVTIE--------------------------------- 593
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
K K S I ++N F + A K++ ++ C P TY +I++YC+
Sbjct: 594 -KEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGN 652
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
A +E KG ++ T R+ +A+ ++ M G P
Sbjct: 653 IDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 148/337 (43%), Gaps = 14/337 (4%)
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM-LRD 328
G+ G+ EA+ F M +PS+ S+ +I + + F +A + M ++D
Sbjct: 87 GRKGKVQEAVNVFERMDFYDC--EPSVQ-----SYNAIMNILVEYGYFSQAHKVYMRMKD 139
Query: 329 ----PEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
P+V + M + G L ++ +M + + CA+++GF K
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A ++++++ QG P +T+ +I+ C+ ++EK+F ++ ++G + ++ +
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ G I +A L+ + ++G P+V YN+L+ + L + E +M V P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
++ +Y T+I+ + +A K + G + D ++ + + +
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
+ +G K LY++ + L GL +QA L ++
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKD 416
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 38/299 (12%)
Query: 342 EGLVEKTLDVVESM-KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
G E DV+ M KN K+ + + I+ + ++ AV V+E++ C P
Sbjct: 53 HGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQ 112
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
+Y +I+N +S+A KV++ M+ G V ++ + + TGR A+ L+ M
Sbjct: 113 SYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNM 172
Query: 461 KAKGCE-----------------------------------PNVWIYNSLMDMHGRAKNL 485
+GCE P++ +N L+ + + N+
Sbjct: 173 PGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNV 232
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
++ EKL+ ++ +R V P+ ++ I R D + G D +
Sbjct: 233 QESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTL 292
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN--FEG 602
+ F K S++ E L M + G + +E Y++ +N AG+ A + ++ F+G
Sbjct: 293 ICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG 351
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 117/531 (22%), Positives = 218/531 (41%), Gaps = 46/531 (8%)
Query: 75 TAVPDAKKFDSFLHGMLKDPQTQE-LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
+ +PD L G+ + ++QE L + + P+ + +I +
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDS 212
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSA 192
D S + + PD T S ++A+ + + A +L + +G + + +NS
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSI 272
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY I +KM+S G+ D Y +M
Sbjct: 273 LHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLM------------------------ 308
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D L K+GR+ EA K F M ++G+ D + Y +L+ +A+ +
Sbjct: 309 --------------DYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVE 354
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
L G+ D V L+ Y ++ V++ + V M+ L + A++
Sbjct: 355 MHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIG 414
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
K A+ +EQ+I +G P + Y S+I++ C + KAE++ +EM +G
Sbjct: 415 ILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL 474
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+ ++S++ + K GR+ ++ L M G +PNV Y++L+D + A + + KL
Sbjct: 475 NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLL 534
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG---GVIDRAIAGIMVGVF 549
M + PD V+Y T+I+ Y R D + + E +G +I I I+ G+F
Sbjct: 535 SSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI--ILQGLF 592
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ +L + GT+L+ Y+ ++ L L +A + QN
Sbjct: 593 HT-RRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 642
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/509 (19%), Positives = 212/509 (41%), Gaps = 6/509 (1%)
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
D + PD + + ++G K+ + + AY Y+E P+ T +I L +
Sbjct: 186 DDRGGGSAPDVVSYTTVINGFFKEGDSDK-AYSTYHEMLD-RRISPDVVTYSSIIAALCK 243
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLA 188
+ D + + V+P+ T + ++ + + K A L+ +DG E ++
Sbjct: 244 GQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+NS M K +++ M G+ D YC +++ Y G ++ AL L+
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHAL-LDLM 362
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
R + H++ IL + K + EA+ F M++ G+ + Y ++I
Sbjct: 363 VR--NGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
V A F++ ++G+ + V L+ +K +++ M + + ++
Sbjct: 421 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFN 480
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+I++ K + K+++ ++ G P +TY+++I+ YC +A K+ M
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV 540
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G V Y++++ Y + R+ DA+ L +M + G PN+ YN ++ +
Sbjct: 541 GMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 600
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
++L+ + + + +Y ++ + D ++ + + ++ IM+G
Sbjct: 601 KELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 660
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLY 577
K+ + +E L + + G D R Y
Sbjct: 661 LLKVGRNDEAKDLFAALSANGLVPDVRTY 689
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/514 (19%), Positives = 193/514 (37%), Gaps = 82/514 (15%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY---------- 196
V P HT L+ C RA + + L + G + + F + G
Sbjct: 83 VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 197 -----------------------------NKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
N+ + + + G D Y +
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
+ ++K GDS+K + + E R++ + Y + +L K +A++ M +
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVT---YSSIIAALCKGQAMDKAMEVLTTMVK 259
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLV 345
G++ + Y S++ + S + K A K+ G+ +P+V LM + G
Sbjct: 260 NGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGV--EPDVVTYNSLMDYLCKNGRS 317
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+ + +SM L+ C ++ G++ + + + ++ G P + +
Sbjct: 318 TEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNIL 377
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
I AY + +A VF +M+Q G + VV Y +++ + K+G + DAM +M +G
Sbjct: 378 ICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL 437
Query: 466 EPNVWIYNSLMD---------------------------------MHGRAKNLRQV--EK 490
PN+ +Y SL+ +H K R + EK
Sbjct: 438 TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK 497
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L+ M R V P+ ++Y+T+I Y A + D K + G D ++ +
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYC 557
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++S++++ + L ++M S G + Y+ + L
Sbjct: 558 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 113/273 (41%), Gaps = 17/273 (6%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIG---DSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+M GI L++ + I+ ++ K G +SEK+ L + ++ P + Y L D
Sbjct: 466 EMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMV-----RIGVKP-NVITYSTLID 519
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+G+ EA K M G+ D Y +LI + ++ + A LFKE G+
Sbjct: 520 GYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGV-- 577
Query: 328 DPEVCLKLVLM----YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
P + +++ + K L V + +L++S I++G K A
Sbjct: 578 SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELS--TYNIILHGLCKNNLTDEA 635
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+++++ L T+ +I A ++ +A+ +F + G V YS M
Sbjct: 636 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAEN 695
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ G + + L M+ GC N + NS++
Sbjct: 696 LIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 728
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/524 (20%), Positives = 229/524 (43%), Gaps = 10/524 (1%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQE---LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
+P+ ++ L G+ + ++QE L ++ P P+ + +I +
Sbjct: 159 IPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP---PDVVSYTTVINGFFKEGDL 215
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSA 192
D + +LP+ T S ++A+ +A+ A +L + +G + +NS
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY I +KM S G+ D Y +M+ K G + +F R L
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
P T Y L G E M GI + +++ LIC++A +V
Sbjct: 336 --KPEIT-TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A +F + ++G+ D ++ + + G VE + E M + +L + + ++++
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
+ A ++ +++ +G + + SII+++C+ ++EK+F M + G
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
++ YS+++ Y G++ +A L+A M + G +P+ YN+L++ + + + L+
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+EME V+PD ++Y ++ + R + Y +G ++ + I++ K
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ +E +++ Q++ +L+ R ++ + AL G +A+ L
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 97/505 (19%), Positives = 202/505 (40%), Gaps = 82/505 (16%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P+ + ++S +HG Q +E A + + P+ T L+ YL ++ +
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKE-AIGFLKKMHS-DGVEPDVVTYNSLMDYLCKNGRC--- 320
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA--NTLLQVFITDGEIALLAFNSAMG 194
+E K+++ + R K +I TLLQ + T G +
Sbjct: 321 ---TEARKMFDSMTK------------RGLKPEITTYGTLLQGYATKGALV--------- 356
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL-- 252
++H + + M GI + + ++ AY K G ++ +F + + + L
Sbjct: 357 ---EMHG------LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 407
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D+ + T + ILC KSGR +A+++F M ++ + +Y SLI S +
Sbjct: 408 DTVTYGT-VIGILC----KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A+EL E ++G +CL + +I++
Sbjct: 463 AKELILEMLDRG------ICLDTIFFN-----------------------------SIID 487
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
K + K+++ ++ G P +TY+++I+ YC +A K+ M G
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 547
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
V Y++++ Y K R+ DA+ L +M++ G P++ YN ++ + + ++L+
Sbjct: 548 DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 607
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+ + +Y ++ + D ++ + + ++ IM+G K+
Sbjct: 608 VGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 667
Query: 553 SQIEELVKLLQDMKSEGTKLDERLY 577
+ +E L + + G D R Y
Sbjct: 668 GRNDEAKDLFAALSANGLVPDVRTY 692
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 163/414 (39%), Gaps = 23/414 (5%)
Query: 72 HHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSK 131
H PD ++S + + K+ + E + + K+ +PE +T L++
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR--GLKPEITTYGTLLQGYATKG 353
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL----L 187
+ L + + P+ + S L+ C A++ K+ +L VF + L +
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILI--CAYAKQGKVDQAML-VFSKMRQQGLNPDTV 410
Query: 188 AFNSAMG-----GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ + +G G + M Y ++ E++ IV Y ++ + +K
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV-----YNSLIHSLCIFDKWDKAKE 465
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L LE R + T + + DS K GR E+ K F M G+ D Y++LI
Sbjct: 466 LILEMLDRGI---CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ ++ A +L GM D L+ Y + +E L + M+++ +
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
I+ G + R AA ++Y + G TY I++ C+ L +A ++F
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ ++ M+ K GR +A L A + A G P+V Y SLM
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY-SLM 695
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 4/214 (1%)
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC---VVAYSSMVA 442
V ++ GCIP +Y ++ C +A ++ M G D C VV+Y++++
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD-CPPDVVSYTTVIN 207
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ K G + A +M +G PNV Y+S++ +A+ + + ++ M + V P
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ +Y +++ Y + + + F + +G D ++ K + E K+
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M G K + Y + + G ++ L
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 23/276 (8%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIG---DSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+M GI LD+ + I++++ K G +SEK+ L + K D +ST L D
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI-GVKPDIITYST-----LID 522
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+G+ EA K M G+ D Y +LI + I+ ++ A LF+E E G+
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV-- 580
Query: 328 DPEVCLKLVLMYIEEGLVE-------KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
P++ + I +GL + K L V + +L++S I++G K
Sbjct: 581 SPDI---ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS--TYNIILHGLCKNNLT 635
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A+++++ L T+ +I A ++ +A+ +F + G V YS M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ G + + L M+ GC N + NS++
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 178/375 (47%), Gaps = 3/375 (0%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
++M G+ +++ CY +++AY + D ++VA + ++ ++ T Y IL D L
Sbjct: 167 DEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPT---VGTYTILVDGL 223
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
+ + F +MK K + D Y+S+I ++ V+ A E+F E G+ +
Sbjct: 224 SAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNE 283
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
L+ + + G +E +V M+ + I+ + +++G+ ++ A+++
Sbjct: 284 HTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMI 343
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ G TY ++ R +A+ + M +KG V+Y+++++++ G
Sbjct: 344 MEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 403
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ +A L +M G EP++ YN +MD + + ++R+ E+ EME++ + PD SY
Sbjct: 404 MVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAA 463
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
++ + + D+ ++ + E + G + ++ +K + EE +L +M +G
Sbjct: 464 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 523
Query: 570 TKLDERLYHSAMNAL 584
D+ LY + + +L
Sbjct: 524 LTPDDALYSALVGSL 538
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 110/227 (48%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+V+G+ K A ++ +++ G + Y S+++AY R + ++ M+ +G
Sbjct: 149 VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 208
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ V Y+ +V I + +MK+K +V+ Y+S+++ + RA N+R+
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 268
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+++ E + P++ +Y +I+ + + + + + ++ G I++ + M+ +
Sbjct: 269 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + +++ +++ M+ G +LD Y++ LR A +A+ L
Sbjct: 329 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNL 375
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 35/181 (19%)
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR---------------- 481
S +V Y K+GR+ A L+ +M G + N YNSL+D + R
Sbjct: 147 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 206
Query: 482 -------------------AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
A+++ +VE +++EM+ + ++ D Y++VI+AY RA
Sbjct: 207 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 266
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ ++E NG + G ++ F K+ Q+E L+ DM+ G +++ ++++ ++
Sbjct: 267 ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMID 326
Query: 583 A 583
Sbjct: 327 G 327
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 174/406 (42%), Gaps = 4/406 (0%)
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
E +L FN + G S V+E M+ I D Y +++ Y K G+++K
Sbjct: 222 EPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAME 281
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
F + + R L+ + Y L + G L +++M+E+G+ P Y+ +I
Sbjct: 282 KFTDMEKRNLEPDKIT---YLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIG 338
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+F+ +KG + + L+ Y + G V + +++ E MK +
Sbjct: 339 GLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEP 398
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
D IVNG K AV+ +E + Y+S+I+ + +AEK F
Sbjct: 399 DDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFF 458
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
EM ++G + Y++++ K+G++ +A+ L +M+ +GC+ V+ Y L+ +
Sbjct: 459 EEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKE 518
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
+ KLW M + +TP S+ + + + K +E G + + A
Sbjct: 519 HRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPETAFE 578
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
M+ V K + E+ KL + G ++ R+ +NALR AG
Sbjct: 579 D-MINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKAG 623
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 162/379 (42%), Gaps = 38/379 (10%)
Query: 223 CYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFF 282
CY +++ D ++V +F E K + T F+ + L S G G E L +
Sbjct: 157 CYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANS---LIRSFGALGMVEELLWVW 213
Query: 283 RDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
R MKE GI +PS+Y +F + L +F E+ E+
Sbjct: 214 RRMKESGI--EPSLY-----TFNFLLN-GLVNSMFIESAER------------------- 246
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
V E M+ K+ ++ G+ K A++ + + + P ++TY
Sbjct: 247 --------VFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITY 298
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
++I A + ++ EM+++G + AYS ++ K GR + + M
Sbjct: 299 LTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNK 358
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
KGC+ NV IY +L+D +G+ N+ + L++ M+ PD V+Y +++ ++ D
Sbjct: 359 KGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDE 418
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
V+++ + N ++ ++ K +++E K ++M G D Y++ ++
Sbjct: 419 AVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALID 478
Query: 583 ALRDAGLQMQAQWLQQNFE 601
AL +G +A L + E
Sbjct: 479 ALAKSGKMEEALVLFKRME 497
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 104/236 (44%), Gaps = 35/236 (14%)
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y S+I+ + + + +F E ++KGF V A +S++ +G G + + +W+ +MK
Sbjct: 158 YVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMK 217
Query: 462 AKGCEPNVWI-----------------------------------YNSLMDMHGRAKNLR 486
G EP+++ YN+++ + +A N +
Sbjct: 218 ESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTK 277
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ + + +ME+R + PDK++Y T+I A FD C+ Y E G I +++
Sbjct: 278 KAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVI 337
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
G K + E + ++M +G K + +Y + ++A G +A L + +G
Sbjct: 338 GGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKG 393
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 187/445 (42%), Gaps = 20/445 (4%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F+ +H + + QE + N+ K P T+ + I+ Q + +
Sbjct: 214 PDIMAFNKLIHTLCRKGHVQE-SERLLNKVLK-RGVSPNLFTVNIFIQGFCQRAMLNEAI 271
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKI--ANTLLQVFITDG-EIALLAFNSAMG 194
L + + PD T + L+ C + FK+ A L+ + +G E +NS +
Sbjct: 272 RLLDGVG-RGLTPDVITYNTLI--CGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIID 328
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
GY KL M + + G V D YC ++ + GD ++ +F E + L
Sbjct: 329 GYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKP 388
Query: 255 TPFSTHMYKILCDSLGKS----GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+LC++L K G +ALK +M E G D Y +I I V
Sbjct: 389 N-------LVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCV 441
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A+ L +A KG L D L+ Y ++ ++ +++V+ M N + +I
Sbjct: 442 SDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSI 501
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+NG K Y + ++ ++ +GC+P +TY + ++C+ +A + EMQ KG
Sbjct: 502 LNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGL 561
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK-GCEPNVWIYNSLMDMHGRAKNLRQVE 489
VV + +++ + G + A L ++ + + YN +++ N+ E
Sbjct: 562 TPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAE 621
Query: 490 KLWKEMERRKVTPDKVSYTTVISAY 514
KL+ +M +PD +Y +I +
Sbjct: 622 KLFNKMCENGFSPDSYTYRVMIDGF 646
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/481 (19%), Positives = 203/481 (42%), Gaps = 32/481 (6%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + ++ LV+ + +D + + ++PD +T + + S R + A L
Sbjct: 109 PSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRL 168
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L + G E + +A+ + +GG+ + + ++E+M GI D + +++ +
Sbjct: 169 LNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCR 228
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHM-------------------------------Y 262
G ++ L + R + F+ ++ Y
Sbjct: 229 KGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITY 288
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
L L K+ + EA + R M +G D Y S+I + + ++ A+++ ++
Sbjct: 289 NTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAF 348
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
KG + D L+ ++G +++ ++V LK + + +V G S++
Sbjct: 349 KGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQ 408
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+K+ ++ GC P TY +IN C+I S A+ + I+ KG V +++++
Sbjct: 409 ALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLID 468
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
Y K ++ +A+ +V +M G P+V YNS+++ +A V +K M + P
Sbjct: 469 GYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVP 528
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ ++Y + ++ +AR+ + + E + G D G ++ F ++ +L
Sbjct: 529 NIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLF 588
Query: 563 Q 563
+
Sbjct: 589 K 589
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/404 (20%), Positives = 153/404 (37%), Gaps = 44/404 (10%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
RD + VPD + S ++G+ +D A + +NEA + +P L++ L
Sbjct: 344 RDGAFKGFVPDESTYCSLINGLCQDGDIDR-AINVFNEAME-KGLKPNLVLCNTLVKGLS 401
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LL 187
Q + L + PD T + ++ + A+ L+ I G + +
Sbjct: 402 QQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVF 461
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
FN+ + GY K + I + ++M + G+ D Y I+ K G E V F
Sbjct: 462 TFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLM 521
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+ + Y IL +S K+ + EAL +M+ KG+ D + +L+ F
Sbjct: 522 MEKGCVPNIIT---YNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDN 578
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++ A +LFK +E + K S I+
Sbjct: 579 GDLDGAYQLFKRVDE------------------------------------QYKFSHTIA 602
Query: 368 C--AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++N F+ + A K++ ++ G P TY +I+ +C+ + +
Sbjct: 603 TYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVK 662
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+KG + + ++ R+ +A+ ++ M KG P V
Sbjct: 663 IEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEV 706
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 122/310 (39%), Gaps = 36/310 (11%)
Query: 276 FEALKFFRDMK-EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
+AL+ F +K E G Y +I E + EE+ E
Sbjct: 21 LKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETR------------- 67
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
M I+ GL+E + +M+N + ++ AV V+E++
Sbjct: 68 ---MNIDNGLLEGVY--IGAMRN----------------YGRKGKIQEAVDVFERMDFFN 106
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
C P +Y +I+N + +A KV++ M+ KG V ++ + + +T R A
Sbjct: 107 CEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAAR 166
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L+ M ++GCE + Y +++ + + +L++EM + PD +++ +I
Sbjct: 167 RLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTL 226
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
R + N+ G + I + F + + + E ++LL D G D
Sbjct: 227 CRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLL-DGVGRGLTPDV 285
Query: 575 RLYHSAMNAL 584
Y++ + L
Sbjct: 286 ITYNTLICGL 295
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 71/161 (44%)
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y + YG+ G+I++A+ + +M CEP+V YN++M++ + Q K++ M
Sbjct: 78 VYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRM 137
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + PD ++T + ++ R + N G ++G F + +
Sbjct: 138 RDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHR 197
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
E +L ++M G D ++ ++ L G +++ L
Sbjct: 198 VEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERL 238
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 80/190 (42%), Gaps = 6/190 (3%)
Query: 417 KAEKVFIEMQQK-GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK---GCEPNVWIY 472
KA ++F ++++ GF ++ Y M+ G G ++A+ + G V+I
Sbjct: 22 KALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYI- 80
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
M +GR +++ +++ M+ P SY +++ R FD K Y R
Sbjct: 81 -GAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRD 139
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
G V D I + F + S+ +LL +M S+G + Y + + + +++
Sbjct: 140 KGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVE 199
Query: 593 AQWLQQNFEG 602
A L + G
Sbjct: 200 AHELFEEMLG 209
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/480 (21%), Positives = 200/480 (41%), Gaps = 45/480 (9%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P K +LIR Q L +LP S ++ + R++K A L
Sbjct: 330 PTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCL 389
Query: 175 LQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
+ G + +N+ + + + H + ++++MK AG+ Y ++ Y K
Sbjct: 390 FEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKK 449
Query: 235 GDSEKVAALFLEC--KSRKLDSTPFSTHMYKILCDSLGKSGRAFE-ALKFFRDMKEKGIL 291
G ++ L+ E + K + + T M + + + F+ A +MK+ G+
Sbjct: 450 GCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYI------AKKDFDNAYALLDEMKQNGVS 503
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y LI + V E GML+ ++ EG + +
Sbjct: 504 CNDYTYNVLINGICMVDRV---------CEVDGMLKS----------FMSEGFIPTMM-- 542
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+I+NGF K +A VY+Q+ +G P +TY S I+ YCR
Sbjct: 543 --------------TYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCR 588
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
A K+ +++++G +VAY++++ + + G + A+ L+ + G PN +
Sbjct: 589 TGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVV 648
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
YNSL+ + +++V K ++ M + + D +YTT+I +++ ++ Y+E
Sbjct: 649 YNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMM 708
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA-LRDAGLQ 590
G + D + + I+ KLL++M+ + + +Y+ +N LRD LQ
Sbjct: 709 AKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQ 768
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 179/423 (42%), Gaps = 6/423 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P L L+++ L+ ++W V L E+ LPD T + L+ +A K + A L
Sbjct: 365 PSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG-LPDVFTYNNLIHWHCQAHKLREALNL 423
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G + ++ +NS + GY K + +Y +M G + Y +M Y
Sbjct: 424 FDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIA 483
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
D + AL E K + ++ Y +L + + R E + +G +
Sbjct: 484 KKDFDNAYALLDEMKQNGVSCNDYT---YNVLINGICMVDRVCEVDGMLKSFMSEGFIPT 540
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y S+I F + A ++++ EKG+ + + Y G + L ++
Sbjct: 541 MMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLN 600
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
++ L+ A++NGF + A+++ L+ G P V Y S+I Y +
Sbjct: 601 DVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLN 660
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ + K + M + G Y++++ + K G + A+ L ++M AKG P+ + +
Sbjct: 661 MMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFT 720
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+L R+ ++ +KL +EM R V P+ Y +I+ Y R + + ++E +N
Sbjct: 721 ALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEM-LN 779
Query: 534 GGV 536
G+
Sbjct: 780 MGI 782
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 187/439 (42%), Gaps = 52/439 (11%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR--KLDSTPFSTHMYKIL 265
Y M + G+V D ++ + ++ ALF+E + R ++D+ F M L
Sbjct: 144 TYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACL 203
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
K G +A++ F +M I D +YA I + + + A + +E +E G
Sbjct: 204 -----KEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGF 258
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+V + ++ G +E+ L V + M++A K+ ++ ++ G+ R+ A+
Sbjct: 259 DTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALN 318
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV------------------------ 421
++++ + G +P +V Y +I ++ + KA ++
Sbjct: 319 LFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLL 378
Query: 422 -----------FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
F EM G V Y++++ + + ++R+A+ L +MK G +P++
Sbjct: 379 NDRRWKDAVCLFEEMADSGLPD-VFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSIN 437
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YNSL+ + + + + KL+ EM P+ V+Y T++ Y ++FD +E
Sbjct: 438 TYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEM 497
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL- 589
+ NG + +++ + ++ E+ +L+ SEG Y+S +N AG+
Sbjct: 498 KQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMM 557
Query: 590 --------QMQAQWLQQNF 600
QM+ + L N
Sbjct: 558 GSAFTVYQQMREKGLPPNI 576
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/510 (20%), Positives = 201/510 (39%), Gaps = 73/510 (14%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYST 205
V+PD + + L+ R K A L G + F++ M K M+
Sbjct: 152 GVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDA 211
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ ++++M A I D Y + A K+GD + + E K D+ F+ Y+ +
Sbjct: 212 VRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFT---YRTM 268
Query: 266 CDSLGKSGRAFEALK-----------------------------------FFRDMKEKGI 290
D L K+GR EAL+ F++ + GI
Sbjct: 269 VDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGI 328
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEE--------------KGMLRD----PEVC 332
+ +Y LI + + A EL ++ KG+L D VC
Sbjct: 329 VPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVC 388
Query: 333 L----------------KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
L L+ + + + + L++ + MK A +K S +++ G+ K
Sbjct: 389 LFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCK 448
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ AVK+Y ++ +G P VTY +++ Y + A + EM+Q G
Sbjct: 449 KGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYT 508
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y+ ++ R+ + ++ ++G P + YNS+++ +A + ++++M
Sbjct: 509 YNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMR 568
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ + P+ ++YT+ I Y R DM +K N+ R G D ++ F + +
Sbjct: 569 EKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMS 628
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
++LL + +G + +Y+S + ++
Sbjct: 629 HALQLLVILLKDGLAPNTVVYNSLITGYKN 658
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/221 (15%), Positives = 92/221 (41%)
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
AA Y ++++G +P + ++ R + A +F+EM+ +G+ + +++
Sbjct: 140 AATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALM 199
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ K G DA+ L +M +P+ +Y + + + + ++ +EM+
Sbjct: 200 SACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFD 259
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
+Y T++ + + ++ +E R G +D +A ++ + ++ + L
Sbjct: 260 TCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNL 319
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
++ +G + +Y + G+ +A L + G
Sbjct: 320 FKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTG 360
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 194/462 (41%), Gaps = 20/462 (4%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAY----DYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
D+ + +F+ G+ K+ ++ +L Y DY + K +IR K D
Sbjct: 259 DSYCYATFIEGLCKNNRS-DLGYAVLQDYRTRNAHV-----HKYAYTAVIRGFCNETKLD 312
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAM 193
S+ + + ++PD + LV +R F A + + I+ G + + F+ +
Sbjct: 313 EAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCIL 372
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
+++ + ++E+ K +G+ +D Y + +A K+G + + E KS +LD
Sbjct: 373 HCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLD 432
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
Y L + G+ EA F++M+E+G D Y L F A
Sbjct: 433 V---DMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEA 489
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+L E +G+ + ++ G VE+ + +K ++IS I A+VNG
Sbjct: 490 MDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNG 549
Query: 374 F------SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+ K A + ++ P +V Y+ I A C A +F
Sbjct: 550 YCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIH 609
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
GF V Y+ M+ Y KT + +A L MK +G P+ Y +++ + + LR+
Sbjct: 610 TGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLRE 669
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
+L+K+M+ R + PD ++YT +I + ++ + YNE
Sbjct: 670 AHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNE 711
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/477 (20%), Positives = 202/477 (42%), Gaps = 10/477 (2%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
T ++I+ L + W+++V + ++ K V D++ + + + + + +LQ +
Sbjct: 227 TYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDY 286
Query: 179 IT-DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
T + + A+ + + G+ V+ +M+ G+V D YC ++ Y +
Sbjct: 287 RTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNF 346
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
+K A++ SR + + + ++ + L + GRA E + F + KE G+ D Y
Sbjct: 347 DKALAVYKSMISRGIKT---NCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAY 403
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
L + + +V A + E + + D + L+ Y +G + + + M+
Sbjct: 404 NILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEE 463
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
K + GF + R + A+ + + SQG P T+ II C +
Sbjct: 464 RGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEE 523
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMV------AMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
AE+ F ++ + + V Y+++V A+ K+ +++A L+ M +P+ +
Sbjct: 524 AEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVM 583
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y+ + N+ L+ TPD V+YT +I+ Y + + + + +
Sbjct: 584 YSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMK 643
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G D IM+ + K++ + E +L +DMK G K D Y + L ++G
Sbjct: 644 ERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSG 700
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 202/473 (42%), Gaps = 52/473 (10%)
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA-NTLLQ----VFITDGEIALL 187
++ + ++ED ++N + V +CV F A + LLQ V I +L
Sbjct: 141 FEGVNDVNEDHYLFNAF------NGFVKACVSQNMFVEAIDFLLQTRKNVVILPN---IL 191
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+FN + K + ++ + KS G++ + Y +++A K GD E V +F E
Sbjct: 192 SFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEM 251
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
K +D ++ Y + L K+ R+ +D + + Y ++I F +
Sbjct: 252 KEAGVDD---DSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNE 308
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
T++ AE +F E E++G++ D V +Y
Sbjct: 309 TKLDEAESVFLEMEKQGLVPD-------VYVY---------------------------- 333
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
CA+V+G+ R + A+ VY+ +IS+G V ++ I++ + + +F E ++
Sbjct: 334 CALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKE 393
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G AY+ + K G++ DA+ ++ ++K+ + ++ Y +L++ + +
Sbjct: 394 SGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIE 453
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+ L+KEME R PD V+Y + + + R R + N G + I++
Sbjct: 454 AQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIE 513
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
++EE + +K E ++ +Y + +N +A L ++ L++ F
Sbjct: 514 GLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAF 566
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 109/267 (40%), Gaps = 35/267 (13%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++N K A+ ++ + S G I + TY +I A C+ + +VF EM++ G
Sbjct: 196 LINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAG 255
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
D Y++ + K R ++ + + + + Y +++ L + E
Sbjct: 256 VDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAE 315
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDM----------------CVKF------- 526
++ EME++ + PD Y ++ Y +R FD CV F
Sbjct: 316 SVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCL 375
Query: 527 ------------YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ EF+ +G IDR I+ KL ++++ V +L ++KS +D
Sbjct: 376 DEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDM 435
Query: 575 RLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ Y + +N G ++AQ L + E
Sbjct: 436 KHYTTLINGYFLQGKPIEAQSLFKEME 462
>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Brachypodium distachyon]
Length = 663
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 168/384 (43%), Gaps = 15/384 (3%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----CKSRKLDSTPFSTHMYKIL 265
++KS G+ L Y ++ Y + G + V F E C+ +D + + K
Sbjct: 148 RVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNC 207
Query: 266 CDSLGKSGRAFEALKFFRDMK-EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
C F+ ++ + DM KG P Y+ I + ++L +EL + ++ G
Sbjct: 208 C---------FDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLG 258
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
D C + ++ + L +VE M+ +V+G + + A+
Sbjct: 259 CSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAI 318
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
++E+++ + P + ++I C+ +A ++ M + V Y+++++ +
Sbjct: 319 GLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGF 378
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ G I A +++ M+ GCEP++ YN L++ + + + EKL ++ME V PD+
Sbjct: 379 WRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDR 438
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
SY ++ + + D F ++ GG D I++ F K +++ ++L ++
Sbjct: 439 YSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKE 498
Query: 565 MKSEGTKLDERLYHSAMNALRDAG 588
M +G + D Y + +N L G
Sbjct: 499 MGYKGMQADAVTYGTLINGLFSVG 522
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 111/509 (21%), Positives = 200/509 (39%), Gaps = 91/509 (17%)
Query: 167 KFKIANTLLQVFITDGEIALLA-----------------FNSAMGGYNKLHMYYSTILVY 209
+F IA L+ + DG ALL+ + + GY + + S I +
Sbjct: 123 QFAIA-YLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETF 181
Query: 210 EKMKSAGI------------VLDSGCYCQIMEAYYKIG-----------DSEKVAALFLE 246
++M +G VL C ++E YY + S ++AL
Sbjct: 182 DEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISAL--- 238
Query: 247 CKSRKLDST-PFSTHMYKILCDS-----------LGKSGRAFEALKFFRDMKEKGILEDP 294
C+S +++ M K+ C L K R +AL+ M+ KG D
Sbjct: 239 CQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDV 298
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
Y +++ + A L++E ++ + D C L+ + V++ ++
Sbjct: 299 VTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASR 358
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
M +++S CI A+++GF + A K+ + + GC P VTY ++N YC I +
Sbjct: 359 MLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGM 418
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
KAEK+ +M+ G + +Y+ ++ KT ++ A V+ G + N
Sbjct: 419 MEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNI 478
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA------YNRAREF-------- 520
L+D + K ++ +L+KEM + + D V+Y T+I+ YN A E
Sbjct: 479 LIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQ 538
Query: 521 -DMCVKFYN----------EFRMNGGVI----------DRAIAGIMVGVFSKLSQIEELV 559
D V YN F+ + D ++ K S+ E +
Sbjct: 539 IDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEAL 598
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAG 588
L +DM++ G + D + ++ L D G
Sbjct: 599 NLFKDMRTRGVEPDTLTFKYLISGLLDEG 627
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 141/322 (43%), Gaps = 14/322 (4%)
Query: 241 AALFLECKSRKLDST------------PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
A +F CK+ K+D S +Y L ++G +A K M+
Sbjct: 338 ALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTN 397
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G D Y L+ + +I ++ AE+L ++ E G+ D +L+ + ++K
Sbjct: 398 GCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKA 457
Query: 349 LDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
V D +SC I ++ F K + +A+++++++ +G VTY ++IN
Sbjct: 458 FAFVSDHMEVG-GFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLIN 516
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+ Y+ AE++F +M D V Y+ M+ K G + A + + M K P
Sbjct: 517 GLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSP 576
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
+ +N+L+ G+ + L+K+M R V PD +++ +IS + + + +
Sbjct: 577 DTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVW 636
Query: 528 NEFRMNGGVIDRAIAGIMVGVF 549
NG ++DR ++ ++ V
Sbjct: 637 EYMMENGIILDREVSERLISVL 658
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 153/366 (41%), Gaps = 45/366 (12%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARK----FKI 170
P+ T + ++ L +KK+ + L E+ ++ PD +C L+ + K F++
Sbjct: 296 PDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFEL 355
Query: 171 ANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
A+ +L + D E+++ +N+ + G+ + + M++ G D Y ++
Sbjct: 356 ASRMLTL---DIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNH 412
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y IG EK L + ++ ++ +S Y L L K+ + +A F D E G
Sbjct: 413 YCTIGMMEKAEKLIRKMETSGVNPDRYS---YNQLLKGLCKTHQLDKAFAFVSDHMEVGG 469
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
D LI +F +VK A ELFKE KGM D + G
Sbjct: 470 FCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADA----------VTYG------- 512
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
++NG Y A +++EQ+++ P Y +++ C
Sbjct: 513 ------------------TLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLC 554
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
++ + +A+ +F M QK V +++++ GK R +A+ L M+ +G EP+
Sbjct: 555 KVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTL 614
Query: 471 IYNSLM 476
+ L+
Sbjct: 615 TFKYLI 620
>gi|357125724|ref|XP_003564540.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Brachypodium distachyon]
Length = 652
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 177/384 (46%), Gaps = 19/384 (4%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y ++ A + G + L LE + R + + FS Y L +L ++G AL F
Sbjct: 121 YNLLLRAASRAGQLRLASGLLLEMRHRGVAADAFS---YSTLLAALTRAGHLDHALTFLP 177
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
M+ + D ++++LI + A LF G+ D + + Y +
Sbjct: 178 LMEADAVSPDLVLFSNLIHLALRGGDAPRALALFSRLRAAGIRPDLKAYNAAIAAYCKSD 237
Query: 344 LVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCI-PGQVT 401
L+ ++ A D S I+ ++R + AAV ++ + + + P
Sbjct: 238 LLRDAKRLLLHDIPADGVAPDAESYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSV 297
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM- 460
+ ++NAY ++ L +A+++F M++ G VV Y++M+ +YG G +A+ L M
Sbjct: 298 FNIVLNAYGQLDLAREADRLFWSMRRTGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMC 357
Query: 461 ------KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+PNV YN+++ +HG++ + L ++M+ + P+ V+Y+T++S +
Sbjct: 358 SSASDGNGSSVKPNVVTYNTIISIHGKSLEDEKAGSLVRDMQANGIQPNAVTYSTILSIW 417
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK--SEGTKL 572
+A + D K + + +G ID + MV + + + + +LL+++K +EG
Sbjct: 418 VKAGKLDRAAKLFEKLLESGTEIDPVLYQTMVVAYERAGLVSQAKRLLRELKDPAEGIPT 477
Query: 573 DERLYHSAMNALRDAGLQMQAQWL 596
+ +A++ L +AG +A WL
Sbjct: 478 E-----TAISILANAGRVEEAAWL 496
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 171/398 (42%), Gaps = 14/398 (3%)
Query: 186 LLAFNSAMGGYNKLHMYY-STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
L A+N+A+ Y K + + L+ + + G+ D+ Y I+ A + G +AA+
Sbjct: 223 LKAYNAAIAAYCKSDLLRDAKRLLLHDIPADGVAPDAESYSPILAALARRG--RHLAAVS 280
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
L R + ++ I+ ++ G+ A EA + F M+ G+ Y +++ +
Sbjct: 281 LFSHMRAVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSMRRTGVPPSVVTYNTMLRVY 340
Query: 305 ASITEVKLAEELF-----KEAEEKGMLRDPEVCLKLVLMYIEEGLVE--KTLDVVESMKN 357
A LF ++ G P V ++ I +E K +V M+
Sbjct: 341 GDAGLFGEAVHLFGLMCSSASDGNGSSVKPNVVTYNTIISIHGKSLEDEKAGSLVRDMQA 400
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
++ + I++ + K A K++E+L+ G V Y +++ AY R L S+
Sbjct: 401 NGIQPNAVTYSTILSIWVKAGKLDRAAKLFEKLLESGTEIDPVLYQTMVVAYERAGLVSQ 460
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A+++ E++ + + +++ GR+ +A WL + G + ++ ++MD
Sbjct: 461 AKRLLRELKDPAEG---IPTETAISILANAGRVEEAAWLFRRAVNTGEVRDPSVHRAMMD 517
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ + + R V +++ EM + PD + T ++AY + +EFD Y R G V
Sbjct: 518 LFAKNRRHRSVVEVFDEMRKLGHLPDSETIATAMNAYGKLKEFDKAAMLYRASREEGCVF 577
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+ M+ + E L L+ ++ S +D+R
Sbjct: 578 SDRVHFQMLSLLGAQKDFEALESLVSEL-SHDPSIDKR 614
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/400 (20%), Positives = 159/400 (39%), Gaps = 11/400 (2%)
Query: 139 LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGGY 196
L D V PDA + S ++A+ R + A +L + L FN + Y
Sbjct: 246 LLHDIPADGVAPDAESYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIVLNAY 305
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF-LECKSR---KL 252
+L + ++ M+ G+ Y ++ Y G + LF L C S
Sbjct: 306 GQLDLAREADRLFWSMRRTGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMCSSASDGNG 365
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
S + Y + GKS +A RDM+ GI + Y++++ + ++
Sbjct: 366 SSVKPNVVTYNTIISIHGKSLEDEKAGSLVRDMQANGIQPNAVTYSTILSIWVKAGKLDR 425
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV- 371
A +LF++ E G DP + +V+ Y GLV + ++ +K+ I + +I+
Sbjct: 426 AAKLFEKLLESGTEIDPVLYQTMVVAYERAGLVSQAKRLLRELKDPAEGIPTETAISILA 485
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
N W ++ + ++ G + + ++++ + + + +VF EM++ G
Sbjct: 486 NAGRVEEAAW----LFRRAVNTGEVRDPSVHRAMMDLFAKNRRHRSVVEVFDEMRKLGHL 541
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
++ + YGK A L + +GC + ++ ++ + G K+ +E L
Sbjct: 542 PDSETIATAMNAYGKLKEFDKAAMLYRASREEGCVFSDRVHFQMLSLLGAQKDFEALESL 601
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
E+ + Y Y RA +FD + ++ R
Sbjct: 602 VSELSHDPSIDKRELYLVAAGVYERAYKFDEAAQIISQIR 641
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 55/115 (47%)
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
V Y ++ A R A + +EM+ +G +YS+++A + G + A+ +
Sbjct: 119 VPYNLLLRAASRAGQLRLASGLLLEMRHRGVAADAFSYSTLLAALTRAGHLDHALTFLPL 178
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
M+A P++ ++++L+ + R + + L+ + + PD +Y I+AY
Sbjct: 179 MEADAVSPDLVLFSNLIHLALRGGDAPRALALFSRLRAAGIRPDLKAYNAAIAAY 233
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 115/531 (21%), Positives = 227/531 (42%), Gaps = 20/531 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + + G+ K + +E AYD + EA+ P T +I L + + ++ +
Sbjct: 28 PDVVTYGALIDGLGKQRRVKE-AYDLFEEARA-KGCHPTVVTYNTMIDGLCKCGRIENAL 85
Query: 138 SLSEDFKI-YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG----EIALLAFNSA 192
+L +D I + P T S L+ R + LL+ G + +A
Sbjct: 86 TLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNA 145
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK----VAALFLECK 248
+ G + +S + E+M + G + + I++ K G+ E V +F+
Sbjct: 146 LLGQGRSKEAFSLL---EQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIES 202
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
D F++ + D L K R +A F+ E+G + Y++LI + +
Sbjct: 203 GLSPDVITFNSVL-----DGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMA 257
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
++ A +L + E G + +V ++ G +E + V+ M++A
Sbjct: 258 KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYN 317
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++GF KR+ AV + +++ G P VTY ++ + CR + +A ++ M +
Sbjct: 318 TLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR 377
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM-KAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G + YSS+V K GR+ +A+ KM + + P+V Y++L+D +A + +
Sbjct: 378 GCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDE 437
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+ + M R PD V+++ +I+ A D ++ + G V D +V
Sbjct: 438 AYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVD 497
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+ S+++E L Q M+S+G D + ++ L + A+ +Q
Sbjct: 498 RLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQD 548
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 176/416 (42%), Gaps = 42/416 (10%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
+I L +S+K D ++L + + PD T L+ + R+ K A L + G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ T++ Y M +D C C +E + D +
Sbjct: 61 -------------------CHPTVVTYNTM------IDGLCKCGRIENALTLYDDMAIHF 95
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
F + Y L D L + + K +M +G + Y +L+
Sbjct: 96 GFRP-----------TVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVN 144
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPE-VCLKLVLMYI-EEGLVEKTLDVVESMKNAKL 360
+ K A L ++ G PE + L++ + +EG +E VV+ M +
Sbjct: 145 ALLGQGRSKEAFSLLEQMAANGC--PPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIES 202
Query: 361 KIS-DCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+S D I+ ++++G K + A V+++ + +GC P VTY+++I+ ++A +A
Sbjct: 203 GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEA 262
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
++ +M + G V YS++V K GR+ DA+ ++ +M+ GC P+ YN+L+D
Sbjct: 263 LQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDG 322
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+ + LR+ L +EM P V+YTT+ R+ FD V+ + G
Sbjct: 323 FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 378
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/498 (20%), Positives = 218/498 (43%), Gaps = 21/498 (4%)
Query: 91 LKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLP 150
LKDPQT + + + + F+ T ++ L+++ D I ++ E P
Sbjct: 103 LKDPQTAIVFFVWAGDRG----FKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAP 158
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVY 209
D++T ++ S + + A T+L G + + + + K + ++
Sbjct: 159 DSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF 218
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+ S D+ Y I+ + + D + E RK+ F+ Y IL D L
Sbjct: 219 RNIPSP----DAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFT---YNILIDGL 271
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
K+ + +A + +M ++G+ D + S++ + + A L E+ P
Sbjct: 272 CKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNC--RP 329
Query: 330 EVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV-NGFSKRRGYWAAVKV 386
C L+ ++ V++ D+V+ ++ + D ++ +I+ +G KR A ++
Sbjct: 330 SCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF-VPDVVTYSILADGLCKRGRIDEAFEL 388
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+++ +GC P VTY ++I+ C+ + KA ++ + GF VV Y+ +V K
Sbjct: 389 VKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCK 448
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
GR+ A+ +V M +GC P+V Y +LM+ R + + ++KEM + T D ++
Sbjct: 449 EGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALA 508
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y ++++ Y ++ K + R G + ++ + K +++E+ + +DM
Sbjct: 509 YVSLVNGYCKSSRTKEAQKVVDGIR---GTPYIDVYNALMDGYCKEGRLDEIPNVFEDMA 565
Query: 567 SEGTKLDERLYHSAMNAL 584
G + + Y+ M+ L
Sbjct: 566 CRGCVPNIKTYNIVMDGL 583
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 118/554 (21%), Positives = 223/554 (40%), Gaps = 41/554 (7%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PDA +++ +HG + + A ++ E + + P+ T +LI L ++ K D
Sbjct: 224 PDAIAYNAIIHGHCRKNDC-DGALEFLKEMNER-KVAPDVFTYNILIDGLCKASKTDKAS 281
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-DGEIALLAFNSAMGGY 196
+ + V PD T + ++ +A KF+ A++LL V + + +N+ + G
Sbjct: 282 EMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGL 341
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE---------- 246
K + ++ S+G V D Y + + K G ++ L E
Sbjct: 342 CKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNL 401
Query: 247 ----------CKSRK----------LDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRD 284
CK+ K L S+ F + Y I+ D L K GR +ALK
Sbjct: 402 VTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEG 461
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M ++G Y +L+ V A +FKE K D + LV Y +
Sbjct: 462 MLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSR 521
Query: 345 VEKTLDVVESMKNAK-LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
++ VV+ ++ + + + A+++G+ K V+E + +GC+P TY
Sbjct: 522 TKEAQKVVDGIRGTPYIDVYN----ALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYN 577
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
+++ C+ +A M G VV+Y+ ++ K + ++A ++ +M
Sbjct: 578 IVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA 637
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
G P+ YN+LM + + + K M + V PD V+Y T+IS ++
Sbjct: 638 GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDA 697
Query: 524 VKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ +E NG V+ ++ K +++ + L+ M G + + Y+ ++
Sbjct: 698 YELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFID 757
Query: 583 ALRDAGLQMQAQWL 596
L G +A L
Sbjct: 758 RLCKEGRLDEASSL 771
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 169/398 (42%), Gaps = 11/398 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++E+M AG DS Y ++++ ++ +K + + K R +Y IL
Sbjct: 147 MFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKP---EVSVYTILTR 203
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ K+GR +AL+ FR++ D Y ++I + A E KE E+ +
Sbjct: 204 AFCKTGRLKDALEIFRNIPSP----DAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAP 259
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ + +K +++ M + + +I++G K + A +
Sbjct: 260 DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 319
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + C P TY ++I+ C+ +A+ + E GF VV YS + K
Sbjct: 320 AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKR 379
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GRI +A LV +M KGC PN+ YN+L+D +A + +L + + PD V+Y
Sbjct: 380 GRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTY 439
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA--GIMVGVFSKLSQIEELVKLLQDM 565
T ++ + D +K E + G I +M G+ + +++E + ++M
Sbjct: 440 TIIVDGLCKEGRLDKALKMV-EGMLKRGCTPSVITYTALMEGL-CRTGRVDEAHHIFKEM 497
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
S+ D Y S +N + +AQ + GT
Sbjct: 498 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT 535
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 102/544 (18%), Positives = 219/544 (40%), Gaps = 43/544 (7%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
EL ++ + P+ +++ + G+ K +T++ AY+ E+ F P+ T +++
Sbjct: 387 ELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEK-AYELL-ESLVSSGFVPDVVTYTIIVD 444
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-DGEI 184
L + + D + + E P T + L+ R + A+ + + ++ D
Sbjct: 445 GLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTA 504
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
LA+ S + GY K V + ++ + Y +M+ Y K G +++ +F
Sbjct: 505 DALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI---DVYNALMDGYCKEGRLDEIPNVF 561
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ R P + Y I+ D L K G+ EA F M G + D Y +I
Sbjct: 562 EDMACRG--CVP-NIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 618
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
++ K A ++ + + G+ D L+ + +E + + ++++M A + +
Sbjct: 619 FKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDN 678
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ-VTYASIINAYCRIALYSKAEKVFI 423
+++G S+ A ++ +++ GC+ TY +II+ C+ +A +
Sbjct: 679 VTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMD 738
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA--------------------- 462
M G + V Y+ + K GR+ +A L+++M
Sbjct: 739 HMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLD 798
Query: 463 ------------KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
KG +N L+D + K L + L M +R +P ++Y V
Sbjct: 799 RASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMV 858
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
I+ + + D + ++E + G V +++ + +E +++L++M S
Sbjct: 859 ITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDC 918
Query: 571 KLDE 574
++D+
Sbjct: 919 EIDD 922
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 133/337 (39%), Gaps = 41/337 (12%)
Query: 62 FPTIELNRDSHHQTAVPDAKKFDSFLHGMLK--DPQTQELAYDYYNEAKKLPEFRPEKST 119
FP +E H VPD ++ + G+ K P+ D +A +P P+ T
Sbjct: 593 FPFLE---SMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAG-IP---PDAVT 645
Query: 120 LKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
L+ + +++D V + ++ V PD T + L++ + + A L+ +
Sbjct: 646 YNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 705
Query: 180 TDGEI--ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
+G + A +N+ + K +L+ + M G+ ++ Y ++ K G
Sbjct: 706 RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRL 765
Query: 238 EKVAALFLE-----------------CKSRKLDSTP-------------FSTHMYKILCD 267
++ ++L E CK+ +LD ++H + +L D
Sbjct: 766 DEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLID 825
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ K+ R EAL M ++G Y +I + +V A ELF E +G++
Sbjct: 826 AFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVA 885
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
L+ +G ++ L V+E M ++ +I D
Sbjct: 886 SSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDD 922
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 147/324 (45%)
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
+ ++ K G EA + + + G+ D Y SLI + +V A ++F KG
Sbjct: 220 MVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG 279
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
R+ ++ E G +++ + + + M+ + I++ +
Sbjct: 280 CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGM 339
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
++ ++ + C P TY +++A C+ ++ ++ EM +KG VV Y++++ Y
Sbjct: 340 DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGY 399
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ GRI A+ ++ M++ C PN YN L+ + K++ + L +M K+TP
Sbjct: 400 CEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSL 459
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
V+Y ++I +A FD K + + NG V D+ + + K ++EE L
Sbjct: 460 VTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNS 519
Query: 565 MKSEGTKLDERLYHSAMNALRDAG 588
+K +G K +E +Y + ++ AG
Sbjct: 520 LKEKGIKANEVMYTALIDGHCKAG 543
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/484 (21%), Positives = 204/484 (42%), Gaps = 43/484 (8%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTI 206
++P+ +T + +V + + AN + ++F + S + GY + + S
Sbjct: 210 IVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAY 269
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
V+ M + G + Y I+ + G ++ +LF K R+ D P + Y ++
Sbjct: 270 KVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFK--KMREDDCYP-TVRTYTVII 326
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE--ELFKEAEEKG 324
+L + R E + F +M+E+ +P+++ + A E KL E + E EKG
Sbjct: 327 HALFGNDRNLEGMDLFNEMRERSC--EPNVHTYTVMVDAMCKERKLDESRRILNEMMEKG 384
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
++ L+ Y EEG +E L+++ M++ + ++ ++ GFSKR+ A+
Sbjct: 385 LVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAM 444
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK------------------VFIE-- 424
+ +++ P VTY S+I+ C+ + A K VFI+
Sbjct: 445 TLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTL 504
Query: 425 ---------------MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+++KG V Y++++ + K G+I +A+ L+ +M ++ C PN
Sbjct: 505 CKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNS 564
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
YNSL+ + +++ + + M + V P +YT +I R +FD + +N+
Sbjct: 565 STYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQ 624
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
G D + + ++E ++ M G D Y ++A GL
Sbjct: 625 MVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGL 684
Query: 590 QMQA 593
A
Sbjct: 685 AYDA 688
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 169/400 (42%), Gaps = 6/400 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + + +H + + + E D +NE ++ P T +++ + + +K D
Sbjct: 317 PTVRTYTVIIHALFGNDRNLE-GMDLFNEMRER-SCEPNVHTYTVMVDAMCKERKLDESR 374
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ + ++P T + L+ + + A +L + ++ +N + G+
Sbjct: 375 RILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGF 434
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+K + + + KM + + Y ++ K G + L K L
Sbjct: 435 SKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQ 494
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
++ Y + D+L KS R EA F +KEKGI + +Y +LI ++ A L
Sbjct: 495 WT---YSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISL 551
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ + L + L+ +EG V++ L +VE+M +K + ++ +
Sbjct: 552 LERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLR 611
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A +V+ Q++S G P TY + I+ YC +AE + M + G +
Sbjct: 612 EGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLT 671
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
Y+ +++ Y + G DA ++ +M GC+P+ I+N+L+
Sbjct: 672 YTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 120/566 (21%), Positives = 224/566 (39%), Gaps = 35/566 (6%)
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
++ Q PD F + ++ K + ++ A + + +KL P T LI L +
Sbjct: 303 ETMRQGVSPDVYLFSTAINAFCKGGKVED-AIQLFFDMEKL-GVSPNVVTYNNLIHGLCK 360
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLA 188
D E V T S L+ ++ KF AN++L+ + G +
Sbjct: 361 HGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVV 420
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N+ + GY K+ + + M S GI +S I++ + KIG E+ + E
Sbjct: 421 YNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEML 480
Query: 249 SRKLDSTP--FSTHMYKI------------------------------LCDSLGKSGRAF 276
SR P F+T ++ + L L K G+
Sbjct: 481 SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHS 540
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+A++ + + EKG + +LI ++ A L K+ E+G + D L+
Sbjct: 541 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 600
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+EG VE+ + M ++ +++G + AV ++ + S+ +
Sbjct: 601 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLV 660
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P TY +I+ YC+ + EK+F E+ + + V Y++++ Y + G +A L
Sbjct: 661 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 720
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
M++KG P Y+SL+ + + L EM + + P+ V YT +I Y +
Sbjct: 721 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCK 780
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ D V E ++ +M+ +SK ++ KLL +M +G D
Sbjct: 781 LGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVT 840
Query: 577 YHSAMNALRDAGLQMQAQWLQQNFEG 602
Y+ N G + + L ++ G
Sbjct: 841 YNVLTNGFCKEGKIEEGKLLAEDGVG 866
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 207/486 (42%), Gaps = 11/486 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T L+ LV++ + + + E + V PD + S + + + K + A
Sbjct: 277 PTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDA--- 332
Query: 175 LQVFITDGEIAL----LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+Q+F ++ + + +N+ + G K EKM G+ Y ++
Sbjct: 333 IQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLING 392
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K+ + ++ E + TP + +Y L D K G +AL+ DM KGI
Sbjct: 393 LMKLEKFNEANSVLKETLEKGF--TP-NEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGI 449
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
+ S+I F I +++ AE + +E +G +P ++ E L
Sbjct: 450 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 509
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ M ++ +D + +V G K + AV+++ +L+ +G VT ++I+ C
Sbjct: 510 FLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLC 569
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ +A ++ +M ++GF + Y+++++ K G++ + L +M +G EP+ +
Sbjct: 570 KTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 629
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YN L+ R L + LW E + R + P+ +Y +I Y +A + + K + E
Sbjct: 630 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 689
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
++ + ++ + + E KL DM+S+G Y S ++ + + G
Sbjct: 690 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 749
Query: 591 MQAQWL 596
A+ L
Sbjct: 750 EDAKCL 755
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/474 (21%), Positives = 199/474 (41%), Gaps = 10/474 (2%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P + LI + + + D + P++ T + ++ + + + A
Sbjct: 414 FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAE 473
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+L+ ++ G I AF + + + S + +M + + G ++
Sbjct: 474 CILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGL 533
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K G L+ + + +T+ L L K+G EA++ + M E+G +
Sbjct: 534 CKEGKHSDAVELWFRLLEKGFGANLVTTNA---LIHGLCKTGNMQEAVRLLKKMLERGFV 590
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
D Y +LI +V+ +L E ++G+ D L+ G +++ +++
Sbjct: 591 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 650
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
K+ L + +++G+ K K++ +L++Q V Y ++I AYCR
Sbjct: 651 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCR 710
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+A K+ +M+ KG YSS++ GR+ DA L+ +M+ +G PNV
Sbjct: 711 NGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 770
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y +L+ + + + +V + +EM + P+K++YT +I Y+++ + K +E
Sbjct: 771 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 830
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY--HSAMNA 583
G V D ++ F K +IEE L +D G + L+ H A A
Sbjct: 831 GKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAED----GVGFNSPLFLIHEAFRA 880
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/360 (19%), Positives = 142/360 (39%), Gaps = 74/360 (20%)
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA----------------- 358
+F+ KG+ + C L+ ++ +EK+ V E+M+
Sbjct: 266 VFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCK 325
Query: 359 KLKISDCISC-----------------AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
K+ D I +++G K A + E+++ G +T
Sbjct: 326 GGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLIT 385
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y+ +IN ++ +++A V E +KGF V Y++++ Y K G + DA+ + M
Sbjct: 386 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 445
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
+KG PN NS++ + + Q E + +EM R + + ++TT+I F+
Sbjct: 446 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 505
Query: 522 MCVKFYNE-----FRMNGGVIDRAIAGI------------------------------MV 546
++F E R N G++ + G+ ++
Sbjct: 506 SALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI 565
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL-----RDAGLQMQAQWLQQNFE 601
K ++E V+LL+ M G LD+ Y++ ++ + G +++ + ++Q E
Sbjct: 566 HGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE 625
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 191/423 (45%), Gaps = 6/423 (1%)
Query: 115 PEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
P S +K L LV+ K + ++VSLS+ ++ + D + + L+ R
Sbjct: 87 PLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGF 146
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
++L I G E ++ F++ + G+ I +++ M + G + Y I++
Sbjct: 147 SVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGL 206
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
++G + +V L + K+ +Y + D L K EA+ F MK GIL
Sbjct: 207 CRVGKTTEVIKLL---EHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGIL 263
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
Y SLI ++ K A L E + ++ D L+ + +EG V + +
Sbjct: 264 PTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVI 323
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+++M ++ ++NG+ R A KV+E +IS+G +P +++ ++N YC+
Sbjct: 324 LKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCK 383
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+A+++F EM +G V+Y+++++ + R +A L M + G PN+
Sbjct: 384 AKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVT 443
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y+ L+D + L Q L++ ME + PD V+Y +I + +F + + E
Sbjct: 444 YSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELS 503
Query: 532 MNG 534
+ G
Sbjct: 504 VKG 506
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 160/357 (44%), Gaps = 10/357 (2%)
Query: 150 PDAHTCSRLVASCVRARKF-KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILV 208
P+ H+ S ++ R K ++ L + + E ++ +N+ + K + + +
Sbjct: 194 PNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHI 253
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILC 266
+ KMK GI+ Y ++ +G ++ L E K + D FS +L
Sbjct: 254 FCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFS-----VLI 308
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
D + K G EA + M E G+ D + Y +L+ + EV A ++F+ KG +
Sbjct: 309 DIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRM 368
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVK 385
D LV Y + +++ + + M + L I D +S +++G + R A +
Sbjct: 369 PDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGL-IPDTVSYNTLISGLCQARRPLEAEE 427
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+++ + S G P VTY+ +++ + +A +F M+ G +V Y+ M+
Sbjct: 428 LFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMC 487
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
K G+ +DA L A++ KG +PN W+ +D + L + K +++ME+ +P
Sbjct: 488 KYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 199/460 (43%), Gaps = 38/460 (8%)
Query: 164 RARKFKIANTLLQVFI----TDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVL 219
+ R F+ N L F T+ +++ F ++ Y + + + ++M+ AGI
Sbjct: 65 KNRTFRNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISH 124
Query: 220 DS-------GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKS 272
D C+C++ Y K+ L LE + FST + + GK
Sbjct: 125 DVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLE-----PNVITFSTLINGFCIE--GKI 177
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV-KLAEELFKEAEEKGMLRDPEV 331
GRA E K + SI +C TEV KL E + K + +P+V
Sbjct: 178 GRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHM------KVVGCEPDV 231
Query: 332 CL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYE 388
+ +V ++ LV + + + MK + + ++++G + G W A +
Sbjct: 232 VIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGL-RNLGRWKEAFGLLN 290
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ +P V ++ +I+ C+ S+A + M + G + V Y++++ Y
Sbjct: 291 EMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRM 350
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ +A + M +KG P+V+ ++ L++ + +AK + + ++L+ EM R + PD VSY
Sbjct: 351 EVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYN 410
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
T+IS +AR + + + NG + I++ SK +++ + L + M++
Sbjct: 411 TLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENS 470
Query: 569 GTKLDERLYHSAMNAL---------RDAGLQMQAQWLQQN 599
G K D Y+ ++ + R+ ++ + LQ N
Sbjct: 471 GLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPN 510
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 128/328 (39%), Gaps = 37/328 (11%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P + S +HG+ + +E A+ NE K P+ +LI + + +
Sbjct: 263 LPTVVTYTSLIHGLRNLGRWKE-AFGLLNEMKG-GNIMPDLVAFSVLIDIMCKEGEVSEA 320
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIA-LLAFNSAMG 194
+ + V PD T + L+ C+R + A + +V I+ G + + +F+ +
Sbjct: 321 RVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVE-ARKVFEVMISKGRMPDVFSFSILVN 379
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
GY K ++++M G++ D+ Y ++ + + LF + S +
Sbjct: 380 GYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHS---NG 436
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
P + Y IL D L K G +A+ FR M+ G+ D Y +I + K A
Sbjct: 437 YPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDAR 496
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
ELF E KG+ + VC + + GL+++ M+ DC
Sbjct: 497 ELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEK-----DDCSP------- 544
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTY 402
+QGCI G+ TY
Sbjct: 545 -----------------AQGCINGRATY 555
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 185/406 (45%), Gaps = 14/406 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVL-PDAHTCSRLVASCVRARKFKIANT 173
P +L L+ ++++K + ++VSL P T S + S + +A +
Sbjct: 53 PSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFS 112
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
++ + G + + M G + + +Y+ S G D CY ++
Sbjct: 113 VMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLC 172
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTH--MYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K+G + L RK++ + MY ++ D L K G EA +M KGI
Sbjct: 173 KMGKTRDAIELL-----RKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGI 227
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKT 348
D Y SLI F + + A L E K +R P+V +L+ + G+V +
Sbjct: 228 CIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVR-PDVYTFNILVDALCKLGMVAEA 286
Query: 349 LDVVESMKNAKLKISDCISC-AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+V M L+ D +SC A++NG+ R A +V+++++ +G +P ++Y+++IN
Sbjct: 287 RNVFGLMIKRGLE-PDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLIN 345
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
YC++ + +A ++ EM Q+ V Y+ ++ K+GR+ LV M+A G P
Sbjct: 346 GYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAP 405
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
++ YN L+D + + + L + L++ + ++P+ +Y +I
Sbjct: 406 DLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDG 451
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 138/328 (42%), Gaps = 2/328 (0%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+ +N + G K + + +M GI +D Y ++ + G + L
Sbjct: 196 LIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLN 255
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E ++ D P + + IL D+L K G EA F M ++G+ D +L+ +
Sbjct: 256 EMVMKE-DVRP-DVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWC 313
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ A+E+F E+G L + L+ Y + +V++ L ++ M L
Sbjct: 314 LRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTV 373
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
+++G SK + E + + G P +TY +++ Y + KA +F +
Sbjct: 374 TYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHI 433
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
G + Y+ ++ K GR++ A + + KGC PN+ YN +++ R L
Sbjct: 434 VDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLL 493
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ E L EM P+ V++ ++ A
Sbjct: 494 DEAEALLLEMVDDGFPPNAVTFDPLVRA 521
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 157/350 (44%), Gaps = 3/350 (0%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P T ++ + SL K+ R + F+ + GI D + LI F + LA
Sbjct: 55 PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFS 114
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F ++G D L+ G ++KTL + + ++ ++NG
Sbjct: 115 VFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLC 174
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A ++ +L P V Y +IIN+ C+ L A V+ EM KG VV
Sbjct: 175 KAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 234
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK---LW 492
Y++++ + G++++A L+ +MK K P+V+ ++ L+D G+ + V++ L+
Sbjct: 235 TYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLF 294
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+EM+ + + PD V+Y ++I + + + E + +G D I++ K
Sbjct: 295 EEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKG 354
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
++E + Q + +G L+ Y+ +N L AGL +A L+ EG
Sbjct: 355 GRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEG 404
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 188/430 (43%), Gaps = 50/430 (11%)
Query: 114 RPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRAR---K 167
RP T ++ LV++K++ +++SL + F+ + PD T S L+ C +A
Sbjct: 53 RPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLA 112
Query: 168 FKI-ANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQ 226
F + AN L + F D + N+ + G T+ ++++ + G LD Y
Sbjct: 113 FSVFANILKRGFHPDA----ITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGT 168
Query: 227 IMEAYYKIGDSEKVAALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
++ K G+++ VA L LE S K D MY + +SL K+ +A + +
Sbjct: 169 LINGLCKAGETKAVARLLRKLEGHSVKPDVV-----MYNTIINSLCKNKLLGDACDVYSE 223
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M KGI D Y +LI F + ++K A L E + K + +P+V VL
Sbjct: 224 MIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNI--NPDVYTFSVL------- 274
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+D + K K K+ D A+ ++E++ + IP VTY S
Sbjct: 275 ----IDALG--KEGKKKMVD-----------------EAMSLFEEMKHKNMIPDIVTYNS 311
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I+ C+ +A + EM++ G V +Y+ ++ K GR+ A + KG
Sbjct: 312 LIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKG 371
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
C NVW YN +++ +A + L +ME + P+ +++ T+I A + E D
Sbjct: 372 CHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAE 431
Query: 525 KFYNEFRMNG 534
K E G
Sbjct: 432 KILREMIARG 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 107/230 (46%), Gaps = 10/230 (4%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY +M GI D Y ++ + +G ++ +L E K + ++ ++ + +L D
Sbjct: 220 VYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYT---FSVLID 276
Query: 268 SLGKSGR---AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
+LGK G+ EA+ F +MK K ++ D Y SLI ++ A L KE +E G
Sbjct: 277 ALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHG 336
Query: 325 MLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
+ P+V +L+ + G +E + + + ++ ++NG K +
Sbjct: 337 I--QPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGE 394
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
A+ + ++ +GC+P +T+ +II A KAEK+ EM +G K
Sbjct: 395 AMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGLLK 444
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 21/261 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ ++ + K+ + A D Y+E + P+ T LI K
Sbjct: 196 PDVVMYNTIINSLCKNKLLGD-ACDVYSEMI-VKGISPDVVTYTTLIHGFCIMGKMKEAF 253
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF--------ITDGEIALLAF 189
SL + K+ N+ PD +T S L+ + + K K+ + + +F I D ++ +
Sbjct: 254 SLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPD----IVTY 309
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LEC 247
NS + G K H I + ++MK GI D Y +++ K G E F L
Sbjct: 310 NSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLV 369
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
K L+ P Y ++ + L K+G EA+ M+ KG + + + ++IC+ +
Sbjct: 370 KGCHLNVWP-----YNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEK 424
Query: 308 TEVKLAEELFKEAEEKGMLRD 328
E AE++ +E +G+L++
Sbjct: 425 DENDKAEKILREMIARGLLKE 445
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 214/493 (43%), Gaps = 17/493 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ LHG K + E A ++ A K F P+ T LI ++ K D
Sbjct: 118 PDVVTYNTLLHGFCKVGKLDE-ALKIFDGAVK-RGFVPDVVTYNALINGFCKADKLDEAQ 175
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGG 195
+ + +++PD T + LV + + A L I D + ++ +++ + G
Sbjct: 176 RILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML----IVDKGFSPNVITYSTLISG 231
Query: 196 Y-NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
+L S + EKM G D Y ++ + + LF + +
Sbjct: 232 LCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEP 291
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
Y IL D L K R EA + F + + G+ D Y I V+ A
Sbjct: 292 ---EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDAL 348
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
+ K+ +EKG + D ++ +E V++ +V+ S AK + IS +
Sbjct: 349 LMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEA-EVLLSGMEAKGCSPNAISFNTLICG 407
Query: 375 SKRRGYWA-AVKVYEQLISQGCIPGQVTYASIINAYCRI---ALYSKAEKVFIEMQQKGF 430
R G W A+ +++++ +G P VTY +++ C+ +A +F M +KG
Sbjct: 408 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 467
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
VV YS+++ GK G++ DA L+ M+AKGC PNV+ YNSL+ + + +
Sbjct: 468 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALE 527
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L+ M + PD ++Y T+ISA + D + ++ G V + ++
Sbjct: 528 LFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLC 587
Query: 551 KLSQIEELVKLLQ 563
+++++E +KLLQ
Sbjct: 588 AVARVDEALKLLQ 600
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/496 (21%), Positives = 207/496 (41%), Gaps = 45/496 (9%)
Query: 144 KIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYY 203
+IY+ PDA+T L+ S +++ K + A+ ++ + G + FN + G +
Sbjct: 10 RIYS--PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIG 67
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM-- 261
V++ M+ G + Y ++ G AL+ ++ +S +
Sbjct: 68 DAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALY-----ERMIKAGYSPDVVT 122
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L K G+ EALK F ++G + D Y +LI F ++ A+ + +
Sbjct: 123 YNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV 182
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVE--------------------------KTLDVVESM 355
+ ++ D LV + G V+ + L +ES
Sbjct: 183 SESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESA 242
Query: 356 KN--AKLKISDCIS-----CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+ K+ ++ C A+++G ++ +G A+K++ ++ QG P TY +I+
Sbjct: 243 RQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDG 302
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+ ++A ++F + + G + + Y+ + K GR+ DA+ ++ M KGC P+
Sbjct: 303 LLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPD 362
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
V +N++++ + K + + E L ME + +P+ +S+ T+I RA ++ + +
Sbjct: 363 VVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFK 422
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQ---IEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
E G I+V K Q I+E + L M +G D Y + ++ L
Sbjct: 423 EMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLG 482
Query: 586 DAGLQMQAQWLQQNFE 601
AG A+ L E
Sbjct: 483 KAGKLDDARRLLGAME 498
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 173/369 (46%), Gaps = 3/369 (0%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
++K+ + G LD Y ++ K+G+++ AAL L ++ P MY + D
Sbjct: 286 HDKVIAMGFHLDQVSYGTLINGLCKVGETK--AALELLRRNDGKLVQP-DVVMYNTIIDG 342
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
+ K +A + + K I D Y +LI F + ++K A +LF + K ++ D
Sbjct: 343 MCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPD 402
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
LV + ++G +++ +V+ M +K ++++G+ A ++
Sbjct: 403 VYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFN 462
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+ +G +Y +IN +C+I + +A K+F EM K V+ YSS++ K+G
Sbjct: 463 TMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSG 522
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
RI A+ LV +M +G +P++ YNS++D + ++ + L +++ + + PD +YT
Sbjct: 523 RISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYT 582
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
++ ++ + + K + + + G +D +M+ F +E + LL M+
Sbjct: 583 ILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEEN 642
Query: 569 GTKLDERLY 577
G D + Y
Sbjct: 643 GCIPDAKTY 651
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 150/341 (43%), Gaps = 2/341 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L + L K G AL+ R K + D +Y ++I V A +L+ E
Sbjct: 301 YGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKV 360
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNGFSKRRGY 380
K + D L+ + G ++ +D+ M + + I D + +I V+GF K
Sbjct: 361 SKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNI-IPDVYTFSILVDGFCKDGNI 419
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A V ++ Q P VTY+S+++ YC + +KAE +F M +G V +Y+ M
Sbjct: 420 KEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIM 479
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ + K + +AM L +M K P+V Y+SL+D ++ + +L EM R
Sbjct: 480 INGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQ 539
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
PD ++Y +++ A + D + + + G D I+V + ++E+ K
Sbjct: 540 QPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARK 599
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ +D+ +G LD Y + D GL +A L E
Sbjct: 600 VFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKME 640
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 165/400 (41%), Gaps = 20/400 (5%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+EL R + + PD +++ + GM KD + A+D Y+E K P+ T LI
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVND-AFDLYSE-KVSKRIFPDVFTYNALI 375
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-E 183
K + L N++PD +T S LV + K A +L + + +
Sbjct: 376 SGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIK 435
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ ++S M GY ++ ++ M G+ + Y ++ + KI ++ L
Sbjct: 436 PDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKL 495
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
F E +++ + Y L D L KSGR AL+ +M +G D Y S++ +
Sbjct: 496 FKEMHHKQIFPDVIT---YSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
V A L + + +G+ D LV + G +E V E + +
Sbjct: 553 LCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLD 612
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK-----A 418
++ GF + + A+ + ++ GCIP TY II ++L+ K A
Sbjct: 613 VYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIII-----LSLFEKDENDMA 667
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVA--MYGKTGRIRDAMWL 456
EK+ EM +G V +VA + +T R A+W+
Sbjct: 668 EKLLREMIMRGL--LVALTDDLVASILVRRTWCARLALWV 705
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 112/253 (44%), Gaps = 35/253 (13%)
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA----------------- 413
+ GF + A+ ++++I+ G QV+Y ++IN C++
Sbjct: 270 IKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLV 329
Query: 414 -----LY-------------SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
+Y + A ++ E K V Y+++++ + G+++DA+
Sbjct: 330 QPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAID 389
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L KM +K P+V+ ++ L+D + N+++ + + M ++ + PD V+Y++++ Y
Sbjct: 390 LFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYC 449
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
E + +N G + IM+ F K+ ++E +KL ++M + D
Sbjct: 450 LVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVI 509
Query: 576 LYHSAMNALRDAG 588
Y S ++ L +G
Sbjct: 510 TYSSLIDGLCKSG 522
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 86/195 (44%)
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+++ G P +T + I +C +A ++ GF V+Y +++ K G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ A+ L+ + K +P+V +YN+++D + K++ L+ E +++ PD +Y
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+IS + + + +N+ + D I+V F K I+E +L M +
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432
Query: 569 GTKLDERLYHSAMNA 583
K D Y S M+
Sbjct: 433 SIKPDVVTYSSLMDG 447
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/495 (20%), Positives = 203/495 (41%), Gaps = 58/495 (11%)
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL---- 186
+ D + + D +YN L+ V K K+ T V+ GE +
Sbjct: 138 NQLDPLFGIQADTVVYN---------HLLNVLVEGSKMKLLET---VYSEMGERGIKPDV 185
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD---SEKVAAL 243
+ FN+ M + H + +L+ E+M S+G+ D + +M+ + + G + +V A
Sbjct: 186 VTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKAR 245
Query: 244 FLE-----------------CK-SRKLDSTPFSTH-----------MYKILCDSLGKSGR 274
LE CK R D+ + Y + L ++G
Sbjct: 246 MLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGH 305
Query: 275 AFEALKFFRDMKEKGILEDPSIYA-----SLICSFASITEVKLAEELFKEAEEKGMLRDP 329
ALK M ++G DP ++ + +C + E A+ + + E+G L D
Sbjct: 306 VGHALKVMDVMVQEG--HDPDVFTYNIVVNCLCKNGQLEE---AKGILNQMVERGCLPDI 360
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
L++ +E+ LD+ + L ++N K A++++E+
Sbjct: 361 TTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEE 420
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ S GC P +VTY ++I+ C + KA + EM+ G + V Y++++ K R
Sbjct: 421 MKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMR 480
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
I +A + +M +G N +N+L+D + K + +L +M + P+ ++Y +
Sbjct: 481 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNS 540
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+++ Y + + NG +D G ++ K + + +KLL+ M+ +G
Sbjct: 541 ILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 600
Query: 570 TKLDERLYHSAMNAL 584
+ + Y+ + +L
Sbjct: 601 MRATPKAYNPVIQSL 615
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 135/300 (45%)
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI D +Y L+ +++KL E ++ E E+G+ D L+ V
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+ ++E M ++ + + ++ GF + AA++V +++ GC P +VT +IN
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
YC++ A + GF+ + Y++ V + G + A+ ++ M +G +P+
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
V+ YN +++ + L + + + +M R PD ++ T+I A + +
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ + G D I++ K+ + ++L ++MKS G DE Y++ ++ L G
Sbjct: 385 QVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLG 444
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 108/478 (22%), Positives = 181/478 (37%), Gaps = 78/478 (16%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV-----------AS 161
+P+ T L++ L ++ + + V + E+ V PD T + L+ A
Sbjct: 181 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAAL 240
Query: 162 CVRARKFKIANTLLQVFIT---DGEIALLAFNSAMG--------GYNKLHMYYSTIL--- 207
V+AR ++ + +V + +G L A+G G+ + Y+T +
Sbjct: 241 RVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGL 300
Query: 208 -----------VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DS 254
V + M G D Y ++ K G E+ + + R D
Sbjct: 301 CQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDI 360
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
T F+T L +L R EAL R + KG+ D + LI + + + +LA
Sbjct: 361 TTFNT-----LIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLAL 415
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
LF+E + G D L+ G + K LD+++ M++A S I++G
Sbjct: 416 RLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGL 475
Query: 375 SKRRGYWAAVKVYE-----------------------------------QLISQGCIPGQ 399
K+ A +V++ Q+IS+G P
Sbjct: 476 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNN 535
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
+TY SI+ YC+ KA + M GF+ VV Y +++ K GR + A+ L+
Sbjct: 536 ITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRG 595
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
M+ KG YN ++ R N R L++EM PD +Y V R
Sbjct: 596 MRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRG 653
>gi|255661202|gb|ACU25770.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 426
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 167/338 (49%), Gaps = 6/338 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G +AL + + M+E + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSRAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRR 378
+ G+ D ++ ++ + L + +V M+ A + + D +S C ++ + + +
Sbjct: 70 LKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGV-MPDTVSYCTLLTMYVENQ 128
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ A+ ++ ++ C T +I+ Y ++ + +A+K+F M++ G + VV+Y+
Sbjct: 129 KFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVSYN 188
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQEMQDR 248
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 249 GIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAYERAGLVAHA 308
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LLQ++K + D +A++ L AG +A W+
Sbjct: 309 KRLLQELK----RPDNIPRDTAIHILAGAGRIEEATWV 342
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 144/349 (41%), Gaps = 33/349 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K A+ F +K GI D Y S+I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSRAISIFSRLKRSGIAPDLVAYNSMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G++ D L+ MY+E + L + M+ + D +C I+
Sbjct: 98 ARALVSEMRTAGVMPDTVSYCTLLTMYVENQKFLEALSLFSEMREIQCSF-DLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMVIYGKTLEHEKANNLIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN------------------ 533
++++ + D+V Y T+I AY RA + E +
Sbjct: 277 FQKLRCSGIEIDQVLYQTMIVAYERAGLVAHAKRLLQELKRPDNIPRDTAIHILAGAGRI 336
Query: 534 -------------GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
G V D + M+ +FSK + +V++ M+ G
Sbjct: 337 EEATWVFRQAVEAGEVKDITVFERMINLFSKHKKYPNVVEVFDKMRGLG 385
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 190/424 (44%), Gaps = 14/424 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS----CVRARKFKI 170
P++ T LI + + +D +S + + V D S L+ C +R I
Sbjct: 7 PDRYTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSRAISI 66
Query: 171 ANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ L + I L+A+NS + + K ++ + +M++AG++ D+ YC ++
Sbjct: 67 FSRLKRSGIAPD---LVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLTM 123
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y + + + + AL L + R++ + F I+ D G+ G A EA K F M++ GI
Sbjct: 124 Y--VENQKFLEALSLFSEMREIQCS-FDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGI 180
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
+ Y +L+ + A LF+ + K + ++ ++++Y + EK +
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANN 240
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+++ M++ ++ + I++ + K A ++++L G QV Y ++I AY
Sbjct: 241 LIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAYE 300
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
R L + A+++ E+++ + + + + GRI +A W+ + G ++
Sbjct: 301 RAGLVAHAKRLLQELKRPD----NIPRDTAIHILAGAGRIEEATWVFRQAVEAGEVKDIT 356
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
++ ++++ + K V +++ +M P V++AY + EFD Y E
Sbjct: 357 VFERMINLFSKHKKYPNVVEVFDKMRGLGYFPHSNVIALVLNAYGKLHEFDKANSVYMEM 416
Query: 531 RMNG 534
+ G
Sbjct: 417 QDEG 420
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 147/362 (40%), Gaps = 28/362 (7%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ +I ++K + +L + + V+PD + L+ V +KF A
Sbjct: 77 PDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLTMYVENQKFLEA--- 133
Query: 175 LQVFITDGEIA----LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
L +F EI L N + Y +L M ++ M+ GI + Y ++
Sbjct: 134 LSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVSYNTLLRV 193
Query: 231 YYKIGDSE---KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
Y GD+E + LF + + ++ + Y + GK+ +A ++M++
Sbjct: 194 Y---GDAELFGEAIHLFRLMQRKNIEQNVVT---YNSMMVIYGKTLEHEKANNLIQEMQD 247
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
+GI + Y+++I + + ++ A LF++ G+ D + +++ Y GLV
Sbjct: 248 RGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAYERAGLVAH 307
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+++ +K D + W V+ Q + G + + +IN
Sbjct: 308 AKRLLQELKRPDNIPRDTAIHILAGAGRIEEATW----VFRQAVEAGEVKDITVFERMIN 363
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM----YGKTGRIRDAMWLVAKMKAK 463
+ + Y +VF +M+ G+ +S+++A+ YGK A + +M+ +
Sbjct: 364 LFSKHKKYPNVVEVFDKMRGLGY----FPHSNVIALVLNAYGKLHEFDKANSVYMEMQDE 419
Query: 464 GC 465
GC
Sbjct: 420 GC 421
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 178/375 (47%), Gaps = 3/375 (0%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
++M G+ +++ CY +++AY + D ++VA + ++ ++ T Y IL D L
Sbjct: 91 DEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPT---VGTYTILVDGL 147
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
+ + F +MK K + D Y+S+I ++ V+ A E+F E G+ +
Sbjct: 148 SAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNE 207
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
L+ + + G +E +V M+ + I+ + +++G+ ++ A+++
Sbjct: 208 HTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMI 267
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ G TY ++ R +A+ + M +KG V+Y+++++++ G
Sbjct: 268 MEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 327
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ +A L +M G EP++ YN +MD + + ++R+ E+ EME++ + PD SY
Sbjct: 328 MVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAA 387
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
++ + + D+ ++ + E + G + ++ +K + EE +L +M +G
Sbjct: 388 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 447
Query: 570 TKLDERLYHSAMNAL 584
D+ LY + + +L
Sbjct: 448 LTPDDALYSALVGSL 462
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 110/227 (48%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+V+G+ K A ++ +++ G + Y S+++AY R + ++ M+ +G
Sbjct: 73 VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 132
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ V Y+ +V I + +MK+K +V+ Y+S+++ + RA N+R+
Sbjct: 133 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 192
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+++ E + P++ +Y +I+ + + + + + ++ G I++ + M+ +
Sbjct: 193 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 252
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + +++ +++ M+ G +LD Y++ LR A +A+ L
Sbjct: 253 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNL 299
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 35/181 (19%)
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR---------------- 481
S +V Y K+GR+ A L+ +M G + N YNSL+D + R
Sbjct: 71 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 130
Query: 482 -------------------AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
A+++ +VE +++EM+ + ++ D Y++VI+AY RA
Sbjct: 131 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 190
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ ++E NG + G ++ F K+ Q+E L+ DM+ G +++ ++++ ++
Sbjct: 191 ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMID 250
Query: 583 A 583
Sbjct: 251 G 251
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/518 (19%), Positives = 230/518 (44%), Gaps = 7/518 (1%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR-YLVQSKKWDSIV 137
D + + + LH + + + E A + + E K+ P +++ Y + W IV
Sbjct: 186 DVRAYTTVLHALSHEGR-YERALELFAELKR-EGVAPTHVMYNVMLDVYGRMGRSWPQIV 243
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
++ E+ + V PD T S ++A+C R A + + G + ++ +N+ + +
Sbjct: 244 AMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVF 303
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K Y + V ++M+ +G D+ Y ++ +Y + G E+ A S+ +
Sbjct: 304 GKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNA 363
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
F+ Y + + G +G+ EAL F MK+ G + + Y ++ + + E+
Sbjct: 364 FT---YNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEM 420
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E G + ++ + + G+ V+E MK+ +++ +++ + +
Sbjct: 421 LGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGR 480
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A K+Y+++ + G P TY ++++ R ++ A+ + +M+ +GF ++
Sbjct: 481 CGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMS 540
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
YS ++ + K G + ++ P+ I +L+ + + + L +E+ ++E+
Sbjct: 541 YSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVM 600
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
R PD V + +++S Y + + + ++ + G D M+ +++K ++
Sbjct: 601 ARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESW 660
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
E K+L+ +K+ K D Y++ MN GL +AQ
Sbjct: 661 EAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQ 698
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 162/361 (44%), Gaps = 6/361 (1%)
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF-E 277
LD Y ++ A G E+ LF E K + T MY ++ D G+ GR++ +
Sbjct: 185 LDVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHV---MYNVMLDVYGRMGRSWPQ 241
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
+ +M+ G+ D +++I + V A F++ + +G + L+
Sbjct: 242 IVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQ 301
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYEQLISQGCI 396
++ + G + L V++ M+ + K D ++ + G R G++ A K + ++S+G +
Sbjct: 302 VFGKAGNYMEALRVLKEMEESGCK-PDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGIL 360
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P TY +I+ AY +A +F M++ GF V Y+ ++ M GK R + +
Sbjct: 361 PNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEM 420
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ +M GC PN +N+++ + G+ V ++ + M+ V + ++ T+ISAY R
Sbjct: 421 LGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGR 480
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
K Y+E G ++ V S+ ++ MK+EG K ++
Sbjct: 481 CGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMS 540
Query: 577 Y 577
Y
Sbjct: 541 Y 541
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 145/361 (40%), Gaps = 1/361 (0%)
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
G + V L E S Y + +L GR AL+ F ++K +G+
Sbjct: 163 GQHDAVCDLLDEMLPLPPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKREGVAPTH 222
Query: 295 SIYASLICSFASITEV-KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+Y ++ + + + +E G+ D ++ +GLV++ + E
Sbjct: 223 VMYNVMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFE 282
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+K+ A++ F K Y A++V +++ GC P VTY + +Y R
Sbjct: 283 DLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAG 342
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
Y +A K M KG Y++++ YG G++ +A+ L MK G P V YN
Sbjct: 343 FYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYN 402
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
++ M G+ + ++ EM R TP++V++ T+++ + + +
Sbjct: 403 LILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSC 462
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G + R ++ + + K+ +M + G Y++ ++ L G A
Sbjct: 463 GVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAA 522
Query: 594 Q 594
Q
Sbjct: 523 Q 523
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/455 (19%), Positives = 190/455 (41%), Gaps = 21/455 (4%)
Query: 80 AKKFDSFLH-GMLKDPQTQELAYDYYNEAKKLPE------------FRPEKSTLKLLIRY 126
AK D+ + G+L + T Y A K+ E F P +T L++
Sbjct: 348 AKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGM 407
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIA 185
L + +++ ++ + + P+ T + ++A C + +L+ + G E+
Sbjct: 408 LGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELC 467
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
FN+ + Y + + +Y++M +AG Y ++ + GD ++
Sbjct: 468 RDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIIN 527
Query: 246 ECKSRKLDSTPFSTHMYKIL--CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
+ K+ S Y +L C + G + EA++ +++ E + I +L+ S
Sbjct: 528 KMKNEGFKPNDMS---YSLLLQCHAKGGNAAGIEAIE--KEVYEGTVFPSWVILRTLVIS 582
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
++ E F+E +G D + ++ MY + G+ K ++ +S+K L
Sbjct: 583 NFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPD 642
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
++++ ++K W A K+ ++L + P V+Y +++N +C+ L +A+++
Sbjct: 643 LITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILS 702
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM G CVV Y ++V Y +A +V+ M + P Y ++D + +AK
Sbjct: 703 EMIADGVRPCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLSPMELTYRRVVDSYCKAK 762
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+ E+ D+ +T+ + A+
Sbjct: 763 RFDEARGFLYEIAETDRNSDQKLLSTLTARVESAQ 797
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 179/421 (42%), Gaps = 12/421 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T ++ + K D ++L + K +P +T + ++ + +F + +
Sbjct: 361 PNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEM 420
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L G + +N+ + K M V E+MKS G+ L + ++ AY +
Sbjct: 421 LGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGR 480
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G ++ E + TP T Y L L + G A MK +G +
Sbjct: 481 CGSRANAFKMYDEMTAAGF--TPCLT-TYNALLSVLSRQGDWTAAQSIINKMKNEGFKPN 537
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE----EGLVEKTL 349
Y+ L+ A E + KE E + + LV+ + EG+
Sbjct: 538 DMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQ 597
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+V+ L I + ++++ ++K Y A ++++ + G P +TY S+++ Y
Sbjct: 598 EVMARGHKPDLVIFN----SMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMY 653
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ +AEK+ ++ VV+Y++++ + K G I++A ++++M A G P V
Sbjct: 654 AKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCV 713
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
Y++L+ + + + ++ M +R ++P +++Y V+ +Y +A+ FD F E
Sbjct: 714 VTYHTLVGGYASREMFSEAREVVSYMIQRNLSPMELTYRRVVDSYCKAKRFDEARGFLYE 773
Query: 530 F 530
Sbjct: 774 I 774
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 191/449 (42%), Gaps = 48/449 (10%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++AF + M G + + + ++M G+ + Y I++ K+GD+ V+AL L
Sbjct: 177 VIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT--VSALNL 234
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
K ++ + +Y + D L K GR +A F +M+EKGI + Y +I F
Sbjct: 235 LRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFC 294
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
S A+ L +E E+ M D L+ ++EG + ++ M + +
Sbjct: 295 SSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTI 354
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++++GFSK+ AA +++ + ++GC P +T++ +I+ YC K+ EM
Sbjct: 355 TYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEM 414
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD---MHGRA 482
++G + Y++++ + + G + A+ L+ +M + G PNV N+L+D +G+
Sbjct: 415 SRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKL 474
Query: 483 KN-------------------------------------------LRQVEKLWKEMERRK 499
K+ + E+L++EM R
Sbjct: 475 KDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRG 534
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ PD ++Y +VI + D + ++ G D ++ + K+ ++ + +
Sbjct: 535 LVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGL 594
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAG 588
++ +M G + Y + ++ G
Sbjct: 595 EVFCEMGRRGIVANAITYRTLIHGFCQVG 623
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/452 (19%), Positives = 190/452 (42%), Gaps = 60/452 (13%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + + + G+ KD + Q A + ++E ++ P T +I S +W
Sbjct: 246 PNVVIYSAIIDGLWKDGR-QTDAQNLFSEMQE-KGISPNLFTYNCMINGFCSSGRWSEAQ 303
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
L + + PD T S L+ + V+ KF A L + G I + +NS + G+
Sbjct: 304 RLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGF 363
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+K + + ++ M + G D + +++ Y C ++++D
Sbjct: 364 SKQNRLDAAERMFYLMATKGCSPDVITFSILIDGY---------------CGAKRVD--- 405
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ +K +M +G++ + Y +LI F + + A +L
Sbjct: 406 --------------------DGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDL 445
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS------------- 363
+E G+ + C L+ G ++ L++ + M+ +K+ +
Sbjct: 446 LQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQ 505
Query: 364 --DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ + C ++N + A ++YE++ +G +P +TY S+I+ C+ + +A ++
Sbjct: 506 TYNILICGLIN----EGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQM 561
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M KGF VV +++++ Y K GR+ D + + +M +G N Y +L+ +
Sbjct: 562 FDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQ 621
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
N+ +++EM V PD ++ +++
Sbjct: 622 VGNINGALDIFQEMISSGVYPDTITIRNMLTG 653
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 165/388 (42%), Gaps = 14/388 (3%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++ +M+ GI + Y ++ + G + L E RK+ + + +L +
Sbjct: 270 LFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVT---FSVLIN 326
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+L K G+ FEA + + +M +GI+ + Y S+I F+ + AE +F KG
Sbjct: 327 ALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSP 386
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ Y V+ + ++ M L + +++GF + AA+ +
Sbjct: 387 DVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLL 446
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD-----------KCVVA 436
+++IS G P VT ++++ C A ++F MQ+ D V
Sbjct: 447 QEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQT 506
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y+ ++ G+ +A L +M +G P+ YNS++D + L + +++ M
Sbjct: 507 YNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMG 566
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ +PD V++TT+I+ Y + ++ + E G V + ++ F ++ I
Sbjct: 567 SKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNIN 626
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + Q+M S G D + + L
Sbjct: 627 GALDIFQEMISSGVYPDTITIRNMLTGL 654
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/379 (19%), Positives = 162/379 (42%), Gaps = 13/379 (3%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
+C+++ ++ + V +L + + R++ P + + + IL + AL F
Sbjct: 79 FCKLLGVVVRMERPDVVISLHRKMEMRRI---PCNIYSFTILIKCFCSCSKLPFALSTFG 135
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIE 341
+ + G +++L+ V A F + + P V LM
Sbjct: 136 KITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQ------ICKPNVIAFTTLMNGLCR 189
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI-PGQV 400
EG V + + +++ M L+ + IV+G K +A+ + ++ I P V
Sbjct: 190 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVV 249
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
Y++II+ + + A+ +F EMQ+KG + Y+ M+ + +GR +A L+ +M
Sbjct: 250 IYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREM 309
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ P+V ++ L++ + + E+L+ EM R + P+ ++Y ++I +++
Sbjct: 310 FERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRL 369
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
D + + G D I++ + ++++ +KLL +M G + Y +
Sbjct: 370 DAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTL 429
Query: 581 MNALRDAG-LQMQAQWLQQ 598
++ G L LQ+
Sbjct: 430 IHGFCQLGNLNAALDLLQE 448
>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 589
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 111/496 (22%), Positives = 210/496 (42%), Gaps = 6/496 (1%)
Query: 91 LKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLP 150
++D +++E A ++++ + EK KL +V+ K + + +SL + + P
Sbjct: 46 MRDLKSEEAALSFFHKMVVMNPLPREKDFTKLF-GIIVKMKHYATTISLIKHIYSLGIKP 104
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVY 209
D +T + ++ ++L V G + ++ F + + G
Sbjct: 105 DVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFA 164
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-CKSRKLDSTPFSTHMYKILCDS 268
+ ++ G +S Y I+ K GD+ A L+LE K R D Y + DS
Sbjct: 165 DSLEDMGHQSNSYTYGAIINGLCKAGDTSG-AILYLEKIKGRNCDLDVVIA--YSTIMDS 221
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L K G EAL F M KGI D Y SLI + K A L KG++ +
Sbjct: 222 LCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPN 281
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
+ LV + ++G++ + ++ M + ++ ++++G AVKV+E
Sbjct: 282 VQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFE 341
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+I +G +P VTY+S+I+ +C+ +KA + EM G + VV +S+++ + K G
Sbjct: 342 LMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAG 401
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ A L M PN+ ++D + + + L++EME+ + + V Y
Sbjct: 402 KPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYN 461
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
V+ + + + ++ G ID M+ K +++ LL M+
Sbjct: 462 IVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEEN 521
Query: 569 GTKLDERLYHSAMNAL 584
G +E Y+ + L
Sbjct: 522 GCLPNEFTYNVFVRGL 537
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 183/414 (44%), Gaps = 22/414 (5%)
Query: 169 KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
K + +L + + ++ + F + G K + I +M S G V D Y +++
Sbjct: 404 KAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIIC---EMMSKGFVPDDSTYSKVI 460
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
+ D+ KV FL + K + S + Y IL DS K+G +A +F +M
Sbjct: 461 GF---LCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRD 517
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
+ Y SLI ++ +V A +LF+ +G + L+ + + G ++K
Sbjct: 518 NCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKA 577
Query: 349 LDVVESMKNA----------KLKISDCIS------CAIVNGFSKRRGYWAAVKVYEQLIS 392
+ M+ KL +DC + A+V+G K A ++ + +
Sbjct: 578 CQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSV 637
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
GC P Q+ Y ++I+ +C+ A++VF++M ++G+ + YSS++ K R+
Sbjct: 638 NGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDL 697
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
+ +++KM C PNV IY ++D + + +L +ME P+ ++YT +I
Sbjct: 698 VLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMID 757
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+ + + + C++ Y + G + +++ ++E +LL +MK
Sbjct: 758 GFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMK 811
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 112/513 (21%), Positives = 210/513 (40%), Gaps = 68/513 (13%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ ST +I +L + K + L E+ K ++P +T + L+ S +A + A
Sbjct: 449 FVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQAR 508
Query: 173 TLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ D ++ + S + Y K + ++E M G + Y +++ +
Sbjct: 509 NWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGH 568
Query: 232 YKIGDSEKVAALFLECKSR----------KLDSTPFSTH---MYKILCDSLGKSGRAFEA 278
K G +K ++ + KLD T Y L D L K+ R EA
Sbjct: 569 CKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEA 628
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+ M G + +Y +LI F +++ A+E+F + E+G + +
Sbjct: 629 HELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPN---------L 679
Query: 339 YIEEGLV-----EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ 393
Y L+ EK LD+V +KV +++
Sbjct: 680 YTYSSLINSLFKEKRLDLV-------------------------------LKVLSKMLEN 708
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
C P V Y +I+ C++ +A ++ ++M++ G V+ Y++M+ +GK G+I
Sbjct: 709 SCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQC 768
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ L M +KGC PN Y L++ L + +L EM++ SY +I
Sbjct: 769 LELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEG 828
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT--K 571
+N REF + +E N V ++ I++ F K ++E + LL+++ S +
Sbjct: 829 FN--REFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAV 886
Query: 572 LDERLYHSAMNALR-----DAGLQMQAQWLQQN 599
++ LY S + +L D ++ A + +N
Sbjct: 887 ANKYLYTSLIESLSHASKVDKAFELYASMINKN 919
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/503 (19%), Positives = 211/503 (41%), Gaps = 41/503 (8%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
EF P+ ++ L ++ + + + + + + +P+ T L++ C+ +
Sbjct: 267 EFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRC 326
Query: 172 NTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAG---------IVLDS 221
+L + +T+G FNS + Y K Y +++KM G I + S
Sbjct: 327 KRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGS 386
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKS--RKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
C + + + +EK + L+ K++ + F+ + LC + GK +AFE +
Sbjct: 387 ICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFA----RCLCGA-GKFDKAFEII 441
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
+M KG + D S Y+ +I ++V+ A LF+E ++ G++ L+ +
Sbjct: 442 C---EMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSF 498
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ GL+++ + + M + ++++ + K R + A K++E ++ +G P
Sbjct: 499 CKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNV 558
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
VTY ++I+ +C+ KA +++ MQ SS + MY K
Sbjct: 559 VTYTALIDGHCKAGQIDKACQIYARMQGD-------IESSDIDMY-------------FK 598
Query: 460 MKAKGCE-PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+ CE PN+ Y +L+D +A + + +L M P+++ Y +I + +
Sbjct: 599 LDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTG 658
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ + + + + G + ++ K +++ ++K+L M + +Y
Sbjct: 659 KLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYT 718
Query: 579 SAMNALRDAGLQMQAQWLQQNFE 601
++ L G +A L E
Sbjct: 719 DMIDGLCKVGKTEEAYRLMLKME 741
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 131/329 (39%), Gaps = 12/329 (3%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
AL+ +K+ G P+ Y +LI F ++ A + +E G D
Sbjct: 189 ALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAY 248
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
+ G L ++E + + +V+G + + A+ + +++ S CIP
Sbjct: 249 SLCKAGRCGDALSLLEKEEFVPDTV---FYNRMVSGLCEASLFQEAMDILDRMRSISCIP 305
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
VTY +++ + +++ M +G ++S+V Y K+ A L
Sbjct: 306 NVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLF 365
Query: 458 AKMKAKGCEPNVWIYNSLM-------DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
KM GC+P +YN + ++ G + L EK + EM V +KV+ +
Sbjct: 366 KKMIKCGCQPGYLLYNIFIGSICSNEELPG-SDLLELAEKAYSEMLDLGVVLNKVNVSNF 424
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
A +FD + E G V D + ++G S++E+ L ++MK G
Sbjct: 425 ARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGI 484
Query: 571 KLDERLYHSAMNALRDAGLQMQAQ-WLQQ 598
Y +++ AGL QA+ W +
Sbjct: 485 VPSVYTYTILIDSFCKAGLIQQARNWFDE 513
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 202/476 (42%), Gaps = 12/476 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD S L+G + E A ++ ++ ++P+ T LI L K V
Sbjct: 149 PDIVTLSSLLNGYCHGKRISE-AVALVDQMVEMG-YKPDTVTFNTLIHGLFLHNKASEAV 206
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGG 195
+L + PD T +V + +A +LL+ + G+I ++ +N+ + G
Sbjct: 207 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK-MEKGKIEANVVIYNTIIDG 265
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K ++ KM++ GI D Y ++ G + L + RK++
Sbjct: 266 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPN 325
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLA 313
+ + L D+ K G+ EA K F +M ++ I DP+I Y SLI F + A
Sbjct: 326 VVT---FNSLIDAFAKEGKLIEAEKLFDEMIQRSI--DPNIVTYNSLINGFCMHDRLDEA 380
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+++F K L D L+ + + VE+ +++ M L + ++ G
Sbjct: 381 QQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 440
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+ A K++++++S G P +TY+ +++ C+ KA VF +Q+ +
Sbjct: 441 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPN 500
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ Y+ M+ K G++ D L + KG +PNV IY +++ R + + L++
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 560
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
EM+ PD Y T+I A R + + E R G V D + +++ +
Sbjct: 561 EMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 616
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/453 (21%), Positives = 198/453 (43%), Gaps = 9/453 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
PD T S L+ ++ A L+ + G + + FN+ + G + + +
Sbjct: 149 PDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVAL 208
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
++M + G D Y ++ K GD + +L + + K+++ + +Y + D
Sbjct: 209 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA---NVVIYNTIIDG 265
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L K +A F M+ KGI D Y SLI + A L + E+ + +
Sbjct: 266 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKI--N 323
Query: 329 PEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
P V L+ + +EG + + + + M + + +++NGF A ++
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ ++S+ C+P VTY ++I +C+ + ++F EM Q+G V Y++++ +
Sbjct: 384 FTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 443
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G A + KM + G P++ Y+ L+D + L + +++ +++ K+ P+ +
Sbjct: 444 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYT 503
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y +I +A + + + + G + I M+ F + EE L ++MK
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 563
Query: 567 SEGTKLDERLYHSAMNA-LRDAGLQMQAQWLQQ 598
+GT D Y++ + A LRD A+ +++
Sbjct: 564 EDGTLPDSGCYNTLIRARLRDGDKAASAELIKE 596
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/486 (21%), Positives = 210/486 (43%), Gaps = 44/486 (9%)
Query: 114 RPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
RP S ++ L+ + + K+D ++SL E + + + +T S L+ R + +A
Sbjct: 76 RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLA 135
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+L + G E ++ +S + GY + + ++M G D+ + ++
Sbjct: 136 LAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHG 195
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
+ + + AL +R F+ Y + + L K G AL + M++ I
Sbjct: 196 LFLHNKASEAVALIDRMVARGCQPDLFT---YGTVVNGLCKRGDIDLALSLLKKMEKGKI 252
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
+ IY ++I + A +LF + E KG+ D V Y
Sbjct: 253 EANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD-------VFTY----------- 294
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYEQLISQGCIPGQVTYASIINAY 409
+ ISC G W+ A ++ +I + P VT+ S+I+A+
Sbjct: 295 ------------NSLISCLC------NYGRWSDASRLLSDMIERKINPNVVTFNSLIDAF 336
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ +AEK+F EM Q+ D +V Y+S++ + R+ +A + M +K C P+V
Sbjct: 337 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 396
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
YN+L+ +AK + + +L++EM +R + + V+Y T+I +A + DM K + +
Sbjct: 397 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 456
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+G D I++ K ++E+ + + + ++ + + Y+ + + AG
Sbjct: 457 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAG- 515
Query: 590 QMQAQW 595
+++ W
Sbjct: 516 KVEDGW 521
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 161/388 (41%), Gaps = 42/388 (10%)
Query: 238 EKVAALFLE-CKSRKLDSTPFSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
+ ALF E KSR PF + + + L ++ K + + M+ GI +
Sbjct: 63 DDAVALFGEMVKSR-----PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
Y+ L+ F +++ LA + + + G D L+ Y + + + +V+ M
Sbjct: 118 TYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 177
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
K +++G AV + ++++++GC P TY +++N C+
Sbjct: 178 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 237
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
A + +M++ + VV Y++++ K + DA L KM+ KG +P+V+ YNSL
Sbjct: 238 DLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSL 297
Query: 476 M-----------------DMHGRAKN------------------LRQVEKLWKEMERRKV 500
+ DM R N L + EKL+ EM +R +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 357
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
P+ V+Y ++I+ + D + + + D ++ F K ++EE ++
Sbjct: 358 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGME 417
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAG 588
L ++M G + Y++ + L AG
Sbjct: 418 LFREMSQRGLVGNTVTYNTLIQGLFQAG 445
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 113/244 (46%)
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
E M+N + + ++N F +R A+ V +++ G P VT +S++N YC
Sbjct: 105 EQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 164
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
S+A + +M + G+ V +++++ + +A+ L+ +M A+GC+P+++ Y
Sbjct: 165 KRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 224
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
++++ + ++ L K+ME+ K+ + V Y T+I + + D +N+
Sbjct: 225 GTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMET 284
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
G D ++ + + +LL DM + ++S ++A G ++
Sbjct: 285 KGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIE 344
Query: 593 AQWL 596
A+ L
Sbjct: 345 AEKL 348
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 118/278 (42%), Gaps = 19/278 (6%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKL------PEFRPEKSTLKLLIRYLVQSK 131
P+ ++S ++G +D +EA+++ + P+ T LI+ ++K
Sbjct: 359 PNIVTYNSLINGFC--------MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAK 410
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFN 190
+ + + L + ++ + T + L+ +A +A + + ++DG ++ ++
Sbjct: 411 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 470
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ G K ++V+E ++ + + + Y ++E K G E LF S
Sbjct: 471 ILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFC---SL 527
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
L + +Y + + G EA FR+MKE G L D Y +LI + +
Sbjct: 528 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDK 587
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
+ EL KE G + D + +V+ + +G +EK+
Sbjct: 588 AASAELIKEMRSCGFVGDAST-ISMVINMLHDGRLEKS 624
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 192/434 (44%), Gaps = 6/434 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVY 209
P + + ++ RAR+ IA + F +G + FN+ MG Y + + +
Sbjct: 186 PASRAVAVVLGVLGRARQDSIAEEVFLRFAGEGA-TVQVFNAMMGVYARSGRFDDARQLL 244
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+ M GI D + ++ A K G AL L + R+ P Y L +
Sbjct: 245 DTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRP-DVITYNTLISAC 303
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
+S +A+ F DM D Y +++ + + AE LF+E EKG + D
Sbjct: 304 SQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDA 363
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
L+ + +EG V+K E + A K ++ +++ + K AV +Y++
Sbjct: 364 ITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDE 423
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ + GC P VTY +I++ ++ ++A KV +M G ++A+S+++ Y K GR
Sbjct: 424 MRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGR 483
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
DA M A G +P+ Y ++D+ R+ + ++ L+++M PD Y
Sbjct: 484 RADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQV 543
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
++ A A+E D C + E + ++ R GI+ + K + + KLL+ +G
Sbjct: 544 LLVAL--AKE-DKCEEI-EEVIQDMELLCRMNLGIISTMLIKARCVSQGAKLLKKACLQG 599
Query: 570 TKLDERLYHSAMNA 583
K D + S MNA
Sbjct: 600 YKPDIKSLRSIMNA 613
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 161/392 (41%), Gaps = 11/392 (2%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N+ + Y + +Y V++ M G + +M A G +++ + E +
Sbjct: 783 WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQ 842
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
S +L D+ K+G FE +K + MK G L + +Y S+I
Sbjct: 843 DMNFK---ISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHN 899
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS-DCIS 367
+ E + E E G D + L+ MY G ++T V S+ A L+ D +
Sbjct: 900 RFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYN 959
Query: 368 CAIV---NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
IV F G+ + ++ +G P +Y S++ A + L +A+++F E
Sbjct: 960 TLIVMYCRSFRPEEGF----TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEE 1015
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M+ K + Y M+ +Y G A L+A MK G EP + + LM +G A
Sbjct: 1016 MRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQ 1075
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
R+ E + ++ + + Y+TV AY + +++ E + +G D +
Sbjct: 1076 PREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTC 1135
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ S Q + + LL+ ++ G L RL
Sbjct: 1136 FIRAASLCEQTADAILLLKSLQDCGFDLPIRL 1167
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 173/397 (43%), Gaps = 5/397 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ M+ GI Y I+ Y K+G E L + + S + I+ +
Sbjct: 697 VFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRV--IIIE 754
Query: 268 SLGKSGRAFEALKFFRDMKE-KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ GK +A + +++ GI D I+ +LI ++A + A +F + G L
Sbjct: 755 AYGKIKLWQQAEILVKGLRQASGI--DRRIWNALIHAYAESGLYEKARAVFDNMIKTGPL 812
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+ ++ I +G +++ VVE +++ KIS +++ F+K + +K+
Sbjct: 813 PTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKI 872
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
Y + + G +P Y S+I+ C + E + EM+ GF + ++++ MY
Sbjct: 873 YNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTA 932
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G + + G EP+ YN+L+ M+ R+ + L EM +R +TP S
Sbjct: 933 AGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQS 992
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y ++++A +A + + + E R ++R+I +M+ ++ + LL MK
Sbjct: 993 YKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMK 1052
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
+G + H M + AG +A+ + N + +
Sbjct: 1053 EDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSS 1089
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 117/570 (20%), Positives = 229/570 (40%), Gaps = 47/570 (8%)
Query: 70 DSHHQTAV-PDAKKFDSFLHGMLKDP-QTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYL 127
D+ H + PD F++ ++ K +A D E ++ RP+ T LI
Sbjct: 245 DTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQ-SGLRPDVITYNTLISAC 303
Query: 128 VQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-L 186
QS + V++ ED PD T + +V+ R K + A L + + G +
Sbjct: 304 SQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDA 363
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ +NS + + K E++ AG + Y ++ Y K+G + L+ E
Sbjct: 364 ITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDE 423
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
R + TP + Y ++ DSLGK R EA K DM + G+ +++LIC++A
Sbjct: 424 M--RAMGCTPDAV-TYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAK 480
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
AE F G+ D L ++ ++ G EK L + M N + D +
Sbjct: 481 GGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDM 540
Query: 367 SCAIVNGFSKRR--------------------GYWAAVKVYEQLISQG-------CI--- 396
++ +K G + + + + +SQG C+
Sbjct: 541 YQVLLVALAKEDKCEEIEEVIQDMELLCRMNLGIISTMLIKARCVSQGAKLLKKACLQGY 600
Query: 397 -PGQVTYASIINAYCRIALYSKAEKVFIEM-QQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
P + SI+NAY + + + + + F + +++ S++ + K I
Sbjct: 601 KPDIKSLRSIMNAYVMTEKHEEGLSLLECICEHVSFSQDLISECSIMLLCRKQTSISAYE 660
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
++ K + N +Y L+ A+ + +++ +M+ + K Y ++IS Y
Sbjct: 661 QYSQRLMLKYPDQNCNLYEYLITCLIEAEFFSEACQVFCDMQFIGIEASKSIYESIISTY 720
Query: 515 NRAREFDMCVKFYNEFRMNGGVID----RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
+ + + ++ +G ++ R I G Q E LVK L+ + +
Sbjct: 721 CKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLR----QAS 776
Query: 571 KLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+D R++++ ++A ++GL +A+ + N
Sbjct: 777 GIDRRIWNALIHAYAESGLYEKARAVFDNM 806
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 71/179 (39%), Gaps = 4/179 (2%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F+P+ + L L+ + +D + + PD T + L+ R+ + +
Sbjct: 916 FKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGF 975
Query: 173 TLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
TLL G L ++ S + K + ++E+M+S L+ Y +M+ Y
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIY 1035
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
G+ K L K ++ T + H IL S G +G+ EA ++K +
Sbjct: 1036 RNAGNHSKAENLLAVMKEDGIEPTIATMH---ILMTSYGTAGQPREAENVLNNLKSSSL 1091
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 175/406 (43%), Gaps = 18/406 (4%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ +++ + + KL Y ++++MK G+ Y I+ Y+K+ E L E
Sbjct: 231 ITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEE 290
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
K + T F+ Y L LGK GR +A F +M + G D + +LI
Sbjct: 291 MKGKGCAPTVFT---YTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGR 347
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVES------MKNA 358
++ A +LF + D C V+ Y + + + E E+ MK
Sbjct: 348 AGRLEDALKLFGKM-------DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKAN 400
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+ S +++GF K A+ + E++ +G P Y S+I++ R Y A
Sbjct: 401 GIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAA 460
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
++F E+++ Y+ M+ +G GR+ DA+ L + + GC P+V+ YN+LM
Sbjct: 461 NELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSG 520
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
RA + + L + M TPD S+ +++ + ++ + + + + + D
Sbjct: 521 MIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPD 580
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ S+ E KL+++MK +G + D Y S + A+
Sbjct: 581 AVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAV 626
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 165/378 (43%), Gaps = 5/378 (1%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
+ +I++ K K ++F + K RK + T +Y L L G + + +
Sbjct: 162 WSEILKILGKAKMVNKALSVFYQIKGRKCNPT---ATVYNTLILMLMHEGHHEKIHELYN 218
Query: 284 DMKEKGILEDPSI-YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
++ +G +I Y++LI +F + A LF E +E G+ ++ ++ MY +
Sbjct: 219 EICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKL 278
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
VE L +VE MK + ++ G K A ++ ++ GC P V
Sbjct: 279 NKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLI 338
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDAMWLVAKMK 461
++IN R A K+F +M VV Y++++ A++ +A KMK
Sbjct: 339 NNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMK 398
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
A G P+ + Y L+D + + + L +EM+ + P +Y ++I + RA+ ++
Sbjct: 399 ANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYE 458
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ + E + N G + +M+ F ++ + V L + + G D Y++ M
Sbjct: 459 AANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALM 518
Query: 582 NALRDAGLQMQAQWLQQN 599
+ + AG+ +A L +N
Sbjct: 519 SGMIRAGMIDEAHSLMRN 536
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 178/443 (40%), Gaps = 40/443 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + + K + + A+ ++E K+ EK +L Y + K ++ +
Sbjct: 228 PDTITYSALISAFGK-LERYDFAFRLFDEMKENGLHPTEKIYTTILAMYF-KLNKVEAAL 285
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L E+ K P T + L+ + + A +L + DG + ++ N+ +
Sbjct: 286 RLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINIL 345
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + ++ KM S + Y +++A ++ AAL+ E K +
Sbjct: 346 GRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFE--KMKANGIA 403
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
S+ Y IL D K+ R +AL +M EKG P+ Y SLI S + A EL
Sbjct: 404 PSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANEL 463
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F+E +E V ++ + G ++SD
Sbjct: 464 FQELKENCGRSSARVYAVMIKHFGNCG-----------------RLSD------------ 494
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
AV ++ + GC P TY ++++ R + +A + M++ G + +
Sbjct: 495 ------AVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKS 548
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
++ ++ KTG + A+ + KMK P+ YN+++ RA KL +EM+
Sbjct: 549 HNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMK 608
Query: 497 RRKVTPDKVSYTTVISAYNRARE 519
+ D ++Y++++ A + E
Sbjct: 609 LKGFEYDSITYSSILEAVGKVDE 631
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 117/531 (22%), Positives = 228/531 (42%), Gaps = 54/531 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR--PEKSTLKLLIRYLVQSKKWDS 135
PD ++ F+ G+ K E D + KK+ E + P T L+ L+++ + D
Sbjct: 74 PDYVTYNVFIDGLCK----AERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-------EIALLA 188
+++ E P T + ++ +A + + A + + +G AL++
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIS 189
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+ +G ++ +Y + ++ E + G+ D + ++ G+ E A F E
Sbjct: 190 GLAKIGKLDEALVYLNQMV--ENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELD 247
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
LD T F+ + L +L K+ R EA+ F + M E+ Y SL+ F +
Sbjct: 248 D-SLDLTHFT---FNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLG 303
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ A KEA E+G + D ++ + G VE+ + M+N +
Sbjct: 304 RLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYA 363
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
A+++GF K + A +VY Q++ G + VTY I++ C+ ++A F+ M+++
Sbjct: 364 ALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEER 423
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G VV YS+++ + G + A+ L +M +GCEPN+ YN ++ RA L +
Sbjct: 424 GCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKA 483
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
++++ +R++ PD V +N F + G+
Sbjct: 484 YFYFEKLLQRRLCPD--------------------VYTFNSF--------------LHGL 509
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL-RDAGLQMQAQWLQQ 598
+L + + V+L + M S+GT + Y M+ + R GL++ + +
Sbjct: 510 CQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHE 560
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 189/464 (40%), Gaps = 57/464 (12%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR---PEKSTLKLLIRYLVQSKKWD 134
PDA + + + G+ K + E A Y N+ + R P+ L+IR L S +
Sbjct: 179 PDAFVYTALISGLAKIGKLDE-ALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLE 237
Query: 135 SIVSLSEDFKIYNVLPDAH-TCSRLVASCVRARKFKIANTLL------QVFITDGEIALL 187
++ ++ + L H T + LVA+ +A + + A + + F T L
Sbjct: 238 DALAYFDELD--DSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPT-----LF 290
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+ S + G+ KL +L ++ G + D+ Y I++ K+G E+ F E
Sbjct: 291 TYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 350
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
++R + + Y L D K+ +A + +R M + G + Y ++
Sbjct: 351 RNRGYEPDAVT---YAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKA 407
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
V A F EE+G C+ V+ Y
Sbjct: 408 GRVAEAYATFLAMEERG-------CVATVVTY---------------------------- 432
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
A+++GF AAV+++ +++ +GC P V+Y II CR +KA F ++ Q
Sbjct: 433 SALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQ 492
Query: 428 KGFDKCVVAYSSMV-AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+ V ++S + + + + D + L M ++G PN+ Y+ LMD RA L
Sbjct: 493 RRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLE 552
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+++ EM R V PD V + T+I A D ++ + E
Sbjct: 553 VTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL 596
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 98/209 (46%), Gaps = 3/209 (1%)
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
L D VC L+ + G +++ + +++ M + ++ + ++NG + + A
Sbjct: 6 LVDTRVCTALLNGLCKTGQLDRAMLLLDEMPCSPDMVAFTV---VINGLCREKRLDEAFS 62
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
V E+ + GC P VTY I+ C+ A ++ +M +K V Y+++V
Sbjct: 63 VLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLL 122
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K GR+ +AM ++ +M KG P + Y ++D +A + + +++ +M PD
Sbjct: 123 KAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF 182
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNG 534
YT +IS + + D + + N+ NG
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENG 211
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 4/210 (1%)
Query: 361 KISDCISC-AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
K+ D C A++NG K A+ + +++ C P V + +IN CR +A
Sbjct: 5 KLVDTRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAF 61
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
V + G + V Y+ + K R+ DA L+ KM K C P Y +L+D
Sbjct: 62 SVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGL 121
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+A L + + ++M + +P +YT VI ++A + + + + NG D
Sbjct: 122 LKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDA 181
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ ++ +K+ +++E + L M G
Sbjct: 182 FVYTALISGLAKIGKLDEALVYLNQMVENG 211
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 88/199 (44%), Gaps = 4/199 (2%)
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
+++N C+ +A + EM +VA++ ++ + R+ +A ++ +
Sbjct: 14 ALLNGLCKTGQLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKRLDEAFSVLERAVRA 70
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
GCEP+ YN +D +A+ + +L K+M+ +K P V+YT ++ +A D
Sbjct: 71 GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA 130
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ + G +++ SK ++EE ++ DM G + D +Y + ++
Sbjct: 131 MAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISG 190
Query: 584 LRDAG-LQMQAQWLQQNFE 601
L G L +L Q E
Sbjct: 191 LAKIGKLDEALVYLNQMVE 209
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 207/450 (46%), Gaps = 7/450 (1%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
+I L Q D + ++ K +LPD ++ S L+ R + A+ + + G
Sbjct: 286 VIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSG 345
Query: 183 EIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ + +++ + G+ K + V+E+MK++GI+ D Y +++ + + GD +
Sbjct: 346 ILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAI 405
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
+ E S + F+ Y L KS + ALK FR M++ G+ D ++
Sbjct: 406 KFWEEMTSNNFSPSAFN---YCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHIL 462
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A L ++ +E G+ +P + + + EK L ++ M +
Sbjct: 463 SIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNV- 521
Query: 362 ISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ D ++ +++ F+KR AV ++ ++ G TY +IN + A +
Sbjct: 522 LPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYR 581
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+F M++ +AY+S+VA + TG + A L +M +GC PNV Y ++ +
Sbjct: 582 LFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYL 641
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+ Q KL+++M+ R V PD++ YT +I+A+ E + ++E + G
Sbjct: 642 KLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNV 701
Query: 541 IA-GIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ ++ + KL++ ++ KL ++M+++G
Sbjct: 702 VMYTCLINSYIKLNKRDQAEKLYEEMRAKG 731
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/517 (20%), Positives = 220/517 (42%), Gaps = 47/517 (9%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCS-------RLVASCVRARKFKIANTL 174
L++ LV+ + D + L E + P+ HT + R V V R+ + L
Sbjct: 176 FLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRR--ASEIL 233
Query: 175 LQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
+++++ ++ + + + G K+ ++ + + + L++ C+ ++ +
Sbjct: 234 GKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQG 293
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
G ++ + +F E K+ + +S Y IL D + GR +A + F++M+ GIL +
Sbjct: 294 GILDEASEVFKEMKNSGILPDVYS---YSILIDGFCRKGRVDQASEVFKEMRNSGILPNI 350
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
Y+ LI F V A E+F+E + G+L D L+ + +G ++ + E
Sbjct: 351 YSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEE 410
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
M + S C+++ G+ K + + A+K + + G P + I++ YCR
Sbjct: 411 MTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPD 470
Query: 415 YSKAEKVFIEMQQKG--FDK----------C-----------------------VVAYSS 439
++KA + + Q+ G F+ C VV YS+
Sbjct: 471 FNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYST 530
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
+++ + K A+ L KM G NV Y L+++ + +L+K M+ +
Sbjct: 531 LISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESR 590
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
V PD+++YT++++ + E ++E G + + + KL++ +
Sbjct: 591 VYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAH 650
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
KL + MK G D+ LY + A + G +A+ L
Sbjct: 651 KLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEAL 687
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 153/373 (41%), Gaps = 13/373 (3%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+E+ + + +PD + + G + A ++ E F P LI
Sbjct: 370 LEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDS-AIKFWEEMTS-NNFSPSAFNYCSLI 427
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVL---PDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+ +SK++ + + ++F+I L PD C+ +++ R F A L + F +
Sbjct: 428 KGYYKSKQFANAL---KEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQEN 484
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G ++N + + + + + M ++ D Y ++ + K +SEK
Sbjct: 485 GVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKA 544
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
LF+ K K+ T F+ Y IL + + A + F+ MKE + D Y SL
Sbjct: 545 VMLFI--KMTKVGIT-FNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSL 601
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ F + E+ A LF E +G + + Y++ + + E MK +
Sbjct: 602 VAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGV 661
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG-CIPGQVTYASIINAYCRIALYSKAE 419
+ ++ F A +++++ +G C P V Y +IN+Y ++ +AE
Sbjct: 662 YPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAE 721
Query: 420 KVFIEMQQKGFDK 432
K++ EM+ KG +
Sbjct: 722 KLYEEMRAKGLSR 734
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/486 (20%), Positives = 208/486 (42%), Gaps = 39/486 (8%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+L Y + W+ I+ L ++ + + D TCS ++++C R A ++
Sbjct: 250 MLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSE 309
Query: 182 GEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G +A +NS + + K +Y + + ++M+ D Y +++ AY + G E+
Sbjct: 310 GYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEE- 368
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
A F++ RK P + Y + ++ GK+G+ +AL FFR MKE G + + Y ++
Sbjct: 369 GADFIDTMIRK-GIMP-NAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAI 426
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ + ++ ++ + G + ++ M +G+ + V MK+
Sbjct: 427 LGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGF 486
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ + A++ + + VK+YE++I G P TY +++NA R + AE
Sbjct: 487 EPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAES 546
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD--------------AMWLV------AKM 460
V ++M+ KGF +YS M+ Y K G R W++ A
Sbjct: 547 VILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANF 606
Query: 461 KAK---------------GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K + G +P++ ++NS++ + + K + ++ + + + PD V
Sbjct: 607 KRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLV 666
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y +++ Y R E + + +GG D ++ F + ++E ++ L +M
Sbjct: 667 TYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEM 726
Query: 566 KSEGTK 571
G +
Sbjct: 727 TISGIR 732
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 178/392 (45%), Gaps = 10/392 (2%)
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFN 190
KW + S + KI N L + +V R + +A LL ++ + + + + A+
Sbjct: 159 KWAILNLYSRNEKIDNQLVEL-----MVRILGRESQHSVALRLLDEISVEEYSLDVRAWT 213
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS-EKVAALFLECKS 249
+ + Y+++ Y I ++EKM+ G+ Y +++ Y K+G S K+ L E +S
Sbjct: 214 TILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRS 273
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
L+ F+ C G+ G EA KFF +K +G + Y SL+ F
Sbjct: 274 NGLEFDEFTCSTVISAC---GREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGI 330
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
A + KE E+ D +LV Y+ G E+ D +++M + +
Sbjct: 331 YSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTT 390
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++N + K A+ + Q+ GC+P TY +I+ + + + + +M+ G
Sbjct: 391 VINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNG 450
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
V +++M+AM G G + + +MK+ G EPN +N+L+ +GR + V
Sbjct: 451 CAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVV 510
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
K+++EM + TP +Y +++A R +++
Sbjct: 511 KMYEEMIKAGFTPCVTTYNALLNALARRGDWE 542
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 169/389 (43%), Gaps = 47/389 (12%)
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
K A L L ++ K+D+ + +++ LG+ + AL+ ++ + D +
Sbjct: 159 KWAILNLYSRNEKIDN-----QLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWT 213
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLV-EKTLDVVESM 355
+++ +++ I + + A +F++ + G+ P + V++ Y + G K L +++ M
Sbjct: 214 TILHAYSRIGKYERAITMFEKMRKTGL--SPTLVTYNVMLDVYGKMGRSWNKILGLLDEM 271
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
++ L+ D +C+ V R G A K + +L S+G + G TY S++ + + +
Sbjct: 272 RSNGLEF-DEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGI 330
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVA-------------------------------- 442
YS+A + EM++ +V Y+ +VA
Sbjct: 331 YSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTT 390
Query: 443 ---MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
YGK G+ A+ +MK GC PNV YN+++ M G+ L ++ + +M
Sbjct: 391 VINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNG 450
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
P+ V++ T+++ + + E + G +R ++G + + ++V
Sbjct: 451 CAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVV 510
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAG 588
K+ ++M G Y++ +NAL G
Sbjct: 511 KMYEEMIKAGFTPCVTTYNALLNALARRG 539
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/415 (20%), Positives = 175/415 (42%), Gaps = 43/415 (10%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T ++ L + + + ++ + D + P++ T + ++A C K N +
Sbjct: 418 PNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRV 477
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + G E FN+ +G Y + + +YE+M AG Y ++ A +
Sbjct: 478 FREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALAR 537
Query: 234 IGDSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
GD E ++ L+ KS+ K + T +S + C + G +GR E ++ ++ I
Sbjct: 538 RGDWEAAESVILDMKSKGFKPNETSYSLMLN---CYAKGGNGRGIEKIE--EEIYNGHIF 592
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ +L+ + + E F+E + G D LVL
Sbjct: 593 PSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPD------LVLF------------- 633
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
N+ L I F+K + Y A ++ + G P VTY S+++ Y R
Sbjct: 634 -----NSMLSI-----------FAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYAR 677
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
K E++ +Q+ G +V+Y++++ + + G +++A+ +++M G P +
Sbjct: 678 GGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVT 737
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
YN+ + + +VE++ M + P++++Y V+ Y + +++ + F
Sbjct: 738 YNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDF 792
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 86/199 (43%), Gaps = 12/199 (6%)
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
+ G A ++ + + LYS+ EK+ D +V MV + G+ + A+
Sbjct: 147 LSGNWKRAVLLFKWAILNLYSRNEKI---------DNQLVEL--MVRILGRESQHSVALR 195
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L+ ++ + +V + +++ + R + ++++M + ++P V+Y ++ Y
Sbjct: 196 LLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYG 255
Query: 516 R-AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ R ++ + +E R NG D ++ + ++E K +KSEG
Sbjct: 256 KMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGT 315
Query: 575 RLYHSAMNALRDAGLQMQA 593
Y+S + AG+ +A
Sbjct: 316 FTYNSLLQVFGKAGIYSEA 334
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 176/436 (40%), Gaps = 42/436 (9%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
FNS + GY + + +++KM G D Y ++E + G ++ LF E
Sbjct: 12 TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM 71
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+ HMY L L + R E L R MKE G YA+++
Sbjct: 72 DQPDM-------HMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRE 124
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+ K AEE+ +E EKG+ C ++ Y +EG + L V+E MK K +
Sbjct: 125 RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 184
Query: 368 CAIVNGF-------------SKRR--GYWAAVKVYEQLISQGCIPG-------------- 398
A+V GF +K R G Y LI CI G
Sbjct: 185 NALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 244
Query: 399 ------QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
Q TY ++INA C+ +A +F ++ +G V ++S++ K+G+
Sbjct: 245 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 304
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A + KM + GC P+ + Y+S ++ + K ++ EM ++ V P V+YT VI
Sbjct: 305 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH 364
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ R + + + + E +G D + + ++ E +L +M G +
Sbjct: 365 KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 424
Query: 573 DERLYHSAMNALRDAG 588
D Y++ M+ G
Sbjct: 425 DTMAYNTLMDGHASIG 440
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 134/304 (44%), Gaps = 4/304 (1%)
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M G D + SLI + +V +A +LF + +G +D L+ E G
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+++ +++ M + + A+V G + + ++ G P YA+
Sbjct: 61 IDEAVELFGEMDQPDMH----MYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+++ CR +AE++ EM +KG CVV ++++ Y K GR+ DA+ ++ MK +G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
C+PNVW YN+L+ + + L +M V PD V+Y +I +
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ +G + D+ ++ K + ++ L +++ G K + ++S +N L
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296
Query: 585 RDAG 588
+G
Sbjct: 297 CKSG 300
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 116/556 (20%), Positives = 199/556 (35%), Gaps = 68/556 (12%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PDA F+S + G + Q ++A D +++ L F + + LI L ++ + D V
Sbjct: 8 PDAYTFNSLIVGYCRTNQV-DVARDLFDKMP-LRGFAQDVVSYATLIEGLCEAGRIDEAV 65
Query: 138 SL-----SEDFKIYNVL--------------------------PDAHTCSRLVASCVRAR 166
L D +Y L P + +V R R
Sbjct: 66 ELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRER 125
Query: 167 KFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
K K A +LQ G ++ + + Y K + V E MK G + Y
Sbjct: 126 KAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYN 185
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+++ + G K A+ L K R P + Y +L G A + R M
Sbjct: 186 ALVQGFCNEGKVHK--AMTLLNKMRACGVNPDAV-TYNLLIRGQCIDGHIESAFRLLRLM 242
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+ G++ D Y +LI + A LF E +G+ + L+ + G
Sbjct: 243 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 302
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+ +E M +A + + K +G + +++ + P V Y +
Sbjct: 303 DIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIV 362
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
I+ + Y + + EM G + VV Y++ + Y GR+ +A ++ +M G
Sbjct: 363 IHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGV 422
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR------- 518
+ YN+LMD H + K+M P++ +Y ++ R R
Sbjct: 423 TVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLP 482
Query: 519 -----------------EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
FD+ K NEF N G + G FS+ + EE L
Sbjct: 483 LTPAGVWKAIELTDVFGLFDVMKK--NEFLPNSGTYSSILEG-----FSEDGRTEEATSL 535
Query: 562 LQDMKSEGTKLDERLY 577
+ MK + L+E +Y
Sbjct: 536 VSLMKEDSISLNEDIY 551
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 166/429 (38%), Gaps = 27/429 (6%)
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV-ASCVR 164
E KL +P T L++ K ++L + V PDA T + L+ C+
Sbjct: 170 ELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCID 229
Query: 165 ARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGC 223
+ A LL++ DG IA +N+ + K +++ +++ GI ++
Sbjct: 230 GH-IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVT 288
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
+ ++ K G ++ +A FLE K TP T+ Y + L K + E L F
Sbjct: 289 FNSLINGLCKSGKAD-IAWKFLE-KMVSAGCTP-DTYTYSSFIEHLCKMKGSQEGLSFIG 345
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIE 341
+M +K + Y +I L + E G +P+V M Y
Sbjct: 346 EMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC--NPDVVTYTTSMRAYCI 403
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
EG + + +V+ M + + +++G + AV + +Q+ S +P Q T
Sbjct: 404 EGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFT 463
Query: 402 YASIINAYCRIAL-----------------YSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
Y ++ R+ L + +F M++ F YSS++ +
Sbjct: 464 YFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGF 523
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ GR +A LV+ MK N IY +L+ ++K L M + P
Sbjct: 524 SEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQL 583
Query: 505 VSYTTVISA 513
+SY ++S
Sbjct: 584 MSYQHLLSG 592
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 107/518 (20%), Positives = 216/518 (41%), Gaps = 70/518 (13%)
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNS 191
W +++L + + + D +T + L++ C R +K A + G E + NS
Sbjct: 228 WKEVLALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNS 287
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL--FLECKS 249
+ Y K Y I V ++M+ G Y ++ +Y K G E+ L +E K
Sbjct: 288 LLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKG 347
Query: 250 RKLDSTPFSTHM------------------------------YKILCDSLGKSGRAFEAL 279
+ D ++T + Y L G G+ E +
Sbjct: 348 IEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMM 407
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
F +++ G + D + +L+ F +FKE ++ G + + + + L+ Y
Sbjct: 408 IVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSY 467
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPG 398
GL ++ +++ + M A + A+++ + R G W A K++ ++ + P
Sbjct: 468 SRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALA-RGGRWEQAEKLFAEMENLDSRPD 526
Query: 399 QVTYASIINAYC-----------------------------------RIALYSKAEKVFI 423
+++Y+S+++AY ++ S EK F+
Sbjct: 527 ELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFL 586
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E++++ + ++M+++YGK G ++ +++ MK + YNSLM M+ R
Sbjct: 587 ELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLG 646
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ + E + E++ + PD+ SY T+I AY R + + ++E + +G V D
Sbjct: 647 DCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYN 706
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
I V + S EE + L++ M + G K +ER Y++ +
Sbjct: 707 IFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTIL 744
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 190/463 (41%), Gaps = 79/463 (17%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTIL- 207
PDA + L+++ RA +F+ A + + + +G AL+ +N + Y+K+ + + +L
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ + M+ GI LD Y ++ C+ R L YK
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISC----------------CRRRAL---------YK---- 264
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
EA K F +M+ G D SL+ + A + KE E+ G
Sbjct: 265 ---------EAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEMEQGGC-- 313
Query: 328 DPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
P V L+ Y+++GL+E+ + E M+ ++ +V+G + AA+
Sbjct: 314 PPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIG 373
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
Y +++ GC P TY ++I + + + VF E++ GF VV +++++A++G
Sbjct: 374 TYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFG 433
Query: 446 KTG------------------RIRD-----------------AMWLVAKMKAKGCEPNVW 470
+ G RD AM + +M G P++
Sbjct: 434 QNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDIS 493
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YN+++ R Q EKL+ EME PD++SY++++ AY A++ D +
Sbjct: 494 TYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDI 553
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ +V V SK++ + + K +++ LD
Sbjct: 554 YAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLD 596
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 123/260 (47%), Gaps = 36/260 (13%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA--------------- 413
A+++ S+ + AV V+ ++++ G P VTY +++ Y +IA
Sbjct: 181 ALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLALVDSMRK 240
Query: 414 ---------------------LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
LY +A KVF EM+ GF+ V +S++ +YGK R +
Sbjct: 241 DGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDE 300
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A+ ++ +M+ GC P+V YNSL+ + + L + +L +EME + + PD ++YTT++S
Sbjct: 301 AIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVS 360
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+RA + D + YNE NG + ++ + + E++ + +++S G
Sbjct: 361 GLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVP 420
Query: 573 DERLYHSAMNALRDAGLQMQ 592
D +++ + GL +
Sbjct: 421 DVVTWNTLLAVFGQNGLDTE 440
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 164/362 (45%), Gaps = 36/362 (9%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT-EVKLAEELFKEA 320
Y L +L ++ R +A+ FR M G+ Y ++ ++ I K L
Sbjct: 179 YTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLALVDSM 238
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
+ G+ D L+ L ++ V + M+ A + ++++ + K R Y
Sbjct: 239 RKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRY 298
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A+ V +++ GC P VTY S+I++Y + L +A ++ EM+ KG + V+ Y+++
Sbjct: 299 DEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTL 358
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG-RAK---------NLR---- 486
V+ + G+I A+ +M GC+PN+ YN+L+ +HG R K +R
Sbjct: 359 VSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGF 418
Query: 487 ---------------------QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
+V ++KEM++ P++ +Y ++IS+Y+R FD ++
Sbjct: 419 VPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAME 478
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
Y G D + ++ ++ + E+ KL +M++ ++ DE Y S ++A
Sbjct: 479 IYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYA 538
Query: 586 DA 587
+A
Sbjct: 539 NA 540
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 144/304 (47%), Gaps = 5/304 (1%)
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV---EKTL 349
D S Y +LI + + + + A +F+ G+ P + V++++ + ++ L
Sbjct: 175 DASAYTALISALSRASRFRDAVAVFRRMVANGVC--PALVTYNVVLHVYSKIAVPWKEVL 232
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+V+SM+ + + +++ +R Y A KV++++ + G P +VT S+++ Y
Sbjct: 233 ALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVY 292
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ Y +A V EM+Q G VV Y+S+++ Y K G + +A L +M+ KG EP+V
Sbjct: 293 GKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDV 352
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
Y +L+ RA + + EM R P+ +Y +I + +F + ++E
Sbjct: 353 ITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDE 412
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
R G V D ++ VF + E+ + ++MK G + Y S +++ GL
Sbjct: 413 IRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGL 472
Query: 590 QMQA 593
QA
Sbjct: 473 FDQA 476
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 200/486 (41%), Gaps = 56/486 (11%)
Query: 80 AKKFDSF-LHGMLKDPQTQELAYDYYNEAKKLPEF------------RPEKSTLKLLIRY 126
AK FD G D T D Y +A++ E P T LI
Sbjct: 267 AKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISS 326
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIA 185
V+ + L E+ ++ + PD T + LV+ RA K A + +G +
Sbjct: 327 YVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPN 386
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L +N+ + + + ++V+++++SAG V D + ++ + + G +V+ +F
Sbjct: 387 LCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFK 446
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E K K P Y L S + G +A++ ++ M E GI D S Y +++ + A
Sbjct: 447 EMK--KSGYVP-ERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALA 503
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVL------------------MYIEE----- 342
+ AE+LF E E R E+ +L +Y E
Sbjct: 504 RGGRWEQAEKLFAEMENLDS-RPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHN 562
Query: 343 GLVEKTLDVVESMKNA---------KLKISDC-ISCAIVNGFSKRRGYWAAVKVYEQLIS 392
GLV KTL +V S N +L+ C + ++N G VK E+++S
Sbjct: 563 GLV-KTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILS 621
Query: 393 ---QGCIP-GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+ I TY S+++ Y R+ K E + E++ +Y++M+ YG+ G
Sbjct: 622 LMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKG 681
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
++++A L ++MK G P++ YN + + + L + M P++ +Y
Sbjct: 682 QMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYN 741
Query: 509 TVISAY 514
T++ Y
Sbjct: 742 TILQEY 747
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 144/355 (40%), Gaps = 37/355 (10%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VPD +++ L ++ E++ + E KK + PE+ T LI + +D
Sbjct: 419 VPDVVTWNTLLAVFGQNGLDTEVS-GVFKEMKK-SGYVPERDTYVSLISSYSRCGLFDQA 476
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
+ + + + PD T + ++++ R +++ A L E+ L Y
Sbjct: 477 MEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLF------AEMENLDSRPDELSY 530
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY--------------KIGDSEKVAA 242
+ L Y+ +KMKS L Y + +E++ + D+EK
Sbjct: 531 SSLLHAYANAKKLDKMKS----LSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKA-- 584
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
FLE + R+ ++ + GK+G + + MKE I + Y SL+
Sbjct: 585 -FLELRRRRCS---LDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMH 640
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
++ + + + E + E + D ++ Y +G +++ + MK + L +
Sbjct: 641 MYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGL-V 699
Query: 363 SDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC---RIA 413
D ++ I V + + A+ + +++ GC P + TY +I+ YC RIA
Sbjct: 700 PDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIA 754
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 118/535 (22%), Positives = 231/535 (43%), Gaps = 21/535 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKL--LIRYLVQSKKWDS 135
PD+ + + G+ K + D N +KL ST+ LI L + +D
Sbjct: 8 PDSWSYGILIDGLAKAGKLN----DARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 63
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLV-ASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAM 193
L D P T + ++ ASC R + A L++ I DG + ++ +N+ M
Sbjct: 64 ARELFADMNRRGCPPSPVTYNVMIDASCKRG-MLEEACDLIKKMIEDGHVPDVVTYNTVM 122
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G K +L++ +M+ G + + I+ + ++ +F E +++ +
Sbjct: 123 DGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDI- 181
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
P + Y IL D L K+G+ EA K F+ M + GI Y +I + A
Sbjct: 182 --PPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEA 239
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVN 372
ELFK KG L+ + + G +++ +++ M + + D ++ +++
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDG-HVPDVVTYSTLIS 298
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G A + E ++ + C P VT ++I+ C+ +A +V M G
Sbjct: 299 GLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSP 358
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
VV Y+++V + + G+ A L++ M A+G PNV Y +L+ +A L + ++
Sbjct: 359 DVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVF 418
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+M+ P+ +YT +I + A + D +K + E G D + G + K
Sbjct: 419 AQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKS 478
Query: 553 SQIEELVKLLQD----MKSEGTKLDERLYHSAMNALRDAG-LQMQAQWLQQNFEG 602
+ +++L++ ++SE + +Y A++ L +AG ++M +++ G
Sbjct: 479 GRSARALEILREGRESLRSEA--WGDEVYRFAVDGLLEAGKMEMALGFVRDMVRG 531
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 95/243 (39%), Gaps = 4/243 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P ++ +HG+ K + +E A + + + P+ T L+ ++ + +
Sbjct: 323 PTVVTQNTLIHGLCKAGRIKE-AREVLDAMVSSGQ-SPDVVTYNTLVHGHCRAGQTERAR 380
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L D + P+ T + LV+ +A + A + + G L + + + G+
Sbjct: 381 ELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGF 440
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ ++ +M AGI D Y + K G S + + E + L S
Sbjct: 441 CSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGR-ESLRSEA 499
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ +Y+ D L ++G+ AL F RDM G L P ASL+ + A +
Sbjct: 500 WGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAV 559
Query: 317 FKE 319
+E
Sbjct: 560 LEE 562
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/486 (20%), Positives = 208/486 (42%), Gaps = 39/486 (8%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+L Y + W+ I+ L ++ + + D TCS ++++C R A ++
Sbjct: 250 MLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSE 309
Query: 182 GEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G +A +NS + + K +Y + + ++M+ D Y +++ AY + G E+
Sbjct: 310 GYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEE- 368
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
A F++ RK P + Y + ++ GK+G+ +AL FFR MKE G + + Y ++
Sbjct: 369 GADFIDTMIRK-GIMP-NAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAI 426
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ + ++ ++ + G + ++ M +G+ + V MK+
Sbjct: 427 LGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGF 486
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ + A++ + + VK+YE++I G P TY +++NA R + AE
Sbjct: 487 EPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAES 546
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD--------------AMWLV------AKM 460
V ++M+ KGF +YS M+ Y K G R W++ A
Sbjct: 547 VILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANF 606
Query: 461 KAK---------------GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K + G +P++ ++NS++ + + K + ++ + + + PD V
Sbjct: 607 KRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLV 666
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y +++ Y R E + + +GG D ++ F + ++E ++ L +M
Sbjct: 667 TYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEM 726
Query: 566 KSEGTK 571
G +
Sbjct: 727 TISGIR 732
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 178/392 (45%), Gaps = 10/392 (2%)
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFN 190
KW + S + KI N L + +V R + +A LL ++ + + + + A+
Sbjct: 159 KWAILNLYSRNEKIDNQLVEL-----MVRILGRESQHSVALRLLDEISVEEYSLDVRAWT 213
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS-EKVAALFLECKS 249
+ + Y+++ Y I ++EKM+ G+ Y +++ Y K+G S K+ L E +S
Sbjct: 214 TILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRS 273
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
L+ F+ C G+ G EA KFF +K +G + Y SL+ F
Sbjct: 274 NGLEFDEFTCSTVISAC---GREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGI 330
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
A + KE E+ D +LV Y+ G E+ D +++M + +
Sbjct: 331 YSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTT 390
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++N + K A+ + Q+ GC+P TY +I+ + + + + +M+ G
Sbjct: 391 VINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNG 450
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
V +++M+AM G G + + +MK+ G EPN +N+L+ +GR + V
Sbjct: 451 CAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVV 510
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
K+++EM + TP +Y +++A R +++
Sbjct: 511 KMYEEMIKAGFTPCVTTYNALLNALARRGDWE 542
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 169/389 (43%), Gaps = 47/389 (12%)
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
K A L L ++ K+D+ + +++ LG+ + AL+ ++ + D +
Sbjct: 159 KWAILNLYSRNEKIDN-----QLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWT 213
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLV-EKTLDVVESM 355
+++ +++ I + + A +F++ + G+ P + V++ Y + G K L +++ M
Sbjct: 214 TILHAYSRIGKYERAITMFEKMRKTGL--SPTLVTYNVMLDVYGKMGRSWNKILGLLDEM 271
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
++ L+ D +C+ V R G A K + +L S+G + G TY S++ + + +
Sbjct: 272 RSNGLEF-DEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGI 330
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVA-------------------------------- 442
YS+A + EM++ +V Y+ +VA
Sbjct: 331 YSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTT 390
Query: 443 ---MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
YGK G+ A+ +MK GC PNV YN+++ M G+ L ++ + +M
Sbjct: 391 VINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNG 450
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
P+ V++ T+++ + + E + G +R ++G + + ++V
Sbjct: 451 CAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVV 510
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAG 588
K+ ++M G Y++ +NAL G
Sbjct: 511 KMYEEMIKAGFTPCVTTYNALLNALARRG 539
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/415 (20%), Positives = 175/415 (42%), Gaps = 43/415 (10%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T ++ L + + + ++ + D + P++ T + ++A C K N +
Sbjct: 418 PNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRV 477
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + G E FN+ +G Y + + +YE+M AG Y ++ A +
Sbjct: 478 FREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALAR 537
Query: 234 IGDSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
GD E ++ L+ KS+ K + T +S + C + G +GR E ++ ++ I
Sbjct: 538 RGDWEAAESVILDMKSKGFKPNETSYSLMLN---CYAKGGNGRGIEKIE--EEIYNGHIF 592
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ +L+ + + E F+E + G D LVL
Sbjct: 593 PSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPD------LVLF------------- 633
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
N+ L I F+K + Y A ++ + G P VTY S+++ Y R
Sbjct: 634 -----NSMLSI-----------FAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYAR 677
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
K E++ +Q+ G +V+Y++++ + + G +++A+ +++M G P +
Sbjct: 678 GGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVT 737
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
YN+ + + +VE++ M + P++++Y V+ Y + +++ + F
Sbjct: 738 YNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDF 792
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 86/199 (43%), Gaps = 12/199 (6%)
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
+ G A ++ + + LYS+ EK+ D +V MV + G+ + A+
Sbjct: 147 LSGNWKRAVLLFKWAILNLYSRNEKI---------DNQLVEL--MVRILGRESQHSVALR 195
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L+ ++ + +V + +++ + R + ++++M + ++P V+Y ++ Y
Sbjct: 196 LLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYG 255
Query: 516 R-AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ R ++ + +E R NG D ++ + ++E K +KSEG
Sbjct: 256 KMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGT 315
Query: 575 RLYHSAMNALRDAGLQMQA 593
Y+S + AG+ +A
Sbjct: 316 FTYNSLLQVFGKAGIYSEA 334
>gi|414879860|tpg|DAA56991.1| TPA: hypothetical protein ZEAMMB73_837882 [Zea mays]
Length = 677
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 178/385 (46%), Gaps = 20/385 (5%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y ++ + + G+ + L LE + R + FS Y L +L ++G AL F
Sbjct: 145 YNLLLRSACRAGELRLASGLLLEMRERGVTPDAFS---YSTLLAALTRAGHLDHALTFLP 201
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
M++ + D ++++LI + A LF G+ D + V Y +
Sbjct: 202 LMEDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSD 261
Query: 344 LVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCI-PGQVT 401
L+ ++ A D + I+ ++R + AAV ++ + + + P
Sbjct: 262 LLRDAKRMLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDISV 321
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ I+NAY ++ L +A+++F M++ G VV Y++M+ +YG G +A+ L M+
Sbjct: 322 FNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMR 381
Query: 462 A---------KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
+ +PNV YN+++ ++G++ + +L +EM+ V PD ++Y+T++S
Sbjct: 382 STSDGNGGAGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILS 441
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK-SEGTK 571
+ +A + D + + + R G ID + MV + + + + +LL+D+K EG
Sbjct: 442 IWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEGIP 501
Query: 572 LDERLYHSAMNALRDAGLQMQAQWL 596
+ +A+ L AG +A WL
Sbjct: 502 KE-----TAIKILASAGRLEEAAWL 521
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/483 (19%), Positives = 194/483 (40%), Gaps = 69/483 (14%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYY--- 203
V PDA + S L+A+ RA A T L + D L S N +H+
Sbjct: 172 GVTPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLILFS-----NLIHLALRGG 226
Query: 204 ---STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF--- 257
+ ++ ++++AGI D Y + AY K + L + K L P
Sbjct: 227 DAPKALALFSRLRAAGIRPDLKAYNAAVAAYCK-------SDLLRDAKRMLLHDMPADGV 279
Query: 258 --STHMYKILCDSLGKSGRAFEALKFFRDMKEKG-ILEDPSIYASLICSFASITEVKLAE 314
Y + +L + GR A+ F M+ + D S++ ++ ++ + + A+
Sbjct: 280 APDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDISVFNIILNAYGQLDLAREAD 339
Query: 315 ELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKN---------AKLKIS 363
LF G+ P V ++ +Y + GL + + + + M++ + +K +
Sbjct: 340 RLFWSMRRAGV--PPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGGAGSSVKPN 397
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
++ + K A ++ +++ + G P +TY++I++ + + +A ++F
Sbjct: 398 VVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKLDRAARLFE 457
Query: 424 EMQQKGFDKCVVAYSSMVAMYGK-------------------------------TGRIRD 452
++++ G + V Y +MV Y + GR+ +
Sbjct: 458 KLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEGIPKETAIKILASAGRLEE 517
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A WL + G + ++ ++MD++ + + R V +++ EM + PD T ++
Sbjct: 518 AAWLFRRAVNTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQLPDSEIIATAMN 577
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
AY + +EFD Y R G V + M+ + + L L+ ++ S +
Sbjct: 578 AYGKLKEFDKAAALYQAMREAGCVFSDRVHFQMISLLGAQKDFKALEVLVGEL-SHDPSI 636
Query: 573 DER 575
D+R
Sbjct: 637 DKR 639
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/403 (20%), Positives = 163/403 (40%), Gaps = 16/403 (3%)
Query: 139 LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGGY 196
L D V PDA T S ++A+ R + A +L + + FN + Y
Sbjct: 270 LLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDISVFNIILNAY 329
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK----- 251
+L + ++ M+ AG+ Y ++ Y G + LF +S
Sbjct: 330 GQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGG 389
Query: 252 -LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
S + Y + GKS +A + ++M+ G+ D Y++++ + ++
Sbjct: 390 AGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKL 449
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A LF++ E G DP + +V+ Y GLV + ++ +K+ + + +
Sbjct: 450 DRAARLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEGIPKETAIKIL 509
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG- 429
+ W ++ + ++ G I + ++++ Y + + +VF EM++ G
Sbjct: 510 ASAGRLEEAAW----LFRRAVNTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQ 565
Query: 430 -FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
D ++A ++M A YGK A L M+ GC + ++ ++ + G K+ + +
Sbjct: 566 LPDSEIIA-TAMNA-YGKLKEFDKAAALYQAMREAGCVFSDRVHFQMISLLGAQKDFKAL 623
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
E L E+ + Y Y RA +FD + ++ R
Sbjct: 624 EVLVGELSHDPSIDKRELYLVAAGVYERAYKFDKASQIISQIR 666
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 91/227 (40%), Gaps = 37/227 (16%)
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW---- 455
+ Y ++ + CR A + +EM+++G +YS+++A + G + A+
Sbjct: 143 IPYNLLLRSACRAGELRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPL 202
Query: 456 -------------------------------LVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
L ++++A G P++ YN+ + + ++
Sbjct: 203 MEDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDL 262
Query: 485 LRQVEK-LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV-IDRAIA 542
LR ++ L +M V PD +Y+ +++A R V ++ R V D ++
Sbjct: 263 LRDAKRMLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDISVF 322
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
I++ + +L E +L M+ G Y++ + DAGL
Sbjct: 323 NIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGL 369
>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Glycine max]
Length = 819
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 116/550 (21%), Positives = 230/550 (41%), Gaps = 64/550 (11%)
Query: 76 AVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKL-----LIRYLVQS 130
+P + F +++ G+ + ++ +L Y+ L FR + L++ ++R
Sbjct: 261 VIPHSYCFAAYIEGLCNNHRS-DLGYEV------LQAFRKGNAPLEVYAYTAVVRGFCNE 313
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAF 189
K D + +D + V+PD + S L+ ++ A L I+ G + +
Sbjct: 314 MKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVV 373
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
+ + ++ M + ++++K +G+ LD Y + +A +G E + E KS
Sbjct: 374 SCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKS 433
Query: 250 RKL--DSTPFSTHM------------------------------YKILCDSLGKSGRAFE 277
++L D ++T + Y +L L ++G A E
Sbjct: 434 KRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARE 493
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
+K M+ +G+ + + + +I S +V AE F E+K + E+ +V
Sbjct: 494 TVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNI----EIYSAMVN 549
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISC-AIVNGFSKRRGYWAAVKVYEQLISQGCI 396
Y E LV+K+ +V + N ++ SC +++ AVK+ ++++
Sbjct: 550 GYCETDLVKKSYEVFLKLLNQG-DMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVE 608
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P ++ Y+ I+ A C+ A +F +GF VV Y+ M+ Y + +++A L
Sbjct: 609 PSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDL 668
Query: 457 VAKMKAKGCEPNVWIYNSLMD------------MHGRAKNLR-QVEKLWKEMERRKVTPD 503
MK +G +P+V + L+D HG+ K V + ++ME+ K+ PD
Sbjct: 669 FQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPD 728
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
V YT ++ + + F V +++ +G D +V +E+ V LL
Sbjct: 729 VVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLN 788
Query: 564 DMKSEGTKLD 573
+M S+G D
Sbjct: 789 EMSSKGMTPD 798
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 2/272 (0%)
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV- 371
A + + +G+L D C L +E G V+K L V E +K I +C + AIV
Sbjct: 179 AIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGF-IPNCYTYAIVI 237
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
K+ + V+E++ G IP +A+ I C +V ++
Sbjct: 238 KALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGNAP 297
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
V AY+++V + ++ +A + M+ +G P+V++Y+SL+ + ++ NL + L
Sbjct: 298 LEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALAL 357
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
EM R V + V + ++ V + E + +G +D I+
Sbjct: 358 HDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCM 417
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
L ++E+ V+++++MKS+ LD + Y + +N
Sbjct: 418 LGKVEDAVEMVEEMKSKRLGLDVKHYTTLING 449
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 139/335 (41%), Gaps = 10/335 (2%)
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L + L + G +AL + +K G + + YA +I + ++K +F+E E G
Sbjct: 201 LFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVG 260
Query: 325 MLRDPEVCLKLVLMYIEEGLVEK-----TLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
++ C YIE GL +V+++ + + A+V GF
Sbjct: 261 VIPH-SYCFA---AYIE-GLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMK 315
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A V++ + QG +P Y+S+I+ YC+ +A + EM +G V S
Sbjct: 316 LDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSC 375
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ G+ G + + ++K G + YN + D + ++ +EM+ ++
Sbjct: 376 ILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKR 435
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ D YTT+I+ Y + + E + G D ++ S+ E V
Sbjct: 436 LGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETV 495
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
KLL M+S+G K + + + L G ++A+
Sbjct: 496 KLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAE 530
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 156/377 (41%), Gaps = 31/377 (8%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A++ + E K+ +P+ T +L L ++ V L + + + P++ T ++
Sbjct: 459 AFNMFKEMKE-KGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMII 517
Query: 160 ASCVRARKFKIANTLLQVFITDGEIALLAFNSAM-GGYNKLHMYYSTILVYEKMKSAGIV 218
K A +V+ E + SAM GY + + + V+ K+ + G +
Sbjct: 518 EGLCSGGKVLEA----EVYFNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDM 573
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
+++ GD EK L L + S MY + +L ++G A
Sbjct: 574 AKKASCFKLLSKLCMTGDIEKAVKLL---DRMLLSNVEPSKIMYSKILAALCQAGDMKNA 630
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
F +G D Y +I S+ + ++ A +LF++ + +G+ P+V VL+
Sbjct: 631 RTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGI--KPDVITFTVLL 688
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+G +++ L S + S +S ++ EQ+ P
Sbjct: 689 ---DGSLKEYLGKRFSSHGKRKTTSLYVS--------------TILRDMEQMKIN---PD 728
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
V Y +++ + + + +A +F +M + G + + Y+++V+ G + A+ L+
Sbjct: 729 VVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLN 788
Query: 459 KMKAKGCEPNVWIYNSL 475
+M +KG P+V I ++L
Sbjct: 789 EMSSKGMTPDVHIISAL 805
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 72/172 (41%)
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ ++ KA + +++G V+ + + + G + A+ + ++K G PN +
Sbjct: 173 LNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYT 232
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y ++ + +L+Q +++EMER V P + I D+ + FR
Sbjct: 233 YAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFR 292
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++ +V F +++E + DM+ +G D +Y S ++
Sbjct: 293 KGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHG 344
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 97/262 (37%), Gaps = 27/262 (10%)
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
S KLL + L + + V L + + NV P S+++A+ +A K A TL V
Sbjct: 578 SCFKLLSK-LCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDV 636
Query: 178 FITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
F+ G ++ + + Y +++ +++ MK GI D + +++ K
Sbjct: 637 FVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLK--- 693
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
E + F RK S ST RDM++ I D
Sbjct: 694 -EYLGKRFSSHGKRKTTSLYVST---------------------ILRDMEQMKINPDVVC 731
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y L+ + A LF + E G+ D LV G VEK + ++ M
Sbjct: 732 YTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMS 791
Query: 357 NAKLKISDCISCAIVNGFSKRR 378
+ + I A+ G K R
Sbjct: 792 SKGMTPDVHIISALKRGIIKAR 813
>gi|255661198|gb|ACU25768.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 426
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 169/338 (50%), Gaps = 6/338 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G +AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRR 378
+ G++ D V ++ ++ + L + ++ M+ A + + D +S A++ + + +
Sbjct: 70 LKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGV-MPDTVSYTALLTMYVENK 128
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y+
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNVVSYN 188
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSR 248
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 249 GIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHA 308
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K+ D +A++ L AG +A W+
Sbjct: 309 KRLLHELKTP----DNIPRDTAIHILARAGRIEEATWV 342
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 138/323 (42%), Gaps = 33/323 (10%)
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+A+ F +K GI+ D +Y S+I F + A L E G++ D L+
Sbjct: 62 KAISIFSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALL 121
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGC 395
MY+E + L V M+ K + D +C I+ + G A K++ + G
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKC-LLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGI 180
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P V+Y +++ Y L+ +A +F MQ+K ++ VV Y+SM+ +YGKT A
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANN 240
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV--------------- 500
L+ +M+++G EPN Y++++ + G+ L + L++++ +
Sbjct: 241 LIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYE 300
Query: 501 ----------------TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
TPD + T I RA + + + G V D +
Sbjct: 301 RAGLVSHAKRLLHELKTPDNIPRDTAIHILARAGRIEEATWVFRQAIDAGEVKDITVFER 360
Query: 545 MVGVFSKLSQIEELVKLLQDMKS 567
M+ +FSK + +V++ M+
Sbjct: 361 MIDLFSKYKKYSNIVEVFDKMRG 383
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 189/425 (44%), Gaps = 12/425 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T LI Y + +D +S + + V D S L+ + + A ++
Sbjct: 7 PDRYTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G + L+ +NS + + K ++ + +M++AG++ D+ Y ++ Y +
Sbjct: 67 FSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTMYVE 126
Query: 234 IGDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ ++F E + K LD T + I+ D G+ G A EA K F M++ GI
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWSMRKLGIE 181
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y +L+ + A LF+ + K + ++ ++++Y + EK ++
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++ M++ ++ + I++ + K A ++E+L S G QV Y ++I AY R
Sbjct: 242 IQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYER 301
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
L S A+++ E++ + + + + + GRI +A W+ + G ++ +
Sbjct: 302 AGLVSHAKRLLHELKTPD----NIPRDTAIHILARAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+ ++D+ + K + +++ +M + D V++AY + EF+ Y E +
Sbjct: 358 FERMIDLFSKYKKYSNIVEVFDKMRGLEYFSDSYVIALVLNAYGKLHEFEKANDVYTEMQ 417
Query: 532 MNGGV 536
G V
Sbjct: 418 DEGCV 422
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ +YNS++++ G+AK R+ L EM V PD VSYT +++ Y
Sbjct: 67 FSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKDIEQN 218
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 87/195 (44%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q + G E + +++ + + K+ +++EK++S+GI +D Y ++
Sbjct: 238 ANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K+ D+ P T ++ L ++GR EA FR + G
Sbjct: 298 AYERAGLVSHAKRLLHELKTP--DNIPRDTAIH-----ILARAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + D V ++ Y + EK
Sbjct: 351 EVKDITVFERMIDLFSKYKKYSNIVEVFDKMRGLEYFSDSYVIALVLNAYGKLHEFEKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M++ SD
Sbjct: 411 DVYTEMQDEGCVFSD 425
>gi|449443502|ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
gi|449492820|ref|XP_004159111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
Length = 704
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 163/352 (46%), Gaps = 9/352 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y ++ + K D E LF E +R K D+ FST I C L +A+++
Sbjct: 182 YNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFST---IISCARL--CSLPSKAVEW 236
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
F M D Y+++I ++ V +A L+ A + DP ++ ++
Sbjct: 237 FEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGV 296
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G + L+V E MK +K + I +++ + + W +Y+++I G P T
Sbjct: 297 AGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWAT 356
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
YAS++ AY R A V+ EM++KG V+ Y++++AM G + +A+ + MK
Sbjct: 357 YASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMK 416
Query: 462 AKG-CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ G C P+ W ++S++ ++ + + E++ +M P+ T++I Y +A+
Sbjct: 417 SSGTCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRV 476
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
D V+ +N+ G D G ++ V ++ + EL KL+ + KL
Sbjct: 477 DDVVRTFNQLIELGLTPDDRFCGCLLNVITQTPK-GELGKLIDCVVRANPKL 527
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 152/325 (46%), Gaps = 37/325 (11%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
++ +++ S A AL++F+DM + + Y + F +++ AE+LF+E +
Sbjct: 151 LVLNNMSNSQTALLALRYFQDMLKSS--KQTIFYNVTLKVFRKCRDMEGAEKLFEEMINR 208
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G+ D + S ISCA + + A
Sbjct: 209 GVKPD------------------------------NVTFSTIISCARLCSLPSK-----A 233
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
V+ +E++ S C P VTY+++I+AY R A ++ + + + +S+M+ +
Sbjct: 234 VEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKI 293
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+G G + + +MKA G +PN+ IYN L+D GRAK Q++ ++KEM + +P
Sbjct: 294 HGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPS 353
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+Y +++ AY RAR + + Y E + G ++ + ++ + + + + E V++ Q
Sbjct: 354 WATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQ 413
Query: 564 DMKSEGTKLDERLYHSAMNALRDAG 588
DMKS GT + S+M + G
Sbjct: 414 DMKSSGTCSPDSWTFSSMITIYSCG 438
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 118/264 (44%), Gaps = 10/264 (3%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR--KLDSTPFSTHMYKILC 266
+EKM S D Y +++AY + G+ + +L+ ++ ++D FST M KI
Sbjct: 237 FEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFST-MIKI-- 293
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
G +G L + +MK GI + IY L+ + + ++KE + G
Sbjct: 294 --HGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFS 351
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVK 385
L+ Y E L V + MK L+++ + ++ GY AV+
Sbjct: 352 PSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLL-AMCADVGYVNEAVE 410
Query: 386 VYEQLISQG-CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+++ + S G C P T++S+I Y S+AE++ +M + GFD + +S++ Y
Sbjct: 411 IFQDMKSSGTCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCY 470
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPN 468
GK R+ D + ++ G P+
Sbjct: 471 GKAKRVDDVVRTFNQLIELGLTPD 494
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 114/263 (43%), Gaps = 16/263 (6%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A+ Y+ A+ +R + +T +I+ + +D +++ E+ K + P+ +
Sbjct: 266 DMAFSLYDRART-ENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNC 324
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+ + RA++ T+ + I +G + + S + Y + ++VY++MK G
Sbjct: 325 LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKG 384
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL---DSTPFSTHMYKILCDSLGKSG 273
+ L+ Y ++ +G + +F + KS DS FS+ + C G
Sbjct: 385 LQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPDSWTFSSMITIYSC-----GG 439
Query: 274 RAFEALKFFRDMKEKGILEDPSIY--ASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+ EA + DM E G DP+I+ SLI + V F + E G+ D
Sbjct: 440 KVSEAEEMLNDMVEAGF--DPNIFVLTSLIQCYGKAKRVDDVVRTFNQLIELGLTPDDRF 497
Query: 332 --CLKLVLMYIEEGLVEKTLDVV 352
CL V+ +G + K +D V
Sbjct: 498 CGCLLNVITQTPKGELGKLIDCV 520
>gi|255549794|ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544853|gb|EEF46368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 706
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 177/393 (45%), Gaps = 9/393 (2%)
Query: 120 LKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
+L+ L + +K D + ED K + PD +T + ++ R K + L + +
Sbjct: 80 FNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKLDESLALFEEML 139
Query: 180 TDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE 238
G L+A+N+ + M TIL++ KM + Y I+ G
Sbjct: 140 NKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVILTLLAAEGQLH 199
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
K+ K +L + +Y L +L K G A EA + F +M D
Sbjct: 200 KLD------KVVELSRKYMNRSIYAYLVRTLNKLGHASEAHRLFCNMWSYHDRGDRDACL 253
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
S++ S + + A +L + EKG+ D + + + D+ E MK
Sbjct: 254 SMLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMK-L 312
Query: 359 KLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ D + I ++ F + + A+K++E+L + C P ++Y S+IN + +
Sbjct: 313 DGPLPDIFTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDE 372
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A F EMQ+KG + VV YS+++ +GKT ++ A L +M A+GC PN+ YN L+D
Sbjct: 373 AHIRFREMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLD 432
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
R+ + L+ +++++ +TPD ++Y+ +
Sbjct: 433 CLERSGRTAEAVDLYAKLKQQGLTPDSITYSVL 465
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 171/387 (44%), Gaps = 8/387 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY +MK G LD + +++A K ++ +F + K + + ++ Y I+
Sbjct: 64 VYLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYT---YTIMIR 120
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
G+ G+ E+L F +M KG + Y ++I + A+ V LF + EK R
Sbjct: 121 MTGRIGKLDESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKN-CR 179
Query: 328 DPEVCLKLVLMYIE-EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
E ++L + EG + K VVE ++ ++ I +V +K A ++
Sbjct: 180 PNEFTYSVILTLLAAEGQLHKLDKVVEL---SRKYMNRSIYAYLVRTLNKLGHASEAHRL 236
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ + S + S++ + C +A + ++ +KG + + Y+++ G+
Sbjct: 237 FCNMWSYHDRGDRDACLSMLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGR 296
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
+I L KMK G P+++ YN L+ GRA + + K+++E+E PD +S
Sbjct: 297 LKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIIS 356
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y ++I+ + + D + E + G D ++ F K ++E +L +M
Sbjct: 357 YNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEML 416
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQA 593
+EG + Y+ ++ L +G +A
Sbjct: 417 AEGCFPNIVTYNILLDCLERSGRTAEA 443
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 2/154 (1%)
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y +V Y ++ + + +MK KG +++ +N L+D + + + Q K++++M
Sbjct: 44 TYKCLVQAYLRSCDSDNGFRVYLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDM 103
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQ 554
+++ PD+ +YT +I R + D + + E +N G IA M+ +
Sbjct: 104 KKKHCEPDEYTYTIMIRMTGRIGKLDESLALFEEM-LNKGCSPNLIAYNTMIQALANSRM 162
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+++ + L M + + +E Y + L G
Sbjct: 163 VDKTILLFSKMMEKNCRPNEFTYSVILTLLAAEG 196
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 175/390 (44%), Gaps = 4/390 (1%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
++M + G D Y ++ K GD++ L + + KL+ +Y + D L
Sbjct: 5 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP---GVLIYNTIIDGL 61
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
K +AL F++M+ KGI + Y+SLI + A L + E+ + D
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
L+ +++EG + + + + M + S +++NGF A +++E
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
++S+ C P VTY ++I +C+ + +VF EM Q+G V Y+ ++ + G
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
A + +M + G PN+ YN+L+D + L + +++ ++R K+ P +Y
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 301
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+I +A + + + + G D M+ F + EE L ++MK +G
Sbjct: 302 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 361
Query: 570 TKLDERLYHSAMNA-LRDAGLQMQAQWLQQ 598
T + Y++ + A LRD + A+ +++
Sbjct: 362 TLPNSGCYNTLIRARLRDGDREASAELIKE 391
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 166/369 (44%), Gaps = 7/369 (1%)
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
E +L +N+ + G K + ++++M++ GI + Y ++ G +
Sbjct: 48 EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 107
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASL 300
L + RK++ F+ + L D+ K G+ EA K + +M ++ I DPSI Y+SL
Sbjct: 108 LLSDMIERKINPDVFT---FSALIDAFVKEGKLVEAEKLYDEMVKRSI--DPSIVTYSSL 162
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
I F + A+++F+ K D L+ + + VE+ ++V M L
Sbjct: 163 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 222
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ ++ G + A +++++++S G P +TY ++++ C+ KA
Sbjct: 223 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 282
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
VF +Q+ + + Y+ M+ K G++ D L + KG +P+V YN+++
Sbjct: 283 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 342
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
R + + + L+KEM+ P+ Y T+I A R + + + E R G D +
Sbjct: 343 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 402
Query: 541 IAGIMVGVF 549
G++ +
Sbjct: 403 TIGLVTNML 411
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 137/353 (38%), Gaps = 39/353 (11%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
RP T LI L +W L D + PD T S L+ + V+ K A
Sbjct: 82 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 141
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L + + +++ ++S + G+ ++E M S D Y +++ +
Sbjct: 142 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 201
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K E+ +F E R L +T Y IL L ++G A + F++M G+
Sbjct: 202 CKYKRVEEGMEVFREMSQRGLVG---NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 258
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y +L+ G+ ++ G +EK + V
Sbjct: 259 PNIMTYNTLL---------------------DGLCKN--------------GKLEKAMVV 283
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
E ++ +K++ + ++ G K ++ L +G P V Y ++I+ +CR
Sbjct: 284 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 343
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+A+ +F EM++ G Y++++ + G + L+ +M++ G
Sbjct: 344 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 396
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 61/143 (42%)
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
M L+ +M AKGC+P++ Y +++ + + L +ME+ K+ P + Y T+I
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ + D + + E G + ++ + + +LL DM D
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 574 ERLYHSAMNALRDAGLQMQAQWL 596
+ + ++A G ++A+ L
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKL 143
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 191/443 (43%), Gaps = 39/443 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
PE + L++ LV+ ++WD L ++ + D ++ LV R+ + L
Sbjct: 941 PEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKL 1000
Query: 175 LQVFITDGEIALLAF-NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
++ G I + F N + GY + +L+ +M++ G + Y ++ K
Sbjct: 1001 IEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGK 1060
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
GD EK+ +LFLE + R + +Y + D+L A +A+ + M G D
Sbjct: 1061 KGDLEKIGSLFLEMRKRGFSP---NVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPD 1117
Query: 294 PSIYASLICSFASITEVKLAEELFKEA--------------------------------- 320
+ +LI V+ AE +EA
Sbjct: 1118 IITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLV 1177
Query: 321 EEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E G P+V L++ + G V + L V E M ++ I +++G K+R
Sbjct: 1178 EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKR 1237
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
AA + E+++ + P + YA++I+ + R A K+F M+ KG +V+ +
Sbjct: 1238 MLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCN 1297
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+M+ Y + G + +A+ ++ M+ GC P+ + Y +++ + + NL + +M +R
Sbjct: 1298 AMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKR 1357
Query: 499 KVTPDKVSYTTVISAYNRAREFD 521
K P+ V+Y+++I+ Y + + D
Sbjct: 1358 KCKPNVVTYSSLINGYCKTGDTD 1380
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 1/233 (0%)
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK-GMLRDPEVCLKLVLMYI 340
+ M G + +L+ ++A + A E+ + E+ G L + C +L+ + +
Sbjct: 895 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLV 954
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
E+ + + + M + +C +V G R +K+ E GCIP V
Sbjct: 955 EQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVV 1014
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
Y +I+ YCR + + EM+ GF +V Y S++ GK G + L +M
Sbjct: 1015 FYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM 1074
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ +G PNV IYNS++D ++ Q + K+M PD +++ T+I+
Sbjct: 1075 RKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITG 1127
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%)
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
++Y +L L K A +M EK + D +YA+LI F + A ++F+
Sbjct: 1223 VNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 1282
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E KG+ D C ++ Y + G++ + + + +M+ + +++G++K+
Sbjct: 1283 FMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 1342
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A++ +I + C P VTY+S+IN YC+ AE +F MQ + VV Y+
Sbjct: 1343 NLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYT 1402
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
++ K ++ A M C PN
Sbjct: 1403 ILIGSLFKKDKVLRAGLYFETMLLNHCSPN 1432
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 148/375 (39%), Gaps = 30/375 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQE--LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
PD F + +HG++ + E + + E + P+ + +LI L + + +
Sbjct: 1186 PDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDV----NIYNVLISGLCKKRMLPA 1241
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMG 194
++ E+ NV PD + L+ +R+ A + + G +++ N+ +
Sbjct: 1242 AKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIK 1301
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
GY + M IL M+ G + D Y ++ Y K G+ AL C K
Sbjct: 1302 GYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLN--GALRWLCDMIKRKC 1359
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
P + Y L + K+G A F +M+ + + + Y LI S +V A
Sbjct: 1360 KP-NVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAG 1418
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
F+ ML + + L Y+ GL T V+ S+ C + + V+G
Sbjct: 1419 LYFET-----MLLNHCSPNDVTLHYLVNGLTSCTPCVINSI---------CCNTSEVHGK 1464
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
A + V+++L+ P Y +II + CR + +A M +KG+
Sbjct: 1465 D------ALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNP 1518
Query: 435 VAYSSMVAMYGKTGR 449
+ + S++ + G+
Sbjct: 1519 ITFLSLLYGFCSVGK 1533
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 140/300 (46%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
A+ F M G++ + Y +L+ E+ A +F + G L + +L+
Sbjct: 384 AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIR 443
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
Y G EK + ++ +M + + I+ G+ A++V E + + GC P
Sbjct: 444 GYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQP 503
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
+ +Y +I+ +C+I+ A +F EM +G V Y+++++ Y K ++ A ++
Sbjct: 504 DEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARML 563
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+MK GC PNV YN L+ + N E+L K M K++PD V+Y+TVI+
Sbjct: 564 ERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNN 623
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ ++ +N+ +G + + ++ + ++EE ++ ++K +G DE Y
Sbjct: 624 GAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTY 683
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/468 (20%), Positives = 189/468 (40%), Gaps = 44/468 (9%)
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
++ SC + A L +F G ++ L + + + NKL+M + + Y ++ G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223
Query: 217 IVLDSGCYCQIMEAYYKIG---DSEKV-----------------AALFLECKSRKLDST- 255
+ + Y ++ A K G D+E + + + C++R LDS
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283
Query: 256 -----------PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ Y L + L SGR EAL F +M G+L + + I +
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE----EGLVEKTLDVVESMKNAKL 360
+ ++ A ++F + ++KG C V Y + + + + M +
Sbjct: 344 CDMGRIEDAWKIFIDMKKKG-------CKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGV 396
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ A++N + +A+ V+ + GC+P +Y +I YC I KA
Sbjct: 397 VPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMS 456
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+ M + +V Y+ ++ Y +G A+ ++ MKA GC+P+ W Y L+
Sbjct: 457 MLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFC 516
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+ + ++ EM R + P++V+YT +IS Y + + D + + +G +
Sbjct: 517 KISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQ 576
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+++ +K + +L + M E D Y + +N L + G
Sbjct: 577 TYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNG 624
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/493 (20%), Positives = 215/493 (43%), Gaps = 18/493 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+A + + ++G+ + E A D+ +E + P T I L + +
Sbjct: 296 PNAATYSTLINGLCNSGRVNE-ALDFISEMTRHGVL-PTVHTFTAPIVALCDMGRIEDAW 353
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+ D K P+ +T + L++ R ++A L DG + + +N+ M
Sbjct: 354 KIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVL 410
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ S ++V+ M G + ++ Y +++ Y IGD+EK ++ + L P
Sbjct: 411 MENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSML----TNMLKGRP 466
Query: 257 FSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
T + Y I+ SG A++ MK G D Y LI F I++++LA
Sbjct: 467 TPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASG 526
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F E ++G+ + L+ Y ++ ++ ++E MK + + + +++G +
Sbjct: 527 MFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLT 586
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K+ + A ++ + ++ + P VTY+++IN C A ++F +M + G +
Sbjct: 587 KQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLH 646
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
YSS++ G+ GR+ +A + +++K +G P+ Y ++++ + + + EM
Sbjct: 647 TYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEM 706
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR---MNGGVIDRAIAGIMVGVFSKL 552
P +Y +I + V N + +I++ + ++ SKL
Sbjct: 707 INAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLS---SKL 763
Query: 553 SQIE-ELVKLLQD 564
++++ EL + L D
Sbjct: 764 AELDFELSRQLYD 776
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/462 (19%), Positives = 181/462 (39%), Gaps = 69/462 (14%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P+ ++ + G T++ N K P P T ++I+ S D
Sbjct: 432 LPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPT--PTLVTYNIIIKGYCDSGDTDVA 489
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
+ + E K PD + + L++ + K ++A+ + + G + + + + G
Sbjct: 490 IRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISG 549
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD---SEKVAALFLECKSRKL 252
Y K + E+MK +G + Y ++ K + +E++ + LE K
Sbjct: 550 YCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISP- 608
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D +ST + + L +G AL+ F M + G L + Y+SLI + V+
Sbjct: 609 DVVTYST-----VINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEE 663
Query: 313 AEELFKEAEEKGMLRDP-------EVCL-------------------------------- 333
AEE+F E +++G++ D EVC+
Sbjct: 664 AEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIK 723
Query: 334 ---------KLVLM-------YIEEGLVEKTLDVVESMKNAKL--KISDCISCAIVNGFS 375
KLV + ++ ++ K + V S K A+L ++S + A+++ S
Sbjct: 724 GLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLS 783
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ ++ A +Y ++SQ P Q TY + + R A VF M + + +
Sbjct: 784 RSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLT 843
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
Y ++ + R ++A ++ KM ++ + ++ L++
Sbjct: 844 GYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILIN 885
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 128/620 (20%), Positives = 253/620 (40%), Gaps = 63/620 (10%)
Query: 12 SSALINTTYTCMKKSYRHTLFSTCKAFPFVTVNPSSIINHRFFQVNASTNFPTIELNRDS 71
+S + + + +K + +LF+ P + SS ++H+ V + NF
Sbjct: 4 TSKTVPSASSIVKPNLSSSLFTHSPTIPSSNPHFSSAVHHKSLNV-SPQNF--------- 53
Query: 72 HHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSK 131
T + ++ FLH T A+ +++ P S+ L+ L + K
Sbjct: 54 --NTPISFQQQLSMFLHNCKTGNITATQAFQFFH-LMMYSNPTPPLSSFTHLLSGLAKIK 110
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFN 190
+ + L ++ + PD T + L+ + ++ + G I ++ +
Sbjct: 111 HYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYT 170
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ + G H L++ +M+ G ++ Y +M+ + G+ L E +
Sbjct: 171 TLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLN- 229
Query: 251 KLDSTPFSTHM------YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
DS+ + + Y I+ D+L K R EA F +MK +G+ Y SLI F
Sbjct: 230 --DSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGF 287
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKI 362
+ + A+ LF E +G+ P V VL+ + +EG V + D++E M +
Sbjct: 288 CCGGKWEEAKRLFNEMVNQGV--QPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVP 345
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
+ +++ GF +A +++ + S+GC P + Y +IN YC+ + +A K++
Sbjct: 346 NLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLY 405
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY---------- 472
M Q G V Y +++ + G++ DA L MK G +++IY
Sbjct: 406 NGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKN 465
Query: 473 -------------------------NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
N L+D +A L +L++++ + ++ PD V+Y
Sbjct: 466 GCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTY 525
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+I + R + + + NG D+ ++ F + ++E++V+LL M
Sbjct: 526 NIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 585
Query: 568 EGTKLDER-LYHSAMNALRD 586
LD L H+ +AL++
Sbjct: 586 RDVSLDVNILRHNRRHALQN 605
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/511 (19%), Positives = 218/511 (42%), Gaps = 34/511 (6%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
L+ + + +P P S+ V + +++ +S + ++ H C
Sbjct: 18 NLSSSLFTHSPTIPSSNPHFSSAVHHKSLNVSPQNFNTPISFQQQLSMF-----LHNCKT 72
Query: 158 LVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGI 217
+ +A +F + ++ L +F + G K+ Y +Y +M+ +GI
Sbjct: 73 GNITATQAFQF-----FHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGI 127
Query: 218 VLDS-------GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
D C C + ++G+ V A L + D ++T + K LC
Sbjct: 128 SPDCCTLNILLNCLCNV----NRVGEGLAVMAGILR-RGYIPDIVTYTT-LIKGLC---- 177
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASL---ICSFASIT-EVKLAEELFKEAEEKGML 326
R +A F M++ G + Y +L +C +I+ +KL +E+ ++ G+
Sbjct: 178 MEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGIN 237
Query: 327 RDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
P V +++ ++ ++ D+ E MK + + ++++GF + A
Sbjct: 238 FKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAK 297
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+++ ++++QG P VT+ +I+ C+ +A+ + M Q+G ++ Y+S++ +
Sbjct: 298 RLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGF 357
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
G + A L M +KGCEP+V Y L++ + + + + KL+ M + PD
Sbjct: 358 CLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDV 417
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+Y +++ + + K + ++ G D I GI + K + E ++L
Sbjct: 418 KTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNK 477
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
+KS KLD ++ ++ L AG +++ W
Sbjct: 478 LKSYNIKLDIECFNCLIDGLCKAG-KLETAW 507
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/475 (20%), Positives = 206/475 (43%), Gaps = 66/475 (13%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + + + G+ KD + + A++ Y E ++ F P+ T +I S +W
Sbjct: 247 PNVVIYSAIIDGLWKDGRHSD-AHNLYTEMQEKGIF-PDLFTYNCMIDGFCSSGRWSEAQ 304
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
L ++ + P+ T S L+ + V+ RKF A L + G I + +NS + G+
Sbjct: 305 RLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGF 364
Query: 197 ---NKL----HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
N+L HM+Y M + G D + +++ Y C +
Sbjct: 365 CKQNRLDAAEHMFYV-------MATKGCSPDVFTFNTLIDGY---------------CGA 402
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
+++D + + +M E G++ D + Y +LI F + +
Sbjct: 403 KRID-----------------------DGTELLHEMTETGLVADTTTYNTLIHGFCLVGD 439
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS------ 363
+ A +L ++ G+ D C L+ + G ++ L++ ++M+ +K+ +
Sbjct: 440 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFN 499
Query: 364 ----DCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
D + I ++G + A ++Y+++ +G +P +TY+S+IN C+ + +A
Sbjct: 500 GVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEA 559
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
++F M K F VV ++++V+ Y K GR+ D + L +M +G + Y +L+
Sbjct: 560 TQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHG 619
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+ N+ +++EM V PD ++ ++++ E V + +M+
Sbjct: 620 FRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQMS 674
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/520 (21%), Positives = 213/520 (40%), Gaps = 22/520 (4%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F + LHG+ + + E A D +++ RP T L+ L + + V
Sbjct: 145 PDVVTFSTLLHGLCVEDRVSE-ALDLFHQM-----CRPNVVTFTTLMNGLCREGRVVEAV 198
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGG 195
+L + + P+ T +V + A LL+ I ++ +++ + G
Sbjct: 199 ALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDG 258
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K + +Y +M+ GI D Y +++ + G + L E RK++
Sbjct: 259 LWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPN 318
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y L ++ K + FEA + + +M +GI+ + Y S+I F + AE
Sbjct: 319 VVT---YSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEH 375
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F KG D L+ Y ++ +++ M L +++GF
Sbjct: 376 MFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFC 435
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ-------- 427
AA+ + +Q+IS G P VT ++++ C A ++F MQ+
Sbjct: 436 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 495
Query: 428 ---KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
G + V Y+ +++ G+ +A L +M +G PN Y+S+++ +
Sbjct: 496 RPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSR 555
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
L + +++ M + +PD V++ T++S Y +A D ++ + E G V D
Sbjct: 556 LDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYIT 615
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ F K+ I + + Q+M S G D S + L
Sbjct: 616 LIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVL 655
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 174/412 (42%), Gaps = 22/412 (5%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS-------GCYCQIMEAYYKIGDS 237
+++ FN MG ++ I +Y+KM+ I D C+C + + +
Sbjct: 76 SVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTF 135
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
K+ L + D FST ++ + + R EAL F M ++ ++
Sbjct: 136 GKITKLGFQ-----PDVVTFSTLLHGLCVED-----RVSEALDLFHQMCRPNVVTFTTLM 185
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
L C + E A L E G+ + +V + G L+++ M+
Sbjct: 186 NGL-CREGRVVE---AVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEE 241
Query: 358 -AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ +K + I AI++G K + A +Y ++ +G P TY +I+ +C +S
Sbjct: 242 MSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWS 301
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+A+++ EM ++ + VV YS+++ Y K + +A L +M +G PN YNS++
Sbjct: 302 EAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMI 361
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D + L E ++ M + +PD ++ T+I Y A+ D + +E G V
Sbjct: 362 DGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLV 421
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
D ++ F + + + L Q M S G D ++ ++ L D G
Sbjct: 422 ADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 473
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 196/467 (41%), Gaps = 45/467 (9%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VPD ++ ++ K + A++Y++E K +P T LI +
Sbjct: 356 VPDIITYNGLINCYCKFEKMPR-AFEYFSEMKN-NGLKPNVVTYSTLIDAFCKEGMMQGA 413
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
+ L D + +LP+ T + L+ + +A A LL
Sbjct: 414 IKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN-------------------- 453
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
M AG+ L+ Y +++ K G + +F +S D
Sbjct: 454 --------------DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVF---RSMLKDGIS 496
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---CSFASITEVKLA 313
+ +Y L K+ R +A+K + M E I D +Y S+I CS + E KL
Sbjct: 497 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL- 555
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+ +E + +G+ +P + ++ Y + G L+ + M++ ++ + C +++G
Sbjct: 556 --ILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDG 613
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
K AV + +++S G P Y S+I+ C+ A+K+F EMQ +G
Sbjct: 614 LCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPD 673
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ A+++++ K G +++A+ L+++M E ++ +Y SL+ + L Q K +
Sbjct: 674 ITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFN 733
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
EM + + P++V ++ Y + + D ++ NE G + + A
Sbjct: 734 EMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESA 780
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 150/332 (45%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S Y ++ D L K G + + F M+E G+ D Y SLI + + ++ LF
Sbjct: 288 SVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLF 347
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E ++ G + D L+ Y + + + + MKN LK + +++ F K
Sbjct: 348 NEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKE 407
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A+K++ + G +P + TY S+I+A C+ ++A K+ +M Q G +V Y
Sbjct: 408 GMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTY 467
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++++ K GR+ +A + M G PN +Y +L+ + +A+ + K+ K+M
Sbjct: 468 TALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 527
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ PD + Y ++I + R+ + E + G + I+ ++ + K + +
Sbjct: 528 CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSD 587
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ Q+M+ G + Y ++ L AG+
Sbjct: 588 ALNFFQEMQDVGVEATIVTYCVLIDGLCKAGI 619
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 200/456 (43%), Gaps = 4/456 (0%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T LI + + + SL + K +PD T + L+ + K A
Sbjct: 322 PDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEY 381
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+G + ++ +++ + + K M I ++ M+ G++ + Y +++A K
Sbjct: 382 FSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCK 441
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G+ + L + + Y L D L K+GR EA + FR M + GI +
Sbjct: 442 AGNLTEAWKLLNDMLQA---GVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPN 498
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+Y +L+ + ++ A ++ K+ E + D + ++ + + +E+T ++E
Sbjct: 499 QQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILE 558
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
MK+ + + IS I++ + K A+ ++++ G VTY +I+ C+
Sbjct: 559 EMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAG 618
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ A F M G V Y+S++ K I A L +M+ +G P++ +
Sbjct: 619 IVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFT 678
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+L+D + + NL++ L M + D YT+++S +++ E KF+NE
Sbjct: 679 ALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEK 738
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
G + + + ++ + K Q++E ++L +M+ G
Sbjct: 739 GILPEEVLCICLLREYYKRGQLDEAIELKNEMERMG 774
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 128/258 (49%), Gaps = 2/258 (0%)
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCA-IVNGFSKRRGYWAAVKVYEQLISQGCI 396
+++E GL+E+ + M+N + + SC +++ SK K + +I G
Sbjct: 228 VFVELGLLEEANECFSRMRNFR-TLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIA 286
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P TY +I+ C+ + ++F++M++ G VV Y+S++ YGK G + + L
Sbjct: 287 PSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASL 346
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+MK GC P++ YN L++ + + + + + + + EM+ + P+ V+Y+T+I A+ +
Sbjct: 347 FNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCK 406
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+K + + R G + + ++ K + E KLL DM G KL+
Sbjct: 407 EGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 466
Query: 577 YHSAMNALRDAGLQMQAQ 594
Y + ++ L AG ++A+
Sbjct: 467 YTALLDGLCKAGRMIEAE 484
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 168/372 (45%), Gaps = 5/372 (1%)
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFE 277
V SG + + + ++G E+ F + R + P L L KSG
Sbjct: 216 VSGSGVFDVLFSVFVELGLLEEANECF--SRMRNFRTLP-KARSCNFLLHRLSKSGNGQL 272
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
KFF DM GI Y +I +++ + LF + E G+ D L+
Sbjct: 273 VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLID 332
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
Y + G +E+ + MK+ + D I+ ++N + K A + + ++ + G
Sbjct: 333 GYGKVGSLEEVASLFNEMKDVGC-VPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLK 391
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P VTY+++I+A+C+ + A K+F++M++ G Y+S++ K G + +A L
Sbjct: 392 PNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKL 451
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ M G + N+ Y +L+D +A + + E++++ M + ++P++ YT ++ Y +
Sbjct: 452 LNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIK 511
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
A + +K + D + G ++ ++EE +L++MKS G + +
Sbjct: 512 AERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVI 571
Query: 577 YHSAMNALRDAG 588
+ ++A AG
Sbjct: 572 STTIIDAYFKAG 583
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 194/446 (43%), Gaps = 8/446 (1%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYS 204
+ LP A +C+ L+ ++ ++ I G ++ +N + K +
Sbjct: 248 FRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLEN 307
Query: 205 TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKI 264
+ ++ +M+ G+ D Y +++ Y K+G E+VA+LF E K + P Y
Sbjct: 308 SRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD--VGCVP-DIITYNG 364
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L + K + A ++F +MK G+ + Y++LI +F ++ A +LF + G
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTG 424
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+L + L+ + G + + ++ M A +K++ A+++G K A
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 484
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+V+ ++ G P Q Y ++++ Y + A K+ +M + ++ Y S++ +
Sbjct: 485 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 544
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
++ + ++ +MK++G N I +++D + +A ++EM+ V
Sbjct: 545 CSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATI 604
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
V+Y +I +A ++ V ++ G + A+ ++ K + IE KL +
Sbjct: 605 VTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDE 664
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQ 590
M+ G D +A AL D L+
Sbjct: 665 MQCRGMTPD----ITAFTALIDGNLK 686
>gi|307105412|gb|EFN53661.1| hypothetical protein CHLNCDRAFT_58444 [Chlorella variabilis]
Length = 1131
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 135/259 (52%), Gaps = 12/259 (4%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
A+ +M+++GI + +++L+ + KLA +++++ + G + L+
Sbjct: 310 AMALAEEMRDRGIERNVHTFSALMNVCIKCGQYKLALDVYRDMQAAGCPANVVTYNTLID 369
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKI------SDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
+Y + G E+ L V+E MK +++ + I+C N + + A++VYEQ+
Sbjct: 370 VYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQE------ALRVYEQMA 423
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+ P TY ++I+A+ + K VF EM QKG ++ V+ YSS+++ K G +
Sbjct: 424 ASSHPPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAGEWK 483
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
A+ L +M+ +GC PNV YNSL+ + + +++++M+R+ PD VSYT +I
Sbjct: 484 LALQLFEEMRGEGCVPNVISYNSLITACAQGAQWEKAAEVFEQMQRQGCRPDVVSYTALI 543
Query: 512 SAYNRAREFDMCVKFYNEF 530
AY R ++ + + E
Sbjct: 544 QAYERGGQWRRALAAFEEM 562
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 123/249 (49%), Gaps = 5/249 (2%)
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ + + E M++ ++ + A++N K Y A+ VY + + GC VTY ++I
Sbjct: 309 RAMALAEEMRDRGIERNVHTFSALMNVCIKCGQYKLALDVYRDMQAAGCPANVVTYNTLI 368
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
+ Y + + +A V +M+++ +++++ + + ++A+ + +M A
Sbjct: 369 DVYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMAASSHP 428
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
PN YN+L+ H + +L +V ++KEM ++ ++Y+++ISA +A E+ + ++
Sbjct: 429 PNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAGEWKLALQL 488
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ E R G V + ++ ++ +Q E+ ++ + M+ +G + D Y + + A
Sbjct: 489 FEEMRGEGCVPNVISYNSLITACAQGAQWEKAAEVFEQMQRQGCRPDVVSYTALIQAYER 548
Query: 587 AGLQMQAQW 595
G QW
Sbjct: 549 GG-----QW 552
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/328 (19%), Positives = 147/328 (44%), Gaps = 7/328 (2%)
Query: 269 LGKSGRAFEALKFFRDMKEKGI------LEDPSIYASLICSFASITEVKLAEELFKEAEE 322
LGK G + F ++ G L D + S+I + + ++ A L +E +
Sbjct: 260 LGKGGLPHRGAQLFDLLRRLGPGSPLAPLLDEFTFTSMISNCVAQQDLGRAMALAEEMRD 319
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
+G+ R+ L+ + I+ G + LDV M+ A + +++ + K +
Sbjct: 320 RGIERNVHTFSALMNVCIKCGQYKLALDVYRDMQAAGCPANVVTYNTLIDVYGKSGQWEE 379
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+ V EQ+ + P T+ +++ A + +A +V+ +M Y+++++
Sbjct: 380 ALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMAASSHPPNTTTYNALIS 439
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ K G + + + +M KGCE +V Y+SL+ +A + +L++EM P
Sbjct: 440 AHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAGEWKLALQLFEEMRGEGCVP 499
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ +SY ++I+A + +++ + + + + G D ++ + + Q +
Sbjct: 500 NVISYNSLITACAQGAQWEKAAEVFEQMQRQGCRPDVVSYTALIQAYERGGQWRRALAAF 559
Query: 563 QDM-KSEGTKLDERLYHSAMNALRDAGL 589
++M ++ D +Y++ ++ L + G+
Sbjct: 560 EEMIRARPCAPDSIVYNTIIDVLWETGV 587
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 145/361 (40%), Gaps = 73/361 (20%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
T +I V + ++L+E+ + + + HT S L+ C++ ++K+A + +
Sbjct: 293 TFTSMISNCVAQQDLGRAMALAEEMRDRGIERNVHTFSALMNVCIKCGQYKLALDVYRDM 352
Query: 179 ITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
G A ++ +N+ + Y K + + V E+MK I + + +M A
Sbjct: 353 QAAGCPANVVTYNTLIDVYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSNQW 412
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
++ ++ + + S P +T Y L + K G + L F++M +KG Y
Sbjct: 413 QEALRVYEQMAA---SSHPPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITY 469
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
+SLI + E KLA +LF+E +G C+ V+ Y
Sbjct: 470 SSLISACEKAGEWKLALQLFEEMRGEG-------CVPNVISY------------------ 504
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
S +CA + K A +V+EQ+ QGC P V+Y ++I AY R + +
Sbjct: 505 ----NSLITACAQGAQWEK------AAEVFEQMQRQGCRPDVVSYTALIQAYERGGQWRR 554
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A F EM ++A+ C P+ +YN+++D
Sbjct: 555 ALAAFEEM----------------------------------IRARPCAPDSIVYNTIID 580
Query: 478 M 478
+
Sbjct: 581 V 581
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 211/492 (42%), Gaps = 12/492 (2%)
Query: 107 AKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRAR 166
++K+P P T ++++ L + DS +S+ D + +P++ L+ S +
Sbjct: 204 SRKIP---PTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCN 260
Query: 167 KFKIANTLLQ-VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
+ A LL+ +F+ FN + G K + +M G D Y
Sbjct: 261 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYG 320
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+M KIG + LF + K S F+T ++ + GR +A DM
Sbjct: 321 YLMNGLCKIGRVDAAKDLFY--RIPKPTSVIFNTLIHGFV-----THGRLDDAKAVLSDM 373
Query: 286 -KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
GI+ D Y SLI + V LA E+ ++ KG + LV + + G
Sbjct: 374 VTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGK 433
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+++ +++ M LK + +++ F K AV+++ ++ +GC P T+ S
Sbjct: 434 IDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 493
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I+ C + A + +M +G V Y++++ + + G I++A LV +M +G
Sbjct: 494 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 553
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+ YNSL+ RA + + L+++M R + P +S +I+ R+ + V
Sbjct: 554 SLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAV 613
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+F E + G D ++ + +IE+ + + + +++EG D Y++ M+ L
Sbjct: 614 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWL 673
Query: 585 RDAGLQMQAQWL 596
G A L
Sbjct: 674 CKGGFVYDACLL 685
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 189/444 (42%), Gaps = 58/444 (13%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE------FRPEKSTLKLLIRYLVQS 130
VPDA+ F+ + G+ K +D NEA K+ F P+ T L+ L +
Sbjct: 278 VPDAETFNDVILGLCK--------FDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKI 329
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLA 188
+ D+ ++D P + + L+ V + A +L +T I +
Sbjct: 330 GRVDA----AKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 385
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+NS + GY K + + V M++ G + Y +++ + K+G ++ L E
Sbjct: 386 YNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMS 445
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ D +T + L + K R EA++ FR+M KG D + SLI +
Sbjct: 446 A---DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 502
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
E+K A L LRD I EG+V T+
Sbjct: 503 EIKHALWL---------LRD----------MISEGVVANTVTYN---------------- 527
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++N F +R A K+ +++ QG + ++TY S+I CR KA +F +M +
Sbjct: 528 TLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 587
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G ++ + ++ ++G + +A+ +M +G P++ +NSL++ RA +
Sbjct: 588 GLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 647
Query: 489 EKLWKEMERRKVTPDKVSYTTVIS 512
++++++ + PD V+Y T++S
Sbjct: 648 LTMFRKLQAEGIPPDTVTYNTLMS 671
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 176/446 (39%), Gaps = 71/446 (15%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKI-----------------------------------G 235
+MK GIV + IM Y K G
Sbjct: 130 QMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSG 189
Query: 236 DSEKVAA-LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
+ KVAA +F + SRK+ T F+ + ++ +L AL RDM + G + +
Sbjct: 190 NCHKVAANVFYDMLSRKIPPTLFT---FGVVMKALCAVNEVDSALSVLRDMTKHGCVPNS 246
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
IY +LI S + V A +L +E G + D E ++L + + + +V
Sbjct: 247 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 306
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY--------------------------- 387
M D ++NG K AA ++
Sbjct: 307 MLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDA 366
Query: 388 -----EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
+ + S G +P TY S+I Y + L A +V +M+ KG V +Y+ +V
Sbjct: 367 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVD 426
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ K G+I +A L+ +M A G +PN +N L+ + + + ++++EM R+ P
Sbjct: 427 GFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 486
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D ++ ++IS E + + G V + ++ F + +I+E KL+
Sbjct: 487 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 546
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAG 588
+M +G+ LDE Y+S + L AG
Sbjct: 547 NEMVFQGSLLDEITYNSLIKGLCRAG 572
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 147/332 (44%), Gaps = 5/332 (1%)
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L K R EA K M +G D Y L+ I V A++LF + +
Sbjct: 290 GLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSV- 348
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD-CISCAIVNGFSKRRGYWAAVKV 386
+ L+ ++ G ++ V+ M + + D C +++ G+ K+ A++V
Sbjct: 349 ---IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEV 405
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ ++GC P +Y +++ +C++ +A + EM G V ++ +++ + K
Sbjct: 406 LRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCK 465
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
RI +A+ + +M KGC+P+V+ +NSL+ ++ L ++M V + V+
Sbjct: 466 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 525
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y T+I+A+ R E K NE G ++D ++ + ++++ L + M
Sbjct: 526 YNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKML 585
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+G + +N L +G+ +A Q+
Sbjct: 586 RDGLVPSSISCNILINGLCRSGMVEEAVEFQK 617
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 79/413 (19%), Positives = 164/413 (39%), Gaps = 74/413 (17%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---------------- 301
S +Y++L LG +G + MK++GI+ S++ S++
Sbjct: 104 SFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLM 163
Query: 302 --------C-----SFASITEV-------KLAEELFKEAEEKGM---LRDPEVCLKLVLM 338
C S+ + E+ K+A +F + + + L V +K L
Sbjct: 164 LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK-ALC 222
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+ E V+ L V+ M + I +++ SK A+++ E++ GC+P
Sbjct: 223 AVNE--VDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 280
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFD--------------------------- 431
T+ +I C+ ++A K+ M +GF
Sbjct: 281 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFY 340
Query: 432 ----KCVVAYSSMVAMYGKTGRIRDAMWLVAKM-KAKGCEPNVWIYNSLMDMHGRAKNLR 486
V +++++ + GR+ DA +++ M + G P+V YNSL+ + + +
Sbjct: 341 RIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVG 400
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
++ ++M + P+ SYT ++ + + + D NE +G + ++
Sbjct: 401 LALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLI 460
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
F K +I E V++ ++M +G K D ++S ++ L + A WL ++
Sbjct: 461 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 513
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 103/240 (42%), Gaps = 9/240 (3%)
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
+KG +Y LI S E K + L + +++G++ + + ++ Y + G
Sbjct: 98 QKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPG 157
Query: 347 KTLDVVESMKNA-----KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
+T ++ M+N K + + +V+G + A V+ ++S+ P T
Sbjct: 158 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHK----VAANVFYDMLSRKIPPTLFT 213
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ ++ A C + A V +M + G V Y +++ K R+ +A+ L+ +M
Sbjct: 214 FGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 273
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
GC P+ +N ++ + + + K+ M R TPD ++Y +++ + D
Sbjct: 274 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVD 333
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 115/528 (21%), Positives = 228/528 (43%), Gaps = 52/528 (9%)
Query: 39 PFVTVNPSSIINHRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQ--- 95
PFV ++P+S ++H F ++ A+ + +E NR S + +A + L ++ P
Sbjct: 31 PFV-LSPASSVSHHFTKLKATRSRKRLE-NRVS--AVSKSEASGMNGRLQQIVSTPNGDL 86
Query: 96 ----TQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPD 151
+ + + N ++ EF + +R LV++ + + + E +PD
Sbjct: 87 NGIGMESSSPNGVNGSRSFEEF-----ASNIHLRKLVRNGELEEGLKFLERMIYQGDIPD 141
Query: 152 AHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYE 210
C+ L+ R+ K + A ++++ G + ++ +N +GGY K + V E
Sbjct: 142 VIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLE 201
Query: 211 KMKSAGIVL----------DSG----------------CYCQIMEAYYKI----GDSEKV 240
+M A V+ DSG CY ++ I DS
Sbjct: 202 RMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVG 261
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
A+ L + RK P Y +L + + K GR EA+KF +M G + + +
Sbjct: 262 QAMKLLDEMRKKGCKP-DVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNII 320
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNA 358
+ S S AE L + KG P V +L+ + L+ + +DV+E M
Sbjct: 321 LRSMCSTGRWMDAERLLADMLRKGC--SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKH 378
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+ +++GF + + A++ E ++S+GC P VTY +++ A C+ A
Sbjct: 379 GCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAA 438
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
++ ++ KG ++ Y++++ K G+ A L+ +M+ KG +P++ Y++L+
Sbjct: 439 VEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRG 498
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
G + + K++ +ME + P V+Y ++ +A++ + F
Sbjct: 499 LGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDF 546
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 159/383 (41%), Gaps = 38/383 (9%)
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
SR + + H+ K++ ++G E LKF M +G + D SLI F
Sbjct: 102 SRSFEEFASNIHLRKLV-----RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSG 156
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK------------ 356
+ + A + + E G + D L+ Y + G ++K L V+E M
Sbjct: 157 KTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTIL 216
Query: 357 -----NAKLK--------------ISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCI 396
+ KLK D I+ I + G A+K+ +++ +GC
Sbjct: 217 RSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCK 276
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P VTY +IN C+ +A K M G V+ ++ ++ TGR DA L
Sbjct: 277 PDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERL 336
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+A M KGC P+V +N L++ R + L + + ++M + P+ +SY ++ + +
Sbjct: 337 LADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQ 396
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++ D +++ G D ++ K + + V++L + S+G
Sbjct: 397 EKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLIT 456
Query: 577 YHSAMNALRDAG-LQMQAQWLQQ 598
Y++ ++ L G + A+ L++
Sbjct: 457 YNTVIDGLTKVGKTEYAAELLEE 479
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 122/296 (41%), Gaps = 4/296 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P+ T +LI + + + D + + +Y P+ T + ++ S ++ A
Sbjct: 276 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAER 335
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
LL + G +++ FN + + + I V EKM G + +S Y ++ +
Sbjct: 336 LLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFC 395
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+ ++ A +LE + T Y L +L K G+A A++ + KG
Sbjct: 396 QEKKMDR-AIEYLEIMVSRGCYPDIVT--YNTLLTALCKDGKADAAVEILNQLSSKGCSP 452
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
Y ++I + + + A EL +E KG+ D L+ EG V++ + +
Sbjct: 453 VLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIF 512
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
M+ +K S AI+ G K + A+ ++ +GC P + TY +I
Sbjct: 513 HDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 219/483 (45%), Gaps = 47/483 (9%)
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIA 185
L+++K++ + +SLS+ + + PD TC+ L+ + K + ++ + G
Sbjct: 68 LLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPD 127
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+ F + G + + ++K+ + G LD Y ++ ++G+++ L
Sbjct: 128 AVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLL- 186
Query: 246 ECKSRKLDSTPFSTH--MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
R++D + MY + DS+ K +A + +M K I D Y+SLI
Sbjct: 187 ----RRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISG 242
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESM--KNAK 359
F + ++K A +LF + +P V +L+ + +EG V + +V+ M KN K
Sbjct: 243 FCVVGKLKYAVDLFNRMISDNI--NPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVK 300
Query: 360 LKI--------------------------------SDCISCAI-VNGFSKRRGYWAAVKV 386
L + D S +I +NGF K + A+K+
Sbjct: 301 LDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKL 360
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+E++ + P VTY S+++ C+ S A ++ EM +G ++ Y+S++ K
Sbjct: 361 FEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICK 420
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
+ A+ L+ K+K KG +P+++ Y L++ + L +K+++++ + +P+ +
Sbjct: 421 NNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYT 480
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
YT++I+ + FD + ++ + NG + + I++ + + ++ KLL++M
Sbjct: 481 YTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMI 540
Query: 567 SEG 569
+ G
Sbjct: 541 ARG 543
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 180/412 (43%), Gaps = 11/412 (2%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ F +G K Y + + + ++M+ GI D +M + ++G + ++F +
Sbjct: 59 IEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAK 118
Query: 247 C--KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
K D+ F+ IL L G +AL F + +G D Y +LI
Sbjct: 119 ILKKGYHPDAVTFT-----ILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGL 173
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ E K A +L + + G L P V + ++ ++ LV D+ M + ++
Sbjct: 174 CRVGETKAAVQLLRRVD--GKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISP 231
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
++++GF AV ++ ++IS P T++ +I+ +C+ +A+ V
Sbjct: 232 DVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVL 291
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
M +K VV Y+S++ Y ++ A L M +G P+VW Y+ +++ +
Sbjct: 292 AVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKI 351
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
K + + KL++EM +++ P+ V+Y +++ ++ ++ +E G +
Sbjct: 352 KMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITY 411
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
++ K + +++ + LL +K +G + D Y +N L G AQ
Sbjct: 412 NSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQ 463
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 156/339 (46%), Gaps = 1/339 (0%)
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
K + P + KIL SL K+ + AL + M+ GI D L+ F+ +
Sbjct: 50 HKNNPIPPAIEFGKIL-GSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGH 108
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
+K + +F + +KG D L+ +G V K L + + ++
Sbjct: 109 IKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGT 168
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++NG + AAV++ ++ + P V Y++II++ C+ L + A ++ EM K
Sbjct: 169 LINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKR 228
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
VV YSS+++ + G+++ A+ L +M + PNV+ ++ L+D + +R+ +
Sbjct: 229 ISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAK 288
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+ M ++ V D V+Y +++ Y ++ + +N G D IM+ F
Sbjct: 289 NVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGF 348
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
K+ ++E +KL ++M + + Y+S ++ L +G
Sbjct: 349 CKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSG 387
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 4/213 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ + ++I + K D + L E+ + P+ T + LV ++ + A L
Sbjct: 336 PDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALEL 395
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ G+ + ++ +NS + K + I++ K+K GI D Y ++ K
Sbjct: 396 VDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCK 455
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G + +F + + ++ Y L + G E L MK+ G + +
Sbjct: 456 VGRLDDAQKVFEDLLVKGYSPNIYT---YTSLINGFCNKGFFDEGLAMLSKMKDNGCIPN 512
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGML 326
Y LI S E AE+L +E +G+L
Sbjct: 513 AITYEILIHSLFEKDENDKAEKLLREMIARGLL 545
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 192/434 (44%), Gaps = 6/434 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVY 209
P + + ++ RAR+ IA + F +G + FN+ MG Y + + +
Sbjct: 186 PASRAVAVVLGVLGRARQDSIAEEVFLRFAGEGA-TVQVFNAMMGVYARSGRFDDARQLL 244
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+ M GI D + ++ A K G AL L + R+ P Y L +
Sbjct: 245 DTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRP-DVITYNTLISAC 303
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
+S +A+ F DM D Y +++ + + AE LF+E EKG + D
Sbjct: 304 SQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDA 363
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
L+ + +EG V+K E + A K ++ +++ + K AV +Y++
Sbjct: 364 ITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDE 423
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ + GC P VTY +I++ ++ ++A KV +M G ++A+S+++ Y K GR
Sbjct: 424 MRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGR 483
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
DA M A G +P+ Y ++D+ R+ + ++ L+++M PD Y
Sbjct: 484 RADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQV 543
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
++ A A+E D C + E + ++ R GI+ + K + + KLL+ +G
Sbjct: 544 LLVAL--AKE-DKCEEI-EEVIQDMELLCRMNLGIISTMLIKARCVSQGAKLLKKACLQG 599
Query: 570 TKLDERLYHSAMNA 583
K D + S MNA
Sbjct: 600 YKPDIKSLRSIMNA 613
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 161/392 (41%), Gaps = 11/392 (2%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N+ + Y + +Y V++ M G + +M A G +++ + E +
Sbjct: 783 WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQ 842
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
S +L D+ K+G FE +K + MK G L + +Y S+I
Sbjct: 843 DMNFK---ISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHN 899
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS-DCIS 367
+ E + E E G D + L+ MY G ++T V S+ A L+ D +
Sbjct: 900 RFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYN 959
Query: 368 CAIV---NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
IV F G+ + ++ +G P +Y S++ A + L +A+++F E
Sbjct: 960 TLIVMYCRSFRPEEGF----TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEE 1015
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M+ K + Y M+ +Y G A L+A MK G EP + + LM +G A
Sbjct: 1016 MRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQ 1075
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
R+ E + ++ + + Y+TV AY + +++ E + +G D +
Sbjct: 1076 PREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTC 1135
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ S Q + + LL+ ++ G L RL
Sbjct: 1136 FIRAASLCEQTADAILLLKSLQDCGFDLPIRL 1167
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 173/397 (43%), Gaps = 5/397 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ M+ GI Y I+ Y K+G E L + + S + I+ +
Sbjct: 697 VFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRV--IIIE 754
Query: 268 SLGKSGRAFEALKFFRDMKE-KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ GK +A + +++ GI D I+ +LI ++A + A +F + G L
Sbjct: 755 AYGKIKLWQQAEILVKGLRQASGI--DRRIWNALIHAYAESGLYEKARAVFDNMIKTGPL 812
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+ ++ I +G +++ VVE +++ KIS +++ F+K + +K+
Sbjct: 813 PTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKI 872
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
Y + + G +P Y S+I+ C + E + EM+ GF + ++++ MY
Sbjct: 873 YNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTA 932
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G + + G EP+ YN+L+ M+ R+ + L EM +R +TP S
Sbjct: 933 AGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQS 992
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y ++++A +A + + + E R ++R+I +M+ ++ + LL MK
Sbjct: 993 YKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMK 1052
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
+G + H M + AG +A+ + N + +
Sbjct: 1053 EDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSS 1089
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 123/298 (41%), Gaps = 7/298 (2%)
Query: 70 DSHHQTAV-PDAKKFDSFLHGMLKDP-QTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYL 127
D+ H + PD F++ ++ K +A D E ++ RP+ T LI
Sbjct: 245 DTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQ-SGLRPDVITYNTLISAC 303
Query: 128 VQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-L 186
QS + V++ ED PD T + +V+ R K + A L + + G +
Sbjct: 304 SQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDA 363
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ +NS + + K E++ AG + Y ++ Y K+G + L+ E
Sbjct: 364 ITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDE 423
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
R + TP + Y ++ DSLGK R EA K DM + G+ +++LIC++A
Sbjct: 424 M--RAMGCTPDAV-TYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAK 480
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
AE F G+ D L ++ ++ G EK L + M N + D
Sbjct: 481 GGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDD 538
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 71/179 (39%), Gaps = 4/179 (2%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F+P+ + L L+ + +D + + PD T + L+ R+ + +
Sbjct: 916 FKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGF 975
Query: 173 TLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
TLL G L ++ S + K + ++E+M+S L+ Y +M+ Y
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIY 1035
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
G+ K L K ++ T + H IL S G +G+ EA ++K +
Sbjct: 1036 RNAGNHSKAENLLAVMKEDGIEPTIATMH---ILMTSYGTAGQPREAENVLNNLKSSSL 1091
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 104/521 (19%), Positives = 230/521 (44%), Gaps = 50/521 (9%)
Query: 109 KLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS--CVR 164
++ +P S + L + ++ K + ++VSL + +I + P + + +V + C+R
Sbjct: 52 RMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGI-PISDSILNIVTNSYCLR 110
Query: 165 ARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV-LDSG 222
R A ++L +++ G ++ FN+ +GG + +++++K+ I +
Sbjct: 111 HR-IDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEV 169
Query: 223 CYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFF 282
Y +M K G +EK +L + + +T Y I+ D+L K A+
Sbjct: 170 MYGTVMNGLSKRGHTEKTLSLL---RIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLL 226
Query: 283 RDMKEKGILEDPSIYASLI---CSFASITEVKL--------------------------- 312
+MK+K I + Y SLI C +VK
Sbjct: 227 NEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKE 286
Query: 313 -----AEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDC 365
A+E+ + EKG+ +P++ +M Y G V++ V +++ +K +
Sbjct: 287 GKVEDADEVMRHMIEKGV--EPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIF 344
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++NG+ K++ A++++ ++ +G P VTY++I++ + A+K+F EM
Sbjct: 345 SYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEM 404
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+ G + +S+++ Y K G + +AM L +K++ + N+ Y +++ + +
Sbjct: 405 LRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRV 464
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
R+ +++++ + PD +Y +I+ + R FD + NG + ++
Sbjct: 465 REAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVI 524
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ F + ++I E+V +++M G D +N L++
Sbjct: 525 MQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKE 565
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 168/403 (41%), Gaps = 43/403 (10%)
Query: 64 TIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLL 123
T+ L R PD + + + + KD + A + NE K+ P T L
Sbjct: 187 TLSLLRIMEQGNTKPDVRTYSIVIDALCKDINL-DAAINLLNEMKQ-KNIPPNIFTYNSL 244
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE 183
I L + +W+ + +L + N+ P+ HT S L+ + K + A+ +++
Sbjct: 245 IDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMR------- 297
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
HM G+ D Y IM+ Y G ++ +
Sbjct: 298 ----------------HMI-----------EKGVEPDIITYSAIMDGYCLRGQVDRARRV 330
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
F + + + FS Y IL + K +A++ F ++ +KG+ D Y++++
Sbjct: 331 FNVLRDKGIKPNIFS---YSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHG 387
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLK 361
+ + A+++F E G P++CL L+ Y + GLVE+ + + ++ +
Sbjct: 388 LIEVGRIGDAKKIFDEMLRVG--PTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNRED 445
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++NG K A ++E+L S G IP TY +I +CR L+ + + +
Sbjct: 446 TNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGI 505
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+M+ G + Y+ ++ + ++ +I + + + +M +G
Sbjct: 506 LRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRG 548
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/395 (20%), Positives = 167/395 (42%), Gaps = 13/395 (3%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
+MK V+D + ++ + + V +LF E + + P S + I+ +S
Sbjct: 55 RMKPLPSVID---FSKLFKTMINMKHYSAVVSLFREMR---ILGIPISDSILNIVTNSYC 108
Query: 271 KSGR---AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
R AF L + + GI + + +L+ + +V A LFK+ + +
Sbjct: 109 LRHRIDCAFSVLPIYL---KTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICE 165
Query: 328 DPEVCLKLVLMYI-EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
EV V+ + + G EKTL ++ M+ K +++ K AA+ +
Sbjct: 166 PNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINL 225
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
++ + P TY S+I+ C++ + K + + EM + V +S ++ K
Sbjct: 226 LNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCK 285
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G++ DA ++ M KG EP++ Y+++MD + + + +++ + + + P+ S
Sbjct: 286 EGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFS 345
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y+ +I+ Y + + ++ + E G D ++ ++ +I + K+ +M
Sbjct: 346 YSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEML 405
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
G D L+ + + GL +A L E
Sbjct: 406 RVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLE 440
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 178/384 (46%), Gaps = 6/384 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++E M + + + ++ AY + G E A+L L + ++ TP + Y + +
Sbjct: 96 LFEDMPLNDVEWNVYSFTALINAYGRNGQHE--ASLHLLARMKREKVTP-NLITYNTVIN 152
Query: 268 SLGKSGRAFEAL-KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ K G +E L F M+ +GI D Y +L+ + +S V+ A +F+ E G++
Sbjct: 153 ACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVV 212
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVK 385
D LV +Y + E +++ M+ A D ++ I + + + Y AA K
Sbjct: 213 PDSITYNALVDIYGQADRHEGVGELLREMEQAG-NAPDVVAYNILIEAYGRAGKYRAAAK 271
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+++Q+ GC P VT+++++ AY + Y + +F +M+++G + V Y++++ ++G
Sbjct: 272 MFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFG 331
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+ G ++++ L + G EP++ Y L+ G+ + +K+ + M + VTP
Sbjct: 332 QGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTD 391
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+T +I+AY A + +N + +G D ++G + E M
Sbjct: 392 GFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTM 451
Query: 566 KSEGTKLDERLYHSAMNALRDAGL 589
EG D Y+S + A GL
Sbjct: 452 IDEGISADVSTYNSLIEAFGRGGL 475
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 186/457 (40%), Gaps = 9/457 (1%)
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFN 190
+W+ ++ L + + PD T + L+++C + A + + G + + +N
Sbjct: 160 EWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYN 219
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ + Y + + + +M+ AG D Y ++EAY + G A +F + +
Sbjct: 220 ALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEA 279
Query: 251 KL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
D FST L ++ GK G E F DMKE+G D + Y +LI F
Sbjct: 280 GCTPDVVTFST-----LLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGG 334
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ + LF + + G+ D L+ + GL + + M + + +
Sbjct: 335 FFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFT 394
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++ + Y A + + GC P TY ++I A+ LY +A ++ M +
Sbjct: 395 GLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDE 454
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G V Y+S++ +G+ G DA+ M+ C PN Y +LM ++ A +
Sbjct: 455 GISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEA 514
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE-FRMNGGVIDRAIAGIMVG 547
+ + +++ P SY ++S R +D K E N I + GI+ G
Sbjct: 515 KAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEMLEPNMPSIYGVVGGILKG 574
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + + +K +G + R Y++ + AL
Sbjct: 575 EMDDGTNWQRVEYAFDGLKVDGVGSNLRFYNALLEAL 611
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 145/320 (45%), Gaps = 2/320 (0%)
Query: 277 EALKFFRDM-KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
+AL+ F+ M + + + +Y +I + A ELF++ + + L
Sbjct: 56 KALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTAL 115
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV-KVYEQLISQG 394
+ Y G E +L ++ MK K+ + ++N +K W + ++ Q+ +G
Sbjct: 116 INAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEG 175
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
P +TY ++++A L +A VF M + G + Y+++V +YG+ R
Sbjct: 176 IQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVG 235
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L+ +M+ G P+V YN L++ +GRA R K++K+M+ TPD V+++T++ AY
Sbjct: 236 ELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAY 295
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ +D + + + G D ++ VF + +E + L D+ G + D
Sbjct: 296 GKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDM 355
Query: 575 RLYHSAMNALRDAGLQMQAQ 594
Y + + GL A+
Sbjct: 356 STYAGLLYSCGKGGLHKAAK 375
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 136/365 (37%), Gaps = 27/365 (7%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
PD F + L K E+ + + ++ E P+ +T LI+ Q +
Sbjct: 282 TPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTE--PDVNTYNTLIQVFGQGGFFQES 339
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT----LLQVFI---TDGEIALLAF 189
++L D V PD T + L+ SC + K A +LQ ++ TDG F
Sbjct: 340 INLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDG------F 393
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
+ Y +Y + MK +G D +E Y + + L+ E S
Sbjct: 394 TGLITAYGNAALYSEATYAFNSMKESGCKPD-------LETYNALIGAHAGGGLYCEAGS 446
Query: 250 RKL----DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
L + Y L ++ G+ G +A++F RDM+E + Y +L+ +
Sbjct: 447 AYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYC 506
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ A+ F + + G L + L+ + + V+E M +
Sbjct: 507 TAGLFDEAKAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEMLEPNMPSIYG 566
Query: 366 ISCAIVNGFSKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+ I+ G W V+ ++ L G Y +++ A + +A +VF E
Sbjct: 567 VVGGILKGEMDDGTNWQRVEYAFDGLKVDGVGSNLRFYNALLEALWCLGQRERACRVFAE 626
Query: 425 MQQKG 429
+++G
Sbjct: 627 ARKRG 631
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 105/462 (22%), Positives = 201/462 (43%), Gaps = 12/462 (2%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P +++ L ++ + A + + E + + P T +LIR + D
Sbjct: 166 MPGVLSYNAVLDATIRSKRNISFAENVFKEMLE-SQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
++L + + LP+ T + L+ + RK LL+ G E L+++N + G
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ V +M G LD Y +++ Y K G+ + AL + + + T
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ--ALVMHAEMLRHGLT 342
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P S Y L S+ K+G A++F M+ +G+ + Y +L+ F+ + A
Sbjct: 343 P-SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 316 LFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVN 372
+ +E + G P V L+ + G +E + V+E MK L D +S +++
Sbjct: 402 VLREMNDNGF--SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS-PDVVSYSTVLS 458
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
GF + A++V +++ +G P +TY+S+I +C +A ++ EM + G
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
Y++++ Y G + A+ L +M KG P+V Y+ L++ + R+ ++L
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
++ + P V+Y T+I + EF V F M G
Sbjct: 579 LKLFYEESVPSDVTYHTLIENCSNI-EFKSVVSLIKGFCMKG 619
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 180/379 (47%), Gaps = 13/379 (3%)
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ +++KM++ G + + Y +++ Y K+ K+ F +S L + Y ++
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKL---RKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ L + GR E +M +G D Y +LI + E + L AE M
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK--EGNFHQALVMHAE---M 336
Query: 326 LRD---PEVCLKLVLMY--IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
LR P V L++ + G + + ++ ++ M+ L ++ +V+GFS++
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A +V ++ G P VTY ++IN +C A V +M++KG VV+YS++
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
++ + ++ + +A+ + +M KG +P+ Y+SL+ + ++ L++EM R +
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
PD+ +YT +I+AY + + ++ +NE G + D +++ +K S+ E +
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 561 LLQDMKSEGTKLDERLYHS 579
LL + E + + YH+
Sbjct: 577 LLLKLFYEESVPSDVTYHT 595
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 145/335 (43%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L D K + + K R M KG+ + Y +I +K + E
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+G D L+ Y +EG + L + M L S ++++ K
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A++ +Q+ +G P + TY ++++ + + ++A +V EM GF VV Y++++
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ TG++ DA+ ++ MK KG P+V Y++++ R+ ++ + ++ +EM + +
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD ++Y+++I + R Y E G D ++ + +E+ ++L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+M +G D Y +N L +A+ L
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 110/214 (51%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++ GF A+ +++++ ++GC+P VTY ++I+ YC++ K+ M KG
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ +++Y+ ++ + GR+++ +++ +M +G + YN+L+ + + N Q
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+ EM R +TP ++YT++I + +A + ++F ++ R+ G + +V F
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
S+ + E ++L++M G Y++ +N
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 2/231 (0%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL-YSKAEKVFIEMQQK 428
+V +S+ A+ + + G +PG ++Y ++++A R S AE VF EM +
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
V Y+ ++ + G I A+ L KM+ KGC PNV YN+L+D + + + +
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
KL + M + + P+ +SY VI+ R E G +D ++
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA-QWLQQ 598
+ K + + + +M G Y S ++++ AG +A ++L Q
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 170/416 (40%), Gaps = 35/416 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T LI + ++ + + + ++ + P+ T + LV + A +
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY-- 231
L+ +G +++ +N+ + G+ I V E MK G+ D Y ++ +
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 232 -YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y + ++ +V +E K K D+ +S+ L + R EA + +M G+
Sbjct: 463 SYDVDEALRVKREMVE-KGIKPDTITYSS-----LIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGML-----------------RDPEVCL 333
D Y +LI ++ +++ A +L E EKG+L R E
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 334 KLVLMYIEEGLVEKTL--DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L+ ++ EE + ++E+ N + K +++ GF + A +V+E ++
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSV----VSLIKGFCMKGMMTEADQVFESML 632
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+ P Y +I+ +CR KA ++ EM + GF V ++V K G++
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692
Query: 452 DAMWLVAKMKAKGCE-PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
+ ++ + + CE L++++ R N+ V + EM + P+ +S
Sbjct: 693 ELNSVIVHV-LRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 6/212 (2%)
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR-IRDA 453
C + ++ +Y R++L KA + Q GF V++Y++++ ++ R I A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ +M PNV+ YN L+ A N+ L+ +ME + P+ V+Y T+I
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
Y + R+ D K + G + +++ + +++E+ +L +M G LD
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 574 ERLYHSAMNALRDAG-----LQMQAQWLQQNF 600
E Y++ + G L M A+ L+
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 418 AEKVFIEMQQKGFDKCVVA---YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
A VF +Q+ +D C + +V Y + I A+ +V +A G P V YN+
Sbjct: 116 ASLVFKSLQET-YDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNA 174
Query: 475 LMDMHGRAK-NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
++D R+K N+ E ++KEM +V+P+ +Y +I + A D+ + +++
Sbjct: 175 VLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETK 234
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G + + ++ + KL +I++ KLL+ M +G + + Y+ +N L
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGL 285
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 106/499 (21%), Positives = 204/499 (40%), Gaps = 18/499 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNE--AKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
PD +++ + G K+ + A D + E + +P P+ T ++ L +++ D
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNK-ACDLFKEMVQRGIP---PDLVTYSSVVHALCKARAMDK 274
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-----QVFITDGEIALLAFN 190
+ VLPD T + L+ ++K A + Q + D ++A N
Sbjct: 275 AEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD----VVALN 330
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ MG K V++ M G D Y ++ Y G + LF
Sbjct: 331 TLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLF---DLM 387
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
D + + +L + G +A+ F +M++ G+ Y ++I + I ++
Sbjct: 388 LGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKM 447
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A E F + ++G++ D L+ + G + K +++ + N +++ +I
Sbjct: 448 DDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSI 507
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+N K A +++ ++ G P V Y +++ YC + KA +VF M G
Sbjct: 508 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+ VV Y ++V Y K GRI + + L +M KG +P+ +YN ++D A +
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
+ EM + +K +Y+ V+ + R FD + + E R ID M+
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 687
Query: 551 KLSQIEELVKLLQDMKSEG 569
+ ++EE L + G
Sbjct: 688 QTRRVEEAKDLFASISRSG 706
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 149/361 (41%), Gaps = 42/361 (11%)
Query: 242 ALFLECKSRKLDSTPFS--THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
ALF SR S ++ Y IL D ++ R AL FF + G+ D I +
Sbjct: 94 ALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASH 153
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEV-CLKLVLMYIEEGLVEKTLDVVESMKNA 358
L+ F E K +E A + + R PE+ C+ V Y N
Sbjct: 154 LLKGFC---EAKRTDE----ALDILLHRTPELGCVPDVFSY-----------------NI 189
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG---CIPGQVTYASIINAYCRIALY 415
LK S C +G +++++G C P V Y ++I+ + +
Sbjct: 190 LLK-SLC-----------NQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDV 237
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+KA +F EM Q+G +V YSS+V K + A + +M KG P+ W YN+L
Sbjct: 238 NKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNL 297
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ + ++ +++KEM R+ + PD V+ T++ + + + ++ M G
Sbjct: 298 IYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQ 357
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
D IM+ ++ + ++ L M +G D ++ + A + G+ +A
Sbjct: 358 NPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMI 417
Query: 596 L 596
+
Sbjct: 418 I 418
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 152/369 (41%), Gaps = 16/369 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T +LI+ D + + + + + V P T ++A+ R K A
Sbjct: 394 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453
Query: 175 LQVFITDGEIA-LLAFNSAMGGY-NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
I G + A++ + G+ + + L+ E M + G+ LD + I+
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN-GMRLDIVFFGSIINNLC 512
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K+G +F + L +Y +L D G+ +AL+ F M GI
Sbjct: 513 KLGRVMDAQNIFDLTVNVGLHPDAV---VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 569
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV- 351
+ Y +L+ + I + LF+E +KG+ P L +++ +GL E V
Sbjct: 570 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGI--KPSTILYNIII---DGLFEAGRTVP 624
Query: 352 ----VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
M + + ++ C ++ G K R + A+ ++++L + +T ++I
Sbjct: 625 AKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIA 684
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+ +A+ +F + + G C V YS M+ K G + +A + + M+ GCEP
Sbjct: 685 GMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEP 744
Query: 468 NVWIYNSLM 476
+ + N ++
Sbjct: 745 DSRLLNHVV 753
>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
Length = 500
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 168/344 (48%), Gaps = 6/344 (1%)
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+ P + H + L D+L KS R +A + M + GI D + +LI F V+ A
Sbjct: 6 TPPPNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERA 65
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMK-NAKLKISDCISCAI 370
E+F+E + + P+ L VL+ Y +E +++ L+++ M+ +++ I +I
Sbjct: 66 WEIFQEMIKSNRCQ-PDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSI 124
Query: 371 VNGFSKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
V+G + + A K + E ++ QGC P VTY S+I C+ A ++ M ++
Sbjct: 125 VDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERK 184
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+V+YS ++ K GR+ DA +V +M+ GCE NV IY +L+D ++ L
Sbjct: 185 IQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAY 244
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
L++ M+R P++ +Y T+I + R + + ++ R + +D A+ +V
Sbjct: 245 ALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIR-DYCPLDVAMYTAVVSGL 303
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ ++++ L ++M+ G D Y+ ++ +G +A
Sbjct: 304 CRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEA 347
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 160/401 (39%), Gaps = 27/401 (6%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F + + G K+ + E A++ + E K +P+ +LI + + D +
Sbjct: 44 PDVVTFTALIRGFCKN-RMVERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRAL 102
Query: 138 SLSEDFKI-YNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDG-EIALLAFNSAMG 194
L + ++ + PD + +V R+ +F A L + + G ++ + S +
Sbjct: 103 ELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIR 162
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
G K + ++ M I Y I++ K G +V + + +
Sbjct: 163 GACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAG---RVYDAYRVVREMETLG 219
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+ +Y L D L KSG +A +R MK G + YA+LI +F + A
Sbjct: 220 CELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETAL 279
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLV-EKTLD----VVESMKNAKLKISDCIS 367
LF +RD C V MY + GL E+ LD + M+ A +
Sbjct: 280 GLFDH------IRD--YCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAY 331
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQ-GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
+++G + A ++ E+L GC+ +TY ++I C +F EM+
Sbjct: 332 NVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEMR 387
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
Q+G YS+++ +G IR A L +M A G P
Sbjct: 388 QRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASGLSP 428
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 89/449 (19%), Positives = 171/449 (38%), Gaps = 77/449 (17%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
P+ H + L+ + ++ + A L++ G ++ F + + G+ K M +
Sbjct: 9 PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68
Query: 209 YEKM-KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK-SRKLDSTPFSTHMYKILC 266
+++M KS D Y +++ Y K ++ L E + R++ +Y +
Sbjct: 69 FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQP---DVVIYNSIV 125
Query: 267 DSLGKSGRAFEALKFFRD-MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
D L +S R EA KF + M +G Y SLI ++KLA ++ E+ +
Sbjct: 126 DGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKI 185
Query: 326 LRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
P + V++ + G V VV M+ +++ I +++G K A
Sbjct: 186 --QPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDA 243
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCR---------------------IALYS------ 416
+Y + G P Q TYA++I+ +CR +A+Y+
Sbjct: 244 YALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYCPLDVAMYTAVVSGL 303
Query: 417 -------KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA---------------- 453
A +F EM+ G AY+ ++ ++GR +A
Sbjct: 304 CRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVAN 363
Query: 454 ----------------MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
M L +M+ +G P+ Y++L+D + +R+ L +EM
Sbjct: 364 LLTYNTVIAGCCLESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLA 423
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKF 526
++P V++ +R D+ K
Sbjct: 424 SGLSPPSGVLGRVVARLCWSRRGDLAAKL 452
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 114/555 (20%), Positives = 237/555 (42%), Gaps = 21/555 (3%)
Query: 44 NPSSIINHRFFQVNASTNFPTIELNRDSHHQTAVPDA---KKFDSFLHGM---LKDPQTQ 97
+PS N ++ST +I +HH + A ++ SF H + L++ +T
Sbjct: 9 SPSFKPNLSPLSTHSSTIPSSIPQTSSTHHPNPILPAAFNREEISFHHPLSLFLRNCKTG 68
Query: 98 EL----AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAH 153
+ A+ +++ + P S+ L+ L + + + SL + ++ + PD
Sbjct: 69 NITAIQAFHFFDLMMRSHPI-PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLF 127
Query: 154 TCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKM 212
T S L + A + + G I ++ + + + G H ++ +M
Sbjct: 128 TLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRM 187
Query: 213 KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH------MYKILC 266
+ G ++ Y +++ + G+ L E + D++ + + Y I+
Sbjct: 188 QKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLN---DASQYGVNCKPGVITYSIII 244
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
D L K GR EA + F +MK +G++ D Y++LI F + ++ LF E ++G+
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D L+ +EG V + ++E M + + ++++GF +A ++
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREL 364
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ + S+G P +++Y ++IN YC+ +A ++ EM Q G V Y +++ +
Sbjct: 365 FLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQ 424
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G++ DA L MK G N IY +D + L + +L+ E++ + +
Sbjct: 425 KGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIEN 484
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y+ +I +A + + + + + G D IM+ F K+ Q++ L + M+
Sbjct: 485 YSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKME 544
Query: 567 SEGTKLDERLYHSAM 581
G D Y++ +
Sbjct: 545 ENGCTPDIIAYNTLL 559
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 197/423 (46%), Gaps = 28/423 (6%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD-------SGCYCQIMEAYYKIGDSEKV 240
+FN +GG K++ Y +Y +M+ AG+ D + C C + SE +
Sbjct: 93 SFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRV------SEAL 146
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
AA+ + + + T + K LC R EA + F M++ G + Y +L
Sbjct: 147 AAMAGILRRGYIPNVVTYTTLIKGLC----MEHRISEATRLFLRMQKLGCTPNAVTYGTL 202
Query: 301 I---CSFASIT-EVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVES 354
I C ++ +KL +E+ +A + G+ P V +++ + G ++ ++ E
Sbjct: 203 IKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEE 262
Query: 355 MKNAKLKISDCIS-CAIVNGFSKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRI 412
MK A+ I D IS +++GF G W K ++++++ QG P VT++ +I+ C+
Sbjct: 263 MK-AQGMIPDVISYSTLIHGFC-CAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKE 320
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
++A+K+ M Q+G ++ Y+S++ + G + A L M +KG EP+ Y
Sbjct: 321 GKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISY 380
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+L++ + + +++ L+ EM + +P+ +Y T++ + + K + +
Sbjct: 381 TTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKT 440
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
G + I GI + K + E ++L ++KS KL+ Y ++ L AG +++
Sbjct: 441 YGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAG-KLE 499
Query: 593 AQW 595
W
Sbjct: 500 TAW 502
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/460 (21%), Positives = 186/460 (40%), Gaps = 45/460 (9%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
+ P T LI+ L + L + P+A T L+ + IA
Sbjct: 157 YIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIAL 216
Query: 173 TLLQVFITDG-------EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
L + + D + ++ ++ + G K+ ++E+MK+ G++ D Y
Sbjct: 217 KLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYS 276
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
++ + G ++ LF E + + + + +L D+L K G+ EA K M
Sbjct: 277 TLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVT---FSVLIDTLCKEGKVTEAKKLLEVM 333
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
++GI+ + Y SLI F + ++ A ELF KG+ D L+ Y + V
Sbjct: 334 IQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKV 393
Query: 346 EKTLDVVESMKNA------------------KLKISDC-----------------ISCAI 370
++ +++ M K K+ D I
Sbjct: 394 KEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIF 453
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++G K + A++++ +L S Y+ +I+ C+ A ++F ++ Q+G
Sbjct: 454 LDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGL 513
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
VV Y+ M+ + K G++ +A L KM+ GC P++ YN+L+ L +V K
Sbjct: 514 QPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIK 573
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
L +M ++ V+P+ S T V+ + ++ V +F
Sbjct: 574 LLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKF 613
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 99/223 (44%), Gaps = 12/223 (5%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A ++ ++ IP ++ ++ +I YS+ ++ EM+ G + S +
Sbjct: 75 AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
R+ +A+ +A + +G PNV Y +L+ + + +L+ M++ TP
Sbjct: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNG---------GVIDRAIAGIMVGVFSKLS 553
+ V+Y T+I + ++ +K + E + GVI + I++ K+
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYS---IIIDGLCKVG 251
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ +E +L ++MK++G D Y + ++ AG Q++ L
Sbjct: 252 REDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHL 294
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 121/546 (22%), Positives = 228/546 (41%), Gaps = 52/546 (9%)
Query: 48 IINHRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEA 107
++ F N S+ P + L+ +H P + H +L+ + ++E
Sbjct: 36 LLQDLFLNQNHSST-PHLHLSPSTHRTPRSP--HRLSPQAHRILQTLIHPSFDSNRFHEI 92
Query: 108 KKLPEFRPEKSTLKL----LIRYLVQSKKWDSIVSLSEDFKIYN---VLPDAHTCSRLVA 160
L +P S+L +I+ L + K+D +SL + + N L + + +V+
Sbjct: 93 LPLLFDQPSSSSLSWDILGIIKGLGFNNKFDLALSLFDFIRTRNDRVSLLNGSVIAVIVS 152
Query: 161 SCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVL 219
+ + A +LL DG E+ + + S + Y Y + V+ KMK G
Sbjct: 153 ILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEP 212
Query: 220 DSGCYCQIMEAYYKIGDS-EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFE- 277
Y I+ Y K+G K+ AL + K L + T+ I C ++G +E
Sbjct: 213 TLITYNAILNVYGKMGMPWAKIIALVQDMKCHGL-APDLCTYNTLISC---CRAGSLYEE 268
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
AL F ++K G D Y +L+ + K A E+ K+ E LV
Sbjct: 269 ALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVS 328
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
Y+ GL+E L + KR+ ++ +G P
Sbjct: 329 AYVRGGLLEDALVL------------------------KRK-----------MVDKGIKP 353
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
TY ++++ + A +VF EM++ G + +++++ MYG G+ + + +
Sbjct: 354 DVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVF 413
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
++K C P++ +N+L+ + G+ +V +++EM+R + P++ ++ T+ISAY R
Sbjct: 414 KEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRC 473
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
FD + Y G D + ++ ++ E+ K+L +MK G K +E Y
Sbjct: 474 GSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTY 533
Query: 578 HSAMNA 583
S ++A
Sbjct: 534 SSLLHA 539
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/505 (20%), Positives = 213/505 (42%), Gaps = 41/505 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T LI ++ + L E+ K+ PDA T + L+ ++R+ K A +
Sbjct: 248 PDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEV 307
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ ++ +++ +NS + Y + + +++ KM GI D Y ++ +
Sbjct: 308 LKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVN 367
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G E +F E RK+ P + + L G G+ E +K F+++K D
Sbjct: 368 AGKEELAMEVFEEM--RKVGCKP-NICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPD 424
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ +L+ F +F+E + + + L+ Y G ++ + +
Sbjct: 425 IVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYK 484
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYC-- 410
M A + A++ + R G W + KV ++ GC P +VTY+S+++AY
Sbjct: 485 RMLEAGVSPDLSTYNAVLATLA-RGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANG 543
Query: 411 ---------------------------------RIALYSKAEKVFIEMQQKGFDKCVVAY 437
++ L + E+ F+E +++G V
Sbjct: 544 REVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTS 603
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++M+++YG+ + A ++ M G ++ YNSLM M+ R +N + E++++E+
Sbjct: 604 NAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILD 663
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ + PD +SY VI AY R D + E ++ V D + ++ S E
Sbjct: 664 KGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVE 723
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMN 582
+ +++ M +G K + Y+S ++
Sbjct: 724 AIDVIRYMIKQGCKPNHNTYNSIVD 748
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 207/469 (44%), Gaps = 32/469 (6%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDY------------YNEAKKLPEF---RPEK------ 117
D+ +F L + P + L++D ++ A L +F R ++
Sbjct: 85 DSNRFHEILPLLFDQPSSSSLSWDILGIIKGLGFNNKFDLALSLFDFIRTRNDRVSLLNG 144
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
S + +++ L ++ + SL + + D + + L+ + +K++ A L+V
Sbjct: 145 SVIAVIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDA---LKV 201
Query: 178 FITDGEIA----LLAFNSAMGGYNKLHMYYSTIL-VYEKMKSAGIVLDSGCYCQIMEAYY 232
F E+ L+ +N+ + Y K+ M ++ I+ + + MK G+ D Y ++
Sbjct: 202 FGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCR 261
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
E+ LF E K + Y L D GKS R EA++ + M+
Sbjct: 262 AGSLYEEALDLFEEIKVAGFRPDAVT---YNALLDVYGKSRRPKEAMEVLKQMESNSFRP 318
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
Y SL+ ++ ++ A L ++ +KG+ D L+ ++ G E ++V
Sbjct: 319 SVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVF 378
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
E M+ K + C A++ + R + VKV++++ C P VT+ +++ + +
Sbjct: 379 EEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQN 438
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+ S+ VF EM++ F ++++++ YG+ G AM +M G P++ Y
Sbjct: 439 GMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTY 498
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
N+++ R Q EK+ EM+ P++V+Y++++ AY RE +
Sbjct: 499 NAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVE 547
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 193/444 (43%), Gaps = 80/444 (18%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + L G + + +ELA + + E +K+ +P T LI+ K++ +V
Sbjct: 353 PDVYTYTTLLSGFV-NAGKEELAMEVFEEMRKV-GCKPNICTFNALIKMYGDRGKFEEMV 410
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
+ ++ K+ PD T NTLL VF +G +S + G
Sbjct: 411 KVFKEIKVCKCSPDIVTW----------------NTLLAVFGQNG------MDSEVSG-- 446
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD---S 254
V+E+MK + + + ++ AY + G ++ A + R L+ S
Sbjct: 447 ----------VFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAY----KRMLEAGVS 492
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK--- 311
ST Y + +L + G ++ K +MK+ G + Y+SL+ ++A+ EV+
Sbjct: 493 PDLST--YNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMN 550
Query: 312 -LAEEL-------------------------------FKEAEEKGMLRDPEVCLKLVLMY 339
LAEE+ F E ++G+ D ++ +Y
Sbjct: 551 ALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIY 610
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ +V K +++ M + L +S +++ +S+ + + +++ +++ +G P
Sbjct: 611 GRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDV 670
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
++Y +I AYCR + +A+++ EM+ VV Y++ +A Y +A+ ++
Sbjct: 671 ISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRY 730
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAK 483
M +GC+PN YNS++D + + K
Sbjct: 731 MIKQGCKPNHNTYNSIVDWYCKLK 754
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 99/197 (50%), Gaps = 1/197 (0%)
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
A I++ + S+A + ++ GF+ V Y+S++ Y + RDA+ + KMK
Sbjct: 148 AVIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKE 207
Query: 463 KGCEPNVWIYNSLMDMHGR-AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
GCEP + YN++++++G+ ++ L ++M+ + PD +Y T+IS ++
Sbjct: 208 VGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYE 267
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ + E ++ G D ++ V+ K + +E +++L+ M+S + Y+S +
Sbjct: 268 EALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLV 327
Query: 582 NALRDAGLQMQAQWLQQ 598
+A GL A L++
Sbjct: 328 SAYVRGGLLEDALVLKR 344
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 1/188 (0%)
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI-RDAMWLVAKM 460
Y S+I AY Y A KVF +M++ G + ++ Y++++ +YGK G + LV M
Sbjct: 182 YTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDM 241
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
K G P++ YN+L+ + L++E++ PD V+Y ++ Y ++R
Sbjct: 242 KCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRP 301
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
++ + N +V + + +E+ + L + M +G K D Y +
Sbjct: 302 KEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTL 361
Query: 581 MNALRDAG 588
++ +AG
Sbjct: 362 LSGFVNAG 369
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 162/336 (48%), Gaps = 3/336 (0%)
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDSTPF-STHMYKILCDSLGKSGRA 275
DSG +++ K G + LF L D P +T Y + G +
Sbjct: 152 FDSGALAALLKELNKSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQL 211
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
AL+ +M+ +GI + Y++L+ E+ LA +++++ +G + L
Sbjct: 212 RRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTL 271
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ +Y + G E+ + V+++++ + ++ + A+++YE++++ G
Sbjct: 272 IDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGA 331
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P TY ++I+AY + +A ++F +M ++G ++ V+ YSS+++ K GR A+
Sbjct: 332 QPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALE 391
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L +M +GC PNV YNSL+ + + ++++++M+ R PD V++ +I+AY+
Sbjct: 392 LFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYD 451
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
RA + + + + + + D + +VG K
Sbjct: 452 RAGHWRRALTAFEQMKAHNCRPDSVVYNTIVGALWK 487
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 148/339 (43%), Gaps = 6/339 (1%)
Query: 257 FSTHMYKILCDSLGKSG---RAFEALKFFRDMKEKG---ILEDPSIYASLICSFASITEV 310
F + L L KSG RA E + R + + L + Y ++I + ++
Sbjct: 152 FDSGALAALLKELNKSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQL 211
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
+ A EL E +G+ + L+ + I+ ++ LDV M + +
Sbjct: 212 RRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTL 271
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++ + K + A++V + L QG P TY ++I A +A +++ M G
Sbjct: 272 IDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGA 331
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
Y+++++ YGK G++ A+ + M +GCE NV Y+SL+ +A +
Sbjct: 332 QPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALE 391
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L++EM P+ V+Y ++I+A + +++ + + + + G D G ++ +
Sbjct: 392 LFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYD 451
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ + + MK+ + D +Y++ + AL GL
Sbjct: 452 RAGHWRRALTAFEQMKAHNCRPDSVVYNTIVGALWKTGL 490
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 122/266 (45%), Gaps = 6/266 (2%)
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVY 209
+ HT S L+ C++ + +A + + + +G L+ +N+ + Y K + I V
Sbjct: 229 NVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVL 288
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+ ++ GI + Y ++ A G +++ AL + + + P +T Y L +
Sbjct: 289 DALERQGIDPEIRTYNTVIIACNMSGQAQE--ALRIYERMLAAGAQPTAT-TYTALISAY 345
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
GK+G+ AL+ F+DM +G + Y+SLI + +LA ELF+E +G +
Sbjct: 346 GKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREMHTEGCRPNV 405
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYE 388
L+ + EK ++ E M++ K D ++ + R G+W A+ +E
Sbjct: 406 VTYNSLIAACAQGAQWEKAQEMFEQMQHRGCK-PDAVTFGGLIAAYDRAGHWRRALTAFE 464
Query: 389 QLISQGCIPGQVTYASIINAYCRIAL 414
Q+ + C P V Y +I+ A + L
Sbjct: 465 QMKAHNCRPDSVVYNTIVGALWKTGL 490
>gi|297725689|ref|NP_001175208.1| Os07g0491500 [Oryza sativa Japonica Group]
gi|255677777|dbj|BAH93936.1| Os07g0491500, partial [Oryza sativa Japonica Group]
Length = 654
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 181/441 (41%), Gaps = 45/441 (10%)
Query: 156 SRLVASC-----VRARKFKIANTLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILV 208
SRL+ +C V A A + T+ ++ ++++N + GY + + +
Sbjct: 217 SRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMAR 276
Query: 209 YEKMK-SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+M+ A + D Y +M+ +Y G LF E + R + + H Y ++
Sbjct: 277 LSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGND-IPQHAYVLVIG 335
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+L K G+ FE + F M ++G + +IY +LI S K A LF
Sbjct: 336 ALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMALF---------- 385
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
E MK++ LK+ IVN + AV +
Sbjct: 386 -------------------------ERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACF 420
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+G + Y S+I+ + + + +++++F EM KGF Y+ ++ K+
Sbjct: 421 RSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKS 480
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR+ DA L +M+ GC+ V+ Y L+D + + K W M + +TP ++
Sbjct: 481 GRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAF 540
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T+ S + +F + +E GVI M+ V K + ++ KL +
Sbjct: 541 RTLASGLCLSGKFSRACRILDEL-APMGVIPETAHEDMINVLCKAGRFKQACKLADGIVQ 599
Query: 568 EGTKLDERLYHSAMNALRDAG 588
+G ++ R+ +NALR AG
Sbjct: 600 KGREIPGRVRTMMINALRKAG 620
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 141/315 (44%), Gaps = 10/315 (3%)
Query: 294 PSIYASLICSFASITEVKLAEEL---FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
PS ASLI S A++ LAEEL +K G+ + L+ + GL++ ++
Sbjct: 183 PSSSASLIRSLAAL---GLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVN 239
Query: 351 VVESMKNAKLKISDCISCAI-VNGFSKR-RGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
V ++M D +S I + G+ + R + A ++ E P +VTY +++
Sbjct: 240 VFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQC 299
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVV--AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
+ + +F EM+++G + AY ++ K G+ + M + +M +GC
Sbjct: 300 HYSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCA 359
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
N IY +L+D G+ ++ L++ M+ + D V+Y +++ R + D V
Sbjct: 360 ANAAIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVAC 419
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ + G ++ ++ F K +++ +L ++M ++G D Y+ ++ L
Sbjct: 420 FRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAK 479
Query: 587 AGLQMQAQWLQQNFE 601
+G A L + E
Sbjct: 480 SGRMDDACALYKRME 494
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 203/478 (42%), Gaps = 12/478 (2%)
Query: 114 RPEKSTLKL--LIRYLVQSKK--WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFK 169
+P S ++ ++ LV+S + + +SLS + + + PD T + L+ +
Sbjct: 61 KPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMN 120
Query: 170 IANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
A +++ + G E + FN+ + G + ++ + + G LD Y ++
Sbjct: 121 FAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLI 180
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDS--TPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
KIG++ + RK+D + MY + DSL K +A + + M
Sbjct: 181 NGLCKIGETRTALQML-----RKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMI 235
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
K I D +++LI F + +++ A LF+E K + D LV +EG ++
Sbjct: 236 AKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLK 295
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+++ M + + ++++G+ A V + G P +Y ++I
Sbjct: 296 GAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMI 355
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
N +C+I + +A +F +MQ KG V Y+S++ K+GRI A LV +M G
Sbjct: 356 NGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQP 415
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
N++ YN L+D + ++ Q L K+++ + + PD ++ +I +
Sbjct: 416 ANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDV 475
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + G ++ IMV K +E LL M G D Y + + AL
Sbjct: 476 FQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQAL 533
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 150/405 (37%), Gaps = 79/405 (19%)
Query: 100 AYDYYNE--AKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
AY+ Y++ AKK+ P+ T LI + + L + + N+ PD +T +
Sbjct: 227 AYELYSQMIAKKI---SPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNI 283
Query: 158 LVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
LV + + K A +L V + +G + ++ ++S M GY ++ V + G
Sbjct: 284 LVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMG 343
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
++ YC ++ + CK + +D
Sbjct: 344 AAPNAHSYCTMINGF---------------CKIKMVD----------------------- 365
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
EAL F DM+ KGI D Y SLI + A EL E + G
Sbjct: 366 EALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNG------------ 413
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+ A + +C+ ++ K A+ + +++ QG
Sbjct: 414 -------------------QPANIFTYNCL----IDALCKNHHVDQAIALVKKIKDQGIQ 450
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P T+ +I C++ A+ VF ++ KG+ Y+ MV K G +A L
Sbjct: 451 PDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEAL 510
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
++KM G P+ Y +L+ + EKL +EM R V
Sbjct: 511 LSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 81/192 (42%), Gaps = 9/192 (4%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQ---ELAYDYYNEAKKLPEFRPEKSTLK 121
+ L D + PD ++S + G+ K + EL + ++ + F T
Sbjct: 368 LSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIF-----TYN 422
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
LI L ++ D ++L + K + PD +T + L+ + + K A + Q ++
Sbjct: 423 CLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSK 482
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G + +N + G K ++ + KM GI+ D+ Y +++A + ++EK
Sbjct: 483 GYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKA 542
Query: 241 AALFLECKSRKL 252
L E +R +
Sbjct: 543 EKLLREMIARDV 554
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 197/466 (42%), Gaps = 16/466 (3%)
Query: 67 LNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQE---LAYDYYNEAKKLPEFRPEKSTLKLL 123
L RD VP++ + + +H + ++ + E L D + L P+ T +
Sbjct: 227 LLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMF-----LMCCEPDVQTFNDV 281
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE 183
I L ++ + L + + DA T L+ R + A LL
Sbjct: 282 IHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNT 341
Query: 184 IALLAFNSAMGGYNKLHMYY-STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ +N+ + GY + + L+Y M AG D+ + +++ K G
Sbjct: 342 VL---YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALE 398
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L E +++ + + Y IL + K GR EA + M KG+ + Y LIC
Sbjct: 399 LLNEMVAKRFEPNVIT---YTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLIC 455
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ ++ A +LF E KG D L+ + +E+ L + M +
Sbjct: 456 ALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIA 515
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
+ +V+ F R A K+ ++++ +GC +TY +I A C+ K +F
Sbjct: 516 NTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLF 575
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
EM KG +++ + +++ +TG++ DA+ + M +G P++ YNSL++ +
Sbjct: 576 EEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKM 635
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF-DMCVKFY 527
++++ L+ +++ + PD ++Y T+IS + F D C+ Y
Sbjct: 636 GHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLY 681
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 203/478 (42%), Gaps = 25/478 (5%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV-ASCVRARKFKIANT 173
P T ++++ L + DS SL D + +P++ L+ A C R +
Sbjct: 203 PTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQL 262
Query: 174 LLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L +F+ E + FN + G + + + ++M G D+ Y +M +
Sbjct: 263 LEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCR 322
Query: 234 IGDSEKVAALFLECKSRKLDSTPF-STHMYKILCDSLGKSGRAFEALK--FFRDMKEKGI 290
+G ++ AL L+ P +T +Y L SGR FE K + +M G
Sbjct: 323 MGQVDEARAL--------LNKIPNPNTVLYNTLISGYVASGR-FEEAKDLLYNNMVIAGY 373
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKT 348
D + +I + A EL E K +P V +L+ + ++G +E+
Sbjct: 374 EPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRF--EPNVITYTILINGFCKQGRLEEA 431
Query: 349 LDVVESMKNAKLKIS----DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
++V SM L ++ +C+ CA+ K A++++ ++ +GC P T+ S
Sbjct: 432 AEIVNSMSAKGLSLNTVGYNCLICAL----CKDGNIEEALQLFGEMSGKGCKPDIYTFNS 487
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+IN C+ +A ++ +M +G V Y+++V + I+ A LV +M +G
Sbjct: 488 LINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRG 547
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
C + YN L+ + + + L++EM + + P +S +IS R + + +
Sbjct: 548 CPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDAL 607
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
KF + G D ++ K+ ++E L ++SEG + D Y++ ++
Sbjct: 608 KFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLIS 665
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 151/367 (41%), Gaps = 44/367 (11%)
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L ++GR EA K M +G D Y L+ + +V A L + +
Sbjct: 284 GLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNK------IP 337
Query: 328 DPEVCL--KLVLMYIEEGLVEKTLDVV-ESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+P L L+ Y+ G E+ D++ +M A + +++G K+ +A+
Sbjct: 338 NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSAL 397
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
++ +++++ P +TY +IN +C+ +A ++ M KG V Y+ ++
Sbjct: 398 ELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICAL 457
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K G I +A+ L +M KGC+P+++ +NSL++ + + + L+ +M V +
Sbjct: 458 CKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANT 517
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNG------------------GVIDRAIA---- 542
V+Y T++ A+ K +E G G +++ +
Sbjct: 518 VTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEE 577
Query: 543 -------------GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
I++ + ++ + +K LQDM G D Y+S +N L G
Sbjct: 578 MLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGH 637
Query: 590 QMQAQWL 596
+A L
Sbjct: 638 VQEASNL 644
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 193/467 (41%), Gaps = 38/467 (8%)
Query: 45 PSSIINHRFFQVNASTNFPT--IELNRDSHHQTAVPDAKKFDSFLHGM------------ 90
P+S+I N + ++L D PD + F+ +HG+
Sbjct: 238 PNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKL 297
Query: 91 -----LKDPQTQELAYDYY----------NEAKKLPEFRPEKSTL---KLLIRYLVQSKK 132
L+ T L Y Y +EA+ L P +T+ L+ Y+ +
Sbjct: 298 LDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRF 357
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNS 191
++ L + I PDA+T + ++ V+ A LL + E ++ +
Sbjct: 358 EEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTI 417
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ G+ K + M + G+ L++ Y ++ A K G+ E+ LF E +
Sbjct: 418 LINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKG 477
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
++ + L + L K+ + EAL + DM +G++ + Y +L+ +F ++
Sbjct: 478 CKPDIYT---FNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQ 534
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI- 370
A +L E +G D L+ + G VEK L + E M + ISC I
Sbjct: 535 QAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGI-FPTIISCNIL 593
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++G + A+K + +I +G P VTY S+IN C++ +A +F ++Q +G
Sbjct: 594 ISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGI 653
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
+ Y+++++ + G DA L+ K G PN ++ L++
Sbjct: 654 RPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 172/423 (40%), Gaps = 28/423 (6%)
Query: 168 FKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
FK N +L + + DG+ +A N V+ M S G+ + +
Sbjct: 170 FKSYNVVLDILV-DGDCPRVAPN-----------------VFYDMLSRGVSPTVYTFGVV 211
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
M+A + + + +L + K P S +Y+ L +L ++ R EAL+ DM
Sbjct: 212 MKALCMVSEVDSACSLLRD--MAKHGCVPNSV-IYQTLIHALCENNRVSEALQLLEDMFL 268
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE- 346
D + +I + A +L +G D L Y+ GL
Sbjct: 269 MCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTD-----ALTYGYLMHGLCRM 323
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGF-SKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+D ++ N + + +++G+ + R A +Y ++ G P T+ +
Sbjct: 324 GQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIM 383
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
I+ + A ++ EM K F+ V+ Y+ ++ + K GR+ +A +V M AKG
Sbjct: 384 IDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGL 443
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
N YN L+ + N+ + +L+ EM + PD ++ ++I+ + + + +
Sbjct: 444 SLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALS 503
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
Y++ + G + + +V F I++ KL+ +M G LD Y+ + AL
Sbjct: 504 LYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALC 563
Query: 586 DAG 588
G
Sbjct: 564 KTG 566
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 103/227 (45%), Gaps = 9/227 (3%)
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM---- 355
LI ++ + K+ E+L K+ +++G+L + + ++ Y + GL + ++ M
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVY 164
Query: 356 -KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
+ K + + +V+G R A V+ ++S+G P T+ ++ A C ++
Sbjct: 165 SCDPTFKSYNVVLDILVDGDCPR----VAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSE 220
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
A + +M + G V Y +++ + R+ +A+ L+ M CEP+V +N
Sbjct: 221 VDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFND 280
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
++ RA + + KL M R + D ++Y ++ R + D
Sbjct: 281 VIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVD 327
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 79/185 (42%), Gaps = 1/185 (0%)
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM-KAK 463
+I+ + + EK+ +M+ +G + ++ YGK G A L+ M
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVY 164
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
C+P YN ++D+ R ++ +M R V+P ++ V+ A E D
Sbjct: 165 SCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSA 224
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ +G V + I ++ + +++ E ++LL+DM + D + ++ ++
Sbjct: 225 CSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHG 284
Query: 584 LRDAG 588
L AG
Sbjct: 285 LCRAG 289
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 170/401 (42%), Gaps = 9/401 (2%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+ + S + G K+ ++ KM S G D Y ++ A +
Sbjct: 11 FVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLE 70
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E +R L TP + Y +L D L K GR EA+ M++K + Y SLI
Sbjct: 71 EMANRNL--TP-NVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLC 126
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
A +L +E G + D L+ + + + L V E + +
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQG-CIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++G K A+ ++ ++I G C+P VTY S+I+ +CR+ +A +
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M + G VV Y++++ + K R+ DA L+ +M KG P+V + SLMD R
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF-YNEFRMNGGVIDRAIAG 543
L + EM R+ +P +Y T++ Y RA + + KF E V+
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVS---FN 363
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
IM+ K+++ E ++L+++ + D +Y + ++ L
Sbjct: 364 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 183/439 (41%), Gaps = 73/439 (16%)
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
N+LH + E+M + + + Y +++ K G ++ AL K RK P
Sbjct: 60 NRLHEARKFL---EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALL--SKMRK-KCVP 113
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y L L K+ RA EA +M G + D Y +LI F + A +
Sbjct: 114 TAV-TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 172
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFS 375
F++ +G D L+ +EG +++ +D+ M + + + ++ ++++GF
Sbjct: 173 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 232
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ A+ + E++ G P VTY +++N +C++A A + +M +KG VV
Sbjct: 233 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVV 292
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK----- 490
++S++ + R+ DA+ ++ +M+ K C P V+ YN+++D + RA L + K
Sbjct: 293 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEE 352
Query: 491 ----------------------------LWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
L +E RR+ PD V YTTVI R ++ D
Sbjct: 353 MDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDE 412
Query: 523 CVKFYNEF-------------------RMNGGVIDRAIA-------------GIMVGVFS 550
+ Y + N G++DRA +++ F
Sbjct: 413 ACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFR 472
Query: 551 KLSQIEELVKLLQDMKSEG 569
K ++ E+ +LL DM G
Sbjct: 473 KANRDEDARELLDDMVQRG 491
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 168/403 (41%), Gaps = 30/403 (7%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
+ VP A ++S + G+ K + E AYD E P+ T LI +SKK
Sbjct: 108 RKKCVPTAVTYNSLISGLCKAERASE-AYDLLEEMV-YSGCIPDIFTYTTLITGFCKSKK 165
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFN 190
D + + E PD T S L+ + + K A L I G + +N
Sbjct: 166 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
S + G+ ++ + + E+M G D Y +M + K+ + L + +
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285
Query: 251 KL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
L D F++ M D L + R +A+ +M+ K P++Y ++ +I
Sbjct: 286 GLTPDVVTFTSLM-----DGLCRENRLSDAVHILGEMRRKSC--SPTVY-----TYNTIL 333
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE-EGLVE-----KTLDVVESMKNAKLKI 362
+ +EA K ML + + +V I GL + + +++VE + +
Sbjct: 334 DGYCRANQLEEA-RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNP 392
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQ-GCIPGQVTYASIINAYCRIALYSKAEKV 421
+ +++G + + A +VY +++ + GC+P +TY++++ C + +A +
Sbjct: 393 DVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA-RG 451
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+IE KG + Y+ ++ + K R DA L+ M +G
Sbjct: 452 YIE---KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 1/197 (0%)
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+ C VTY S+I C++ +A +M KGF V Y++++ R+
Sbjct: 4 TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+A + +M + PNV Y L+D + + + L +M R+K P V+Y ++I
Sbjct: 64 EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLI 122
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
S +A E +G + D ++ F K + ++ +++ + + + G +
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182
Query: 572 LDERLYHSAMNALRDAG 588
D Y ++ L G
Sbjct: 183 PDVVTYSCLIDGLCKEG 199
>gi|225446761|ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
[Vitis vinifera]
gi|302143502|emb|CBI22063.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 164/336 (48%), Gaps = 18/336 (5%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAE 314
FS + +L + GK G +A + F DM +KG PS+ + +L+ ++ + AE
Sbjct: 138 FSEMDFLMLVTAYGKQGDFNKAERVFGDMHKKGY--SPSVISHTALMEAYGKGKQYNKAE 195
Query: 315 ELFKEAEEKGMLRDPE---VCLKLVLMYIEEG----LVEKTLDVVESMKNAKLKISDCIS 367
+F+ G PE + +L+L EG E+T + + + + LK +
Sbjct: 196 SVFRRMLSSG----PEPSALTYQLILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMF 251
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++ + K Y A K++ + +G VTY S+++ Y + K + +MQ+
Sbjct: 252 HMMIYMYRKAGNYEKARKIFGLMRERGVPQSTVTYNSLMSFETN---YKEVSKTYDQMQR 308
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G VV+Y+ ++ YGK R +A+ + +M G P YN L+D + + Q
Sbjct: 309 AGLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 368
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
++K M R + TPD SYTT++SAY A + + KF+ + +G + G ++
Sbjct: 369 ARTVFKSMRRDRCTPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIK 428
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++K+S +E++++ ++M+ G K ++ +Y + M+A
Sbjct: 429 GYAKISNLEKMMEKYEEMQVHGIKANQAIYTAMMDA 464
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 155/355 (43%), Gaps = 9/355 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
+ ++ AY K GD K +F + + + S + L ++ GK + +A FR
Sbjct: 143 FLMLVTAYGKQGDFNKAERVFGDMHKKGYSPSVIS---HTALMEAYGKGKQYNKAESVFR 199
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA--EEKGMLR-DPEVCLKLVLMYI 340
M G Y ++ F + K AEE F+ +EK L+ D ++ ++ MY
Sbjct: 200 RMLSSGPEPSALTYQLILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHMMIYMYR 259
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ G EK + M+ + S +++ S Y K Y+Q+ G P V
Sbjct: 260 KAGNYEKARKIFGLMRERGVPQSTVTYNSLM---SFETNYKEVSKTYDQMQRAGLRPDVV 316
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
+YA +INAY + +A VF EM G AY+ ++ + +G + A + M
Sbjct: 317 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKSM 376
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ C P++ Y +++ + A ++ EK ++ +++ P+ V+Y T+I Y +
Sbjct: 377 RRDRCTPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKISNL 436
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+ ++ Y E +++G ++AI M+ + K V ++M G D +
Sbjct: 437 EKMMEKYEEMQVHGIKANQAIYTAMMDAYGKNKDFGSAVFWFKEMGFCGVPPDRK 491
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 163/358 (45%), Gaps = 19/358 (5%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM-YKILC 266
V+ M G + +MEAY K K ++F R L S P + + Y+++
Sbjct: 162 VFGDMHKKGYSPSVISHTALMEAYGKGKQYNKAESVF----RRMLSSGPEPSALTYQLIL 217
Query: 267 DSLGKSGRAFEALKFFRDM--KEKGILE-DPSIYASLICSFASITEVKLAEELFKEAEEK 323
+ + EA + F + EK L+ D ++ +I + + A ++F E+
Sbjct: 218 KIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLMRER 277
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWA 382
G+ + L+ V KT D M+ A L+ D +S A+ +N + K R
Sbjct: 278 GVPQSTVTYNSLMSFETNYKEVSKTYD---QMQRAGLR-PDVVSYALLINAYGKARREEE 333
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC---VVAYSS 439
A+ V+E+++ G P Y +++A+ + +A VF M++ D+C + +Y++
Sbjct: 334 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKSMRR---DRCTPDICSYTT 390
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
M++ Y + A ++K G EPNV Y +L+ + + NL ++ + ++EM+
Sbjct: 391 MLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEMQVHG 450
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ ++ YT ++ AY + ++F V ++ E G DR I++ + ++ EE
Sbjct: 451 IKANQAIYTAMMDAYGKNKDFGSAVFWFKEMGFCGVPPDRKATNILLSLAKTEAEKEE 508
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 70/159 (44%), Gaps = 3/159 (1%)
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
Q +D + + +V YGK G A + M KG P+V + +LM+ +G+ K
Sbjct: 133 QPWWDFSEMDFLMLVTAYGKQGDFNKAERVFGDMHKKGYSPSVISHTALMEAYGKGKQYN 192
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAY---NRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ E +++ M P ++Y ++ + N+ +E + + + + D+ +
Sbjct: 193 KAESVFRRMLSSGPEPSALTYQLILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFH 252
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+M+ ++ K E+ K+ M+ G Y+S M+
Sbjct: 253 MMIYMYRKAGNYEKARKIFGLMRERGVPQSTVTYNSLMS 291
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/533 (20%), Positives = 216/533 (40%), Gaps = 42/533 (7%)
Query: 86 FLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSE-DFK 144
F H +P+ Q LA + P ++ L R L+ + V L E
Sbjct: 11 FPHSYFPNPKPQHLAAPAAATTRPESPNAPNPASAHL--RRLIAREDLAGAVRLVERSGS 68
Query: 145 IYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKL-HM- 201
PD + C++L+ + C R R A L + + + A+N+ + GY + H+
Sbjct: 69 CDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD 128
Query: 202 ---------------YYSTILVY-----EKMKSAGIVLDS----GC------YCQIMEAY 231
Y T L+ ++ A +LD GC Y ++EA
Sbjct: 129 AARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAM 188
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ E+ A+ E +++ TP + Y ++ + + + GR +A + + G
Sbjct: 189 CRNSGFEQAMAVLDEMRAKG--CTP-NIVTYNVIINGMCREGRVDDARELLNRLPSYGFQ 245
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
D Y +L+ + EELF E EK + + L+ + G+VE+ + V
Sbjct: 246 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 305
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+E M + + ++N K+ A K+ + S GC P ++Y +++ CR
Sbjct: 306 LEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCR 365
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ A+++ EM + V +++ + + + G I A+ L+ +M GC V
Sbjct: 366 AERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVT 425
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
YN+L++ ++ +L++ M P+ ++YTT+++ A D + E
Sbjct: 426 YNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEML 482
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ ++V F + +EE ++L++ M G + Y++ ++ +
Sbjct: 483 RGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGI 535
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 138/327 (42%), Gaps = 38/327 (11%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+T + I+ +S+ K GR +A K DM G D Y +++ A+EL
Sbjct: 317 NTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELL 376
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E + + + ++GL+E+ + ++E M + A+VNGF +
Sbjct: 377 NEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQ 436
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
+A++++ S C P +TY +++ C A ++ EM + VV +
Sbjct: 437 GHIDSALELFR---SMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTF 493
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+ +V+ + + G + +A+ LV +M GC PN+ YN+L+D + + +L +
Sbjct: 494 NVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVS 553
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ V+PD ++++++I G+ SK +IEE
Sbjct: 554 KGVSPDVITFSSII-----------------------------------GILSKEDRIEE 578
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNAL 584
V+L ++ G + +Y+ + L
Sbjct: 579 AVQLFHVVQDIGMRPKAVVYNKILLGL 605
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/523 (19%), Positives = 211/523 (40%), Gaps = 85/523 (16%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE--FRPEKSTLKLLIRYLVQSKKWDS 135
P+ ++ ++GM ++ + + A + N +LP F+P+ + L++ L SK+WD
Sbjct: 211 PNIVTYNVIINGMCREGRVDD-ARELLN---RLPSYGFQPDTVSYTTLLKGLCASKRWDD 266
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGG 195
+ L + N +P+ T + L++ F G
Sbjct: 267 VEELFAEMMEKNCMPNEVT----------------FDMLIRFFCRGG------------- 297
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
M I V E+M G ++ C I+ + ++ CK ++D
Sbjct: 298 -----MVERAIQVLEQMTEHGCATNTT-LCNIV-----------INSI---CKQGRVDD- 336
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
AF+ L DM G D Y +++ A+E
Sbjct: 337 -------------------AFKLLN---DMGSYGCNPDTISYTTVLKGLCRAERWDDAKE 374
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L E + + + ++GL+E+ + ++E M + A+VNGF
Sbjct: 375 LLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFC 434
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ +A++++ S C P +TY +++ C A ++ EM + VV
Sbjct: 435 VQGHIDSALELFR---SMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVV 491
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
++ +V+ + + G + +A+ LV +M GC PN+ YN+L+D + + +L +
Sbjct: 492 TFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGL 551
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA--GIMVGVFSKLS 553
+ V+PD ++++++I ++ + V+ ++ + + G+ +A+ I++G K
Sbjct: 552 VSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQ-DIGMRPKAVVYNKILLG-LCKRC 609
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+I+ + M S G +E Y + L GL +AQ L
Sbjct: 610 EIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDL 652
>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/487 (23%), Positives = 206/487 (42%), Gaps = 71/487 (14%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYST 205
N+ P+ T S L+ + K ++A +LQ + ++ F+S + GY K M
Sbjct: 110 NLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKA 169
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ V +M ++ ++ Y +++ Y+K G+ + E KSR+L+ S ++ IL
Sbjct: 170 VDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEE---SNVIFDIL 226
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK-- 323
++L + GR EA DM KGI D YASLI + A + +E +EK
Sbjct: 227 LNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNI 286
Query: 324 ------------GMLR----DPE-VCLKLVLMYIEEGL-----VEKTLDVVESMKNAKLK 361
G+LR DP VC ++ IE GL E LD++ MK+ +
Sbjct: 287 RFDVVAYNALIKGLLRLGKYDPRYVCSRM----IELGLAPDCKTEDALDILNEMKSYGIM 342
Query: 362 ISDCISCAIVNGFSKRRGYWAA-----------------------------------VKV 386
+ ++ G K A +++
Sbjct: 343 PNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQI 402
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+E+L++ G Y ++I +CR+ + KA+ V EM ++G +V Y++++ Y
Sbjct: 403 HEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCT 462
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA----KNLRQVEKLWKEMERRKVTP 502
+ A+ ++M G PN+ YN+L+ A + + + EKL EM R + P
Sbjct: 463 GSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVP 522
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ +Y ++S Y R + + E G V +++ ++K ++ E +LL
Sbjct: 523 NAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELL 582
Query: 563 QDMKSEG 569
D+ ++G
Sbjct: 583 NDLLTKG 589
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 195/466 (41%), Gaps = 50/466 (10%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTIL 207
++PD TCS ++ R K E A+L G + H+ Y+TI+
Sbjct: 6 IMPDVVTCSSILYGFCRHGKLT-------------EAAVLFREMYEMGLDPNHVSYATII 52
Query: 208 --------------VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
+ +M GI D +M+ +K+G +++ +F KL+
Sbjct: 53 NSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETI--LKLN 110
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
P + Y L D K G+ A + M+++ + + ++S+I +A + A
Sbjct: 111 LAP-NCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKA 169
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
++ +E ++ ++ + V L+ Y + G + D + MK+ +L+ S+ I ++N
Sbjct: 170 VDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNN 229
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+ A + + S+G P V YAS+I+ Y + A + EM++K
Sbjct: 230 LKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFD 289
Query: 434 VVAYSSMVAMYGKTGR--------------------IRDAMWLVAKMKAKGCEPNVWIYN 473
VVAY++++ + G+ DA+ ++ +MK+ G PN YN
Sbjct: 290 VVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYN 349
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
L+ + + + E EM + P +++ ++ AY+R+ + D ++ + + +
Sbjct: 350 ILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVAS 409
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
G + + ++ VF +L + +L +M G D Y++
Sbjct: 410 GLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNA 455
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 139/304 (45%), Gaps = 8/304 (2%)
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI+ D +S++ F ++ A LF+E E G+ + ++ + G V +
Sbjct: 5 GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 64
Query: 349 LDVVESMKNAKLKISDCISCAIV-NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
++ M + D ++C V +G K A +V+E ++ P VTY+++++
Sbjct: 65 FNLQSQMVVRGISF-DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLD 123
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
YC++ AE V +M+++ V+ +SS++ Y K G + A+ ++ +M + P
Sbjct: 124 GYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMP 183
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
N +Y L+D + +A + KEM+ R++ V + +++ R D
Sbjct: 184 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLI 243
Query: 528 NEFRMNGGVIDRAI---AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ G ID I A ++ G F + +Q+ L ++Q+MK + + D Y++ + L
Sbjct: 244 IDMYSKG--IDPDIVNYASLIDGYFKEGNQLAAL-SIVQEMKEKNIRFDVVAYNALIKGL 300
Query: 585 RDAG 588
G
Sbjct: 301 LRLG 304
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 90/434 (20%), Positives = 175/434 (40%), Gaps = 58/434 (13%)
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
GI+ D I+ + + G + A LF E LD S Y + +SL KSGR
Sbjct: 5 GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVS---YATIINSLFKSGRV 61
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
EA M +GI D +++ + + K AEE+F+ + + + L
Sbjct: 62 MEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSAL 121
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ Y + G +E V++ M+ + + +I+NG++K+ AV V +++ +
Sbjct: 122 LDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNV 181
Query: 396 IPGQVTYASIINAY------------C-----------------------RIALYSKAEK 420
+P + YA +I+ Y C R+ +A
Sbjct: 182 MPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARS 241
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL----- 475
+ I+M KG D +V Y+S++ Y K G A+ +V +MK K +V YN+L
Sbjct: 242 LIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLL 301
Query: 476 -------------MDMHGRAKNLRQVEKL--WKEMERRKVTPDKVSYTTVISAYNRAREF 520
M G A + + + L EM+ + P+ V+Y +I +
Sbjct: 302 RLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAV 361
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ +E + V +V +S+ + ++++++ + + + G +L +Y++
Sbjct: 362 EKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTL 421
Query: 581 MNALRDAGLQMQAQ 594
+ G+ +A+
Sbjct: 422 ITVFCRLGMTRKAK 435
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 123/275 (44%)
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G++ D C ++ + G + + + M L + I+N K A
Sbjct: 5 GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 64
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+ Q++ +G VT ++++ ++ +AE+VF + + V YS+++
Sbjct: 65 FNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDG 124
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
Y K G++ A ++ KM+ + PNV ++S+++ + + L + + +EM +R V P+
Sbjct: 125 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPN 184
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+ Y +I Y +A E D+ F E + I I++ ++ +++E L+
Sbjct: 185 TIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLII 244
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
DM S+G D Y S ++ G Q+ A + Q
Sbjct: 245 DMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQ 279
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 183/443 (41%), Gaps = 44/443 (9%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTL--KL 122
+++ R+ + +P+ + + G K + Q++A D+ E K R E+S + +
Sbjct: 170 VDVLREMVQRNVMPNTIVYAILIDGYFKAGE-QDVADDFCKEMK---SRRLEESNVIFDI 225
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-- 180
L+ L + + D SL D + PD + L+ FK N L + I
Sbjct: 226 LLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDG-----YFKEGNQLAALSIVQE 280
Query: 181 ----DGEIALLAFNSAMGGYNKLHMY--------------------YSTILVYEKMKSAG 216
+ ++A+N+ + G +L Y + + +MKS G
Sbjct: 281 MKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYG 340
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
I+ ++ Y ++ K G EK + E + TP + +K L + +S +A
Sbjct: 341 IMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPIT---HKFLVKAYSRSEKAD 397
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+ L+ + G+ ++Y +LI F + + A+ + E ++G+ D L+
Sbjct: 398 KILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALI 457
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ--- 393
Y VEK L M + + ++ G S ++ E+L+S+
Sbjct: 458 RGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNE 517
Query: 394 -GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
G +P TY +++ Y R+ K + IEM KGF + Y+ +++ Y K+G++ +
Sbjct: 518 RGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIE 577
Query: 453 AMWLVAKMKAKGCEPNVWIYNSL 475
A L+ + KG PN + Y+ L
Sbjct: 578 ARELLNDLLTKGRIPNSFTYDIL 600
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 104/242 (42%), Gaps = 35/242 (14%)
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+I G +P VT +SI+ +CR ++A +F EM + G D V+Y++++ K+GR
Sbjct: 1 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60
Query: 450 IRDAMWLVAKMKAKGCE-----------------------------------PNVWIYNS 474
+ +A L ++M +G PN Y++
Sbjct: 61 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 120
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L+D + + + E + ++ME+ V P+ ++++++I+ Y + V E
Sbjct: 121 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 180
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ + + I++ + K + + ++MKS + ++ +N L+ G +A+
Sbjct: 181 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 240
Query: 595 WL 596
L
Sbjct: 241 SL 242
>gi|34393621|dbj|BAC83297.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 657
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 181/441 (41%), Gaps = 45/441 (10%)
Query: 156 SRLVASC-----VRARKFKIANTLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILV 208
SRL+ +C V A A + T+ ++ ++++N + GY + + +
Sbjct: 220 SRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMAR 279
Query: 209 YEKMK-SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+M+ A + D Y +M+ +Y G LF E + R + + H Y ++
Sbjct: 280 LSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGND-IPQHAYVLVIG 338
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+L K G+ FE + F M ++G + +IY +LI S K A LF
Sbjct: 339 ALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMALF---------- 388
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
E MK++ LK+ IVN + AV +
Sbjct: 389 -------------------------ERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACF 423
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+G + Y S+I+ + + + +++++F EM KGF Y+ ++ K+
Sbjct: 424 RSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKS 483
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR+ DA L +M+ GC+ V+ Y L+D + + K W M + +TP ++
Sbjct: 484 GRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAF 543
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T+ S + +F + +E GVI M+ V K + ++ KL +
Sbjct: 544 RTLASGLCLSGKFSRACRILDEL-APMGVIPETAHEDMINVLCKAGRFKQACKLADGIVQ 602
Query: 568 EGTKLDERLYHSAMNALRDAG 588
+G ++ R+ +NALR AG
Sbjct: 603 KGREIPGRVRTMMINALRKAG 623
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 141/315 (44%), Gaps = 10/315 (3%)
Query: 294 PSIYASLICSFASITEVKLAEEL---FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
PS ASLI S A++ LAEEL +K G+ + L+ + GL++ ++
Sbjct: 186 PSSSASLIRSLAAL---GLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVN 242
Query: 351 VVESMKNAKLKISDCISCAI-VNGFSKR-RGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
V ++M D +S I + G+ + R + A ++ E P +VTY +++
Sbjct: 243 VFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQC 302
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVV--AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
+ + +F EM+++G + AY ++ K G+ + M + +M +GC
Sbjct: 303 HYSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCA 362
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
N IY +L+D G+ ++ L++ M+ + D V+Y +++ R + D V
Sbjct: 363 ANAAIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVAC 422
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ + G ++ ++ F K +++ +L ++M ++G D Y+ ++ L
Sbjct: 423 FRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAK 482
Query: 587 AGLQMQAQWLQQNFE 601
+G A L + E
Sbjct: 483 SGRMDDACALYKRME 497
>gi|125558386|gb|EAZ03922.1| hypothetical protein OsI_26055 [Oryza sativa Indica Group]
Length = 658
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 181/441 (41%), Gaps = 45/441 (10%)
Query: 156 SRLVASC-----VRARKFKIANTLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILV 208
SRL+ +C V A A + T+ ++ ++++N + GY + + +
Sbjct: 221 SRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMAR 280
Query: 209 YEKMK-SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+M+ A + D Y +M+ +Y G LF E + R + + H Y ++
Sbjct: 281 LSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGND-IPQHAYVLVIG 339
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+L K G+ FE + F M ++G + +IY +LI S K A LF
Sbjct: 340 ALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMALF---------- 389
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
E MK++ LK+ IVN + AV +
Sbjct: 390 -------------------------ERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACF 424
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+G + Y S+I+ + + + +++++F EM KGF Y+ ++ K+
Sbjct: 425 RSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKS 484
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR+ DA L +M+ GC+ V+ Y L+D + + K W M + +TP ++
Sbjct: 485 GRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAF 544
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T+ S + +F + +E GVI M+ V K + ++ KL +
Sbjct: 545 RTLASGLCLSGKFSRACRILDEL-APMGVIPETAHEDMINVLCKAGRFKQACKLADGIVQ 603
Query: 568 EGTKLDERLYHSAMNALRDAG 588
+G ++ R+ +NALR AG
Sbjct: 604 KGREIPGRVRTMMINALRKAG 624
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 143/317 (45%), Gaps = 14/317 (4%)
Query: 294 PSIYASLICSFASITEVKLAEEL---FKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKT 348
PS ASLI S A++ LAEEL +K G+ +P + L+ + GL++
Sbjct: 187 PSSSASLIRSLAAL---GLAEELLWAWKAMRLAGV--EPSRLIYNCLLDGLVNAGLLDTA 241
Query: 349 LDVVESMKNAKLKISDCISCAI-VNGFSKR-RGYWAAVKVYEQLISQGCIPGQVTYASII 406
++V ++M D +S I + G+ + R + A ++ E P +VTY +++
Sbjct: 242 VNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLM 301
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVV--AYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+ + +F EM+++G + AY ++ K G+ + M + +M +G
Sbjct: 302 QCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRG 361
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
C N IY +L+D G+ ++ L++ M+ + D V+Y +++ R + D V
Sbjct: 362 CAANAAIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAV 421
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + G ++ ++ F K +++ +L ++M ++G D Y+ ++ L
Sbjct: 422 ACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGL 481
Query: 585 RDAGLQMQAQWLQQNFE 601
+G A L + E
Sbjct: 482 AKSGRMDDACALYKRME 498
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 211/493 (42%), Gaps = 48/493 (9%)
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCV-----RARKFKIANTLLQVFITD 181
LV+ K + +++SLS+ + ++PD T S L+ +C A F + +L++
Sbjct: 20 LVKMKHYPTVISLSKQMEAKGIVPDLVTLSILI-NCFCHLGQMAFSFSVLGKILKLGYQP 78
Query: 182 GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
I L N+ M G ++ ++K+ + G +D Y ++ KIG++
Sbjct: 79 NTIIL---NTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAI 135
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
L + R ST MY + D L K EA + +M +GI D Y +LI
Sbjct: 136 KLLRTIEDR---STRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLI 192
Query: 302 CSFASITEV-----------------------KLAEELFKEA---EEKGMLR-------D 328
C F ++ L + L KE E K +L
Sbjct: 193 CGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVK 252
Query: 329 PEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
P+V + +LM Y G V+K + M + I+NG K + A+ +
Sbjct: 253 PDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNL 312
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+++ + IP VTY+S+I+ C++ + + EM +G +V Y+S++ K
Sbjct: 313 LREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCK 372
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
+ A+ L KMK +G +PN + Y +L+D + L++ + L++ + + D +
Sbjct: 373 NQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWT 432
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
YT +IS + FD + ++ NG + + I++ + + ++ KLL +M
Sbjct: 433 YTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMI 492
Query: 567 SEGTKLDERLYHS 579
++G L R +HS
Sbjct: 493 AKGL-LPFRNFHS 504
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 176/423 (41%), Gaps = 19/423 (4%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD-------SGCYCQIMEAYYKIGDSE 238
++ F +G K+ Y + I + ++M++ GIV D C+C + + +
Sbjct: 10 IIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLG 69
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
K+ KL P +T + L L G ++L F + +G D Y
Sbjct: 70 KIL---------KLGYQP-NTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYG 119
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
L+ I E + A +L + E++ D + ++ ++ LV++ D+ M NA
Sbjct: 120 ILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEM-NA 178
Query: 359 KLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ D I+ ++ GF A + ++I + P TY ++I+ C+ +
Sbjct: 179 RGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKE 238
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
++ + M +KG VV YS ++ Y G ++ A + M G P+V+ YN +++
Sbjct: 239 SKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIIN 298
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ K + + L +EM + + PD V+Y+++I + + E G
Sbjct: 299 GLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPA 358
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQ 597
+ ++ K +++ + L MK G + ++ Y + ++ L G + Q L
Sbjct: 359 NLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALF 418
Query: 598 QNF 600
Q+
Sbjct: 419 QHL 421
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 170/426 (39%), Gaps = 62/426 (14%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP+ +I L + K D L + + PD T + L+ F +A
Sbjct: 147 RPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICG------FCLAGQ 200
Query: 174 LLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSA----------GIVLDSGC 223
L++ F E+ L N + YN L T+ K+K + G+ D
Sbjct: 201 LMEAFGLLNEMILKNINPNIYTYNTL---IDTLCKEGKVKESKNLLAVMTKKGVKPDVVI 257
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y +M+ Y +G+ +K +FL ++ +S Y I+ + L K R EA+ R
Sbjct: 258 YSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYS---YNIIINGLCKGKRVDEAMNLLR 314
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+M K ++ D Y+SLI + + +L KE +G
Sbjct: 315 EMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRG------------------- 355
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
+ A L + ++++G K + A+ ++ ++ +G P + TY
Sbjct: 356 ------------QPANLVTYN----SLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYT 399
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
++I+ C+ K + +F + KG+ V Y+ M++ K G +A+ + +KM+
Sbjct: 400 ALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDN 459
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
GC PN + ++ + EKL EM + + P + ++ S N+ +
Sbjct: 460 GCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLPFRNFHSERSSVTNK-----VI 514
Query: 524 VKFYNE 529
V F++E
Sbjct: 515 VNFHSE 520
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 146/402 (36%), Gaps = 76/402 (18%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I+L R ++ PD + + + G+ KD E AYD Y+E F P+ T LI
Sbjct: 135 IKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDE-AYDLYSEMNARGIF-PDVITYTTLI 192
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-E 183
+ + L + + N+ P+ +T + L+ + + K K + LL V G +
Sbjct: 193 CGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVK 252
Query: 184 IALLAFNSAMGGY---------------------NKLHMYYSTIL--------------V 208
++ ++ M GY N Y+ I+ +
Sbjct: 253 PDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNL 312
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+M ++ D+ Y +++ K+G + L E R P + Y L D
Sbjct: 313 LREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHR---GQPANLVTYNSLLDG 369
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L K+ +A+ F MKE+GI + Y +LI +K + LF+ KG D
Sbjct: 370 LCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCID 429
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
V Y +++G K + A+ +
Sbjct: 430 -------VWTYT----------------------------VMISGLCKEGMFDEALAMKS 454
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++ GCIP VT+ II + KAEK+ EM KG
Sbjct: 455 KMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGL 496
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 170/401 (42%), Gaps = 9/401 (2%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+ + S + G K+ ++ KM S G D Y ++ A +
Sbjct: 11 FVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLE 70
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E +R L TP + Y +L D L K GR EA+ M++K + Y SLI
Sbjct: 71 EMANRNL--TP-NVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLC 126
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
A +L +E G + D L+ + + + L V E + +
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQG-CIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++G K A+ ++ ++I G C+P VTY S+I+ +CR+ +A +
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M + G VV Y++++ + K R+ DA L+ +M KG P+V + SLMD R
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF-YNEFRMNGGVIDRAIAG 543
L + EM R+ +P +Y T++ Y RA + + KF E V+
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVS---FN 363
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
IM+ K+++ E ++L+++ + D +Y + ++ L
Sbjct: 364 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 183/439 (41%), Gaps = 73/439 (16%)
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
N+LH + E+M + + + Y +++ K G ++ AL K RK P
Sbjct: 60 NRLHEARKFL---EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALL--SKMRK-KCVP 113
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y L L K+ RA EA +M G + D Y +LI F + A +
Sbjct: 114 TAV-TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 172
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFS 375
F++ +G D L+ +EG +++ +D+ M + + + ++ ++++GF
Sbjct: 173 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 232
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ A+ + E++ G P VTY +++N +C++A A + +M +KG VV
Sbjct: 233 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVV 292
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK----- 490
++S++ + R+ DA+ ++ +M+ K C P V+ YN+++D + RA L + K
Sbjct: 293 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEE 352
Query: 491 ----------------------------LWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
L +E RR+ PD V YTTVI R ++ D
Sbjct: 353 MDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDE 412
Query: 523 CVKFYNEF-------------------RMNGGVIDRAIA-------------GIMVGVFS 550
+ Y + N G++DRA +++ F
Sbjct: 413 ACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFR 472
Query: 551 KLSQIEELVKLLQDMKSEG 569
K ++ E+ +LL DM G
Sbjct: 473 KANRDEDARELLDDMVQRG 491
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 168/403 (41%), Gaps = 30/403 (7%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
+ VP A ++S + G+ K + E AYD E P+ T LI +SKK
Sbjct: 108 RKKCVPTAVTYNSLISGLCKAERASE-AYDLLEEMV-YSGCIPDIFTYTTLITGFCKSKK 165
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFN 190
D + + E PD T S L+ + + K A L I G + +N
Sbjct: 166 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
S + G+ ++ + + E+M G D Y +M + K+ + L + +
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285
Query: 251 KL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
L D F++ M D L + R +A+ +M+ K P++Y ++ +I
Sbjct: 286 GLTPDVVTFTSLM-----DGLCRENRLSDAVHILGEMRRKSC--SPTVY-----TYNTIL 333
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE-EGLVE-----KTLDVVESMKNAKLKI 362
+ +EA K ML + + +V I GL + + +++VE + +
Sbjct: 334 DGYCRANQLEEA-RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNP 392
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQ-GCIPGQVTYASIINAYCRIALYSKAEKV 421
+ +++G + + A +VY +++ + GC+P +TY+++I C + +A +
Sbjct: 393 DVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA-RG 451
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+IE KG + Y+ ++ + K R DA L+ M +G
Sbjct: 452 YIE---KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 1/197 (0%)
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+ C VTY S+I C++ +A +M KGF V Y++++ R+
Sbjct: 4 TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+A + +M + PNV Y L+D + + + L +M R+K P V+Y ++I
Sbjct: 64 EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLI 122
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
S +A E +G + D ++ F K + ++ +++ + + + G +
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182
Query: 572 LDERLYHSAMNALRDAG 588
D Y ++ L G
Sbjct: 183 PDVVTYSCLIDGLCKEG 199
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/471 (21%), Positives = 196/471 (41%), Gaps = 4/471 (0%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T LI + +W V + ++ + +++LPD T S L+ S + K K A +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G+ + ++ + GY +++ M GI D + +++AY
Sbjct: 347 FDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 406
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G +K +F E + + + Y+ + +L + G+ +A++ F M ++G+ D
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVT---YRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y LI F + + A+EL E GM D ++ + G V ++ +
Sbjct: 464 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFD 523
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
N L + + +++G+ A++V++ ++S G P V Y +++N YC+I
Sbjct: 524 LTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIG 583
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ +F EM QKG + Y+ ++ + GR A +M G N YN
Sbjct: 584 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYN 643
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
++ + + + L+KE+ V + ++ T+I+ + R + + +
Sbjct: 644 IVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRS 703
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G V IM+ K +EE + M++ G + D RL + + L
Sbjct: 704 GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 754
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 153/335 (45%), Gaps = 2/335 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAEELFKE 319
Y IL SL G++ +A R M E G + P + Y+++I F +V A +LFKE
Sbjct: 185 YSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKE 244
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
++G+ D +V + ++K + M N + ++ ++ G+S
Sbjct: 245 MVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQ 304
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ AV+V++++ +P VT + ++ + C+ +A VF M KG + V +Y+
Sbjct: 305 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTI 364
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
M+ Y G + D L M G P+++ +N L+ + L + ++ EM
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
V PD V+Y TVI+A R + D ++ +N+ G D+ ++ F + +
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAK 484
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+L+ ++ + G LD + S +N L G M AQ
Sbjct: 485 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 519
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 118/520 (22%), Positives = 214/520 (41%), Gaps = 79/520 (15%)
Query: 150 PDAHTCSRLVASCVRARKFK-------------------IANTLLQVFI----TDGEIAL 186
P +HT + L+ C RA + + IAN LL+ F TD + +
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI 168
Query: 187 LAFNSAMGGYNKLHMYYSTIL--------------VYEKMKSAGIVL--DSGCYCQIMEA 230
L + G YS +L + M G V D Y +++
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDG 228
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
++K GD K LF E R + P Y + +L K+ +A F R M KG+
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGI---PPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 285
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
L + Y +LI ++S + K A +FKE +L D L+ + G +++ D
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 345
Query: 351 VVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
V ++M K + + S I +NG++ + +++ ++ G P T+ +I AY
Sbjct: 346 VFDTMA-MKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 404
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ KA +F EM+ G VV Y +++A + G++ DAM +M +G P+
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464
Query: 470 WIYNSLMD---MHG---RAKNL--------------------RQVEKLWKEMERRKV--- 500
+ Y+ L+ HG +AK L + KL + M+ + +
Sbjct: 465 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 524
Query: 501 ------TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
P V Y+ ++ Y + + ++ ++ G + + G +V + K+ +
Sbjct: 525 TVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGR 584
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
I+E + L ++M +G K LY+ ++ L +AG + A+
Sbjct: 585 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 148/343 (43%), Gaps = 7/343 (2%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALK-FFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ H+ K C++ R EAL E G + D Y+ L+ S + A++
Sbjct: 148 IANHLLKGFCEA----KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203
Query: 316 LFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L + E G + P+V ++ + +EG V K D+ + M + ++V+
Sbjct: 204 LLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHA 263
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
K R A Q++++G +P TY ++I Y + +A +VF EM++
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VV S ++ K G+I++A + M KG PNV+ Y +++ + L + L+
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFD 383
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
M + PD ++ +I AY D + +NE R +G D ++ ++
Sbjct: 384 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++++ ++ M +G D+ YH + G ++A+ L
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/539 (21%), Positives = 210/539 (38%), Gaps = 62/539 (11%)
Query: 84 DSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYL---------------- 127
D L + +P + +++ A K P+FRP+ S+ ++ L
Sbjct: 102 DLVLRNLRLNPDA---SLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNEL 158
Query: 128 --------VQSKKWDSIVSLSEDFKIYNVLPD--------------AHTCSRLVASCVRA 165
+ S WD +VS+ +F + D A + C R
Sbjct: 159 VVLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRV 218
Query: 166 RKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
+ N+LL + +GE + +LVYE+M + GI+ D Y
Sbjct: 219 PSLRSCNSLLSNLVQNGEA------------------FKALLVYEQMIALGILPDIFSYT 260
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
++ AY K G +V F K + + Y L D G A K M
Sbjct: 261 IMVNAYCKEG---RVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALM 317
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
EKGI E+ Y LI + +++ AE+L EK + D V L+ Y G V
Sbjct: 318 SEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRV 377
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+ L + ++M LK++ I +++NG+ K A +V + P Y ++
Sbjct: 378 DDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTL 437
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
++ +C+ + KA K+ EM KG + VV Y++++ G + A+ + M +G
Sbjct: 438 LDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGV 497
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
PN Y +L+D + + +WK+ + T Y T+I + + + +
Sbjct: 498 APNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQE 557
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + + G D ++ + K+ + E +KL + +G +Y+S + +
Sbjct: 558 IFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGV 616
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 214/486 (44%), Gaps = 52/486 (10%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
+D + ++P R S L+ LVQ+ + + + E +LPD + + +V
Sbjct: 208 VFDNMGKCGRVPSLRSCNS----LLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMV 263
Query: 160 -ASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
A C R + N + ++ + E ++ +NS + GY L V M GI
Sbjct: 264 NAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIP 323
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
+S Y +++ Y K G E+ L + C K + H+Y +L + +GR +A
Sbjct: 324 ENSRTYTLLIKGYCKRGQMEQAEKL-IGCMMEK--NLFVDEHVYGVLIHAYCTAGRVDDA 380
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP--------- 329
L+ M + G+ + I SLI + + V A E+ ++ + D
Sbjct: 381 LRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDG 440
Query: 330 -----------EVCLKL--------VLMY-------IEEGLVEKTLDVVESMKNAKLKIS 363
++C ++ V+ Y G VE L + M + +
Sbjct: 441 FCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPN 500
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+ C +++ F K + A+ +++ +S+G Y ++I +C++ +A+++F+
Sbjct: 501 EVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFL 560
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+M++ GF + Y +++ Y K G + +A+ L + G + +YNSL+ R++
Sbjct: 561 KMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSE 620
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE-FRMNGGVIDRAIA 542
L+++ L EM+ R+++P+ V+Y ++I+ + D K YN F+M ID+ IA
Sbjct: 621 ELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMD---KAYNAYFKM----IDKGIA 673
Query: 543 -GIMVG 547
I++G
Sbjct: 674 PNIIIG 679
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 104/510 (20%), Positives = 202/510 (39%), Gaps = 56/510 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD+ +++ L G K + +A KL + K ++ Y K +
Sbjct: 429 PDSYGYNTLLDGFCKQED--------FIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVG 480
Query: 138 SLSEDFKIYNVL------PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFN 190
+ I+N++ P+ T L+ + + F A + + ++ G ++ +N
Sbjct: 481 HVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYN 540
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ + G+ K+ ++ KMK G D Y +++ Y K+G+ V AL L+ S
Sbjct: 541 TMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNL--VEALKLKDMSE 598
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ D ST MY L + +S + +MK + + + Y SLI + +
Sbjct: 599 R-DGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMM 657
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK----------------------- 347
A + + +KG+ + + K+V G +++
Sbjct: 658 DKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVEL 717
Query: 348 ---------TLDVVESM--KNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGC 395
T +V+S K + IS+ I I + G K + ++ L+ +G
Sbjct: 718 PKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGF 777
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P TY S+I+A + ++A + +M G +V Y++++ K+G + A
Sbjct: 778 CPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARR 837
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L K+ KG P V YN+L+D + + + +L +M + P ++Y+T+I
Sbjct: 838 LFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLY 897
Query: 516 RAREFDMCVKFYNEFRMNG---GVIDRAIA 542
+ + V NE G V+D +A
Sbjct: 898 MEGKSEQSVGLLNEMMKAGKGSSVMDPLVA 927
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 101/514 (19%), Positives = 198/514 (38%), Gaps = 46/514 (8%)
Query: 115 PEKS-TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV-ASCVRAR---KFK 169
PE S T LLI+ + + + L N+ D H L+ A C R +
Sbjct: 323 PENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALR 382
Query: 170 IANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
I + +L+V + ++ + NS + GY KL V MK + DS Y +++
Sbjct: 383 IRDAMLKVGL---KMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLD 439
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
+ K D K L E ++ ++ F+ Y L +L G AL + M ++G
Sbjct: 440 GFCKQEDFIKAFKLCDEMHNKGVN---FTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRG 496
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
+ + Y +L+ +F + A ++K+A KG + + ++ + + + +
Sbjct: 497 VAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQ 556
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
++ MK + +++G+ K A+K+ + G Y S+I
Sbjct: 557 EIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGV 616
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
R K + EM+ + VV Y S++A + G + A KM KG PN+
Sbjct: 617 FRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNI 676
Query: 470 WIYNSLMD---MHGRAKN----LRQVEKL----------------WKEMERRKVT----- 501
I + ++ HG+ L Q+ + + +E +K+
Sbjct: 677 IIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGK 736
Query: 502 -------PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+ + Y I+ +++ D + ++ + G D ++ S + +
Sbjct: 737 KAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGK 796
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ E L DM + G + +Y++ +N L +G
Sbjct: 797 VNEAFCLRDDMINAGLVPNIVVYNALINGLCKSG 830
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/452 (17%), Positives = 177/452 (39%), Gaps = 50/452 (11%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+N+ + G+ K + + ++M + G+ Y +++ + +G E ++
Sbjct: 433 GYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLM 492
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
R + + Y L D+ K G A+ ++D KG + ++Y ++IC F +
Sbjct: 493 HKRGVAPNEVT---YCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKM 549
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++ A+E+F + +E G D L+ Y + G ++VE++K + D IS
Sbjct: 550 EKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVG------NLVEALKLKDMSERDGIS 603
Query: 368 CA------IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++ G + + ++ ++ P VTY S+I +C + KA
Sbjct: 604 SSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNA 663
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM--------KAKGCE------- 466
+ +M KG ++ S +V+ + G+I +A ++ ++ A E
Sbjct: 664 YFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLR 723
Query: 467 --------------------PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
N +YN + ++KN+ V ++ ++ + PD +
Sbjct: 724 HLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYT 783
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y ++I A + + + ++ G V + + ++ K ++ +L +
Sbjct: 784 YCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLA 843
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+G Y++ ++ G +A L+
Sbjct: 844 RKGLSPTVVTYNTLIDGYCKGGRTTEALELKD 875
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/522 (21%), Positives = 225/522 (43%), Gaps = 52/522 (9%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
ELA+ Y E + TL +++ L + K + + + + V PD T +
Sbjct: 217 ELAWGVYQEISR-SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNT 275
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+++ + A L+ G + +N+ + G K Y V+ +M +G
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGR 274
+ DS Y ++ K GD + +F + +SR + D FS+ M +SG
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM-----SLFTRSGN 390
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLI-----------------------CSFASITEVK 311
+AL +F +KE G++ D IY LI C+ +T
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 312 L------------AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
+ A++LF E E+ + D L+ + + G ++ +++ + MK +
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+++ +++GF K A +++ ++S+ +P ++Y+ ++NA C ++A
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAF 570
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
+V+ EM K V+ +SM+ Y ++G D + KM ++G P+ YN+L+
Sbjct: 571 RVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGF 630
Query: 480 GRAKNLRQVEKLWKEMERRK--VTPDKVSYTTVISAY---NRAREFDMCVKFYNEFRMNG 534
R +N+ + L K+ME + + PD +Y +++ + N+ +E ++ ++ E +N
Sbjct: 631 VREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNP 690
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
DR+ M+ F + E ++ +M G D++
Sbjct: 691 ---DRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 182/402 (45%), Gaps = 14/402 (3%)
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKI-----YNVLPDAHTCSRLVASCVRARKFKIAN 172
S LLIR VQ++K + E F + + V DA C+ L+ S VR ++A
Sbjct: 166 SVFDLLIRTYVQARK---LREAHEAFTLLRSKGFTVSIDA--CNALIGSLVRIGWVELAW 220
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ Q G I + N + K +++ G+ D Y ++ AY
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
G E+ L + ++ Y + + L K G+ A + F +M G+
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYT---YNTVINGLCKHGKYERAKEVFAEMLRSGLS 337
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
D + Y SL+ +V E++F + + ++ D ++ ++ G ++K L
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 397
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
S+K A L + I ++ G+ ++ A+ + +++ QGC VTY +I++ C+
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ +A+K+F EM ++ + ++ + K G +++AM L KMK K +V
Sbjct: 458 RKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVT 517
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
YN+L+D G+ ++ +++W +M +++ P +SY+ +++A
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 133/292 (45%)
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ S++ LI ++ +++ A E F KG + C L+ + G VE V
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ + + + I+ +VN K Q+ +G P VTY ++I+AY
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
L +A ++ M KGF V Y++++ K G+ A + A+M G P+ Y
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
SL+ + ++ + EK++ +M R V PD V +++++S + R+ D + ++N +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G + D I I++ + + I + L +M +G +D Y++ ++ L
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/479 (19%), Positives = 189/479 (39%), Gaps = 55/479 (11%)
Query: 110 LPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFK 169
P F+ +L +I LV+S + L DA +C + + +
Sbjct: 106 FPNFKHTSLSLSAMIHILVRSGR----------------LSDAQSCLLRMIRRSGVSRLE 149
Query: 170 IANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
I N+L F G + F+ + Y + + ++S G + ++
Sbjct: 150 IVNSLDSTFSNCGSNDSV-FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIG 208
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
+ +IG E ++ E SR + + I+ ++L K G+ + F ++EKG
Sbjct: 209 SLVRIGWVELAWGVYQEI-SRS--GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
+ D Y +LI +++S +GL+E+
Sbjct: 266 VYPDIVTYNTLISAYSS-----------------------------------KGLMEEAF 290
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+++ +M ++NG K Y A +V+ +++ G P TY S++
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ + EKVF +M+ + +V +SSM++++ ++G + A+ +K G P+
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
IY L+ + R + L EM ++ D V+Y T++ + + K +NE
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
D I++ KL ++ ++L Q MK + +LD Y++ ++ G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 78/190 (41%), Gaps = 17/190 (8%)
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK-----------------GCEPNVWIY 472
F ++ S+M+ + ++GR+ DA + +M + C N ++
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+ L+ + +A+ LR+ + + + + T + +I + R ++ Y E
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
+G I+ IMV K ++E++ L ++ +G D Y++ ++A GL +
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288
Query: 593 AQWLQQNFEG 602
A L G
Sbjct: 289 AFELMNAMPG 298
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 148/304 (48%)
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
+FF+DM G Y +I +++ A LF+E + +G++ D ++ Y
Sbjct: 119 RFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGY 178
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ G ++ T+ E MK+ + ++N F K ++ + ++ G P
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNV 238
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
V+Y+++++A+C+ + +A K +++M++ G Y+S+V Y K G + DA L +
Sbjct: 239 VSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADE 298
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M G E NV Y +L+D + +++ E+L+ +M V P+ SYT +I + +A+
Sbjct: 299 MSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKN 358
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
D ++ +E + G D + G + L +IE ++ +M+ +G K + +Y +
Sbjct: 359 MDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTT 418
Query: 580 AMNA 583
M+A
Sbjct: 419 LMDA 422
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/485 (19%), Positives = 208/485 (42%), Gaps = 5/485 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P L L++ ++ + K V P +C+ L+ R K
Sbjct: 61 PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ I G + + +N + K + ++E+MK G++ D+ Y +++ Y K
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G + F E KS + + Y L + K G+ + L+FFR+MK+ G+ +
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVIT---YNTLINCFCKFGKLPKGLEFFREMKQSGLKPN 237
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y++L+ +F ++ A + + + G++ + LV Y + G + + +
Sbjct: 238 VVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLAD 297
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M ++ + A+++G A +++ ++++ G IP +Y ++I+ + +
Sbjct: 298 EMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAK 357
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+A ++ EM+ +G ++ Y + + +I A ++ +M+ KG + N +IY
Sbjct: 358 NMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYT 417
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+LMD + +++N + L +EM + V++ +I + + + ++ +
Sbjct: 418 TLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISND 477
Query: 534 GGV-IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
G+ + AI M+ K Q+E L + M +G D Y S ++ G +Q
Sbjct: 478 FGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQ 537
Query: 593 AQWLQ 597
A L+
Sbjct: 538 ALALR 542
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 161/394 (40%), Gaps = 9/394 (2%)
Query: 106 EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
E K P+ T +I + + D V E+ K + PD T + L+ +
Sbjct: 157 EEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKF 216
Query: 166 RKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
K + G + ++++++ + + K M + Y M+ G+V + Y
Sbjct: 217 GKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTY 276
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
+++AY KIG+ L E ++ ++ Y L D L R EA + F
Sbjct: 277 TSLVDAYCKIGNLSDAFRLADEMSQVGVE---WNVVTYTALIDGLCDVERIKEAEELFGK 333
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M G++ + + Y +LI F + A EL E + +G+ P++ L ++ GL
Sbjct: 334 MVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGI--KPDLLLYGTFIWSLCGL 391
Query: 345 --VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
+E V+ M+ +K + I +++ + K + + E+++ VT+
Sbjct: 392 EKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTF 451
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQK-GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+I+ C+ L SKA F + G Y++M+ K ++ A L +M
Sbjct: 452 CVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMA 511
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
KG P+ Y SL+D + N+ Q L +M
Sbjct: 512 QKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKM 545
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 185/423 (43%), Gaps = 39/423 (9%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTL-LQVFITDGEIALLAFNSAMGGYNKLHMYYSTI 206
VLP TC+ L++ ++ + + A L ++F + ++ FN + K
Sbjct: 182 VLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAK 241
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
M+++G+ + Y I+ Y G E A+ K +K++ F+ Y L
Sbjct: 242 DFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFT---YGSLI 298
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ K GR EA K F +M +KG+ IY +LI F + + +A E +KG
Sbjct: 299 SGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG-- 356
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+ T+ S+ +A F ++R A +
Sbjct: 357 ------------------ISPTMSTYNSLIHAL--------------FMEQRTDEAECMI 384
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
E + +G P +TY +IN YCR A KA + EM G Y+S++ + K
Sbjct: 385 KE-IQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSK 443
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
R+++A L K+ ++G P+V ++N+L+D H N++ +L K+M+R KV PD+V+
Sbjct: 444 KNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVT 503
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+ T++ + R + + + ++E + G D ++ +S+ I++ ++ +M
Sbjct: 504 FNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEML 563
Query: 567 SEG 569
G
Sbjct: 564 DTG 566
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 147/330 (44%), Gaps = 4/330 (1%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S+ ++ L S RA EA + F MKEKG+L SL+ F + + A L+
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E + ++ + +EG ++K D V M+ + +K + IV+G+
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
AA + + Q P TY S+I+ C+ +A K+F EM QKG V Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++++ + G + A +M KG P + YNSL+ + + E + KE++
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ ++PD ++Y +I+ Y R ++E +G + ++ V SK ++++E
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
L + + SEG D ++ NAL D
Sbjct: 450 ADDLFKKITSEGVLPDVIMF----NALIDG 475
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/476 (20%), Positives = 193/476 (40%), Gaps = 43/476 (9%)
Query: 110 LPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFK 169
LP S L L ++ W V +E F++ + +T + ++ + K K
Sbjct: 183 LPTIETCNSLLSLFLKLNRTEAAW---VLYAEMFRL-RIKSSVYTFNIMINVLCKEGKLK 238
Query: 170 IANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
A + T G + ++ +N+ + GY + + MK I DS Y ++
Sbjct: 239 KAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLI 298
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
K G E+ + +F E + L S +Y L D G A + +M +K
Sbjct: 299 SGMCKQGRLEEASKIFEEMVQKGLRP---SAVIYNTLIDGFCNKGNLDMASAYKDEMLKK 355
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI S Y SLI + AE + KE +EKG+ D + Y
Sbjct: 356 GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD-------AITY--------- 399
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
++NG+ + A +++++++ G P + TY S+++
Sbjct: 400 -------------------NILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHV 440
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+ +A+ +F ++ +G V+ +++++ + ++ A L+ M P+
Sbjct: 441 LSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPD 500
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+N++M H R + + +L+ EM+RR + PD +S+ T+IS Y+R + + N
Sbjct: 501 EVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRN 560
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
E G +V K + + +LL++M S+G D+ Y + + +
Sbjct: 561 EMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 132/315 (41%)
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
G + E +F +++ + ++ LI S + A E F +EKG+L
Sbjct: 127 GTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTI 186
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
E C L+ ++++ E + M ++K S ++N K A
Sbjct: 187 ETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGH 246
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ + G P VTY +I++ YC A+ + M+++ + Y S+++ K GR
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGR 306
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ +A + +M KG P+ IYN+L+D NL EM ++ ++P +Y +
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+I A + D E + G D I++ + + + ++ L +M + G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426
Query: 570 TKLDERLYHSAMNAL 584
K ++ Y S ++ L
Sbjct: 427 IKPTKKTYTSLLHVL 441
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 126/295 (42%), Gaps = 22/295 (7%)
Query: 170 IANTLLQVFITDGEIALLA----------FNSAMGGYNKL-HMYY------STILVYEKM 212
I NTL+ F G + + + + M YN L H + + +++
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387
Query: 213 KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKS 272
+ GI D+ Y ++ Y + +++K L E + + T Y L L K
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPT---KKTYTSLLHVLSKK 444
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
R EA F+ + +G+L D ++ +LI S + VK A EL K+ + + D EV
Sbjct: 445 NRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPD-EVT 503
Query: 333 LKLVLM-YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
++ + EG VE+ ++ + MK +K +++G+S+R A +V +++
Sbjct: 504 FNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEML 563
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
G P +TY +++ C+ AE++ EM KG Y +++ K
Sbjct: 564 DTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/342 (18%), Positives = 132/342 (38%), Gaps = 6/342 (1%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
Q PD+ + S + GM K + +E + + +K RP LI
Sbjct: 285 QKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQK--GLRPSAVIYNTLIDGFCNKGNL 342
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
D + ++ + P T + L+ + ++ A +++ G + +N
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY + L++++M ++GI Y ++ K ++ LF + S +
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
P M+ L D + A + +DM + D + +++ +V+
Sbjct: 463 --LP-DVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEE 519
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A ELF E + +G+ D L+ Y G ++ V M + + A+V
Sbjct: 520 ARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQ 579
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
G K + A ++ ++++S+G P TY ++I ++ +
Sbjct: 580 GLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNI 621
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/486 (20%), Positives = 202/486 (41%), Gaps = 37/486 (7%)
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
D+ +S ++ V + + L+ K K+ + + G E ++ FN+
Sbjct: 143 DAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTV 202
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ + + +L+ E+M S + D + +ME + + G E AAL L+ + ++
Sbjct: 203 IDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIE--AALRLKARMSEM 260
Query: 253 DSTPFSTHMYKIL---C------DSLG-------------------------KSGRAFEA 278
+P S + ++ C D+LG ++G A
Sbjct: 261 GCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHA 320
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
LK M ++G D Y+++I + E++ A+ + + + G L D L++
Sbjct: 321 LKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVA 380
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
E +E+ LD+ + L + ++N K AV+++E++ S GC P
Sbjct: 381 LCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPD 440
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+VTY +I+ C +KA + EM+ G + V Y++++ K RI +A +
Sbjct: 441 EVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFD 500
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M G N +N+L+D A+ + +L +M + P+ V+Y ++++ Y +
Sbjct: 501 QMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQG 560
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
NG +D ++ K + + +KLL+ M+ +G K + Y+
Sbjct: 561 NISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYN 620
Query: 579 SAMNAL 584
+ +L
Sbjct: 621 PVIQSL 626
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 187/475 (39%), Gaps = 68/475 (14%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+++T L+ V+ ++ + L P + T + L+ + + A
Sbjct: 229 PDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGY 288
Query: 175 LQVFITDG-EIALLAFNSAMGGY-NKLHMYYSTILVYEKMKSAGIVLDSGC------YCQ 226
+Q I DG E + F++ + G H+ ++ +K G++L GC Y
Sbjct: 289 IQQEIADGFEPDRVTFSTFVNGLCQNGHVDHA-------LKVLGLMLQEGCEPDVYTYST 341
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPF-STHMYKILCDSLGKSGRAFEALKFFRDM 285
++ G+ E+ + ++ +DS T + L +L + EAL R++
Sbjct: 342 VINCLCNNGELEEAKGIV----NQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAREL 397
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
KG+ + + LI + + + LA LF+E + G D L+ G +
Sbjct: 398 TVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKL 457
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY------------------ 387
K LD+++ M+ + S I++G KRR A +V+
Sbjct: 458 AKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTL 517
Query: 388 -----------------EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+Q+IS+G P VTY SI+ YC+ SKA + M GF
Sbjct: 518 IDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGF 577
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+ VV Y++++ K R + A+ L+ M+ KG +P YN ++ R N R
Sbjct: 578 EVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALS 637
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRA-----REFDMCVKF--------YNEFRM 532
L++EM PD +Y V R FD V+ ++ FRM
Sbjct: 638 LFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRM 692
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/427 (18%), Positives = 175/427 (40%), Gaps = 13/427 (3%)
Query: 183 EIALLAFNSAMGGYNKLHMYYSTI-LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
E+ L S +G Y +L ++ LV ++ G+ ++ Y ++ + + +
Sbjct: 122 EVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLE 181
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
+ + E S+ ++ + + + D+L ++ +A A+ +M + D + + +L+
Sbjct: 182 SAYTEMSSQGIEPDVVT---FNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLM 238
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
F ++ A L E G L+ Y + G V L ++ +
Sbjct: 239 EGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFE 298
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
VNG + A+KV ++ +GC P TY+++IN C +A+ +
Sbjct: 299 PDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGI 358
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
+M G +++++ ++ +A+ L ++ KG PNV+ +N L++ +
Sbjct: 359 VNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCK 418
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ +L++EM+ TPD+V+Y +I + + + E ++G
Sbjct: 419 VGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVT 478
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL---------QMQ 592
++ K +IEE ++ M G + +++ ++ L +A QM
Sbjct: 479 YNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMI 538
Query: 593 AQWLQQN 599
++ LQ N
Sbjct: 539 SEGLQPN 545
>gi|357123699|ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 492
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 175/397 (44%), Gaps = 12/397 (3%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
RP + LIR L ++ + +L + + + PDA + L+ + +A+
Sbjct: 84 MRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLEGLLARAHLCLAD 143
Query: 173 TLLQVFITDGEIALLAFNSA-----MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
LL DG +A N + Y + + V +MK GI LD+ Y +
Sbjct: 144 RLLLQMADDG----VARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGIQLDTAGYSTL 199
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
+ Y G +K L +E + ++ +Y L D+ GK G+ +A + F M+
Sbjct: 200 VRLYRDNGMWKKATDLIMEMQELGVE---LDVKIYNGLIDTFGKYGQLADARRLFEKMRA 256
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
+GI D + + +LI + +K A F +E+GM DP++ + ++ E+G ++
Sbjct: 257 EGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIISRLGEQGKWDE 316
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+ + M+N LK S + +V+ + + + A + L ++ + + N
Sbjct: 317 LKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALKAEELHLSPSIFCVLAN 376
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
AY + L + V M+ +G + +V + ++ + GR +A+ + +K G P
Sbjct: 377 AYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAVAVFQHIKDSGMSP 436
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+V Y +LM R K +V +++ EMER TPD+
Sbjct: 437 DVVTYTTLMKGFMRVKKFEKVSEVYNEMERAGCTPDR 473
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 150/332 (45%), Gaps = 35/332 (10%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S Y L +L ++GR EA +M+ G+ D + Y +L+ + + LA+ L
Sbjct: 87 SAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLEGLLARAHLCLADRLL 146
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+ + G+ R+ + L+ Y G +E + V+ MK R
Sbjct: 147 LQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMK--------------------R 186
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
RG QL + G Y++++ Y ++ KA + +EMQ+ G + V Y
Sbjct: 187 RGI--------QLDTAG-------YSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIY 231
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+ ++ +GK G++ DA L KM+A+G +P++ +N+L+ H R N+++ + + M+
Sbjct: 232 NGLIDTFGKYGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQE 291
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ PD + ++IS ++D K +++ R G A+ ++V ++ + + +
Sbjct: 292 EGMYPDPKIFMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRD 351
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ + +K+E L ++ NA GL
Sbjct: 352 AHECVAALKAEELHLSPSIFCVLANAYAQQGL 383
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 170/405 (41%), Gaps = 73/405 (18%)
Query: 205 TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKI 264
++ V M++AG+ + Y +++ A + G + + AL LE R L P + H Y
Sbjct: 72 SLHVLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEM--RHLGLRPDAAH-YNA 128
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L + L A + M + G+ + Y L+ ++A ++ + + E + +G
Sbjct: 129 LLEGLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRG 188
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ D LV +Y + G+ +K D++ M+ +++ I +++ F K A
Sbjct: 189 IQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADAR 248
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG--------------- 429
+++E++ ++G P T+ ++I +CR+ +A + F MQ++G
Sbjct: 249 RLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIISRL 308
Query: 430 ------------FDK--------CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK------ 463
FDK Y+ +V +YG+ GR RDA VA +KA+
Sbjct: 309 GEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALKAEELHLSP 368
Query: 464 -----------------------------GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
G EPN+ + N L++ A + +++
Sbjct: 369 SIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAVAVFQH 428
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
++ ++PD V+YTT++ + R ++F+ + YNE G DR
Sbjct: 429 IKDSGMSPDVVTYTTLMKGFMRVKKFEKVSEVYNEMERAGCTPDR 473
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/259 (18%), Positives = 101/259 (38%), Gaps = 35/259 (13%)
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+L V+ M+ A ++ S ++ ++ A + ++ G P Y +++
Sbjct: 72 SLHVLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLE 131
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK---- 463
A A+++ ++M G + Y ++ Y + GR+ D+ W++ +MK +
Sbjct: 132 GLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGIQL 191
Query: 464 -------------------------------GCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
G E +V IYN L+D G+ L +L+
Sbjct: 192 DTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARRLF 251
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
++M + PD ++ +I + R ++F+ + G D I ++ +
Sbjct: 252 EKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIISRLGEQ 311
Query: 553 SQIEELVKLLQDMKSEGTK 571
+ +EL KL M++ G K
Sbjct: 312 GKWDELKKLFDKMRNRGLK 330
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 75/162 (46%)
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
V +M+ G AY+ ++ + GR +A L+ +M+ G P+ YN+L++
Sbjct: 75 VLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLEGLL 134
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+L ++L +M V ++ +Y ++ AY RA + E + G +D A
Sbjct: 135 ARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGIQLDTA 194
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+V ++ ++ L+ +M+ G +LD ++Y+ ++
Sbjct: 195 GYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLID 236
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 60/138 (43%)
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
++A M+A G P+ Y L+ RA + E L EM + PD Y ++
Sbjct: 75 VLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLEGLL 134
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+ + + +G +R +++ +++ ++E+ +L +MK G +LD
Sbjct: 135 ARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGIQLDTA 194
Query: 576 LYHSAMNALRDAGLQMQA 593
Y + + RD G+ +A
Sbjct: 195 GYSTLVRLYRDNGMWKKA 212
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 199/430 (46%), Gaps = 12/430 (2%)
Query: 160 ASCVRARKFKIANTLLQVFITDGEIALLAFNSA--MGGYNKLHMYYSTILVYEKMKSAGI 217
+S +R R+ + A +L++ ++ G IA+ + ++ + K+ + ++++M
Sbjct: 133 SSYLRLRRARDAADVLRLSLSSG-IAMKQYTASQILFALIKIRQFALARDLFDEMVQCKF 191
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
LD Y + AY +I + + L +E K K + P++ MY L ++ R
Sbjct: 192 PLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMY-----GLCRNNRV 246
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
EA++ M E+GI+ D Y +L+ F E+++A E+ + + C +
Sbjct: 247 LEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFM 306
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISC-AIVNGFSKRRGYWAAVKVYEQLISQG 394
V + G ++K + + + + + +C A+++ K R + A +++ + ++G
Sbjct: 307 VDGLRKRGHIDKAFRLACHLGELGM-VPNLFACNALIDKLCKDRRFREAERLFRGMANRG 365
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
P +VTYA +I++ C+ + A +F M++KG V Y+S++ Y + A
Sbjct: 366 LEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQAR 425
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L+ +M KG P+ Y+ L+ R +L +L +EM R V+ + ++TT+IS +
Sbjct: 426 GLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGF 485
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ D + +++ + V + +M+ + ++ + + +L M G D
Sbjct: 486 CKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDN 545
Query: 575 RLYHSAMNAL 584
Y S ++ L
Sbjct: 546 YTYRSLISVL 555
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 177/390 (45%), Gaps = 9/390 (2%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ +N M G + + + V M GIV D Y ++ + + + E AL +
Sbjct: 231 VPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELE--MALEMT 288
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA--SLICSF 304
L P S + D L K G +A + + E G++ P+++A +LI
Sbjct: 289 DDMLSLHFVP-SVASCSFMVDGLRKRGHIDKAFRLACHLGELGMV--PNLFACNALIDKL 345
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ AE LF+ +G+ + L+ + G+++ L + + M+ ++++
Sbjct: 346 CKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTV 405
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++NG+ + + A + +++ +G P +Y+ +I CR + A ++ E
Sbjct: 406 YPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHRE 465
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M + G V ++++++ + K G + +A L KM PN +N +++ + R N
Sbjct: 466 MARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGN 525
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR-AIAG 543
+R+ +L+ +M R +TPD +Y ++IS +F ++ N V++ ++
Sbjct: 526 VRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTT 585
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+M G F K ++ E + +M++ G KLD
Sbjct: 586 LMYG-FCKEGRLTETYHIWDEMRARGVKLD 614
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 149/363 (41%), Gaps = 21/363 (5%)
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
LF +R L+ + Y IL SL K G +AL F M+EKGI Y SLI
Sbjct: 357 LFRGMANRGLEPNEVT---YAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLIN 413
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ A L E EKG+ L+ +G + +++ M +
Sbjct: 414 GYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSG 473
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
+ +++GF K A ++++++I +P +VT+ +I YCR+ KA +++
Sbjct: 474 NVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLY 533
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK----GCEPNVWIYNSL--- 475
+M +G Y S++++ T + MKAK E N + NS
Sbjct: 534 DQMVDRGLTPDNYTYRSLISVLCLT---------LGAMKAKEFVDDLENNCVVLNSFSLT 584
Query: 476 MDMHGRAKNLRQVE--KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
M+G K R E +W EM R V D +S+T ++ A + + + + E +
Sbjct: 585 TLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEK 644
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G D M+ V SK I + + M ++G + Y +N L +G A
Sbjct: 645 GVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSA 704
Query: 594 QWL 596
Q L
Sbjct: 705 QIL 707
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 143/340 (42%), Gaps = 2/340 (0%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
A L C +L P + L D L K R EA + FR M +G+ + YA LI
Sbjct: 319 AFRLACHLGELGMVP-NLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILI 377
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
S + A +F EKG+ L+ Y + + ++ M L
Sbjct: 378 HSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLA 437
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
S ++ G ++ +A++++ ++ G T+ ++I+ +C+ +A ++
Sbjct: 438 PSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARL 497
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F +M V ++ M+ Y + G +R A L +M +G P+ + Y SL+ +
Sbjct: 498 FDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCL 557
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ ++ ++E V + S TT++ + + ++E R G +D
Sbjct: 558 TLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLIS 617
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
++V KL E++ L ++MK +G K D ++H+ M
Sbjct: 618 FTVIVYAALKLHDGEKISVLFREMKEKGVKPDN-VFHTCM 656
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/560 (17%), Positives = 214/560 (38%), Gaps = 42/560 (7%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+E+ + V D + + ++G + + E+A + ++ L F P ++ ++
Sbjct: 250 VEVKNSMVERGIVADEVTYRTLVYGFCRTEEL-EMALEMTDDMLSL-HFVPSVASCSFMV 307
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-- 182
L + D L+ ++P+ C+ L+ + R+F+ A L + G
Sbjct: 308 DGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLE 367
Query: 183 ----------------------------------EIALLAFNSAMGGYNKLHMYYSTILV 208
+ + +NS + GY + ++ +
Sbjct: 368 PNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGL 427
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+M G+ + Y ++ + GD L E + ++ + L
Sbjct: 428 LNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYT---FTTLISG 484
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
K G EA + F M + ++ + + +I + + V+ A +L+ + ++G+ D
Sbjct: 485 FCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPD 544
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ + K + V+ ++N + ++ ++ GF K +++
Sbjct: 545 NYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWD 604
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ ++G +++ I+ A ++ K +F EM++KG V ++ M+ ++ K
Sbjct: 605 EMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEE 664
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
I A+ KM A GC PNV Y L++ ++ L + L +EM + P+ +Y
Sbjct: 665 NIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYN 724
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+ E + K + + G + + ++ F K QI+ + L+Q+
Sbjct: 725 CFLDFLANEGELEK-AKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTES 783
Query: 569 GTKLDERLYHSAMNALRDAG 588
G D Y + +N L G
Sbjct: 784 GFFPDCISYSTIINELCKVG 803
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 161/387 (41%), Gaps = 7/387 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILV 208
P A + S L+A R A L + +G + F + + G+ K +
Sbjct: 438 PSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARL 497
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH-MYKILCD 267
++KM + +V + + ++E Y ++G+ K L+ + R L ++ + +LC
Sbjct: 498 FDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCL 557
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+LG A +A +F D++ ++ + +L+ F + ++ E +G+
Sbjct: 558 TLG----AMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKL 613
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D +V ++ EK + MK +K + +++ SK A+ +
Sbjct: 614 DLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCW 673
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++I+ GC P VTY +IN C+ S A+ + EM F Y+ +
Sbjct: 674 DKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANE 733
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G + A L A + +GC N +N+L+ +A ++ L + PD +SY
Sbjct: 734 GELEKAKVLHATI-LEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISY 792
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNG 534
+T+I+ + + + + +NE G
Sbjct: 793 STIINELCKVGDINKAFQLWNEMLYKG 819
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 171/432 (39%), Gaps = 69/432 (15%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+EL+R+ + F + + G KD +EA +L + + S + +
Sbjct: 460 MELHREMARNGVSGNVYTFTTLISGFCKDGNM--------DEAARLFDKMIDSSVVPNEV 511
Query: 125 RYLVQSKKWDSIVSLSEDFKIYN------VLPDAHTCSRLVAS-CVRARKFKIANTLLQV 177
+ V + + + ++ + F++Y+ + PD +T L++ C+ K +
Sbjct: 512 TFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKA-----KE 566
Query: 178 FITDGEIALLAFNS-----AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
F+ D E + NS M G+ K T ++++M++ G+ LD + I+ A
Sbjct: 567 FVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAAL 626
Query: 233 KIGDSEKVAALFLECKSRKL-DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K+ D EK++ LF E K + + F T M D K +AL + M G
Sbjct: 627 KLHDGEKISVLFREMKEKGVKPDNVFHTCMI----DVHSKEENIVQALNCWDKMIADG-- 680
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
CS +T L L K G L ++ EE LV + L
Sbjct: 681 ----------CSPNVVTYTVLINHLCKS----GYLSSAQI-------LCEEMLVGRFL-- 717
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
S +C + F G KV I +GC+ VT+ ++I +C+
Sbjct: 718 ---------PNSFTYNCFL--DFLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCK 766
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
A + + GF ++YS+++ K G I A L +M KG +P++
Sbjct: 767 AGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVA 826
Query: 472 YNSLM---DMHG 480
YN L+ ++HG
Sbjct: 827 YNILIRWCNIHG 838
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
I+ K R + A ++++++ + Y + I AYC I A + M+ KG
Sbjct: 166 ILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKG 225
Query: 430 FDKCVVAYSSMVAMYG--KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
V Y+ V MYG + R+ +A+ + M +G + Y +L+ R + L
Sbjct: 226 VKGSAVPYN--VLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEM 283
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
++ +M P S + ++ + D + G V + ++
Sbjct: 284 ALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALID 343
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
K + E +L + M + G + +E Y +++L G+ A
Sbjct: 344 KLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDA 389
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 169/359 (47%), Gaps = 3/359 (0%)
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
E+ + FL+ + ++ P S + L L K GR + KFF+DM GI Y
Sbjct: 3 EEASECFLKMRKFRVFPKPRSCN---ALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTY 59
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
+I ++++A LF + +E G D L+ + + GL+++ + + E MK+
Sbjct: 60 NIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD 119
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
A A++N F K A + ++ + G P VTY++ I+A+C+ + +
Sbjct: 120 ADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQE 179
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A K F++M++ Y+S++ K G + +A+ LV ++ G + NV Y +L+D
Sbjct: 180 AIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 239
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+++ E++++ M V P++ +YT ++ + +A+E + E +
Sbjct: 240 GLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKP 299
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
D + G ++ S++EE L+ ++K G + +Y + M+A +G +A L
Sbjct: 300 DLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTL 358
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 179/411 (43%), Gaps = 34/411 (8%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ +NS + G+ KL + I ++E+MK A D Y ++ + K K
Sbjct: 91 IVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLH 150
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---C 302
E K+ L + Y D+ K G EA+KFF DM+ + + Y SLI C
Sbjct: 151 EMKANGLKPNVVT---YSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANC 207
Query: 303 SFASITE-VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
++ E +KL EE+ + G+ + L+ EEG +++ +V +M NA +
Sbjct: 208 KAGNLAEALKLVEEIL----QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVA 263
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ A+V+GF K + A + +++ + P + Y +I+ C + +A+ +
Sbjct: 264 PNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLL 323
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL------------------VAK---- 459
E+++ G + V Y++++ Y K+G+ +A+ L VAK
Sbjct: 324 IGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFD 383
Query: 460 -MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
M KG P+ Y +L+D + + NL++ L M + D +YT +I + +
Sbjct: 384 EMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSG 443
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ +E G + D + ++ + L +++E ++L +M G
Sbjct: 444 QVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 494
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 188/461 (40%), Gaps = 46/461 (9%)
Query: 119 TLKLLIRYLVQSKKWDSIVSL---------SEDFKIYNVLPDAHTCSRLVASCVRARKFK 169
T ++I YL + + SL + D YN L D H L+ C+
Sbjct: 58 TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECI------ 111
Query: 170 IANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
Q+ D + ++ +N+ + + K +MK+ G+ + Y ++
Sbjct: 112 --CIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFID 169
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
A+ K G ++ F++ + L F+ Y L D+ K+G EALK ++ + G
Sbjct: 170 AFCKEGMLQEAIKFFVDMRRVALTPNEFT---YTSLIDANCKAGNLAEALKLVEEILQAG 226
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
I + Y +L+ +K AEE+F+ G+ + E LV +I+ +E
Sbjct: 227 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAK 286
Query: 350 DVVESMKNAKLKISDCISCAIVNGFS---------------KRRGYWAAVKVYEQLISQG 394
D+++ MK +K + I+ G K G +Y L+
Sbjct: 287 DILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAY 346
Query: 395 CIPGQVTYA--------SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
GQ T A +++ C+ + A+K+F EM KG +AY++++ K
Sbjct: 347 FKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMK 406
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G +++A+ L +M G E ++ Y +L+ + +++ L EM + V PD+V
Sbjct: 407 HGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVV 466
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNG---GVIDRAIAGI 544
Y +I Y + D ++ NE G G+ D A+ +
Sbjct: 467 YMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHAVPSV 507
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 134/310 (43%), Gaps = 4/310 (1%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S Y I+ D L K G A F MKE G D Y SLI + + +F
Sbjct: 55 SVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIF 114
Query: 318 KEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
++ ++ DP+V L+ + + + K + + MK LK + ++ F
Sbjct: 115 EQMKDADC--DPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFC 172
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A+K + + P + TY S+I+A C+ ++A K+ E+ Q G VV
Sbjct: 173 KEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVV 232
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y++++ + GR+++A + M G PN Y +L+ +AK + + + KEM
Sbjct: 233 TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 292
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + + PD + Y T++ + E + +G + I ++ + K Q
Sbjct: 293 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 352
Query: 556 EELVKLLQDM 565
E + LL++M
Sbjct: 353 TEALTLLEEM 362
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 172/417 (41%), Gaps = 26/417 (6%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
++ M +AGI Y +++ K GD E +LF + K TP Y L D
Sbjct: 44 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGF--TP-DIVTYNSLIDG 100
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
GK G E + F MK+ D Y +LI F + A E E + G+ +
Sbjct: 101 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPN 160
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
+ + +EG++++ + M+ L ++ ++++ K A+K+ E
Sbjct: 161 VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE 220
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+++ G VTY ++++ C +AE+VF M G Y+++V + K
Sbjct: 221 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 280
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ A ++ +MK K +P++ +Y +++ L + + L E++ + + V YT
Sbjct: 281 EMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYT 340
Query: 509 TVISAYNRARE-----------------------FDMCVKFYNEFRMNGGVIDRAIAGIM 545
T++ AY ++ + F++ K ++E G + D+ +
Sbjct: 341 TLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTAL 400
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+ K ++E + L M G +LD Y + + L +G +A+ L G
Sbjct: 401 IDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIG 457
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 177/363 (48%), Gaps = 16/363 (4%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
FN + Y KL L + +M+ G+ + C+ ++EA+ + G+ + +++ E
Sbjct: 110 FNLMIAAYGKLGQPGIAELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEM- 168
Query: 249 SRKLDSTPFSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILE-DPSIYASLICSFAS 306
L + P T + Y++ ++L K+ R +A + F+ + E + D +Y ++ ++
Sbjct: 169 ---LKTGPAPTEVTYQVYINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGK 225
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
+ + LF++ + G+ P + + + V + M+ AK+K
Sbjct: 226 AGKFSEQQALFRQMKGAGV---PMTVVTFNSLMAFQKTVADAEACLRHMQAAKIKPDVIT 282
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
++N +SK R A V+ ++++ G P ++ Y ++++AY + AE +F M
Sbjct: 283 YTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMG 342
Query: 427 QKGFDKC---VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
Q D+C + +Y++++A Y TG ++ A L+ +MK G EPNV Y +LM +
Sbjct: 343 Q---DRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVH 399
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID-RAIA 542
++ + + ++++++ + P+ +T ++ + + +F+ + ++ + +G D R+ A
Sbjct: 400 DINAMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQEDFESALSWFKKMLDSGCPADQRSRA 459
Query: 543 GIM 545
+M
Sbjct: 460 ALM 462
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 115/248 (46%), Gaps = 14/248 (5%)
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
M+ L+ + +++ ++ + A +Y++++ G P +VTY INA C+
Sbjct: 133 MREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYINALCKAER 192
Query: 415 YSKAEKVFIEMQQKGFDKCVVA------YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
++ AE++F K D+ A Y+ M+ YGK G+ + L +MK G
Sbjct: 193 FNDAERIF-----KCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVPMT 247
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
V +NSLM K + E + M+ K+ PD ++YT +I+AY++AR + +
Sbjct: 248 VVTFNSLMAFQ---KTVADAEACLRHMQAAKIKPDVITYTGLINAYSKARRVEEAHVVFR 304
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E +G R ++ ++K ++E L + M + + D R Y + + A + G
Sbjct: 305 EMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTG 364
Query: 589 LQMQAQWL 596
+A+ L
Sbjct: 365 NMKKAERL 372
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 5/189 (2%)
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEM----QQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G+V+ ++ R+ +K V + QQ ++ + ++ M+A YGK G+ A
Sbjct: 67 GKVSKGDVLGTLIRLRQLNKWTMVLEVLLWLKQQDWWNFGIHDFNLMIAAYGKLGQPGIA 126
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+M+ G EPNV + SL++ H R N + E +++EM + P +V+Y I+A
Sbjct: 127 ELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYINA 186
Query: 514 YNRAREFDMCVKFYNEFRMNG-GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+A F+ + + + D + +M+ + K + E L + MK G +
Sbjct: 187 LCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVPM 246
Query: 573 DERLYHSAM 581
++S M
Sbjct: 247 TVVTFNSLM 255
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/223 (17%), Positives = 88/223 (39%), Gaps = 38/223 (17%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ + + Y+K +V+ +M ++G+ Y +++AY K + E +LF
Sbjct: 280 VITYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLF- 338
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
KS D Y L + +G +A + + MK+ G+ + Y +L+ +
Sbjct: 339 --KSMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYT 396
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
S+ ++ L E ++ A +K +
Sbjct: 397 SVHDIN-----------------------------------AMLQTFEDLQKAGIKPNST 421
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
I +V F ++ + +A+ +++++ GC Q + A++++A
Sbjct: 422 IFTLLVRTFGQQEDFESALSWFKKMLDSGCPADQRSRAALMDA 464
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 6/172 (3%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
RP + L+ + K+ + SL + PD + + L+A+ K A
Sbjct: 311 LRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAE 370
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
LL+ G E ++ + + M GY +H + + +E ++ AGI +S + ++ +
Sbjct: 371 RLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTF 430
Query: 232 YKIGDSEKVAALFLECKSRKLDST-PFSTHMYKILCDSLGKSGRAFEALKFF 282
+ D E + F + LDS P L D+ S + E L++F
Sbjct: 431 GQQEDFESALSWF----KKMLDSGCPADQRSRAALMDACQTSEQKQEVLEYF 478
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 197/450 (43%), Gaps = 8/450 (1%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
++ LV+ K + + +SL + ++ + PD T + L+ + + T+L + G
Sbjct: 16 IVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLG 75
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ + N+ M G ++ ++K+ + G +D Y ++ KIG++
Sbjct: 76 YQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSAL 135
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
L + R ST + MY + D L K EA + +M +GI + Y++LI
Sbjct: 136 KLLRMIEDR---STRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLI 192
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAK 359
F ++ A L E K + +P V +LM +EG V++ +++ M
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNI--NPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEG 250
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+K + +++G+ A +++ ++ +G P +Y +I+ C+ +A
Sbjct: 251 VKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAM 310
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
+ E+ K V YSS++ + K GRI A+ L+ +M +G +V Y SL+D
Sbjct: 311 NLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDAL 370
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+ +NL + L+ +M+ R + P+K +YT +I + K + + G I+
Sbjct: 371 CKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINV 430
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+M+ K ++E + + M+ G
Sbjct: 431 WTYNVMISGLCKEGMLDEALAMKSKMEENG 460
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 185/425 (43%), Gaps = 23/425 (5%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD-------SGCYCQIMEAYYKIGDSE 238
++ FN +G K+ Y + I ++++M+ GI D C+C + + +
Sbjct: 10 IMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLG 69
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
K+ L + + L++ + K LC G ++L F + +G D YA
Sbjct: 70 KILKLGYQPNTITLNT------LMKGLC----LKGEVKKSLHFHDKVVAQGFQMDQVSYA 119
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMK 356
+L+ I E + A +L + E++ P V + ++ ++ LV + D+ M
Sbjct: 120 TLLNGLCKIGETRSALKLLRMIEDRS--TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM- 176
Query: 357 NAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+A+ + I+ ++ GF A + ++I + P TY +++A C+
Sbjct: 177 DARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKV 236
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+A+ + M ++G VV+Y++++ Y G +++A + M KG PNV+ YN +
Sbjct: 237 KEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIM 296
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+D ++K + + L +E+ + + P+ V+Y+++I + + + E G
Sbjct: 297 IDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQ 356
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
D ++ K +++ L MK G + ++ Y + ++ L G AQ
Sbjct: 357 PADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQK 416
Query: 596 LQQNF 600
L Q+
Sbjct: 417 LFQHL 421
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 174/433 (40%), Gaps = 48/433 (11%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
++L R ++ P+ +++ + G+ KD E AYD Y+E F P T LI
Sbjct: 135 LKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNE-AYDLYSEMDARGIF-PNVITYSTLI 192
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
+ + L + + N+ P+ +T + L+ + + K K A LL V
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAV------- 245
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
M G+ + Y +M+ Y IG+ + +F
Sbjct: 246 ---------------------------MTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMF 278
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ ++ +S Y I+ D L KS R EA+ R++ K ++ + Y+SLI F
Sbjct: 279 HTMVQKGVNPNVYS---YNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGF 335
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ + A +L KE +G D L+ + ++K + MK ++ +
Sbjct: 336 CKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNK 395
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
A+++G K + A K+++ L+ +GC TY +I+ C+ + +A + +
Sbjct: 396 YTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSK 455
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG-RAK 483
M++ G V + ++ + + A L+ +M AK D HG R+
Sbjct: 456 MEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL-------RFRDFHGERSP 508
Query: 484 NLR-QVEKLWKEM 495
N + EKL EM
Sbjct: 509 NENDKAEKLLHEM 521
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/529 (20%), Positives = 210/529 (39%), Gaps = 44/529 (8%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
++L R+ + V + L +L + +L YNE +P+ TL LI
Sbjct: 144 VDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRG-IQPDVVTLNTLI 202
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
+ L ++ + + V + E+ + V PD T + TL+Q FI +G I
Sbjct: 203 KALCRAHQVRTAVLMLEEMSSHAVAPDETTFT----------------TLMQGFIEEGSI 246
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+ + V KM G ++ Y K+G E
Sbjct: 247 E------------------AALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYI 288
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ D Y L ++G ALK M ++G D Y ++I
Sbjct: 289 ---QKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCL 345
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ E+ A+ + + ++G L D L++ + +E+ LD+ + L
Sbjct: 346 SKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDV 405
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
++N K ++++E++ S GC P +VTY +I+ C + A + E
Sbjct: 406 YTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKE 465
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M+ G + V Y++++ K RI +A + +M A G + +N+L+D +AK
Sbjct: 466 MESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKR 525
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+ +L ++M + + P ++Y ++++ Y + + NG ID G
Sbjct: 526 IDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGT 585
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM------NALRDA 587
++ K + + +KLL+ M+ +G + + Y+ + N LRDA
Sbjct: 586 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDA 634
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 137/317 (43%), Gaps = 21/317 (6%)
Query: 249 SRKLDSTPFSTHMY--KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+R+L S +Y IL ++L K G ++ F +MK G D Y LI S
Sbjct: 393 ARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCS 452
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
+ ++ A +L KE E G R ++ ++ +E+ +V + M + S
Sbjct: 453 MGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVT 512
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
+++G K + A ++ EQ++ +G P +TY SI+ YC+ KA + M
Sbjct: 513 FNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMT 572
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
GF+ VV Y +++ K GR + A+ L+ M+ KG P YN ++ R NLR
Sbjct: 573 ANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLR 632
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRA-----REFDMCVKFYNE--------FRM- 532
L++EM PD ++Y V R FD V+ N+ FRM
Sbjct: 633 DALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRML 692
Query: 533 -----NGGVIDRAIAGI 544
N G+ D I+ I
Sbjct: 693 AEGLLNLGMDDYLISAI 709
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 139/313 (44%)
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G+ D ++Y L+ A + +KL E ++ E ++G+ D L+ V
Sbjct: 155 GVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTA 214
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+ ++E M + + + ++ GF + AA++V +++ GC P +VT +IN
Sbjct: 215 VLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLING 274
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
YC++ A + GF+ V Y++ V + G + A+ ++ M +G +P+
Sbjct: 275 YCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPD 334
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
V+ YN++++ + L + + + +M R PD ++ T+I A + +
Sbjct: 335 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAR 394
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E + G D I++ K+ ++L ++MKS G DE Y+ ++ L G
Sbjct: 395 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMG 454
Query: 589 LQMQAQWLQQNFE 601
+ A L + E
Sbjct: 455 KLVNALDLLKEME 467
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 1/174 (0%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + Y II + E + EM+++G + S V Y + R DA+ L
Sbjct: 87 PSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDL 146
Query: 457 V-AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
V ++ G + + +YN L+++ ++ +E ++ EM R + PD V+ T+I A
Sbjct: 147 VRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALC 206
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
RA + V E + D ++ F + IE +++ M G
Sbjct: 207 RAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETG 260
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 194/453 (42%), Gaps = 10/453 (2%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALL----AFNSAMGGYNKLHMYYST 205
P+A + + ++A RA + A ++VF E A+L +N+ + G+ K +
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDA---VEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 254
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ ++M G+ ++ Y ++ + G + +AL E S+K+ F+ Y IL
Sbjct: 255 FRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFT---YSIL 311
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
D L ++G + L F + G+ + L+ +V +AEE+ + G+
Sbjct: 312 FDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGL 371
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ + L+ Y + G +E MK+ +K A++NG K A
Sbjct: 372 VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 431
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+ ++ G P T+ ++I+AY R K V EMQ+ G VV+Y S+V +
Sbjct: 432 LLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 491
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K G+I +A+ ++ M K PN +YN+++D + Q L ++M+ ++P V
Sbjct: 492 KNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIV 551
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y +I + + N + + D ++ I++ + L Q M
Sbjct: 552 TYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 611
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
G K R YH ++ L AG + ++L Q
Sbjct: 612 HKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQ 644
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/470 (19%), Positives = 181/470 (38%), Gaps = 33/470 (7%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + ++I + ++ + V + ++ VLP+ T + ++ ++ + L
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ G + + +N + G + T + ++M S +V D Y + + +
Sbjct: 258 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 317
Query: 234 IGDSEKVAALFLE--------------------CKSRKL-----------DSTPFSTH-M 261
GDS+ + +LF + CK K+ ++ T +
Sbjct: 318 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 377
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L + ++G A F MK + I D Y +LI + A++L E +
Sbjct: 378 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 437
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ G+ E L+ Y G +EK V+ M+ LK + +IVN F K
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 497
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
AV + + + + +P Y +II+AY +A + +M+ G +V Y+ ++
Sbjct: 498 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 557
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+I +A ++ + P+ YN+L+ N+ + L + M + +
Sbjct: 558 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 617
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+Y +IS A + Y + N V AI IMV +SK
Sbjct: 618 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 667
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/506 (20%), Positives = 199/506 (39%), Gaps = 7/506 (1%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
EL D PD F+ LH + K + QE KK T + I+
Sbjct: 202 ELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKK--GMCSNLFTFNIFIQ 259
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EI 184
L + +S+ + + PD T + L+ + A L + G E
Sbjct: 260 GLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEP 319
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+N+ + GY K+ M + + + G V D YC ++ + + ++ ALF
Sbjct: 320 DGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALF 379
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ L T +Y +L L + G +AL+ +M E G D Y +I
Sbjct: 380 NAALGKGLKPTVI---LYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGL 436
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ V A L +A KG + D L+ Y ++ +E T+ ++ M + +
Sbjct: 437 CKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDV 496
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++NG SK ++ +E ++ +GC+P ++TY + + C+ ++A + E
Sbjct: 497 ITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDE 556
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK-GCEPNVWIYNSLMDMHGRAK 483
+ KG V+++++++ + G ++ A L +M + YN +++
Sbjct: 557 ILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKL 616
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+L EKL+ EM PD +Y +I + D KF E G + G
Sbjct: 617 DLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFG 676
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEG 569
++ ++ E V ++ M G
Sbjct: 677 RVINCLCVQHRVHEAVDIIHFMVHNG 702
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/488 (18%), Positives = 210/488 (43%), Gaps = 11/488 (2%)
Query: 102 DYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS 161
D+YN P + ++ LV+S + + K ++PD +T + + S
Sbjct: 103 DFYN-------CEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKS 155
Query: 162 CVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD 220
R ++ A LL ++ G ++ +A+ + + G+ + + ++ M GI D
Sbjct: 156 FCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPD 215
Query: 221 SGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALK 280
+ +++ K G+ ++ L + + + S F+ + I L + G A+
Sbjct: 216 VSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFT---FNIFIQGLCRKGMLSGAMS 272
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
+ +G+ D Y +LIC + V AE+ + G+ D L+ Y
Sbjct: 273 MLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYC 332
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ G+++ +++ + C+++NG + A+ ++ + +G P +
Sbjct: 333 KMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVI 392
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
Y +I C+ L +A ++ EM + G + Y+ ++ K G + DA L+
Sbjct: 393 LYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDA 452
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
AKG P+V+ +N+L+D + + + ++ +M VTPD ++Y +V++ ++A +
Sbjct: 453 IAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKN 512
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ ++ + G V ++ I+ K ++ E + L+ ++ ++G D + +
Sbjct: 513 EDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATI 572
Query: 581 MNALRDAG 588
++ + G
Sbjct: 573 ISGFANNG 580
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 154/394 (39%), Gaps = 40/394 (10%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VPD + S ++G+ ++ + A +N A +P +LI+ L Q
Sbjct: 353 VPDEFTYCSLINGLCQNDEIDR-ALALFNAALG-KGLKPTVILYNMLIKGLCQEGLILQA 410
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
+ + + D T + ++ + AN L+ I G + + FN+ + G
Sbjct: 411 LQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDG 470
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
Y K +TI + KM S G+ D Y ++ K +E + F +
Sbjct: 471 YCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPN 530
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y IL +SL K+G+ EAL ++ KGI D +A++I FA+ ++K A +
Sbjct: 531 KIT---YNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQ 587
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
LF+ E+ K+ + ++N F+
Sbjct: 588 LFRRMGEQ----------------------------------YKVSHTTATYNIMINAFA 613
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
++ K++ ++ + GC P TY +I+ +C K +EM +KGF +
Sbjct: 614 EKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLT 673
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ ++ R+ +A+ ++ M G P V
Sbjct: 674 TFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEV 707
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/328 (18%), Positives = 135/328 (41%), Gaps = 4/328 (1%)
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAEELFKEAEEKGM 325
S G+ G+ EA+ F M +PS+ Y +++ K A ++F + G+
Sbjct: 85 SYGRKGKVQEAVDVFERMDFYNC--EPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGI 142
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ D + + L ++ +M + +++ C +V GF + A +
Sbjct: 143 VPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYE 202
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++ ++ G P T+ +++ C+ ++E++ ++ +KG + ++ +
Sbjct: 203 LFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLC 262
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+ G + AM ++ + +G P+V YN+L+ + N+ + EK ++ + PD
Sbjct: 263 RKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGF 322
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y T+I Y + K G V D ++ + +I+ + L
Sbjct: 323 TYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAA 382
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQA 593
+G K LY+ + L GL +QA
Sbjct: 383 LGKGLKPTVILYNMLIKGLCQEGLILQA 410
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 74/161 (45%)
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y + YG+ G++++A+ + +M CEP+V YN++M++ + +Q K++ M
Sbjct: 78 VYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM 137
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + PD ++T I ++ R + ++ N G ++ +V F + +
Sbjct: 138 KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYR 197
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
E +L DM G D ++ ++ L G +++ L
Sbjct: 198 VEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERL 238
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 71/169 (42%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
Y + +Y R +A VF M + V++Y++++ + ++G + A + +M
Sbjct: 78 VYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM 137
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
K G P+V+ + + R K +L M + + V+Y TV++ +
Sbjct: 138 KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYR 197
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ +N+ G D + ++ K +++E +LL + +G
Sbjct: 198 VEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKG 246
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 182/453 (40%), Gaps = 13/453 (2%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQE---LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
H P+ F+ LH + K E L + F T + IR L +
Sbjct: 179 HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF-----TYNIWIRGLCE 233
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL-LA 188
+ + V L + + Y V PD T + L+ + + A L+ + G +
Sbjct: 234 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 292
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N+ + GY K+ M + + G V D YC ++ GD E+ LF E +
Sbjct: 293 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 352
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
++ + +Y L L G AL+ +M E+G D Y +I +
Sbjct: 353 AKGIKP---DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMG 409
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ A + +A KG L D L+ Y + ++ L +VE M +
Sbjct: 410 NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 469
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++NG K + ++++I +GC P +TY +I +CR +A KV ++M Q+
Sbjct: 470 SVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQE 529
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G V++++++ + + G + A L K++ KG +N+L+ N+
Sbjct: 530 GLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMA 589
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
EK++ EM + D +Y +I + D
Sbjct: 590 EKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 622
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 189/454 (41%), Gaps = 36/454 (7%)
Query: 148 VLPDAHTCS-RLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTI 206
V PD HT + RL + C+ AR IA LL+ G +A + + H
Sbjct: 116 VSPDLHTHTIRLRSFCLTARP-HIALRLLRALPHRGAVAYCTVVCGLYAHGHTH---DAR 171
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM----- 261
++++M + + + +++ A K GD + L + R + F+ ++
Sbjct: 172 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 231
Query: 262 --------------------------YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
Y L L K EA+ + R M +G L D
Sbjct: 232 CEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 291
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
Y ++I + I+ V+ A EL K+A KG + D L+ EG VE+ L++
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+ +K + ++V G + A++V ++ +GC P TY +IN C++
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
S A V + KG+ V +++++ Y K ++ A+ LV +M G P+ YNS+
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
++ +A + +V + ++EM + P+ ++Y +I + R+ + + K + G
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
D ++ F + +E L Q ++ +G
Sbjct: 532 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 565
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 145/326 (44%), Gaps = 4/326 (1%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
++C L G +A + F M + + + + ++ + +V A L + ++
Sbjct: 157 VVC-GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR 215
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWA 382
GM + + E G + + + +V+ M+ + D ++ ++ G K+
Sbjct: 216 GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR--AYAVPDVVTYNTLIRGLCKKSMPQE 273
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+ ++++QGC+P TY +II+ YC+I++ +A ++ + KGF V Y S++
Sbjct: 274 AMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 333
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
G + A+ L + +AKG +P++ +YNSL+ + ++ EM P
Sbjct: 334 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP 393
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D +Y VI+ + N+ M G + D ++ + K +++ ++L+
Sbjct: 394 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 453
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAG 588
+ M G D Y+S +N L AG
Sbjct: 454 ERMWEYGIAPDTITYNSVLNGLCKAG 479
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 161/405 (39%), Gaps = 41/405 (10%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
EL +D+ + VPD + S ++G+ + E A + +NEA+ +P+ L++
Sbjct: 311 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDV-ERALELFNEAQA-KGIKPDIVVYNSLVK 368
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA 185
L + + + PD T + ++ + A ++ I G +
Sbjct: 369 GLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLP 428
Query: 186 -LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+ FN+ + GY K S + + E+M GI D+ Y ++ K G +V F
Sbjct: 429 DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETF 488
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E + P + Y IL ++ +S + EA K M ++G+ D + +LI F
Sbjct: 489 QEMILKGCHPNPIT---YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGF 545
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+++ A LF++ EEKG T D ++
Sbjct: 546 CRNGDLEGAYLLFQKLEEKGY--------------------SATADTFNTL--------- 576
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+ FS + A K++++++S+G TY +I+ C+ A +A +E
Sbjct: 577 ------IGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVE 630
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
M +KGF + + ++ R+ A+ ++ M G P V
Sbjct: 631 MIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 675
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/365 (18%), Positives = 147/365 (40%), Gaps = 8/365 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y + AY + G F + L + P + Y + D+L + +A K +
Sbjct: 53 YVASIRAYARAGRLRDAVDAF---ERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYV 109
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
M G+ D + + SF +A L + +G + C + +Y G
Sbjct: 110 RMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV---AYCTVVCGLY-AHG 165
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
+ + M + + + +++ KR A + ++I +G TY
Sbjct: 166 HTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYN 225
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
I C +A ++ M+ VV Y++++ K ++AM + +M +
Sbjct: 226 IWIRGLCEAGRLPEAVRLVDGMRAYAVPD-VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 284
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
GC P+ + YN+++D + + +++ +L K+ + PD+V+Y ++I+ + +
Sbjct: 285 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 344
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++ +NE + G D + +V I ++++ +M EG D + Y+ +N
Sbjct: 345 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 404
Query: 584 LRDAG 588
L G
Sbjct: 405 LCKMG 409
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 97/226 (42%), Gaps = 1/226 (0%)
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
C +V G A ++++Q++ P + +++A C+ +A + ++ Q
Sbjct: 155 CTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQ 214
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
+G + Y+ + + GR+ +A+ LV M+A P+V YN+L+ + ++
Sbjct: 215 RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQE 273
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+ M + PD +Y T+I Y + + + G V D+ ++
Sbjct: 274 AMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 333
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+E ++L + +++G K D +Y+S + L GL + A
Sbjct: 334 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 379
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 152/369 (41%), Gaps = 38/369 (10%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+++M+ G+ D Y ++ + + E+ L E +R+LD + Y +L D
Sbjct: 384 FDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVT---YTVLIDG 440
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
K G+ EA + M ++G+ + Y +L +V+ A EL E KG
Sbjct: 441 YCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG---- 496
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+++ C +++NG K A++
Sbjct: 497 -------------------------------LELNACTYNSLINGLCKAGYLEQAMRTMA 525
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+ + P TY ++I+A C+ +A + EM KG +V Y+ ++ + +G
Sbjct: 526 DMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 585
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
R+ L+ M K PN YNSLM + N++ +++K M R V P++ +Y
Sbjct: 586 RVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYN 645
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I + +AR + F++E G + ++ + +K + E +L DM+ E
Sbjct: 646 ILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKE 705
Query: 569 GTKLDERLY 577
G + +Y
Sbjct: 706 GLTAESDVY 714
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 145/323 (44%), Gaps = 3/323 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y IL +L +GR +A + F +M D Y LI ++ E++ A +L E
Sbjct: 262 YNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMV 318
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
G+ + V +V + ++G + L VVE M K+ + + + +++GF +
Sbjct: 319 AGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLV 378
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+A + ++++ +G VTY ++IN CR +AEK+ EM + D V Y+ ++
Sbjct: 379 SARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLI 438
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y K G++ +A + M +G PNV Y +L D + +++ +L EM + +
Sbjct: 439 DGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLE 498
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
+ +Y ++I+ +A + ++ + D ++ K ++ L
Sbjct: 499 LNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSL 558
Query: 562 LQDMKSEGTKLDERLYHSAMNAL 584
LQ+M +G K Y+ MN
Sbjct: 559 LQEMLDKGIKPTIVTYNVLMNGF 581
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 119/288 (41%), Gaps = 12/288 (4%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQ---ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
P+ + + G+ K Q EL ++ N+ +L T LI L ++
Sbjct: 463 TPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLEL-----NACTYNSLINGLCKAGYL 517
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
+ + D + PD +T + L+ + ++ A++LLQ + G + ++ +N
Sbjct: 518 EQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVL 577
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
M G+ + + M I ++ Y +M+ Y + + ++ +SR
Sbjct: 578 MNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSR-- 635
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P + + Y IL K+ EAL F +M +KG + Y++LI +
Sbjct: 636 DVGP-NENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVE 694
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
A ELF + ++G+ + +V + + E +E TL + + + A +
Sbjct: 695 ARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEASI 742
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 194/453 (42%), Gaps = 10/453 (2%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALL----AFNSAMGGYNKLHMYYST 205
P+A + + ++A RA + A ++VF E A+L +N+ + G+ K +
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDA---VEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 69
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ ++M G+ ++ Y ++ + G + +AL E S+K+ F+ Y IL
Sbjct: 70 FRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFT---YSIL 126
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
D L ++G + L F + G+ + L+ +V +AEE+ + G+
Sbjct: 127 FDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGL 186
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ + L+ Y + G +E MK+ +K A++NG K A
Sbjct: 187 VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 246
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+ ++ G P T+ ++I+AY R K V EMQ+ G VV+Y S+V +
Sbjct: 247 LLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 306
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K G+I +A+ ++ M K PN +YN+++D + Q L ++M+ ++P V
Sbjct: 307 KNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIV 366
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y +I + + N + + D ++ I++ + L Q M
Sbjct: 367 TYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 426
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
G K R YH ++ L AG + ++L Q
Sbjct: 427 HKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQ 459
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/470 (19%), Positives = 181/470 (38%), Gaps = 33/470 (7%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + ++I + ++ + V + ++ VLP+ T + ++ ++ + L
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ G + + +N + G + T + ++M S +V D Y + + +
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132
Query: 234 IGDSEKVAALFLE--------------------CKSRKL-----------DSTPFSTH-M 261
GDS+ + +LF + CK K+ ++ T +
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L + ++G A F MK + I D Y +LI + A++L E +
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ G+ E L+ Y G +EK V+ M+ LK + +IVN F K
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
AV + + + + +P Y +II+AY +A + +M+ G +V Y+ ++
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+I +A ++ + P+ YN+L+ N+ + L + M + +
Sbjct: 373 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 432
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+Y +IS A + Y + N V AI IMV +SK
Sbjct: 433 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 482
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 182/453 (40%), Gaps = 13/453 (2%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQE---LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
H P+ F+ LH + K E L + F T + IR L +
Sbjct: 180 HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF-----TYNIWIRGLCE 234
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL-LA 188
+ + V L + + Y V PD T + L+ + + A L+ + G +
Sbjct: 235 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 293
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N+ + GY K+ M + + G V D YC ++ GD E+ LF E +
Sbjct: 294 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 353
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
++ + +Y L L G AL+ +M E+G D Y +I +
Sbjct: 354 AKGIKPDIV---VYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMG 410
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ A + +A KG L D L+ Y + ++ L +VE M +
Sbjct: 411 NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 470
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++NG K + ++++I +GC P +TY +I +CR +A KV ++M Q+
Sbjct: 471 SVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQE 530
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G V++++++ + + G + A L K++ KG +N+L+ N+
Sbjct: 531 GLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMA 590
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
EK++ EM + D +Y +I + D
Sbjct: 591 EKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 623
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 189/454 (41%), Gaps = 36/454 (7%)
Query: 148 VLPDAHTCS-RLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTI 206
V PD HT + RL + C+ AR IA LL+ G +A + + H
Sbjct: 117 VSPDLHTHTIRLRSFCLTARP-HIALRLLRALPHRGAVAYCTVVCGLYAHGHTH---DAR 172
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM----- 261
++++M + + + +++ A K GD + L + R + F+ ++
Sbjct: 173 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 232
Query: 262 --------------------------YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
Y L L K EA+ + R M +G L D
Sbjct: 233 CEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 292
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
Y ++I + I+ V+ A EL K+A KG + D L+ EG VE+ L++
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+ +K + ++V G + A++V ++ +GC P TY +IN C++
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
S A V + KG+ V +++++ Y K ++ A+ LV +M G P+ YNS+
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
++ +A + +V + ++EM + P+ ++Y +I + R+ + + K + G
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
D ++ F + +E L Q ++ +G
Sbjct: 533 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 566
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 145/326 (44%), Gaps = 4/326 (1%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
++C L G +A + F M + + + + ++ + +V A L + ++
Sbjct: 158 VVC-GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR 216
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWA 382
GM + + E G + + + +V+ M+ + D ++ ++ G K+
Sbjct: 217 GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR--AYAVPDVVTYNTLIRGLCKKSMPQE 274
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+ ++++QGC+P TY +II+ YC+I++ +A ++ + KGF V Y S++
Sbjct: 275 AMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 334
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
G + A+ L + +AKG +P++ +YNSL+ + ++ EM P
Sbjct: 335 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP 394
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D +Y VI+ + N+ M G + D ++ + K +++ ++L+
Sbjct: 395 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 454
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAG 588
+ M G D Y+S +N L AG
Sbjct: 455 ERMWEYGIAPDTITYNSVLNGLCKAG 480
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 161/405 (39%), Gaps = 41/405 (10%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
EL +D+ + VPD + S ++G+ + E A + +NEA+ +P+ L++
Sbjct: 312 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDV-ERALELFNEAQA-KGIKPDIVVYNSLVK 369
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA 185
L + + + PD T + ++ + A ++ I G +
Sbjct: 370 GLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLP 429
Query: 186 -LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+ FN+ + GY K S + + E+M GI D+ Y ++ K G +V F
Sbjct: 430 DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETF 489
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E + P + Y IL ++ +S + EA K M ++G+ D + +LI F
Sbjct: 490 QEMILKGCHPNPIT---YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGF 546
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+++ A LF++ EEKG T D ++
Sbjct: 547 CRNGDLEGAYLLFQKLEEKGY--------------------SATADTFNTL--------- 577
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+ FS + A K++++++S+G TY +I+ C+ A +A +E
Sbjct: 578 ------IGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVE 631
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
M +KGF + + ++ R+ A+ ++ M G P V
Sbjct: 632 MIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 676
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/365 (18%), Positives = 147/365 (40%), Gaps = 8/365 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y + AY + G F + L + P + Y + D+L + +A K +
Sbjct: 54 YVASIRAYARAGRLRDAVDAF---ERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYV 110
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
M G+ D + + SF +A L + +G + C + +Y G
Sbjct: 111 RMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV---AYCTVVCGLY-AHG 166
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
+ + M + + + +++ KR A + ++I +G TY
Sbjct: 167 HTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYN 226
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
I C +A ++ M+ VV Y++++ K ++AM + +M +
Sbjct: 227 IWIRGLCEAGRLPEAVRLVDGMRAYAVPD-VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 285
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
GC P+ + YN+++D + + +++ +L K+ + PD+V+Y ++I+ + +
Sbjct: 286 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 345
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++ +NE + G D + +V I ++++ +M EG D + Y+ +N
Sbjct: 346 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 405
Query: 584 LRDAG 588
L G
Sbjct: 406 LCKMG 410
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 97/226 (42%), Gaps = 1/226 (0%)
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
C +V G A ++++Q++ P + +++A C+ +A + ++ Q
Sbjct: 156 CTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQ 215
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
+G + Y+ + + GR+ +A+ LV M+A P+V YN+L+ + ++
Sbjct: 216 RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQE 274
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+ M + PD +Y T+I Y + + + G V D+ ++
Sbjct: 275 AMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 334
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+E ++L + +++G K D +Y+S + L GL + A
Sbjct: 335 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 380
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/507 (21%), Positives = 220/507 (43%), Gaps = 38/507 (7%)
Query: 131 KKWDSIVSLS--EDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE-IALL 187
KK DS+ +L + + +P +R++ C++ K A + ++ G+ + ++
Sbjct: 271 KKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVV 330
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+ M GY K S + +++KM GI ++ Y I+E K G+ +K ++ +
Sbjct: 331 VATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQM 390
Query: 248 KSRKLDSTPFSTH-------------------------------MYKILCDSLGKSGRAF 276
K++ + T F+ + Y L L K G+
Sbjct: 391 KNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMS 450
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
EA + M KG+ Y ++I ++ A +F E EKG+ P + V
Sbjct: 451 EACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGL--KPNLITYSV 508
Query: 337 LM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
LM Y ++G E + + M+ + SD I+NG K + ++L+ +G
Sbjct: 509 LMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEG 568
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
IP +TY II+ + + + A V+ EM + G V Y++++ + K+ + A+
Sbjct: 569 FIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLAL 628
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
++ +MK KG E +V +Y +L+D R ++ +L E++ ++P+KV Y+++IS +
Sbjct: 629 KVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGF 688
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ + + + + G D I ++ K ++ +L +M ++G D
Sbjct: 689 RKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDL 748
Query: 575 RLYHSAMNALRDAGLQMQAQWLQQNFE 601
Y ++ L + G AQ + ++ +
Sbjct: 749 ITYSVLIHGLCNKGQLENAQKILEDMD 775
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 208/448 (46%), Gaps = 6/448 (1%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
AY+ YN+ K + P + LIR ++++ + L D + + + T + L+
Sbjct: 383 AYEIYNQMKN-KDISPTVFNVNSLIRGYLKARSPEEASKLF-DEAVACGIANVFTYNSLL 440
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
+ + K A ++ + + G +++++N+ + G+ + S V+ +M G+
Sbjct: 441 SWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLK 500
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
+ Y +M+ Y+K GD+E L+ + + + F+ + I+ + L K+GR E+
Sbjct: 501 PNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCN---IIINGLCKAGRTSES 557
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+ + ++G + Y +I F V A ++ E + G+ + L+
Sbjct: 558 QDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLING 617
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+ + ++ L V++ MKN +++ + CA+++GF ++ A ++ +L G P
Sbjct: 618 FCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPN 677
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+V Y+S+I+ + ++ A + M +G + Y+++++ K G++ A L A
Sbjct: 678 KVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYA 737
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M AKG P++ Y+ L+ L +K+ ++M+R+ +TP Y T+I+ + +
Sbjct: 738 EMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEG 797
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ +NE G V D I+V
Sbjct: 798 NLQEAFRLHNEMLDKGLVPDDTTYDILV 825
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 147/324 (45%), Gaps = 1/324 (0%)
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
+ G+ EA +FR+ K KG+ D Y+ +I + + A L +E +KG +
Sbjct: 236 REGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEV 295
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
+ +++ + +++G + + + V M + ++ ++ ++ G+ K+ +A+++++++
Sbjct: 296 IFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKM 355
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
G P VTYA II C+ KA +++ +M+ K V +S++ Y K
Sbjct: 356 NENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSP 415
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
+A L + A G NV+ YNSL+ + + + +W++M R+ V P VSY +
Sbjct: 416 EEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNM 474
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
I + + + D + E G + +++ + K E L M+ E
Sbjct: 475 ILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENI 534
Query: 571 KLDERLYHSAMNALRDAGLQMQAQ 594
+ + +N L AG ++Q
Sbjct: 535 APSDFTCNIIINGLCKAGRTSESQ 558
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 146/340 (42%), Gaps = 39/340 (11%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL-LAFNSAMGGYNKLHMYYST 205
N+ P TC+ ++ +A + + L+ + +G I + +N + G+ K S
Sbjct: 533 NIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSA 592
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ VY +M G+ + Y ++ + CKS +D
Sbjct: 593 LAVYTEMCKIGVSPNVFTYTNLINGF---------------CKSNNMDL----------- 626
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
ALK +MK KGI D ++Y +LI F ++ A +L E +E G+
Sbjct: 627 ------------ALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGL 674
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ V ++ + + +E L + + M N + I +++G K A +
Sbjct: 675 SPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASE 734
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+Y +++++G +P +TY+ +I+ C A+K+ +M +K V Y++++ +
Sbjct: 735 LYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHF 794
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
K G +++A L +M KG P+ Y+ L++ + NL
Sbjct: 795 KEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 130/290 (44%), Gaps = 2/290 (0%)
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
V A +E SR+LD + ++ L +S K+ R +A+ F + EK I+ ++
Sbjct: 137 VVARLIE-SSRRLDFES-DSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNI 194
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
+ ++ A +++ + KG+ D ++ + EG +E+ KN
Sbjct: 195 FLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKG 254
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+++ ++ K+ AA+ + ++ +G +P +V + +I + +A
Sbjct: 255 VELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAV 314
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
KV EM G VV ++++ Y K G + A+ L KM G PN Y +++
Sbjct: 315 KVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWC 374
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
+ N+ + +++ +M+ + ++P + ++I Y +AR + K ++E
Sbjct: 375 CKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDE 424
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 75/169 (44%)
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
++N+Y + + A F + +K C+ + ++ K IR+A + KM +KG
Sbjct: 160 LLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKG 219
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+ + + ++ R L + E ++E + + V D +Y+ VI A + + +
Sbjct: 220 VKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAAL 279
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
E R G V I ++GV K ++ E VK+ +M S G ++
Sbjct: 280 GLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMN 328
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 83/186 (44%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A VY ++ S+G T + +I A R +AE F E + KG + AYS ++
Sbjct: 208 ARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIE 267
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
K A+ L+ +M+ KG P+ I+ ++ + + + + K+ EM
Sbjct: 268 AVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPM 327
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ V TT++ Y + + D ++ +++ NG + +++ K +++ ++
Sbjct: 328 NVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIY 387
Query: 563 QDMKSE 568
MK++
Sbjct: 388 NQMKNK 393
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 180/412 (43%), Gaps = 22/412 (5%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
F+ + G K + + ++M G V D+ Y +++ + EK LF E K
Sbjct: 423 FSRCLCGVGKFEKAFQ---ILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMK 479
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
++ ++ Y IL DS K+G +A +F +M+ G + Y +L+ ++
Sbjct: 480 RAGVNPDVYT---YTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSK 536
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM------------- 355
++ A ++F + + L+ + G ++K +V E +
Sbjct: 537 QLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYF 596
Query: 356 -KNAKLKISDCISC--AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
N I+ + A+++G K + A ++ + +++ GC P Q+ Y ++I+ +C+I
Sbjct: 597 EGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKI 656
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
A++VF+ M + G+ V Y+S++ K GR+ AM ++++M C PNV Y
Sbjct: 657 GKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTY 716
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+++D + + + L ME + +P+ V+YT +I + + D +K + +
Sbjct: 717 TAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNS 776
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G + +++ ++E LL +MK + YH A+
Sbjct: 777 KGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF 828
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 114/544 (20%), Positives = 224/544 (41%), Gaps = 71/544 (13%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
+I L+++ ++ +S + + +P+ T L++ ++ ++F ++ + +T+G
Sbjct: 277 MISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEG 336
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG---------IVLDSGCYCQIMEAYY 232
FNS + GY Y ++ +M + G I + S C + +
Sbjct: 337 CNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAE 396
Query: 233 KIGDSEKV--AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
+ EKV L C K+++ FS + LC +GK +AF+ LK +M KG
Sbjct: 397 LLDLVEKVYEEMLAASCVLNKVNTANFS----RCLC-GVGKFEKAFQILK---EMMRKGF 448
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
+ D S Y +I +V+ + LF+E + G+ D L+ + + GL+E+
Sbjct: 449 VPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARS 508
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ M++ + A+++ + K + A ++ +++ C P VTY+++I+ C
Sbjct: 509 WFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLC 568
Query: 411 RIALYSKAEKVFIEMQQ-----------KGFDKC-----VVAYSSMVAMYGKTGRIRDAM 454
+ KA +V+ ++ +G D C VV Y +++ K ++ DA
Sbjct: 569 KAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAH 628
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMH---GRAKNLRQV----------------------- 488
L+ M A GCEPN +Y++L+D G+ N ++V
Sbjct: 629 ELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRM 688
Query: 489 ---------EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
K+ EM P+ V+YT +I ++ E + + + G +
Sbjct: 689 FKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNV 748
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
++ K + + +KL + M S+G + Y +N AGL +A L
Sbjct: 749 VTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDE 808
Query: 600 FEGT 603
+ T
Sbjct: 809 MKHT 812
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/489 (21%), Positives = 204/489 (41%), Gaps = 54/489 (11%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ ST +I +L Q+KK + L ++ K V PD +T + L+ S +A + A
Sbjct: 448 FVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQAR 507
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + G ++ + + + Y K ++ +M A ++ Y +++
Sbjct: 508 SWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGL 567
Query: 232 YKIGDSEKVAALF--LECKSRKLDSTPF-----------STHMYKILCDSLGKSGRAFEA 278
K G+ +K ++ L S ++S + + Y L D L K+ + +A
Sbjct: 568 CKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDA 627
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+ M G + +Y +LI F I ++ A+E+F + G L P V
Sbjct: 628 HELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYL--PSV------- 678
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+ L+++ K+ +L + A+KV ++++ C P
Sbjct: 679 HTYTSLIDRMF------KDGRLDL--------------------AMKVLSEMLNDSCNPN 712
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
VTY ++I+ ++ KA + M++KG VV Y++++ GKTG+ ++ L
Sbjct: 713 VVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFK 772
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M +KGC PN Y L++ A L + L EM+ Y + + ++
Sbjct: 773 QMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF--SK 830
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE---ELVKLLQDMKSEGTKLDER 575
+F + E + V + G+++ FSK ++E EL K L ++ S
Sbjct: 831 KFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTG 890
Query: 576 LYHSAMNAL 584
+Y S + AL
Sbjct: 891 MYASLIQAL 899
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 144/349 (41%), Gaps = 29/349 (8%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA-SITEVKLAEELFKEA 320
Y L L +G+ + ++M G D S I FA ++ +V +
Sbjct: 207 YNALVQVLASAGQVEMGFRVQKEMSASGFCMDRST----IGYFAQALCKVGRWADALNML 262
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC--------AIVN 372
E++ D +C +++ +E L + + + M+ C SC +++
Sbjct: 263 EKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMR--------CNSCIPNVVTYRTLLS 314
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
GF K++ + ++ ++++GC P + S+++ YC Y+ A K+F M G
Sbjct: 315 GFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPP 374
Query: 433 CVVAYSSMVAMYGKTGRIRDA--MWLVAK----MKAKGCEPN-VWIYNSLMDMHGRAKNL 485
VAY+ + + +A + LV K M A C N V N + G K
Sbjct: 375 GYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGK-F 433
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ ++ KEM R+ PD +YT VI+ +A++ + + E + G D I+
Sbjct: 434 EKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTIL 493
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ F K IE+ +M+S G + Y + ++A + +QA
Sbjct: 494 IDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAH 542
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 135/331 (40%), Gaps = 14/331 (4%)
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
EAL+ +K+ G Y +L+ AS +V++ + KE G D +
Sbjct: 187 EALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMD-----RST 241
Query: 337 LMYIEEGL--VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
+ Y + L V + D + ++ + + +++G + + A+ ++
Sbjct: 242 IGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNS 301
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
CIP VTY ++++ + + + +++ M +G + ++S+V Y G A
Sbjct: 302 CIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAY 361
Query: 455 WLVAKMKAKGCEPNVWIYNSLM-DMHGR-----AKNLRQVEKLWKEMERRKVTPDKVSYT 508
L +M G P YN + + G+ A+ L VEK+++EM +KV+
Sbjct: 362 KLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTA 421
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+F+ + E G V D + ++ + ++E+ L Q+MK
Sbjct: 422 NFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRA 481
Query: 569 GTKLDERLYHSAMNALRDAGLQMQAQ-WLQQ 598
G D Y +++ AGL QA+ W +
Sbjct: 482 GVNPDVYTYTILIDSFCKAGLIEQARSWFDE 512
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 166/420 (39%), Gaps = 64/420 (15%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK----- 132
P+ + + LH LK Q + A+D ++ + P T LI L ++ +
Sbjct: 520 PNVVTYTALLHAYLKSKQLIQ-AHDIFHRMVDAACY-PNAVTYSALIDGLCKAGEIQKAC 577
Query: 133 --WDSIVSLS----EDF-----KIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
++ ++ S DF + P+ T L+ +A+K A+ LL +
Sbjct: 578 EVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAA 637
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G E + +++ + G+ K+ + V+ +M G + Y +++ +K G +
Sbjct: 638 GCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 697
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
+ E + DS + Y + D L K G +AL M+EKG + Y +L
Sbjct: 698 MKVLSEMLN---DSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTAL 754
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
I + + +LFK+ KG + L+ GL+++ +++ MK+
Sbjct: 755 IDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHW 814
Query: 361 -KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP---------------GQV---- 400
K CA V GFSK+ + A++ + E++ S +P G++
Sbjct: 815 PKHLQGYHCA-VQGFSKK--FIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETAL 871
Query: 401 -------------------TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
YAS+I A C + +A ++ EM +KG ++ + S+V
Sbjct: 872 ELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLV 931
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 77/187 (41%), Gaps = 9/187 (4%)
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
++ CR L+ +A + ++ G+ V Y+++V + G++ + +M A G
Sbjct: 175 LVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASG 234
Query: 465 -C--EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
C + + + GR + + +E+ D V T +IS A F+
Sbjct: 235 FCMDRSTIGYFAQALCKVGRWADALNM------LEKEDFNLDTVLCTQMISGLMEASLFN 288
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ F + R N + + ++ F K Q +++ M +EG + L++S +
Sbjct: 289 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLV 348
Query: 582 NALRDAG 588
+ +AG
Sbjct: 349 HGYCNAG 355
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 153/335 (45%), Gaps = 2/335 (0%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI-YASLICSFASITEVKLAEELFKE 319
++ L D L K G+ + L +MK I ++ Y LI F A ELF++
Sbjct: 359 LFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQ 418
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
E+G+ + LV + G V + ++ MK LK + A+++ F
Sbjct: 419 MNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNN 478
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A++ +E+++S GC P V Y S+I+ C + A V +++ GF Y+
Sbjct: 479 INRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNV 538
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
+++ + K ++ L+ +M+ G +P+ YN+L+ G+ + K+ ++M +
Sbjct: 539 LISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEG 598
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV-IDRAIAGIMVGVFSKLSQIEEL 558
+ P V+Y +I AY + D +K + E V + I I++ + + ++
Sbjct: 599 LRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRA 658
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ L++DMK + + + Y++ + +RD + +A
Sbjct: 659 ISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKA 693
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 179/457 (39%), Gaps = 56/457 (12%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF---- 178
L+ +L + + + L + + + P T LV +AR+ A LQVF
Sbjct: 287 LLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEA---LQVFDRLR 343
Query: 179 ------ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGI-VLDSGCYCQIMEAY 231
E ++ FN+ + G K+ + + E+MK I ++ Y +++ +
Sbjct: 344 GKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGF 403
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+K G+ ++ LF + + + L D L K GR A++FF +MK KG+
Sbjct: 404 FKAGNFDRAHELFRQMNEEGVQPNVIT---LNTLVDGLCKHGRVHRAVEFFNEMKGKGLK 460
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ + Y +LI +F + + A + F+E G D V L+ G + V
Sbjct: 461 GNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVV 520
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRR--------------------------------- 378
V +K A + +++GF K++
Sbjct: 521 VSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGK 580
Query: 379 --GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM-QQKGFDKCVV 435
+ A KV E++I +G P VTY +II+AYC + K+F EM V
Sbjct: 581 TGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTV 640
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+ ++ + + A+ L+ MK K PN YN+++ K L + +L M
Sbjct: 641 IYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRM 700
Query: 496 ERRKVTPDKVS---YTTVISAYNRAREFDMCVKFYNE 529
PD ++ T +SA + V+ Y +
Sbjct: 701 VEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQD 737
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 102/250 (40%), Gaps = 47/250 (18%)
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY----WA 382
+ P++C L+ + ++ G L V++ M A S ++ IV G R G
Sbjct: 172 KSPQLCHGLLRVLLKSGRAGDALHVLDEMPQANSGFS--VTGEIVFGELVRSGRSFPDGE 229
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
V + +L +G P ++ C G K VA+ +
Sbjct: 230 VVGLVAKLGERGVFPDGFKLTQLVGKLC------------------GDQKNGVAWEVLHC 271
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ M L + A C N+L+ GR ++++++ +L EME+RK+ P
Sbjct: 272 V----------MRLGGAVDAASC-------NALLTWLGRGRDIKRMNELLAEMEKRKIRP 314
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV------IDRAIAGIMVGVFSKLSQIE 556
V++ +++ +AR D ++ ++ R GG D + ++ K+ + E
Sbjct: 315 SVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEE 374
Query: 557 ELVKLLQDMK 566
+ + LL++MK
Sbjct: 375 DGLSLLEEMK 384
>gi|302804248|ref|XP_002983876.1| hypothetical protein SELMODRAFT_423148 [Selaginella moellendorffii]
gi|300148228|gb|EFJ14888.1| hypothetical protein SELMODRAFT_423148 [Selaginella moellendorffii]
Length = 414
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 156/330 (47%), Gaps = 9/330 (2%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L D K G E L +M E G D YA LI S+A + + A E+F+
Sbjct: 80 YHTLLDGCCKFGSPDELLAVISEMDECGTPPDARAYAFLIASYAKASMLDKASEIFQTLR 139
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG-Y 380
K + V LV +Y + + + +++M+ + K DCIS +V +R G Y
Sbjct: 140 RKNAGIESSVYSSLVWLYCQADRPKDAEEFLKAMEEDR-KDEDCISYNVVISAYQRMGCY 198
Query: 381 WAAVKVYEQLISQGCIP--GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A ++++ + + G+ TY +++ Y + + + +K+F EM
Sbjct: 199 SDATRIFQDMKKKKKKETLGRSTYKLMLDVYLKASDHDSFDKLFKEMLGSKVSGEASTLE 258
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+ V +Y ++DA WL + G V YN L+++ A N V+++++EM R
Sbjct: 259 AAVNLYASRDSVKDAEWLYENLAPSGSRLTVLGYNKLLELFLAAGNTAMVDRIYREMP-R 317
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNE-FRMNGGV---IDRAIAGIMVGVFSKLSQ 554
V+PD+ + V++A+ RA+ F V+ + E R +GGV +D ++V + K+ +
Sbjct: 318 VVSPDQTTRRLVMTAFLRAQSFRGAVELHEEILRESGGVQPLLDPQSFALLVRAYVKMER 377
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
E +KL+ M+ G K+DE +Y + +
Sbjct: 378 FFEAMKLVVLMRKAGMKVDEEIYEKVVTGM 407
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 2/210 (0%)
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
QG P Y ++++ C+ + V EM + G AY+ ++A Y K +
Sbjct: 71 QGAKPEFSCYHTLLDGCCKFGSPDELLAVISEMDECGTPPDARAYAFLIASYAKASMLDK 130
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A + ++ K +Y+SL+ ++ +A + E+ K ME + D +SY VIS
Sbjct: 131 ASEIFQTLRRKNAGIESSVYSSLVWLYCQADRPKDAEEFLKAMEEDRKDEDCISYNVVIS 190
Query: 513 AYNRAREFDMCVKFYNEFRMNGG--VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
AY R + + + + + + R+ +M+ V+ K S + KL ++M
Sbjct: 191 AYQRMGCYSDATRIFQDMKKKKKKETLGRSTYKLMLDVYLKASDHDSFDKLFKEMLGSKV 250
Query: 571 KLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ +A+N A+WL +N
Sbjct: 251 SGEASTLEAAVNLYASRDSVKDAEWLYENL 280
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/167 (18%), Positives = 79/167 (47%)
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
CV +++++ + + +A L+A+ K +G +P Y++L+D + + ++ +
Sbjct: 41 CVANSAALISFCHRVEDLDEARQLLARSKEQGAKPEFSCYHTLLDGCCKFGSPDELLAVI 100
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
EM+ PD +Y +I++Y +A D + + R I+ ++ +V ++ +
Sbjct: 101 SEMDECGTPPDARAYAFLIASYAKASMLDKASEIFQTLRRKNAGIESSVYSSLVWLYCQA 160
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
+ ++ + L+ M+ + D Y+ ++A + G A + Q+
Sbjct: 161 DRPKDAEEFLKAMEEDRKDEDCISYNVVISAYQRMGCYSDATRIFQD 207
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/488 (20%), Positives = 206/488 (42%), Gaps = 4/488 (0%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T ++I +L + + +L K PD T + L+ + + L
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ G A ++ +N+ + ++K + +MK G+V + + ++A+ K
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G ++ LF + + R + F+ Y L D K+GR +A+ +M +G++ +
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFT---YTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPN 374
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y ++ +V A+ + E G+ + + L+ + E+ LD++
Sbjct: 375 VVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLN 434
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
MKN +++ + ++ G K + A + ++ G P V Y +I++A +
Sbjct: 435 QMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAG 494
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
S+A + ++ GF VV Y +++ K G I +A+ KM+ G +PNV Y
Sbjct: 495 KESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYT 554
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+L+D + +L + L EM + ++ DKV YT++I Y + + +
Sbjct: 555 ALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIES 614
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G +D + F ++ ++E +L +M G D+ +Y+ + + G +A
Sbjct: 615 GLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEA 674
Query: 594 QWLQQNFE 601
LQ E
Sbjct: 675 SSLQNEME 682
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/529 (19%), Positives = 214/529 (40%), Gaps = 43/529 (8%)
Query: 111 PEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKI 170
P S + L+ L D V + V P+ TC+ ++ R R+ +
Sbjct: 128 PRRSALPSVVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGL 187
Query: 171 A---------------NTLLQVFITDGEIA-----------------LLAFNSAMGGYNK 198
N ++ +GE+ ++ +NS + GY K
Sbjct: 188 VRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGK 247
Query: 199 LHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DSTP 256
+ +M+ +G D Y ++ + K G EK + F E K + + +
Sbjct: 248 CGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVT 307
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
FST + D+ K G EA+K F M+ +G++ + Y SL+ + A L
Sbjct: 308 FSTFV-----DAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVL 362
Query: 317 FKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E +G++ P V V++ +EG V + +V+ M+ +K ++ + +++G
Sbjct: 363 LDEMVHQGLV--PNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGH 420
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
A+ + Q+ ++G Y ++I C+ +A+ + +M G
Sbjct: 421 FMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNT 480
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V Y++++ K G+ +A+ L+ K+ G +PNV Y +L+D +A ++ + + +
Sbjct: 481 VIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNK 540
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M + P+ +YT +I + + + + NE G +D+ + ++ + K +
Sbjct: 541 MRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQAN 600
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
+++ L M G +LD Y ++ + + +A+ + GT
Sbjct: 601 LQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGT 649
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/393 (19%), Positives = 166/393 (42%), Gaps = 12/393 (3%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
Q V + F +F+ K+ QE A + + + + P + T L+ ++ +
Sbjct: 299 QGVVANVVTFSTFVDAFCKEGLVQE-AMKLFAQMR-VRGMMPNEFTYTSLVDGTCKAGRL 356
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSA 192
D + L ++ ++P+ T + +V + K A+ +L + G A L + +
Sbjct: 357 DDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTL 416
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G+ + + + +MK+ G+ LD Y ++ K ++ +L + L
Sbjct: 417 IHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGL 476
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---CSFASITE 309
+T +Y + D+L K+G+ EA+ + + G + Y +LI C SI+E
Sbjct: 477 RP---NTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISE 533
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
A F + E G+ + + L+ + + G + K + ++ M + + + + +
Sbjct: 534 ---AISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTS 590
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++G+ K+ A + ++I G Y I+ +C + + +A V EM G
Sbjct: 591 LIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTG 650
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
Y+ ++ Y K G + +A L +M++
Sbjct: 651 ITPDKTVYNCLIRKYQKLGNMEEASSLQNEMES 683
>gi|224089803|ref|XP_002308816.1| predicted protein [Populus trichocarpa]
gi|222854792|gb|EEE92339.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 159/351 (45%), Gaps = 8/351 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y ++ + K D +K LF E R K D+ FST I C L A +A+++
Sbjct: 179 YNVTLKVFRKGRDLDKAEKLFDEMLERGVKPDNFTFSTI---ISCARL--CNLADKAVEW 233
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
F M G+ D +++I S+ V+ A L+ A D L+ +Y
Sbjct: 234 FEKMPSFGLEPDDVTLSTMIDSYGRAGNVEKALSLYDRARTGEWRLDATAFSTLIRIYKV 293
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G + L+V E MK +K + I +++ + + W K Y+ +I G P VT
Sbjct: 294 AGNFDGCLNVYEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDIIDNGLSPSFVT 353
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
YA++++AY R A K++ EM++KG VV Y+S++AM G + A+ + MK
Sbjct: 354 YAALLHAYGRARYGEDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDMK 413
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
+ G +P+ W ++S++ + + + E EM P+ T++I Y +A+ D
Sbjct: 414 SSGIKPDSWTFSSMITIFSCCGKVSEAENTLNEMFEAGFQPNIFILTSLIQCYGKAQRID 473
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
V +N D G ++ V ++ EEL KL++ + KL
Sbjct: 474 DVVNTFNRIFELVITPDDRFCGCLLNVMTQTPN-EELSKLVKCAERANPKL 523
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 156/340 (45%), Gaps = 38/340 (11%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
++ +++ A ALKFF++ + + +Y + F ++ AE+LF E E+
Sbjct: 148 VILNNMSNPDTALLALKFFQERLK--FNREVVVYNVTLKVFRKGRDLDKAEKLFDEMLER 205
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G+ D S ISCA + + + A
Sbjct: 206 GVKPD------------------------------NFTFSTIISCARLCNLADK-----A 230
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
V+ +E++ S G P VT +++I++Y R KA ++ + + A+S+++ +
Sbjct: 231 VEWFEKMPSFGLEPDDVTLSTMIDSYGRAGNVEKALSLYDRARTGEWRLDATAFSTLIRI 290
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
Y G + + +MKA G +PN+ IYN L+D GRAK QV+K ++++ ++P
Sbjct: 291 YKVAGNFDGCLNVYEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDIIDNGLSPS 350
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
V+Y ++ AY RAR + K Y E + G ++ + ++ + + L +++ V++ +
Sbjct: 351 FVTYAALLHAYGRARYGEDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFE 410
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQ-WLQQNFEG 602
DMKS G K D + S + G +A+ L + FE
Sbjct: 411 DMKSSGIKPDSWTFSSMITIFSCCGKVSEAENTLNEMFEA 450
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 139/315 (44%), Gaps = 1/315 (0%)
Query: 271 KSGRAFE-ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
+ GR + A K F +M E+G+ D ++++I A E F++ G+ D
Sbjct: 187 RKGRDLDKAEKLFDEMLERGVKPDNFTFSTIISCARLCNLADKAVEWFEKMPSFGLEPDD 246
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
++ Y G VEK L + + + + ++ ++ + + + VYE+
Sbjct: 247 VTLSTMIDSYGRAGNVEKALSLYDRARTGEWRLDATAFSTLIRIYKVAGNFDGCLNVYEE 306
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ + G P V Y +++A R + +K + ++ G V Y++++ YG+
Sbjct: 307 MKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDIIDNGLSPSFVTYAALLHAYGRARY 366
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
DA + +MK KG NV +YNS++ M ++ + +++++M+ + PD ++++
Sbjct: 367 GEDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSS 426
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+I+ ++ + NE G + I ++ + K +I+++V +
Sbjct: 427 MITIFSCCGKVSEAENTLNEMFEAGFQPNIFILTSLIQCYGKAQRIDDVVNTFNRIFELV 486
Query: 570 TKLDERLYHSAMNAL 584
D+R +N +
Sbjct: 487 ITPDDRFCGCLLNVM 501
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 9/238 (3%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
E A Y+ A+ E+R + + LIR + +D +++ E+ K V P+ +
Sbjct: 263 EKALSLYDRART-GEWRLDATAFSTLIRIYKVAGNFDGCLNVYEEMKALGVKPNLVIYNI 321
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+ + RA++ Q I +G + + + + + Y + +Y +MK G
Sbjct: 322 LLDAMGRAKRPWQVKKFYQDIIDNGLSPSFVTYAALLHAYGRARYGEDAFKIYREMKEKG 381
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGR 274
+ L+ Y I+ +G +K +F + KS K DS FS+ + C G+
Sbjct: 382 LGLNVVLYNSILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSC-----CGK 436
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
EA +M E G + I SLI + + F E + D C
Sbjct: 437 VSEAENTLNEMFEAGFQPNIFILTSLIQCYGKAQRIDDVVNTFNRIFELVITPDDRFC 494
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 174/402 (43%), Gaps = 38/402 (9%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N + GY + IL+ +M++ G++ Y +M + GD EK+A+L E +
Sbjct: 297 YNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMR 356
Query: 249 SRKLDSTPFSTHMYKILCDSLGK-----------------------------------SG 273
R+L P + +Y + D+L K G
Sbjct: 357 ERRL---PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEG 413
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
R EA + R+ + + S Y SLI F EV +A L E E+G D
Sbjct: 414 RVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFG 473
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ 393
L+ + G V + L V E M +L I +++G K++ AA + E+++ Q
Sbjct: 474 ALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQ 533
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
P + Y ++I+ + R +A K+F M+QKG VV Y++M+ Y + G + +A
Sbjct: 534 NVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEA 593
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ ++ M+ G P+ + Y +L+ + + N+ L +M +R+ P+ V+Y+++I+
Sbjct: 594 VECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLING 653
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
Y + + D + G + I++G K ++
Sbjct: 654 YCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKV 695
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 140/353 (39%), Gaps = 39/353 (11%)
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
G + LK G + + Y LI + +V L E E KG+L P V
Sbjct: 273 GLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLL--PTVV 330
Query: 333 LKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
LM +G +EK ++ M+ +L + I ++++ K R A+ V +Q+
Sbjct: 331 TYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQM 390
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVF---------------------------- 422
+ GC P +T++++I+ C+ +AE++
Sbjct: 391 FAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEV 450
Query: 423 -------IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+EM ++G VV + +++ G++ +A+ + KM A+ P+ IYN L
Sbjct: 451 IVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVL 510
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ + K L L +EM + V PDK YTT+I + R D K + G
Sbjct: 511 ISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGI 570
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
D M+ + + + E V+ + M+ G DE Y + + G
Sbjct: 571 HPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQG 623
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 160/370 (43%), Gaps = 3/370 (0%)
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
AG V ++ Y +++ Y + GD + L E +++ L T + Y L LG+ G
Sbjct: 287 GAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVT---YGTLMSWLGRKG 343
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
+ +M+E+ + + IY S+I + A + K+ G D
Sbjct: 344 DLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFS 403
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ 393
L+ +EG V++ ++ +L + ++++GF R A + +++ +
Sbjct: 404 TLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMER 463
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G P VT+ ++I+ S+A V +M + Y+ +++ K + A
Sbjct: 464 GHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAA 523
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
L+ +M + P+ ++Y +L+D R ++L + K+++ ME++ + PD V Y +I
Sbjct: 524 RNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKG 583
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
Y + + V+ + R G + D ++G ++K I + LL DM + +
Sbjct: 584 YCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPN 643
Query: 574 ERLYHSAMNA 583
Y S +N
Sbjct: 644 VVAYSSLING 653
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 3/173 (1%)
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
D +C +V G +K+ E GC+P V Y +I+ YCR + +
Sbjct: 259 DYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLG 318
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM+ KG VV Y ++++ G+ G + L+++M+ + PNV IYNS++D + +
Sbjct: 319 EMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCR 378
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAY---NRAREFDMCVKFYNEFRMN 533
+ Q + K+M PD ++++T+IS R +E + ++ + +N
Sbjct: 379 SASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELN 431
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 126/274 (45%), Gaps = 4/274 (1%)
Query: 313 AEELFKE--AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A +L+ E AEE G D C+ +V EGLVEK L ++E+ A + +
Sbjct: 243 ARKLYDEMLAEESGA-DDYSTCV-MVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++G+ +R + + ++ ++G +P VTY ++++ R K + EM+++
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
V Y+S++ K A+ ++ +M A GC+P+ +++L+ + +++ E+
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L +E R ++ P+ SYT++I + E + E G D G ++
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
Q+ E + + + M + D +Y+ ++ L
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGL 514
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 142/377 (37%), Gaps = 26/377 (6%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
PD F + +HG++ Q E A + + P+ + +LI L + K +
Sbjct: 466 TPDVVTFGALIHGLVVAGQVSEALLVREKMAAR--QLLPDANIYNVLISGLCKKKMLPAA 523
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+L E+ NV PD + + L+ +R A + + G ++ +N+ + G
Sbjct: 524 RNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKG 583
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
Y + M + M+ G + D Y ++ Y K G+ AL L C K
Sbjct: 584 YCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNIS--GALSLLCDMMKRRCQ 641
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P + Y L + K G A F M+ +G+ + Y LI S +V A
Sbjct: 642 P-NVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAM 700
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
F+ ML + L + GL ++ S ++ + +
Sbjct: 701 YFEY-----MLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNL------------- 742
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
G A + ++ L++ C P Y +II + C + +A + +M KG+
Sbjct: 743 --HGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSA 800
Query: 436 AYSSMVAMYGKTGRIRD 452
+ S++ + G+ R+
Sbjct: 801 TFLSLLYGFCSVGKSRE 817
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 183/404 (45%), Gaps = 19/404 (4%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGI---VLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+++ M GY + ++V++++K G V+ GC ++ Y KIG KV+
Sbjct: 417 YHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGC---LINLYTKIG---KVSKALQ 470
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
K K+ + Y +L + K A F D + G+ D +Y ++I +F
Sbjct: 471 ISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFC 530
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
++ + A + K+ +++ L ++ + G + + L++ + M+ S C
Sbjct: 531 GMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRR-----SGC 585
Query: 366 ISC-----AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
I A++ G ++R AV + +Q+ G P + TY +++ Y + KA +
Sbjct: 586 IPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQ 645
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
F ++ +G + V Y +++ K+GR++ A+ + +M AK N ++YN L+D
Sbjct: 646 YFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWA 705
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
R ++ + L ++M + V PD +YT+ ++A +A + + E G +
Sbjct: 706 RRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLK 765
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ +++ S E+ + ++MK K D+ YH M +L
Sbjct: 766 TYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMTSL 809
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 188/464 (40%), Gaps = 73/464 (15%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+E M++ GI S Y ++ AY D E+ + K ++ T + Y I+
Sbjct: 296 TFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVT---YSIIVG 352
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG--- 324
K G+A A +F++ KEK + Y S+I + + AE L +E E +G
Sbjct: 353 GFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDA 412
Query: 325 -------------MLRDPEVCLK-------------------LVLMYIEEGLVEKTLDVV 352
M+ + E CL L+ +Y + G V K L +
Sbjct: 413 PIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQIS 472
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ MK + +K + ++NGF K + + A V+E G P V Y +II A+C +
Sbjct: 473 KMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGM 532
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+ +A + +MQ++ + + ++ + + G +R A+ + M+ GC P V Y
Sbjct: 533 SNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTY 592
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N+L+ + + + + +M V P++ +YTT++ Y + + ++++ R
Sbjct: 593 NALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRN 652
Query: 533 NG------------------GVIDRAIA-----------------GIMVGVFSKLSQIEE 557
G G + A+A I++ +++ + E
Sbjct: 653 EGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWE 712
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
L+Q M+ EG D Y S +NA AG +A + Q E
Sbjct: 713 AADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEME 756
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 161/366 (43%), Gaps = 5/366 (1%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y +++ Y + GD F ++R ++ S+H+Y L + EAL R
Sbjct: 277 YGLMVKYYARRGDMHHARQTFESMQARGIEP---SSHVYSSLIHAYAVGRDMEEALHCVR 333
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
MKE+GI Y+ ++ FA + + A+ FKEA+EK + ++ + +
Sbjct: 334 KMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTC 393
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
+++ +V M+ + I +++G++ + V+++L G P ++Y
Sbjct: 394 NMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYG 453
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
+IN Y +I SKA ++ M+ G + YS ++ + K +A +
Sbjct: 454 CLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKD 513
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
G +P+V +YN+++ N+ + + K+M++ + P ++ +I + RA E
Sbjct: 514 GLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRA 573
Query: 524 VKFYNEFRMNGGVID-RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
++ ++ R +G + +++G+ K ++ + V +L M G +E Y + M
Sbjct: 574 LEIFDMMRRSGCIPTVHTYNALILGLVEK-RKMAKAVAILDQMNVAGVGPNEHTYTTLMQ 632
Query: 583 ALRDAG 588
G
Sbjct: 633 GYASLG 638
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/365 (18%), Positives = 157/365 (43%), Gaps = 4/365 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P + LI + K + +S+ K+ + + T S L+ ++ + + A
Sbjct: 445 FSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAF 504
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
++ + F DG + ++ +N+ + + + I + ++M+ + + I+ +
Sbjct: 505 SVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGF 564
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ G+ + +F R+ P + H Y L L + + +A+ M G+
Sbjct: 565 ARAGEMRRALEIF--DMMRRSGCIP-TVHTYNALILGLVEKRKMAKAVAILDQMNVAGVG 621
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y +L+ +AS+ + + A + F +G+ D L+ + G ++ L V
Sbjct: 622 PNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAV 681
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+ M + + + +++G+++R W A + +Q+ +G +P TY S +NA C+
Sbjct: 682 TKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCK 741
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
KA ++ EM+ G + Y++++ + + A+ +MK +P+
Sbjct: 742 AGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAA 801
Query: 472 YNSLM 476
Y+ LM
Sbjct: 802 YHCLM 806
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 136/343 (39%), Gaps = 71/343 (20%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV-----------ASCV---- 163
T +LI ++ K W + S+ EDF + PD + ++ A C+
Sbjct: 486 TYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQM 545
Query: 164 -RARKFKIANTLLQV---FITDGEI--ALLAFN--SAMGGYNKLHMYYSTIL-------- 207
+ R T L + F GE+ AL F+ G +H Y + IL
Sbjct: 546 QKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKM 605
Query: 208 -----VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF-------LE--------- 246
+ ++M AG+ + Y +M+ Y +GD+EK F LE
Sbjct: 606 AKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEAL 665
Query: 247 ----CKSRKLDST------------PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
CKS ++ S P +T +Y IL D + G +EA + M+++G+
Sbjct: 666 LKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGV 725
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
L D Y S + + +++ A E+ +E E G+ + + L+ + + EK L
Sbjct: 726 LPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALS 785
Query: 351 VVESMKNAKLKISDCI-SCAIVNGFSKRRGYWAAVKVYEQLIS 392
E MK A+LK C + + S R +A VY L+S
Sbjct: 786 CFEEMKLAELKPDKAAYHCLMTSLLS--RATFAQSYVYSGLLS 826
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 93/239 (38%), Gaps = 38/239 (15%)
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
W AV + I + P + Y ++ Y R A + F MQ +G + YSS+
Sbjct: 259 WQAVVTAFERIKK---PARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSL 315
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCE---------------------------------P 467
+ Y + +A+ V KMK +G E P
Sbjct: 316 IHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLP 375
Query: 468 --NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
N Y S++ H + N+ + E L +EME + + Y T++ Y + C+
Sbjct: 376 SLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLI 435
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ + G G ++ +++K+ ++ + +++ + MK G K + + Y +N
Sbjct: 436 VFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGF 494
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 139/327 (42%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L + L GR EA+ +M +KGI Y I S A +L + +
Sbjct: 275 YSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMK 334
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
++G + + L+ +G E + V M L + A++N +
Sbjct: 335 KRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFE 394
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+ ++E ++S +P TY II +C I KA +F +M + G V+ Y+ ++
Sbjct: 395 TALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIII 454
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+Y K G + +AM L+ MK G + + W Y +L+ R L L+ EM ++
Sbjct: 455 HIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGIS 514
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ V+Y +I+ Y + D + + + +G V +M+ FSK ++I E
Sbjct: 515 PNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENF 574
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAG 588
M +G + Y S ++ L G
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCKNG 601
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/392 (19%), Positives = 153/392 (39%), Gaps = 38/392 (9%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++++M G +S Y ++ G E+ + E + ++ T H Y I
Sbjct: 259 MFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPT---VHAYTIPIV 315
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
SL +GR+ EA+K MK++G + Y +LI + + ++A ++ + G++
Sbjct: 316 SLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVP 375
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
L+ EG E L + E M + + I+ GF A ++
Sbjct: 376 TAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIF 435
Query: 388 EQLISQGCIPGQVTY-----------------------------------ASIINAYCRI 412
+Q++ G P +TY A++I+ + R
Sbjct: 436 DQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRG 495
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
A +F EM + G VV Y++++ Y ++ DA+ L KM G P+ Y
Sbjct: 496 GKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTY 555
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N ++ + + + E +M ++ + P+ ++YT+ I + + K ++E +
Sbjct: 556 NMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKK 615
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+ ++ + Q E+ +LL D
Sbjct: 616 RDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD 647
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 183/432 (42%), Gaps = 23/432 (5%)
Query: 43 VNPSSIINHRFFQVNASTNFPTIE--LNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELA 100
V S++IN + + T E L+ DS +P+ + ++ + G Q+
Sbjct: 378 VTYSALINQLYVEGRFETALTIFEWMLSHDS-----LPNTETYNVIIKGFCSIGYIQKAT 432
Query: 101 YDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVA 160
+ K P P T ++I + ++ + L E K + D T + L++
Sbjct: 433 AIFDQMLKAGPS--PNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLIS 490
Query: 161 SCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVL 219
R K + A +L + G ++ +N+ + GY + + ++ KM +G V
Sbjct: 491 GFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVP 550
Query: 220 DSGCYCQIMEAYYK---IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
SG Y ++ + K I ++E K K P + Y D L K+GR
Sbjct: 551 SSGTYNMMISGFSKTNRISEAENFCG-----KMVKQGLLP-NVITYTSFIDGLCKNGRTS 604
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
A K F +MK++ + Y+SLI + + AE L + E + + LV
Sbjct: 605 LAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNV----DTYTTLV 660
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+G + +VESMK L+ S+ I A++ G K +A+K+++ +++ G
Sbjct: 661 RGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQ 720
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P Y ++I A C+ KA+ +F M +K ++ V ++ ++ K G ++ L
Sbjct: 721 PCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLEL 780
Query: 457 VAKMKAKGCEPN 468
+ M+++ C N
Sbjct: 781 LHVMESRNCTLN 792
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/451 (17%), Positives = 184/451 (40%), Gaps = 12/451 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE-FRPEKSTLKLLIRYLVQSKKWDSI 136
P+ + + + + G+ +D + E+A Y+ K L + P T LI L ++++
Sbjct: 340 PNVQTYTALISGLSRDGKF-EVAIGVYH--KMLADGLVPTAVTYSALINQLYVEGRFETA 396
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
+++ E ++ LP+ T + ++ + A + + G ++ +N +
Sbjct: 397 LTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHI 456
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
Y K + + + E MK G+ LD+ Y ++ + + G E +LF E +
Sbjct: 457 YFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPN 516
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y + + + +AL F M E G + Y +I F+ + AE
Sbjct: 517 VVT---YNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAEN 573
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ ++G+L + + + G + MK + C ++++G
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLC 633
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ + E+L+ GC P TY +++ C +A+++ M++KG
Sbjct: 634 QE----GQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEE 689
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y +++ K + A+ + M G +P + Y +L+ +A ++ + +++ M
Sbjct: 690 IYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTM 749
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
++ D+V +T ++ + E D+ ++
Sbjct: 750 LKKHWNSDEVVWTVLLDGLLKEGETDLSLEL 780
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 37/256 (14%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++ G K A +++++++ GC P VTY+++IN C +A + EM K
Sbjct: 242 SLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDK 301
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G + V AY+ + GR +A+ L+ KMK +GC PNV Y +L+ R
Sbjct: 302 GIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVA 361
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG-------------- 534
++ +M + P V+Y+ +I+ F+ + + E+ ++
Sbjct: 362 IGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIF-EWMLSHDSLPNTETYNVIIK 420
Query: 535 -----GVIDRAIA-----------------GIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
G I +A A I++ ++ K + ++LL+ MK G KL
Sbjct: 421 GFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKL 480
Query: 573 DERLYHSAMNALRDAG 588
D Y + ++ G
Sbjct: 481 DTWTYANLISGFSRGG 496
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 83/203 (40%)
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
VY ++++ G P T+ ++I C +AE + + G Y+S++ +
Sbjct: 189 VYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHC 248
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K G + A + +M GC+PN Y++L++ L + + +EM + + P
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVH 308
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+YT I + A VK + + G + ++ S+ + E + + M
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKM 368
Query: 566 KSEGTKLDERLYHSAMNALRDAG 588
++G Y + +N L G
Sbjct: 369 LADGLVPTAVTYSALINQLYVEG 391
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 31/167 (18%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 430 FDKCVVAYSSMVAMYGK---TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
F + ++S+++ GK G RD + +M G PN++ +N+++ + ++
Sbjct: 163 FGYTLYSFSTLLIQLGKFDMDGLGRD---VYIEMLNSGIRPNLFTFNAMIKILCNKGKVQ 219
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ E + + PD +YT++I + + D+ + ++ +G + ++
Sbjct: 220 EAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALI 279
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
++EE + +L++M +G + Y + +L DAG +A
Sbjct: 280 NGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEA 326
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 164/333 (49%), Gaps = 3/333 (0%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
A+++ + Y + + + M +AG+ ++ C ++EA+ + G +++++ +
Sbjct: 672 AYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRL 731
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
++ TP ++ + ++ + ++G EA +R M+E G ++ +L+ ++
Sbjct: 732 P--EMGITP-NSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRE 788
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
T AEEL K+ ++ G+ D ++ ++ +Y + G K V + M+
Sbjct: 789 TVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTF 848
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++ +S+ + A + ++I G P TY ++I+AY R+ Y AE VF + +
Sbjct: 849 NTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAE 908
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G AY+ M+ +Y K G R ++ +MKA G EP++ + LMD +G+ +
Sbjct: 909 TGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGK 968
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
E++ + + ++PD + YT++I+++ +++
Sbjct: 969 AEEVLETLPEIGMSPDAIHYTSIINSHLNNKDY 1001
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 173/371 (46%), Gaps = 28/371 (7%)
Query: 152 AHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEK 211
A L+ C+ A F++ ++ + V I + Y KL ++ + +V+
Sbjct: 616 AFVAHELLIDCLHA--FEVKDSAMHVAI-------------IASYGKLKLWQNAEIVFRD 660
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC----- 266
++ G ++ Y ++ AY + G+ E+ +R LD+ + C
Sbjct: 661 LQRHGFAGNTSAYSALLSAYAETGNFERA--------TRALDNMVAAGLQPNAACANYVL 712
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
++ G++G+A E +F++ + E GI + + + +F+ ++ A ++++ E G
Sbjct: 713 EAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFS 772
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+V L+ +Y E + ++V+ +K A L++ I +++ +SK Y A V
Sbjct: 773 PSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALV 832
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
++ + GC P T+ ++I Y R + +A+ + EM + G + Y+++++ YG+
Sbjct: 833 FKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGR 892
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
DA + + GC+P+ YN +++++ +A R++E++ ++M+ P +
Sbjct: 893 LQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTT 952
Query: 507 YTTVISAYNRA 517
++ +Y +
Sbjct: 953 IHMLMDSYGKG 963
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 193/446 (43%), Gaps = 8/446 (1%)
Query: 152 AHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM-GGYNKLHMYYSTILVYE 210
AH RL +A +F A ++ T G+ + F + Y++ M + +
Sbjct: 530 AHLYKRLALMLAKAGRFSEAEEEMRTSQTYGQAQVSDFLKVLVASYDRAGMQDEALARFL 589
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF-STHMYKILCDSL 269
M + G+ +D+ + Y + G + L ++C L + + M+ + S
Sbjct: 590 DMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDC----LHAFEVKDSAMHVAIIASY 645
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
GK A FRD++ G + S Y++L+ ++A + A G L+
Sbjct: 646 GKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAG-LQPN 704
Query: 330 EVCLKLVL-MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
C VL + G ++ + + + + + I + FS+ A +Y
Sbjct: 705 AACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYR 764
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
Q+ G P + +++ Y R + AE++ ++++ G + + Y+ M+++Y K G
Sbjct: 765 QMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLG 824
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
R A + M+ GC P+ +N+L+ ++ R + +++ + L +EM + P+ +YT
Sbjct: 825 SYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYT 884
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
T+ISAY R + ++ + G D +M+ V+ K + ++ ++++ MK++
Sbjct: 885 TLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKAD 944
Query: 569 GTKLDERLYHSAMNALRDAGLQMQAQ 594
G + H M++ G +A+
Sbjct: 945 GFEPSLTTIHMLMDSYGKGGATGKAE 970
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 126/275 (45%), Gaps = 4/275 (1%)
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+P + A ++ + LA+ELF AE + +V L+ +Y G ++
Sbjct: 79 NPRMLAVMLSVLGRANQPGLAQELFDRAE-SSIGNCVQVYNSLMSVYARHGDWNSVQQLL 137
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWA--AVKVYEQLISQGCIPGQVTYASIINAYC 410
M++ + D ++ IV R G A + + + + G P +TY ++I+A
Sbjct: 138 CRMQDRGCR-PDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACS 196
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
S A +F EMQ++G D + Y++M+++YG+ GR+ A + M+ +G P+
Sbjct: 197 LNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAV 256
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YNS++ R + +VE++ M + + D+++Y T+I Y +A + Y +
Sbjct: 257 TYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQM 316
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+ G D +++ K + E + +DM
Sbjct: 317 KEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDM 351
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/442 (18%), Positives = 186/442 (42%), Gaps = 44/442 (9%)
Query: 128 VQSKKWDSIVSLSEDFKIYN-VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL 186
V + W + L E + P+ + +++ RA + +A L + +
Sbjct: 55 VANTSWQRALELYECLNVARWYAPNPRMLAVMLSVLGRANQPGLAQELFDRAESSIGNCV 114
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+NS M Y + + S + +M+ G D + +++A + G E +A+ L+
Sbjct: 115 QVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQ 174
Query: 247 ---CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
+ D+ ++T L + + R +A+ F +M+ +G D Y ++I
Sbjct: 175 DVYAAGLRPDTITYNT-----LISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISV 229
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ V+ A +F+ +E+G D ++ + +G +E+ + M++A+
Sbjct: 230 YGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDAR---- 285
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
C ++TY ++I+ Y + ++ KAE++++
Sbjct: 286 -------------------------------CSSDEITYNTMIHMYGKAGMHRKAEELYV 314
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+M+++G V ++ ++ GK G + +A + M P + +++++ + +A
Sbjct: 315 QMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKAD 374
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
E + M R V PD ++Y+ ++ + +A + C+ Y +G + ++
Sbjct: 375 MFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKCIILYKAMVGSGLKPELSVYA 434
Query: 544 IMVGVFSKLSQIEELVKLLQDM 565
IMV VF + S + E+ L ++M
Sbjct: 435 IMVRVFYQKSSLAEIENLSKEM 456
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 151/363 (41%), Gaps = 51/363 (14%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ M ++ LG++ + A + F D E I +Y SL+ +A + ++L
Sbjct: 79 NPRMLAVMLSVLGRANQPGLAQELF-DRAESSIGNCVQVYNSLMSVYARHGDWNSVQQLL 137
Query: 318 KEAEEKGMLRDPEVCLKLVLMY-----IEEGLVEKTLDVV--ESMKNAKLKISDCIS-CA 369
+++G R V +V+ ++EGL L V ++ + + IS C+
Sbjct: 138 CRMQDRG-CRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACS 196
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+ N S A+ ++E++ QGC P TY ++I+ Y R A +F MQ++G
Sbjct: 197 LNNRLSD------AILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQG 250
Query: 430 FDKCVVAYSS-----------------------------------MVAMYGKTGRIRDAM 454
F V Y+S M+ MYGK G R A
Sbjct: 251 FTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAE 310
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L +MK +G P+ + L+D G+A + + ++++M + +V P +++ +I AY
Sbjct: 311 ELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAY 370
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+A F Y+ G D +M+ VF K E+ + L + M G K +
Sbjct: 371 AKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKCIILYKAMVGSGLKPEL 430
Query: 575 RLY 577
+Y
Sbjct: 431 SVY 433
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 133/325 (40%), Gaps = 6/325 (1%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF--ASITEVKLAEE 315
+ H+YK L L K+GR EA + R + G + L+ S+ A + + LA
Sbjct: 529 AAHLYKRLALMLAKAGRFSEAEEEMRTSQTYGQAQVSDFLKVLVASYDRAGMQDEALAR- 587
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
F + +G+ D EV V+ Y +G +++ +A + AI+ +
Sbjct: 588 -FLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFEVKDSAMHVAIIASYG 646
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K + + A V+ L G Y+++++AY + +A + M G
Sbjct: 647 KLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAA 706
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+ ++ +G+ G+ ++ ++ G PN + + R NL + ++++M
Sbjct: 707 CANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQM 766
Query: 496 ERRKVTPDKVSYTTVISAYNRAR-EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+P + +++ Y+R E D + + + G +D I M+ ++SKL
Sbjct: 767 REAGFSPSIQVFKALLALYSRETVEID-AEELVKDIKKAGLELDMDIYNHMISLYSKLGS 825
Query: 555 IEELVKLLQDMKSEGTKLDERLYHS 579
+ + + M+ G D +++
Sbjct: 826 YRKAALVFKGMQEIGCSPDATTFNT 850
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD-AMWLVAKM 460
Y S+++ Y R ++ +++ MQ +G +V ++ ++ + G A L+ +
Sbjct: 117 YNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDV 176
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
A G P+ YN+L+ L +++EM+R+ PD +Y +IS Y RA
Sbjct: 177 YAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRV 236
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ + + G D ++ F++ +IEE+ ++ M+ DE Y++
Sbjct: 237 EAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTM 296
Query: 581 MNALRDAGLQMQAQ--WLQQNFEG 602
++ AG+ +A+ ++Q EG
Sbjct: 297 IHMYGKAGMHRKAEELYVQMKEEG 320
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/428 (20%), Positives = 177/428 (41%), Gaps = 38/428 (8%)
Query: 78 PDAKKFDSFL----HGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
PD F+ + G +++ L D Y RP+ T LI + +
Sbjct: 147 PDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAG-----LRPDTITYNTLISACSLNNRL 201
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM 193
+ + E+ + PD T + +++ RA + + A+++ ++ G F
Sbjct: 202 SDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQG------FTPDA 255
Query: 194 GGYNK-LHMYYSTILVYEKMKSAGIVLDSGC------YCQIMEAYYKIGDSEKVAALFLE 246
YN LH + + E + G++ D+ C Y ++ Y K G K L+++
Sbjct: 256 VTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQ 315
Query: 247 CK--SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
K R DS F+ +L D+LGK+G EA F DM + + ++++IC++
Sbjct: 316 MKEEGRCPDSVTFT-----VLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAY 370
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
A AE + G+ D ++ ++ + + EK + + ++M + LK
Sbjct: 371 AKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKCIILYKAMVGSGLKPEL 430
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+ +V F ++ +++ E L S+ + + A++ + + Y++A V
Sbjct: 431 SVYAIMVRVFYQK----SSLAEIENL-SKEMVQSSASLAALSSTLAKGGFYAEAAVVLKI 485
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV--WIYNSLMDMHGRA 482
+G V + ++ + +G++ DA LV + + EP+V +Y L M +A
Sbjct: 486 SFAQGVAVKVETLNDVLGAFEASGKLSDARDLVHAVSS--IEPSVAAHLYKRLALMLAKA 543
Query: 483 KNLRQVEK 490
+ E+
Sbjct: 544 GRFSEAEE 551
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 206/483 (42%), Gaps = 58/483 (12%)
Query: 145 IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYS 204
+ +VL A R+ C RKF+ T ++ G NS + + KL M
Sbjct: 158 LVDVLALAKDVDRIRFICSEIRKFEFPMT-----VSPG-------NSLIKSFGKLGMVEE 205
Query: 205 TILVYEKMKSAGIVLDSGCYCQIMEAYYK---IGDSEKVAALFLECKSRKLDSTPFSTHM 261
+ V+ KMK GI Y +M + +E+V + +E K D ++T M
Sbjct: 206 LLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEV-MESGRIKPDVVTYNT-M 263
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
K C K+G+ +AL+ R M+ KG+ D Y ++I + + ++ L++E +
Sbjct: 264 IKGYC----KAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMD 319
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
EKG+ P ++ +EG + + V E+M K + I +++G++K
Sbjct: 320 EKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVE 379
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+++ ++I +G P VTY+ ++N C+ +A F + G + YSS++
Sbjct: 380 DAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLI 439
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
GK GR+ +A L +M KGC + + YN+L+D + + + L+K ME +
Sbjct: 440 DGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGC 499
Query: 502 PDKV-SYTTVIS---------------------------AYNRAREFDMCV--------K 525
V +YT +IS A RA +C+ K
Sbjct: 500 DQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACK 559
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
+E G ++D A M+ K +I+E KL + G ++ R+ +NALR
Sbjct: 560 ILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALR 618
Query: 586 DAG 588
G
Sbjct: 619 KVG 621
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 152/368 (41%), Gaps = 42/368 (11%)
Query: 223 CYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFF 282
CY +++ D +++ F+ + RK + P + L S GK G E L +
Sbjct: 154 CYVSLVDVLALAKDVDRIR--FICSEIRKFE-FPMTVSPGNSLIKSFGKLGMVEELLWVW 210
Query: 283 RDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYI 340
R MKE GI Y L+ S V AE +F E E G ++ P+V ++ Y
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIK-PDVVTYNTMIKGYC 268
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ G +K L+ + M+ ++G ++
Sbjct: 269 KAGQTQKALEKLRVME-----------------------------------TKGLEADKI 293
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TY ++I A + +S ++ EM +KG A+S ++ K G++ + + M
Sbjct: 294 TYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENM 353
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
KG +PNV IY L+D + + ++ +L M PD V+Y+ V++ +
Sbjct: 354 IRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRV 413
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ + ++ R NG I+ ++ K +++E +L ++M +G D Y++
Sbjct: 414 EEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 473
Query: 581 MNALRDAG 588
++A G
Sbjct: 474 IDAFTKHG 481
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 182/401 (45%), Gaps = 13/401 (3%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+++ M GY + ++V++++K G Y ++ Y K+G KV+ K
Sbjct: 427 YHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVG---KVSKALEISK 483
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
K+ + Y +L + K A F D + G+ D +Y ++I +F +
Sbjct: 484 MMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMG 543
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ A + ++ +++ L ++ + G + + L++ + M+ S CI
Sbjct: 544 NMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRR-----SGCIPT 598
Query: 369 -----AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
A++ G ++R AV + +++ G P + TY +++ Y + KA + F
Sbjct: 599 VHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFT 658
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
++ +G + V Y +++ K+GR++ A+ + +M AK N ++YN L+D R
Sbjct: 659 VLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRG 718
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
++ + L ++M + + PD +YT+ I+A +A + + E +G +
Sbjct: 719 DVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYT 778
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ +++ S E+ + ++MK G K D+ +YH + +L
Sbjct: 779 TLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSL 819
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 187/466 (40%), Gaps = 73/466 (15%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+E M++ GI S Y ++ AY D E+ + K ++ T + Y I+
Sbjct: 306 TFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVT---YSIIVG 362
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG--- 324
K G A A +F + KEK + IY +I + I + AE L +E EE+G
Sbjct: 363 GFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDA 422
Query: 325 -------------MLRDPEVCLK-------------------LVLMYIEEGLVEKTLDVV 352
M+ + E CL L+ +Y + G V K L++
Sbjct: 423 PIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEIS 482
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ MK + +K + ++NGF K + + A V+E G P V Y +II A+C +
Sbjct: 483 KMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGM 542
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+A + +MQ++ + ++ + + G +R A+ + M+ GC P V Y
Sbjct: 543 GNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTY 602
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N+L+ + + + + EM V P++ +YTT++ Y + + +++ R
Sbjct: 603 NALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRN 662
Query: 533 NG------------------GVIDRAIA-----------------GIMVGVFSKLSQIEE 557
G G + A+A I++ +++ + E
Sbjct: 663 EGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWE 722
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
L+Q M+ EG D Y S +NA AG +A + Q E +
Sbjct: 723 AADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEAS 768
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 162/366 (44%), Gaps = 5/366 (1%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y +++ Y + GD F ++R ++ S+H+Y L + EAL R
Sbjct: 287 YGLMVKYYGRRGDMHHARQTFESMRARGIEP---SSHVYSSLIHAYAVGRDMEEALHCVR 343
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
MKE+GI Y+ ++ FA + A+ F+EA+EK + + ++ + +
Sbjct: 344 KMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQIC 403
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
+++ +V M+ + I +++G++ + V+++L G P ++Y
Sbjct: 404 NMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYG 463
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
+IN Y ++ SKA ++ M+ G + YS ++ + K +A +
Sbjct: 464 CLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKD 523
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
G +P+V +YN+++ N+ + + ++M++ + P ++ +I + RA E
Sbjct: 524 GLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRA 583
Query: 524 VKFYNEFRMNGGVID-RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
++ ++ R +G + +++G+ K Q+ + V +L +M G +E Y + M
Sbjct: 584 LEIFDMMRRSGCIPTVHTYNALILGLVEK-RQMTKAVAILDEMNVAGVGPNEHTYTTLMQ 642
Query: 583 ALRDAG 588
G
Sbjct: 643 GYASLG 648
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 144/336 (42%), Gaps = 39/336 (11%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV-----------ASCV---- 163
T +LI ++ K W + S+ EDF + PD + ++ A C+
Sbjct: 496 TYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQM 555
Query: 164 -RARKFKIANTLLQV---FITDGEI--ALLAFN--SAMGGYNKLHMYYSTIL-------- 207
+ R T L + F GE+ AL F+ G +H Y + IL
Sbjct: 556 QKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQM 615
Query: 208 -----VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMY 262
+ ++M AG+ + Y +M+ Y +GD+EK F ++ L+ + Y
Sbjct: 616 TKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLE---IDVYTY 672
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
+ L S KSGR AL ++M K I + +Y LI +A +V A +L ++ +
Sbjct: 673 EALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRK 732
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
+G+L D + + G ++K ++++ M+ + +K + ++NG+++
Sbjct: 733 EGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEK 792
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
A+ +E++ G P + Y ++ + A ++++
Sbjct: 793 ALSCFEEMKLAGFKPDKAVYHCLVTSLLSRATFAQS 828
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 93/239 (38%), Gaps = 38/239 (15%)
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
W AV + I + P + Y ++ Y R A + F M+ +G + YSS+
Sbjct: 269 WQAVVTAFERIKK---PARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSL 325
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCE---------------------------------P 467
+ Y + +A+ V KMK +G E P
Sbjct: 326 IHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLP 385
Query: 468 --NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
N IY ++ H + N+ + E L +EME + + Y T++ Y + C+
Sbjct: 386 SLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLI 445
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ + G G ++ +++K+ ++ + +++ + MK G K + + Y +N
Sbjct: 446 VFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGF 504
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/587 (20%), Positives = 215/587 (36%), Gaps = 70/587 (11%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
+ A PD F + ++ + K + + A + + + +KL P T +I L Q+ +
Sbjct: 237 EGACPDVFSFTNVINALCKGGKMEN-AIELFMKMEKL-GISPNVVTYNCIINGLCQNGRL 294
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
D+ L E + V P+ T L+ ++ F N +L I G ++ FN+
Sbjct: 295 DNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNL 354
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY K+ + + + M S I S +M+ + K E E S L
Sbjct: 355 IDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGL 414
Query: 253 DSTP-------------FSTH-------------------MYKILCDSLGKSGRAFEALK 280
P F H + +L L K G+ EA +
Sbjct: 415 SIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATE 474
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
+ + EKG +LI ++ A + KE E+G+ D L+L +
Sbjct: 475 LWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFC 534
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
EG VE + E M ++ ++ G A+K++++ + G I
Sbjct: 535 NEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIH 594
Query: 401 TYASIINAYCRIALYSKAEKVFIE-----------------------------------M 425
TY ++ YC+ E +F E M
Sbjct: 595 TYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENM 654
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+ KG YSS++ G + DA L+ +M+ +G PNV Y +L+ + + +
Sbjct: 655 KSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQM 714
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
E W EM + P+K +YT +I Y + + + + +G V D ++
Sbjct: 715 DTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVL 774
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
F K + ++ K+ M +EG +DE Y + ++ + Q
Sbjct: 775 TNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGWNPPTITGQ 821
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/488 (18%), Positives = 205/488 (42%), Gaps = 15/488 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYN--VLPDAHTCSRLVASCVRARKFKIAN 172
P T L+ LV++ +++ E F++ + PD + + ++ + + K + A
Sbjct: 207 PSLKTCNFLLSSLVKANEFEKCC---EVFRVMSEGACPDVFSFTNVINALCKGGKMENA- 262
Query: 173 TLLQVFITDGEIAL----LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
+++F+ ++ + + +N + G + + + EKM G+ + Y ++
Sbjct: 263 --IELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALI 320
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
K+ +KV + E + + ++ L D K G ALK M K
Sbjct: 321 NGLIKLNFFDKVNHVLDEMIGSGFNP---NVVVFNNLIDGYCKMGNIEGALKIKDVMISK 377
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
I SL+ F +++ AE +E G+ P+ C +V ++
Sbjct: 378 NITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSA 437
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+ M + + SD + +V G K + A +++ +L+ +G +VT ++I+
Sbjct: 438 FRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHG 497
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
C +A ++ EM ++G + Y++++ + G++ L +M +G +P+
Sbjct: 498 LCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPD 557
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
++ YN L+ L KLW E + + + +Y ++ Y +A + +N
Sbjct: 558 IYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFN 617
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E ++ + I++ + + ++LL++MKS+G + Y S ++ + + G
Sbjct: 618 ELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIG 677
Query: 589 LQMQAQWL 596
L A+ L
Sbjct: 678 LVEDAKHL 685
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/428 (19%), Positives = 176/428 (41%), Gaps = 42/428 (9%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
++ S G D + ++ A K G E LF+ K KL +P + Y + + L
Sbjct: 233 RVMSEGACPDVFSFTNVINALCKGGKMENAIELFM--KMEKLGISP-NVVTYNCIINGLC 289
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
++GR A + M KG+ + Y +LI + + E G +
Sbjct: 290 QNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVV 349
Query: 331 VCLKLVLMYIEEGLVEKTL----------------------------DVVESMKNAKLKI 362
V L+ Y + G +E L D +E +NA +I
Sbjct: 350 VFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEI 409
Query: 363 ---------SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+C S +V+ K+ Y +A + + ++S+ P + ++ C+
Sbjct: 410 LSSGLSIHPDNCYS--VVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDG 467
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ +A +++ + +KG V ++++ G++ +A +V +M +G + YN
Sbjct: 468 KHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYN 527
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+L+ + +L +EM +R + PD +Y ++ + D +K ++EF+ +
Sbjct: 528 ALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKAS 587
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G + + GIM+ + K ++IE++ L ++ S+ +L+ +Y+ + A G A
Sbjct: 588 GLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAA 647
Query: 594 QWLQQNFE 601
L +N +
Sbjct: 648 LQLLENMK 655
>gi|9755842|emb|CAC01928.1| 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana]
Length = 702
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 164/354 (46%), Gaps = 9/354 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y M+ + K D EK LF E R K D+ F+T + ++G A+++
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTT-----IISCARQNGVPKRAVEW 232
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
F M G D A++I ++ V +A L+ A + D L+ +Y
Sbjct: 233 FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGV 292
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G + L++ E MK +K + I +++ + + W A +Y+ LI+ G P T
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWST 352
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
YA+++ AY R A ++ EM++KG V+ Y+++++M G + +A + MK
Sbjct: 353 YAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADIGYVDEAFEIFQDMK 412
Query: 462 -AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ C+P+ W ++SL+ ++ + + + E +M P T+VI Y +A++
Sbjct: 413 NCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQV 472
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
D V+ +++ G D G ++ V ++ + EE+ KL+ ++ KL +
Sbjct: 473 DDVVRTFDQVLELGITPDDRFCGCLLNVMTQ-TPSEEIGKLIGCVEKAKPKLGQ 525
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 117/253 (46%), Gaps = 38/253 (15%)
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+++E+MK ++ I ++ + F K + + K++++++ +G P T+ +II+
Sbjct: 164 NLLETMKPSREVILYNVTMKV---FRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCA 220
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG----------RIRDAMWLV-- 457
+ + +A + F +M G + V ++M+ YG+ G R R W +
Sbjct: 221 RQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDA 280
Query: 458 -----------------------AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+MKA G +PN+ IYN L+D GRAK Q + ++K+
Sbjct: 281 VTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKD 340
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+ TP+ +Y ++ AY RAR D + Y E + G + + ++ + + +
Sbjct: 341 LITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADIGY 400
Query: 555 IEELVKLLQDMKS 567
++E ++ QDMK+
Sbjct: 401 VDEAFEIFQDMKN 413
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 120/292 (41%), Gaps = 66/292 (22%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK--LDSTPFSTH------ 260
+EKM S G D+ +++AY + G+ + +L+ ++ K +D+ FST
Sbjct: 233 FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGV 292
Query: 261 ------------------------MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+Y L DS+G++ R ++A ++D+ G + S
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWST 352
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
YA+L+ ++ A +++E +EKG+ + L+ M + G V++ ++ + MK
Sbjct: 353 YAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADIGYVDEAFEIFQDMK 412
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
N + C P T++S+I Y S
Sbjct: 413 NC----------------------------------ETCDPDSWTFSSLITVYACSGRVS 438
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+AE ++M++ GF+ + +S++ YGK ++ D + ++ G P+
Sbjct: 439 EAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 10/239 (4%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A Y+ A+ ++R + T LIR S +D +++ E+ K V P+ +R
Sbjct: 262 DMALSLYDRART-EKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 320
Query: 158 LVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM-GGYNKLHMYYSTILVYEKMKSAG 216
L+ S RA++ A + + IT+G + +A+ Y + + +Y +MK G
Sbjct: 321 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLE---CKSRKLDSTPFSTHMYKILCDSLGKSG 273
+ L Y ++ IG ++ +F + C++ DS FS+ + C SG
Sbjct: 381 LSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYAC-----SG 435
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
R EA M+E G + S+I + +V F + E G+ D C
Sbjct: 436 RVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFC 494
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 35/167 (20%)
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS---------------- 512
V +YN M + ++K+L + EKL+ EM R + PD ++TT+IS
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234
Query: 513 -------------------AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
AY RA DM + Y+ R ID ++ ++
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ + + ++MK+ G K + +Y+ ++++ A QA+ + ++
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 182/453 (40%), Gaps = 13/453 (2%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQE---LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
H P+ F+ LH + K E L + F T + IR L +
Sbjct: 182 HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF-----TYNIWIRGLCE 236
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL-LA 188
+ + V L + + Y V PD T + L+ + + A L+ + G +
Sbjct: 237 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 295
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N+ + GY K+ M + + G V D YC ++ GD E+ LF E +
Sbjct: 296 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 355
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
++ + +Y L L G AL+ +M E+G D Y +I +
Sbjct: 356 AKGIKP---DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMG 412
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ A + +A KG L D L+ Y + ++ L +VE M +
Sbjct: 413 NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 472
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++NG K + ++++I +GC P +TY +I +CR +A KV ++M Q+
Sbjct: 473 SVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQE 532
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G V++++++ + + G + A L K++ KG +N+L+ N+
Sbjct: 533 GLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMA 592
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
EK++ EM + D +Y +I + D
Sbjct: 593 EKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 625
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 189/454 (41%), Gaps = 36/454 (7%)
Query: 148 VLPDAHTCS-RLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTI 206
V PD HT + RL + C+ AR IA LL+ G +A + + H
Sbjct: 119 VSPDLHTHTIRLRSFCLTARP-HIALRLLRALPHRGAVAYCTVVCGLYAHGHTH---DAR 174
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM----- 261
++++M + + + +++ A K GD + L + R + F+ ++
Sbjct: 175 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 234
Query: 262 --------------------------YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
Y L L K EA+ + R M +G L D
Sbjct: 235 CEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 294
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
Y ++I + I+ V+ A EL K+A KG + D L+ EG VE+ L++
Sbjct: 295 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 354
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+ +K + ++V G + A++V ++ +GC P TY +IN C++
Sbjct: 355 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
S A V + KG+ V +++++ Y K ++ A+ LV +M G P+ YNS+
Sbjct: 415 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 474
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
++ +A + +V + ++EM + P+ ++Y +I + R+ + + K + G
Sbjct: 475 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 534
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
D ++ F + +E L Q ++ +G
Sbjct: 535 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 568
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 145/326 (44%), Gaps = 4/326 (1%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
++C L G +A + F M + + + + ++ + +V A L + ++
Sbjct: 160 VVC-GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR 218
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWA 382
GM + + E G + + + +V+ M+ + D ++ ++ G K+
Sbjct: 219 GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR--AYAVPDVVTYNTLIRGLCKKSMPQE 276
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+ ++++QGC+P TY +II+ YC+I++ +A ++ + KGF V Y S++
Sbjct: 277 AMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 336
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
G + A+ L + +AKG +P++ +YNSL+ + ++ EM P
Sbjct: 337 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP 396
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D +Y VI+ + N+ M G + D ++ + K +++ ++L+
Sbjct: 397 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 456
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAG 588
+ M G D Y+S +N L AG
Sbjct: 457 ERMWEYGIAPDTITYNSVLNGLCKAG 482
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 161/405 (39%), Gaps = 41/405 (10%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
EL +D+ + VPD + S ++G+ + E A + +NEA+ +P+ L++
Sbjct: 314 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDV-ERALELFNEAQA-KGIKPDIVVYNSLVK 371
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA 185
L + + + PD T + ++ + A ++ I G +
Sbjct: 372 GLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLP 431
Query: 186 -LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+ FN+ + GY K S + + E+M GI D+ Y ++ K G +V F
Sbjct: 432 DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETF 491
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E + P + Y IL ++ +S + EA K M ++G+ D + +LI F
Sbjct: 492 QEMILKGCHPNPIT---YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGF 548
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+++ A LF++ EEKG T D ++
Sbjct: 549 CRNGDLEGAYLLFQKLEEKGY--------------------SATADTFNTL--------- 579
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+ FS + A K++++++S+G TY +I+ C+ A +A +E
Sbjct: 580 ------IGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVE 633
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
M +KGF + + ++ R+ A+ ++ M G P V
Sbjct: 634 MIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 678
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/365 (18%), Positives = 147/365 (40%), Gaps = 8/365 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y + AY + G F + L + P + Y + D+L + +A K +
Sbjct: 56 YVASIRAYARAGRLRDAVDAF---ERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYV 112
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
M G+ D + + SF +A L + +G + C + +Y G
Sbjct: 113 RMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV---AYCTVVCGLY-AHG 168
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
+ + M + + + +++ KR A + ++I +G TY
Sbjct: 169 HTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYN 228
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
I C +A ++ M+ VV Y++++ K ++AM + +M +
Sbjct: 229 IWIRGLCEAGRLPEAVRLVDGMRAYAVPD-VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 287
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
GC P+ + YN+++D + + +++ +L K+ + PD+V+Y ++I+ + +
Sbjct: 288 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 347
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++ +NE + G D + +V I ++++ +M EG D + Y+ +N
Sbjct: 348 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 407
Query: 584 LRDAG 588
L G
Sbjct: 408 LCKMG 412
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 97/226 (42%), Gaps = 1/226 (0%)
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
C +V G A ++++Q++ P + +++A C+ +A + ++ Q
Sbjct: 158 CTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQ 217
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
+G + Y+ + + GR+ +A+ LV M+A P+V YN+L+ + ++
Sbjct: 218 RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQE 276
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+ M + PD +Y T+I Y + + + G V D+ ++
Sbjct: 277 AMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 336
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+E ++L + +++G K D +Y+S + L GL + A
Sbjct: 337 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 382
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 184/456 (40%), Gaps = 39/456 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T LI + +W V + ++ + +++LPD T + L+ S + K K A +
Sbjct: 291 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDV 350
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G+ + ++ + GY +++ M GI D + +++AY
Sbjct: 351 FDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYAN 410
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G +K +F E + + + Y + +L + G+ +A++ F M ++G+ D
Sbjct: 411 CGMLDKAMIIFNEMRDHGVKPDVVT---YTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 467
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y LI F + + A+EL E GM LD+V
Sbjct: 468 KYAYHCLIQGFCTHGSLLKAKELILEIMNNGM----------------------RLDIV- 504
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+I+N K A +++ ++ G P V Y+ +++ YC +
Sbjct: 505 ------------FFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVG 552
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
KA +VF M G + VV Y ++V Y K GRI + + L +M KG +P+ +YN
Sbjct: 553 KMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYN 612
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
++D A + + EM + +K +Y V+ + + R FD + + E R
Sbjct: 613 IIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAM 672
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
ID M+ + ++EE L + G
Sbjct: 673 NVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSG 708
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 215/520 (41%), Gaps = 79/520 (15%)
Query: 150 PDAHTCSRLVASCVRARK-------------------FKIANTLLQVFI----TDGEIAL 186
P +HT + L+ C RA + IAN LL+ F TD + +
Sbjct: 113 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 172
Query: 187 LAFNSAMGGYNKLHMYYSTIL--------------VYEKMKSAGIVL--DSGCYCQIMEA 230
L + G YS +L + M G V D Y +++
Sbjct: 173 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDC 232
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
++K GD K LF E R + P Y + +L K+ +A F R M KG+
Sbjct: 233 FFKEGDVNKACDLFKEMVQRGI---PPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGV 289
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
L D Y +LI ++S + K A +FKE +L D L+ + G +++ D
Sbjct: 290 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARD 349
Query: 351 VVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
V ++M K + D S I +NG++ + +++ ++ G P T++ +I AY
Sbjct: 350 VFDTMA-MKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAY 408
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ KA +F EM+ G VV Y++++A + G++ DAM +M +G P+
Sbjct: 409 ANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 468
Query: 470 WIYNSLMD---MHG---RAKNL--------------------RQVEKLWKEMERRKV--- 500
+ Y+ L+ HG +AK L + KL + M+ + +
Sbjct: 469 YAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDL 528
Query: 501 ------TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
PD V Y+ ++ Y + + ++ ++ G + + G +V + K+ +
Sbjct: 529 TVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGR 588
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
I+E + L ++M +G K LY+ ++ L AG + A+
Sbjct: 589 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAK 628
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 149/343 (43%), Gaps = 7/343 (2%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALK-FFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ H+ K C++ R EAL E G + D Y+ L+ S + A++
Sbjct: 152 IANHLLKGFCEA----KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 207
Query: 316 LFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L + E G + P+V ++ + +EG V K D+ + M + ++V+
Sbjct: 208 LLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 267
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
K R A Q++++G +P TY ++I Y + +A +VF EM++
Sbjct: 268 LCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 327
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VV + ++ K G+I++A + M KG P+V+ Y +++ + L + L+
Sbjct: 328 VVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFD 387
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
M + PD +++ +I AY D + +NE R +G D ++ ++
Sbjct: 388 LMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIG 447
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++++ ++ M +G D+ YH + G ++A+ L
Sbjct: 448 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 490
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 194/484 (40%), Gaps = 47/484 (9%)
Query: 107 AKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRAR 166
++K+P P T ++++ + DS +SL D + +P++ L+ S +
Sbjct: 210 SRKIP---PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN 266
Query: 167 KFKIANTLLQ-VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
+ A LL+ +F+ FN + G K + +M G D Y
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+M KIG + LF ++ ++ L GR +A DM
Sbjct: 327 YLMNGLCKIGRVDAAKDLFYRIPKPEI-------VIFNTLIHGFVTHGRLDDAKAVLSDM 379
Query: 286 -KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
GI+ D Y SLI Y +EGL
Sbjct: 380 VTSYGIVPDVCTYNSLIYG-----------------------------------YWKEGL 404
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V L+V+ M+N K + +V+GF K A V ++ + G P V +
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I+A+C+ +A ++F EM +KG V ++S+++ + I+ A+WL+ M ++G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
N YN+L++ R +++ KL EM + D+++Y ++I RA E D
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + +G I++ + +EE V+ ++M G+ D ++S +N L
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 585 RDAG 588
AG
Sbjct: 645 CRAG 648
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 147/334 (44%), Gaps = 9/334 (2%)
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L K R EA K M +G D Y L+ I V A++LF +
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----- 350
Query: 328 DPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISD-CISCAIVNGFSKRRGYWAAV 384
PE+ + L+ ++ G ++ V+ M + + D C +++ G+ K A+
Sbjct: 351 -PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+V + ++GC P +Y +++ +C++ +A V EM G V ++ +++ +
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K RI +A+ + +M KGC+P+V+ +NSL+ ++ L ++M V +
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
V+Y T+I+A+ R E K NE G +D ++ + ++++ L +
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
M +G + +N L +G+ +A Q+
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 176/446 (39%), Gaps = 71/446 (15%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKI-----------------------------------G 235
+MK GIV + IM Y K G
Sbjct: 136 QMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSG 195
Query: 236 DSEKVAA-LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
+ KVAA +F + SRK+ T F+ + ++ + AL RDM + G + +
Sbjct: 196 NCHKVAANVFYDMLSRKIPPTLFT---FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNS 252
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
IY +LI S + V A +L +E G + D E ++L + + + +V
Sbjct: 253 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 312
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAA-----------VKVYEQLI------------ 391
M D ++NG K AA + ++ LI
Sbjct: 313 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDA 372
Query: 392 ---------SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
S G +P TY S+I Y + L A +V +M+ KG V +Y+ +V
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ K G+I +A ++ +M A G +PN +N L+ + + + ++++EM R+ P
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D ++ ++IS E + + G V + ++ F + +I+E KL+
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAG 588
+M +G+ LDE Y+S + L AG
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAG 578
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/521 (21%), Positives = 213/521 (40%), Gaps = 39/521 (7%)
Query: 1 MAMAISSSSDCSSALINTTYTCMKKSYRHTLFSTCKAFPFVTVNPSSIINHRFFQVNAST 60
+ + I S +C N Y + + TLF+ ++ F VN
Sbjct: 187 VVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTF------------GVVMKAFCAVNEID 234
Query: 61 NFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE------FR 114
+ + L RD VP++ + + +H + K + NEA +L E
Sbjct: 235 S--ALSLLRDMTKHGCVPNSVIYQTLIHSLSK--------CNRVNEALQLLEEMFLMGCV 284
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T +I L + + + + I PD T L+ + + A L
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 175 LQVFITDGEIALLAFNSAMGGY-NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
I EI + FN+ + G+ + + ++ + + S GIV D Y ++ Y+K
Sbjct: 345 FYR-IPKPEIVI--FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 234 IGDSEKVAALFLEC--KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
E + L LE R P + + Y IL D K G+ EA +M G+
Sbjct: 402 ----EGLVGLALEVLHDMRNKGCKP-NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK 456
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ + LI +F + A E+F+E KG D L+ E ++ L +
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWL 516
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+ M + + + ++N F +R A K+ +++ QG ++TY S+I CR
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCR 576
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
KA +F +M + G ++ + ++ ++G + +A+ +M +G P++
Sbjct: 577 AGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 636
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
+NSL++ RA + ++++++ + PD V++ T++S
Sbjct: 637 FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 148/355 (41%), Gaps = 49/355 (13%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---------------- 301
S +Y++L LG +G + MK++GI+ S++ S++
Sbjct: 110 SFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLM 169
Query: 302 --------C-----SFASITEV-------KLAEELFKEAEEKGMLRDPEVCLKLVLM--Y 339
C S+ + E+ K+A +F + + + P + V+M +
Sbjct: 170 LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI--PPTLFTFGVVMKAF 227
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
++ L ++ M + I +++ SK A+++ E++ GC+P
Sbjct: 228 CAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 287
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
T+ +I C+ ++A K+ M +GF + Y ++ K GR+ A L +
Sbjct: 288 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR 347
Query: 460 MKAKGCEPNVWIYNSLMD---MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ +P + I+N+L+ HGR + + V L + + PD +Y ++I Y +
Sbjct: 348 IP----KPEIVIFNTLIHGFVTHGRLDDAKAV--LSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+ ++ ++ R G + I+V F KL +I+E +L +M ++G K
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK 456
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/475 (21%), Positives = 199/475 (41%), Gaps = 4/475 (0%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++L L + LV +K+++ + L + + PD + + + V+ K A L
Sbjct: 145 PSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIEL 204
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ G + +N +GG K ++++M + + Y +++ Y K
Sbjct: 205 MTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCK 264
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G E+ + K ++ T + + L + L ++ EA + +M+ G + D
Sbjct: 265 VGQLEEAFNIRERMKVENVEPTIIT---FNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPD 321
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y +L V + L +EA KG+ C L+ +EG +EK +V++
Sbjct: 322 RFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLK 381
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
L IVNG+ + A E++ + G P VTY S++ +C +
Sbjct: 382 KFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMK 441
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+AEK +M +KG V Y++++ YG++ ++ +M+ KG +PNV Y
Sbjct: 442 NMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYG 501
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
L++ + N+ + E + +M R V P+ Y +I A + +F++E
Sbjct: 502 CLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAR 561
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
V I++ K ++ E L ++ +G D Y+S ++ AG
Sbjct: 562 EIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAG 616
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 205/492 (41%), Gaps = 42/492 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + T LI + + + ++ E K+ NV P T + L+ RA+ + A +
Sbjct: 250 PNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRV 309
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGI-VLDSGCYCQIMEAYY 232
L+ G + + + G+ K ++I + E+ G+ +LD C ++ A
Sbjct: 310 LEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSI-LLNALC 368
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K G+ EK + + L P + + + + G +A M+ G+
Sbjct: 369 KEGNMEKAEEVLKKFLENGL--APVGV-FFNTIVNGYCQVGDINKAYTTIEKMEAVGLRP 425
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ Y SL+ F + ++ AE+ K+ EKG+L + E L+ Y L ++ ++
Sbjct: 426 NHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQIL 485
Query: 353 ESMKNAKLK--------ISDCI-------SCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
E M+ LK + +C+ ++ G RG ++Y LI CI
Sbjct: 486 EEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIA 545
Query: 398 GQ--------------------VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
G+ VTY +IN C+ +AE + E+ +KG V+ Y
Sbjct: 546 GKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITY 605
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+S+++ Y G ++ A+ L MK G +P + Y+ L+ G+ + L VEK+++EM +
Sbjct: 606 NSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGK-EGLVLVEKIYQEMLQ 664
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ PD+V Y +I Y + ++ G D+ ++ K ++ +
Sbjct: 665 MNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHK 724
Query: 558 LVKLLQDMKSEG 569
+ L+ DMK G
Sbjct: 725 VKNLVNDMKIRG 736
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 214/511 (41%), Gaps = 53/511 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P F+S L+G+ + Q E A E + + F P++ T L ++ D+ +
Sbjct: 285 PTIITFNSLLNGLCR-AQMMEEAQRVLEEME-VYGFVPDRFTYTTLFDGHLKCGNVDASI 342
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL-LAFNSAMGGY 196
+LSE+ V +TCS L+ + + + A +L+ F+ +G + + FN+ + GY
Sbjct: 343 TLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGY 402
Query: 197 ---NKLHMYYSTILVYEKMKSAGIVLDSGCY-------CQI------------------- 227
++ Y+TI EKM++ G+ + Y C++
Sbjct: 403 CQVGDINKAYTTI---EKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVL 459
Query: 228 --MEAYYKIGDSEKVAALFLEC-------KSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
+E Y + D + LF C + + L S Y L + L K EA
Sbjct: 460 PNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVIS---YGCLINCLCKDANILEA 516
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
DM +G++ + IY LI ++K A F E + ++ L+
Sbjct: 517 EVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILING 576
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
++G V + ++ + L ++++G+S A+++YE + G P
Sbjct: 577 LCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPT 636
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
TY +I A C EK++ EM Q V Y++++ Y + G ++ A L +
Sbjct: 637 LNTYHRLI-AGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHS 695
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
M+A+G +P+ YN L+ H + + +V+ L +M+ R + P +Y +I + + +
Sbjct: 696 AMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLK 755
Query: 519 EFDMCVKFYNEFRMNG-----GVIDRAIAGI 544
+FD +Y E NG + D I G+
Sbjct: 756 DFDGAYVWYREMFENGFTPSVSICDNLITGL 786
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 144/340 (42%), Gaps = 41/340 (12%)
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
L STP +L +S E+ + + MK+ G+L PS+ ASL S+ K
Sbjct: 105 LSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVL--PSV-ASLNLFLESLVSTK 161
Query: 312 LAE---ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
E +LF E E G+ D + K + ++ G +++ ++++ MK + +
Sbjct: 162 RYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYN 221
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++ G K + A K++++++ + P ++TY ++I+ YC++
Sbjct: 222 VVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKV---------------- 265
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G++ +A + +MK + EP + +NSL++ RA+ + +
Sbjct: 266 -------------------GQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEA 306
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+++ +EME PD+ +YTT+ + + D + E G I I++
Sbjct: 307 QRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNA 366
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
K +E+ ++L+ G +++ +N G
Sbjct: 367 LCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVG 406
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 89/219 (40%), Gaps = 35/219 (15%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
+ ++Y + G +P + + + Y ++F E+ + G Y +
Sbjct: 131 SAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQ 190
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
K G ++ A+ L+ MK G P V++YN ++ + K ++ EKL+ EM R+V P
Sbjct: 191 AAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAP 250
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
++++Y T+I Y K+ Q+EE +
Sbjct: 251 NRITYNTLIDGY-----------------------------------CKVGQLEEAFNIR 275
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ MK E + ++S +N L A + +AQ + + E
Sbjct: 276 ERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEME 314
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/391 (20%), Positives = 154/391 (39%), Gaps = 46/391 (11%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV----ASCVRARKF 168
RP T L++ + K + + VLP+ T + L+ SC+ R F
Sbjct: 423 LRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCF 482
Query: 169 KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
+I + + + ++++ + K ++ M G+V ++ Y ++
Sbjct: 483 QILEEMEKKGLKPN---VISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLI 539
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
+ G + F E +R++ T + Y IL + L K G+ EA ++ K
Sbjct: 540 DGSCIAGKLKDAFRFFDEMVAREIVPTLVT---YNILINGLCKKGKVMEAENLASEITRK 596
Query: 289 GILEDPSIYASLICSFASITEVK----------------------------------LAE 314
G+ D Y SLI ++S V+ L E
Sbjct: 597 GLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVE 656
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI-SCAIVNG 373
++++E + ++ D + L+ Y+E G V+K + +M+ ++ +C I+
Sbjct: 657 KIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGH 716
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
F + R + V + I +G IP TY +I +C++ + A + EM + GF
Sbjct: 717 FKEGRMHKVKNLVNDMKI-RGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPS 775
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
V +++ + GR DA + ++M KG
Sbjct: 776 VSICDNLITGLREEGRSHDADVICSEMNMKG 806
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 110/287 (38%), Gaps = 5/287 (1%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTI 206
V+P+A + L+ A K K A + + L+ +N + G K
Sbjct: 528 VVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAE 587
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
+ ++ G+ D Y ++ Y G+ +K L+ K + T + Y L
Sbjct: 588 NLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPT---LNTYHRLI 644
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
GK G K +++M + ++ D IY +LI + +V+ A L E +G+
Sbjct: 645 AGCGKEGLVL-VEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQ 703
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D L+L + +EG + K ++V MK L ++ G K + + A
Sbjct: 704 PDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVW 763
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
Y ++ G P ++I A+ + EM KG D C
Sbjct: 764 YREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKGKDDC 810
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/587 (20%), Positives = 215/587 (36%), Gaps = 70/587 (11%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
+ A PD F + ++ + K + + A + + + +KL P T +I L Q+ +
Sbjct: 214 EGACPDVFSFTNVINALCKGGKMEN-AIELFMKMEKL-GISPNVVTYNCIINGLCQNGRL 271
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
D+ L E + V P+ T L+ ++ F N +L I G ++ FN+
Sbjct: 272 DNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNL 331
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY K+ + + + M S I S +M+ + K E E S L
Sbjct: 332 IDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGL 391
Query: 253 DSTP-------------FSTH-------------------MYKILCDSLGKSGRAFEALK 280
P F H + +L L K G+ EA +
Sbjct: 392 SIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATE 451
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
+ + EKG +LI ++ A + KE E+G+ D L+L +
Sbjct: 452 LWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFC 511
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
EG VE + E M ++ ++ G A+K++++ + G I
Sbjct: 512 NEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIH 571
Query: 401 TYASIINAYCRIALYSKAEKVFIE-----------------------------------M 425
TY ++ YC+ E +F E M
Sbjct: 572 TYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENM 631
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+ KG YSS++ G + DA L+ +M+ +G PNV Y +L+ + + +
Sbjct: 632 KSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQM 691
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
E W EM + P+K +YT +I Y + + + + +G V D ++
Sbjct: 692 DTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVL 751
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
F K + ++ K+ M +EG +DE Y + ++ + Q
Sbjct: 752 TNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGWNPPTITGQ 798
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/488 (18%), Positives = 204/488 (41%), Gaps = 15/488 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYN--VLPDAHTCSRLVASCVRARKFKIAN 172
P T + LV++ +++ E F++ + PD + + ++ + + K + A
Sbjct: 184 PSLKTCNFXLSSLVKANEFEKCC---EVFRVMSEGACPDVFSFTNVINALCKGGKMENA- 239
Query: 173 TLLQVFITDGEIAL----LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
+++F+ ++ + + +N + G + + + EKM G+ + Y ++
Sbjct: 240 --IELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALI 297
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
K+ +KV + E + + ++ L D K G ALK M K
Sbjct: 298 NGLIKLNFFDKVNHILDEMIGAGFNP---NVVVFNNLIDGYCKMGNIEGALKIKDVMISK 354
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
I SL+ F +++ AE +E G+ P+ C +V ++
Sbjct: 355 NITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSA 414
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+ M + + SD + +V G K + A +++ +L+ +G +VT ++I+
Sbjct: 415 FRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHG 474
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
C +A ++ EM ++G + Y++++ + G++ L +M +G +P+
Sbjct: 475 LCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPD 534
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
++ YN L+ L KLW E + + + +Y ++ Y +A + +N
Sbjct: 535 IYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFN 594
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E ++ + I++ + + ++LL++MKS+G + Y S ++ + + G
Sbjct: 595 ELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIG 654
Query: 589 LQMQAQWL 596
L A+ L
Sbjct: 655 LVEDAKHL 662
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/428 (19%), Positives = 176/428 (41%), Gaps = 42/428 (9%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
++ S G D + ++ A K G E LF+ K KL +P + Y + + L
Sbjct: 210 RVMSEGACPDVFSFTNVINALCKGGKMENAIELFM--KMEKLGISP-NVVTYNCIINGLC 266
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
++GR A + M KG+ + Y +LI + + E G +
Sbjct: 267 QNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVV 326
Query: 331 VCLKLVLMYIEEGLVEKTL----------------------------DVVESMKNAKLKI 362
V L+ Y + G +E L D +E +NA +I
Sbjct: 327 VFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEI 386
Query: 363 ---------SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+C S +V+ K+ Y +A + + ++S+ P + ++ C+
Sbjct: 387 LSSGLSIHPDNCYS--VVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDG 444
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ +A +++ + +KG V ++++ G++ +A +V +M +G + YN
Sbjct: 445 KHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYN 504
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+L+ + +L +EM +R + PD +Y ++ + D +K ++EF+ +
Sbjct: 505 ALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKAS 564
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G + + GIM+ + K ++IE++ L ++ S+ +L+ +Y+ + A G A
Sbjct: 565 GLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAA 624
Query: 594 QWLQQNFE 601
L +N +
Sbjct: 625 LQLLENMK 632
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/445 (19%), Positives = 197/445 (44%), Gaps = 4/445 (0%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTI 206
V P+ + L+ R ++ + A + + +++ +N+ + GY K+ +
Sbjct: 207 VRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAF 266
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
+ E+MK + + + ++ K+ ++ +L K +++ + Y IL
Sbjct: 267 KMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLL---KEMEVNGFMPDGYTYSILF 323
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
D L + A++ + EKGI + + L+ +V+ AEE+ K+ E G++
Sbjct: 324 DGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLV 383
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D + V Y G + K + +E M++ L+ + ++++ F + A +
Sbjct: 384 ADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEW 443
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+++ +G P TY ++I+ Y ++ + + ++ +M++ G VV+Y S++ K
Sbjct: 444 VKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCK 503
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G+I +A ++ M +G PN +YN L+D ++ + + EM R +++P V+
Sbjct: 504 DGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVT 563
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y +I + + F + +G D ++ ++ + + + L + MK
Sbjct: 564 YNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMK 623
Query: 567 SEGTKLDERLYHSAMNALRDAGLQM 591
+ G K R YH ++ G+++
Sbjct: 624 NLGIKPTVRTYHPLISGCSKEGIEL 648
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 199/466 (42%), Gaps = 13/466 (2%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV- 177
T LI + + D+ + E K +V P+ T + L++ + RK K A +LL+
Sbjct: 248 TYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEM 307
Query: 178 ----FITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
F+ DG + F+ G + + +YE+ GI +++ ++ K
Sbjct: 308 EVNGFMPDGYTYSILFD----GLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCK 363
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G EK + + L + +Y + + G +A+ M+ G+ +
Sbjct: 364 QGKVEKAEEILKKFTENGLVADEV---IYNTFVNGYCRIGDMNKAILTIERMESFGLRPN 420
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ SLI F + E+ AEE K+ EKG+ E L+ Y + ++ ++E
Sbjct: 421 SITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILE 480
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M+ +K + +++N K A V +I +G +P Y +I+ C +
Sbjct: 481 QMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVG 540
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
A + F EM + +V Y+ ++ K G++ +A + ++ + G P+V YN
Sbjct: 541 KVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYN 600
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
SL+ + A N+ + L++ M+ + P +Y +IS ++ ++ K YNE
Sbjct: 601 SLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSK-EGIELVEKLYNEMLQM 659
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ DR + M+ ++++ ++ L Q M +G D+ Y+S
Sbjct: 660 NLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNS 705
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/532 (20%), Positives = 218/532 (40%), Gaps = 40/532 (7%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
++ P+ F+S L G+ K + +E A E + + F P+ T +L L++
Sbjct: 274 EKSVAPNIITFNSLLSGLCKMRKMKE-ARSLLKEME-VNGFMPDGYTYSILFDGLLRCDD 331
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNS 191
+ + L E + + +T S L+ + K + A +L+ F +G +A + +N+
Sbjct: 332 GNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNT 391
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ GY ++ IL E+M+S G+ +S + +++ + + + +K + +
Sbjct: 392 FVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKG 451
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
+ TP S Y L D GK + M+E G+ + Y SLI ++
Sbjct: 452 V--TP-SVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKIL 508
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
AE + ++ +G+L + +V L+ G V+ L + M +++ + ++
Sbjct: 509 EAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLI 568
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK-------------- 417
+G K+ A Q+ S G P +TY S+I+ Y SK
Sbjct: 569 DGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIK 628
Query: 418 --------------------AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
EK++ EM Q V Y++M+ Y + G + A L
Sbjct: 629 PTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLH 688
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
M +G P+ YNSL+ H R L ++ L M+ +++ P +Y ++ +
Sbjct: 689 QGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDL 748
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
++F +Y E N + + +I + + +++E+ + +M +G
Sbjct: 749 KDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKG 800
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 104/237 (43%)
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
K +D+ ++N+ + + + K + ++ + + +G P Y +I
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
CR AEK+F EM +V Y++++ Y K G + A + +MK K
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
PN+ +NSL+ + + +++ L KEME PD +Y+ + R + + ++
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
Y + G I+ I++ K ++E+ ++L+ G DE +Y++ +N
Sbjct: 339 YEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNG 395
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 127/333 (38%), Gaps = 70/333 (21%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L D K G A K MKEK + + + SL+ + ++K A L KE E
Sbjct: 249 YNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEME 308
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
G + D + +GL + C NG
Sbjct: 309 VNGFMPD-----GYTYSILFDGL---------------------LRCDDGNG-------- 334
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+++YEQ +G T + ++N C+ KAE++ + + G V Y++ V
Sbjct: 335 -AMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFV 393
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y + G + A+ + +M++ G PN +NSL+D K + + E+ K+M + VT
Sbjct: 394 NGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVT 453
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P +Y T+I Y + FD C + +
Sbjct: 454 PSVETYNTLIDGYGKLCTFDRCFQ-----------------------------------I 478
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
L+ M+ G K + Y S +N L G ++A+
Sbjct: 479 LEQMEEIGVKPNVVSYGSLINCLCKDGKILEAE 511
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/221 (17%), Positives = 92/221 (41%)
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ V ++ ++ + G YA I A ++ + M+++G V Y+
Sbjct: 157 FVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNV 216
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ + RIRDA + +M ++ YN+L+D + + L K+ + M+ +
Sbjct: 217 LIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKS 276
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
V P+ +++ +++S + R+ E +NG + D I+ + +
Sbjct: 277 VAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAM 336
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+L + +G +++ +N L G +A+ + + F
Sbjct: 337 ELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKF 377
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 204/465 (43%), Gaps = 67/465 (14%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ LH M++ + LA YN KL P +T +LI + +S K + +
Sbjct: 159 PDVFTYNTVLHVMVRK-EVVLLALGIYNRMLKL-NCLPNIATFSILIDGMCKSGKTQNAL 216
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
+ ++ +LP+ T + +++ +A+K A+ ++FI
Sbjct: 217 QMFDEMTQRRILPNKITYTIIISGLCQAQK---ADVAYRLFIA----------------- 256
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
MK G + DS Y ++ + K+G ++ L K + D
Sbjct: 257 --------------MKDHGCIPDSVTYNALLHGFCKLGRVDEALGLL---KYFEKDRYVL 299
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
Y L D L ++ R +A ++R M E I D +Y ++ + + K A L
Sbjct: 300 DKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLL 359
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS--DCISCA-----I 370
E E+G++ D L+ Y + GL+++ K+ L+IS DC S A +
Sbjct: 360 NEMTERGLVPDTHCYNALIKGYCDLGLLDEA-------KSLHLEISKNDCFSSACTYTIL 412
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ---- 426
+ G + A +++ ++ GC P VT+ ++I+ +C+ KA+ +F +M+
Sbjct: 413 ICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRN 472
Query: 427 -------QKGFDKCV--VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
+G ++ + + +MV +G I A ++ ++ G PN+ YN L+
Sbjct: 473 PSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIH 532
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA-REFD 521
+A N+ KL+KE++ + ++PD V+Y T+I+ A RE D
Sbjct: 533 GFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREED 577
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 187/453 (41%), Gaps = 65/453 (14%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P+ F + GM K +TQ A ++E + P K T ++I L Q++K D
Sbjct: 193 LPNIATFSILIDGMCKSGKTQN-ALQMFDEMTQ-RRILPNKITYTIIISGLCQAQKADVA 250
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVA------------------------------SCV--- 163
L K + +PD+ T + L+ SC+
Sbjct: 251 YRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDG 310
Query: 164 --RARKFKIANTLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVL 219
RAR+F+ A + +T+ I ++ + M G +K + + + +M G+V
Sbjct: 311 LFRARRFEDAQVWYRK-MTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVP 369
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
D+ CY +++ Y +G ++ +L LE S S Y IL + +SG +A
Sbjct: 370 DTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFS---SACTYTILICGMCRSGLVGDAQ 426
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
+ F +M++ G + +LI F ++ A+ LF + E + R+P + L+L
Sbjct: 427 QIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKME---IGRNPSLFLRL---- 479
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+G + LD S++ ++ C S I+ ++ + QL G P
Sbjct: 480 -SQG-ANRVLDTA-SLQTMVEQL--CDSGLILKAYN----------ILMQLTDSGFAPNI 524
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
+TY +I+ +C+ + A K+F E+Q KG V Y +++ R DA ++ +
Sbjct: 525 ITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQ 584
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+ GC P +Y S M R + LW
Sbjct: 585 ILKNGCTPITEVYKSFMTWSCRRNKITLAFSLW 617
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/456 (20%), Positives = 187/456 (41%), Gaps = 55/456 (12%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
AF + Y K+ M + +E MK D Y ++ + ++V L L
Sbjct: 128 AFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVR----KEVVLLALGI 183
Query: 248 KSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+R KL+ P + + IL D + KSG+ AL+ F +M ++ IL + Y +I
Sbjct: 184 YNRMLKLNCLP-NIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLC 242
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE------------ 353
+ +A LF ++ G + D L+ + + G V++ L +++
Sbjct: 243 QAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQ 302
Query: 354 -----------------------SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
M +K + ++ G SK + A+++ ++
Sbjct: 303 GYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEM 362
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+G +P Y ++I YC + L +A+ + +E+ + Y+ ++ ++G +
Sbjct: 363 TERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLV 422
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME---------RRKVT 501
DA + +M+ GC P+V +N+L+D +A N+ + + L+ +ME R
Sbjct: 423 GDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQG 482
Query: 502 PDKVSYTTVI-SAYNRAREFDMCVKFYN---EFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
++V T + + + + + +K YN + +G + I++ F K I
Sbjct: 483 ANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNING 542
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
KL ++++ +G D Y + +N L A + A
Sbjct: 543 AFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDA 578
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 126/283 (44%)
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
++ KE + G + L+ Y + ++EK ++ E MK+ K +++
Sbjct: 112 QVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVM 171
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
++ A+ +Y +++ C+P T++ +I+ C+ A ++F EM Q+
Sbjct: 172 VRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNK 231
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ Y+ +++ + + A L MK GC P+ YN+L+ + + + L K
Sbjct: 232 ITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKY 291
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
E+ + DK Y+ +I RAR F+ +Y + + D + IM+ SK +
Sbjct: 292 FEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGK 351
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQ 597
++ ++LL +M G D Y++ + D GL +A+ L
Sbjct: 352 FKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLH 394
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 107/215 (49%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
I++ K G+ +V +++ G + +I AY ++ + KA + F M+
Sbjct: 97 IIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFD 156
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
V Y++++ + + + A+ + +M C PN+ ++ L+D ++ +
Sbjct: 157 CKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNAL 216
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+++ EM +R++ P+K++YT +IS +A++ D+ + + + +G + D ++ F
Sbjct: 217 QMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGF 276
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
KL +++E + LL+ + + LD++ Y ++ L
Sbjct: 277 CKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGL 311
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 104/258 (40%), Gaps = 4/258 (1%)
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ G + L + + M ++ + I++G + + A +++ + GCIP V
Sbjct: 208 KSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSV 267
Query: 401 TYASIINAYCRIALYSKAEKV--FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
TY ++++ +C++ +A + + E + DK YS ++ + R DA
Sbjct: 268 TYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDK--QGYSCLIDGLFRARRFEDAQVWYR 325
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
KM +P+V +Y +M +A + +L EM R + PD Y +I Y
Sbjct: 326 KMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLG 385
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
D + E N I++ + + + ++ +M+ G ++
Sbjct: 386 LLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFN 445
Query: 579 SAMNALRDAGLQMQAQWL 596
+ ++ AG +AQ L
Sbjct: 446 ALIDGFCKAGNIEKAQLL 463
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 111/261 (42%), Gaps = 14/261 (5%)
Query: 104 YNEAKKLPE--FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS 161
YN +L + F P T +LI ++ + L ++ ++ + PD+ T L+
Sbjct: 509 YNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLING 568
Query: 162 CVRARKFKIANTLLQVFITDGEIALL----AFNSAMGGYNKLHMYYSTILVYEKMKSAGI 217
+ A + + A T+L + +G + +F + NK+ + +S L Y +
Sbjct: 569 LLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGR- 627
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFE 277
DS + E + K G+ E+ LE + D F Y I L ++GR E
Sbjct: 628 --DSEVLKSVEENFEK-GEVEEAVRGLLEMDFKLND---FQLAPYTIWLIGLCQAGRLEE 681
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
ALK F ++E +L P LI + + LA E+F +KG + P +C +L+
Sbjct: 682 ALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLLK 741
Query: 338 MYIE-EGLVEKTLDVVESMKN 357
+ E + D++ MK+
Sbjct: 742 SLLRSEDKRNRAFDLLSRMKS 762
>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
Length = 864
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 192/442 (43%), Gaps = 7/442 (1%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
Q +P+A + + + G LK + Q+ A D YNE K L + I L + +K
Sbjct: 360 QNIMPNAYIYATLIDGHLKAGK-QDAAVDLYNEMK-LNGLEENSFIVDAFINNLKRGRKM 417
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
+ L + +L D + L+ + + A T+ + G + ++A+N
Sbjct: 418 EEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVL 477
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G +L Y + VY ++ G+ D Y ++ AY K G E L+ E K +
Sbjct: 478 INGLLRLGKYDAES-VYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSV 536
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
+ + IL L K+G A+ +M GI + +I+ +L+ + +
Sbjct: 537 MPNSITCN---ILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADT 593
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
++ K G+ + EV L+ + G+ ++ V+ +M + A+++
Sbjct: 594 ILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIH 653
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G K A+ Y Q++++G PG TY ++ L SKA ++ +M+ G D
Sbjct: 654 GHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDP 713
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
Y+++++ +GK G ++A+ +M KG P YN L++ + + Q +L
Sbjct: 714 DASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELL 773
Query: 493 KEMERRKVTPDKVSYTTVISAY 514
EM+ R+V P+ +Y +I +
Sbjct: 774 NEMQVRRVPPNSSTYDILICGW 795
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/513 (20%), Positives = 221/513 (43%), Gaps = 31/513 (6%)
Query: 102 DYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS 161
D N+ P T LI + +SL E+ LPD T S ++
Sbjct: 141 DDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIING 200
Query: 162 CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTIL-------------V 208
+ A LL+ E+ + G N H+ Y+ ++ +
Sbjct: 201 LCKRGMLTEAKALLR------EMDKM-------GVNPNHVVYAILVDSLFKAGSAWESFI 247
Query: 209 YE-KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
Y+ +M G+ D +++ +K G S++ A+F C KL+ P + Y + D
Sbjct: 248 YQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMF--CTLAKLNCIP-NNITYTAMID 304
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
K G A RDM++K ++ + Y+S+I + + +A + K+ ++ ++
Sbjct: 305 GYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMP 364
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ + L+ +++ G + +D+ MK L+ + I A +N + R A +
Sbjct: 365 NAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLC 424
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ ++S+G + +V Y S+++ + + S A + +M + G VVAY+ ++ +
Sbjct: 425 KYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRL 484
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G+ DA + + ++ G P+ YN++++ + + L KLW EM+ V P+ ++
Sbjct: 485 GKY-DAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITC 543
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
++ ++A E + + NE + G + I ++ SK + + ++++ + +
Sbjct: 544 NILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVG 603
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
G K + +Y+S + L G+ +A + N
Sbjct: 604 MGLKANREVYNSLITVLCGLGMTKRATLVLNNM 636
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 201/462 (43%), Gaps = 23/462 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +I + D V + + N++P+A+ + L+ ++A K A L
Sbjct: 329 PNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDL 388
Query: 175 LQ----------VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
FI D I L M L Y M S G++LD Y
Sbjct: 389 YNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKY---------MMSKGLLLDRVNY 439
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
+M+ ++K G + +A F + F Y +L + L + G+ ++A +
Sbjct: 440 TSLMDGFFKTG---RESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGK-YDAESVYSG 495
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
++E G+ D + Y ++I ++ +++ A +L+ E + ++ + C LV + G
Sbjct: 496 IRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGE 555
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
E+ +DV+ M + + I A++N SK ++++++L+ G + Y S
Sbjct: 556 TERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNS 615
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I C + + +A V M ++G V Y++++ + K+ I A+ +M +G
Sbjct: 616 LITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEG 675
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
P + YN L+ A + + ++ +M+ + PD Y T+IS + + +
Sbjct: 676 VSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAI 735
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
KFY E G V + +++ F+K+ ++++ +LL +M+
Sbjct: 736 KFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQ 777
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 198/486 (40%), Gaps = 26/486 (5%)
Query: 119 TLKLLIRYLVQ-------SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
TL L R + Q S+ WD L + VLP+ T + LV + + +A
Sbjct: 10 TLPLWNRLIYQFNATGLVSQVWD----LYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLA 65
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L++ D ++ + +N+A+ G+ + + M DS +++ +
Sbjct: 66 LDLIRN--VDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGF 123
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHM------YKILCDSLGKSGRAFEALKFFRDM 285
+IG S K ++ ++ +T++ Y L + K EAL + +M
Sbjct: 124 CRIG-SVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEM 182
Query: 286 KEKGILEDPSIYASLI---CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
G L D Y+S+I C +TE A+ L +E ++ G+ + V LV +
Sbjct: 183 ISDGFLPDVVTYSSIINGLCKRGMLTE---AKALLREMDKMGVNPNHVVYAILVDSLFKA 239
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
G ++ M + + +++G K A ++ L CIP +TY
Sbjct: 240 GSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITY 299
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
++I+ YC++ AE + +M++K VV YSS++ Y K G + A+ ++ KM
Sbjct: 300 TAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLD 359
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
+ PN +IY +L+D H +A L+ EM+ + + I+ R R+ +
Sbjct: 360 QNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEE 419
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
G ++DR ++ F K + + + M G K D Y+ +N
Sbjct: 420 AEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLIN 479
Query: 583 ALRDAG 588
L G
Sbjct: 480 GLLRLG 485
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N+ + G+ K+ I Y +M + G+V + Y ++E + K+G ++ L E +
Sbjct: 718 YNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQ 777
Query: 249 SRKLDSTPFSTHMYKILC------------DSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
R++ P ++ Y IL D + K EA F +M EKG + +
Sbjct: 778 VRRV---PPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVPCENT 834
Query: 297 YASLICSFASITEVKLAEELFKE 319
A + +FA V A+ + K+
Sbjct: 835 LACISSTFARPGMVVDAKHMLKD 857
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 183/418 (43%), Gaps = 7/418 (1%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSA-GIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+N + G K + V ++M+ + D Y ++ + K G+ ++ + E
Sbjct: 12 YNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREM 71
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+R D Y + D L + G+ A + R+MK KG+ D +++LI + +
Sbjct: 72 VTR--DGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNA 129
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK---NAKLKISD 364
+V A +L+KE D L+ E + + ++ + M+ + K
Sbjct: 130 RKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDV 189
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
A+++GF K A+K+ + + C+P VTY+S+++ C+ +A +F
Sbjct: 190 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M KG VV Y++++ ++ A L+ +M A C + YN+L+D + R
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV-IDRAIAG 543
+ + ++L+KEM + PD+++YT ++ + A + + G+ D
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
I+V +S+ + E + +Q+M + + Y S ++ L AG A + +N +
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD 427
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 124/572 (21%), Positives = 237/572 (41%), Gaps = 59/572 (10%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
++ PD + + ++G K + + A + E P+ T ++ L + K
Sbjct: 39 KSVAPDLVTYSTVINGFCKQGE-MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKM 97
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG----EIALLAF 189
D + + K+ V PD T S L+ ARK A L + +T ++ A
Sbjct: 98 DRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSAL 157
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
+ + ++ Y E + D Y +++ + K G+ EK + +
Sbjct: 158 ITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEG 217
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---CSFAS 306
RK P + Y L L K+G +AL FR M KG + + Y +LI C+
Sbjct: 218 RK--CVP-NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHK 274
Query: 307 ITEVKL--------------------------------AEELFKEAEEKGMLRDPEVCLK 334
+ +L A++LFKE K L D
Sbjct: 275 VDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTC 334
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV-NGFSKRRGYWAAVKVYEQLISQ 393
LV + +E+ ++E+MK A D ++ +IV G+S+ + + A + +++I++
Sbjct: 335 LVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 394
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC-VVAYSSMVAMYGKTGRIRD 452
P VTY+S+I+ C+ + A +V K DK VV Y+ ++ T R +
Sbjct: 395 NVAPNAVTYSSLIDGLCKAGRVNHAMEVL-----KNVDKPDVVTYTIVIEGLCGTDRTEE 449
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A+ L+ +M K EP+V +NS++ R ++ + KL M + P V+YTT++
Sbjct: 450 ALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLE 509
Query: 513 AYNRAREFDMCVKFYNEFRMNGG--------VIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
++R ++ + + R V ++A + ++ G K +I++ + ++++
Sbjct: 510 GFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRG-LCKAREIDKAMAVVEE 568
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++S + E + ++ L AG +A L
Sbjct: 569 LRSRECEPAEEDCLAIVDGLLRAGRTEEAGKL 600
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQ-KGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P + TY ++N C+ L SKA +V EM+ K +V YS+++ + K G + A
Sbjct: 7 PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66
Query: 456 LVAKMKAK-GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
++ +M + G P+V Y S++D R + + ++ +EM+ + V PDK +++ +I+ +
Sbjct: 67 ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
AR+ D +K Y E + +D + ++ + +I E +L Q+M+
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEME 178
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 136/364 (37%), Gaps = 40/364 (10%)
Query: 70 DSHHQTAVP-DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
D T P D +++ L G + + +E + A K P++ T L+R
Sbjct: 283 DEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAK--SCLPDRITYTCLVRGFC 340
Query: 129 QSKKWDSIVSLSEDFKIY-NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-L 186
+ + + L E+ K + PD T S +VA RA++F A +Q I
Sbjct: 341 NASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNA 400
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ ++S + G K + V + + +V Y ++E +E+ L E
Sbjct: 401 VTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVVT----YTIVIEGLCGTDRTEEALTLLEE 456
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+++++ S + + +L + G EA K M G+ Y +L+ F+
Sbjct: 457 MVNKRVEP---SVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSR 513
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
+++A ELF+ K +S A L
Sbjct: 514 TGRMEIAYELFEVMRRKAK---------------------------KSSSAANLVPEQAF 546
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
S A++ G K R A+ V E+L S+ C P + +I++ R +A K+ +
Sbjct: 547 S-ALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSIS 605
Query: 427 QKGF 430
+ G
Sbjct: 606 KVGL 609
>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 170/372 (45%), Gaps = 40/372 (10%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
P+ HT + ++ RA A L ++ G E+ L +FNS +G Y + ++ +
Sbjct: 8 PNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAWRM 67
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
YE M +GI + D ST L
Sbjct: 68 YEDMVESGI---------------------------------QADEITLST-----LLSG 89
Query: 269 LGKSGRAFE-ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+GK+ E A K F +KE GIL Y +L+ + + +EL E + ++
Sbjct: 90 VGKTQLPVETAEKIFSKIKENGILPRVETYNTLLSVLSRGGHTERCKELEIEMQRLEVVP 149
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ L++M+++ G +++ +V + + +A LK + +V + + + A++V+
Sbjct: 150 NIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPTVVTYTGLVQMYCRASKHKEAIEVF 209
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
++ GC P + Y+ +I+ Y + +A VF ++Q G+ VV + ++ +G
Sbjct: 210 LEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNVVTWCCLIQAFGWQ 269
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++++ +M A GC P++ +YN +M +GR + Q L++ M+ + ++P+ VSY
Sbjct: 270 GKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYGHSVQAAILFRRMQAQGISPNAVSY 329
Query: 508 TTVISAYNRARE 519
T+I AY +++
Sbjct: 330 DTMIQAYCHSKQ 341
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 156/331 (47%), Gaps = 13/331 (3%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
H Y ++ LG++G +A + F +M G+ + S+I ++A K A ++++
Sbjct: 11 HTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAWRMYED 70
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS---- 375
E G+ D E+ L +L V KT VE+ + KI + V ++
Sbjct: 71 MVESGIQAD-EITLSTLL-----SGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLS 124
Query: 376 --KRRGYWAAVKVYE-QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
R G+ K E ++ +P +T+ +++ + + +A +V+ + G
Sbjct: 125 VLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKP 184
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
VV Y+ +V MY + + ++A+ + +M+ GC+P++ IY+ ++ ++G+A + + ++
Sbjct: 185 TVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVF 244
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
++++ P+ V++ +I A+ + F+NE +G + D + +M+G + +
Sbjct: 245 RQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRY 304
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ L + M+++G + Y + + A
Sbjct: 305 GHSVQAAILFRRMQAQGISPNAVSYDTMIQA 335
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 172/383 (44%), Gaps = 6/383 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++E+M + G+ Y ++ +Y + G E L K K+ TP S Y + +
Sbjct: 164 IFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKV--TP-SILTYNTVIN 220
Query: 268 SLGKSGRAFEAL-KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
S + G +E L F +M+ +GI D Y +L+ + A+ AE +F+ E GM+
Sbjct: 221 SCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMV 280
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVK 385
D LV + + +EK ++++ M+++ + D S ++ ++ + A+
Sbjct: 281 PDITTYRNLVETFGKLNKLEKVSELLKEMESSG-NLPDISSYNVLLEAYASKGDIRHAMG 339
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
V+ Q+ C+P VTY+ ++N Y Y ++F+EM+ + V Y+ ++ ++G
Sbjct: 340 VFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFG 399
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+ G ++ + L M + EPN+ Y L+ G+ +K+ M+ + + P
Sbjct: 400 EGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTK 459
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+YT VI AY +A ++ + +N G ++ +F++ +E ++ M
Sbjct: 460 AYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKM 519
Query: 566 KSEGTKLDERLYHSAMNALRDAG 588
G D ++ + R G
Sbjct: 520 GESGVARDRDSFNGVIEGYRQGG 542
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 174/418 (41%), Gaps = 40/418 (9%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
P+ H + +++ R + + + + T G ++ ++ + + Y + Y ++ +
Sbjct: 140 PNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLEL 199
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIG-DSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
E+MK + Y ++ + + G + E + +LF E + + + Y L +
Sbjct: 200 LERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIIT---YNTLLN 256
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ G EA FR M E G++ D + Y +L+ +F + +++ EL KE E G L
Sbjct: 257 ACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLP 316
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK---------------------------- 359
D L+ Y +G + + V M+ A+
Sbjct: 317 DISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELF 376
Query: 360 --LKISDC-----ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+K+S+ ++ F + + V ++ ++ + P TY +I A +
Sbjct: 377 LEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKG 436
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
L+ A+K+ + M +KG AY+ ++ YG+ +A+ + M G +P V Y
Sbjct: 437 GLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETY 496
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
NSL++M R ++ E + +M V D+ S+ VI Y + +F+ +K Y E
Sbjct: 497 NSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVEL 554
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 158/341 (46%), Gaps = 4/341 (1%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS--IYASLICSFASITEVKLAE 314
S + + ++ + G +L+ F+ M+ + I P+ IY +I ++ +
Sbjct: 104 LSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQ-IWCKPNEHIYTIIISLLGREGLLEKST 162
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E+F+E G+ R L+ Y G E +L+++E MK K+ S ++N
Sbjct: 163 EIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSC 222
Query: 375 SKRRGYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
++ W + ++ ++ +G P +TY +++NA L +AE VF M + G
Sbjct: 223 ARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPD 282
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ Y ++V +GK ++ L+ +M++ G P++ YN L++ + ++R +++
Sbjct: 283 ITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFR 342
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
+M+ + P+ V+Y+ +++ Y +D + + E +++ D +++ VF +
Sbjct: 343 QMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGG 402
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+E+V L DM E + + Y + A GL A+
Sbjct: 403 YFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAK 443
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/465 (19%), Positives = 201/465 (43%), Gaps = 9/465 (1%)
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNS 191
W+ ++SL + + + PD T + L+ +C A + + G + + + +
Sbjct: 229 WEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRN 288
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ + KL+ + ++M+S+G + D Y ++EAY GD +F + + +
Sbjct: 289 LVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEAR 348
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
+ Y +L + G GR + + F +MK D Y LI F K
Sbjct: 349 CVPNAVT---YSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFK 405
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKISDCISCA 369
LF + E+ + +P + L+Y + GL E ++ M + S
Sbjct: 406 EVVTLFHDMVEENV--EPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTG 463
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++ + + Y A+ ++ + G P TY S+IN + R LY ++E + +M + G
Sbjct: 464 VIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESG 523
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ +++ ++ Y + G+ +A+ +++ +P+ + +++ ++ A + + E
Sbjct: 524 VARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESE 583
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG-GVIDRAIAGIMVGV 548
+ ++E+ + P + Y +I+ Y R+ +D + +E N I + + +M G
Sbjct: 584 EQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVTNKVSNIHQVVGKMMKGD 643
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ S + + + + SEG L R Y++ + AL G + +A
Sbjct: 644 YDDYSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERA 688
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 4/176 (2%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVS 138
D F+ + G + Q +E A Y E +K F+P++ T + ++ + D
Sbjct: 527 DRDSFNGVIEGYRQGGQFEE-AIKTYVELEK-ARFQPDERTFEAVLSVYCTAGLVDESEE 584
Query: 139 LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD--GEIALLAFNSAMGGY 196
+ + +LP ++A R+ ++ A +L +T+ I + G Y
Sbjct: 585 QFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVTNKVSNIHQVVGKMMKGDY 644
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ + V++K+ S G L Y ++EA + +G E+ A + E R L
Sbjct: 645 DDYSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAARVLSEAIKRGL 700
>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
Length = 584
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 165/334 (49%), Gaps = 6/334 (1%)
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+ P + H + L D+L KS R +A + M++ GI D + +I F ++ A
Sbjct: 90 TPPPNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERA 149
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMK-NAKLKISDCISCAI 370
E+F+E + + P+ L VL+ Y +E +++ L+++ M+ +++ I +I
Sbjct: 150 WEIFQEMIKSNRCQ-PDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSI 208
Query: 371 VNGFSKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
V+G + + A K + E ++ QGC P VTY S+I C+ A +++ M ++
Sbjct: 209 VDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERK 268
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+V+YS ++ K GR+ DA +V +M+ GCE NV IY +L+D ++ L
Sbjct: 269 IQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAY 328
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
L++ M+R P++ +Y T+I + R + + ++ R + +D A+ +V
Sbjct: 329 ALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIR-DYCPLDVAMYTAVVSGL 387
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ ++++ L ++M+ G D Y+ ++
Sbjct: 388 CRERRLDDARALFREMRLAGVSADTHAYNVLLHG 421
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 164/414 (39%), Gaps = 30/414 (7%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+EL RD+ PD F + G K+ + E A++ + E K +P+ +LI
Sbjct: 118 LELMRDAGIH---PDVVTFTVMIRGFCKN-RMMERAWEIFQEMIKSNRCQPDCFLYGVLI 173
Query: 125 RYLVQSKKWDSIVSLSEDFKI-YNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDG 182
+ + D + L + ++ + PD + +V R+ +F A L + + G
Sbjct: 174 DGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQG 233
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
++ + S + G K + ++ M I Y I++ K G +V
Sbjct: 234 CSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAG---RVY 290
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
+ + + + +Y L D L KSG +A +R MK G + YA+LI
Sbjct: 291 DAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLI 350
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLV-EKTLD----VVES 354
+F + A LF +RD C V MY + GL E+ LD +
Sbjct: 351 DTFCRNDRTETALGLFDH------IRD--YCPLDVAMYTAVVSGLCRERRLDDARALFRE 402
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ-GCIPGQVTYASIINAYCRIA 413
M+ A + +++G + A ++ E+L GC+ +TY ++I C
Sbjct: 403 MRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCC--- 459
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+F EM+Q+G YS+++ +G I A L +M A G P
Sbjct: 460 -LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEMLASGLSP 512
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 193/428 (45%), Gaps = 10/428 (2%)
Query: 147 NVLPDAHTCSRLVASCVRARK--FKIANTLL-QVFITDGEIALLAFNSAMGGYNKLHMYY 203
N+ PD +T + L+ + F A ++L +F + + F++ + G +
Sbjct: 5 NIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDSTPFSTHM 261
+ ++++M G D Y I+ K+G + L +E K K + +ST
Sbjct: 65 DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYST-- 122
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ DSL K EA++F +M +GI + Y+S++ F ++ A LFK+
Sbjct: 123 ---IIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMV 179
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E+ ++ D LV +EG++ + V E+M ++ + A+++G+ +
Sbjct: 180 ERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMD 239
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A K++ ++ +GC P +Y +I +C+ +A+ + EM K V YS+++
Sbjct: 240 EAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLM 299
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ + GR +DA L+ +M++ G P++ Y+ ++D + +L + +L K M+ K+
Sbjct: 300 KGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIE 359
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ YT +I + + + ++ + G D +M+ K E +L
Sbjct: 360 PNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACEL 419
Query: 562 LQDMKSEG 569
+DM G
Sbjct: 420 FRDMAVHG 427
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
I+NG K A+++ +++ +GC P V Y++II++ C+ L ++A + EM +
Sbjct: 87 TIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNR 146
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G VV YSS++ + GR +A L +M + P+ +N L+D + + +
Sbjct: 147 GISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEA 206
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+ +++ M + V P+ +Y ++ Y + D K +N G I++
Sbjct: 207 QCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKG 266
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
K +I+E LL +M + D Y + M G AQ L
Sbjct: 267 HCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKL 314
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 104/216 (48%), Gaps = 2/216 (0%)
Query: 370 IVNGF--SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++N F S + A V + G P VT+++++N A A K+F EM +
Sbjct: 16 LINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVK 75
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G++ V+ YS+++ K G A+ L+ KM+ KGC+PNV +Y++++D + K + +
Sbjct: 76 MGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITE 135
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+ EM R ++P+ V+Y++++ + + + + + D I+V
Sbjct: 136 AMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVD 195
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
SK I E + + M +G + + Y++ M+
Sbjct: 196 GLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDG 231
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 41/354 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + S LHG ++ E + ++ P+ T +L+ L +
Sbjct: 150 PNVVTYSSILHGFCNLGRSNEATSLFKQMVER--NVMPDTVTFNILVDGLSKEGMILEAQ 207
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+ E V P+ +T + L+ + A L + + G ++ ++N + G+
Sbjct: 208 CVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGH 267
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K + +M + D+ Y +M+ + + G + L E +S L
Sbjct: 268 CKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDL 327
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y I+ D L K G EA + + M+E I + IY LI + +++ A EL
Sbjct: 328 MT---YSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAAREL 384
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F KG+ P+V V+ IS + G S
Sbjct: 385 FSNLFVKGI--QPDVVTYTVM----------------------------ISGLLKGGLSN 414
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
A +++ + GC+P TY II + R S A ++ EM +GF
Sbjct: 415 E-----ACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGF 463
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/478 (20%), Positives = 214/478 (44%), Gaps = 6/478 (1%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
+I+ L + K+ D S+ + + PD T S ++ +++ A +L+ + G
Sbjct: 251 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 310
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ +NS + GY+ M+ ++ V+++M S G++ + A +K G + +
Sbjct: 311 TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAK 370
Query: 242 ALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
+F + K K D +ST+ + + + F M KGI + ++
Sbjct: 371 CIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWH--NIFNLMLTKGIAPNKHVFNI 428
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
LI ++A + A +F++ + KGM+ D ++ G ++ L M +
Sbjct: 429 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 488
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY-ASIINAYCRIALYSKA 418
+ S+ + ++ G A ++ +++++ P V Y +SIIN C+ ++
Sbjct: 489 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 548
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+ + M Q G VV ++S++ Y G + +A L+ M + G EPN +IY +L+D
Sbjct: 549 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 608
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ + + ++++M + V P V Y+ ++ +AR K ++E +G +
Sbjct: 609 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 668
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
G+++G + + +E LL+ + + K D ++ ++A+ G + +A+ L
Sbjct: 669 IHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKEL 726
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 96/486 (19%), Positives = 192/486 (39%), Gaps = 28/486 (5%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP T LI S W+ V + + V+P C+ + + + + A
Sbjct: 312 RPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKC 371
Query: 174 LLQVFITDG---EIALLAFNSAMGGYNKLHMYYSTIL------VYEKMKSAGIVLDSGCY 224
+ + G +I + N++ Y +Y T++ ++ M + GI + +
Sbjct: 372 IFDSMVLKGPKPDIISYSTNASWVCY-----WYVTVVWVMWHNIFNLMLTKGIAPNKHVF 426
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFF 282
++ AY + G +K +F + +++ + D+ F+T + SL + GR +AL F
Sbjct: 427 NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT-----VISSLCRIGRLDDALHKF 481
Query: 283 RDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK----LVLM 338
M + G+ ++Y LI + E+ A+EL E K + P +K ++
Sbjct: 482 NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDI---PPPGVKYFSSIINN 538
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+EG V + D+++ M + + +++ G+ A + + + S G P
Sbjct: 539 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 598
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
Y ++++ YC+ A VF +M KG V YS ++ + R A +
Sbjct: 599 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 658
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M G ++ Y ++ R + L +++ V D +++ VISA +
Sbjct: 659 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 718
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ ++ G V + +M+ K EE L ++ G D RL +
Sbjct: 719 RRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLN 778
Query: 579 SAMNAL 584
+ L
Sbjct: 779 HIVRML 784
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 110/259 (42%), Gaps = 38/259 (14%)
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
D S +++ GF K A ++ +++ QG +P + SII C++ KAE +
Sbjct: 210 DDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQ 269
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+M G + YS ++ K+ + A ++ +M G PN YNSL+ + +
Sbjct: 270 KMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISG 329
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISA---YNRARE----FD--------------- 521
+ +++K+M V P + + I A + R E FD
Sbjct: 330 MWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYS 389
Query: 522 -----MC--------VKFYNEFRM---NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+C V ++N F + G ++ + I++ +++ +++ + + +DM
Sbjct: 390 TNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM 449
Query: 566 KSEGTKLDERLYHSAMNAL 584
+++G D + + +++L
Sbjct: 450 QNKGMIPDTVTFATVISSL 468
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/508 (20%), Positives = 210/508 (41%), Gaps = 6/508 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD ++S +H + K + + A + + P T LI + +W V
Sbjct: 265 PDLVTYNSVVHALCK-ARAMDKAEAFLRQMVN-KRVLPNNWTYNNLIYGYSSTGQWKEAV 322
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+ ++ + +++LPD T S L+ S + K K A + G+ + ++N + GY
Sbjct: 323 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 382
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+++ M GI D + +++AY G +K +F E + +
Sbjct: 383 ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 442
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y+ + +L + G+ +A++ F M ++G+ D Y LI F + + A+EL
Sbjct: 443 VT---YRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 499
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E GM D ++ + G V ++ + N L + +++G+
Sbjct: 500 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCL 559
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A++V++ ++S G P V Y +++N YC+I + +F EM Q+G +
Sbjct: 560 VGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 619
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
YS ++ + GR A +M G ++ YN ++ + + + L+KE+
Sbjct: 620 YSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELR 679
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
V + ++ T+I + R + + + V + IM+ K +E
Sbjct: 680 AMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVE 739
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNAL 584
E + M++ G + + RL + + L
Sbjct: 740 EAEDMFSSMQNAGCEPNSRLLNHVVREL 767
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 153/335 (45%), Gaps = 2/335 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAEELFKE 319
Y IL SL G++ +A R M E G + P++ Y ++I F +V A +LFKE
Sbjct: 198 YSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKE 257
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
++G+ D +V + ++K + M N ++ ++ ++ G+S
Sbjct: 258 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 317
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ AV+V++++ +P VT + ++ + C+ +A VF M KG + V +Y+
Sbjct: 318 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 377
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
M+ Y G + D L M G P+ + +N L+ + L + ++ EM
Sbjct: 378 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 437
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
V PD V+Y TVI+A R + D ++ +N+ G D+ ++ F + +
Sbjct: 438 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 497
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+L+ ++ + G LD + S +N L G M AQ
Sbjct: 498 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 532
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 147/343 (42%), Gaps = 7/343 (2%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALK-FFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ H+ + C++ R EAL E G + D Y+ L+ S + A++
Sbjct: 161 IANHLLEGFCEA----KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 216
Query: 316 LFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L + E G + P V ++ + +EG V K D+ + M + ++V+
Sbjct: 217 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 276
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
K R A Q++++ +P TY ++I Y + +A +VF EM++
Sbjct: 277 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 336
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VV S ++ K G+I++A + M KG P+V+ YN +++ + L + L+
Sbjct: 337 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 396
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
M + PD ++ +I AY D + +NE R +G D ++ ++
Sbjct: 397 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 456
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++++ ++ M +G D+ Y+ + G ++A+ L
Sbjct: 457 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 499
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/505 (20%), Positives = 224/505 (44%), Gaps = 36/505 (7%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
+F+ + +I L+++ +D +S + + +P+ T L++ ++ ++
Sbjct: 37 DFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWC 96
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG---------IVLDS 221
++ + +T+G FNS + Y Y + +M + G I + S
Sbjct: 97 KRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGS 156
Query: 222 GCYCQIMEAYYKIGDSEKVAALFL--ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
C + + + + +EK+ L C K++ F+ + LC +GK +AF+ +
Sbjct: 157 ICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA----RCLC-GVGKFDKAFQLI 211
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
K +M KG + D S Y+ +I T+V+ A LF+E + G+ D L+ +
Sbjct: 212 K---EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 268
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ GL+E+ + E M++ + A+++ + K + A ++ +++ GC P
Sbjct: 269 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 328
Query: 400 VTYASIINAYCRIALYSKAEKVFIEM----------------QQKGFDKCVVAYSSMVAM 443
VTY ++++ C+ SKA +V+ ++ + VV Y ++V
Sbjct: 329 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 388
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K ++ A L+ M + GCEPN +Y++L+D +A + ++++ +M + P
Sbjct: 389 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 448
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+YT++I + D+ +K ++ + + M+ ++ + E+ +KLL
Sbjct: 449 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLS 508
Query: 564 DMKSEGTKLDERLYHSAMNALRDAG 588
M+ +G + Y + ++ L AG
Sbjct: 509 LMEEKGCSPNVVTYTALIDGLGKAG 533
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 108/502 (21%), Positives = 193/502 (38%), Gaps = 92/502 (18%)
Query: 169 KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
KI +L ++ + F + G K + I ++M G V D+ Y +++
Sbjct: 174 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLI---KEMMRKGFVPDTSTYSKVI 230
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
EK LF E K + TP + Y IL DS K+G +A F +M+
Sbjct: 231 TFLCHATKVEKAFLLFQEMK--MVGVTP-DVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 287
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G Y +LI ++ +V A ++F + G + LV + G + K
Sbjct: 288 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 347
Query: 349 LDVVESMKNAK----------------LKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
+V + L + A+V+G K A ++ + ++S
Sbjct: 348 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 407
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF---------------------- 430
GC P + Y ++I+ +C+ A++VF++M + G+
Sbjct: 408 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 467
Query: 431 ----------DKC---VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
D C VV Y++M+ + G A+ L++ M+ KGC PNV Y +L+D
Sbjct: 468 AMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID 527
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS------AYNRAR------------- 518
G+A + L+ +M R+ +P+ V+Y +I+ ++AR
Sbjct: 528 GLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPK 587
Query: 519 --------------EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
F + E G V + G+++ FSK ++E ++L ++
Sbjct: 588 YLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKE 647
Query: 565 MK--SEGTKLDERLYHSAMNAL 584
M K D +Y S + AL
Sbjct: 648 MMEVPSSVKTDNDMYASLIQAL 669
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/512 (20%), Positives = 204/512 (39%), Gaps = 57/512 (11%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ ST +I +L + K + L ++ K+ V PD +T + L+ S +A + A
Sbjct: 219 FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQ 278
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L + + G ++ + + + Y K ++ +M AG + Y +++
Sbjct: 279 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 338
Query: 232 YKIGDSEKV---------------AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
K G+ K + + C+ R + T Y L D L K+ +
Sbjct: 339 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT--YGALVDGLCKAHKVD 396
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG------------ 324
A + M G + +Y +LI F ++ A+E+F + + G
Sbjct: 397 HAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 456
Query: 325 --MLRDPEV--------------CLKLVLMYIE--EGLV-----EKTLDVVESMKNAKLK 361
M +D + C V+ Y +GL EK L ++ M+
Sbjct: 457 DRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS 516
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ A+++G K ++ ++ Q+ +GC P VTY +IN C L KA +
Sbjct: 517 PNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 576
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
EM+Q + K + Y + + K+ ++ ++ +M++ G P +Y L+D +
Sbjct: 577 LGEMKQTYWPKYLQGYRCAIQGFSKS--FIASLGILEEMESYGTVPIAPVYGMLIDCFSK 634
Query: 482 AKNLRQVEKLWKEMER--RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
A L +L KEM V D Y ++I A A + + + Y+E G V +
Sbjct: 635 AGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPEL 694
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
++ ++ ++ + +E ++L + EG
Sbjct: 695 SVFVCLIKGLVEVKKWDEALQLCYGICHEGVN 726
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 108/262 (41%), Gaps = 9/262 (3%)
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+EG LD++E K+ + +++G + + A+ ++ CIP V
Sbjct: 22 KEGRWADALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVV 78
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TY ++++ + + +++ M +G + ++S+V Y A L+ +M
Sbjct: 79 TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 138
Query: 461 KAKGCEPNVWIYNSLM-DMHGRAK-----NLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
GC P +YN + + G+ K L EK++ EM +KV+
Sbjct: 139 TTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCL 198
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+FD + E G V D + ++ +++E+ L Q+MK G D
Sbjct: 199 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 258
Query: 575 RLYHSAMNALRDAGLQMQAQWL 596
Y +++ AGL QAQWL
Sbjct: 259 YTYTILIDSFCKAGLIEQAQWL 280
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 115/282 (40%), Gaps = 24/282 (8%)
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC--------AIVNGFSKRRG 379
D +C ++ +E ++ + + M+ C SC +++GF K++
Sbjct: 41 DTVLCTHMISGLMEASYFDEAMSFLHRMR--------CNSCIPNVVTYRTLLSGFLKKKQ 92
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
++ ++++GC P + S++++YC Y+ A K+ M G V Y+
Sbjct: 93 LGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 152
Query: 440 MVAMYGKTGRIRD------AMWLVAKMKAKGCEPN-VWIYNSLMDMHGRAKNLRQVEKLW 492
+ ++ A + +M A C N V + N + G K + +L
Sbjct: 153 FIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK-FDKAFQLI 211
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
KEM R+ PD +Y+ VI+ A + + + E +M G D I++ F K
Sbjct: 212 KEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKA 271
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
IE+ L ++M+S G Y + ++A A QA
Sbjct: 272 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAN 313
>gi|26452823|dbj|BAC43491.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 702
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 164/354 (46%), Gaps = 9/354 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y M+ + K D EK LF E R K D+ F+T + ++G A+++
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTT-----IISCARQNGVPKRAVEW 232
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
F M G D A++I ++ V +A L+ A + D L+ +Y
Sbjct: 233 FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGV 292
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G + L++ E MK +K + I +++ + + W A +Y+ LI+ G P T
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWST 352
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
YA+++ AY R A ++ EM++KG V+ Y+++++M G + +A + MK
Sbjct: 353 YAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADIGYVDEAFEIFQDMK 412
Query: 462 -AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ C+P+ W ++SL+ ++ + + + E +M P T+VI Y +A++
Sbjct: 413 NCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQV 472
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
D V+ +++ G D G ++ V ++ + EE+ KL+ ++ KL +
Sbjct: 473 DDVVRTFDQVLELGITPDDRFCGCLLNVMTQ-TPSEEIGKLIGCVEKAKPKLGQ 525
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 117/253 (46%), Gaps = 38/253 (15%)
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+++E+MK ++ I ++ + F K + + K++++++ +G P T+ +II+
Sbjct: 164 NLLETMKPSREVILYNVTMKV---FRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCA 220
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG----------RIRDAMWLV-- 457
+ + +A + F +M G + V ++M+ YG+ G R R W +
Sbjct: 221 RQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDA 280
Query: 458 -----------------------AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+MKA G +PN+ IYN L+D GRAK Q + ++K+
Sbjct: 281 VTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKD 340
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+ TP+ +Y ++ AY RAR D + Y E + G + + ++ + + +
Sbjct: 341 LITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADIGY 400
Query: 555 IEELVKLLQDMKS 567
++E ++ QDMK+
Sbjct: 401 VDEAFEIFQDMKN 413
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 120/292 (41%), Gaps = 66/292 (22%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK--LDSTPFSTH------ 260
+EKM S G D+ +++AY + G+ + +L+ ++ K +D+ FST
Sbjct: 233 FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGV 292
Query: 261 ------------------------MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+Y L DS+G++ R ++A ++D+ G + S
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWST 352
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
YA+L+ ++ A +++E +EKG+ + L+ M + G V++ ++ + MK
Sbjct: 353 YAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADIGYVDEAFEIFQDMK 412
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
N + C P T++S+I Y S
Sbjct: 413 NC----------------------------------ETCDPDSWTFSSLITVYACSGRVS 438
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+AE ++M++ GF+ + +S++ YGK ++ D + ++ G P+
Sbjct: 439 EAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 10/239 (4%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A Y+ A+ ++R + T LIR S +D +++ E+ K V P+ +R
Sbjct: 262 DMALSLYDRART-EKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 320
Query: 158 LVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM-GGYNKLHMYYSTILVYEKMKSAG 216
L+ S RA++ A + + IT+G + +A+ Y + + +Y +MK G
Sbjct: 321 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLE---CKSRKLDSTPFSTHMYKILCDSLGKSG 273
+ L Y ++ IG ++ +F + C++ DS FS+ + C SG
Sbjct: 381 LSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYAC-----SG 435
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
R EA M+E G + S+I + +V F + E G+ D C
Sbjct: 436 RVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFC 494
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 35/167 (20%)
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS---------------- 512
V +YN M + ++K+L + EKL+ EM R + PD ++TT+IS
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234
Query: 513 -------------------AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
AY RA DM + Y+ R ID ++ ++
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ + + ++MK+ G K + +Y+ ++++ A QA+ + ++
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 171/382 (44%), Gaps = 28/382 (7%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI----------------ALLAFNSAM 193
P+A+T + A + ++ N L++ F+ GE+ ++ FN+ +
Sbjct: 168 PEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLI 227
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G + + +Y++M G+ D Y +++ + + G E +F E + ++
Sbjct: 228 SGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVN 287
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+ ++ L D+ K G + ++DM+ +G++ D Y +L+ +K A
Sbjct: 288 P---NAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAA 344
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
E + +E + G+ D L+ ++G ++ +D+ + M ++ + + A+++G
Sbjct: 345 ESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISG 404
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
SK A +V +++ P TY +I+A+CR K+ EMQ KG
Sbjct: 405 LSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPG 464
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD---MHGRAKNLRQVEK 490
VV Y+ ++ K G++++A L+ M G P+ YN L+D HG+ N ++E
Sbjct: 465 VVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELE- 523
Query: 491 LWKEMERRKVTPDKVSYTTVIS 512
+ + PD YT++IS
Sbjct: 524 -----SSKGMVPDFAVYTSLIS 540
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 105/214 (49%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++G + R A +Y+++ G P TY ++I +CR A K+F EM+ G
Sbjct: 226 LISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTG 285
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ V +++++ + K G + M L M+ +G P++ YN+L++ RA+NL+ E
Sbjct: 286 VNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAE 345
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+ +EM+ + PDKV+YTT+I + + DM + + +D ++
Sbjct: 346 SIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGL 405
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
SK + + ++L++M + D Y ++A
Sbjct: 406 SKAGRPVDAERVLREMMEAALEPDNTTYTMVIDA 439
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 135/320 (42%), Gaps = 1/320 (0%)
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
T ++ +L + G A K F +M+ + + + +LI ++ + L+K
Sbjct: 186 TRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRARDLDAVDGLYK 244
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E + G+ D L+ + G +E + + M++ + + + +++ K
Sbjct: 245 EMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEG 304
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A + +Y+ + +G +P V Y +++N CR AE + EM+ G V Y+
Sbjct: 305 NVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYT 364
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ K G++ AM + KM K + Y +L+ +A E++ +EM
Sbjct: 365 TLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEA 424
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ PD +YT VI A+ R + K E + G +++ KL Q++
Sbjct: 425 ALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNA 484
Query: 559 VKLLQDMKSEGTKLDERLYH 578
LL M + G D+ Y+
Sbjct: 485 DMLLHAMLNIGVSPDDITYN 504
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 103/213 (48%), Gaps = 1/213 (0%)
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+A KV++++ + P VT+ ++I+ CR + ++ EM G V Y +++
Sbjct: 204 SARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALI 262
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ +TGR+ +A+ + +M+ G PN ++ +L+D H + N+ L+++M R V
Sbjct: 263 KGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVM 322
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD V+Y +++ RAR E + G D+ ++ K +++ + +
Sbjct: 323 PDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDI 382
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
Q M + LDE Y + ++ L AG + A+
Sbjct: 383 KQKMAEKEVSLDEVTYTALISGLSKAGRPVDAE 415
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 130/332 (39%), Gaps = 46/332 (13%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + + G + + E A +NE + P LI + ++ +
Sbjct: 253 PDVYTYGALIKGFCRTGR-MENAVKMFNEMRDT-GVNPNAVVFTTLIDAHCKEGNVNAGM 310
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
L +D ++ V+PD + LV RAR K A +++
Sbjct: 311 DLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIV---------------------- 348
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
E+MK+AG+ D Y +++ K G + + + +++
Sbjct: 349 ------------EEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVS---L 393
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
Y L L K+GR +A + R+M E + D + Y +I +F +VK +L
Sbjct: 394 DEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLL 453
Query: 318 KEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
KE + KG + P V V+M + G ++ ++ +M N + D +++G
Sbjct: 454 KEMQNKG--KKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQC 511
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
K G A + E S+G +P Y S+I+
Sbjct: 512 K-HGKVANSEELES--SKGMVPDFAVYTSLIS 540
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 194/453 (42%), Gaps = 10/453 (2%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALL----AFNSAMGGYNKLHMYYST 205
P+A + + ++A RA + A ++VF E A+L +N+ + G+ K +
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDA---VEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 117
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ ++M G+ ++ Y ++ + G + +AL E S+K+ F+ Y IL
Sbjct: 118 FRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFT---YSIL 174
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
D L ++G + L F + G+ + L+ +V +AEE+ + G+
Sbjct: 175 FDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGL 234
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ + L+ Y + G +E MK+ +K A++NG K A
Sbjct: 235 VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 294
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+ ++ G P T+ ++I+AY R K V EMQ+ G VV+Y S+V +
Sbjct: 295 LLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 354
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K G+I +A+ ++ M K PN +YN+++D + Q L ++M+ ++P V
Sbjct: 355 KNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIV 414
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y +I + + N + + D ++ I++ + L Q M
Sbjct: 415 TYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 474
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
G K R YH ++ L AG + ++L Q
Sbjct: 475 HKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQ 507
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/470 (19%), Positives = 181/470 (38%), Gaps = 33/470 (7%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + ++I + ++ + V + ++ VLP+ T + ++ ++ + L
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ G + + +N + G + T + ++M S +V D Y + + +
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180
Query: 234 IGDSEKVAALFLE--------------------CKSRKL-----------DSTPFSTH-M 261
GDS+ + +LF + CK K+ ++ T +
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L + ++G A F MK + I D Y +LI + A++L E +
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ G+ E L+ Y G +EK V+ M+ LK + +IVN F K
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 360
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
AV + + + + +P Y +II+AY +A + +M+ G +V Y+ ++
Sbjct: 361 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 420
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+I +A ++ + P+ YN+L+ N+ + L + M + +
Sbjct: 421 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 480
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+Y +IS A + Y + N V AI IMV +SK
Sbjct: 481 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 530
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 208/463 (44%), Gaps = 14/463 (3%)
Query: 114 RPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
RP T ++ LV +K + +++SL + F+ + PD T S L+ +A
Sbjct: 52 RPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLA 111
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
++ + G + N+ + G + ++++ + G LD Y ++
Sbjct: 112 FSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLING 171
Query: 231 YYKIGDSEKVAALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
K G+++ VA L LE S K D MY + +SL K+ +A + +M K
Sbjct: 172 LCKTGETKAVARLLRKLEGHSVKPDVV-----MYNTIINSLCKNKLLGDACDVYSEMIVK 226
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVE 346
GI D Y +LI F + +K A L E + K + +P VC +L+ +EG ++
Sbjct: 227 GISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNI--NPNVCTFNILIDALSKEGKMK 284
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ ++ M A +K ++++G+ A V+ + +G P Y ++I
Sbjct: 285 EAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMI 344
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
N C+ + +A +F EM+ K +V Y+S++ K + A+ L +MK +G +
Sbjct: 345 NGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQ 404
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+V+ Y L+D ++ L +++++ + + + +YT +I+ +A FD +
Sbjct: 405 PDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDL 464
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
++ G + D I++ + + ++ K+L++M + G
Sbjct: 465 KSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARG 507
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 110/230 (47%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
I+N K + A VY ++I +G P VTY ++I+ +C + +A + EM+ K
Sbjct: 202 TIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLK 261
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
+ V ++ ++ K G++++A L+A M +P+V+ YNSL+D + ++
Sbjct: 262 NINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHA 321
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+ ++ M +R VTPD YT +I+ + + D + + E + + D ++
Sbjct: 322 KYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDG 381
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
K +E + L + MK +G + D Y ++ L +G A+ + Q
Sbjct: 382 LCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQ 431
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 104/227 (45%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
I++ + Y + +++Q G P T + +IN +C A + A VF + ++G
Sbjct: 63 ILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRG 122
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
F + ++++ G I+ A++ ++ A+G + + Y +L++ + + V
Sbjct: 123 FHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVA 182
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+L +++E V PD V Y T+I++ + + Y+E + G D ++ F
Sbjct: 183 RLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGF 242
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ ++E LL +MK + + ++ ++AL G +A+ L
Sbjct: 243 CIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKIL 289
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%)
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
C ++N F + A V+ ++ +G P +T ++I C KA +
Sbjct: 93 CTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQ 152
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+ +GF V+Y +++ KTG + L+ K++ +P+V +YN++++ + K
Sbjct: 153 LVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKL 212
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
L ++ EM + ++PD V+YTT+I + NE ++ + I
Sbjct: 213 LGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNI 272
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++ SK +++E LL M K D Y+S ++
Sbjct: 273 LIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDG 311
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 137/356 (38%), Gaps = 41/356 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ ++ + K+ + A D Y+E + P+ T LI
Sbjct: 195 PDVVMYNTIINSLCKNKLLGD-ACDVYSEMI-VKGISPDVVTYTTLIHGFCIMGHLKEAF 252
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
SL + K+ N+ P+ T + L+ + + K K A LL V + + + +NS + GY
Sbjct: 253 SLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGY 312
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ V+ M G+ D CY ++ K ++ +LF E K + +
Sbjct: 313 FLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDI 372
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y L D L K+ A+ + MKE+GI D Y L+ ++ A+E+
Sbjct: 373 VT---YNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEI 429
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F+ KG + L+ + G ++ LD+ M++
Sbjct: 430 FQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMED------------------- 470
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
+GC+P VT+ II A KAEK+ EM +G K
Sbjct: 471 ----------------KGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLLK 510
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 39/251 (15%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD ++S + G + + Y +Y+ A++ P+ +I L ++K D +
Sbjct: 300 PDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQR--GVTPDVQCYTNMINGLCKTKMVDEAM 357
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
SL E+ K N++PD ++ +NS + G
Sbjct: 358 SLFEEMKHKNMIPD----------------------------------IVTYNSLIDGLC 383
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
K H I + ++MK GI D Y +++ K G E +F ++
Sbjct: 384 KNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYH---L 440
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ H Y +L + L K+G EAL M++KG + D + +I + E AE++
Sbjct: 441 NVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKIL 500
Query: 318 KEAEEKGMLRD 328
+E +G+L++
Sbjct: 501 REMIARGLLKE 511
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/502 (20%), Positives = 221/502 (44%), Gaps = 48/502 (9%)
Query: 101 YDYYNEAKKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRL 158
+D N +++ + RP S + L+ +V+ KK+D ++SL + ++ + D +T + +
Sbjct: 67 HDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 159 VASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGI 217
+ + +A ++L + G E + S + G+ + + + + +KM G
Sbjct: 127 INCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFE 277
D Y I+++ K F E + + + Y L + L SGR +
Sbjct: 187 RPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVT---YTALVNGLCNSGRWND 243
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
A + RDM ++ I + Y++L+ +F +V A+E+F+E +V
Sbjct: 244 AARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEE---------------MVR 288
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
M I+ +V + +++NG A ++++ ++S+GC P
Sbjct: 289 MSIDPDIVTYS--------------------SLINGLCLHDRIDEANQMFDLMVSKGCFP 328
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
V+Y ++IN +C+ K+F +M Q+G V Y++++ + + G + A
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFF 388
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
++M + G P++W YN L+ L + ++++M++ ++ D V+YTTVI +
Sbjct: 389 SQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKT 448
Query: 518 REFDMCVKFYNEFRMNGGVIDRAI-AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ + + + G D +M G+ +K Q E+ L MK EG +
Sbjct: 449 GKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQ-HEVEALYTKMKQEGL-----M 502
Query: 577 YHSAMNALRDAGLQMQAQWLQQ 598
+ +M L D + + A+ +++
Sbjct: 503 KNDSMLCLGDGDITISAELIKK 524
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/398 (20%), Positives = 168/398 (42%), Gaps = 57/398 (14%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ + + K + + A D++ E + RP T L+ L S +W+
Sbjct: 188 PDIVAYNAIIDSLCKTRRVND-ALDFFKEIGR-KGIRPNVVTYTALVNGLCNSGRWNDAA 245
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
L D + P+ T S L+ + V+ K A + + E+ ++ + + Y+
Sbjct: 246 RLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFE------EMVRMSIDPDIVTYS 299
Query: 198 KLHMYYSTILVYEKMKSAGIVLD----SGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
L + + +++++ A + D GC+ ++
Sbjct: 300 SL---INGLCLHDRIDEANQMFDLMVSKGCFPDVVS------------------------ 332
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
Y L + K+ R + +K FR M ++G++ + Y +LI F + +V A
Sbjct: 333 --------YNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKA 384
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
+E F + + G+ P++ +L+ + GL+EK L + E M+ +++ + ++
Sbjct: 385 QEFFSQMDSFGV--SPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVI 442
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
G K A ++ L +G P VTY ++++ C L + E ++ +M+Q+G
Sbjct: 443 QGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLM 502
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
K SM+ + G I + L+ KM + G P++
Sbjct: 503 K----NDSMLCL--GDGDITISAELIKKMLSCGYAPSL 534
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/505 (20%), Positives = 224/505 (44%), Gaps = 36/505 (7%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
+F+ + +I L+++ +D +S + + +P+ T L++ ++ ++
Sbjct: 102 DFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWC 161
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG---------IVLDS 221
++ + +T+G FNS + Y Y + +M + G I + S
Sbjct: 162 KRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGS 221
Query: 222 GCYCQIMEAYYKIGDSEKVAALFL--ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
C + + + + +EK+ L C K++ F+ + LC +GK +AF+ +
Sbjct: 222 ICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA----RCLC-GVGKFDKAFQLI 276
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
K +M KG + D S Y+ +I T+V+ A LF+E + G+ D L+ +
Sbjct: 277 K---EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 333
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ GL+E+ + E M++ + A+++ + K + A ++ +++ GC P
Sbjct: 334 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 393
Query: 400 VTYASIINAYCRIALYSKAEKVFIEM----------------QQKGFDKCVVAYSSMVAM 443
VTY ++++ C+ SKA +V+ ++ + VV Y ++V
Sbjct: 394 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 453
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K ++ A L+ M + GCEPN +Y++L+D +A + ++++ +M + P
Sbjct: 454 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 513
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+YT++I + D+ +K ++ + + M+ ++ + E+ +KLL
Sbjct: 514 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLS 573
Query: 564 DMKSEGTKLDERLYHSAMNALRDAG 588
M+ +G + Y + ++ L AG
Sbjct: 574 LMEEKGCSPNVVTYTALIDGLGKAG 598
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 108/502 (21%), Positives = 193/502 (38%), Gaps = 92/502 (18%)
Query: 169 KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
KI +L ++ + F + G K + I ++M G V D+ Y +++
Sbjct: 239 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLI---KEMMRKGFVPDTSTYSKVI 295
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
EK LF E K + TP + Y IL DS K+G +A F +M+
Sbjct: 296 TFLCHATKVEKAFLLFQEMK--MVGVTP-DVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G Y +LI ++ +V A ++F + G + LV + G + K
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412
Query: 349 LDVVESMKNAK----------------LKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
+V + L + A+V+G K A ++ + ++S
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF---------------------- 430
GC P + Y ++I+ +C+ A++VF++M + G+
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 532
Query: 431 ----------DKC---VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
D C VV Y++M+ + G A+ L++ M+ KGC PNV Y +L+D
Sbjct: 533 AMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID 592
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS------AYNRAR------------- 518
G+A + L+ +M R+ +P+ V+Y +I+ ++AR
Sbjct: 593 GLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPK 652
Query: 519 --------------EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
F + E G V + G+++ FSK ++E ++L ++
Sbjct: 653 YLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKE 712
Query: 565 MK--SEGTKLDERLYHSAMNAL 584
M K D +Y S + AL
Sbjct: 713 MMEVPSSVKTDNDMYASLIQAL 734
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/511 (20%), Positives = 204/511 (39%), Gaps = 57/511 (11%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ ST +I +L + K + L ++ K+ V PD +T + L+ S +A + A
Sbjct: 284 FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQ 343
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L + + G ++ + + + Y K ++ +M AG + Y +++
Sbjct: 344 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 403
Query: 232 YKIGDSEKV---------------AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
K G+ K + + C+ R + T Y L D L K+ +
Sbjct: 404 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT--YGALVDGLCKAHKVD 461
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG------------ 324
A + M G + +Y +LI F ++ A+E+F + + G
Sbjct: 462 HAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 521
Query: 325 --MLRDPEV--------------CLKLVLMYIE--EGLV-----EKTLDVVESMKNAKLK 361
M +D + C V+ Y +GL EK L ++ M+
Sbjct: 522 DRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS 581
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ A+++G K ++ ++ Q+ +GC P VTY +IN C L KA +
Sbjct: 582 PNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 641
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
EM+Q + K + Y + + K+ ++ ++ +M++ G P +Y L+D +
Sbjct: 642 LGEMKQTYWPKYLQGYRCAIQGFSKS--FIASLGILEEMESYGTVPIAPVYGMLIDCFSK 699
Query: 482 AKNLRQVEKLWKEMER--RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
A L +L KEM V D Y ++I A A + + + Y+E G V +
Sbjct: 700 AGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPEL 759
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
++ ++ ++ + +E ++L + EG
Sbjct: 760 SVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 127/318 (39%), Gaps = 9/318 (2%)
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
+K+ G Y +L+ +S +V L + KE E G D +EG
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
LD++E K+ + +++G + + A+ ++ CIP VTY +
Sbjct: 91 WADALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+++ + + +++ M +G + ++S+V Y A L+ +M G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207
Query: 465 CEPNVWIYNSLM-DMHGRAK-----NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
C P +YN + + G+ K L EK++ EM +KV+
Sbjct: 208 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+FD + E G V D + ++ +++E+ L Q+MK G D Y
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327
Query: 579 SAMNALRDAGLQMQAQWL 596
+++ AGL QAQWL
Sbjct: 328 ILIDSFCKAGLIEQAQWL 345
>gi|302754736|ref|XP_002960792.1| hypothetical protein SELMODRAFT_402152 [Selaginella moellendorffii]
gi|300171731|gb|EFJ38331.1| hypothetical protein SELMODRAFT_402152 [Selaginella moellendorffii]
Length = 400
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 156/330 (47%), Gaps = 9/330 (2%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L D K G E L +M E G D YA LI S+A + + A E+F+
Sbjct: 66 YHTLLDGCCKFGSPDELLAVISEMDECGAPPDARAYAFLIASYAKASMLDKASEIFQTLR 125
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG-Y 380
K + V LV +Y + + + +++M+ + K DCIS +V +R G Y
Sbjct: 126 RKNAGIESSVYSSLVWLYCQADRPKDAEEFLKAMEEDR-KDEDCISYNVVISAYQRMGCY 184
Query: 381 WAAVKVYEQLISQGCIP--GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A ++++ + + G+ TY I++ Y + + + +K+F EM
Sbjct: 185 SDATRIFQDMKKKKKKETLGRSTYKLILDVYLKASDHDSFDKLFKEMLGSKVSGEASTLE 244
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+ V +Y ++DA WL + G V YN L+++ A N V+++++EM R
Sbjct: 245 AAVNLYASRDSVKDAEWLYENLAPSGSRLTVLGYNKLLELFLAAGNTAMVDRIYREMP-R 303
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNE-FRMNGGV---IDRAIAGIMVGVFSKLSQ 554
V+PD+ + V++A+ RA+ F V+ + E R +GGV +D ++V + K+ +
Sbjct: 304 VVSPDQTTRRLVMTAFLRAQSFRGAVELHEEILRESGGVQPLLDLQSFALLVRAYVKMER 363
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
E +KL+ M+ G K+DE +Y + +
Sbjct: 364 YFEAMKLVVLMRKAGMKVDEEIYEKVVTGM 393
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 2/210 (0%)
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
QG P Y ++++ C+ + V EM + G AY+ ++A Y K +
Sbjct: 57 QGAKPEFSCYHTLLDGCCKFGSPDELLAVISEMDECGAPPDARAYAFLIASYAKASMLDK 116
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A + ++ K +Y+SL+ ++ +A + E+ K ME + D +SY VIS
Sbjct: 117 ASEIFQTLRRKNAGIESSVYSSLVWLYCQADRPKDAEEFLKAMEEDRKDEDCISYNVVIS 176
Query: 513 AYNRAREFDMCVKFYNEFRMNGG--VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
AY R + + + + + + R+ +++ V+ K S + KL ++M
Sbjct: 177 AYQRMGCYSDATRIFQDMKKKKKKETLGRSTYKLILDVYLKASDHDSFDKLFKEMLGSKV 236
Query: 571 KLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ +A+N A+WL +N
Sbjct: 237 SGEASTLEAAVNLYASRDSVKDAEWLYENL 266
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/156 (18%), Positives = 75/156 (48%)
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
CV +++++ + + +A L+A+ K +G +P Y++L+D + + ++ +
Sbjct: 27 CVANSAALISFCHRVEDLDEARQLLARSKEQGAKPEFSCYHTLLDGCCKFGSPDELLAVI 86
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
EM+ PD +Y +I++Y +A D + + R I+ ++ +V ++ +
Sbjct: 87 SEMDECGAPPDARAYAFLIASYAKASMLDKASEIFQTLRRKNAGIESSVYSSLVWLYCQA 146
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ ++ + L+ M+ + D Y+ ++A + G
Sbjct: 147 DRPKDAEEFLKAMEEDRKDEDCISYNVVISAYQRMG 182
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/491 (19%), Positives = 216/491 (43%), Gaps = 36/491 (7%)
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQTQELA--YDYYNEAKKLPEFRPEKSTLKLLIRYL 127
D HQ P+ F + ++G+ ++ + E D E +P + T ++ +
Sbjct: 169 DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDG----LQPNQITYGTIVDGM 224
Query: 128 VQSKKWDSIVSLSEDFK-IYNVLPDA-------HTCSRLVASCVRARKFKIANTLLQVFI 179
+ S ++L + + ++ P+ TC ++ + ++ A LLQ +
Sbjct: 225 CKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTC--MINGFCSSGRWSEAQQLLQEML 282
Query: 180 TDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
+I+ ++ +N+ + + K ++ +Y++M GI+ + Y +++ + K
Sbjct: 283 ERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRL 342
Query: 238 EKVAALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
+ +F + K D F+T L ++ R + +K +M E G++ +
Sbjct: 343 DAAEHMFYLMATKGCSPDIITFNT-----LIAGYCRAKRVDDGIKLLHEMTEAGLVANTI 397
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
Y +LI F + ++ A++L +E G+ + C L+ + G ++ L++ ++M
Sbjct: 398 TYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 457
Query: 356 KNAKLKIS----------DCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+ +K+ I D + I ++G + A ++YE++ +G +P +TY S
Sbjct: 458 QKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNS 517
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I+ C+ + +A ++F M K F VV +++++ Y K GR+ D + L +M +G
Sbjct: 518 VIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 577
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
N Y +L+ + N+ +++EM V PD ++ +++ E V
Sbjct: 578 IVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAV 637
Query: 525 KFYNEFRMNGG 535
+ +M+ G
Sbjct: 638 AMLEDLQMSVG 648
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 149/342 (43%), Gaps = 20/342 (5%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ L + L + GR EA+ M E G+ + Y +++ + + A L ++ E
Sbjct: 182 FTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 241
Query: 322 EKGMLRDPEVCL-------KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNG 373
E ++ P V + ++ + G + +++ M K D ++ A++N
Sbjct: 242 EVSHIK-PNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINA 300
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
F K ++ A ++Y++++ +G IP +TY+S+I+ +C+ AE +F M KG
Sbjct: 301 FVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPD 360
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
++ +++++A Y + R+ D + L+ +M G N Y +L+ + +L + L +
Sbjct: 361 IITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQ 420
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR-----------MNGGVIDRAIA 542
EM V P+ V+ T++ + ++ + + NG D
Sbjct: 421 EMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTY 480
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
I++ + E +L ++M G D Y+S ++ L
Sbjct: 481 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGL 522
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 105/503 (20%), Positives = 208/503 (41%), Gaps = 42/503 (8%)
Query: 114 RPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
RP S + L+ +V+ + D ++SL ++ V +A++ + L+ K A
Sbjct: 73 RPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFA 132
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGC------YC 225
L F G+I L F+ + ++ L + V +++ A + C +
Sbjct: 133 ---LSTF---GKITKLGFHPTVVTFSTL---LHGLCVEDRISEALDLFHQMCKPNVVTFT 183
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+M + G + AL L + Y + D + K G AL R M
Sbjct: 184 TLMNGLCREGRVVEAVALLDRMLEDGLQPNQIT---YGTIVDGMCKMGDTVSALNLLRKM 240
Query: 286 KEKGILEDPSIY-------ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLV 336
+E ++ P++ +I F S A++L +E E+ + P+V L+
Sbjct: 241 EEVSHIK-PNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKI-SPDVVTYNALI 298
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+++EG + ++ + M + S ++++GF K+ AA ++ + ++GC
Sbjct: 299 NAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 358
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P +T+ ++I YCR K+ EM + G + Y++++ + + G + A L
Sbjct: 359 PDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDL 418
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK-----------VTPDKV 505
+ +M + G PNV N+L+D L+ +++K M++ K V PD
Sbjct: 419 LQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQ 478
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y +IS +F + Y E G V D ++ K S+++E ++ M
Sbjct: 479 TYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSM 538
Query: 566 KSEGTKLDERLYHSAMNALRDAG 588
S+ + + + +N AG
Sbjct: 539 GSKSFSPNVVTFTTLINGYCKAG 561
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 143/337 (42%), Gaps = 15/337 (4%)
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
+ GR + R M+ + + + + L+ F S +++ A F + + G P
Sbjct: 90 RMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGF--HPT 147
Query: 331 VCLKLVLMY--IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
V L++ E + + LD+ M K + ++NG + AV + +
Sbjct: 148 VVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLD 203
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY------SSMVA 442
+++ G P Q+TY +I++ C++ A + +M++ K V + M+
Sbjct: 204 RMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMIN 263
Query: 443 MYGKTGRIRDAMWLVAKM-KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ +GR +A L+ +M + K P+V YN+L++ + + E+L+ EM R +
Sbjct: 264 GFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 323
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P ++Y+++I + + D + G D ++ + + ++++ +KL
Sbjct: 324 PSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKL 383
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
L +M G + Y + ++ G AQ L Q
Sbjct: 384 LHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQ 420
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 168/371 (45%), Gaps = 7/371 (1%)
Query: 141 EDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKL 199
ED K + D ++ + ++ + R K+ A L IT+G + ++ +N+ M K
Sbjct: 259 EDMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKG 318
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
M I V+ +M G + Y ++ G ++ + +E R + +
Sbjct: 319 KMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGI-VEISKRYM-----TQ 372
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+Y L +L K G EA + F DM + + Y S++ S + A E+ +
Sbjct: 373 GIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSK 432
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
EKG++ D + + + + D+ E MK +++ F +
Sbjct: 433 IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGE 492
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A+ ++E+L C P ++Y S+IN + +A F EMQ+KG + VV YS+
Sbjct: 493 VDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYST 552
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +GKT R+ A L +M KGC+PN+ YN L+D ++ + L+ +M+++
Sbjct: 553 LMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKMKQQG 612
Query: 500 VTPDKVSYTTV 510
+TPD ++YT +
Sbjct: 613 LTPDSITYTVL 623
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 178/406 (43%), Gaps = 46/406 (11%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY +++ G LD Y +++A K EK +F + K R +S Y I+
Sbjct: 225 VYCEIRRGGHKLDIFAYNMLLDALAK---DEKACQVFEDMKKRHCRRDEYS---YTIMIR 278
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
++G+ G+ EA+ F +M +G+ + Y +L+ A V A ++F E G R
Sbjct: 279 TMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETG-CR 337
Query: 328 DPEVCLKLVL-MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK---------- 376
E LVL + + EG + + +VE +K ++ I +V SK
Sbjct: 338 PNEYTYSLVLNLLVAEGQLVRLDGIVEI---SKRYMTQGIYSYLVRTLSKLGHVSEAHRL 394
Query: 377 ------------RRGYWA-------------AVKVYEQLISQGCIPGQVTYASIINAYCR 411
R Y + A+++ ++ +G + + Y ++ +A +
Sbjct: 395 FCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGK 454
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ S +F +M++ G + Y+ +++ +G+ G + +A+ + +++ C+P++
Sbjct: 455 LKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIIS 514
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
YNSL++ G+ ++ + +KEM+ + + PD V+Y+T++ + + +M + E
Sbjct: 515 YNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEML 574
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ G + I++ K + E V L MK +G D Y
Sbjct: 575 VKGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKMKQQGLTPDSITY 620
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 125/302 (41%), Gaps = 43/302 (14%)
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
DP + +++L+ L ++ D V S+ ++ +K + + + VN G +++
Sbjct: 132 DPFLYNRIILILSRSNLSDR-FDRVRSILDSMVKSNVHGNISTVNILIGFFGDTEDLQMC 190
Query: 388 EQLISQ-GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA---------- 436
+L+ + G TY ++ AY R SKA V+ E+++ G + A
Sbjct: 191 LRLVKKWGLKMNSFTYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK 250
Query: 437 ----------------------YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
Y+ M+ G+ G+ +A+ L +M +G NV YN+
Sbjct: 251 DEKACQVFEDMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNT 310
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS---AYNRAREFDMCVKFYNEFR 531
LM + + K + + +++ M P++ +Y+ V++ A + D V+ +
Sbjct: 311 LMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKRYM 370
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
G I +V SKL + E +L DM S K + Y S + +L AG +
Sbjct: 371 TQG------IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTI 424
Query: 592 QA 593
+A
Sbjct: 425 EA 426
>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 938
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/525 (20%), Positives = 231/525 (44%), Gaps = 17/525 (3%)
Query: 77 VPDAKKFDSFLHGMLK--DPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
VP+ + + + G+ K D + E E P T +I V+ +
Sbjct: 361 VPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNV----VTYSSMINGYVKKGMLE 416
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQ----VFITDGEIALLAFN 190
VSL + NV+P+ T ++ +A K ++A+ + + + + + L A
Sbjct: 417 EAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALV 476
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ + ++ + + M S G+ LD Y +++ ++K GD E + E + +
Sbjct: 477 NHLKRIGRIKEVKGLV---KDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEK 533
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
++ P+ Y +L L K G+ A ++ M+EKGI D + + ++ S +
Sbjct: 534 EM---PWDVVSYNVLISGLLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDF 589
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
+ +L+ + + G+ +C +V M E+G +++ +D+++ M ++ +
Sbjct: 590 EGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIF 649
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++ SK + A K +E L+S G + Y ++I C++ + KA V +M+ +GF
Sbjct: 650 LDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGF 709
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
V +++++ Y + A+ + M G PNV YN+++ A +++VEK
Sbjct: 710 VPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEK 769
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
EM+ R + PD +Y +IS + + Y E +G V + +++ F+
Sbjct: 770 WLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFA 829
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
K+ ++ + +L+++M + Y + ++ L + +W
Sbjct: 830 KVGKMLQATELMKEMGKRRVSPNTSTYCTMISGLCKLCTHPEVEW 874
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/477 (23%), Positives = 207/477 (43%), Gaps = 40/477 (8%)
Query: 153 HTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTI-LVYE 210
HT RL SC R + A TL T G + L +NS + +N + + + LVY
Sbjct: 62 HTLFRLYLSC--GRLYGAARTL-SAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYS 118
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
KM + G+ D ++ + K+G +L L + +D+ ++T + L
Sbjct: 119 KMIACGVSPDVFALNVLIHSLCKVGQLSFAISL-LRNRVISVDTVTYNT-----VISGLC 172
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR--- 327
+ G A EA +F +M + GIL D + +LI F + A+ L E E ++
Sbjct: 173 EHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHTI 232
Query: 328 -----------------------DPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
DP+V ++ ++G V + ++ M+ +
Sbjct: 233 LISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYP 292
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
+ +V+ K + Y A+ +Y Q++ +G V Y ++ + +AEK F
Sbjct: 293 NHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTF 352
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
+ + VV Y+++V K G + A +++ +M K PNV Y+S+++ + +
Sbjct: 353 KMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKK 412
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
L + L ++ME + V P+ +Y TVI +A + ++ + E R+ G + I
Sbjct: 413 GMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYIL 472
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA-QWLQQ 598
+V ++ +I+E+ L++DM S+G LD Y S ++ G + A W ++
Sbjct: 473 DALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEE 529
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 95/473 (20%), Positives = 202/473 (42%), Gaps = 40/473 (8%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTI 206
V PD + L+ S + + A +LL+ + + + +N+ + G + +
Sbjct: 124 GVSPDVFALNVLIHSLCKVGQLSFAISLLRNRVIS--VDTVTYNTVISGLCEHGLADEAY 181
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD------STPFSTH 260
+M GI+ D+ + +++ + K+G+ + AL E L S+ ++ H
Sbjct: 182 QFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHTILISSYYNLH 241
Query: 261 -------------------MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
+ + + L K G+ E R+M+E G+ + Y +L+
Sbjct: 242 AIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLV 301
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
S + + A L+ + +G+ D + + VLM GL K D+ E+ K K+
Sbjct: 302 DSLFKAKDYRHALALYSQMVVRGIPVD--LVVYTVLM---AGLF-KAGDLREAEKTFKML 355
Query: 362 ISD------CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+ D A+V+G K +A + Q++ + P VTY+S+IN Y + +
Sbjct: 356 LEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGML 415
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+A + +M+ + Y +++ K G+ A + +M+ G E N +I ++L
Sbjct: 416 EEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDAL 475
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
++ R +++V+ L K+M + VT D ++YT++I + + + + + + E +
Sbjct: 476 VNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEM 535
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
D +++ K ++ + M+ +G + D ++ MN+ R G
Sbjct: 536 PWDVVSYNVLISGLLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQG 587
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 111/595 (18%), Positives = 230/595 (38%), Gaps = 83/595 (13%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F S ++ + KD + E E +++ + P T L+ L ++K + +
Sbjct: 257 PDVVTFSSIINRLCKDGKVMEGGL-LLREMEEMGVY-PNHVTYTTLVDSLFKAKDYRHAL 314
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA------------ 185
+L + + D + L+A +A + A ++ + D E+
Sbjct: 315 ALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGL 374
Query: 186 ------------------------LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
++ ++S + GY K M + + KM+ +V +
Sbjct: 375 CKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNG 434
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y +++ +K G E + + K +L + ++ L + L + GR E
Sbjct: 435 FTYGTVIDGLFKAGKQEVASEM---SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGL 491
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK--------------GMLR 327
+DM KG+ D Y SLI F + + A +E +EK G+L+
Sbjct: 492 VKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLK 551
Query: 328 ------------------DPEVCLKLVLMYIE--EGLVEKTLDVVESMKNAKLKISDCIS 367
+P++ ++M + +G E L + + MK+ +K S I
Sbjct: 552 FGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMI- 610
Query: 368 CAIVNGFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
C IV G +G A+ + +Q++ P TY ++ + + +A+ +F +
Sbjct: 611 CNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSK---HKRADAIFKTHE 667
Query: 427 ---QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
G Y++++A K G R A ++ M+A+G P+ +N+LM +
Sbjct: 668 TLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGS 727
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
++ + + M ++P+ +Y T+I + A K+ +E + G D
Sbjct: 728 HVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYN 787
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
++ +K+ +E + + +M ++G Y+ ++ G +QA L +
Sbjct: 788 ALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMK 842
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 177/411 (43%), Gaps = 38/411 (9%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
++ MK G++ ++ + K +EK L+ E ++ S+ + + I+ +
Sbjct: 144 FDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVT---FNIMINV 200
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L K G+ +A +F M+ GI + Y ++I + S V+ A +F + +G+ D
Sbjct: 201 LCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPD 260
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK------------ 376
+ +EG +E+ ++E MK L+ + +++G+
Sbjct: 261 SYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRD 320
Query: 377 ---RRGYWAAVKVYEQLI--------------------SQGCIPGQVTYASIINAYCRIA 413
R G V Y LI +G +P VTY +IN YCR
Sbjct: 321 KMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCG 380
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
KA + EM KG V Y+S++ + K GR++ A L K+ KG P++ ++N
Sbjct: 381 NVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFN 440
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+L+D H N+ + + KEM++ KV PD+V++ T++ R + + + E +
Sbjct: 441 ALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSR 500
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G D ++ +SK +++ ++ +M S G Y++ + L
Sbjct: 501 GIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGL 551
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 95/499 (19%), Positives = 200/499 (40%), Gaps = 74/499 (14%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA---------- 171
LLIR + K+ D + K V+P H C+ +++ +++ + + A
Sbjct: 126 LLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRM 185
Query: 172 ---------NTLLQVFITDGEIA-----------------LLAFNSAMGGYNKLHMYYST 205
N ++ V +G++ ++ +N+ + GY
Sbjct: 186 RIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGA 245
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
++++ MK G+ DS Y + K G E+ + + + K L T + Y L
Sbjct: 246 RMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVT---YNTL 302
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
D G A + M +G++ S Y LI + ++ A+ + KE EKG+
Sbjct: 303 IDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGL 362
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ D T ++ ++NG+ + A
Sbjct: 363 VPD-----------------SVTYNI------------------LINGYCRCGNVKKAFT 387
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+++++IS+G P +VTY S+I + +A+ +F ++ +KG ++ +++++ +
Sbjct: 388 LHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHC 447
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
G + A ++ +M P+ +N+LM R + +L +EM+ R + PD +
Sbjct: 448 ANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHI 507
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
SY T+IS Y++ + + +E G ++ K + + +LL++M
Sbjct: 508 SYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEM 567
Query: 566 KSEGTKLDERLYHSAMNAL 584
S+G ++ Y S + +
Sbjct: 568 ISKGITPNDNTYLSLIEGI 586
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 153/358 (42%), Gaps = 36/358 (10%)
Query: 143 FKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL----LAFNSAMGGY-- 196
K V PD++T ++ + K + A+ +L+ EI L + +N+ + GY
Sbjct: 252 MKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKM---KEIGLRPTAVTYNTLIDGYCN 308
Query: 197 -NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS- 254
L M + +KM G++ Y + + ALFL+CK + D
Sbjct: 309 KGNLEMAFD---YRDKMVREGLMPTVSTYNML------------IHALFLDCKMDEADGI 353
Query: 255 ---------TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
P S Y IL + + G +A +M KGI Y SLI +
Sbjct: 354 IKEMSEKGLVPDSV-TYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLS 412
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+K A++LF++ KG+ D + L+ + G +++ +++ M K+ +
Sbjct: 413 KRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEV 472
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++ G + AA ++ E++ S+G P ++Y ++I+ Y + A +V EM
Sbjct: 473 TFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM 532
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
GF+ ++ Y++++ K A L+ +M +KG PN Y SL++ G +
Sbjct: 533 LSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNVE 590
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 114/284 (40%)
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A E F + KG++ C ++ ++++ EK + M ++K S ++N
Sbjct: 140 AFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMIN 199
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
K A + + + G P VTY +II+ YC A +F M+ +G
Sbjct: 200 VLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKP 259
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
Y S ++ K G++ +A ++ KMK G P YN+L+D + NL
Sbjct: 260 DSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYR 319
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+M R + P +Y +I A + D E G V D I++ + +
Sbjct: 320 DKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRC 379
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+++ L +M S+G + Y S + L G QA L
Sbjct: 380 GNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDL 423
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 147/368 (39%), Gaps = 39/368 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD+ + SF+ GM K+ + +E A + K++ RP T LI +
Sbjct: 259 PDSYTYGSFISGMCKEGKLEE-ASGMLEKMKEIG-LRPTAVTYNTLIDGYCNKGNLEMAF 316
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
+ ++P T + L+ + K A+ +++
Sbjct: 317 DYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIK--------------------- 355
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
+M G+V DS Y ++ Y + G+ +K L E S+ + T
Sbjct: 356 -------------EMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRV 402
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ Y L L K GR +A F + KGI D ++ +LI + + A +
Sbjct: 403 T---YTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAML 459
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
KE ++ ++ D L+ EG VE +++E MK+ +K +++G+SKR
Sbjct: 460 KEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKR 519
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A +V ++++S G P +TY ++I C+ AE++ EM KG Y
Sbjct: 520 GDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTY 579
Query: 438 SSMVAMYG 445
S++ G
Sbjct: 580 LSLIEGIG 587
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
Query: 379 GYWAAVKVYEQL-ISQGC--IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
G ++ +V+ +L +++G I V Y +I A C + A + F M+ KG V
Sbjct: 98 GVYSIREVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVH 157
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
A + M++++ K+ R A L A+M + +V +N ++++ + L++ ++ M
Sbjct: 158 ACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLM 217
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
E + P+ V+Y T+I Y + ++ + G D G + K ++
Sbjct: 218 EALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKL 277
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
EE +L+ MK G + Y++ ++ + G
Sbjct: 278 EEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKG 310
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 180/401 (44%), Gaps = 39/401 (9%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P T +I K+++ + + K N+ PD +T + ++ + R+ + A+
Sbjct: 249 KPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASG 308
Query: 174 LLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+L + G + + +N+ + G ++M + GIV Y ++ A +
Sbjct: 309 VLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALF 368
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
E+ + E + + ++ + Y I + + G A +AL F +M EK I
Sbjct: 369 LEKRIEEAEDMIKEMREKGVEPDVVT---YNIQINGYCRCGNAKKALSLFDEMVEKNIRP 425
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
Y SLI F + AEE FK++ ++GML D + L+ + G +++ ++
Sbjct: 426 TVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLL 485
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ M NAK+ +P +VT+ +++ YCR
Sbjct: 486 KEMDNAKV-----------------------------------VPDEVTFNTLMQGYCRE 510
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+A+K+ EM+++G ++Y+++++ Y K G ++DA+ + +M + G +P + Y
Sbjct: 511 RKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTY 570
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
N+L+ + + E+L +EM+ + +TPD +Y VI A
Sbjct: 571 NALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEA 611
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 139/297 (46%)
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
G+ A K F+ MK+K + D Y S I ++ A + + E G++ +
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTY 325
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
L+ +G ++K + M N + S +++ + A + +++
Sbjct: 326 NALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMRE 385
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
+G P VTY IN YCR KA +F EM +K V Y+S++ ++GK R+ +
Sbjct: 386 KGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSE 445
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A K +G P++ ++N+L+D H N+ + +L KEM+ KV PD+V++ T++
Sbjct: 446 AEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQ 505
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
Y R R+ + K +E + G D ++ +SK +++ +++ +M S G
Sbjct: 506 GYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLG 562
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 177/423 (41%), Gaps = 43/423 (10%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQV 177
T ++I L + KW ++Y V P+ T + ++ C+R KF+ A+ + +
Sbjct: 219 TFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG-KFEAASKIFKT 277
Query: 178 FITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG 235
+ D + +NS + K V K+ +G+V ++ Y +++ G
Sbjct: 278 -MKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKG 336
Query: 236 DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
D +K A E +R + ++ F+ Y +L +L R EA ++M+EKG+ D
Sbjct: 337 DLDKAFAYRDEMMNRGIVASVFT---YNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVV 393
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
Y I + K A LF E EK + T++ S+
Sbjct: 394 TYNIQINGYCRCGNAKKALSLFDEMVEKN--------------------IRPTVETYTSL 433
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
++ F KR A + +++ I +G +P + + ++I+ +C
Sbjct: 434 ---------------IDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNI 478
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+A ++ EM V +++++ Y + ++ +A L+ +MK +G +P+ YN+L
Sbjct: 479 DRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTL 538
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ + + +++ +++ EM P ++Y +I Y++ E D + E + G
Sbjct: 539 ISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGI 598
Query: 536 VID 538
D
Sbjct: 599 TPD 601
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 90/199 (45%), Gaps = 2/199 (1%)
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
VYE+++ VT+ +IN CR + KA+ M+ G VV Y++++ Y
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
G+ A + MK K +P+ + YNS + + + + + + ++ + P+ V
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAV 323
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQD 564
+Y +I + D + +E MN G++ +++ +IEE ++++
Sbjct: 324 TYNALIDGCCNKGDLDKAFAYRDEM-MNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKE 382
Query: 565 MKSEGTKLDERLYHSAMNA 583
M+ +G + D Y+ +N
Sbjct: 383 MREKGVEPDVVTYNIQING 401
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 148/288 (51%), Gaps = 12/288 (4%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y + G + AL+ +M+ +GI + Y++L+ E+ LA++++K+
Sbjct: 1 YTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQ 60
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKT------LDVVESMKNAKLKISDCISCAIVNG 373
E+G P + +L+ +E + T + +V S A+++ + +++
Sbjct: 61 MLEEGC--SPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYN----TVISA 114
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+K A+KVYE++++ G P TY ++I+AY + KA +F +M ++G ++
Sbjct: 115 CNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERN 174
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V+ YSS+++ K GR A+ L +KM + C+PNV YNSL+ + + +L++
Sbjct: 175 VITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFE 234
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+M+ + PD ++Y +I+AY R ++ +K + + + G D A+
Sbjct: 235 QMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAV 282
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 2/181 (1%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y + + KSG+ +ALK + M G+ + Y +LI ++ +V+ A ++F++
Sbjct: 108 YNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMI 167
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+G R+ L+ + G E L++ M K + +++ S G+W
Sbjct: 168 RRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACS-HGGHW 226
Query: 382 A-AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A +++EQ+ +QGC P +TY +I AY R + +A K F +MQ +G ++S+
Sbjct: 227 EKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSL 286
Query: 441 V 441
+
Sbjct: 287 M 287
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 89/188 (47%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TY ++I+ +A ++ EM+ +G D V YS+++ + K + A + +M
Sbjct: 2 TYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM 61
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+GC PN+ YN L+D+ + + +L + R + + +Y TVISA N++ +
Sbjct: 62 LEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQP 121
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ +K Y + G ++ + K Q+E+ + + +DM G + + Y S
Sbjct: 122 EQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSSL 181
Query: 581 MNALRDAG 588
++A AG
Sbjct: 182 ISACEKAG 189
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 6/258 (2%)
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVY 209
+ HT S L+ C++A + +A + + + +G L+ +N + +
Sbjct: 34 NVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVEASKRKTTERRRLA 93
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+ +GI + Y ++ A K G E+ AL + K P +T Y L +
Sbjct: 94 VALVRSGIQAEVRTYNTVISACNKSGQPEQ--ALKVYEKMLAAGVKPSAT-TYTALISAY 150
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
GK G+ +AL FRDM +G + Y+SLI + ++A ELF + ++ +
Sbjct: 151 GKKGQVEKALDIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNV 210
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYE 388
L+ G EK ++ E M+ K C ++ + +R G W A+K +E
Sbjct: 211 VTYNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAY-ERGGQWRRALKAFE 269
Query: 389 QLISQGCIPGQVTYASII 406
Q+ SQGC P + S++
Sbjct: 270 QMQSQGCHPDAAVFNSLM 287
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/505 (20%), Positives = 224/505 (44%), Gaps = 36/505 (7%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
+F+ + +I L+++ +D +S + + +P+ T L++ ++ ++
Sbjct: 102 DFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWC 161
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG---------IVLDS 221
++ + +T+G FNS + Y Y + +M + G I + S
Sbjct: 162 KRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGS 221
Query: 222 GCYCQIMEAYYKIGDSEKVAALFL--ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
C + + + + +EK+ L C K++ F+ + LC +GK +AF+ +
Sbjct: 222 ICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA----RCLC-GVGKFDKAFQLI 276
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
K +M KG + D S Y+ +I T+V+ A LF+E + G+ D L+ +
Sbjct: 277 K---EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 333
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ GL+E+ + E M++ + A+++ + K + A ++ +++ GC P
Sbjct: 334 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 393
Query: 400 VTYASIINAYCRIALYSKAEKVFIEM----------------QQKGFDKCVVAYSSMVAM 443
VTY ++++ C+ SKA +V+ ++ + VV Y ++V
Sbjct: 394 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 453
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K ++ A L+ M + GCEPN +Y++L+D +A + ++++ +M + P
Sbjct: 454 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 513
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+YT++I + D+ +K ++ + + M+ ++ + E+ +KLL
Sbjct: 514 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLS 573
Query: 564 DMKSEGTKLDERLYHSAMNALRDAG 588
M+ +G + Y + ++ L AG
Sbjct: 574 LMEEKGCSPNVVTYTALIDGLGKAG 598
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 108/502 (21%), Positives = 193/502 (38%), Gaps = 92/502 (18%)
Query: 169 KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
KI +L ++ + F + G K + I ++M G V D+ Y +++
Sbjct: 239 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLI---KEMMRKGFVPDTSTYSKVI 295
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
EK LF E K + TP + Y IL DS K+G +A F +M+
Sbjct: 296 TFLCHATKVEKAFLLFQEMK--MVGVTP-DVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G Y +LI ++ +V A ++F + G + LV + G + K
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412
Query: 349 LDVVESMKNAK----------------LKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
+V + L + A+V+G K A ++ + ++S
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF---------------------- 430
GC P + Y ++I+ +C+ A++VF++M + G+
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 532
Query: 431 ----------DKC---VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
D C VV Y++M+ + G A+ L++ M+ KGC PNV Y +L+D
Sbjct: 533 AMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID 592
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS------AYNRAR------------- 518
G+A + L+ +M R+ +P+ V+Y +I+ ++AR
Sbjct: 593 GLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPK 652
Query: 519 --------------EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
F + E G V + G+++ FSK ++E ++L ++
Sbjct: 653 YLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKE 712
Query: 565 MK--SEGTKLDERLYHSAMNAL 584
M K D +Y S + AL
Sbjct: 713 MMEVPSSVKTDNDMYASLIQAL 734
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/502 (20%), Positives = 201/502 (40%), Gaps = 57/502 (11%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ ST +I +L + K + L ++ K+ V PD +T + L+ S +A + A
Sbjct: 284 FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQ 343
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L + + G ++ + + + Y K ++ +M AG + Y +++
Sbjct: 344 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 403
Query: 232 YKIGDSEKV---------------AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
K G+ K + + C+ R + T Y L D L K+ +
Sbjct: 404 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT--YGALVDGLCKAHKVD 461
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG------------ 324
A + M G + +Y +LI F ++ A+E+F + + G
Sbjct: 462 HAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 521
Query: 325 --MLRDPEV--------------CLKLVLMYIE--EGLV-----EKTLDVVESMKNAKLK 361
M +D + C V+ Y +GL EK L ++ M+
Sbjct: 522 DRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS 581
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ A+++G K ++ ++ Q+ +GC P VTY +IN C L KA +
Sbjct: 582 PNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 641
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
EM+Q + K + Y + + K+ ++ ++ +M++ G P +Y L+D +
Sbjct: 642 LGEMKQTYWPKYLQGYRCAIQGFSKS--FIASLGILEEMESYGTVPIAPVYGMLIDCFSK 699
Query: 482 AKNLRQVEKLWKEMER--RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
A L +L KEM V D Y ++I A A + + + Y+E G V +
Sbjct: 700 AGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPEL 759
Query: 540 AIAGIMVGVFSKLSQIEELVKL 561
++ ++ ++ + +E ++L
Sbjct: 760 SVFVCLIKGLVEVKKWDEALQL 781
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 127/318 (39%), Gaps = 9/318 (2%)
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
+K+ G Y +L+ +S +V L + KE E G D +EG
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
LD++E K+ + +++G + + A+ ++ CIP VTY +
Sbjct: 91 WADALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+++ + + +++ M +G + ++S+V Y A L+ +M G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207
Query: 465 CEPNVWIYNSLM-DMHGRAK-----NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
C P +YN + + G+ K L EK++ EM +KV+
Sbjct: 208 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+FD + E G V D + ++ +++E+ L Q+MK G D Y
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327
Query: 579 SAMNALRDAGLQMQAQWL 596
+++ AGL QAQWL
Sbjct: 328 ILIDSFCKAGLIEQAQWL 345
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 168/341 (49%), Gaps = 4/341 (1%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--CSFASITEVKLAEE 315
+ + + L + G+SG EA+ F MKE G+ + Y ++I C + E K +
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM-EFKQVAK 325
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
F E + + D L+ + GL E ++ + M N +++ +++
Sbjct: 326 FFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAIC 385
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A ++ Q+ ++ +P V+Y+++I+ + + + +A +F EM+ V
Sbjct: 386 KGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRV 445
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+Y++++++Y K GR +A+ ++ +M + G + +V YN+L+ +G+ +V+K++ EM
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEM 505
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+R V P+ ++Y+T+I Y++ + ++ + EF+ G D + ++ K +
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNAL-RDAGLQMQAQW 595
V L+ +M EG + Y+S ++A R A ++ A +
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSADY 606
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 145/303 (47%), Gaps = 4/303 (1%)
Query: 186 LLAFNSAMGGYNKLHMYYSTIL-VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
L+ +N+ + K M + + +++M+ + D + ++ + G E LF
Sbjct: 303 LVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLF 362
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E +R+++ FS Y L D++ K G+ A + M K I+ + Y+++I F
Sbjct: 363 DEMSNRRIEQDVFS---YNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGF 419
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
A A LF E + D L+ +Y + G E+ LD++ M + +K
Sbjct: 420 AKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV 479
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
A++ G+ K+ Y KV+ ++ + +P +TY+++I+ Y + LY +A +VF E
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFRE 539
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+ G VV YS+++ K G + A+ L+ +M +G PNV YNS++D GR+
Sbjct: 540 FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT 599
Query: 485 LRQ 487
+ +
Sbjct: 600 MER 602
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 169/370 (45%), Gaps = 8/370 (2%)
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF--FRDMKEKGILE 292
GD E +L L +S KL + T++ + LG G +A+ F F +E+ E
Sbjct: 177 GDDEMFHSLMLSFES-KLCGSDDCTYIIR----ELGNRGECDKAVGFYEFAVKRERRKNE 231
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ +++I + +V +A+ +F+ A G L+ Y GL E+ + V
Sbjct: 232 QGKLASAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVF 291
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI-PGQVTYASIINAYCR 411
SMK L+ + A+++ K + V + + + C+ P ++T+ S++ R
Sbjct: 292 NSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSR 351
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
L+ A +F EM + ++ V +Y++++ K G++ A ++A+M AK PNV
Sbjct: 352 GGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVS 411
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y++++D +A + L+ EM + D+VSY T++S Y + + + E
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
G D ++G + K + +E+ K+ +MK E + Y + ++ GL
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 592 QAQWLQQNFE 601
+A + + F+
Sbjct: 532 EAMEVFREFK 541
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/419 (20%), Positives = 194/419 (46%), Gaps = 17/419 (4%)
Query: 155 CSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMK 213
S ++++ R K IA + + + G + AF++ + Y + ++ I V+ MK
Sbjct: 236 ASAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK 295
Query: 214 SAGIVLDSGCYCQIMEAYYKIG-DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKS 272
G+ + Y +++A K G + ++VA F E + + + + +C +
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCS---RG 352
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
G A F +M + I +D Y +L+ + ++ LA E+ + K ++ +
Sbjct: 353 GLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSY 412
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
++ + + G ++ L++ M+ + + +++ ++K A+ + ++ S
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
G VTY +++ Y + Y + +KVF EM+++ ++ YS+++ Y K G ++
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
AM + + K+ G +V +Y++L+D + + L EM + ++P+ V+Y ++I
Sbjct: 533 AMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE--ELVKLLQDMKSEG 569
A+ R+ + + NGG + + + + S+L++ E +++L + SEG
Sbjct: 593 AFGRSATMERSADYS-----NGGSLPFSSSAL-----SELTETEGNRVIQLFGQLTSEG 641
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 180/396 (45%), Gaps = 13/396 (3%)
Query: 203 YSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV--AALFLECKSRKLDSTPF--S 258
Y+ ++++M++ G+ +D Y ++ + G + K FLE KL ++
Sbjct: 229 YTGFRLFQEMQAEGVQVDGKVYNDLI---FACGQAHKPNEGMFFLE----KLQASGLVAD 281
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
Y L SLGK GR EA +MK G+ + Y +L+ ++ +++ + +
Sbjct: 282 RDSYISLMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKT 341
Query: 319 EAEEKGM-LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+ GM + CL L+ Y GL+++ + + M++ ++ + + ++ +
Sbjct: 342 LLRDTGMSINKITYCL-LIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDT 400
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
+ VK+ ++ G P Y IIN + R +A F +MQ G + VV++
Sbjct: 401 GQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSW 460
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+S++ K G+ +A L KM GC P +N ++ G K V ++ +EM
Sbjct: 461 NSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRS 520
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ + P+ V+YTT++ Y +AR F V+ + +G + +++L E+
Sbjct: 521 KGMFPNVVTYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQ 580
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ +LQ M+ E +++ + + +NA AG +A
Sbjct: 581 TLHVLQTMEKENIEINLAMLNLLINAFSMAGRSQEA 616
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 165/345 (47%), Gaps = 3/345 (0%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L A+N+ +GGY++ V ++ G+ ++ YC +++AY + G +++ AL+
Sbjct: 317 LKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAYARAGLMDRLEALYQ 376
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E R D P +T+MY + +G+ + +K R+M++ G+ D +Y +I +F
Sbjct: 377 EM--RDCDIRP-NTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFG 433
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+++ A F + ++ G+ D L+ + G + + M N +
Sbjct: 434 RTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQ 493
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
+++G + + + ++ E++ S+G P VTY ++++ Y + L+ A + M
Sbjct: 494 TFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQTM 553
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
++ G AYS++ Y + G + ++ M+ + E N+ + N L++ A
Sbjct: 554 KEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLINAFSMAGRS 613
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
++ +++ ++ +T DK++YTT++ A RA + D ++E
Sbjct: 614 QEAFAVFEYIKEAGLTADKITYTTLMKALIRAEKLDEVSGVFDEM 658
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 153/357 (42%), Gaps = 14/357 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ K +++ L G + Q Q++ D + K T LLI ++ D +
Sbjct: 315 PNLKAYNTLLGGYSRKGQLQQI--DTVKTLLRDTGMSINKITYCLLIDAYARAGLMDRLE 372
Query: 138 SLSEDFKIYNVLPDAHTCSRLVA----SCVRARKFKIANTLLQVFIT-DGEIALLAFNSA 192
+L ++ + ++ P+ + +R++ + + K+ + Q +T D + +N
Sbjct: 373 ALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHV----YNVI 428
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ + + + + KM+ GI D + +++A K G + L+ + +
Sbjct: 429 INTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVN--- 485
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D + + I+ LG+ R + + +M+ KG+ + Y +L+ +A +
Sbjct: 486 DGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQD 545
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A E + +E GM P L Y + G+ E+TL V+++M+ ++I+ + ++N
Sbjct: 546 AVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLIN 605
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
FS A V+E + G ++TY +++ A R + VF EM + G
Sbjct: 606 AFSMAGRSQEAFAVFEYIKEAGLTADKITYTTLMKALIRAEKLDEVSGVFDEMIKAG 662
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 36/235 (15%)
Query: 385 KVYEQLISQGCIPGQVTYASII------NAYCR---------IALYSK----------AE 419
+ + L+ + C+ G+ ++AS + N++CR I Y + AE
Sbjct: 109 RAWHWLLQELCVSGRSSFASELLEWLRENSFCRTYDVLDSVVIHGYGRERKLHKALEVAE 168
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM- 478
K+ +Q++G++ V AY+ YGK A+ ++KMK G P+V Y ++
Sbjct: 169 KLGSNLQRRGYNALVGAYAQNRD-YGK------ALETLSKMKTLGFPPDVVSYTHVIQAC 221
Query: 479 -HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
HG ++ +L++EM+ V D Y +I A +A + + + F + + +G V
Sbjct: 222 RHG-VVDIYTGFRLFQEMQAEGVQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLVA 280
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
DR ++ K + E LL++MK G + + + Y++ + G Q+Q
Sbjct: 281 DRDSYISLMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKG-QLQ 334
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 182/416 (43%), Gaps = 29/416 (6%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
A+ A N + G K + + VY M + G + Y +++ + GD K LF
Sbjct: 157 AMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLF 216
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E +K+ T +Y IL L R EA FR M+ G+L + Y +++ +
Sbjct: 217 DEMIEKKIFPT---VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
I VK A EL++E G+L P V + G++ L + M +A+ + D
Sbjct: 274 CKIAHVKKALELYQEMLGDGLL--PNV--------VTFGILIDGLCKTDEMVSARKFLID 323
Query: 365 CISCAIV----------NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
S +V +G+ K A+ ++ ++ +P TY+ +I C +
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+A+ + EM++KGF V Y++++ Y K G + A+ + ++M KG EPN+ +++
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L+D + +A + L+ EM + + PD V+YT +I + + + + E + G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLL------QDMKSEGTKLDERLYHSAMNAL 584
+ ++ K +I + +KL S+ +LD LY AL
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLAL 559
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 24/227 (10%)
Query: 329 PEVCLKLVLMYIEEGLVEKTL------DVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
P V L++ + E GLVE+ L DV+ +M+ + +++G K+ +
Sbjct: 126 PNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNM---------VLDGLVKKGRFDT 176
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
KVY ++++G P VTY ++I+ CR + KA ++F EM +K VV Y+ ++
Sbjct: 177 MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR 236
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
RI +A + M+ G PN++ YN++MD + + ++++ +L++EM + P
Sbjct: 237 GLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLP 296
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+ V++ +I + E KF +ID A G++ +F
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKF---------LIDMASFGVVPNIF 334
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 143/342 (41%), Gaps = 37/342 (10%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P +LIR L + S+ + +LP+ +T
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYT-------------------- 265
Query: 175 LQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
+N+ M GY K+ + +Y++M G++ + + +++ K
Sbjct: 266 --------------YNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKT 311
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
+ ++ S + F +Y L D K+G EAL ++++ IL D
Sbjct: 312 DEMVSARKFLIDMASFGVVPNIF---VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDV 368
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
Y+ LI + ++ A+ L +E ++KG L + L+ Y +EG +EK ++V
Sbjct: 369 FTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQ 428
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
M ++ + +++G+ K AA+ +Y +++ +G +P V Y ++I+ + +
Sbjct: 429 MTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
+A ++ EMQ+ G V S ++ K GRI DA+ L
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 146/343 (42%), Gaps = 37/343 (10%)
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
K+D P + ++ D L K GR K + DM +G + Y +LI +
Sbjct: 151 KMDVLP-AMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDF 209
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A LF E EK + P V + +L+ GL ++ +IS+
Sbjct: 210 LKAFRLFDEMIEKKIF--PTVVIYTILI---RGLCGES------------RISE------ 246
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
A ++ + + G +P TY ++++ YC+IA KA +++ EM G
Sbjct: 247 ------------AESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGL 294
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
VV + ++ KT + A + M + G PN+++YN L+D + +A NL +
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALS 354
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L E+E+ ++ PD +Y+ +I + E + G + + ++ +
Sbjct: 355 LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYC 414
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
K +E+ +++ M +G + + + + ++ AG +M+A
Sbjct: 415 KEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG-KMEA 456
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
GF+ + +S+++MY TG + DA + ++ +K N+ + S++ + + +
Sbjct: 661 GFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKA 716
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+L+++M+ V PD V+ T +SA DM + R G D + ++ +
Sbjct: 717 LQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINM 776
Query: 549 FSKLSQI 555
+SK +I
Sbjct: 777 YSKCGEI 783
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 4/182 (2%)
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
+SL + + + +LPD T S L+ + + A+ LLQ G + + +N+ + G
Sbjct: 353 LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDG 412
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
Y K I V +M GI + + +++ Y K G E L+ E + L
Sbjct: 413 YCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPD 472
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y L D K G EA + ++M+E G+ + + LI + A +
Sbjct: 473 VVA---YTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529
Query: 316 LF 317
LF
Sbjct: 530 LF 531
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 191/424 (45%), Gaps = 19/424 (4%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ +N + GY K L++E+M++ IV D + ++ +Y+ G E L +
Sbjct: 394 IVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRD 453
Query: 247 CKSRKL--DSTPFSTHMYKILCD----SLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
L DS+ LCD L +GR EA+K ++ KGI + S+
Sbjct: 454 LSVSGLLHDSS---------LCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSI 504
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
I ++ + + A + + G+ C L++ + +G +++ + M +
Sbjct: 505 IAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGF 564
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+++ +++G+ + A ++ ++ +G P V +A+ IN C L + A
Sbjct: 565 PVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYD 624
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
VF +M +KGF Y+S++ + K G++ +A+ LV +M +G P+++ N ++
Sbjct: 625 VFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLC 684
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+ ++ + + +M R ++PD V+Y T+I Y +A + + +G D
Sbjct: 685 KQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLT 744
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA----LRDAGLQMQAQWL 596
I + + + +I V +L+++ S G + Y++ +NA + D + + A+ L
Sbjct: 745 TYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCNVILDHAMILTAKLL 804
Query: 597 QQNF 600
+ F
Sbjct: 805 KMAF 808
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 185/441 (41%), Gaps = 14/441 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P F + + K+ ELA Y++E + + ++I V+++
Sbjct: 356 PSIATFCTIIDAFCKEGNV-ELARKYFDEIEDM-GLSQNTIVYNIMISGYVKARDISQAN 413
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM---- 193
L E+ + +++PD T + LVA R K + N LL+ D ++ L +S++
Sbjct: 414 LLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLR----DLSVSGLLHDSSLCDVT 469
Query: 194 -GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
G Y + + E + GI + I+ AY G E+ A + K
Sbjct: 470 VAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEER--AFYAYGIMVKF 527
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
TP S+ +L SL + G EA DM +KG + L+ + I V +
Sbjct: 528 GLTPSSSTCSSLLI-SLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNM 586
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
AE L+ E + +G+ D + GL+ DV M ++ + +++
Sbjct: 587 AESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIG 646
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
GF K A+K+ ++ +G +P T II C+ A + F++M + G
Sbjct: 647 GFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSP 706
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+V Y++++ Y K + A L+ KM G EP++ YN + + + + + +
Sbjct: 707 DIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMIL 766
Query: 493 KEMERRKVTPDKVSYTTVISA 513
+E+ + P+ V+Y T+I+A
Sbjct: 767 EELISVGIVPNTVTYNTMINA 787
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 132/316 (41%), Gaps = 5/316 (1%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYS 204
+ + P + TCS L+ S VR A L I G + +AF + GY ++
Sbjct: 527 FGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNM 586
Query: 205 TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKI 264
++ +MK G+ D+ + + G +F + + F +Y
Sbjct: 587 AESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNF---VYNS 643
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L K G+ EALK R+M ++G+L D +IC +KLA E F + G
Sbjct: 644 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 703
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ D L+ Y + V D++ M ++ + ++G+ R AV
Sbjct: 704 LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAV 763
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+ E+LIS G +P VTY ++INA C + L A + ++ + F V + +++ +
Sbjct: 764 MILEELISVGIVPNTVTYNTMINAVCNVIL-DHAMILTAKLLKMAFVPNTVTVNVLLSQF 822
Query: 445 GKTGRIRDAMWLVAKM 460
K G A++ K+
Sbjct: 823 CKQGMPEKAIFWGQKL 838
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 138/324 (42%), Gaps = 37/324 (11%)
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
KS FEAL+ M+E G+ +PS + L + +LF + KG +
Sbjct: 230 KSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNF 289
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYEQ 389
L+L + +G ++ M + + D S IV + +G + A+ +
Sbjct: 290 TFNLLILEFCRKGWTRIGEALLHVMGKFRCE-PDVYSYNIVINANCLKGQSSYALHLLNL 348
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+I GC P T+ +II+A+C+ A K F E++ G +
Sbjct: 349 MIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQ----------------- 391
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
N +YN ++ + +A+++ Q L++EM + + PD +++ T
Sbjct: 392 ------------------NTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNT 433
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+++ + R + + + + ++G + D ++ + V + +E +KLL+++ +G
Sbjct: 434 LVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKG 493
Query: 570 TKLDERLYHSAMNALRDAGLQMQA 593
++S + A +AGL+ +A
Sbjct: 494 IPPSVVAFNSIIAAYGNAGLEERA 517
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 87/454 (19%), Positives = 169/454 (37%), Gaps = 69/454 (15%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
++ M + K M++ + + KM+ G+ + + + GD V LF +
Sbjct: 220 VLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDV 279
Query: 248 KSRKLDSTPFSTHM--------------------------------YKILCDSLGKSGRA 275
+ F+ ++ Y I+ ++ G++
Sbjct: 280 VRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQS 339
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
AL M E G + + ++I +F V+LA + F E E+ G+ ++ V +
Sbjct: 340 SYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIM 399
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY--------------- 380
+ Y++ + + + E M+ + + D I+ + R G
Sbjct: 400 ISGYVKARDISQANLLFEEMRTKDI-VPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSG 458
Query: 381 ----------------WA-----AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
WA A+K+ E L+ +G P V + SII AY L +A
Sbjct: 459 LLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAF 518
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
+ M + G SS++ + G + +A + M KG + L+D +
Sbjct: 519 YAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGY 578
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
R + E LW EM+ R V PD V++ I+ + +++ G V +
Sbjct: 579 FRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNN 638
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ ++G F K+ ++ E +KL+++M G D
Sbjct: 639 FVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPD 672
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 1/227 (0%)
Query: 377 RRGYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
R G AV K++ ++ +G P T+ +I +CR E + M + + V
Sbjct: 265 RAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVY 324
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+Y+ ++ G+ A+ L+ M GC+P++ + +++D + N+ K + E+
Sbjct: 325 SYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEI 384
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
E ++ + + Y +IS Y +AR+ + E R V D +V + +
Sbjct: 385 EDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKE 444
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
E+ +LL+D+ G D L + L AG +A L +N G
Sbjct: 445 EDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLG 491
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 181/389 (46%), Gaps = 7/389 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ M+ GI Y ++ AY K+G E L E + S+ + I +
Sbjct: 541 VFSDMQFIGIEPSRKIYESMISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTMI--E 598
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ GK A F + +K++ + D I+ +LI ++A + A +F EKG L
Sbjct: 599 AYGKIKLWQHAENFVKGLKQEPSI-DRRIWNALIHAYAESGLYEHARAVFDIMIEKGPLP 657
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ ++ I +G +++ +V+ +++ KIS +++ F+K + +K+Y
Sbjct: 658 TIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVMKIY 717
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ G +P Y S+I+ CR Y E + +EM++ GF+ + ++++ MY
Sbjct: 718 NGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGN 777
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE--KLWKEMERRKVTPDKV 505
G + + + G EPN YN+L+ M+ R NLR E L EM ++ +TP
Sbjct: 778 GNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSR--NLRPEEGFTLLNEMGKKGLTPKLE 835
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
SY ++++A +A+ ++ + + E R G ++R++ +++ ++ + +LL M
Sbjct: 836 SYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLASM 895
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
K +G + H M + AG +A+
Sbjct: 896 KEDGIEPTIATMHILMTSYGTAGHPDEAE 924
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 173/400 (43%), Gaps = 5/400 (1%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
FN+ MG Y + + + + M+ + D + ++ A K G +A L +
Sbjct: 66 FNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDLLLE 125
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
R++ P Y L + + +A+ F +M D Y +++
Sbjct: 126 VRQVGLRP-DVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCG 184
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ + AE +F+E EKG D L+ + +EG + V E + A K
Sbjct: 185 KAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYN 244
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++ + K A+ +Y+++ + GC P VTY +I++ ++ S A KV EM
Sbjct: 245 TMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADA 304
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G +V +S+++ Y K GR +A+ + M A G +P+ Y ++D+ R+ ++R++
Sbjct: 305 GLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKL 364
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
L++ M PD Y +++A + E+D + + + + ++ I++
Sbjct: 365 MALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVSSILI-- 422
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
K I + KLL+ +G + D + S ++A G
Sbjct: 423 --KAECISQGAKLLKKACLQGHEPDSKSLLSILDAYETTG 460
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 140/303 (46%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
++ D+ K+G FE +K + MKE G L + IY S+I + E + E E
Sbjct: 699 LMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERA 758
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G D + L+LMY G +KT++V S+ A L+ ++ ++ +S+
Sbjct: 759 GFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEG 818
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+ ++ +G P +Y S++ A + L+ +AE++F E++ KG+ Y ++ +
Sbjct: 819 FTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKI 878
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
Y A L+A MK G EP + + LM +G A + + EK+ ++ +
Sbjct: 879 YRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVS 938
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+ Y+TV +AY + ++++ + E + +G D + + S + + + LL
Sbjct: 939 TLPYSTVFNAYLKNGDYNLGITKLLEMKADGVKPDHQVWTCFIRAASLCERTADAILLLN 998
Query: 564 DMK 566
++
Sbjct: 999 SLR 1001
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 211/491 (42%), Gaps = 17/491 (3%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV-ASCVRARKFKIA 171
+RP+ + ++++ L + ++D I ++ +D ++ + S L+ A C+ +
Sbjct: 376 YRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVSSILIKAECISQGAKLLK 435
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
LQ D + +LL+ A K S + + + L S C ++
Sbjct: 436 KACLQGHEPDSK-SLLSILDAYETTGKHEEGLSLLQFIREHVPSSCNLISECSIMLLCKN 494
Query: 232 YKIGDS--EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
KI + E + L+C S D ++Y+ L L ++ EA + F DM+ G
Sbjct: 495 QKIAAAMQEYSSMQMLKCGSFGQD-----CNLYEYLITCLEEAEFFPEASQVFSDMQFIG 549
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM-LRDPEVCLKLVLMYIEEGLVEKT 348
I IY S+I ++ + + A +L EA + G+ L + ++ Y + L +
Sbjct: 550 IEPSRKIYESMISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTMIEAYGKIKLWQHA 609
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+ V+ +K I I A+++ +++ Y A V++ +I +G +P T S+
Sbjct: 610 ENFVKGLKQEP-SIDRRIWNALIHAYAESGLYEHARAVFDIMIEKGPLP---TIDSVNGM 665
Query: 409 YCRIALYSKAEKVFI---EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
+ + + +++++ E+Q GF M+ + K G I + M + MK G
Sbjct: 666 MRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGY 725
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
PN+ IY S++ + R K R VE + EMER PD T++ Y FD V+
Sbjct: 726 LPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVE 785
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
Y+ G + ++ ++S+ + EE LL +M +G Y S + A
Sbjct: 786 VYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASG 845
Query: 586 DAGLQMQAQWL 596
A L QA+ L
Sbjct: 846 KAKLWEQAEQL 856
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 110/561 (19%), Positives = 232/561 (41%), Gaps = 48/561 (8%)
Query: 74 QTAVPDAKKFDSFLHGMLKD----PQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
Q PD F++ ++ K P + A+D E +++ RP+ T LI Q
Sbjct: 92 QELEPDLVSFNTLINARAKSGCLAPGS---AFDLLLEVRQVG-LRPDVITYNTLISACSQ 147
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLA 188
D V++ E+ PD T + +V+ R K + A + + + G + +
Sbjct: 148 GSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVT 207
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+NS + + K + V E++ AG D Y ++ Y K+G + L+ E
Sbjct: 208 YNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEM- 266
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
R L TP + Y +L DSLGK R +A K +M + G+ +++LIC++A
Sbjct: 267 -RALGCTPDAV-TYTVLIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALICAYAKGG 324
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ A F G+ D L ++ + G + K + + ++M N + + +
Sbjct: 325 RREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDGYRPDNALYQ 384
Query: 369 AIVNGFSKRRGY--------------------WAAVKVYEQLISQG-------CI----P 397
++ +K Y +++ + + ISQG C+ P
Sbjct: 385 VMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVSSILIKAECISQGAKLLKKACLQGHEP 444
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
+ SI++AY + + + +++ C + + + K +I AM
Sbjct: 445 DSKSLLSILDAYETTGKHEEGLSLLQFIREHVPSSCNLISECSIMLLCKNQKIAAAMQEY 504
Query: 458 AKMKAKGCEP---NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ M+ C + +Y L+ A+ + +++ +M+ + P + Y ++ISAY
Sbjct: 505 SSMQMLKCGSFGQDCNLYEYLITCLEEAEFFPEASQVFSDMQFIGIEPSRKIYESMISAY 564
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGI-MVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ + + +E +G ++ + + M+ + K+ + ++ +K E + +D
Sbjct: 565 CKLGFPETAHQLMDEAVQSGISLNILSSRVTMIEAYGKIKLWQHAENFVKGLKQEPS-ID 623
Query: 574 ERLYHSAMNALRDAGLQMQAQ 594
R++++ ++A ++GL A+
Sbjct: 624 RRIWNALIHAYAESGLYEHAR 644
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V +++M+ +Y ++GR D L+ M+ + EP++ +N+L++ ++ L
Sbjct: 63 VQVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDL 122
Query: 494 EMERRKVT--PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+E R+V PD ++Y T+ISA ++ D V + E + D MV V +
Sbjct: 123 LLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGR 182
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ ++ ++ +++ +G K D Y+S + A G
Sbjct: 183 CGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEG 219
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 147/323 (45%), Gaps = 10/323 (3%)
Query: 273 GRAFEALKFFRDMKEKG-ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
GR AL+ R+M+E+G I D YA+LI + I ++ A ++F E +G + V
Sbjct: 161 GRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAV 220
Query: 332 CLK-LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
L+ Y + G ++ L E M + ++ +V+ A V E++
Sbjct: 221 MYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEM 280
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
G P TY +IN YC+ KA +VF EM +KG V Y+S++ + + G++
Sbjct: 281 QRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQV 340
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
++ L KG P+V +YN+L++ H ++ + ++ EME++++ PD V+Y T+
Sbjct: 341 QETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTL 400
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
I + D +E G D + K Q ++ L+++M +G
Sbjct: 401 IRGFCLLGRLDEARGLIDEMTKRGIQPDLGLC--------KNGQGDDAENLMKEMVGKGI 452
Query: 571 KLDERLYHSAMNALRDAGLQMQA 593
D+ Y S + L QM A
Sbjct: 453 TPDDSTYISLIEGLTTVDEQMSA 475
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 153/334 (45%), Gaps = 11/334 (3%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKS-AGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+ +N+ + G+ + + V +M+ GI D Y ++ + KIG E A +F
Sbjct: 148 VTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFD 207
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E ++ + P S MY L G+ AL++ DM ++G+ + Y L+ +
Sbjct: 208 EMLTQG-EVAP-SAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALF 265
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
A + +E + G+ D L+ Y +EG +K L+V E M ++ +
Sbjct: 266 MDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAV 325
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
+++ FS++ ++++ + +G P V Y ++IN++C +A ++ EM
Sbjct: 326 TYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEM 385
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
++K V Y++++ + GR+ +A L+ +M +G +P++ + +G+ +
Sbjct: 386 EKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDLGLCK-----NGQGDD- 439
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
E L KEM + +TPD +Y ++I E
Sbjct: 440 --AENLMKEMVGKGITPDDSTYISLIEGLTTVDE 471
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 47/237 (19%)
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF---DKCVVAYSSMVAMYG 445
+L+ Q P VTY ++I +C A +V EM+++G DK Y+++++ +
Sbjct: 137 ELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDK--YTYATLISGWC 194
Query: 446 KTGRIRDAMWLVAKMKAKG-CEPNVWIYNSLMD--------------------------- 477
K GR+ DA + +M +G P+ +YN+L+
Sbjct: 195 KIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTV 254
Query: 478 -----------MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
M GRA + V +EM+R ++PD +Y +I+ Y + ++
Sbjct: 255 ATYNLLVHALFMDGRASDAYAV---LEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEV 311
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ E G ++ FS+ Q++E +L + +G + D +Y++ +N+
Sbjct: 312 FEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINS 368
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 104/270 (38%), Gaps = 6/270 (2%)
Query: 65 IELNRDSHHQTAV-PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLL 123
+E+ R+ + + PD + + + G K + ++ A ++E E P L
Sbjct: 167 LEVMREMRERGGIAPDKYTYATLISGWCKIGRMED-AAKVFDEMLTQGEVAPSAVMYNAL 225
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG- 182
I K D + ED V T + LV + + A +L+ +G
Sbjct: 226 IGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGL 285
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ +N + GY K + V+E+M G+ + Y ++ A+ + G ++
Sbjct: 286 SPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDR 345
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
LF + + MY L +S G A + +M++K I D Y +LI
Sbjct: 346 LFKVAVKKGIRP---DVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIR 402
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVC 332
F + + A L E ++G+ D +C
Sbjct: 403 GFCLLGRLDEARGLIDEMTKRGIQPDLGLC 432
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 200/492 (40%), Gaps = 92/492 (18%)
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL 186
LV+SK + +++SLS+ + + P+ C N L+ F G I
Sbjct: 96 LVKSKHYHTVLSLSQKMEFRGIKPNLFNC----------------NILIYCFCQLGLIPC 139
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF-- 244
++H + L ++K+ + G LD Y ++ K+G++ L
Sbjct: 140 -----------QIHQAF---LFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQR 185
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
++ K +L++ ++T +Y + K +A + +M KGI + Y++LI F
Sbjct: 186 VDGKLVQLNAVMYNTVIY-----GMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 240
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ ++K A +LF + ++E++K +
Sbjct: 241 FVVGKLKDAIDLFNKI------------------------------ILENIKPDGYTFN- 269
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+V+GF K R V+ ++ QG IP VTY S+++ YC + + A+ +F
Sbjct: 270 ----ILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNT 325
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M Q G + + +Y+ ++ + K ++ AM L +M K PNV YNSL+D ++
Sbjct: 326 MAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGR 385
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF-------------- 530
+ +L +M R V P+ ++Y ++I A + + D + +F
Sbjct: 386 ISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTI 445
Query: 531 ------RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ G I +M+ F K +E + LL MK + Y + +L
Sbjct: 446 LIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSL 505
Query: 585 RDAGLQMQAQWL 596
D +A+ L
Sbjct: 506 LDNNENDKAEKL 517
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 152/354 (42%), Gaps = 23/354 (6%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVS 138
+A +++ ++GM KD + A+D Y+E P T LI K +
Sbjct: 194 NAVMYNTVIYGMCKDKHVND-AFDLYSEMVS-KGISPNVVTYSALISGFFVVGKLKDAID 251
Query: 139 LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYN 197
L + N+ PD +T + LV + RK K T+ + + G I ++ +NS M GY
Sbjct: 252 LFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYC 311
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
+ + ++ M G+ D Y ++ + KI +K LF E + +
Sbjct: 312 LVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVV 371
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ Y L D L KSGR AL+ M ++G+ + Y S+I + +V A L
Sbjct: 372 T---YNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALI 428
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVE-KTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ +++G+ P + +L+ +GL + + D+ + N +++GF K
Sbjct: 429 TKFKDQGI--QPSMYTYTILI---DGLCKVEGYDITVNTYNV-----------MIHGFCK 472
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+ + A+ + ++ CIP VTY I + KAEK+F EM +G
Sbjct: 473 KGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGL 526
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 100/257 (38%), Gaps = 25/257 (9%)
Query: 74 QTAVPDAKKFDSFLHG--MLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSK 131
Q +PD ++S + G ++K+ T + ++ + P+ R + +LI + K
Sbjct: 294 QGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIR----SYNILINGFCKIK 349
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFN 190
K D ++L + N++P+ T + L+ ++ + A L+ G +L +N
Sbjct: 350 KVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYN 409
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
S + K H I + K K GI Y +++ CK
Sbjct: 410 SIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGL---------------CKVE 454
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
D T + Y ++ K G EAL MK+ + + Y I S E
Sbjct: 455 GYDIT---VNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNEN 511
Query: 311 KLAEELFKEAEEKGMLR 327
AE+LF+E +G+L
Sbjct: 512 DKAEKLFREMITRGLLN 528
>gi|147841962|emb|CAN63129.1| hypothetical protein VITISV_001456 [Vitis vinifera]
Length = 701
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 179/397 (45%), Gaps = 28/397 (7%)
Query: 179 ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE 238
+T+ E ALLAF G + K ++K + V+ Y ++ + K + +
Sbjct: 153 MTNPETALLAF----GFFRK------------RLKPSREVI---LYNVTLKVFRKCRNLD 193
Query: 239 KVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
LF E R K D+ FST + SL +A+++F M E G D
Sbjct: 194 XAEKLFDEMLERGVKPDNITFSTIISCARVSSLPN-----KAVEWFEKMPEFGCHPDDVT 248
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y+++I ++ V +A +L+ A + DP L+ +Y G + L+V E MK
Sbjct: 249 YSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMK 308
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+K + I +++ + + W A +Y+++ + G TYA+++ AY R
Sbjct: 309 ALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQLSWGTYAALLRAYGRARYAE 368
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG-CEPNVWIYNSL 475
A V+ EM++KG + VV Y++++AM G +A + MK+ G C P+ W ++SL
Sbjct: 369 DALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSL 428
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ ++ + + + E + M P+ T++I Y +A D V+ ++
Sbjct: 429 ITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDI 488
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
D G M+ V ++ S EEL KL+ + KL
Sbjct: 489 TPDDRFCGCMLNVMTQ-SPKEELGKLIDCIDKANPKL 524
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 116/227 (51%), Gaps = 5/227 (2%)
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
+K + S ISCA V+ + AV+ +E++ GC P VTY+++I+AY R
Sbjct: 207 VKPDNITFSTIISCARVSSLPNK-----AVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGN 261
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
A K++ + + + V +S+++ +YG +G + + +MKA G +PN+ IYN+
Sbjct: 262 VDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNT 321
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L+D GRAK Q + ++KEM + +Y ++ AY RAR + + Y E + G
Sbjct: 322 LLDAMGRAKRPWQAKNIYKEMTNNGLQLSWGTYAALLRAYGRARYAEDALIVYKEMKEKG 381
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ + ++ + + + EE + +DMKS G + + S++
Sbjct: 382 LELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSL 428
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 79/166 (47%)
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
AEK+F EM ++G + +S++++ + A+ KM GC P+ Y++++D
Sbjct: 195 AEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMID 254
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+GRA N+ KL+ K D V+++T+I Y + FD C+ Y E + G
Sbjct: 255 AYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKP 314
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ I ++ + + + + ++M + G +L Y + + A
Sbjct: 315 NLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQLSWGTYAALLRA 360
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V+ Y+ + ++ K + A L +M +G +P+ +++++ R +L W
Sbjct: 176 VILYNVTLKVFRKCRNLDXAEKLFDEMLERGVKPDNITFSTIISC-ARVSSLPNKAVEWF 234
Query: 494 E-MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
E M PD V+Y+ +I AY RA DM +K Y+ R ID ++ ++
Sbjct: 235 EKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMS 294
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ + + ++MK+ G K + +Y++ ++A+ A QA+
Sbjct: 295 GNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAK 336
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 173/383 (45%), Gaps = 10/383 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ M S G+ + + +M+A + + + L + K P ++ +Y+ L D
Sbjct: 197 VFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRD--MTKHGCVP-NSMIYQTLID 253
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+L K R EALK +M G D + + ++I F + V +L KG
Sbjct: 254 ALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTP 313
Query: 328 DPEVCLKLVLMYIEEGLVEKT-LDVVESMKNAKLKISDCISCAIVNGFSKR-RGYWAAVK 385
+ + Y+ GL + +D +++ + + +VNGF + R A
Sbjct: 314 N-----DMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAF 368
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
VY+++I+ G +P T+++++N C+ L+ A ++ +M KG + Y+ ++ +
Sbjct: 369 VYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFC 428
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K G++ +A ++ +M KG N YN+L+ + + + ++ EM + PD
Sbjct: 429 KKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIF 488
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
++ ++I R E + + Y + + G + + ++ F + +I+E +KL+ DM
Sbjct: 489 TFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDM 548
Query: 566 KSEGTKLDERLYHSAMNALRDAG 588
G LDE Y+ + AL G
Sbjct: 549 LFRGCPLDEITYNGLIKALCKTG 571
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 191/444 (43%), Gaps = 13/444 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F++ ++G + + E A + L F P T L+ L ++ + D
Sbjct: 278 PDVNTFNTVIYGFCRLNRVLEGAK--LVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQ 335
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIA-LLAFNSAMGG 195
+L NV+ H + LV VR + A + I +G + + F++ + G
Sbjct: 336 ALLSKVPGPNVV---HF-NTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNG 391
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K ++ S + + M + G + Y +++ + K G E+ + E ++
Sbjct: 392 LCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFS-- 449
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+T Y L +L K G+ EAL F +M KG D + SLI + E++ A
Sbjct: 450 -LNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALA 508
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L+++ +G++ + L+ ++ G +++ L +V M + + ++
Sbjct: 509 LYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALC 568
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K + ++E++I +G P +T +IN +C A + +M +GF +V
Sbjct: 569 KTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIV 628
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+S++ K GRI++A+ L K++A+G +P+ YN+L+ R L
Sbjct: 629 TYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRG 688
Query: 496 ERRKVTPDKVSYTTVISAYNRARE 519
P+ V++ ++ YN ++
Sbjct: 689 VENGFVPNDVTWNILV--YNFGKQ 710
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/467 (19%), Positives = 201/467 (43%), Gaps = 9/467 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T L+++ L + D+ L D + +P++ L+ + + + A L
Sbjct: 208 PNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKL 267
Query: 175 LQ-VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ +F+ + FN+ + G+ +L+ + ++M G + Y +M K
Sbjct: 268 LEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCK 327
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD-MKEKGILE 292
++ AL + P H + L + ++GR EA F D M G +
Sbjct: 328 TCRIDEAQALLSKVPG------PNVVH-FNTLVNGFVRNGRLNEATAFVYDKMINNGYVP 380
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
D +++L+ A EL + + KG + L+ + ++G +E+ ++
Sbjct: 381 DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLIL 440
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
M ++ A+++ K A+ ++ ++ S+GC P T+ S+I CR+
Sbjct: 441 REMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRV 500
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
A ++ +M +G V +++++ + + G I++A+ LV M +GC + Y
Sbjct: 501 DEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITY 560
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N L+ + + + L++EM R+ +TP ++ +I+ + A + ++F +
Sbjct: 561 NGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIH 620
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
G D ++ K +I+E + L + +++EG + D Y++
Sbjct: 621 RGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNT 667
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 171/410 (41%), Gaps = 13/410 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + +HG+ K + E K+P P L+ V++ + +
Sbjct: 313 PNDMTYGYLMHGLCKTCRIDEAQA----LLSKVPG--PNVVHFNTLVNGFVRNGRLNEAT 366
Query: 138 SLSEDFKIYN-VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+ D I N +PD T S LV + F A L+ G + L + + G
Sbjct: 367 AFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDG 426
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K L+ +M + G L++ Y ++ A K G + +F E S+
Sbjct: 427 FCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPD 486
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
F+ + L L + +AL +RDM +G++ + + +LI +F E++ A +
Sbjct: 487 IFT---FNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALK 543
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNGF 374
L + +G D L+ + G VEK L + E M L S I+C I +NGF
Sbjct: 544 LVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPS-IITCNILINGF 602
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
A++ +I +G P VTY S+IN C+ +A +F ++Q +G
Sbjct: 603 CTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDS 662
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+ Y++++ + G DA +L+ + G PN +N L+ G+ N
Sbjct: 663 ITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSN 712
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/357 (19%), Positives = 141/357 (39%), Gaps = 48/357 (13%)
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
+KG S+Y LI + K+ + L + +E+G++ + + ++ Y GL
Sbjct: 97 QKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPG 156
Query: 347 KTLDVVESMKNA-----KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
+ ++ MK + + + +V G A V+ ++S+G P T
Sbjct: 157 QATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPS----VASNVFYDMLSKGVSPNDYT 212
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ ++ A C + A + +M + G + Y +++ K R+ +A+ L+ +M
Sbjct: 213 FGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMF 272
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY-------------- 507
GC P+V +N+++ R + + KL M + TP+ ++Y
Sbjct: 273 LMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRID 332
Query: 508 -----------------TTVISAYNRAREFDMCVKF-YNEFRMNGGVIDRAIAGIMVGVF 549
T+++ + R + F Y++ NG V D +V
Sbjct: 333 EAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGL 392
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA------LRDAGLQMQAQWLQQNF 600
K ++L+ DM ++G K + Y ++ L +AGL ++ + L + F
Sbjct: 393 CKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILR-EMLTKGF 448
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 150/332 (45%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S Y ++ D L K G + + F M+E G+ D Y SLI + + ++ LF
Sbjct: 229 SVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLF 288
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E ++ G + D L+ Y + + + + MKN LK + +++ F K
Sbjct: 289 NEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKE 348
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A+K+ + G +P + TY S+I+A C+ ++A K+ +M Q G +V Y
Sbjct: 349 GMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTY 408
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++++ K GR+ +A + M G PN +Y +L+ + +A+ + K+ K+M
Sbjct: 409 TALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 468
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ PD + Y ++I + R+ + E + G + I+ ++ + K + +
Sbjct: 469 CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSD 528
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ Q+M+ G + Y ++ L +AG+
Sbjct: 529 ALNFFQEMQDVGVEATIVTYCVLIDGLCEAGI 560
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 196/453 (43%), Gaps = 4/453 (0%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T LI + + + SL + K +PD T + L+ + K A
Sbjct: 263 PDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEY 322
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+G + ++ +++ + + K M I + M+ G++ + Y +++A K
Sbjct: 323 FSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCK 382
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G+ + L + + Y L D L K+GR EA + FR M + GI +
Sbjct: 383 AGNLTEAWKLLNDMLQA---GVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPN 439
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+Y +L+ + ++ A ++ K+ E + D + ++ + + +E+T ++E
Sbjct: 440 QQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILE 499
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
MK+ + + IS I++ + K A+ ++++ G VTY +I+ C
Sbjct: 500 EMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAG 559
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ A F M G V Y+S++ I A L +M+ +G P++ +
Sbjct: 560 IVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFT 619
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+L+D + + NL++ L M + D YT+++S +++ E KF+NE
Sbjct: 620 ALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEK 679
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
G + + + ++ + K Q++E ++L +M+
Sbjct: 680 GILPEEVLCICLLREYYKRGQLDEAIELKNEME 712
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 127/258 (49%), Gaps = 2/258 (0%)
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCA-IVNGFSKRRGYWAAVKVYEQLISQGCI 396
+++E GL+E+ + M+N + + SC +++ SK K + +I G
Sbjct: 169 VFVELGLLEEANECFSRMRNFR-TLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIA 227
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P TY +I+ C+ + ++F++M++ G VV Y+S++ YGK G + + L
Sbjct: 228 PSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASL 287
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+MK GC P++ YN L++ + + + + + + + EM+ + P+ V+Y+T+I A+ +
Sbjct: 288 FNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCK 347
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+K + R G + + ++ K + E KLL DM G KL+
Sbjct: 348 EGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 407
Query: 577 YHSAMNALRDAGLQMQAQ 594
Y + ++ L AG ++A+
Sbjct: 408 YTALLDGLCKAGRMIEAE 425
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 166/372 (44%), Gaps = 5/372 (1%)
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFE 277
V SG + + + ++G E+ F + R + P L L KSG
Sbjct: 157 VSGSGVFDVLFSVFVELGLLEEANECF--SRMRNFRTLP-KARSCNFLLHRLSKSGNGQL 213
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
KFF DM GI Y +I +++ + LF + E G+ D L+
Sbjct: 214 VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLID 273
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
Y + G +E+ + MK+ + D I+ ++N + K A + + ++ + G
Sbjct: 274 GYGKVGSLEEVASLFNEMKDVGC-VPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLK 332
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P VTY+++I+A+C+ + A K+ +M++ G Y+S++ K G + +A L
Sbjct: 333 PNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKL 392
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ M G + N+ Y +L+D +A + + E++++ M + ++P++ YT ++ Y +
Sbjct: 393 LNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIK 452
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
A + +K + D + G ++ ++EE +L++MKS G + +
Sbjct: 453 AERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVI 512
Query: 577 YHSAMNALRDAG 588
+ ++A AG
Sbjct: 513 STTIIDAYFKAG 524
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 136/283 (48%), Gaps = 6/283 (2%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTIL 207
P+ + LV ++A + + A +L+ +T+ I L+ + S + G+ T L
Sbjct: 438 PNQQVYTALVHGYIKAERMEDAMKILKQ-MTECNIKPDLILYGSIIWGHCSQRKLEETKL 496
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ E+MKS GI + I++AY+K G S F E + +++T + Y +L D
Sbjct: 497 ILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVT---YCVLID 553
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L ++G A+ +F M G+ + ++Y SLI ++ A++LF E + +GM
Sbjct: 554 GLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTP 613
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ ++ G +++ L ++ M ++ + ++V+GFS+ A K +
Sbjct: 614 DITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFF 673
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++I +G +P +V ++ Y + +A ++ EM++ +
Sbjct: 674 NEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMAY 716
>gi|410110065|gb|AFV61112.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
citrodora]
Length = 435
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 156/326 (47%), Gaps = 3/326 (0%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 2 GLFDEMRERALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLI 58
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A +F + G D ++ ++ + L + ++ MK A +
Sbjct: 59 ELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVM 118
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++ + + + + A+ V+ ++ C+ T +I+ Y ++ + +A+K+
Sbjct: 119 PNTASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M++ G + VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G+
Sbjct: 179 FWGMRKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 238
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ +
Sbjct: 239 TLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVL 298
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKS 567
M+ + + + +LL ++KS
Sbjct: 299 YQTMIVAYERAGLVAHAKRLLHELKS 324
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 151/319 (47%), Gaps = 6/319 (1%)
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
F +M+E+ + D Y++LI F A ++ E+ + D + L+ +
Sbjct: 3 LFDEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 62
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ K + + +K + A++N F K + + A + ++ + G +P
Sbjct: 63 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTA 122
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS---MVAMYGKTGRIRDAMWLV 457
+Y++++ Y + +A VF EM++ KC++ ++ M+ +YG+ G ++A L
Sbjct: 123 SYSTLLTMYVENKKFIEALSVFSEMREI---KCLLDLTTCNIMIDVYGQLGMAKEADKLF 179
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
M+ G E NV YN+L+ ++G A+ + L++ M+R+ + + V+Y +++ Y +
Sbjct: 180 WGMRKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 239
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
E + E + G + ++ ++ K+ +++ L Q ++S G ++D+ LY
Sbjct: 240 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLY 299
Query: 578 HSAMNALRDAGLQMQAQWL 596
+ + A AGL A+ L
Sbjct: 300 QTMIVAYERAGLVAHAKRL 318
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 167/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F+ + Y + +
Sbjct: 40 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKRSGFTPDLVAYNAMIN 94
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +MK G++ + + Y++L+ + + A +F E E L
Sbjct: 95 VFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVENKKFIEALSVFSEMREIKCLL 154
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 155 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIETNVVSYNTLLRVYGDAELFGEAIHLF 214
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 215 RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV 274
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + +Y +++ + RA + ++L E++ +PD +
Sbjct: 275 GKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----SPDNIPR 330
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ +FSK + V++ M+
Sbjct: 331 DTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANAVEVFDKMRG 390
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 391 LGYFPDSNVIALVLNA 406
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 161/353 (45%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +MK+AG++ ++ Y ++ Y + + ++F
Sbjct: 86 LVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVENKKFIEALSVFS 145
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 146 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIETNVVSYNTLLRV 200
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 201 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 260
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 261 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLH 320
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+ K D + + + + GRI +A ++ + G ++ ++ ++ + + K
Sbjct: 321 EL--KSPDN--IPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYK 376
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+++ +M PD V++AY + E D Y E + G V
Sbjct: 377 KYANAVEVFDKMRGLGYFPDSNVIALVLNAYGKLHELDKANDVYMEMQEVGCV 429
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 141/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 119 PNTASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 179 FWGMRKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 238
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 239 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 295
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + ++I G +E+ V
Sbjct: 296 QVLYQTMIVAYERAGLVAHAKRLLHE------LKSPDNIPRDTAIHILAGAGRIEEATYV 349
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y AV+V++++ G P A ++NAY +
Sbjct: 350 FRQAIDAGEVKDITVFERMIHLFSKYKKYANAVEVFDKMRGLGYFPDSNVIALVLNAYGK 409
Query: 412 IALYSKAEKVFIEMQQKG 429
+ KA V++EMQ+ G
Sbjct: 410 LHELDKANDVYMEMQEVG 427
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 87/195 (44%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 245 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIV 304
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E KS D+ P T ++ L +GR EA FR + G
Sbjct: 305 AYERAGLVAHAKRLLHELKSP--DNIPRDTAIH-----ILAGAGRIEEATYVFRQAIDAG 357
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + A E+F + G D V ++ Y + ++K
Sbjct: 358 EVKDITVFERMIHLFSKYKKYANAVEVFDKMRGLGYFPDSNVIALVLNAYGKLHELDKAN 417
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 418 DVYMEMQEVGCVFSD 432
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 179/413 (43%), Gaps = 20/413 (4%)
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
+ L ++R L +K +++ K P A + ++ + +++ + L
Sbjct: 160 TELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNE 219
Query: 178 FITDGEI--ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG 235
T+G + +++ + + KL S I + +MK G+ + Y ++ ++K+
Sbjct: 220 MSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLN 279
Query: 236 DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
D +LF E + + F+ Y L LGK+GR EA FF +M+ +G D
Sbjct: 280 DVHGALSLFEEMRHQYCRPDVFT---YTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTI 336
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVE------K 347
+ ++I + A +LF+E G LR C+ V+ Y I + L E +
Sbjct: 337 VMNNMINFLGKAGRLDDAMKLFQEM---GTLR----CIPSVVTYNTIIKALFESKSRASE 389
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
E MK + + S +++GF K A+ + E++ +G P Y S+I+
Sbjct: 390 VPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLID 449
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
A + Y A ++F E+++ Y+ M+ GK GR+ DA+ + +M GC P
Sbjct: 450 ALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAP 509
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+V+ YN+LM R L + + M+ PD SY +++ + +
Sbjct: 510 DVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLQKQEDL 562
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 153/353 (43%), Gaps = 5/353 (1%)
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG-ILEDPSIY 297
K A+F + K+RK T Y + L G+ + + + +M +G D Y
Sbjct: 177 KAIAIFYQIKTRKCQPT---AQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTY 233
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++LI +F + A +L E ++ GM ++ LV ++ + V L + E M++
Sbjct: 234 SALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRH 293
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ ++ G K A + ++ +GC P + ++IN +
Sbjct: 294 QYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDD 353
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
A K+F EM VV Y++++ A++ R + +MK G P+ + Y+ L+
Sbjct: 354 AMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILI 413
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D + + + L +EM+ + P +Y ++I A +A+ +D+ + + E + N G
Sbjct: 414 DGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGS 473
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ +M+ K ++++ + + +M G D Y++ M+ L G+
Sbjct: 474 SSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGM 526
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 157/368 (42%), Gaps = 16/368 (4%)
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
G EKV L+ E S + P T Y L + K GR A++ +MK+ G+
Sbjct: 208 GQYEKVHELYNE-MSTEGHCFP-DTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTT 265
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
IY L+ F + +V A LF+E + D +L+ + G +++
Sbjct: 266 KIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYE 325
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
M+ + + ++N K A+K+++++ + CIP VTY +II A
Sbjct: 326 MQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKAL--FES 383
Query: 415 YSKAEKV---FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
S+A +V F M++ G YS ++ + KT R+ AM L+ +M KG P
Sbjct: 384 KSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAA 443
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y SL+D G+AK +L++E++ + Y +I +A D + ++E
Sbjct: 444 YCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMN 503
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
G D ++ ++ ++E + ++ M+ G D Y+ +N GLQ
Sbjct: 504 KLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILN-----GLQK 558
Query: 592 Q----AQW 595
Q QW
Sbjct: 559 QEDLIVQW 566
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 157/354 (44%), Gaps = 51/354 (14%)
Query: 279 LKFFR-DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL---- 333
++FFR K + D S Y +LI + + E++K +E M+R+P +C+
Sbjct: 107 MQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYG---EMWKMIQE--MVRNP-ICVVTPT 160
Query: 334 ---KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
++V M +V K + + +K K + + +++ Y ++Y ++
Sbjct: 161 ELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEM 220
Query: 391 ISQG-CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY----- 444
++G C P +TY+++I+A+C++ A ++ EM+ G Y+ +VA++
Sbjct: 221 STEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLND 280
Query: 445 ------------------------------GKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
GK GRI +A +M+ +GC P+ + N+
Sbjct: 281 VHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNN 340
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+++ G+A L KL++EM + P V+Y T+I A ++ V + E
Sbjct: 341 MINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 400
Query: 535 GVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
G+ + I++ F K +++E+ + LL++M +G Y S ++AL A
Sbjct: 401 GISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 454
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 120/278 (43%), Gaps = 9/278 (3%)
Query: 53 FFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE 112
FF++N + L + HQ PD + + G+ K + E AY ++ E ++
Sbjct: 275 FFKLNDVHG--ALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDE-AYHFFYEMQR-EG 330
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCV--RARKFKI 170
RP+ + +I +L ++ + D + L ++ +P T + ++ + ++R ++
Sbjct: 331 CRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEV 390
Query: 171 ANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ ++ + + ++ + G+ K + +++ E+M G YC +++A
Sbjct: 391 PSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDA 450
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K + LF E K S S+ +Y ++ LGK+GR +A+ F +M + G
Sbjct: 451 LGKAKRYDLACELFQELKENCGSS---SSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGC 507
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
D Y +L+ A + A + +E G + D
Sbjct: 508 APDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD 545
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 184/417 (44%), Gaps = 10/417 (2%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA----RKFKIANTLLQV 177
+LI L + K+ + L ++ +LP T + L+ +A + FK+ +
Sbjct: 219 VLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKAD 278
Query: 178 FITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
I E +L+ FN+ + G K M V ++MK G V D+ + + + Y +
Sbjct: 279 HI---EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY---SSN 332
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
EK A ++ + + IL ++L K G+ +A + KG++ + IY
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++I + ++ A + E++GM D L+ + E G +E V MK
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ S ++ G+ ++ + + +++ G +P V+Y ++IN C+ + +
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A+ V +M+ +G V Y+ ++ G+I DA +M KG E N+ YN+L+D
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L + E L E+ R+ + PD +Y ++IS Y A C+ Y E + +G
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/483 (20%), Positives = 206/483 (42%), Gaps = 20/483 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVS-----LSEDFKIYNVLPDAHTCSRLVASCVR----A 165
P +L LL+ +LV++K++ ++ L DF+ P + + + V+
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFR-----PSKFMYGKAIQAAVKLSDVG 196
Query: 166 RKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
+ ++ N + I ++ +N + G K ++++M + ++ Y
Sbjct: 197 KGLELFNRMKHDRIYP---SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYN 253
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+++ Y K G+ EK F + K D S + L L K+G +A ++M
Sbjct: 254 TLIDGYCKAGNPEKS---FKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM 310
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
K+ G + D ++ L ++S + + A +++ A + G+ + C L+ +EG +
Sbjct: 311 KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKI 370
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
EK +++ L ++ I +++G+ ++ A E + QG P + Y +
Sbjct: 371 EKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCL 430
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
I +C + AEK +M+ KG V Y+ ++ YG+ ++ +M+ G
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
PNV Y +L++ + L + + + ++ME R V+P Y +I + + +
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
F E G ++ ++ S ++ E LL ++ +G K D Y+S ++
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 586 DAG 588
AG
Sbjct: 611 FAG 613
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 164/382 (42%), Gaps = 46/382 (12%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y + ++A K+ D K LF K ++ + F +Y +L D L K R +A + F
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVF---IYNVLIDGLCKGKRMNDAEQLFD 238
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE-KGMLRDPEVCLKLVLM--YI 340
+M + +L Y +LI + E+ FK E K +P + L+
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGN---PEKSFKVRERMKADHIEPSLITFNTLLKGLF 295
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIV-NGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ G+VE +V++ MK+ + D + +I+ +G+S AA+ VYE + G
Sbjct: 296 KAGMVEDAENVLKEMKDLGF-VPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNA 354
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
T + ++NA C K G+I A ++ +
Sbjct: 355 YTCSILLNALC-----------------------------------KEGKIEKAEEILGR 379
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
AKG PN IYN+++D + R +L + ME++ + PD ++Y +I + E
Sbjct: 380 EMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGE 439
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ K N+ ++ G I++G + + + ++ +L++M+ GT + Y +
Sbjct: 440 MENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGT 499
Query: 580 AMNALRDAGLQMQAQWLQQNFE 601
+N L ++AQ ++++ E
Sbjct: 500 LINCLCKGSKLLEAQIVKRDME 521
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 160/357 (44%), Gaps = 21/357 (5%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+N +GGY + + + + ++M+ G + + Y ++ K S+ + A ++
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK--GSKLLEAQIVKR 518
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+P +Y +L D G+ +A +F ++M +KGI + Y +LI +
Sbjct: 519 DMEDRGVSP-KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++ AE+L E KG+ D L+ Y G V++ + + E MK + +K +
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCI-PGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
+++ +K +++ E+L + + P + Y +++ Y A++ EK F +Q
Sbjct: 638 HLLISLCTKE-----GIELTERLFGEMSLKPDLLVYNGVLHCY---AVHGDMEKAF-NLQ 688
Query: 427 QKGFDKCV----VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
++ +K + Y+S++ K G++ + L+ +M A+ EP YN ++ H
Sbjct: 689 KQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEV 748
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN---RAREFDMCVKFYNEFRMNGGV 536
K+ ++EM+ + D ++S R++E ++ + N RM G V
Sbjct: 749 KDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNG-RMLGDV 804
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 109/256 (42%)
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
L L ++ E ++ + D+ +++N + S +++ K + + + V+ ++
Sbjct: 113 LLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILE 172
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
P + Y I A +++ K ++F M+ V Y+ ++ K R+ D
Sbjct: 173 SDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMND 232
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A L +M A+ P++ YN+L+D + +A N + K+ + M+ + P +++ T++
Sbjct: 233 AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLK 292
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+A + E + G V D I+ +S + E + + + G K+
Sbjct: 293 GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKM 352
Query: 573 DERLYHSAMNALRDAG 588
+ +NAL G
Sbjct: 353 NAYTCSILLNALCKEG 368
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 166/382 (43%), Gaps = 5/382 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY +M S G+ Y +M A K DSE V L E + L ++ + I
Sbjct: 214 VYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYT---FTICIR 270
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
LG++G+ EA + FR M ++G D Y LI + + +++ A+ELF + + G
Sbjct: 271 VLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKP 330
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKV 386
D + + L+ + + G ++ T S A + D ++ I V+ K R + A
Sbjct: 331 DQVIYITLLDKFNDFGDLD-TFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFAT 389
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
++ + QG +P TY ++I R A K+ M+ G Y + + +GK
Sbjct: 390 FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGK 449
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
+G A+ KMKAKG PN+ N+ + LR+ + ++ + + PD V+
Sbjct: 450 SGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVT 509
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y ++ Y++ + D V +E NG D + ++ K +++E ++ MK
Sbjct: 510 YNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMK 569
Query: 567 SEGTKLDERLYHSAMNALRDAG 588
Y++ ++ L G
Sbjct: 570 DMKLSPTVVTYNTLLSGLGKEG 591
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/462 (20%), Positives = 196/462 (42%), Gaps = 47/462 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQE---LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
PD + L G++K Q + +A D+ + + FR +S + L+ + + D
Sbjct: 679 PDHVTICTLLPGLVKCGQIGDAISIARDFMYQVR----FRVNRSFWEDLMGGTLVEAEMD 734
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSA 192
+ +E+ + + + LV + ++ A + F I+ L ++N
Sbjct: 735 KAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCL 794
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+G ++H +++ MK+ G D+ + ++ + K G ++ L+ E SR+
Sbjct: 795 IGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRC 854
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
+ Y I+ SL KS +AL FF D+ P Y LI A + ++
Sbjct: 855 KPDAIT---YNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEE 911
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A LF+E + G K + I ++N
Sbjct: 912 AMRLFEEMSDYG-----------------------------------CKPNCAIFNILIN 936
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G+ K A +++++++++G P +Y +++ C +A F E++ G D
Sbjct: 937 GYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDP 996
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+AY+ ++ GK+ R+ +A+ L +M+ +G P+++ YNSLM G A + Q ++++
Sbjct: 997 DFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMY 1056
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+E++ + PD +Y +I Y+ + + Y ++G
Sbjct: 1057 EELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDG 1098
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 191/459 (41%), Gaps = 17/459 (3%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
RP T + IR L ++ K D + PD T + L+ + A + + A
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAK 317
Query: 173 TLLQVFITDGE-------IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
L +G I LL + G + ++S +M++ G + D +
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWS------QMEADGYMPDVVTFT 371
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+++ K D ++ A F RK P + H Y L L ++GR +ALK M
Sbjct: 372 ILVDVLCKARDFDEAFATF--DVMRKQGILP-NLHTYNTLICGLLRAGRIEDALKLLDTM 428
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+ G+ Y + I F E A E F++ + KG++ + C + E G +
Sbjct: 429 ESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRL 488
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+ + ++ L ++ +SK AV + ++I GC P + S+
Sbjct: 489 REAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSL 548
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
I++ + +A ++F M+ VV Y+++++ GK GR++ A+ L M K C
Sbjct: 549 IDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKC 608
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
PN +N+L+D + + K++ +M PD ++Y TVI + + +
Sbjct: 609 SPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFW 668
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
F+++ + + I ++ G+ K QI + + + +D
Sbjct: 669 FFHQLKKSMHPDHVTICTLLPGLV-KCGQIGDAISIARD 706
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 108/530 (20%), Positives = 224/530 (42%), Gaps = 15/530 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +S + + K + E A+ ++ K + + P T L+ L + + +
Sbjct: 540 PDVIVVNSLIDSLYKAGRVDE-AWQMFDRMKDM-KLSPTVVTYNTLLSGLGKEGRVQKAI 597
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGGY 196
L E P+ + + L+ + + ++A + ++ + D + +L +N+ + G
Sbjct: 598 ELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK---IGDSEKVAALFLECKSRKLD 253
K + + ++K + + D C ++ K IGD+ +A F+ +++
Sbjct: 658 IKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVN 716
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+ + M L ++ +A+ F ++ GI + S L+ A
Sbjct: 717 RSFWEDLMGGTLVEA-----EMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYA 771
Query: 314 EELFKEAEEKGMLRDPEVCLK-LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
++F + +K + L+ +E EK D+ + MKN D + ++
Sbjct: 772 YQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCA-PDAFTFNMLL 830
Query: 373 GFSKRRGYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G + ++Y+++IS+ C P +TY +I++ + KA F ++ F
Sbjct: 831 AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
Y ++ K GR+ +AM L +M GC+PN I+N L++ +G+ + +L
Sbjct: 891 PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+K M + PD SYT ++ A D + ++NE + G D ++ K
Sbjct: 951 FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
++EE + L +M++ G D Y+S M L AG+ QA+ + + +
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQ 1060
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 163/399 (40%), Gaps = 48/399 (12%)
Query: 84 DSFLHGMLKD--PQTQEL-AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ----SKKWDSI 136
DSFL +++ +EL AY +++ K P ++ LI L++ K WD
Sbjct: 752 DSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWD-- 809
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
L +D K PDA T N LL V G+I L
Sbjct: 810 --LFKDMKNVGCAPDAFT----------------FNMLLAVHGKSGKITEL--------- 842
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+Y++M S D+ Y ++ + K + +K F + S TP
Sbjct: 843 ---------FELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y L D L K GR EA++ F +M + G + +I+ LI + I + + A +L
Sbjct: 894 ---RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
FK +G+ D + LV G V++ L +K+ L I+NG K
Sbjct: 951 FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A+ +Y ++ ++G +P TY S++ + +A++++ E+Q G + V
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
Y++++ Y + A + M GC PN+ Y L
Sbjct: 1071 YNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/457 (19%), Positives = 192/457 (42%), Gaps = 38/457 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ ++G++K+ + A+ ++++ KK P+ T+ L+ LV+ + +
Sbjct: 645 PDVLTYNTVIYGLIKENKVNH-AFWFFHQLKK--SMHPDHVTICTLLPGLVKCGQIGDAI 701
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
S++ DF +Y V +F++ + + MGG
Sbjct: 702 SIARDF-MYQV------------------RFRVNRSF--------------WEDLMGGTL 728
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
I+ E++ GI + ++ K E A + ++KL +P
Sbjct: 729 VEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCK-HKRELYAYQIFDKFTKKLGISP- 786
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ Y L L + +A F+DMK G D + L+ ++ EL+
Sbjct: 787 TLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELY 846
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
KE + D ++ + ++K LD + ++ + + +++G +K
Sbjct: 847 KEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKV 906
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A++++E++ GC P + +IN Y +I A ++F M +G + +Y
Sbjct: 907 GRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSY 966
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+ +V GR+ +A++ ++K+ G +P+ YN +++ G+++ + + L+ EM
Sbjct: 967 TILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRN 1026
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
R + PD +Y +++ A + + Y E ++ G
Sbjct: 1027 RGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAG 1063
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 137/322 (42%), Gaps = 5/322 (1%)
Query: 87 LHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIY 146
L G L + E A+D + + K + P+ T +L+ +S K + L ++
Sbjct: 794 LIGELLEVHYTEKAWDLFKDMKNVG-CAPDAFTFNMLLAVHGKSGKITELFELYKEMISR 852
Query: 147 NVLPDAHTCSRLVASCVRARKF-KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYST 205
PDA T + +++S ++ K + + +D + + G K+
Sbjct: 853 RCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEA 912
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ ++E+M G + + ++ Y KIGD+E LF + + S Y IL
Sbjct: 913 MRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKS---YTIL 969
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
D L +GR EAL +F ++K G+ D Y +I ++ A L+ E +G+
Sbjct: 970 VDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1029
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ D L+L G+VE+ + E ++ A L+ A++ G+S A
Sbjct: 1030 VPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYT 1089
Query: 386 VYEQLISQGCIPGQVTYASIIN 407
VY+ ++ GC P TYA + N
Sbjct: 1090 VYKNMMVDGCNPNIGTYAQLPN 1111
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/485 (17%), Positives = 202/485 (41%), Gaps = 23/485 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T ++++ + + D V+L + PD + L+ S +A + A
Sbjct: 505 PDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA--- 561
Query: 175 LQVF--ITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
Q+F + D +++ ++ +N+ + G K I ++E M ++ + +++
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDC 621
Query: 231 YYKIGDSEKVAALF-----LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+ K + E +F ++CK D ++T +Y ++ K + A FF +
Sbjct: 622 FCKNDEVELALKMFSKMTVMDCKP---DVLTYNTVIYGLI-----KENKVNHAFWFFHQL 673
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR-DPEVCLKLVLMYIEEGL 344
K K + D +L+ ++ A + ++ + R + L+ + E
Sbjct: 674 K-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAE 732
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ-GCIPGQVTYA 403
++K + E + + D +V K + A +++++ + G P +Y
Sbjct: 733 MDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYN 792
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
+I + KA +F +M+ G ++ ++A++GK+G+I + L +M ++
Sbjct: 793 CLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISR 852
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
C+P+ YN ++ ++ NL + + ++ P +Y +I + +
Sbjct: 853 RCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEA 912
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++ + E G + AI I++ + K+ E +L + M +EG + D + Y ++
Sbjct: 913 MRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDC 972
Query: 584 LRDAG 588
L AG
Sbjct: 973 LCLAG 977
>gi|357480587|ref|XP_003610579.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511634|gb|AES92776.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 706
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 143/297 (48%), Gaps = 2/297 (0%)
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+A+++F M G D Y+ +I S+ ++ +A L+ A + +P L+
Sbjct: 234 KAVEWFEKMPLFGCEPDDVTYSVMIDSYGKAGDIDMALNLYDRARTEKWRIEPATFSTLI 293
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
MY G + L+V E MK +K + + +++ + + W A +Y+++I+ +
Sbjct: 294 KMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQARTIYKEMINNDIL 353
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TYAS+++AY R A V+ EM++K D Y+S++AM G A +
Sbjct: 354 PNRATYASLLHAYGRARFCEDALVVYREMREKEMDLNTHLYNSLLAMCADVGYTDLAFEI 413
Query: 457 VAKMKAKG-CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
MK+ C P+ W ++SL+ ++ + + + E++ EM P T+++ Y
Sbjct: 414 FEDMKSSDTCSPDSWTFSSLITIYSCSGRVSEAERMMNEMIESGFEPTIFVLTSLVQCYG 473
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+A+ D VK +N+ G D G ++ V ++ + EEL KL+ ++ KL
Sbjct: 474 KAKRTDDVVKTFNQLLDMGIEPDDRFCGCLLNVMTQTPK-EELGKLIDCVEKANPKL 529
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 49/275 (17%)
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
V + VL Y++ + T +V+ + N LK+ F K + A KV+ ++
Sbjct: 162 VVVPFVLQYVQRKSI-PTREVI--LYNVTLKV-----------FRKCKDLDGAEKVFGEM 207
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG-- 448
+ +G P VT+++II+ L KA + F +M G + V YS M+ YGK G
Sbjct: 208 LQRGVKPDNVTFSTIISCARSCYLPDKAVEWFEKMPLFGCEPDDVTYSVMIDSYGKAGDI 267
Query: 449 --------RIRDAMWLV-------------------------AKMKAKGCEPNVWIYNSL 475
R R W + +MKA G +PN+ +YN+L
Sbjct: 268 DMALNLYDRARTEKWRIEPATFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTL 327
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+D GRAK Q ++KEM + P++ +Y +++ AY RAR + + Y E R
Sbjct: 328 LDAMGRAKRPWQARTIYKEMINNDILPNRATYASLLHAYGRARFCEDALVVYREMREKEM 387
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
++ + ++ + + + + ++ +DMKS T
Sbjct: 388 DLNTHLYNSLLAMCADVGYTDLAFEIFEDMKSSDT 422
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 135/308 (43%), Gaps = 1/308 (0%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
A K F +M ++G+ D ++++I S A E F++ G D ++
Sbjct: 200 AEKVFGEMLQRGVKPDNVTFSTIISCARSCYLPDKAVEWFEKMPLFGCEPDDVTYSVMID 259
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
Y + G ++ L++ + + K +I ++ + Y + VYE++ + G P
Sbjct: 260 SYGKAGDIDMALNLYDRARTEKWRIEPATFSTLIKMYGVAGNYDGCLNVYEEMKALGVKP 319
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
V Y ++++A R +A ++ EM Y+S++ YG+ DA+ +
Sbjct: 320 NLVVYNTLLDAMGRAKRPWQARTIYKEMINNDILPNRATYASLLHAYGRARFCEDALVVY 379
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV-TPDKVSYTTVISAYNR 516
+M+ K + N +YNSL+ M +++++M+ +PD +++++I+ Y+
Sbjct: 380 REMREKEMDLNTHLYNSLLAMCADVGYTDLAFEIFEDMKSSDTCSPDSWTFSSLITIYSC 439
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ + NE +G + +V + K + +++VK + G + D+R
Sbjct: 440 SGRVSEAERMMNEMIESGFEPTIFVLTSLVQCYGKAKRTDDVVKTFNQLLDMGIEPDDRF 499
Query: 577 YHSAMNAL 584
+N +
Sbjct: 500 CGCLLNVM 507
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 113/262 (43%), Gaps = 6/262 (2%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+EKM G D Y ++++Y K GD + L+ ++ K P + + L
Sbjct: 239 FEKMPLFGCEPDDVTYSVMIDSYGKAGDIDMALNLYDRARTEKWRIEPAT---FSTLIKM 295
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
G +G L + +MK G+ + +Y +L+ + A ++KE +L +
Sbjct: 296 YGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQARTIYKEMINNDILPN 355
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVY 387
L+ Y E L V M+ ++ ++ + +++ GY A +++
Sbjct: 356 RATYASLLHAYGRARFCEDALVVYREMREKEMDLNTHLYNSLL-AMCADVGYTDLAFEIF 414
Query: 388 EQL-ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
E + S C P T++S+I Y S+AE++ EM + GF+ + +S+V YGK
Sbjct: 415 EDMKSSDTCSPDSWTFSSLITIYSCSGRVSEAERMMNEMIESGFEPTIFVLTSLVQCYGK 474
Query: 447 TGRIRDAMWLVAKMKAKGCEPN 468
R D + ++ G EP+
Sbjct: 475 AKRTDDVVKTFNQLLDMGIEPD 496
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 84/208 (40%), Gaps = 37/208 (17%)
Query: 389 QLISQGCIPGQ--VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
Q + + IP + + Y + + + AEKVF EM Q+G V +S++++
Sbjct: 169 QYVQRKSIPTREVILYNVTLKVFRKCKDLDGAEKVFGEMLQRGVKPDNVTFSTIISCARS 228
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
A+ KM GCEP D V+
Sbjct: 229 CYLPDKAVEWFEKMPLFGCEP-----------------------------------DDVT 253
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y+ +I +Y +A + DM + Y+ R I+ A ++ ++ + + + ++MK
Sbjct: 254 YSVMIDSYGKAGDIDMALNLYDRARTEKWRIEPATFSTLIKMYGVAGNYDGCLNVYEEMK 313
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ G K + +Y++ ++A+ A QA+
Sbjct: 314 ALGVKPNLVVYNTLLDAMGRAKRPWQAR 341
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 120/271 (44%), Gaps = 17/271 (6%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A + Y+ A+ ++R E +T LI+ + +D +++ E+ K V P+ +
Sbjct: 268 DMALNLYDRART-EKWRIEPATFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNT 326
Query: 158 LVASCVRARKFKIANTLLQVFITDGEIALLA-FNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+ + RA++ A T+ + I + + A + S + Y + ++VY +M+
Sbjct: 327 LLDAMGRAKRPWQARTIYKEMINNDILPNRATYASLLHAYGRARFCEDALVVYREMREKE 386
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL---DSTPFSTHMYKILCDSLGKSG 273
+ L++ Y ++ +G ++ +F + KS DS FS+ + C SG
Sbjct: 387 MDLNTHLYNSLLAMCADVGYTDLAFEIFEDMKSSDTCSPDSWTFSSLITIYSC-----SG 441
Query: 274 RAFEALKFFRDMKEKGILEDPSIY--ASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
R EA + +M E G +P+I+ SL+ + + F + + G+ D
Sbjct: 442 RVSEAERMMNEMIESGF--EPTIFVLTSLVQCYGKAKRTDDVVKTFNQLLDMGIEPDDRF 499
Query: 332 --CLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
CL V+ + + K +D VE N KL
Sbjct: 500 CGCLLNVMTQTPKEELGKLIDCVEK-ANPKL 529
>gi|326527817|dbj|BAJ88981.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 173/397 (43%), Gaps = 12/397 (3%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
RP + LIR L ++ + +L + + + PDA + L+ + ++A+
Sbjct: 83 MRPSAAAYARLIRALARAGRALEAEALLLEMRHLGLRPDAAHYNALLEGLLARAHLRLAD 142
Query: 173 TLLQVFITDGEIALLAFNSA-----MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
LL DG +A N + Y + + V +MK GI LD+ Y +
Sbjct: 143 RLLLQMADDG----VARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRWGIRLDTAGYSTL 198
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
+ Y G +K L +E + ++ +Y L D+ GK G+ +A K F M+
Sbjct: 199 VRLYRDSGMWKKATDLIMEMQEVGVE---LDVKIYNGLIDTFGKYGQLADARKMFEKMRG 255
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
+GI D + +LI + +K A +E+GM DP++ + ++ E+G ++
Sbjct: 256 QGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINKLGEQGKWDE 315
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
++ + M+N K S I +V+ + + + A + L ++ + + N
Sbjct: 316 LKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENLQLSPSIFCVLAN 375
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
AY + L + V M+ +G + +V + ++ + GR +A + +K G P
Sbjct: 376 AYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVFQHIKDSGMSP 435
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+V Y +LM R K +V +++ EMER TPD+
Sbjct: 436 DVVTYTTLMKAFMRVKRYEKVSEVYSEMERAGCTPDR 472
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 146/332 (43%), Gaps = 35/332 (10%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S Y L +L ++GRA EA +M+ G+ D + Y +L+ + ++LA+ L
Sbjct: 86 SAAAYARLIRALARAGRALEAEALLLEMRHLGLRPDAAHYNALLEGLLARAHLRLADRLL 145
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+ + G+ R+ + L+ Y G +E + V+ MK +++
Sbjct: 146 LQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRWGIRLD-------------- 191
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
Y++++ Y ++ KA + +EMQ+ G + V Y
Sbjct: 192 ---------------------TAGYSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIY 230
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+ ++ +GK G++ DA + KM+ +G +P++ +N+L+ H R N+++ + M+
Sbjct: 231 NGLIDTFGKYGQLADARKMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQE 290
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ PD + T+I+ ++D + +++ R G AI ++V ++ + +
Sbjct: 291 EGMYPDPKIFITIINKLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRD 350
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ + +K+E +L ++ NA GL
Sbjct: 351 AQECVAALKAENLQLSPSIFCVLANAYAQQGL 382
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 187/408 (45%), Gaps = 12/408 (2%)
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM--G 194
+ L D + + P A +RL+ + RA + A LL G A +A+ G
Sbjct: 72 LQLLADMQAAGMRPSAAAYARLIRALARAGRALEAEALLLEMRHLGLRPDAAHYNALLEG 131
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK--SRKL 252
+ H+ + L+ + M G+ + Y +++AY + G E + E K +L
Sbjct: 132 LLARAHLRLADRLLLQ-MADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRWGIRL 190
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D+ +ST + ++ DS G +A +M+E G+ D IY LI +F ++
Sbjct: 191 DTAGYST-LVRLYRDS----GMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLAD 245
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A ++F++ +G+ D E L+ + G +++ L + +M+ + I I+N
Sbjct: 246 ARKMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIIN 305
Query: 373 GFSKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
++ G W +K +++++ ++G YA +++ Y + + A++ ++ +
Sbjct: 306 KLGEQ-GKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENLQ 364
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ + Y + G + ++ M+A+G EPN+ + N L++ A + + +
Sbjct: 365 LSPSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAV 424
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
++ ++ ++PD V+YTT++ A+ R + ++ + Y+E G DR
Sbjct: 425 FQHIKDSGMSPDVVTYTTLMKAFMRVKRYEKVSEVYSEMERAGCTPDR 472
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 160/373 (42%), Gaps = 3/373 (0%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
M++AG+ + Y +++ A + G + A L + R L P + H Y L + L
Sbjct: 78 MQAAGMRPSAAAYARLIRALARAG--RALEAEALLLEMRHLGLRPDAAH-YNALLEGLLA 134
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
A + M + G+ + Y L+ ++A ++ + + E + G+ D
Sbjct: 135 RAHLRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRWGIRLDTAG 194
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
LV +Y + G+ +K D++ M+ +++ I +++ F K A K++E++
Sbjct: 195 YSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARKMFEKMR 254
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
QG P T+ ++I +CR+ +A + MQ++G + +++ G+ G+
Sbjct: 255 GQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINKLGEQGKWD 314
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+ L KM+ +G + + IY L+D++G+ + R ++ ++ + + +
Sbjct: 315 ELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENLQLSPSIFCVLA 374
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+AY + + V G + + +++ FS + E + Q +K G
Sbjct: 375 NAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVFQHIKDSGMS 434
Query: 572 LDERLYHSAMNAL 584
D Y + M A
Sbjct: 435 PDVVTYTTLMKAF 447
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/244 (17%), Positives = 105/244 (43%)
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+ ++L ++ M+ A ++ S ++ ++ A + ++ G P Y +
Sbjct: 68 LARSLQLLADMQAAGMRPSAAAYARLIRALARAGRALEAEALLLEMRHLGLRPDAAHYNA 127
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
++ A A+++ ++M G + Y ++ Y + GR+ D+ W++ +MK G
Sbjct: 128 LLEGLLARAHLRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRWG 187
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+ Y++L+ ++ + ++ L EM+ V D Y +I + + +
Sbjct: 188 IRLDTAGYSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADAR 247
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
K + + R G D ++ ++ ++ ++ L M+ EG D +++ + +N L
Sbjct: 248 KMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINKL 307
Query: 585 RDAG 588
+ G
Sbjct: 308 GEQG 311
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 114/540 (21%), Positives = 228/540 (42%), Gaps = 49/540 (9%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSE---------DFKIYNV 148
A D + E + + RP S ++ L+ + + K+D ++SL E D YN+
Sbjct: 64 AVDLFGE---MVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 149 L--------------------------PDAHTCSRLVASCVRARKFKIANTLL-QVFITD 181
L PD T S L+ ++ A L+ Q+F+ +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 182 GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ + FN+ + G + + + ++M + G D Y ++ K GD +
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
+L + + K+++ +Y + D+L +AL F +M KGI + Y SLI
Sbjct: 241 SLLKKMEKGKIEA---DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAK 359
+ A L + E+ + +P V L+ +++EG + + + + M
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKI--NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+ +++NGF A ++E +IS+ C P VTY ++I +C+ +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
++F EM Q+G V Y++++ + G A + KM + G P++ Y+ L+D
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+ L + +++ +++ K+ PD +Y +I +A + + + + G +
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA-LRDAGLQMQAQWLQQ 598
I M+ F + EE L ++MK +GT + Y++ + A LRD A+ +++
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 595
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 184/440 (41%), Gaps = 6/440 (1%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
E++P T LI L K V+L + PD T +V + +A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 172 NTLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
+LL+ + G+I ++ + + + + ++ +M + GI + Y ++
Sbjct: 240 LSLLKK-MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
G + L + RK++ + + L D+ K G+ EA K + +M ++
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVT---FSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
I D Y+SLI F + A+ +F+ K + L+ + + VE+ +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
++ M L + ++ G + A K++++++S G P +TY+ +++
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ KA VF +Q+ + + Y+ M+ K G++ D L + KG +PNV
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
IY +++ R + + L++EM+ P+ +Y T+I A R + + E
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 595
Query: 530 FRMNGGVIDRAIAGIMVGVF 549
R G V D + +++ +
Sbjct: 596 MRSCGFVGDASTISMVINML 615
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 115/278 (41%), Gaps = 19/278 (6%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR------PEKSTLKLLIRYLVQSK 131
PD + S ++G +D +EAK + E P T LI+ ++K
Sbjct: 358 PDIFTYSSLINGFC--------MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFN 190
+ + + L + ++ + T + L+ +A +A + + ++DG ++ ++
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ G K ++V+E ++ + + D Y ++E K G E LF S
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC---SL 526
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
L + +Y + + G EA FR+MKE G L + Y +LI + +
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
+ EL KE G + D + +V+ + +G +EK+
Sbjct: 587 AASAELIKEMRSCGFVGDAST-ISMVINMLHDGRLEKS 623
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 121/544 (22%), Positives = 224/544 (41%), Gaps = 57/544 (10%)
Query: 50 NHRF-FQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAK 108
NH V + +F T ++ +D H P+ F + G K Q A ++ +
Sbjct: 31 NHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMR-ALEFL---R 86
Query: 109 KLPEFR--PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRAR 166
L EF P+ +LI L + D V L E+ + V P+ T + +++ ++
Sbjct: 87 ALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSG 146
Query: 167 KFKIANTLLQVFITDGEIA---LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGC 223
+ A LL+ I G + ++ +N+ + + + EKMK+AGI D
Sbjct: 147 NLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPD--- 203
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
L C IL + K G EAL+
Sbjct: 204 --------------------VLTCN---------------ILVSGICKDGDVEEALEILD 228
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIE 341
MK G + D Y S+I + +V A E+ K M P++ L+ + +
Sbjct: 229 GMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKT-----MSCSPDLVTFNTLLDGFCK 283
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
G++ + L+V+E M + + D I+ I VNG + A + E+++ QG IP +
Sbjct: 284 AGMLPRALEVLEEMCRENI-LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI 342
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
Y S+++ C+ +A K+ EM +G VV YSS+V+ Y + G + A ++A+M
Sbjct: 343 AYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEM 402
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ P ++ YN ++ + ++ + L ++ R PD V+Y T+I +A
Sbjct: 403 VSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRV 462
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+E G + G +V ++ ++++ L+ +M + + +Y S
Sbjct: 463 REACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSL 522
Query: 581 MNAL 584
++ L
Sbjct: 523 IDGL 526
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 127/560 (22%), Positives = 225/560 (40%), Gaps = 41/560 (7%)
Query: 25 KSYRHTLFSTCKAFPFVTVNPSSIINHRFFQVN--ASTNFPTIELNRDSHHQTAVPDAKK 82
K Y+ L S C +P+ + + N A +E R + PD
Sbjct: 48 KVYKDLLHSGC--------SPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYI 99
Query: 83 FDSFLHGMLKDPQTQELAYDYYN-EAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSE 141
F+ +HG+ KD + + N E+ ++ +PE T +I L +S + L E
Sbjct: 100 FNVLIHGLFKDGNPDQAVKLFENMESSRV---KPEIVTYNTVISGLCKSGNLEKARELLE 156
Query: 142 -----------DFKIYNVLPDA-HTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAF 189
D YN L +A + SR+ +C K K A V L
Sbjct: 157 EMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDV---------LTC 207
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
N + G K + + + MK AG V D Y I+ A G + AA L+ S
Sbjct: 208 NILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVE-AAEILKTMS 266
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
D F+T L D K+G AL+ +M + IL D Y L+ + +
Sbjct: 267 CSPDLVTFNT-----LLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQ 321
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
V++A L +E +G + D LV + G +E+ +V+ M + + +
Sbjct: 322 VQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSS 381
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+V+G+ + A ++ +++S +P TY ++ + SKA + ++ +G
Sbjct: 382 LVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARG 441
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ VV Y++++ K R+R+A L +M ++GC PN S++ R +
Sbjct: 442 YVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAW 501
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
L EM R++ P+ V YT++I ++ D + R G +D ++
Sbjct: 502 SLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSM 561
Query: 550 SKLSQIEELVKLLQDMKSEG 569
S ++ E + + +M + G
Sbjct: 562 SHGGRVAEAMAMYDEMVARG 581
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 191/437 (43%), Gaps = 11/437 (2%)
Query: 76 AVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
+ PD +++ ++ + + +E + E K P+ T +L+ + + +
Sbjct: 165 SAPDIVTYNTLINAFYRASRIREACA--FREKMKAAGINPDVLTCNILVSGICKDGDVEE 222
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGG 195
+ + + K+ +PD T + ++ + A K A +L+ + L+ FN+ + G
Sbjct: 223 ALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCSPD--LVTFNTLLDG 280
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K M + V E+M I+ D Y ++ ++G + VA LE R+
Sbjct: 281 FCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQ-VAFYLLEEIVRQ-GYI 338
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P Y L D L KSG EA K ++M +G +Y+SL+ + V A E
Sbjct: 339 P-DVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKARE 397
Query: 316 LFKEAEEKGMLRDPEVCLKLVLM-YIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNG 373
+ E M+ P +VL I++G + K + ++ + A+ + D ++ +++G
Sbjct: 398 ILAEMVSINMV-PPLFTYNIVLGGLIKDGSISKAVSLISDLV-ARGYVPDVVTYNTLIDG 455
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
K A + +++ S+GC P VT S++ CR+ A + +EM +K
Sbjct: 456 LCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPN 515
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VV Y+S++ K+ R+ DA ++ M+ +G + + Y L+ + + ++
Sbjct: 516 VVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYD 575
Query: 494 EMERRKVTPDKVSYTTV 510
EM R PD + T+
Sbjct: 576 EMVARGFLPDGSTSKTL 592
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 156/370 (42%), Gaps = 34/370 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D H Y L D L KSG F K ++D+ G + + LI +
Sbjct: 21 DGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMR 80
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A E + +E + D + L+ ++G ++ + + E+M+++++K +++
Sbjct: 81 ALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVIS 140
Query: 373 GFSKRRGYWAAVKVYEQLISQG--CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
G K A ++ E++I +G P VTY ++INA+ R + +A +M+ G
Sbjct: 141 GLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGI 200
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG-------------------------- 464
+ V+ + +V+ K G + +A+ ++ MK G
Sbjct: 201 NPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAE 260
Query: 465 ------CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
C P++ +N+L+D +A L + ++ +EM R + PD ++YT +++ R
Sbjct: 261 ILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVG 320
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ + E G + D +V K +IEE KL+++M G + +Y
Sbjct: 321 QVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYS 380
Query: 579 SAMNALRDAG 588
S ++ AG
Sbjct: 381 SLVSGYCRAG 390
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 2/211 (0%)
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
KVY+ L+ GC P VT+ +I C+ +A + + + V ++ ++
Sbjct: 48 KVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGL 107
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR--KVTP 502
K G A+ L M++ +P + YN+++ ++ NL + +L +EM R+ K P
Sbjct: 108 FKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAP 167
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D V+Y T+I+A+ RA F + + G D I+V K +EE +++L
Sbjct: 168 DIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEIL 227
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
MK G D Y+S ++AL AG ++A
Sbjct: 228 DGMKLAGPVPDVITYNSIIHALCVAGKVVEA 258
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 165/405 (40%), Gaps = 39/405 (9%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG-DSEKVAAL 243
++ +F + + Y + Y S++ + ++MK + Y ++ + + G D E++ L
Sbjct: 180 SVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGL 239
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
F + + + + + Y L + + G EA FR M E GIL D + Y+ L+ +
Sbjct: 240 FAQMRHEGIQADIVT---YNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVET 296
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
F + ++ EL KE E G D L+ + + G +++ + V M+ A
Sbjct: 297 FGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGA----- 351
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
GC+P TY+ ++N Y R Y +F+
Sbjct: 352 ------------------------------GCVPNAATYSILLNLYGRHGRYDDVRDLFL 381
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM+ + Y+ ++ ++G+ G ++ + L M + EPN+ Y L+ G+
Sbjct: 382 EMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGG 441
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+K+ M + V P +YT VI AY +A ++ + +N G
Sbjct: 442 LHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYN 501
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
++ +F+K +E +L M G + ++ + A R G
Sbjct: 502 SLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGG 546
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 158/341 (46%), Gaps = 4/341 (1%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS--IYASLICSFASITEVKLAE 314
S + + ++ + G +L+ F+ M+ + I P+ IY +I ++ +
Sbjct: 108 LSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQ-IWCKPNEHIYTIMIGVLGREGLLEKCQ 166
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E+F E G+ L+ Y G + +L++++ MK ++ S ++N
Sbjct: 167 EIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSC 226
Query: 375 SKRRGYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
++ W + ++ Q+ +G VTY ++++A R L +AE VF M + G
Sbjct: 227 ARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPD 286
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ YS +V +GK R+ L+ +M++ G P++ YN L++ H ++ ++++ +++
Sbjct: 287 ITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFR 346
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
+M+ P+ +Y+ +++ Y R +D + E +++ + A I++ VF +
Sbjct: 347 QMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGG 406
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+E+V L DM E + + Y + A GL A+
Sbjct: 407 YFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAK 447
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 189/441 (42%), Gaps = 44/441 (9%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTI 206
+LPD T S LV + + + + + LL+ + G + ++N + + + +
Sbjct: 283 ILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAM 342
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
V+ +M+ AG V ++ Y ++ Y + G + V LFLE K + +T + Y IL
Sbjct: 343 GVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMK---VSNTEPNAATYNILI 399
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--CSFASITEVKLAEELFKEAEEKG 324
+ G+ G E + F DM E+ + + Y LI C + E A+++ EKG
Sbjct: 400 NVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHED--AKKILLHMNEKG 457
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
++ + ++ Y + L E+ L +M
Sbjct: 458 VVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEV-------------------------- 491
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
G P TY S+I + + LY ++E + ++M Q G + ++ ++ +
Sbjct: 492 ---------GSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAF 542
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ G+ +A+ +M+ C+P+ +++ ++ A + + E+ + E++ + P
Sbjct: 543 RQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSV 602
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNG-GVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+ Y +++ Y +A +D + +E N I + I ++ G + S + + + +
Sbjct: 603 MCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFE 662
Query: 564 DMKSEGTKLDERLYHSAMNAL 584
+KSEG L R Y++ + AL
Sbjct: 663 KLKSEGCSLGVRFYNTLLEAL 683
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/364 (19%), Positives = 150/364 (41%), Gaps = 23/364 (6%)
Query: 77 VPDAKKFDSFL-----HGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSK 131
VP+A + L HG D + D + E K + P +T +LI +
Sbjct: 354 VPNAATYSILLNLYGRHGRYDDVR------DLFLEMK-VSNTEPNAATYNILINVFGEGG 406
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFN 190
+ +V+L D NV P+ T L+ +C + + A +L G + + A+
Sbjct: 407 YFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYT 466
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ Y + +Y ++ + M G Y +++ + K G ++ A+ L+
Sbjct: 467 GVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQS 526
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ + + + ++ + G+ EA+K + +M++ D +++ + V
Sbjct: 527 GVAR---NRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLV 583
Query: 311 KLAEELFKEAEEKGMLRDPEV---CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+ +EE F E + G+L P V C+ L + Y + + +++ M ++ +
Sbjct: 584 EESEEQFGEIKALGIL--PSVMCYCMMLAV-YAKADRWDDAHQLLDEMFTNRVSNIHQVI 640
Query: 368 CAIVNGFSKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
++ G W V+ V+E+L S+GC G Y +++ A + +A +V E
Sbjct: 641 GQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEAT 700
Query: 427 QKGF 430
++G
Sbjct: 701 KRGL 704
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 179/369 (48%), Gaps = 8/369 (2%)
Query: 236 DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR--DMKEKGILED 293
D + + ++ L +SR S Y L LG G +A++ F +E+ E
Sbjct: 130 DDKGIDSVLLNFESRLCGSDD-----YTFLLRELGNRGEWAKAIRCFEFAVRREQRRNEQ 184
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ +++I + +V+LA+ +F+ A +G L+ Y G ++ + V E
Sbjct: 185 GKLASAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFE 244
Query: 354 SMKNAKLKISDCISCAIVNGFSKRR-GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+MK++ LK + A+++ K + A +++++++ G P ++T+ S++ R
Sbjct: 245 TMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRG 304
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
L+ A +F EM +G ++ + Y++++ K G++ A ++++M K PNV Y
Sbjct: 305 GLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTY 364
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
++++D + +A L + L+ EM+ + D+VSY T++S Y + F+ + E
Sbjct: 365 STVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMES 424
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
+G D ++G + K + EE+ ++ ++MK+E + Y + ++ GL +
Sbjct: 425 SGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQE 484
Query: 593 AQWLQQNFE 601
A + + F+
Sbjct: 485 AMEVFREFK 493
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 164/335 (48%), Gaps = 7/335 (2%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--CSFASITEVKLAEE 315
+ + + L + G+SG EA+K F MK G+ + Y ++I C + + A E
Sbjct: 219 TVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGV-DFNRAAE 277
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F E G+ D L+ + GL E ++ M ++ +++
Sbjct: 278 IFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVC 337
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ--QKGFDKC 433
K A ++ ++ + +P VTY+++I+ Y + +A +F EM+ G D+
Sbjct: 338 KGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDR- 396
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V+Y++++++Y K GR +A+ + +M++ G + + YN+L+ +G+ +V+++++
Sbjct: 397 -VSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFE 455
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
EM+ ++ P+ ++Y+T+I Y++ + ++ + EF+ G D + ++ K
Sbjct: 456 EMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNG 515
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+E V L +M EG + + Y+S ++A +G
Sbjct: 516 LVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG 550
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 138/275 (50%), Gaps = 3/275 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++++M G+ D + ++ + G E LF E R ++ F+ Y L D
Sbjct: 278 IFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFT---YNTLLD 334
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
++ K G+ A + +M K I+ + Y+++I +A + A LF E + +
Sbjct: 335 AVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGL 394
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ +Y + G E+ L+V + M+++ +K A++ G+ K+ Y +V+
Sbjct: 395 DRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVF 454
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
E++ ++ P +TY+++I+ Y + LY +A +VF E ++ G VV YS+++ K
Sbjct: 455 EEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKN 514
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
G + A+ + +M +G PNV YNS++D GR+
Sbjct: 515 GLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRS 549
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 174/419 (41%), Gaps = 49/419 (11%)
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV- 177
T L+ + + + D + + +++P+ T S ++ +A + A L
Sbjct: 328 TYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEM 387
Query: 178 -FITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
F + G + +++N+ + Y KL + + V ++M+S+GI D+ Y ++ Y K G
Sbjct: 388 KFASIG-LDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGK 446
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
E+V +F E K+ ++ + Y L D K G EA++ FR+ K+ G+ D +
Sbjct: 447 YEEVKRVFEEMKAERIFPNLLT---YSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVL 503
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV----- 351
Y++LI + V+ A E ++G+ + ++ + G E +D
Sbjct: 504 YSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVIDPPYETN 563
Query: 352 VESMKNAKLKISDCISCAIV-----NGFSKRRGYWAAVK-------------------VY 387
V M ++ LK+ + + + V N K G AA K V+
Sbjct: 564 VSKMSSSSLKVVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVF 623
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM-YGK 446
++ P VT+++I+NA R + A + E++ FD V + + M YG
Sbjct: 624 HKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELRL--FDNQVYGVAHGLLMGYG- 680
Query: 447 TGRIRDAMWLVAK-----MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
D +W+ A+ +K YN+L DM R + + E +RR V
Sbjct: 681 -----DNVWVQAQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEGKRRHV 734
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 114/540 (21%), Positives = 228/540 (42%), Gaps = 49/540 (9%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSE---------DFKIYNV 148
A D + E + + RP S ++ L+ + + K+D ++SL E D YN+
Sbjct: 48 AVDLFGE---MVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104
Query: 149 L--------------------------PDAHTCSRLVASCVRARKFKIANTLL-QVFITD 181
L PD T S L+ ++ A L+ Q+F+ +
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164
Query: 182 GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ + FN+ + G + + + ++M + G D Y ++ K GD +
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
+L + + K+++ +Y + D+L +AL F +M KGI + Y SLI
Sbjct: 225 SLLKKMEKGKIEA---DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 281
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAK 359
+ A L + E+ + +P V L+ +++EG + + + + M
Sbjct: 282 RCLCNYGRWSDASRLLSDMIERKI--NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 339
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+ +++NGF A ++E +IS+ C P VTY ++I +C+ +
Sbjct: 340 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 399
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
++F EM Q+G V Y++++ + G A + KM + G P++ Y+ L+D
Sbjct: 400 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 459
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+ L + +++ +++ K+ PD +Y +I +A + + + + G +
Sbjct: 460 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 519
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA-LRDAGLQMQAQWLQQ 598
I M+ F + EE L ++MK +GT + Y++ + A LRD A+ +++
Sbjct: 520 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 579
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 184/440 (41%), Gaps = 6/440 (1%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
E++P T LI L K V+L + PD T +V + +A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223
Query: 172 NTLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
+LL+ + G+I ++ + + + + ++ +M + GI + Y ++
Sbjct: 224 LSLLKK-MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 282
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
G + L + RK++ + + L D+ K G+ EA K + +M ++
Sbjct: 283 CLCNYGRWSDASRLLSDMIERKINPNVVT---FSALIDAFVKEGKLVEAEKLYDEMIKRS 339
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
I D Y+SLI F + A+ +F+ K + L+ + + VE+ +
Sbjct: 340 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 399
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
++ M L + ++ G + A K++++++S G P +TY+ +++
Sbjct: 400 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 459
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ KA VF +Q+ + + Y+ M+ K G++ D L + KG +PNV
Sbjct: 460 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 519
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
IY +++ R + + L++EM+ P+ +Y T+I A R + + E
Sbjct: 520 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 579
Query: 530 FRMNGGVIDRAIAGIMVGVF 549
R G V D + +++ +
Sbjct: 580 MRSCGFVGDASTISMVINML 599
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 115/278 (41%), Gaps = 19/278 (6%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR------PEKSTLKLLIRYLVQSK 131
PD + S ++G +D +EAK + E P T LI+ ++K
Sbjct: 342 PDIFTYSSLINGFC--------MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 393
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFN 190
+ + + L + ++ + T + L+ +A +A + + ++DG ++ ++
Sbjct: 394 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 453
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ G K ++V+E ++ + + D Y ++E K G E LF S
Sbjct: 454 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC---SL 510
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
L + +Y + + G EA FR+MKE G L + Y +LI + +
Sbjct: 511 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 570
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
+ EL KE G + D + +V+ + +G +EK+
Sbjct: 571 AASAELIKEMRSCGFVGDAST-ISMVINMLHDGRLEKS 607
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/474 (21%), Positives = 191/474 (40%), Gaps = 11/474 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T I+ L Q + D+ V + PD T + L+ + KF+ A
Sbjct: 249 PNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVY 308
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L + +G E +N+ + GY K M + G V D Y +++
Sbjct: 309 LGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCH 368
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G++ + ALF E + + + +Y L L G EA + +M EKG++ +
Sbjct: 369 EGETNRALALFNEALGKGIKP---NVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPE 425
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ L+ + V A+ L K KG D L+ Y + +E L++++
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M + + +++NG K Y ++ Y+ ++ +GC P T+ ++ + CR
Sbjct: 486 VMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYH 545
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK-AKGCEPNVWIY 472
KA + EM+ K + V + +++ + K G + A L KM+ + Y
Sbjct: 546 KLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTY 605
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N ++ N+ EKL++EM R + PD +Y ++ + + D+ KF E
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMME 665
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
NG + G ++ ++ E ++ M +G L A+N + D
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG------LVPEAVNTIFD 713
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/477 (18%), Positives = 201/477 (42%), Gaps = 8/477 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + ++ LV S +D + + + PD ++ + + S R + A L
Sbjct: 109 PTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRL 168
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L + G E+ ++A+ + +GG+ + + ++ KM ++G+ L + +++ K
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCK 228
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
GD ++ L + R + F+ Y L + G A++ + ++G D
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFT---YNFFIQGLCQKGELDAAVRMVGRLIDQGPKPD 285
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y LI ++ + AE + +G+ D L+ Y + G+V+ ++
Sbjct: 286 VVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILV 345
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+ + ++++G A+ ++ + + +G P + Y ++I
Sbjct: 346 NAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
L +A ++ EM +KG V ++ +V K G + DA LV M +KG P+++ +N
Sbjct: 406 LILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Query: 474 SLMDMHGRAKNLRQVEKL--WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
L +HG + L+ L M V PD +Y ++++ + +++ ++ Y
Sbjct: 466 IL--IHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMV 523
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G + I++ + ++++ + LL++MK++ D + + ++ G
Sbjct: 524 EKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/377 (19%), Positives = 153/377 (40%), Gaps = 7/377 (1%)
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
G Y M+ Y + G ++ +F + T FS Y + L SG +A K
Sbjct: 77 GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFS---YNAIMSILVDSGYFDQAHKV 133
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+ M+++GI D + + SF + A L +G + +V + E
Sbjct: 134 YMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISC--AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
E ++ ++ M + +S C+S +++ K+ K+ +++I +G +P
Sbjct: 194 ENFKDEGYELFGKMLASG--VSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNL 251
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
TY I C+ A ++ + +G VV Y+ ++ K + ++A + K
Sbjct: 252 FTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGK 311
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
+ +G EP+ + YN+L+ + + ++ E++ PD+ +Y ++I E
Sbjct: 312 LVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGE 371
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ + +NE G + + ++ S I E +L +M +G + + ++
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNI 431
Query: 580 AMNALRDAGLQMQAQWL 596
+N L G A L
Sbjct: 432 LVNGLCKMGCVSDADGL 448
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 137/330 (41%), Gaps = 12/330 (3%)
Query: 277 EALKFFRDM-KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK-GMLRDPEVCLK 334
+AL+ F M KE G S Y S+I + + EE+ + + G V +
Sbjct: 22 KALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVG 81
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDC----ISCAIVNGFSKRRGYW-AAVKVYEQ 389
+ Y +G V++ ++V E M DC S + GY+ A KVY +
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMD-----FYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMR 136
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ +G P ++ + ++CR + A ++ M +G + VVAY ++V + +
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ L KM A G + +N L+ + + ++++ EKL ++ +R V P+ +Y
Sbjct: 197 KDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNF 256
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
I + E D V+ G D ++ K S+ +E L + +EG
Sbjct: 257 FIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEG 316
Query: 570 TKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
+ D Y++ + G+ A+ + N
Sbjct: 317 LEPDSFTYNTLIAGYCKGGMVQLAERILVN 346
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 188/439 (42%), Gaps = 51/439 (11%)
Query: 120 LKLLIRYLVQSKKWDSIVSL----SEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL 175
+KLL R K +S+ L S+ FK PD C++L+ +R K A ++
Sbjct: 66 MKLLNRSCRAGKHNESLYFLESVVSKGFK-----PDVVLCTKLIKGFFNSRNLKKAMRVM 120
Query: 176 QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGI------------------ 217
++ T G+ + ++N+ + G++K + S V+++M+S G
Sbjct: 121 EILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRG 180
Query: 218 -----------VLDSGC------YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH 260
+L GC Y ++EA G + LF E SR L ++
Sbjct: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYT-- 238
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
Y + + K G AL F R + +G D Y L+ SF + + + E L K+
Sbjct: 239 -YNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDM 297
Query: 321 EEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
G +P V +L+ + EG V + ++V+E MK L +++ F K
Sbjct: 298 VLSGC--EPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEG 355
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A++ E+++S GC+P V Y +I+ C+ A VF ++ + G V AY+
Sbjct: 356 RLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYN 415
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+M + G A+ ++++M KG +P+ YNSL+ R + + L +ME
Sbjct: 416 TMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEAT 475
Query: 499 KVTPDKVSYTTVISAYNRA 517
+ P +S+ V+ +A
Sbjct: 476 RFQPTVISFNIVLLGMCKA 494
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 148/335 (44%), Gaps = 7/335 (2%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILE---DPSIYA--SLICSFASITEVKLAEELFK 318
+LC L K F + + M+ ILE DP +Y+ ++I F+ ++ A ++F
Sbjct: 98 VLCTKLIKG--FFNSRNLKKAMRVMEILETYGDPDVYSYNAMISGFSKANQIDSANQVFD 155
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
+G D ++ G +E +V++ + K S ++
Sbjct: 156 RMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEG 215
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A++++++L+S+G P TY +II C+ + +A + +G + VV+Y+
Sbjct: 216 RINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYN 275
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
++ + R D L+ M GCEPNV ++ L+ R +R+ + + M+ +
Sbjct: 276 ILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEK 335
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+TPD SY +ISA+ + D+ +++ + +G + D ++ K +
Sbjct: 336 GLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLA 395
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ + + + G R Y++ +AL G +++A
Sbjct: 396 LDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKA 430
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 184/423 (43%), Gaps = 39/423 (9%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTL-LQVFITDGEIALLAFNSAMGGYNKLHMYYSTI 206
VLP TC+ L++ ++ + + A L ++F + ++ FN + K
Sbjct: 182 VLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAK 241
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
M+++G+ + Y I+ Y G E A+ K +K++ F+ Y L
Sbjct: 242 DFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFT---YGSLI 298
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ K GR EA K F +M +KG+ IY +LI F + + +A E +KG
Sbjct: 299 SGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG-- 356
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+ T+ S+ +A F ++R A +
Sbjct: 357 ------------------ISPTMSTYNSLIHAL--------------FMEQRTDEAECMI 384
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
E + +G P +TY +IN YCR A KA + EM G Y+S++ + K
Sbjct: 385 KE-IQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSK 443
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
R+++A L K+ ++G P+ ++N+L+D H N++ +L K+M+R KV PD+V+
Sbjct: 444 KNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVT 503
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+ T++ + R + + + ++E + G D ++ +S+ I++ ++ +M
Sbjct: 504 FNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEML 563
Query: 567 SEG 569
G
Sbjct: 564 DTG 566
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 147/330 (44%), Gaps = 4/330 (1%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S+ ++ L S RA EA + F MKEKG+L SL+ F + + A L+
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E + ++ + +EG ++K D V M+ + +K + IV+G+
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
AA + + Q P TY S+I+ C+ +A K+F EM QKG V Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++++ + G + A +M KG P + YNSL+ + + E + KE++
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ ++PD ++Y +I+ Y R ++E +G + ++ V SK ++++E
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
L + + SEG D ++ NAL D
Sbjct: 450 ADDLFKKITSEGVLPDAIMF----NALIDG 475
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/476 (20%), Positives = 192/476 (40%), Gaps = 43/476 (9%)
Query: 110 LPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFK 169
LP S L L ++ W V +E F++ + +T + ++ + K K
Sbjct: 183 LPTIETCNSLLSLFLKLNRTEAAW---VLYAEMFRL-RIKSSVYTFNIMINVLCKEGKLK 238
Query: 170 IANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
A + T G + ++ +N+ + GY + + MK I DS Y ++
Sbjct: 239 KAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLI 298
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
K G E+ + +F E + L S +Y L D G A + +M +K
Sbjct: 299 SGMCKQGRLEEASKIFEEMVQKGLRP---SAVIYNTLIDGFCNKGNLDMASAYKDEMLKK 355
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI S Y SLI + AE + KE +EKG+ D + Y
Sbjct: 356 GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD-------AITY--------- 399
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
++NG+ + A +++++++ G P + TY S+++
Sbjct: 400 -------------------NILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHV 440
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+ +A+ +F ++ +G + +++++ + ++ A L+ M P+
Sbjct: 441 LSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPD 500
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+N++M H R + + +L+ EM+RR + PD +S+ T+IS Y+R + + N
Sbjct: 501 EVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRN 560
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
E G +V K + + +LL++M S+G D+ Y + + +
Sbjct: 561 EMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 132/315 (41%)
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
G + E +F +++ + ++ LI S + A E F +EKG+L
Sbjct: 127 GTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTI 186
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
E C L+ ++++ E + M ++K S ++N K A
Sbjct: 187 ETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGH 246
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ + G P VTY +I++ YC A+ + M+++ + Y S+++ K GR
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGR 306
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ +A + +M KG P+ IYN+L+D NL EM ++ ++P +Y +
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+I A + D E + G D I++ + + + ++ L +M + G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426
Query: 570 TKLDERLYHSAMNAL 584
K ++ Y S ++ L
Sbjct: 427 IKPTKKTYTSLLHVL 441
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 126/295 (42%), Gaps = 22/295 (7%)
Query: 170 IANTLLQVFITDGEIALLA----------FNSAMGGYNKL-HMYY------STILVYEKM 212
I NTL+ F G + + + + M YN L H + + +++
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387
Query: 213 KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKS 272
+ GI D+ Y ++ Y + +++K L E + + T Y L L K
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPT---KKTYTSLLHVLSKK 444
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
R EA F+ + +G+L D ++ +LI S + VK A EL K+ + + D EV
Sbjct: 445 NRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPD-EVT 503
Query: 333 LKLVLM-YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
++ + EG VE+ ++ + MK +K +++G+S+R A +V +++
Sbjct: 504 FNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEML 563
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
G P +TY +++ C+ AE++ EM KG Y +++ K
Sbjct: 564 DTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/342 (18%), Positives = 131/342 (38%), Gaps = 6/342 (1%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
Q PD+ + S + GM K + +E + + +K RP LI
Sbjct: 285 QKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQK--GLRPSAVIYNTLIDGFCNKGNL 342
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
D + ++ + P T + L+ + ++ A +++ G + +N
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY + L++++M ++GI Y ++ K ++ LF + S +
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
M+ L D + A + +DM + D + +++ +V+
Sbjct: 463 LPDAI---MFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEE 519
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A ELF E + +G+ D L+ Y G ++ V M + + A+V
Sbjct: 520 ARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQ 579
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
G K + A ++ ++++S+G P TY ++I ++ +
Sbjct: 580 GLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNI 621
>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 525
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 205/483 (42%), Gaps = 27/483 (5%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA--N 172
P L +V+ K + + +SL + V PD HT + +V +C+ K + +
Sbjct: 5 PPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLT-IVINCLCHLKHTVFGFS 63
Query: 173 TLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L +F E ++ F + + G + + ++ G +S + I+
Sbjct: 64 VLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLC 123
Query: 233 KIGDSEKVAALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K+GD+ + +E ++R D Y + DSL K G AL FF M KGI
Sbjct: 124 KVGDTAGAISYLEKIEGRNRGFDLLI----AYSTIMDSLCKDGMLCLALNFFSGMTCKGI 179
Query: 291 LEDPSIYASLI---CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
D Y SLI CSF E A L KG++ + + LV + +EG + +
Sbjct: 180 QPDLVAYNSLIHGLCSFGRWNE---ATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISR 236
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
++ M + ++ ++++G AVKV+E +I +G +P VTY+S+I+
Sbjct: 237 AKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIH 296
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+C+ +KA V EM G + VV +S+++ + K GR A+ L M P
Sbjct: 297 GWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLP 356
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA------YNRAREFD 521
N+ ++D + + + L+++ME+ + + V+Y V+ +N ARE
Sbjct: 357 NLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELF 416
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
C+ G ID M+ K +++ LL M+ G +E Y+ +
Sbjct: 417 SCLP------SKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLV 470
Query: 582 NAL 584
L
Sbjct: 471 RGL 473
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/418 (19%), Positives = 160/418 (38%), Gaps = 74/418 (17%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P+ LI L +W+ +L + ++P+ T + LV + + K A T
Sbjct: 180 QPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKT 239
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
++ + G E ++ +NS + G+ L + V+E M G++ + Y ++ +
Sbjct: 240 IMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGW- 298
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
CK+R ++ +A+ +M G+
Sbjct: 299 --------------CKTRNIN-----------------------KAIFVLDEMVNNGLNL 321
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
D +++LI F + A ELF E L + + C
Sbjct: 322 DVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTC-------------------- 361
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
I++G K + + A+ ++ ++ VTY +++ C
Sbjct: 362 ---------------AIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSF 406
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
++ A ++F + KG VVAY++M+ K G + DA L+ KM+ GC PN + Y
Sbjct: 407 GKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTY 466
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
N L+ + ++ + K M+ + ++ D + +IS ++ +E F +F
Sbjct: 467 NVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELLISYFSANKENSALQVFLQKF 524
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 103/224 (45%), Gaps = 7/224 (3%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPG---QVTYASIINAYCRIALYSKAEKVFIEM 425
I+NG K A+ E++ +G G + Y++I+++ C+ + A F M
Sbjct: 117 TIINGLCKVGDTAGAISYLEKI--EGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGM 174
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
KG +VAY+S++ GR +A L+ M KG PNV +N L+D + +
Sbjct: 175 TCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKI 234
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GI 544
+ + + M V PD V+Y +VIS + + + VK + E ++ G++ +
Sbjct: 235 SRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVF-ELMIHKGLLPNVVTYSS 293
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
++ + K I + + +L +M + G LD + + + AG
Sbjct: 294 LIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAG 337
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/378 (19%), Positives = 154/378 (40%), Gaps = 3/378 (0%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+++ M K M + + M GI D Y ++ G + L
Sbjct: 148 LIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLG 207
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ + P + + +L D+ K G+ A M G+ D Y S+I
Sbjct: 208 NMMRKGI--MP-NVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHC 264
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
++++ A ++F+ KG+L + L+ + + + K + V++ M N L +
Sbjct: 265 LLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVV 324
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++ GF K AA++++ + +P T A I++ + +S+A +F +M
Sbjct: 325 TWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKM 384
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
++ + +V Y+ ++ G+ DA L + + +KG + +V Y +++ + L
Sbjct: 385 EKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLL 444
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
E L +ME P++ +Y ++ + + K+ + G D ++
Sbjct: 445 DDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELL 504
Query: 546 VGVFSKLSQIEELVKLLQ 563
+ FS + L LQ
Sbjct: 505 ISYFSANKENSALQVFLQ 522
>gi|255552808|ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543458|gb|EEF44989.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 180/363 (49%), Gaps = 10/363 (2%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + R L ++ Y L S GK+G E+L + + M++ + D +Y++LI
Sbjct: 155 GLFDEMRQRALSPDRYT---YSTLITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLI 211
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A +F + G+ D ++ ++ + L + +V M+ +
Sbjct: 212 ELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVFGKARLFREARMLVHEMREVGV- 270
Query: 362 ISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ D +S +++ + + + A+ V+ ++ C +T +I+ Y ++ + +A++
Sbjct: 271 LPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADR 330
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+F M++ G + VV+Y++++ +YG+ +A+ L M+ K E NV YN+++ ++G
Sbjct: 331 LFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 390
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
++ + L +EM++R + P+ ++Y+T+IS + +A + D + + R +G ID+
Sbjct: 391 KSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQV 450
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL-QQN 599
+ M+ + + + +LL D+K D +A+ L AG +A W+ +Q
Sbjct: 451 LYQTMIVAYERAGLVAHAKRLLHDLKCP----DIIPRDTAIKILARAGRIEEATWVFRQA 506
Query: 600 FEG 602
F+
Sbjct: 507 FDA 509
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 177/416 (42%), Gaps = 75/416 (18%)
Query: 102 DYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS 161
D+ NE + + P +++R ++++KKWD L ++ + + PD +T S L+ S
Sbjct: 122 DWINEVAR---YSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITS 178
Query: 162 CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
+ K M+ ++ ++M+ + D
Sbjct: 179 ----------------------------------FGKAGMFDESLFWLQQMEQDRVSGDL 204
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y ++E K+ D K ++F+ K + TP Y + + GK+ EA
Sbjct: 205 VLYSNLIELSRKLCDYSKAISIFMRLKRSGI--TP-DLVAYNSMINVFGKARLFREARML 261
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+M+E G+L D Y++L+ + + A +F E E D C ++ +Y
Sbjct: 262 VHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVY-- 319
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
LD+V+ R +W+ K+ G P V+
Sbjct: 320 -----GQLDMVKEAD---------------------RLFWSMRKM-------GIEPNVVS 346
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y +++ Y L+ +A +F MQ+K ++ VV Y++M+ +YGK+ A LV +M+
Sbjct: 347 YNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQ 406
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+G EPN Y++++ + G+A L + L++++ V D+V Y T+I AY RA
Sbjct: 407 KRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERA 462
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 146/325 (44%), Gaps = 35/325 (10%)
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
LA LF E ++ + D L+ + + G+ +++L ++ M+ ++ + ++
Sbjct: 152 LAHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLI 211
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
K Y A+ ++ +L G P V Y S+IN + + L+ +A + EM++ G
Sbjct: 212 ELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVFGKARLFREARMLVHEMREVGVL 271
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
V+YS+++++Y + + +A+ + A+M C ++ N ++D++G+ +++ ++L
Sbjct: 272 PDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRL 331
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN-----EFRMN------------- 533
+ M + + P+ VSY T++ Y A F + + E N
Sbjct: 332 FWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 391
Query: 534 ----------------GGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
G+ AI ++ ++ K +++ L Q ++S G ++D+ L
Sbjct: 392 SLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVL 451
Query: 577 YHSAMNALRDAGLQMQAQWLQQNFE 601
Y + + A AGL A+ L + +
Sbjct: 452 YQTMIVAYERAGLVAHAKRLLHDLK 476
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 84/177 (47%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P Y ++ R + A +F EM+Q+ YS+++ +GK G ++++
Sbjct: 132 PSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFW 191
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ +M+ ++ +Y++L+++ + + + ++ ++R +TPD V+Y ++I+ + +
Sbjct: 192 LQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVFGK 251
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
AR F +E R G + D ++ V+ + + E + + +M LD
Sbjct: 252 ARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLD 308
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 64/130 (49%)
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+V+ YN ++ RAK L+ EM +R ++PD+ +Y+T+I+++ +A FD + +
Sbjct: 132 PSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFW 191
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ + D + ++ + KL + + + +K G D Y+S +N
Sbjct: 192 LQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVFGK 251
Query: 587 AGLQMQAQWL 596
A L +A+ L
Sbjct: 252 ARLFREARML 261
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 114/538 (21%), Positives = 224/538 (41%), Gaps = 45/538 (8%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A D + E K F P L+ + + KK+D ++S E +I V + +T + ++
Sbjct: 49 AVDLFGEMVKSRPF-PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY---NKL-----------HMYYS 204
R + A +L + G +++ NS + G+ N++ M Y
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 205 ------TILVY---------------EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
T LV+ E+M G D Y ++ K G+ + L
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
+ + K+++ +Y + DSL K +AL F +M KGI D Y+SLI
Sbjct: 228 LNKMEKGKIEA---DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ A L + E+ + +P V L+ + +EG + + + + M +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKI--NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ +++NGF A +++ ++S+ C+P VTY ++IN +C+ ++
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F +M ++G V Y++++ + + +A + +M + G PN+ YN+L+D +
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
L + +++ +++ K+ PD +Y + +A + + + + G D
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA-LRDAGLQMQAQWLQQ 598
M+ F K EE L MK +G D Y++ + A LRD A+ +++
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 580
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 11/190 (5%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLK--DPQTQELAYDYYNEAKKLPE--FRPEKSTL 120
+EL RD + V + + + +HG + D ++ + K++ P T
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF------KQMVSDGVHPNIMTY 453
Query: 121 KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
L+ L ++ K + + + E + + PD +T + + +A K + L
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 181 DG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
G + ++A+N+ + G+ K + ++ KMK G + DSG Y ++ A+ + GD
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573
Query: 240 VAALFLECKS 249
A L E +S
Sbjct: 574 SAELIKEMRS 583
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/506 (20%), Positives = 211/506 (41%), Gaps = 42/506 (8%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR-YLVQSKKWDSIV 137
D + + + LH + ++ + E A ++E ++ P + T +++ Y + W +V
Sbjct: 182 DVRAYTTVLHALSREGR-YERALRLFDELRR-EGVAPTRVTYNVVLDVYGRMGRSWPRVV 239
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+L D + V PD T S ++A+ R A + G ++ +N+ + +
Sbjct: 240 ALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVF 299
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K Y + V +M+ AG D+ Y ++ +Y + G ++ A + L
Sbjct: 300 GKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNT 359
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
F+ Y + + G +G+ EAL F MK+ G + + Y ++ + E+
Sbjct: 360 FT---YNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEM 416
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E G + L+ + + G+ V+E MK+ K+++
Sbjct: 417 LGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELC------------- 463
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ TY ++I AY R + A K++ EM GF C+
Sbjct: 464 ----------------------RDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTT 501
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++++ + + G A +V+KMK++G +PN Y+ L+ H + N +E + KE+
Sbjct: 502 YNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVY 561
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ + P V T++ A + R + + + E + G D I M+ +++K
Sbjct: 562 QGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYS 621
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMN 582
+ +++ + ++ G D Y+S M+
Sbjct: 622 KAMEMFESIEQLGLSPDLITYNSLMD 647
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 163/373 (43%), Gaps = 6/373 (1%)
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
L+ E G LD Y ++ A + G E+ LF E + + T + Y ++
Sbjct: 169 LLDEMPLPPGARLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVT---YNVVL 225
Query: 267 DSLGKSGRAF-EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
D G+ GR++ + DM+ G+ D +++I + V A F++ + +G
Sbjct: 226 DVYGRMGRSWPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGH 285
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-AV 384
L+ ++ + G + L V+ M++A K D ++ + G R G++ A
Sbjct: 286 APCVVTYNALLQVFGKAGNYTEALRVLREMEDAGCK-PDAVTYNELAGSYARAGFYQEAA 344
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
K + +I +G +P TY +I+ AY +A +F M++ GF Y+ ++ M
Sbjct: 345 KCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGML 404
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
GK R + ++ +M GC PN +N+L+ + G+ V ++ + M+ KV +
Sbjct: 405 GKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCR 464
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+Y T+I AY R K Y+E G ++ V S+ ++
Sbjct: 465 DTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSK 524
Query: 565 MKSEGTKLDERLY 577
MKSEG K ++ Y
Sbjct: 525 MKSEGFKPNDMSY 537
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 146/336 (43%), Gaps = 6/336 (1%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMK-EKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
++++ +LG+ GR +M G D Y +++ + + + A LF E
Sbjct: 150 FEMVVRALGREGRHDAVCALLDEMPLPPGARLDVRAYTTVLHALSREGRYERALRLFDEL 209
Query: 321 EEKGMLRDPEVCLKLVL-MYIEEGLV-EKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
+G+ V +VL +Y G + + ++ M+ A ++ D + + V + R
Sbjct: 210 RREGVA-PTRVTYNVVLDVYGRMGRSWPRVVALLADMRAAGVE-PDGFTASTVIAAAGRD 267
Query: 379 GYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
G AV +E L ++G P VTY +++ + + Y++A +V EM+ G V Y
Sbjct: 268 GLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTY 327
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+ + Y + G ++A + M KG PN + YN++M +G A + + L+ M++
Sbjct: 328 NELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKK 387
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
P +Y V+ + F ++ E +G +R ++ V K
Sbjct: 388 NGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESY 447
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ ++L+ MKS +L Y++ + A G + A
Sbjct: 448 VTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANA 483
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 179/429 (41%), Gaps = 30/429 (6%)
Query: 80 AKKFDSFL-HGMLKDPQTQELAYDYYNEAKKLPE------------FRPEKSTLKLLIRY 126
AK D+ + G+L + T Y A K+ E F P +T L++
Sbjct: 344 AKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGM 403
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCV-RARKFKIANTLLQVFITDGEIA 185
L + ++ +++ + + P+ T + L+A C R + + L + E+
Sbjct: 404 LGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELC 463
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+N+ + Y + + +Y++M +AG Y ++ + GD ++
Sbjct: 464 RDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVS 523
Query: 246 ECKSRKLDSTPFSTHMYKIL--CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
+ KS S Y +L C + G + EA++ +++ + I I +L+ +
Sbjct: 524 KMKSEGFKPNDMS---YSLLLQCHAKGGNAAGIEAIE--KEVYQGNIFPSWVILRTLVIA 578
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
++ E F+E + +G D + ++ +Y + GL K +++ ES++ L
Sbjct: 579 NFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPD 638
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQL---------ISQGCIPGQVTYASIINAYCRIAL 414
++++ ++K W A K+ +L Q P V+Y ++IN +C+ L
Sbjct: 639 LITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGL 698
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+A++V EM G CV+ Y ++V Y +A +V M + +P Y
Sbjct: 699 IKEAQRVLSEMIADGVAPCVITYHTLVGGYASREMFAEAREVVGYMIQRKLKPMELTYRR 758
Query: 475 LMDMHGRAK 483
++D + RAK
Sbjct: 759 VVDSYCRAK 767
>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
Length = 667
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 165/385 (42%), Gaps = 14/385 (3%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----CKSRKLDSTPFSTHMYKI 264
E+++S G+ L Y ++ Y + G + V F E C+ +D F + K
Sbjct: 150 ERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLVKN 209
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
C L + K++ +KG Y+ I + ++L E L + ++ G
Sbjct: 210 CCFDLVE--------KYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFG 261
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
D C V + + L +E+M +V + + AV
Sbjct: 262 CFPDIWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAV 321
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+++E+++ +G P V +I C+ +A ++ + M + V Y+++++ +
Sbjct: 322 ELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGF 381
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK-VTPD 503
++G I A +++ M+ GCEP+V YN ++ + +++ EKL +EME V PD
Sbjct: 382 LRSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPD 441
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+ SY ++ +A + D F ++ GG D I++ F K ++ +KL +
Sbjct: 442 RYSYNQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFK 501
Query: 564 DMKSEGTKLDERLYHSAMNALRDAG 588
+M +G + D Y + +N L G
Sbjct: 502 EMGYKGIQADAVTYGTLINGLYGVG 526
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 197/485 (40%), Gaps = 19/485 (3%)
Query: 90 MLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVL 149
+L+ E+A +Y A+ P F + + ++ L + + E + V
Sbjct: 99 VLRSISDSEMAVRFYWWAESRPGFDHTQFAIAYVVSLLFVDSNFFLLSEFLERVRSQGVA 158
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG--EIALLAFNSAMG------GYNKLHM 201
L++ VRA KF +T G E + +N +G ++ +
Sbjct: 159 LHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGV-DYNRFIGVLVKNCCFDLVEK 217
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
YYS L G L S Y + + A + E V L + ++ ++
Sbjct: 218 YYSVAL------DKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIWACNI 271
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y D L K R +ALK +M +G D Y +++ + A EL++E
Sbjct: 272 Y---VDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMV 328
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+G+ D C L+ + V++ ++ M + L+++ CI A+++GF +
Sbjct: 329 RRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSIN 388
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF-DKCVVAYSSM 440
A K+ + + GC P VTY +N YC + +AEK+ EM+ G + +Y+ M
Sbjct: 389 KAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQM 448
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ K ++ A V+ G ++ N L+D +AK + KL+KEM + +
Sbjct: 449 LKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGI 508
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
D V+Y T+I+ + + + + + V + + IM+ K Q E+ K
Sbjct: 509 QADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQK 568
Query: 561 LLQDM 565
+ M
Sbjct: 569 IFLQM 573
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 187/433 (43%), Gaps = 15/433 (3%)
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDG 182
I L QS++ + + L D + PD C+ V C R TL ++I
Sbjct: 238 ISALCQSERIELVERLLADMDKFGCFPDIWACNIYVDCLCKHNRLHDALKTLENMWIRGT 297
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
++ + + +G + + ++E+M G+ D C ++ + + S+KV
Sbjct: 298 NPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDI-VACGVL--IFGLCKSDKVDE 354
Query: 243 LFLECKSRKLD-STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
F E R L + + +Y L +SG +A K M+ G D Y +
Sbjct: 355 AF-ELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDVVTYNIRL 413
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE-KTLDVVESMKNAKL 360
+ + +K AE+L +E E G++ +L +GL + LD + +
Sbjct: 414 NHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQML----KGLCKAHQLDRAFGFVSDHM 469
Query: 361 KIS---DCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
++ D +SC I ++ F K + +A+K+++++ +G VTY ++IN + Y
Sbjct: 470 EVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYY 529
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
AE++F +M + V Y+ M+ K G+ A + +M K P++ +N+L+
Sbjct: 530 LAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLI 589
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
G+ + L+++M R + PD +++ +IS + + + NG +
Sbjct: 590 YWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYMLENGII 649
Query: 537 IDRAIAGIMVGVF 549
+DR ++ ++ +F
Sbjct: 650 LDRDVSDRLISMF 662
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 126/285 (44%), Gaps = 3/285 (1%)
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLV--LMYIEEGLVEKTLDVVESMKNAKLKIS 363
SI++ ++A + AE + + + V L++++ + + +E +++ + +
Sbjct: 102 SISDSEMAVRFYWWAESRPGFDHTQFAIAYVVSLLFVDSNFFLLS-EFLERVRSQGVALH 160
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+ +++G+ + + + + ++++++ GC V Y I + + EK +
Sbjct: 161 RSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLVKNCCFDLVEKYYS 220
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
KGF YS ++ ++ RI L+A M GC P++W N +D +
Sbjct: 221 VALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIWACNIYVDCLCKHN 280
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
L K + M R PD V+YTTV+ ++F V+ + E G D G
Sbjct: 281 RLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACG 340
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+++ K +++E +L M S +L+ +Y++ ++ +G
Sbjct: 341 VLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSG 385
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 166/382 (43%), Gaps = 5/382 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY +M S G+ Y +M A K DSE V L E + L ++ + I
Sbjct: 214 VYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYT---FTICIR 270
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
LG++G+ EA + FR M ++G D Y LI + + +++ A+ELF + + G
Sbjct: 271 VLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKP 330
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKV 386
D + + L+ + + G ++ T S A + D ++ I V+ K R + A
Sbjct: 331 DQVIYITLLDKFNDFGDLD-TFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFAT 389
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
++ + QG +P TY ++I R A K+ M+ G Y+ + +GK
Sbjct: 390 FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGK 449
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
+G A+ KMKAKG PN+ N+ + LR+ + ++ + + PD V+
Sbjct: 450 SGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVT 509
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y ++ Y++ + D V +E NG D + ++ K +++E ++ MK
Sbjct: 510 YNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMK 569
Query: 567 SEGTKLDERLYHSAMNALRDAG 588
Y++ ++ L G
Sbjct: 570 DMKLSPTVVTYNTLLSGLGKEG 591
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/462 (20%), Positives = 196/462 (42%), Gaps = 47/462 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQE---LAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
PD + L G++K Q + +A D+ + + FR +S + L+ + + D
Sbjct: 679 PDHVTICTLLPGLVKCGQIGDAISIARDFMYQVR----FRVNRSFWEDLMGGTLVEAEMD 734
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSA 192
+ +E+ + + + LV + ++ A + F I+ L ++N
Sbjct: 735 KAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCL 794
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+G ++H +++ MK+ G D+ + ++ + K G ++ L+ E SR+
Sbjct: 795 IGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRC 854
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
+ Y I+ SL KS +AL FF D+ P Y LI A + ++
Sbjct: 855 KPDAIT---YNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEE 911
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A LF+E + G K + I ++N
Sbjct: 912 AMRLFEEMSDYG-----------------------------------CKPNCAIFNILIN 936
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G+ K A +++++++++G P +Y +++ C +A F E++ G D
Sbjct: 937 GYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDP 996
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+AY+ ++ GK+ R+ +A+ L +M+ +G P+++ YNSLM G A + Q ++++
Sbjct: 997 DFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMY 1056
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+E++ + PD +Y +I Y+ + + Y ++G
Sbjct: 1057 EELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDG 1098
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 190/459 (41%), Gaps = 17/459 (3%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
RP T + IR L ++ K D + PD T + L+ + A + + A
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAK 317
Query: 173 TLLQVFITDGE-------IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
L +G I LL + G + ++S +M++ G + D +
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWS------QMEADGYMPDVVTFT 371
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+++ K D ++ A F RK P + H Y L L ++GR +ALK M
Sbjct: 372 ILVDVLCKARDFDEAFATF--DVMRKQGILP-NLHTYNTLICGLLRAGRIEDALKLLGTM 428
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+ G+ Y I F E A E F++ + KG++ + C + E G +
Sbjct: 429 ESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRL 488
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+ + ++ L ++ +SK AV + ++I GC P + S+
Sbjct: 489 REAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSL 548
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
I++ + +A ++F M+ VV Y+++++ GK GR++ A+ L M K C
Sbjct: 549 IDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKC 608
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
PN +N+L+D + + K++ +M PD ++Y TVI + + +
Sbjct: 609 SPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFW 668
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
F+++ + + I ++ G+ K QI + + + +D
Sbjct: 669 FFHQLKKSMHPDHVTICTLLPGLV-KCGQIGDAISIARD 706
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 2/263 (0%)
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV-KVYEQLISQGCIPG 398
+E EK D+ + MKN D + ++ + G + ++Y+++IS+ C P
Sbjct: 799 LEVHYTEKAWDLFKDMKNVGCA-PDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPD 857
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+TY +I++ + KA F ++ F Y ++ K GR+ +AM L
Sbjct: 858 AITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFE 917
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+M GC+PN I+N L++ +G+ + +L+K M + PD SYT ++ A
Sbjct: 918 EMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAG 977
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
D + ++NE + G D ++ K ++EE + L +M++ G D Y+
Sbjct: 978 RVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYN 1037
Query: 579 SAMNALRDAGLQMQAQWLQQNFE 601
S M L AG+ QA+ + + +
Sbjct: 1038 SLMLNLGLAGMVEQAKRMYEELQ 1060
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 163/399 (40%), Gaps = 48/399 (12%)
Query: 84 DSFLHGMLKD--PQTQEL-AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ----SKKWDSI 136
DSFL +++ +EL AY +++ K P ++ LI L++ K WD
Sbjct: 752 DSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWD-- 809
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
L +D K PDA T N LL V G+I L
Sbjct: 810 --LFKDMKNVGCAPDAFT----------------FNMLLAVHGKSGKITEL--------- 842
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+Y++M S D+ Y ++ + K + +K F + S TP
Sbjct: 843 ---------FELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y L D L K GR EA++ F +M + G + +I+ LI + I + + A +L
Sbjct: 894 ---RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
FK +G+ D + LV G V++ L +K+ L I+NG K
Sbjct: 951 FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A+ +Y ++ ++G +P TY S++ + +A++++ E+Q G + V
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
Y++++ Y + A + M GC PN+ Y L
Sbjct: 1071 YNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/457 (19%), Positives = 192/457 (42%), Gaps = 38/457 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ ++G++K+ + A+ ++++ KK P+ T+ L+ LV+ + +
Sbjct: 645 PDVLTYNTVIYGLIKENKVNH-AFWFFHQLKK--SMHPDHVTICTLLPGLVKCGQIGDAI 701
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
S++ DF +Y V +F++ + + MGG
Sbjct: 702 SIARDF-MYQV------------------RFRVNRSF--------------WEDLMGGTL 728
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
I+ E++ GI + ++ K E A + ++KL +P
Sbjct: 729 VEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCK-HKRELYAYQIFDKFTKKLGISP- 786
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ Y L L + +A F+DMK G D + L+ ++ EL+
Sbjct: 787 TLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELY 846
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
KE + D ++ + ++K LD + ++ + + +++G +K
Sbjct: 847 KEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKV 906
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A++++E++ GC P + +IN Y +I A ++F M +G + +Y
Sbjct: 907 GRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSY 966
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+ +V GR+ +A++ ++K+ G +P+ YN +++ G+++ + + L+ EM
Sbjct: 967 TILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRN 1026
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
R + PD +Y +++ A + + Y E ++ G
Sbjct: 1027 RGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAG 1063
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 137/322 (42%), Gaps = 5/322 (1%)
Query: 87 LHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIY 146
L G L + E A+D + + K + P+ T +L+ +S K + L ++
Sbjct: 794 LIGELLEVHYTEKAWDLFKDMKNVG-CAPDAFTFNMLLAVHGKSGKITELFELYKEMISR 852
Query: 147 NVLPDAHTCSRLVASCVRARKF-KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYST 205
PDA T + +++S ++ K + + +D + + G K+
Sbjct: 853 RCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEA 912
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ ++E+M G + + ++ Y KIGD+E LF + + S Y IL
Sbjct: 913 MRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKS---YTIL 969
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
D L +GR EAL +F ++K G+ D Y +I ++ A L+ E +G+
Sbjct: 970 VDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1029
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ D L+L G+VE+ + E ++ A L+ A++ G+S A
Sbjct: 1030 VPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYT 1089
Query: 386 VYEQLISQGCIPGQVTYASIIN 407
VY+ ++ GC P TYA + N
Sbjct: 1090 VYKNMMVDGCNPNIGTYAQLPN 1111
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 142/364 (39%), Gaps = 73/364 (20%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+E M+ I D Y I +A G ++ + K RK + + Y L
Sbjct: 144 VFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVL--NKMRKAGFV-LNAYSYNGLIH 200
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L +SG EAL+ +R M +G+ Y++L+ + + ++ L KE E+ G+
Sbjct: 201 LLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGL-- 258
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
P V T + + KI + A +++
Sbjct: 259 RPNV---------------YTFTICIRVLGRAGKIDE------------------AYEIF 285
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
++ +GC P VTY +I+A C A+++F+
Sbjct: 286 RRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFV------------------------ 321
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
KMKA G +P+ IY +L+D +L ++ W +ME PD V++
Sbjct: 322 -----------KMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTF 370
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T ++ +AR+FD ++ R G + + ++ + +IE+ +KLL M+S
Sbjct: 371 TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMES 430
Query: 568 EGTK 571
G +
Sbjct: 431 VGVQ 434
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 87/485 (17%), Positives = 202/485 (41%), Gaps = 23/485 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T ++++ + + D V+L + PD + L+ S +A + A
Sbjct: 505 PDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA--- 561
Query: 175 LQVF--ITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
Q+F + D +++ ++ +N+ + G K I ++E M ++ + +++
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDC 621
Query: 231 YYKIGDSEKVAALF-----LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+ K + E +F ++CK D ++T +Y ++ K + A FF +
Sbjct: 622 FCKNDEVELALKMFSKMTVMDCKP---DVLTYNTVIYGLI-----KENKVNHAFWFFHQL 673
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR-DPEVCLKLVLMYIEEGL 344
K K + D +L+ ++ A + ++ + R + L+ + E
Sbjct: 674 K-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAE 732
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ-GCIPGQVTYA 403
++K + E + + D +V K + A +++++ + G P +Y
Sbjct: 733 MDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYN 792
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
+I + KA +F +M+ G ++ ++A++GK+G+I + L +M ++
Sbjct: 793 CLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISR 852
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
C+P+ YN ++ ++ NL + + ++ P +Y +I + +
Sbjct: 853 RCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEA 912
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++ + E G + AI I++ + K+ E +L + M +EG + D + Y ++
Sbjct: 913 MRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDC 972
Query: 584 LRDAG 588
L AG
Sbjct: 973 LCLAG 977
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/480 (21%), Positives = 199/480 (41%), Gaps = 42/480 (8%)
Query: 135 SIVSLSEDFKIYNVLPDAHTCSR--LVASCVRARKFKIA----------------NTLLQ 176
S + L E ++ LPD + CS L+ + + A + K A T++
Sbjct: 236 SRLPLDEAIALFRELPDKNVCSHNILLKALLSAGRLKDACQHFDEMSSPPDVVTYGTMVH 295
Query: 177 VFITDGE----IALLAFNSAMGGYNKLHMYYSTIL-------------VYEKMKSAGIVL 219
+ GE + LL +A G + +Y S I V E M G+ L
Sbjct: 296 GYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVAL 355
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
D+ + ++ + GD LF E + R L + + + L + L ++G EA
Sbjct: 356 DAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVT---HTALINGLCRAGELKEAD 412
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM- 338
+ ++M +KG+ D Y LI + + E E G P V L
Sbjct: 413 RVLQEMVDKGLDVDVVTYTVLIDGYCK--RGNMVEAFRVHNEMVGRRVAPNVVTYTALSD 470
Query: 339 -YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
++G V +++ M N L+++ +++NG K A+++ ++ + G
Sbjct: 471 GLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRT 530
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
TY ++I+ C+ + +A + EM KG + Y+ ++ + +GR+ L+
Sbjct: 531 DVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLL 590
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
M K PNV YNSLM + KN++ +++K M ++V P++ +Y +I + +A
Sbjct: 591 EWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKA 650
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
R + F+ E G + + ++ + +K + E M++EG + +Y
Sbjct: 651 RNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVY 710
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 161/363 (44%), Gaps = 14/363 (3%)
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
++ ALF E + + S + IL +L +GR +A + F +M D Y
Sbjct: 241 DEAIALFRELPDKNVCS-------HNILLKALLSAGRLKDACQHFDEMSSP---PDVVTY 290
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
+++ + E++ A +L E KG+ + V ++ + +G V L V+E M
Sbjct: 291 GTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTM 350
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ + + +++GF + AA +++E++ +G +VT+ ++IN CR +
Sbjct: 351 HGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKE 410
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A++V EM KG D VV Y+ ++ Y K G + +A + +M + PNV Y +L D
Sbjct: 411 ADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSD 470
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+ ++R +L EM + + + +Y ++I+ + + ++ E G
Sbjct: 471 GLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRT 530
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL----RDAGLQMQA 593
D ++ K + + +LQ+M +G K Y+ MN R G +
Sbjct: 531 DVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLL 590
Query: 594 QWL 596
+W+
Sbjct: 591 EWM 593
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 5/169 (2%)
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
DK V +++ ++ GR++DA +M + P+V Y +++ + L K
Sbjct: 252 DKNVCSHNILLKALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVK 308
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L EM + + + YT+VI+ + ++ + M+G +D + ++ F
Sbjct: 309 LLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFC 368
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAM-NALRDAGLQMQAQWLQQ 598
+ +L ++M+ G D R+ H+A+ N L AG +A + Q
Sbjct: 369 SKGDLAAARRLFEEMQKRGLAAD-RVTHTALINGLCRAGELKEADRVLQ 416
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 173/382 (45%), Gaps = 16/382 (4%)
Query: 203 YSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFSTH 260
Y+ + + M G ++ YC ++ Y G+ + LF E +R L D F+
Sbjct: 163 YAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNK- 221
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP---SIYASLICSFASI------TEVK 311
+ +LC K G FE+ + + ++G+ + +I+ +C ++ + V
Sbjct: 222 LVHVLC----KKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVV 277
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
AEE ++ G D ++ Y ++G+V+ V++ K + C+++
Sbjct: 278 EAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLI 337
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
NGF K A+ V++ + +G P V Y ++I + L A ++ EM + G
Sbjct: 338 NGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCL 397
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ Y+ ++ K G + DA LV AKGC P+++ YN+L+D + + L ++
Sbjct: 398 PNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEM 457
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
M + +TPD ++Y T+++ +A + + ++ + G + I+V K
Sbjct: 458 VNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCK 517
Query: 552 LSQIEELVKLLQDMKSEGTKLD 573
++ E V LL +MKS+G K D
Sbjct: 518 AKKVNEAVDLLGEMKSKGLKPD 539
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 150/344 (43%), Gaps = 6/344 (1%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y + D K G +A + +D KG D Y SLI F + A +FK+
Sbjct: 298 YNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGL 357
Query: 322 EKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
KG+ P + L L+ ++GL+ L ++ M + ++NG K
Sbjct: 358 GKGL--RPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGC 415
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A + + I++GC P TY ++I+ YC+ A ++ M +G V+ Y++
Sbjct: 416 VSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNT 475
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ K G+ + M + M+ KGC PN+ YN ++D +AK + + L EM+ +
Sbjct: 476 LLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKG 535
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR-AIAGIMVGVFSKLSQIEEL 558
+ PD VS+ T+ + + + + D + + V A I+V FS+ +
Sbjct: 536 LKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMA 595
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA-QWLQQNFE 601
+KL MK+ G D Y ++ G Q ++L +N E
Sbjct: 596 MKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENME 639
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 142/302 (47%)
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
D ++ R EA ++ R M G D Y S+I + V+ A + K+A KG
Sbjct: 268 DRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFK 327
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D L+ + ++G ++ + V + L+ S + ++ G S++ A+++
Sbjct: 328 PDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQL 387
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
++ GC+P TY +IN C++ S A + + KG + Y++++ Y K
Sbjct: 388 MNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCK 447
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
++ A +V +M ++G P+V YN+L++ +A +V +++K ME + TP+ ++
Sbjct: 448 QLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIIT 507
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y ++ + +A++ + V E + G D G + F K+ I+ +L + M+
Sbjct: 508 YNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRME 567
Query: 567 SE 568
+
Sbjct: 568 KQ 569
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 177/441 (40%), Gaps = 47/441 (10%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
A+ AM Y + + +E+M + IM + G + +++
Sbjct: 78 AYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRM 137
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+ R + S ++ Y I S K+ R + AL+ R+M E G + Y +++
Sbjct: 138 RDRGVQSDVYT---YTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDS 194
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV---------------------- 345
E A ELF E + + D KLV + ++GLV
Sbjct: 195 GEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTF 254
Query: 346 ---------EKTLD-------VVES------MKNAKLKISDCISCAIVNGFSKRRGYWAA 383
E LD VVE+ M N + D +I++G+ K+ A
Sbjct: 255 NIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDA 314
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+V + + +G P + TY S+IN +C+ +A VF + KG +V Y++++
Sbjct: 315 NRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKG 374
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+ G I A+ L+ +M GC PN+W YN +++ + + L + + PD
Sbjct: 375 LSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPD 434
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+Y T+I Y + + D + N G D ++ K + EE++++ +
Sbjct: 435 IFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFK 494
Query: 564 DMKSEGTKLDERLYHSAMNAL 584
M+ +G + Y+ +++L
Sbjct: 495 AMEEKGCTPNIITYNIIVDSL 515
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 151/370 (40%), Gaps = 7/370 (1%)
Query: 163 VRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
VR + A L+ + G E L +NS + GY K M V + G D
Sbjct: 271 VRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDE 330
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
YC ++ + K GD ++ A+F + + L S +Y L L + G AL+
Sbjct: 331 FTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRP---SIVLYNTLIKGLSQQGLILPALQL 387
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+M E G L + Y +I + V A L +A KG D L+ Y +
Sbjct: 388 MNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCK 447
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
+ ++ ++V M + + ++NG K +++++ + +GC P +T
Sbjct: 448 QLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIIT 507
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y I+++ C+ ++A + EM+ KG VV++ ++ + K G I A L +M+
Sbjct: 508 YNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRME 567
Query: 462 AK--GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
+ C YN ++ N+ KL+ M+ PD +Y VI + +
Sbjct: 568 KQYDVCH-TTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGN 626
Query: 520 FDMCVKFYNE 529
KF E
Sbjct: 627 ITQGYKFLLE 636
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 155/391 (39%), Gaps = 40/391 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + S ++G KD + + K RP LI+ L Q +
Sbjct: 328 PDEFTYCSLINGFCKDGDPDRAMAVFKDGLGK--GLRPSIVLYNTLIKGLSQQGLILPAL 385
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L + LP+ T + ++ + A+ L+ I G + +N+ + GY
Sbjct: 386 QLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGY 445
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K S + +M S G+ D Y ++ K G SE+V +F + + TP
Sbjct: 446 CKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEK--GCTP 503
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y I+ DSL K+ + EA+ +MK KG+ D + +L F I ++ A +L
Sbjct: 504 -NIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQL 562
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F+ +EK DV + + IV+ FS+
Sbjct: 563 FRR-------------------------MEKQYDVCHTTATYNI---------IVSAFSE 588
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A+K++ + + GC P TY +I+ +C++ ++ K +E +K F +
Sbjct: 589 QLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTT 648
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+ ++ ++ +A+ ++ M KG P
Sbjct: 649 FGRVLNCLCVKDKVHEAVGIIHLMLQKGIVP 679
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/497 (22%), Positives = 207/497 (41%), Gaps = 77/497 (15%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYST 205
N+ P+ T S L+ + K ++A +LQ + ++ F+S + GY K M
Sbjct: 456 NLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKA 515
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ V +M ++ ++ Y +++ Y+K G+ + E KSR+L+ S ++ IL
Sbjct: 516 VDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEE---SNVIFDIL 572
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK-- 323
++L + GR EA DM KGI D YASLI + A + +E +EK
Sbjct: 573 LNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNI 632
Query: 324 ------------GMLR----DPE-VCLKLVLM---------------YIEEGLVEKTLDV 351
G+LR DP VC +++ + Y +G E LD+
Sbjct: 633 RFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDI 692
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAA---------------------------- 383
+ MK+ + + ++ G K A
Sbjct: 693 LNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSR 752
Query: 384 -------VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
++++E+L++ G Y ++I +CR+ + KA+ V EM ++G +V
Sbjct: 753 SEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVT 812
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA----KNLRQVEKLW 492
Y++++ Y + A+ ++M G PN+ YN+L+ A + + + EKL
Sbjct: 813 YNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLV 872
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
EM R + P+ +Y ++S Y R + + E G V +++ ++K
Sbjct: 873 SEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKS 932
Query: 553 SQIEELVKLLQDMKSEG 569
++ E +LL D+ ++G
Sbjct: 933 GKMIEARELLNDLLTKG 949
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 183/439 (41%), Gaps = 49/439 (11%)
Query: 167 KFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQ 226
+ K + + Q I + + L+ + + + Y K + +Y+KM GI+ D
Sbjct: 302 RLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSS 361
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
I+ + + G + A LF E LD S Y + +SL KSGR EA M
Sbjct: 362 ILYGFCRHGKLTEAAVLFREMYEMGLDPNHVS---YATIINSLFKSGRVMEAFNLQSQMV 418
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
+GI D +++ + + K AEE+F+ + + + L+ Y + G +E
Sbjct: 419 VRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKME 478
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
V++ M+ + + +I+NG++K+ AV V +++ + +P + YA +I
Sbjct: 479 LAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILI 538
Query: 407 NAY------------C-----------------------RIALYSKAEKVFIEMQQKGFD 431
+ Y C R+ +A + I+M KG D
Sbjct: 539 DGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGID 598
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK- 490
+V Y+S++ Y K G A+ +V +MK K +V YN+L+ K L ++ K
Sbjct: 599 PDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALI------KGLLRLGKY 652
Query: 491 ----LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ M + PD ++Y T+I+ Y + + + NE + G + + I++
Sbjct: 653 DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILI 712
Query: 547 GVFSKLSQIEELVKLLQDM 565
G K +E+ L +M
Sbjct: 713 GGLCKTGAVEKAESALDEM 731
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 118/583 (20%), Positives = 229/583 (39%), Gaps = 55/583 (9%)
Query: 32 FSTCKAFPFVTVNPSSIINHRFFQVNASTNFPTIELN-RDSHHQTAVPDAKKFDSFLHGM 90
FS +A V P N +Q NAS ++L D VPD + +H +
Sbjct: 82 FSHMRALGLVPTLP--FWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSL 139
Query: 91 LKDPQTQ-ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVL 149
K L Y N+ + + T +I Q D L + +
Sbjct: 140 CKVGDLDLALGYLRNNDVVDI-----DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLC 194
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTIL 207
D+ TC+ LV R + A ++ + DG + ++ N+ + GY + +
Sbjct: 195 FDSITCNILVKGYCRIGLVQYAEWVMYNLV-DGGVTKDVIGLNTLIDGYCEAGLMSQATE 253
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ E + + +D Y +++A+ K GD + +LF
Sbjct: 254 LIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLF----------------------- 290
Query: 268 SLGKSGRAFEALKFFRD---MKEKGILEDPSI---------YASLICSFASITEVKLAEE 315
E L F++D +K ++ I Y +LI ++ V+ +
Sbjct: 291 --------NEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHS 342
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L+K+ G++ D C ++ + G + + + M L + I+N
Sbjct: 343 LYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLF 402
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A + Q++ +G VT ++++ ++ +AE+VF + + V
Sbjct: 403 KSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCV 462
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
YS+++ Y K G++ A ++ KM+ + PNV ++S+++ + + L + + +EM
Sbjct: 463 TYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREM 522
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+R V P+ + Y +I Y +A E D+ F E + I I++ ++ ++
Sbjct: 523 VQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRM 582
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+E L+ DM S+G D Y S ++ G Q+ A + Q
Sbjct: 583 DEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQ 625
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 110/513 (21%), Positives = 209/513 (40%), Gaps = 52/513 (10%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+PD S L+G + + E A + E ++ P + +I L +S +
Sbjct: 353 MPDVVTCSSILYGFCRHGKLTEAAV-LFREMYEMG-LDPNHVSYATIINSLFKSGRVMEA 410
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL----LAFNSA 192
+L + + D TC+ ++ + K K A +VF T ++ L + +++
Sbjct: 411 FNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAE---EVFETILKLNLAPNCVTYSAL 467
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ GY KL LV +KM+ + + + I+ Y K G K + E R +
Sbjct: 468 LDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNV 527
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
P +T +Y IL D K+G A F ++MK + + E I+ L+ + + +
Sbjct: 528 --MP-NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDE 584
Query: 313 AEELFKEAEEKGMLRDPEVC--LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A L + KG+ DP++ L+ Y +EG L +V+ MK ++ A+
Sbjct: 585 ARSLIIDMYSKGI--DPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNAL 642
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+ G R G + V ++I G P +TY +IIN Y
Sbjct: 643 IKGLL-RLGKYDPRYVCSRMIELGLAPDCITYNTIINTY--------------------- 680
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
C+ G+ DA+ ++ +MK+ G PN YN L+ + + + E
Sbjct: 681 --CI------------KGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAES 726
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
EM + P +++ ++ AY+R+ + D ++ + + +G + + ++ VF
Sbjct: 727 ALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFC 786
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+L + +L +M G D Y++ +
Sbjct: 787 RLGMTRKAKVVLDEMVKRGISADLVTYNALIRG 819
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/509 (20%), Positives = 205/509 (40%), Gaps = 31/509 (6%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTL--KL 122
+++ R+ + +P+ + + G K + Q++A D+ E K R E+S + +
Sbjct: 516 VDVLREMVQRNVMPNTIVYAILIDGYFKAGE-QDVADDFCKEMKSR---RLEESNVIFDI 571
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-- 180
L+ L + + D SL D + PD + L+ FK N L + I
Sbjct: 572 LLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDG-----YFKEGNQLAALSIVQE 626
Query: 181 ----DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
+ ++A+N+ + G +L Y V +M G+ D Y I+ Y G
Sbjct: 627 MKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTIINTYCIKGK 685
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+E + E KS + + Y IL L K+G +A +M + P
Sbjct: 686 TEDALDILNEMKSYGIMPNAVT---YNILIGGLCKTGAVEKAESALDEMLVMEFVPTPIT 742
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
+ L+ +++ + ++ ++ G+ V L+ ++ G+ K V++ M
Sbjct: 743 HKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMV 802
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII----NAYCRI 412
+ A++ G+ A+K Y Q+ G P TY +++ NA
Sbjct: 803 KRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLME 862
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+ + EK+ EM ++G Y +V+ YG+ G + + L +M KG P + Y
Sbjct: 863 EMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTY 922
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY---NRAREFDMCVKFYNE 529
N L+ + ++ + + +L ++ + P+ +Y + + + E D +K E
Sbjct: 923 NVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYE 982
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ +I+ G+ FSK ++I L
Sbjct: 983 IEVKKLLIEMGRKGLK---FSKKAEIRRL 1008
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 151/365 (41%), Gaps = 25/365 (6%)
Query: 256 PFSTHMYKILCDSLGK----SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
P TH+Y +L + R A F M+ G++ + +L+ F + V
Sbjct: 52 PTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVS 111
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
+ ++ + G++ D LV + G ++ L + + N + I + ++
Sbjct: 112 QVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNTVI 169
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
GF ++ + +++ +G +T ++ YCRI L AE V + G
Sbjct: 170 WGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVT 229
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
K V+ ++++ Y + G + A L+ + ++ YN+L+ + +L + E L
Sbjct: 230 KDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESL 289
Query: 492 -------WKEMERRK------------VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
WK+ +R K + P V+YTT+I+AY + + Y + M
Sbjct: 290 FNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIM 349
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
NG + D ++ F + ++ E L ++M G + Y + +N+L +G M+
Sbjct: 350 NGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVME 409
Query: 593 AQWLQ 597
A LQ
Sbjct: 410 AFNLQ 414
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/503 (21%), Positives = 217/503 (43%), Gaps = 48/503 (9%)
Query: 104 YNEAKKL----PEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
+NEA L E RP S + L+ + + KK+D +++L + +I V D +TC+
Sbjct: 52 FNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNL 111
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+ ++ + +A++ L + G E + F S + G+ + + + +M G
Sbjct: 112 LMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMG 171
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
I D Y I+++ K G + +LF + ++ + MY L + L SGR
Sbjct: 172 IKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRP---DVVMYTSLVNGLCNSGRWR 228
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+A R M ++ I D + +LI +F ++ A+EL+ E ++
Sbjct: 229 DADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNE---------------MI 273
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
M I + T +++NG A +++ + ++GC
Sbjct: 274 QMSIAPNIFTYT--------------------SLINGLCMEGRLDEARQMFYLMETKGCF 313
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P V Y S+IN +C+ A K+F EM QKG + Y++++ +G G+ A +
Sbjct: 314 PDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEV 373
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK---VTPDKVSYTTVISA 513
M ++G PN+ YN L+ + + ++++M++R+ V P+ +Y ++
Sbjct: 374 FGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHG 433
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ + + + + + I I++ K ++++ + L + S+G K +
Sbjct: 434 LCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPN 493
Query: 574 ERLYHSAMNALRDAGLQMQAQWL 596
Y + ++ L GL ++A L
Sbjct: 494 VVTYTTMISGLFREGLMLEAHVL 516
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 180/429 (41%), Gaps = 46/429 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F S ++G + +E A N+ ++ +P+ +I L ++ D+ +
Sbjct: 139 PDIFTFTSLINGFCLGNRIEE-AMSMVNQMVEM-GIKPDVVIYTTIIDSLCKNGHVDNAL 196
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
SL + Y + PD + LV + +++ A+ LL+ + + ++ FN+ + +
Sbjct: 197 SLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAF 256
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLDS 254
K +Y +M I + Y ++ G ++ +F +E K D
Sbjct: 257 VKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDV 316
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+++ L + K + +A+K F +M +KG+ + Y +LI F + + +A+
Sbjct: 317 VAYTS-----LINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQ 371
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
E+F +G+ P + VL++ G V K L + E M+ ++
Sbjct: 372 EVFGHMVSRGV--PPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREI------------ 417
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G P TY +++ C KA VF +MQ++ D
Sbjct: 418 --------------------DGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDI 457
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
++ Y+ ++ K G+++DA+ L + +KG +PNV Y +++ R + + L+
Sbjct: 458 GIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLF 517
Query: 493 KEMERRKVT 501
++M+ V+
Sbjct: 518 RKMKEDGVS 526
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 106/499 (21%), Positives = 203/499 (40%), Gaps = 18/499 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNE--AKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
PD +++ + G K+ + A D + E + +P P+ T ++ L +++ D
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNK-ACDLFKEMVQRGIP---PDLVTYSSVVHALCKARAMDK 274
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-----QVFITDGEIALLAFN 190
+ VLPD T + L+ ++K A + Q + D ++A N
Sbjct: 275 AEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD----VVALN 330
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ MG K V++ M G D Y ++ Y G + LF
Sbjct: 331 TLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLF---DLM 387
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
D + +L + G +A+ F +M++ G+ Y ++I + I ++
Sbjct: 388 LGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKM 447
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A E F + ++G++ D L+ + G + K +++ + N +++ +I
Sbjct: 448 DDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSI 507
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+N K A +++ ++ G P V Y +++ YC + KA +VF M G
Sbjct: 508 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+ VV Y ++V Y K GRI + + L +M KG +P+ +YN ++D A +
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
+ EM + +K +Y+ V+ + R FD + + E R ID M+
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 687
Query: 551 KLSQIEELVKLLQDMKSEG 569
+ ++EE L + G
Sbjct: 688 QTRRVEEAKDLFASISRSG 706
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 138/334 (41%), Gaps = 42/334 (12%)
Query: 242 ALFLECKSRKLDSTPFS--THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
ALF SR S ++ Y IL D ++ R AL FF + G+ D I +
Sbjct: 94 ALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASH 153
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEV-CLKLVLMYIEEGLVEKTLDVVESMKNA 358
L+ F E K +E A + + R PE+ C+ V Y N
Sbjct: 154 LLKGFC---EAKRTDE----ALDILLHRTPELGCVPDVFSY-----------------NI 189
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG---CIPGQVTYASIINAYCRIALY 415
LK S C +G +++++G C P V Y ++I+ + +
Sbjct: 190 LLK-SLC-----------NQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDV 237
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+KA +F EM Q+G +V YSS+V K + A + +M KG P+ W YN+L
Sbjct: 238 NKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNL 297
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ + ++ +++KEM R+ + PD V+ T++ + + + ++ M G
Sbjct: 298 IYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQ 357
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
D IM+ ++ + ++ L M +G
Sbjct: 358 NPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG 391
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/364 (19%), Positives = 134/364 (36%), Gaps = 39/364 (10%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIAN 172
+P T +I L + K D + V+PD + L+ C K
Sbjct: 428 KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKE 487
Query: 173 TLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+ ++ + ++ F S + KL +++ + G+ D+ Y +M+ Y
Sbjct: 488 LISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYC 547
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+G EK +F S ++ Y L + K GR E L FR+M +KGI
Sbjct: 548 LVGKMEKALRVFDAMVSAGIEPNVVG---YGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 604
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+Y +I A+ F E E G
Sbjct: 605 STILYNIIIDGLFEAGRTVPAKVKFHEMTESG---------------------------- 636
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ ++ C ++ G K R + A+ ++++L + +T ++I +
Sbjct: 637 -------IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 689
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+A+ +F + + G C V YS M+ K G + +A + + M+ GCEP+ +
Sbjct: 690 RRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLL 749
Query: 473 NSLM 476
N ++
Sbjct: 750 NHVV 753
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 98/206 (47%), Gaps = 5/206 (2%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE-MQQKGFDKCVVAYSSMV 441
A+ + QL+ G + + ++ +C +A + + + G V +Y+ ++
Sbjct: 132 ALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILL 191
Query: 442 AMY---GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
GK+G+ D + ++A+ C P+V YN+++D + ++ + L+KEM +R
Sbjct: 192 KSLCNQGKSGQADDLLRMMAE-GGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQR 250
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ PD V+Y++V+ A +AR D F + G + D ++ +S Q +E
Sbjct: 251 GIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEA 310
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNAL 584
V++ ++M+ + D ++ M +L
Sbjct: 311 VRVFKEMRRQSILPDVVALNTLMGSL 336
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 166/383 (43%), Gaps = 6/383 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+++M S G+V Y I+ AY + G L K ++ + + Y + +
Sbjct: 156 VFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILT---YNTVIN 212
Query: 268 SLGKSGRAFEA-LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ + G +E L F +M+ +GI D Y +L+ + A AE +F+ E G++
Sbjct: 213 ACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIV 272
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVK 385
D LV + + +EK +++ M+ + D S ++ +++ A+
Sbjct: 273 PDINTYSYLVQTFGKLNRLEKVSELLREMECGG-NLPDITSYNVLLEAYAELGSIKEAMG 331
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
V+ Q+ + GC+ TY+ ++N Y + Y +F+EM+ D Y+ ++ ++G
Sbjct: 332 VFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFG 391
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+ G ++ + L M + EPN+ Y L+ G+ +K+ M + V P
Sbjct: 392 EGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSK 451
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+YT VI A+ +A ++ + +N G ++ F++ +E +L M
Sbjct: 452 AYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRM 511
Query: 566 KSEGTKLDERLYHSAMNALRDAG 588
G K D ++ + A R G
Sbjct: 512 NESGLKRDVHSFNGVIEAFRQGG 534
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 189/439 (43%), Gaps = 40/439 (9%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTI 206
++PD +T S LV + + + + + LL+ G + + ++N + Y +L +
Sbjct: 271 IVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAM 330
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
V+ +M++AG V ++ Y ++ Y K G + V LFLE K D Y IL
Sbjct: 331 GVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDP---DAGTYNILI 387
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
G+ G E + F DM E+ + + Y LI FA + G+
Sbjct: 388 QVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLI--FA--------------CGKGGLY 431
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D + K++L E+G+V S ++ F + Y A+ +
Sbjct: 432 EDAK---KILLHMNEKGVVP----------------SSKAYTGVIEAFGQAALYEEALVM 472
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ + G P TY S+I+A+ R LY +AE + M + G + V +++ ++ + +
Sbjct: 473 FNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQ 532
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G+ +A+ +M+ CEPN +++ ++ A + + E+ ++E++ + P +
Sbjct: 533 GGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMC 592
Query: 507 YTTVISAYNRAREFDMCVKFYNE-FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
Y +++ Y + + + M I + I ++ G F S + + + +
Sbjct: 593 YCMMLALYAKNDRLNDAYNLIDAMITMRVSDIHQVIGQMIKGDFDDESNWQIVEYVFDKL 652
Query: 566 KSEGTKLDERLYHSAMNAL 584
SEG L R Y++ + AL
Sbjct: 653 NSEGCGLGMRFYNALLEAL 671
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 128/281 (45%), Gaps = 1/281 (0%)
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E+F E G++R ++ Y G +L+++ MK ++ S ++N
Sbjct: 155 EVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINAC 214
Query: 375 SKRRGYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
++ W + ++ ++ +G P +TY +++ A L +AE VF M + G
Sbjct: 215 ARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPD 274
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ YS +V +GK R+ L+ +M+ G P++ YN L++ + ++++ +++
Sbjct: 275 INTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFR 334
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
+M+ + +Y+ +++ Y + +D + E +++ D I++ VF +
Sbjct: 335 QMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGG 394
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+E+V L DM E + + + Y + A GL A+
Sbjct: 395 YFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAK 435
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 127/266 (47%), Gaps = 14/266 (5%)
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D E + + G + + LD KN KL ++D + F++R + +++++
Sbjct: 68 DVETLINRLTALPPRGSIARCLD---PFKN-KLSLNDF--ALVFKEFAQRGDWQRSLRLF 121
Query: 388 EQLISQ-GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ + Q C P + + +I R L K +VF EM G + V +Y++++ YG+
Sbjct: 122 KYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGR 181
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK-NLRQVEKLWKEMERRKVTPDKV 505
G+ ++ L+ MK + P++ YN++++ R + + L+ EM + PD +
Sbjct: 182 NGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVI 241
Query: 506 SYTTVISA---YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+Y T++ A E +M + NE +G V D +V F KL+++E++ +LL
Sbjct: 242 TYNTLLGACAHRGLGDEAEMVFRTMNE---SGIVPDINTYSYLVQTFGKLNRLEKVSELL 298
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAG 588
++M+ G D Y+ + A + G
Sbjct: 299 REMECGGNLPDITSYNVLLEAYAELG 324
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 192/436 (44%), Gaps = 36/436 (8%)
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE 183
+R LV++ + + E +PD C+ L+ R K K A ++++ G
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 184 IA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVL----------DSGCYCQIMEAY- 231
+ ++ +N + GY K + + V ++M A V+ DSG Q ME
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 232 -------------YKI------GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKS 272
Y I +S A+ L + R S P Y +L + + K
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKP-DVVTYNVLINGICKE 299
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
GR EA+KF +M G + + ++ S S AE+L + KG P V
Sbjct: 300 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC--SPSVV 357
Query: 333 LKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
+L+ +GL+ + +D++E M + +++GF K + A++ + +
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+S+GC P VTY +++ A C+ A ++ ++ KG ++ Y++++ K G+
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 477
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
A+ L+ +M+ KG +P++ Y+SL+ R + + K + ++E + P+ ++Y ++
Sbjct: 478 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 537
Query: 511 ISAYNRAREFDMCVKF 526
+ ++R+ D + F
Sbjct: 538 MLGLCKSRQTDRAIDF 553
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 148/341 (43%), Gaps = 3/341 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L KSG AL+ M + D Y +++ + ++K A E+
Sbjct: 187 YNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQL 243
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+K D L+ +E V + + +++ M+N K ++NG K
Sbjct: 244 QKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD 303
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+K + S GC P +T+ I+ + C + AEK+ +M +KG VV ++ ++
Sbjct: 304 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 363
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ G + A+ ++ KM GC PN YN L+ + K + + + M R
Sbjct: 364 NFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY 423
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD V+Y T+++A + + D+ V+ N+ G ++ SK+ + E +KL
Sbjct: 424 PDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKL 483
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
L +M+ +G K D Y S ++ L G +A + EG
Sbjct: 484 LDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 524
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 188/425 (44%), Gaps = 11/425 (2%)
Query: 163 VRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
VR + + L+ + G+I ++ S + G+ ++ V E ++ +G V D
Sbjct: 125 VRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 184
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y ++ Y K G+ + A L+ + D ++T + + LCDS G+ +A++
Sbjct: 185 ITYNVLISGYCKSGEIDN-ALQVLDRMNVAPDVVTYNT-ILRTLCDS----GKLKQAMEV 238
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--Y 339
+K D Y LI + + V A +L E KG P+V VL+
Sbjct: 239 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKG--SKPDVVTYNVLINGI 296
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+EG +++ + + +M + + + I+ + A K+ ++ +GC P
Sbjct: 297 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 356
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
VT+ +IN CR L +A + +M G ++Y+ ++ + K ++ A+ +
Sbjct: 357 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 416
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M ++GC P++ YN+L+ + + ++ ++ + +P ++Y TVI ++ +
Sbjct: 417 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 476
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ +K +E R G D +V S+ +++E +K D++ G + + Y+S
Sbjct: 477 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNS 536
Query: 580 AMNAL 584
M L
Sbjct: 537 IMLGL 541
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 158/408 (38%), Gaps = 19/408 (4%)
Query: 76 AVPDAKKFDSFLHGMLKDPQTQEL--AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
AVPD ++ + G K + D N A P+ T ++R L S K
Sbjct: 180 AVPDVITYNVLISGYCKSGEIDNALQVLDRMNVA-------PDVVTYNTILRTLCDSGKL 232
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
+ + + PD T + L+ + + A LL G + ++ +N
Sbjct: 233 KQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVL 292
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG---DSEKVAALFLECKS 249
+ G K I M S G + + I+ + G D+EK+ + L
Sbjct: 293 INGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML---- 348
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
RK S T + IL + L + G A+ M G + Y L+ F +
Sbjct: 349 RKGCSPSVVT--FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 406
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
+ A E +G D L+ ++G V+ ++++ + +
Sbjct: 407 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 466
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++G SK A+K+ +++ +G P +TY+S+++ R +A K F +++ G
Sbjct: 467 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 526
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
+ Y+S++ K+ + A+ +A M +K C+P Y L++
Sbjct: 527 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIE 574
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 127/320 (39%), Gaps = 4/320 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P+ T +LI + + + D + + Y P+ T + ++ S ++ A
Sbjct: 283 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 342
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
LL + G +++ FN + + + I + EKM G +S Y ++ +
Sbjct: 343 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 402
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K ++ A +L+ + T Y L +L K G+ A++ + KG
Sbjct: 403 KEKKMDR-AIEYLDIMVSRGCYPDIVT--YNTLLTALCKDGKVDVAVEILNQLSSKGCSP 459
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
Y ++I + + + + A +L E KG+ D LV EG V++ +
Sbjct: 460 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 519
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
++ ++ + +I+ G K R A+ +IS+ C P + TY +I
Sbjct: 520 HDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYE 579
Query: 413 ALYSKAEKVFIEMQQKGFDK 432
L +A + E+ +G K
Sbjct: 580 GLAKEALDLLNELCSRGLVK 599
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 142/305 (46%), Gaps = 3/305 (0%)
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
K + + ++G+L D Y ++I ++ + +A F+ E GM D C L+L Y
Sbjct: 169 KLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGY 228
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
G + K ++ M + ++ ++ G + R A+ + ++ GC P
Sbjct: 229 CRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNL 288
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
TY +I C+ A + EM ++G V Y++M+ Y K+GR++DA+ +
Sbjct: 289 HTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTL 348
Query: 460 MKAKGCEPNVWIYNSLMDMHGR-AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
M+ GC P+ W YNSL +HG + E+L R +P +++T +I+ Y +A
Sbjct: 349 MEGNGCNPDDWTYNSL--IHGLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAE 406
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ D ++ + + +D G+++ V K +++E L ++ + G + +Y
Sbjct: 407 KIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYT 466
Query: 579 SAMNA 583
S ++A
Sbjct: 467 SIIDA 471
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 112/563 (19%), Positives = 219/563 (38%), Gaps = 61/563 (10%)
Query: 78 PDAKKFDSFLHGML--KDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
PD ++S +HG+ K + +EL F P T +I +++K D
Sbjct: 356 PDDWTYNSLIHGLCGGKPDEAEELLNGAIARG-----FSPTVITFTNIINGYCKAEKIDD 410
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA-NTLLQVFITDGEIALLAFNSAMG 194
+ + D L++ ++ + K A +TL ++F ++ + S +
Sbjct: 411 ALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIID 470
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL--------- 245
Y K+ + + V++ + G ++ Y ++ + K AL
Sbjct: 471 AYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITP 530
Query: 246 -----------ECKSRKLDS-------------TPFSTHMYKILCDSLGKSGRAFEALKF 281
+CK + D+ TP Y +L D+L KSGRA EA F
Sbjct: 531 GVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTP-DEQAYNVLTDALCKSGRAEEAYSF 589
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+ +KG++ Y SL+ F+ + A L ++ +G D L+ +
Sbjct: 590 ---LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCK 646
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
+ + + L +++ M +K + I++ K + A ++ ++IS G P +T
Sbjct: 647 QKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAIT 706
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y I++YC+I +A + EM++ G VV Y+ + G G + A + +M
Sbjct: 707 YTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMI 766
Query: 462 AKGCEPNVWIY---------NSLMDMH----GRAKNLRQVEKLWKEMER---RKVTPDKV 505
CEPN W Y SL + H N +++ +W+ +ER + P V
Sbjct: 767 DASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAV 826
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y+++I+ + +A + + + I +++ + E+ + +M
Sbjct: 827 TYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNM 886
Query: 566 KSEGTKLDERLYHSAMNALRDAG 588
G + YH + L D G
Sbjct: 887 IECGFQPHLESYHYLITGLCDEG 909
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 136/340 (40%), Gaps = 12/340 (3%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D + H Y +L L K GR +A +M +G++ Y ++I + +K
Sbjct: 282 DGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKD 341
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL----KISDCISC 368
A + E G D L+ GL D E + N + +
Sbjct: 342 ALGIKTLMEGNGCNPDDWTYNSLI-----HGLCGGKPDEAEELLNGAIARGFSPTVITFT 396
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
I+NG+ K A++V +IS C Y +I+ + +A+ E+
Sbjct: 397 NIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFAN 456
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G VV Y+S++ Y K G++ A+ + + +GC PN W Y+SL+ + + L +
Sbjct: 457 GLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKA 516
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
L +M+ +TP ++YTT+I + EFD + + NG D ++
Sbjct: 517 MALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDA 576
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
K + EE L +G L + Y S ++ AG
Sbjct: 577 LCKSGRAEEAYSFLV---KKGVVLTKVTYTSLVDGFSKAG 613
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 176/402 (43%), Gaps = 15/402 (3%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ FN + GY K Y +MK+ G+V DS + I YK G + ++
Sbjct: 325 ITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVH---- 380
Query: 247 CKSRKLDSTPFSTHMY----KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
D F +HM +L L R +A + R E+G + + +LI
Sbjct: 381 ------DHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIA 434
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+++ + A EL++ + G+ L++ +G +++ ++E M + +
Sbjct: 435 AYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCL 494
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
S + + F + A+K ++ + G P + +++ IN CR+ ++A + F
Sbjct: 495 STSFTICLDASFREGNAV-CALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAF 553
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
EM +G Y+S+++ + G + +A+ L M+ G P+++ N L+D R
Sbjct: 554 AEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCRE 613
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
L V+ L +M +TPD V+Y T+I+AY RA++ + + F N+ G D
Sbjct: 614 GKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTY 673
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
I + + + K+L ++ + G D Y++ M+ +
Sbjct: 674 NIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGI 715
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 1/228 (0%)
Query: 333 LKLVL-MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L+L L ++ G+ + LDV+ ++ + S A++ + AA V+E++
Sbjct: 152 LRLALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMA 211
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
++G P T+ ++I +C L A + M + G V +Y+ ++ + G R
Sbjct: 212 ARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSR 271
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
DA L +M GCEP V YN L+D+ + + +L+ EM + + + +++ +I
Sbjct: 272 DAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLI 331
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
Y + D Y E + G V D I+ K +LV
Sbjct: 332 DGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLV 379
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 137/345 (39%), Gaps = 48/345 (13%)
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
LL+ I G +++ FN+ + Y+K ++ +Y M G+ S + ++
Sbjct: 413 LLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLC 472
Query: 233 KIGDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
G ++ A L LE K ST F+ I D+ + G A ALK + DM + G+
Sbjct: 473 NQGRLDE-AQLLLEHMVSKGYCLSTSFT-----ICLDASFREGNAVCALKCWDDMGKLGL 526
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
D +++ I + V A + F E +G++ + ++ G + + L
Sbjct: 527 QPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALK 586
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ ++M+ L S +++G + + + S G P VTY +IINAYC
Sbjct: 587 LQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYC 646
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
R + AM + KM A GCEP+++
Sbjct: 647 R-----------------------------------AKDMNSAMNFMNKMLAAGCEPDIF 671
Query: 471 IYNSLMDMHGRAKN--LRQVEKLWKEMERRKVTPDKVSYTTVISA 513
YN + MH N L Q K+ E+ PD V+Y T++
Sbjct: 672 TYN--IWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDG 714
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 162/425 (38%), Gaps = 62/425 (14%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+L FN+ + G+ + + M GIV + Y +++ + G S LF
Sbjct: 218 SLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLF 277
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E + T + Y IL D L GR EA + F +M + GI + + LI +
Sbjct: 278 EEMHRSGCEPTVVT---YNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGY 334
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM-----YIEEGLVEKTLDVVESMKNAK 359
A + A ++E + +G++ P+ C ++ + + D+ S A
Sbjct: 335 AKTGRMDQACAAYREMKARGLV--PDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLAD 392
Query: 360 ----LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
L C C + + + RG I QG + ++I AY + L+
Sbjct: 393 GMDMLVCRLCWDCRLDDAWELLRGA----------IEQGAPLSVTGFNALIAAYSKEGLH 442
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG-CEPNVWIYNS 474
+A +++ M + G ++ ++ GR+ +A L+ M +KG C +
Sbjct: 443 EEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTS--FTI 500
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+D R N K W +M + + PD +++ SAY +NG
Sbjct: 501 CLDASFREGNAVCALKCWDDMGKLGLQPDFIAF----SAY-----------------ING 539
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+L + E + +M + G + Y+S ++AL AG +A
Sbjct: 540 --------------LCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEAL 585
Query: 595 WLQQN 599
LQQN
Sbjct: 586 KLQQN 590
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%)
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A VF EM +G + +++M+ + G +R A L+ M G PNV YN L+
Sbjct: 203 AWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIK 262
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
H R KL++EM R P V+Y ++ + ++E G
Sbjct: 263 GHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQA 322
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ +++ ++K ++++ ++MK+ G D
Sbjct: 323 NTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPD 358
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 59/330 (17%), Positives = 133/330 (40%), Gaps = 16/330 (4%)
Query: 141 EDFKIYNVL------PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMG 194
E F++Y ++ P + T + L+ + A LL+ ++ G +F +
Sbjct: 444 EAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLD 503
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
+ + ++ M G+ D + + ++ + F E +R +
Sbjct: 504 ASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVP 563
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS--LICSFASITEVKL 312
F+ Y + +L ++G EALK ++M++ G++ P IY S LI ++++
Sbjct: 564 NNFT---YNSIISALCRAGNMTEALKLQQNMRQNGLV--PDIYTSNILIDGLCREGKLEM 618
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-V 371
+ L + G+ D ++ Y + ++ + M A + D + I +
Sbjct: 619 VDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCE-PDIFTYNIWM 677
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ A KV ++L++ GC P VTY ++++ C L +A + + + F
Sbjct: 678 HSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICSDVL-DRAMILTGRLIKMAFQ 736
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ + ++ + K G + A+ K++
Sbjct: 737 PNTITLNVFLSHFCKQGFGKRALMWAEKLR 766
>gi|449447783|ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Cucumis sativus]
Length = 1020
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/468 (20%), Positives = 202/468 (43%), Gaps = 60/468 (12%)
Query: 139 LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNK 198
L+E F+I +P+ S V +CVR K ++ +T +N+ + Y K
Sbjct: 292 LTELFRIGTRIPN-RKVSPEVDNCVR--KPRLTST---------------YNTLIDLYGK 333
Query: 199 LHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFS 258
V+ +M + GI +D+ + ++ G + L L+ + R L +P
Sbjct: 334 AGRLKDAANVFGEMLTTGISMDTITFNTMIYTCGSHGHLAEAETLLLKMEERGL--SP-D 390
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
T Y I +G ALK +R ++E G+ D + +L+ + V+ E +
Sbjct: 391 TKTYNIFLSLYANNGNIDGALKCYRRIREVGLFPDVVTHRALLHVLSERNMVEDVENVIA 450
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E E+ +L D +++ MYI EGL+++ ++E + ++S IS AI++ ++++
Sbjct: 451 EMEKSHILLDEHSLPRVIKMYINEGLLDRAKILLEKYR-LDTELSPRISAAIIDAYAEK- 508
Query: 379 GYW-------------------------------------AAVKVYEQLISQGCIPGQVT 401
G W A +++ + ++G P + T
Sbjct: 509 GLWFEAESIFLWKRDLSGKKMDVMEYNVMIKAYGKAELYEKAFLLFKSMKNRGTWPDECT 568
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y S+I + L +A ++ EMQ+ GF +S+++A Y + G + DA+ + M
Sbjct: 569 YNSLIQMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVEVYDMMV 628
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
EPN +Y L++ + K ++ ME+ + +++ T++I A+++ +
Sbjct: 629 HADVEPNEILYGVLVNGFAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAFSKVGSLE 688
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ YN + D + M+ +++ L + E ++ +D++ G
Sbjct: 689 DARRIYNRMKNMEDGADTIASNSMINLYADLGMVSEAKQVFEDLRERG 736
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/439 (19%), Positives = 198/439 (45%), Gaps = 13/439 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD K ++ FL + + + A Y +++ F P+ T + L+ L + + +
Sbjct: 389 PDTKTYNIFL-SLYANNGNIDGALKCYRRIREVGLF-PDVVTHRALLHVLSERNMVEDVE 446
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
++ + + ++L D H+ R++ + A LL+ + D E++ + + Y
Sbjct: 447 NVIAEMEKSHILLDEHSLPRVIKMYINEGLLDRAKILLEKYRLDTELSPRISAAIIDAYA 506
Query: 198 KLHMYYS--TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ +++ +I ++ K +G +D Y +++AY G +E FL KS K T
Sbjct: 507 EKGLWFEAESIFLW-KRDLSGKKMDVMEYNVMIKAY---GKAELYEKAFLLFKSMKNRGT 562
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
Y L EA + +M+ G ++++I S+A + + A E
Sbjct: 563 WPDECTYNSLIQMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVE 622
Query: 316 LFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
++ + +P L VL+ + E G E+ L M+ + + + + +++
Sbjct: 623 VYDMMVHADV--EPNEILYGVLVNGFAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKA 680
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
FSK A ++Y ++ + + S+IN Y + + S+A++VF +++++G+
Sbjct: 681 FSKVGSLEDARRIYNRMKNMEDGADTIASNSMINLYADLGMVSEAKQVFEDLRERGYADG 740
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V++++M+ +Y G + +A+ + +MK G + + +++ + +R+ +L
Sbjct: 741 -VSFATMIYLYKNIGMLDEAIEVAEEMKESGLLRDATSFRKVIECYAINGQVRECGELLH 799
Query: 494 EMERRKVTPDKVSYTTVIS 512
EM RK+ PD ++ + +
Sbjct: 800 EMVTRKLLPDNRTFNVLFT 818
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 154/369 (41%), Gaps = 29/369 (7%)
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
E+V +F KS+K D P H Y I+ +LG++ + E + +M E G++ + Y
Sbjct: 142 ERVIQVFQWFKSQK-DYVPNVIH-YNIVLRTLGQAQKWDELRLCWNEMAENGVVPTNNTY 199
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
LI + + VK A K +G+ D EV + V+ ++ D E
Sbjct: 200 GMLIDVYGKVGLVKEALLWIKHMTVRGIFPD-EVTMNTVVRVLK--------DAGEFDSA 250
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
K C +N F +V + ++ P + + + RI
Sbjct: 251 DKFYKDWCRGLVELNDFDLNS------RVEDFGVNSAVEPITPKHFLLTELF-RIGTRIP 303
Query: 418 AEKVFIEMQQKGFDKCV------VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
KV E+ D CV Y++++ +YGK GR++DA + +M G +
Sbjct: 304 NRKVSPEV-----DNCVRKPRLTSTYNTLIDLYGKAGRLKDAANVFGEMLTTGISMDTIT 358
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+N+++ G +L + E L +ME R ++PD +Y +S Y D +K Y R
Sbjct: 359 FNTMIYTCGSHGHLAEAETLLLKMEERGLSPDTKTYNIFLSLYANNGNIDGALKCYRRIR 418
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
G D ++ V S+ + +E++ ++ +M+ LDE + + GL
Sbjct: 419 EVGLFPDVVTHRALLHVLSERNMVEDVENVIAEMEKSHILLDEHSLPRVIKMYINEGLLD 478
Query: 592 QAQWLQQNF 600
+A+ L + +
Sbjct: 479 RAKILLEKY 487
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 190/418 (45%), Gaps = 25/418 (5%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T LI+ D L + + P T S ++AS R A +
Sbjct: 564 PDECTYNSLIQMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVEV 623
Query: 175 LQVFI-TDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + D E + + + G+ ++ + + M+ +GI + +++A+ K
Sbjct: 624 YDMMVHADVEPNEILYGVLVNGFAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAFSK 683
Query: 234 IGDSEKVAALFLECKSRKLDS-TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+G E ++ K+ + + T S M + D G EA + F D++E+G +
Sbjct: 684 VGSLEDARRIYNRMKNMEDGADTIASNSMINLYADL----GMVSEAKQVFEDLRERGYAD 739
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
S +A++I + +I + A E+ +E +E G+LRD K++ Y G V + +++
Sbjct: 740 GVS-FATMIYLYKNIGMLDEAIEVAEEMKESGLLRDATSFRKVIECYAINGQVRECGELL 798
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA--SIINA-Y 409
M KL + D + ++ F+ + ++ QL + + TYA +II A +
Sbjct: 799 HEMVTRKL-LPDNRTFNVL--FTILKKGVIPLEAVSQL--ESAFHEEKTYARQAIIAAVF 853
Query: 410 CRIALYSKAEK---VFI--EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+ L++ A + F+ E+Q F AY+ + YG +I A+ + KMK +
Sbjct: 854 SGLGLHASALESCDTFLKAEVQLDSF-----AYNVAIYAYGAAEKIDKALNIFMKMKDQN 908
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
+P++ Y +L+ +G+A + V++++ +++ ++ +K + +I+ + A +D+
Sbjct: 909 LKPDLVTYINLVGCYGKAGMIEGVKQIYSQLKYGEIELNKSLFFAIINTFRSAHRYDL 966
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/394 (18%), Positives = 155/394 (39%), Gaps = 55/394 (13%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ + Y +L D GK G EAL + + M +GI D +++ E A++ +
Sbjct: 195 TNNTYGMLIDVYGKVGLVKEALLWIKHMTVRGIFPDEVTMNTVVRVLKDAGEFDSADKFY 254
Query: 318 KE----------AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL--KISDC 365
K+ + + D V + + + L+ + + + N K+ ++ +C
Sbjct: 255 KDWCRGLVELNDFDLNSRVEDFGVNSAVEPITPKHFLLTELFRIGTRIPNRKVSPEVDNC 314
Query: 366 IS--------CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ +++ + K A V+ ++++ G +T+ ++I ++
Sbjct: 315 VRKPRLTSTYNTLIDLYGKAGRLKDAANVFGEMLTTGISMDTITFNTMIYTCGSHGHLAE 374
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
AE + ++M+++G Y+ +++Y G I A+ +++ G P+V + +L+
Sbjct: 375 AETLLLKMEERGLSPDTKTYNIFLSLYANNGNIDGALKCYRRIREVGLFPDVVTHRALLH 434
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN---- 533
+ + VE + EME+ + D+ S VI Y D ++R++
Sbjct: 435 VLSERNMVEDVENVIAEMEKSHILLDEHSLPRVIKMYINEGLLDRAKILLEKYRLDTELS 494
Query: 534 ----GGVID------------------RAIAG---------IMVGVFSKLSQIEELVKLL 562
+ID R ++G +M+ + K E+ L
Sbjct: 495 PRISAAIIDAYAEKGLWFEAESIFLWKRDLSGKKMDVMEYNVMIKAYGKAELYEKAFLLF 554
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ MK+ GT DE Y+S + L +A+ L
Sbjct: 555 KSMKNRGTWPDECTYNSLIQMFSGGDLVDEARRL 588
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/522 (20%), Positives = 212/522 (40%), Gaps = 75/522 (14%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA---------- 171
+L Y + WD I SL ++ K + PD +T + ++ +C++ + A
Sbjct: 254 MLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEA 313
Query: 172 ---------NTLLQVFITDG------------EIA-----LLAFNSAMGGYNKLHMYYST 205
N LL V+ G E A ++ +N + Y + +
Sbjct: 314 GCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEA 373
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ + + S G+ D YC ++ A+ + EK F E RK + TP + Y IL
Sbjct: 374 AALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEM--RKTNCTP-NIVTYNIL 430
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE--- 322
D G+ + + +K F+ M+EK D + SL+ SF + + +F+E +
Sbjct: 431 IDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGY 490
Query: 323 ---------------------------KGMLR---DPEVCLKLVLM--YIEEGLVEKTLD 350
KG+LR P V LM EG ++
Sbjct: 491 MPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEK 550
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP-GQVTYASIINAY 409
V + M A L++SD +++ ++ ++ K ++L P + + + AY
Sbjct: 551 VSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAY 610
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ + ++A+ ++ G + +++M++M K G I A+ L+ +++ +P+
Sbjct: 611 CKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDG 670
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
YN LM M+GR + E++ EM R P+ ++Y T++ +Y + D + + +
Sbjct: 671 VTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGD 730
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
D +VG +S L +E + +++ M G +
Sbjct: 731 MVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQ 772
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 177/380 (46%), Gaps = 4/380 (1%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS-EKVAALFLE 246
A+ S + ++ + I ++E M+ G ++ Y +++ Y K GDS +++ +LF E
Sbjct: 215 AYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQE 274
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
K L+ +P + Y + + ++ EAL+ F++MKE G + Y +L+ +
Sbjct: 275 MKD--LEISP-DDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGK 331
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
K A EL E E G+ + +L+ Y GL ++ + +S+ + L +
Sbjct: 332 GGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFT 391
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
C +++ F++ Y A++ + ++ C P VTY +I+ Y R+ KVF MQ
Sbjct: 392 YCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQ 451
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+K +V ++S++ +G G + + + +MK G P V +N L++ +GR +
Sbjct: 452 EKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVD 511
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
++K + R + P ++ ++++ R + C K E G + A ++
Sbjct: 512 YSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLI 571
Query: 547 GVFSKLSQIEELVKLLQDMK 566
++ Q +L K + +++
Sbjct: 572 HSYANSGQFFQLRKYIDELE 591
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 183/412 (44%), Gaps = 21/412 (5%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T LI ++++++ + + + N P+ T + L+ R K + +
Sbjct: 387 PDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKL---DDM 443
Query: 175 LQVFITDGE----IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
++VF E L+ +NS + + M V+ +MK AG + + ++E
Sbjct: 444 MKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIEC 503
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y + G + ++ L T + L SL + GR + K ++M E G+
Sbjct: 504 YGRCGYVDYSVDIYKGLLRTGLQPT---VPTFAALMASLAREGRWQQCEKVSQEMAEAGL 560
Query: 291 LEDPSIYASLICSFASITEV----KLAEELFKEAEEK--GMLRDPEVCLKLVLMYIEEGL 344
+ +A LI S+A+ + K +EL K A++ G+L C VL Y + G+
Sbjct: 561 QLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGIL-----CKTFVLAYCKCGM 615
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+ + + + + A+++ +KR AVK+ E++ P VTY
Sbjct: 616 DNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNC 675
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+++ Y R +Y KAE+V EM++ G ++ Y++++ Y K GR+ DA + M A
Sbjct: 676 LMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAAR 735
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
P+ + +N+L+ + ++ + + M P ++++ ++ YNR
Sbjct: 736 VRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNR 787
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/368 (18%), Positives = 155/368 (42%), Gaps = 39/368 (10%)
Query: 269 LGKSGRAFEALKFFRDMKE-KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
LG + AL+ F +K+ + D Y SLI + LF+ + +G R
Sbjct: 187 LGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQ-R 245
Query: 328 DPEVCLKLVL-MYIEEGLV-EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
V ++L +Y + G ++ + + MK+ ++ D ++ + A++
Sbjct: 246 GNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALR 305
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+++++ GC P +VTY ++++ Y + ++ +A ++ +EM+ G +V Y+ ++A Y
Sbjct: 306 LFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYA 365
Query: 446 KTG-----------------------------------RIRDAMWLVAKMKAKGCEPNVW 470
+ G R A+ +M+ C PN+
Sbjct: 366 RAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIV 425
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YN L+D++GR + L + K++K M+ + TPD V++ +++ ++ + E
Sbjct: 426 TYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREM 485
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
+ G + I++ + + ++ V + + + G + + + M +L G
Sbjct: 486 KRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRW 545
Query: 591 MQAQWLQQ 598
Q + + Q
Sbjct: 546 QQCEKVSQ 553
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 116/228 (50%), Gaps = 4/228 (1%)
Query: 377 RRGYWA-AVKVYEQLISQGCIPGQ-VTYASIINAYCRIALYSKAEKVFIEMQQ-KGFDKC 433
R+G W A++V+E + C + V ASI++ A ++F ++Q + +
Sbjct: 153 RQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLD 212
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG-RAKNLRQVEKLW 492
V AY+S++++ + R + + L M+ +G N YN ++D++G R + +++ L+
Sbjct: 213 VYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLF 272
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+EM+ +++PD +Y T+I+A + ++ + E + G +R ++ V+ K
Sbjct: 273 QEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKG 332
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+E +LL +M++ G + Y+ + A AGL +A L+++
Sbjct: 333 GMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSL 380
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%)
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
K G A+K ++++ + D Y L+ + AEE+ E G +
Sbjct: 647 KRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLI 706
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
L+ Y + G ++ V M A+++ + +V +S Y A+ V E +
Sbjct: 707 TYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYM 766
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSK 417
GC P Q+T+ ++++ Y R A S+
Sbjct: 767 TEHGCQPTQITFKALLDGYNRNASPSR 793
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 121/540 (22%), Positives = 226/540 (41%), Gaps = 65/540 (12%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSED 142
+ +HG+ + E A D + + K E P T +LI+ L S++ ++L ++
Sbjct: 291 YTHLIHGLCVARRIDE-AMDLFVKMKD-DECFPTVRTYTVLIKSLCGSERKSEALNLVKE 348
Query: 143 FKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHM 201
+ + P+ HT + L+ S KF+ A LL + G + ++ +N+ + GY K M
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
+ V E M+S + ++ Y ++++ Y K + K + + RK+ +
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVT--- 464
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L D +SG A + M ++G++ D Y S+I S V+ A +LF E
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE 524
Query: 322 EKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESM------------------------ 355
+KG+ +P V + L+ Y + G V++ ++E M
Sbjct: 525 QKGV--NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 356 ---------KNAKLKISDCIS--CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
K K+ + +S +++ K + A ++Q++S G P TY +
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
I YCR AE + +M++ G + YSS++ YG G+ A ++ +M+ G
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 465 CEPNVWIYNSLMDM-----HGRAKN-------------LRQVEKLWKEMERRKVTPDKVS 506
CEP+ + SL+ +G+ K V +L ++M VTP+ S
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS 762
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDM 565
Y +I + K ++ + N G+ + ++ KL + E K++ DM
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 201/494 (40%), Gaps = 74/494 (14%)
Query: 167 KFKIANTLLQVFITDGE----IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSG 222
+F + + + QV++ E + +N + GY KL K+ AG+ D
Sbjct: 195 RFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFF 254
Query: 223 CYCQIMEAYYKIGDSEKVAALFLE--------------------CKSRKLDSTP------ 256
Y ++ Y + D + +F E C +R++D
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
Query: 257 -----FST-HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
F T Y +L SL S R EAL ++M+E GI + Y LI S S +
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
+ A EL + EKG++ + L+ Y + G++E +DVVE M++ KL + +
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 371 VNGFSK--------------RRGYWAAVKVYEQLI--------------------SQGCI 396
+ G+ K R V Y LI +G +
Sbjct: 435 IKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P Q TY S+I++ C+ +A +F ++QKG + VV Y++++ Y K G++ +A +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKN--LRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ KM +K C PN +N+L +HG + L++ L ++M + + P + T +I
Sbjct: 555 LEKMLSKNCLPNSLTFNAL--IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ +FD + + +G D + + + ++ + ++ M+ G D
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 575 RLYHSAMNALRDAG 588
Y S + D G
Sbjct: 673 FTYSSLIKGYGDLG 686
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/412 (19%), Positives = 176/412 (42%), Gaps = 39/412 (9%)
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
GCY ++ + + G +++ +++E K+ ++ Y + + K G EA ++
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYT---YNKMVNGYCKLGNVEEANQY 240
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD------------- 328
+ E G+ D Y SLI + ++ A ++F E KG R+
Sbjct: 241 VSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCV 300
Query: 329 --------------------PEVCLKLVLMYIEEGLVEKT--LDVVESMKNAKLKISDCI 366
P V VL+ G K+ L++V+ M+ +K +
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
+++ + + A ++ Q++ +G +P +TY ++IN YC+ + A V M+
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+ Y+ ++ Y K+ + AM ++ KM + P+V YNSL+D R+ N
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+L M R + PD+ +YT++I + +++ + ++ G + + ++
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+ K +++E +L+ M S+ + +++ ++ L G +A L++
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEE 591
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 113/522 (21%), Positives = 218/522 (41%), Gaps = 75/522 (14%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+L Y + WD I SL ++ K + PD +T + ++ +C++ + A L Q
Sbjct: 115 MLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEA 174
Query: 182 GEIA-LLAFNSAMGGYNK--LHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE 238
G + +N+ + Y K +H S +LV +M++AGI + Y +++ AY + G +
Sbjct: 175 GCCPNRVTYNALLDVYGKGGMHKEASELLV--EMEAAGISPNIVTYNELIAAYARAGLCD 232
Query: 239 KVAAL-------------FLEC--------------------KSRKLDSTPFSTHMYKIL 265
+ AAL F C + RK + TP + Y IL
Sbjct: 233 EAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTP-NIVTYNIL 291
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE--- 322
D G+ + + +K F+ M+EK D + SL+ SF + + +F+E +
Sbjct: 292 IDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGY 351
Query: 323 ---------------------------KGMLR---DPEVCLKLVLM--YIEEGLVEKTLD 350
KG+LR P V LM EG ++
Sbjct: 352 MPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEK 411
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP-GQVTYASIINAY 409
V + M A L++SD +++ ++ ++ K ++L P + + + AY
Sbjct: 412 VSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAY 471
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ + ++A+ ++ G + +++M++M K G I A+ L+ +++ +P+
Sbjct: 472 CKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDG 531
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
YN LM M+GR + E++ EM R P+ ++Y T++ +Y + D + + +
Sbjct: 532 VTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGD 591
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
D +VG +S L +E + +++ M G +
Sbjct: 592 MVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQ 633
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 177/380 (46%), Gaps = 4/380 (1%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS-EKVAALFLE 246
A+ S + ++ + I ++E M+ G ++ Y +++ Y K GDS +++ +LF E
Sbjct: 76 AYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQE 135
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
K L+ +P + Y + + ++ EAL+ F++MKE G + Y +L+ +
Sbjct: 136 MKD--LEISP-DDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGK 192
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
K A EL E E G+ + +L+ Y GL ++ + +S+ + L +
Sbjct: 193 GGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFT 252
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
C +++ F++ Y A++ + ++ C P VTY +I+ Y R+ KVF MQ
Sbjct: 253 YCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQ 312
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+K +V ++S++ +G G + + + +MK G P V +N L++ +GR +
Sbjct: 313 EKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVD 372
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
++K + R + P ++ ++++ R + C K E G + A ++
Sbjct: 373 YSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLI 432
Query: 547 GVFSKLSQIEELVKLLQDMK 566
++ Q +L K + +++
Sbjct: 433 HSYANSGQFFQLRKYIDELE 452
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 165/325 (50%), Gaps = 3/325 (0%)
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSI-YASLICSFASITEVKLAEELFKE-AEEKGM 325
+LG+ G+ +AL+ F +++ + + AS++ + ++ A ELF+ +++
Sbjct: 11 ALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESY 70
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
D L+ + ++ + + E+M+ + + +++ + KR W ++
Sbjct: 71 SLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQ 130
Query: 386 -VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+++++ P TY ++I A + + +A ++F EM++ G V Y++++ +Y
Sbjct: 131 SLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVY 190
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
GK G ++A L+ +M+A G PN+ YN L+ + RA + L K + + + PD+
Sbjct: 191 GKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDE 250
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+Y T+ISA+NRA ++ ++ + E R + I++ ++ ++ ++++++K+ +
Sbjct: 251 FTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKF 310
Query: 565 MKSEGTKLDERLYHSAMNALRDAGL 589
M+ + D ++S + + + G+
Sbjct: 311 MQEKNCTPDLVTWNSLLKSFGNCGM 335
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 139/304 (45%), Gaps = 4/304 (1%)
Query: 269 LGKSGRAFEALKFFRDMKE-KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
LG + AL+ F +K+ + D Y SLI + LF+ + +G R
Sbjct: 48 LGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQ-R 106
Query: 328 DPEVCLKLVL-MYIEEGLV-EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
V ++L +Y + G ++ + + MK+ ++ D ++ + A++
Sbjct: 107 GNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALR 166
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+++++ GC P +VTY ++++ Y + ++ +A ++ +EM+ G +V Y+ ++A Y
Sbjct: 167 LFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYA 226
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+ G +A L + +KG P+ + Y +L+ RA+ + + + EM + TP+ V
Sbjct: 227 RAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIV 286
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y +I Y R + D +K + + D ++ F + E+ + ++M
Sbjct: 287 TYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREM 346
Query: 566 KSEG 569
K G
Sbjct: 347 KRAG 350
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/367 (19%), Positives = 159/367 (43%), Gaps = 2/367 (0%)
Query: 234 IGDSEKVAALFLECKSRKLD-STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+G+ E++ A +S K D S + Y L L ++ R E + F M+ +G
Sbjct: 48 LGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRG 107
Query: 293 DPSIYASLICSFASITEV-KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y ++ + + + LF+E ++ + D ++ I+ ++ L +
Sbjct: 108 NAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRL 167
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+ MK A + A+++ + K + A ++ ++ + G P VTY +I AY R
Sbjct: 168 FQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYAR 227
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
L +A + + KG Y ++++ + + R A+ +M+ C PN+
Sbjct: 228 AGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVT 287
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
YN L+D++GR + L + K++K M+ + TPD V++ +++ ++ + E +
Sbjct: 288 YNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMK 347
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
G + I++ + + ++ V + + + G + + + M +L G
Sbjct: 348 RAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQ 407
Query: 592 QAQWLQQ 598
Q + + Q
Sbjct: 408 QCEKVSQ 414
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 180/410 (43%), Gaps = 21/410 (5%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T LI ++++++ + + + N P+ T + L+ R K + +
Sbjct: 248 PDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKL---DDM 304
Query: 175 LQVFITDGE----IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
++VF E L+ +NS + + M V+ +MK AG + + ++E
Sbjct: 305 MKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIEC 364
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y + G + ++ L T + L SL + GR + K ++M E G+
Sbjct: 365 YGRCGYVDYSVDIYKGLLRTGLQPT---VPTFAALMASLAREGRWQQCEKVSQEMAEAGL 421
Query: 291 LEDPSIYASLICSFASITEV----KLAEELFKEAEE--KGMLRDPEVCLKLVLMYIEEGL 344
+ +A LI S+A+ + K +EL K A++ G+L C VL Y + +
Sbjct: 422 QLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGIL-----CKTFVLAYCKCCM 476
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+ + + + + A+++ +KR AVK+ E++ P VTY
Sbjct: 477 DNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNC 536
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+++ Y R +Y KAE+V EM++ G ++ Y++++ Y K GR+ DA + M A
Sbjct: 537 LMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAAR 596
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
P+ + +N+L+ + ++ + + M P ++++ ++ Y
Sbjct: 597 VRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 646
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 116/228 (50%), Gaps = 4/228 (1%)
Query: 377 RRGYWA-AVKVYEQLISQGCIPGQ-VTYASIINAYCRIALYSKAEKVFIEMQQ-KGFDKC 433
R+G W A++V+E + C + V ASI++ A ++F ++Q + +
Sbjct: 14 RQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLD 73
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG-RAKNLRQVEKLW 492
V AY+S++++ + R + + L M+ +G N YN ++D++G R + +++ L+
Sbjct: 74 VYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLF 133
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+EM+ +++PD +Y T+I+A + ++ + E + G +R ++ V+ K
Sbjct: 134 QEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKG 193
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+E +LL +M++ G + Y+ + A AGL +A L+++
Sbjct: 194 GMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSL 241
>gi|413934890|gb|AFW69441.1| hypothetical protein ZEAMMB73_914225 [Zea mays]
Length = 504
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 177/392 (45%), Gaps = 4/392 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP S LIR L ++ + +L + + P+A + L+ + A ++A+
Sbjct: 85 RPSGSAYARLIRALSRAGRALEAEALLLEMRRLGPRPEAAHYNALLEGLLAAAHLRLADL 144
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
LL DG + +G Y + + V +M+ GI LD+ Y ++ Y
Sbjct: 145 LLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRWGIRLDTAGYSMLVRLYR 204
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
G +K L +E + ++ +Y L D+ GK G+ +A + F M+ +G+
Sbjct: 205 DNGMWKKATDLVMEMQEVGVE---LDVKIYSGLIDTFGKYGQLADARRMFDKMRAEGVRP 261
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
D S + +LI + +K A F +E+GM DP++ + ++ E+G ++ +
Sbjct: 262 DISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLF 321
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ M N K S + +V+ + + + A L ++ + I NAY +
Sbjct: 322 DGMNNRGFKESGAVYAILVDIYGQYGHFRDAQDCIAALRAENTQLLPRVFCVIANAYAQQ 381
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
L + V M+++GF+ +V +S++ +G GR +A+ + +K G P+V Y
Sbjct: 382 GLCEQTVNVLQLMEEEGFEPNLVMLNSLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTY 441
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+LM RAK +V ++++EMER PD+
Sbjct: 442 TTLMKTFMRAKKFEKVSEVYREMERAGCAPDR 473
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 134/325 (41%), Gaps = 70/325 (21%)
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M + G+ + Y L+ ++A ++ + + E G+ D LV +Y + G+
Sbjct: 149 MADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRWGIRLDTAGYSMLVRLYRDNGM 208
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+K D+V M+ +++ I +++ F K A ++++++ ++G P T+ +
Sbjct: 209 WKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDKMRAEGVRPDISTWNA 268
Query: 405 IINAYCRIALYSKAEKVFIEMQQ-----------------------------------KG 429
+I +CR+ +A + F MQ+ +G
Sbjct: 269 LIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMNNRG 328
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK-------------------------- 463
F + Y+ +V +YG+ G RDA +A ++A+
Sbjct: 329 FKESGAVYAILVDIYGQYGHFRDAQDCIAALRAENTQLLPRVFCVIANAYAQQGLCEQTV 388
Query: 464 ---------GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
G EPN+ + NSL++ G A + +++ ++ ++PD V+YTT++ +
Sbjct: 389 NVLQLMEEEGFEPNLVMLNSLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTF 448
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDR 539
RA++F+ + Y E G DR
Sbjct: 449 MRAKKFEKVSEVYREMERAGCAPDR 473
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 93/188 (49%)
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y+ ++ Y ++ KA + +EMQ+ G + V YS ++ +GK G++ DA + KM+
Sbjct: 196 YSMLVRLYRDNGMWKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDKMR 255
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
A+G P++ +N+L+ H R N+++ + + M+ + PD + +IS ++D
Sbjct: 256 AEGVRPDISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWD 315
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
K ++ G A+ I+V ++ + + + +++E T+L R++
Sbjct: 316 EIKKLFDGMNNRGFKESGAVYAILVDIYGQYGHFRDAQDCIAALRAENTQLLPRVFCVIA 375
Query: 582 NALRDAGL 589
NA GL
Sbjct: 376 NAYAQQGL 383
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 70/183 (38%), Gaps = 35/183 (19%)
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW---------------------------- 455
+M G + Y+ ++ Y + GR+ D+ W
Sbjct: 148 QMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRWGIRLDTAGYSMLVRLYRDNG 207
Query: 456 -------LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
LV +M+ G E +V IY+ L+D G+ L +++ +M V PD ++
Sbjct: 208 MWKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDKMRAEGVRPDISTWN 267
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I + R ++F+ + G D I +++ + + +E+ KL M +
Sbjct: 268 ALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMNNR 327
Query: 569 GTK 571
G K
Sbjct: 328 GFK 330
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%)
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+++ + +MQ G AY+ ++ + GR +A L+ +M+ G P YN+L
Sbjct: 70 ARSLGLLADMQASGGRPSGSAYARLIRALSRAGRALEAEALLLEMRRLGPRPEAAHYNAL 129
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
++ A +LR + L +M V ++ +YT ++ AY RA + E R G
Sbjct: 130 LEGLLAAAHLRLADLLLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRWGI 189
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+D A ++V ++ ++ L+ +M+ G +LD ++Y ++
Sbjct: 190 RLDTAGYSMLVRLYRDNGMWKKATDLVMEMQEVGVELDVKIYSGLIDTF 238
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 161/361 (44%), Gaps = 23/361 (6%)
Query: 169 KIANTLLQVFITDGEIA-----------------LLAFNSAMGGYNKLHMYYSTILVYEK 211
K+ N L++ + GE+A +++FN+ + G + ++ +
Sbjct: 241 KLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRR 300
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
M AG+ D Y +++ ++G E +F + R + ++ IL D+ K
Sbjct: 301 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAV---VFTILIDAHCK 357
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
G A L+ R+M+E+G+ D Y +++ ++K A + E G+ D
Sbjct: 358 KGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 417
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L+ Y +E ++ +++ ++M + + + A+++G SK A +V +++
Sbjct: 418 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 477
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
G P TY +I+A+CR ++ EMQ KG VV Y+ ++ + K G+++
Sbjct: 478 EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMK 537
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+A L+ M G P+ YN L+D H + + +E+L + PD YT+++
Sbjct: 538 NADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSA---KGTVPDLGVYTSIV 594
Query: 512 S 512
Sbjct: 595 G 595
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 104/213 (48%)
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+A V++++ S+G V++ ++I+ CR AE + M + G V Y +++
Sbjct: 258 SAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALI 317
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ GRI DA + KM +G +PN ++ L+D H + + + +L +EM R V
Sbjct: 318 QGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVR 377
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD V+Y +++ RAR+ E R G D ++ + K +++ +++
Sbjct: 378 PDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEI 437
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
Q+M +EG LDE Y + ++ L AG A+
Sbjct: 438 KQNMVAEGVGLDEVTYTALISGLSKAGRSADAE 470
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 141/331 (42%), Gaps = 6/331 (1%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P ++ +L L + G A F +M+ +G+ + ++I ++ AE
Sbjct: 237 PPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAET 296
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L + E G+ D L+ G +E V E M +K + + +++
Sbjct: 297 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 356
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K+ ++++ ++ +G P VTY +I+N CR A + +EM+ G V
Sbjct: 357 KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 416
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y++++ Y K + AM + M A+G + Y +L+ +A E++ EM
Sbjct: 417 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 476
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG---GVIDRAIAGIMVGVFSKL 552
+ PD +YT VI A+ R + ++ E + G GV+ + IM G F KL
Sbjct: 477 MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNV--IMNG-FCKL 533
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
Q++ LL M + G D+ Y+ ++
Sbjct: 534 GQMKNADMLLNAMINIGVSPDDITYNILLDG 564
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 146/341 (42%), Gaps = 38/341 (11%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
Y ++ AG+ ++ + +M ++G+ +F E +SR + T S + +
Sbjct: 228 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVS---FNTMISG 284
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
+ ++G A R M E G+ D Y +LI + ++ A +F++ +GM +
Sbjct: 285 MCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPN 344
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
V L+ + ++G E L++ M+ ++ AIVNG + R +A +
Sbjct: 345 AVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVV 404
Query: 389 QLISQGCIPGQVTYASIINAYCR--------------------------IALYS------ 416
++ S G P VTY ++I+ YC+ AL S
Sbjct: 405 EMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAG 464
Query: 417 ---KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
AE+V EM + G + Y+ ++ + + G ++ + L+ +M+ KG +P V YN
Sbjct: 465 RSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYN 524
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+M+ + ++ + L M V+PD ++Y ++ +
Sbjct: 525 VIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGH 565
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 132/298 (44%), Gaps = 7/298 (2%)
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLV 345
+GI +P+ L+ F + E A + + + G+ PE L VLM + G +
Sbjct: 202 RGIRLEPTSCTGLMSRFPTAPE---ACAFYLQLLDAGL--PPEAKLFNVLMRDLVRLGEL 256
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+V + M++ ++ + +++G + A ++ ++ G P TY ++
Sbjct: 257 ASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGAL 316
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
I CR+ A VF +M +G V ++ ++ + K G + L +M+ +G
Sbjct: 317 IQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGV 376
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
P+ YN++++ RA++L+ + EM + PD V+YTT+I Y + E DM ++
Sbjct: 377 RPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAME 436
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
G +D ++ SK + + ++L +M G + D Y ++A
Sbjct: 437 IKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDA 494
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 142/322 (44%)
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
A EA F+ + + G+ + ++ L+ + E+ A+ +F E + +G+ R
Sbjct: 221 APEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNT 280
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
++ G ++ + M A + A++ G + A V+E++ +G
Sbjct: 281 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG 340
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
P V + +I+A+C+ ++ EM+++G V Y+++V + ++ A
Sbjct: 341 MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSAS 400
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+V +M++ G P+ Y +L+D + + + L ++ + M V D+V+YT +IS
Sbjct: 401 GIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 460
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
++A + E G D +++ F + ++ ++LL++M+++G K
Sbjct: 461 SKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGV 520
Query: 575 RLYHSAMNALRDAGLQMQAQWL 596
Y+ MN G A L
Sbjct: 521 VTYNVIMNGFCKLGQMKNADML 542
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 136/344 (39%), Gaps = 48/344 (13%)
Query: 67 LNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRY 126
L+R PD + + + G+ + + ++ + + +P +LI
Sbjct: 297 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGR--GMKPNAVVFTILIDA 354
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL 186
+ ++++ L + + V PDA T + +V RAR K A
Sbjct: 355 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSA--------------- 399
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
S I+V +M+SAG+ D+ Y +++ Y K E+ + +E
Sbjct: 400 -----------------SGIVV--EMRSAGLRPDTVTYTTLIDGYCK----EEELDMAME 436
Query: 247 CKSRKL-DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
K + + Y L L K+GR+ +A + +M E G+ D + Y +I +F
Sbjct: 437 IKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFC 496
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKIS 363
+VK L KE + KG R P V V+M + + G ++ ++ +M N +
Sbjct: 497 RKGDVKTGLRLLKEMQNKG--RKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPD 554
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
D +++G K + + E ++G +P Y SI+
Sbjct: 555 DITYNILLDGHCK---HGKVTDIEELKSAKGTVPDLGVYTSIVG 595
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 169/392 (43%), Gaps = 14/392 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+L +N + GY + + M I D + ++ A+ K G L+
Sbjct: 115 VLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYR 174
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---C 302
E R + T + Y + D K R +A F M KG D +LI C
Sbjct: 175 EMLRRNIFPTTIT---YSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCC 231
Query: 303 --------SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
F + V +A++LF+E G+ D C L+ E G +EK L++ +
Sbjct: 232 RAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKV 291
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
+ +K+ + I+NG K A ++ L G VTY +I + +
Sbjct: 292 FQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGN 351
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+ +AE +++EM KG V Y+SMV + K R+ +A +V M ++GC P+V +++
Sbjct: 352 FLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFST 411
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L+ + +A + +L+ EM +R + D ++Y +I + + + + + E +G
Sbjct: 412 LIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSG 471
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
D M+ +++++ + +L+D++
Sbjct: 472 VCPDTITFRSMLAGLCTKAELQKGLTMLEDLQ 503
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 189/435 (43%), Gaps = 27/435 (6%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ F + M G + + + ++M G D+ Y I+ K+GD+ V+AL +
Sbjct: 10 VVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDT--VSALNM 67
Query: 246 ECKSRKLDSTPFSTH--MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
RK+D + + +Y + D L K G +A F +M EKGI + Y +I
Sbjct: 68 ---LRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDG 124
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ S + AE+L ++ E+ + DP+V L+ +++EG V ++ M +
Sbjct: 125 YCSYGKWSDAEQLLRDMIERNI--DPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIF 182
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN-----------AYC 410
+ ++++GF K A +++ ++S+GC P +T ++I+ +C
Sbjct: 183 PTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFC 242
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
++ + A+ +F EM G +V ++++A + G++ A+ + + + +
Sbjct: 243 QVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTA 302
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
N +++ + + + L+ + V D V+Y +I + + F Y E
Sbjct: 303 TCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEM 362
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL-----R 585
G + MV F K +++EE +++ M SEG D + + +
Sbjct: 363 LCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRV 422
Query: 586 DAGLQMQAQWLQQNF 600
D GL++ ++ Q+
Sbjct: 423 DDGLELFSEMCQRGL 437
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 157/350 (44%), Gaps = 11/350 (3%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P + + L + L + GR +AL M E+G D Y +++ + + A
Sbjct: 7 PANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALN 66
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ ++ +E + + + +V ++G K ++ M + + +++G+
Sbjct: 67 MLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYC 126
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ A ++ +I + P VT++++INA+ + S AE+++ EM ++ +
Sbjct: 127 SYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTI 186
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK-----------N 484
YSSM+ + K R+ DA + M +KGC P++ N+L+D RAK N
Sbjct: 187 TYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGN 246
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+ + L++EM V+PD V+ T+++ + + ++ + F+ + +D A I
Sbjct: 247 VNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNI 306
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
++ K ++++E L + G + D Y+ + G ++A+
Sbjct: 307 IINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAE 356
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 172/406 (42%), Gaps = 40/406 (9%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +I KW L D N+ PD T S L+ + V+ K A L
Sbjct: 113 PNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEEL 172
Query: 175 LQ------VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
+ +F T + ++S + G+ K +++ M S GC I+
Sbjct: 173 YREMLRRNIFPT-----TITYSSMIDGFCKHSRLEDAKHMFDLMVS------KGCSPDII 221
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
I C++++ H+ C + G A F++M
Sbjct: 222 TLNTLIDGC---------CRAKR--------HLIHGFC----QVGNVNVAQDLFQEMISN 260
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G+ D +L+ +++ A E+FK ++ M D C ++ + V++
Sbjct: 261 GVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEA 320
Query: 349 LDVVESMKNAKLKISDCISCAIVNG-FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
D+ S+ ++ +D ++ I+ G F K + A +Y +++ +G IP VTY S+++
Sbjct: 321 WDLFNSLPVNGVE-TDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVD 379
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+C+ +A ++ M +G VV +S+++ Y K GR+ D + L ++M +G
Sbjct: 380 GFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVA 439
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ YN+L+ + +L + +++EM V PD +++ ++++
Sbjct: 440 DTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAG 485
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 150/378 (39%), Gaps = 25/378 (6%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
+L RD + PD F + ++ +K+ + A + Y E + F P T +I
Sbjct: 136 QLLRDMIERNIDPDVVTFSALINAFVKEGKVSG-AEELYREMLRRNIF-PTTITYSSMID 193
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARK-----------FKIANTL 174
+ + + + + PD T + L+ C RA++ +A L
Sbjct: 194 GFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDL 253
Query: 175 LQVFITDG-EIALLAFNSAMGGY---NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
Q I++G ++ N+ + G KL V++K K + LD+ I+
Sbjct: 254 FQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSK---MDLDTATCNIIING 310
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K ++ LF S ++ Y IL K G A + +M KGI
Sbjct: 311 MCKGNKVDEAWDLF---NSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGI 367
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
+ Y S++ F ++ A ++ +G D L+ Y + G V+ L+
Sbjct: 368 IPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLE 427
Query: 351 VVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+ M L ++D I+ A+++GF K A ++E+++S G P +T+ S++
Sbjct: 428 LFSEMCQRGL-VADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGL 486
Query: 410 CRIALYSKAEKVFIEMQQ 427
C A K + ++Q+
Sbjct: 487 CTKAELQKGLTMLEDLQK 504
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 185/403 (45%), Gaps = 3/403 (0%)
Query: 182 GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
G ++ LA + + G K + + M G+ L++ CY +++ Y + D +V
Sbjct: 173 GSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQ 232
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
+ ++ +++T Y IL DSL + + F +MK ++ D +Y ++I
Sbjct: 233 EILEIMENEGIEAT---VGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVI 289
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
++ ++ A ++ E G+ + L+ + + G +E ++ M+ +
Sbjct: 290 NAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVG 349
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
++ I +++G+ ++ A+K+ + G TY ++ CR+ +A+ +
Sbjct: 350 LNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTL 409
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
M + G V Y+++++++ K G + +A L +M KG P+V YN ++D + +
Sbjct: 410 LHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTK 469
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
++R+ E+ KEME++ PD +Y +++ + + D+ +K + E + G +
Sbjct: 470 KGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVA 529
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ +K + E +L DM G D+ LY + + +L
Sbjct: 530 YTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 572
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 164/390 (42%), Gaps = 50/390 (12%)
Query: 241 AALFLECKSRKLDSTPFSTH--MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
AA LE R L S P S ++ D L KSGR +A + DM G+ + Y
Sbjct: 160 AAGLLE---RALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYN 216
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
SL+ + + +E+ + E +G+ E + + ++ + + VE++ N
Sbjct: 217 SLLDCYVRQKDDGRVQEILEIMENEGI----EATVGTYTILVDSLSTARDISKVEALFN- 271
Query: 359 KLKISDCIS-----CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
++K ++ + A++N + + A KV ++ + G P + TY +IN +C+I
Sbjct: 272 EMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIG 331
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE------- 466
AE + +MQ +G + +++M+ Y + G + DA+ + A M+ G E
Sbjct: 332 QMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYN 391
Query: 467 ----------------------------PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
PN Y +L+ +H + ++ + +L++EM +
Sbjct: 392 TLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEK 451
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
TP V+Y +I Y + +F E G V D +V +++
Sbjct: 452 GATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVA 511
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+KL ++MK GT+ + Y + ++ L G
Sbjct: 512 LKLFEEMKQRGTEPNVVAYTALISGLAKEG 541
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 149/352 (42%), Gaps = 38/352 (10%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ E M++ GI G Y ++++ D KV ALF E K+ + ++Y + +
Sbjct: 234 ILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVG---DVYLYTAVIN 290
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ ++G A K + G+ + Y LI F I +++ AE L + + +G+
Sbjct: 291 AYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGL 350
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ + ++ Y +G+V+ L + +M+ +++ + G + A +
Sbjct: 351 NQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLL 410
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+I G +P VTY ++I+ +C+ +A ++F EM +KG VV Y+ M+ Y K
Sbjct: 411 HIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKK 470
Query: 448 GRIRDA-----------------------------------MWLVAKMKAKGCEPNVWIY 472
G IR+A + L +MK +G EPNV Y
Sbjct: 471 GSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAY 530
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+L+ + +L+ +M + + PD Y+ ++ + + D+ V
Sbjct: 531 TALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKDVKV 582
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 14/219 (6%)
Query: 394 GCIPGQVT---YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT--- 447
G PG V+ + +++ C+ A ++ +M + G + Y+S++ Y +
Sbjct: 169 GSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDD 228
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR+++ + + M+ +G E V Y L+D A+++ +VE L+ EM+ V D Y
Sbjct: 229 GRVQEILEI---MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLY 285
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T VI+AY RA K +E NG + G+++ F K+ Q+E LL DM+
Sbjct: 286 TAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQG 345
Query: 568 EGTKLDERLYHSAMN-----ALRDAGLQMQAQWLQQNFE 601
+G L++ ++++ ++ + D L+++A + E
Sbjct: 346 QGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVE 384
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 192/436 (44%), Gaps = 36/436 (8%)
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE 183
+R LV++ + + E +PD C+ L+ R K K A ++++ G
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 184 IA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVL----------DSGCYCQIMEAY- 231
+ ++ +N + GY K + + V ++M A V+ DSG Q ME
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183
Query: 232 -------------YKI------GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKS 272
Y I +S A+ L + R S P Y +L + + K
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKP-DVVTYNVLINGICKE 242
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
GR EA+KF +M G + + ++ S S AE+L + KG P V
Sbjct: 243 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC--SPSVV 300
Query: 333 LKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
+L+ +GL+ + +D++E M + +++GF K + A++ + +
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+S+GC P VTY +++ A C+ A ++ ++ KG ++ Y++++ K G+
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 420
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
A+ L+ +M+ KG +P++ Y+SL+ R + + K + ++E + P+ ++Y ++
Sbjct: 421 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 480
Query: 511 ISAYNRAREFDMCVKF 526
+ ++R+ D + F
Sbjct: 481 MLGLCKSRQTDRAIDF 496
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 148/341 (43%), Gaps = 3/341 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L KSG AL+ M + D Y +++ + ++K A E+
Sbjct: 130 YNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQL 186
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+K D L+ +E V + + +++ M+N K ++NG K
Sbjct: 187 QKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD 246
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+K + S GC P +T+ I+ + C + AEK+ +M +KG VV ++ ++
Sbjct: 247 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 306
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ G + A+ ++ KM GC PN YN L+ + K + + + M R
Sbjct: 307 NFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY 366
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD V+Y T+++A + + D+ V+ N+ G ++ SK+ + E +KL
Sbjct: 367 PDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKL 426
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
L +M+ +G K D Y S ++ L G +A + EG
Sbjct: 427 LDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 467
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 188/425 (44%), Gaps = 11/425 (2%)
Query: 163 VRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
VR + + L+ + G+I ++ S + G+ ++ V E ++ +G V D
Sbjct: 68 VRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 127
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y ++ Y K G+ + A L+ + D ++T + + LCDS G+ +A++
Sbjct: 128 ITYNVLISGYCKSGEIDN-ALQVLDRMNVAPDVVTYNT-ILRTLCDS----GKLKQAMEV 181
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--Y 339
+K D Y LI + + V A +L E KG P+V VL+
Sbjct: 182 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKG--SKPDVVTYNVLINGI 239
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+EG +++ + + +M + + + I+ + A K+ ++ +GC P
Sbjct: 240 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 299
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
VT+ +IN CR L +A + +M G ++Y+ ++ + K ++ A+ +
Sbjct: 300 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 359
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M ++GC P++ YN+L+ + + ++ ++ + +P ++Y TVI ++ +
Sbjct: 360 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 419
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ +K +E R G D +V S+ +++E +K D++ G + + Y+S
Sbjct: 420 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNS 479
Query: 580 AMNAL 584
M L
Sbjct: 480 IMLGL 484
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 158/408 (38%), Gaps = 19/408 (4%)
Query: 76 AVPDAKKFDSFLHGMLKDPQTQEL--AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
AVPD ++ + G K + D N A P+ T ++R L S K
Sbjct: 123 AVPDVITYNVLISGYCKSGEIDNALQVLDRMNVA-------PDVVTYNTILRTLCDSGKL 175
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
+ + + PD T + L+ + + A LL G + ++ +N
Sbjct: 176 KQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVL 235
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG---DSEKVAALFLECKS 249
+ G K I M S G + + I+ + G D+EK+ + L
Sbjct: 236 INGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML---- 291
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
RK S T + IL + L + G A+ M G + Y L+ F +
Sbjct: 292 RKGCSPSVVT--FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 349
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
+ A E +G D L+ ++G V+ ++++ + +
Sbjct: 350 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 409
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++G SK A+K+ +++ +G P +TY+S+++ R +A K F +++ G
Sbjct: 410 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 469
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
+ Y+S++ K+ + A+ +A M +K C+P Y L++
Sbjct: 470 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIE 517
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 139/359 (38%), Gaps = 12/359 (3%)
Query: 78 PDAKKFDSFLHGMLKDP---QTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
PD + + K+ Q +L + N+ K P+ T +LI + + + D
Sbjct: 192 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSK-----PDVVTYNVLINGICKEGRLD 246
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAM 193
+ + Y P+ T + ++ S ++ A LL + G +++ FN +
Sbjct: 247 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 306
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
+ + I + EKM G +S Y ++ + K ++ A +L+ +
Sbjct: 307 NFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDR-AIEYLDIMVSRGC 365
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
T Y L +L K G+ A++ + KG Y ++I + + + + A
Sbjct: 366 YPDIVT--YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 423
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+L E KG+ D LV EG V++ + ++ ++ + +I+ G
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 483
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
K R A+ +IS+ C P + TY +I L +A + E+ +G K
Sbjct: 484 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVK 542
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/523 (20%), Positives = 224/523 (42%), Gaps = 21/523 (4%)
Query: 97 QELAYDYYNEAKKLPEF-----RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPD 151
+ L D+ +A+K+ + +P++ LL+ Y + S + E + + P+
Sbjct: 167 RNLVEDHPKDARKVVDAFKRIKKPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPN 226
Query: 152 AHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA-FNSAMGGYNKLHMYYSTILVYE 210
H+ + L+ + A+ + A ++ +G A ++ + GY +L + ++
Sbjct: 227 VHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQ 286
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
+ S + Y I+ AY K G+ E+ A+ + + L++T +Y +L D
Sbjct: 287 RALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEAT---LGLYNMLMDGYV 343
Query: 271 KSGRAFEALKFFRDMK---EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ L FR +K E G+ Y LI ++ + ++ A ++ E E++G+
Sbjct: 344 HCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKH 403
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ + ++ Y++ G V E M NA +K ++N F K A+++
Sbjct: 404 NRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELL 463
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
++ S C P TY II+ + +I A + +M+ GF Y+ ++ +
Sbjct: 464 ARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQA 523
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A ++ +M G PN Y +L++ + ++ K + ++ + PD ++Y
Sbjct: 524 GQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAY 583
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+++ A +A + E G ++ I I++ +++ + E ++Q M+
Sbjct: 584 ASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRH 643
Query: 568 EGTKLDERLYHSAMNALRDAG---------LQMQAQWLQQNFE 601
EG D Y S +NA AG QM+ Q +Q N +
Sbjct: 644 EGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQ 686
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 196/454 (43%), Gaps = 18/454 (3%)
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+LSE++ +V+ + ++ + +A + A ++ G E L +N M GY
Sbjct: 288 ALSENWHHNDVI-----YNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGY 342
Query: 197 NKLHMYYSTILVYEKMKS------AGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ V+ ++K+ + V+ GC ++ Y K+G +K + E + +
Sbjct: 343 VHCRAVDKCLNVFRRLKARTETGLSPTVVSYGC---LINLYSKLGKMDKALQISNEMEDQ 399
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ + Y ++ D + G A F DM GI D Y L+ +F ++
Sbjct: 400 GIK---HNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQM 456
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A EL E ++ +++ G + + V MK A + S I
Sbjct: 457 NRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVI 516
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++G ++ A + ++++ G P + +Y ++I Y I A K F +++ G
Sbjct: 517 MHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGL 576
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
V+AY+S++ K GR++ + + A+M A G N +IYN L+D + ++ +
Sbjct: 577 KPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASD 636
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
+ ++M +TPD SYT+ I+A +A + + + + G + ++ ++
Sbjct: 637 IMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWA 696
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
S E+ + +MKS G D+ LYH M +L
Sbjct: 697 SASYPEKALICYDEMKSAGMIPDKPLYHCIMTSL 730
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 158/367 (43%), Gaps = 12/367 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVR----ARKFKI 170
P + LI + K D + +S + + + + T S ++ V+ A F +
Sbjct: 368 PTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSV 427
Query: 171 ANTLLQVFI-TDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
+ I DG + +N M + K + + +M+S Y I++
Sbjct: 428 FEDMSNAGIKPDG----ITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIID 483
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
+ KIGD + F + K+ S Y ++ L ++G+ A +M G
Sbjct: 484 GFMKIGD---LRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAG 540
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
+ + Y +LI +A I ++ LA + F +E G+ D L+ + G ++ TL
Sbjct: 541 VHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTL 600
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+ M A + +++ I +++G+++R W A + +++ +G P +Y S INA
Sbjct: 601 AITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINAC 660
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ KA + +M+Q+G + AY++++ + A+ +MK+ G P+
Sbjct: 661 CKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDK 720
Query: 470 WIYNSLM 476
+Y+ +M
Sbjct: 721 PLYHCIM 727
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 183/426 (42%), Gaps = 41/426 (9%)
Query: 104 YNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDF--KIYNVLPDAHTCSRLVAS 161
Y E K P+ TL ++I LV+ ++ + L K PD T + ++ S
Sbjct: 282 YFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHS 341
Query: 162 CVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD 220
K + + + + +G + ++++N+ +G Y M+ + +++ +K G+ D
Sbjct: 342 YYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPD 401
Query: 221 SGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALK 280
Y ++ AY + G EK F E + S Y L D+ G +G EA+
Sbjct: 402 VVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVS---YNALIDAYGSAGMFKEAIS 458
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
+M++ GI D ++L+ + ++ + + + A+ +G +KL ++
Sbjct: 459 LLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRG--------IKLNIVCY 510
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
G+ + L D Y A+++Y +++ P V
Sbjct: 511 NSGI------------GSYLNFGD---------------YGKALELYAVMMASNVNPDAV 543
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TY +I+ C++ Y+++ K F +M YSS++ Y K G++ +A + M
Sbjct: 544 TYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSM 603
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
K GC P+V Y ++++ + + R L+KEME V PD + ++++ A NR +
Sbjct: 604 KESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQH 663
Query: 521 DMCVKF 526
+ ++
Sbjct: 664 ERVLQL 669
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 146/331 (44%), Gaps = 4/331 (1%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y L + ++G+ A+ DM I + Y ++I + + K A EL K+
Sbjct: 192 IYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKM 251
Query: 321 EEKGMLRDPEVCLKLVLMYIEEG-LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
G+ D V +VL + G K + E MK A + +++ K
Sbjct: 252 TRNGVGPDL-VTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQ 310
Query: 380 YWAAVKVYEQLISQ--GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
Y A+++ + + C P VTY SI+++Y + VF M +G +V+Y
Sbjct: 311 YGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSY 370
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++++ Y G DA+ + +K G P+V Y +L++ +GR+ + + +KEM +
Sbjct: 371 NALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRK 430
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
P+ VSY +I AY A F + +E +G D ++ + QI +
Sbjct: 431 NSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITK 490
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ +L+ KS G KL+ Y+S + + + G
Sbjct: 491 IDTILEAAKSRGIKLNIVCYNSGIGSYLNFG 521
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 166/393 (42%), Gaps = 5/393 (1%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+NS + + + + I + + M A I Y ++ A G+ +K L CK
Sbjct: 193 YNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALEL---CK 249
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ + I+ + + +A+ +F MK I D +I
Sbjct: 250 KMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDG 309
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCI 366
+ A EL EK P+V +M Y G VE V + M +K +
Sbjct: 310 QYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVS 369
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
A++ ++ R + A+ +++ L G P V+Y +++NAY R KA + F EM+
Sbjct: 370 YNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMR 429
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+ +V+Y++++ YG G ++A+ L+ +M+ G P+V ++L+ GR + +
Sbjct: 430 KNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQIT 489
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+++ + + + R + + V Y + I +Y ++ ++ Y + D I++
Sbjct: 490 KIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILI 549
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
K+ + E +K +DM L + +Y S
Sbjct: 550 SGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSS 582
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 174/445 (39%), Gaps = 41/445 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + L+ + Q ++ A + + E +K RP + LI + + +
Sbjct: 400 PDVVSYTTLLNAYGRSGQPEK-AREAFKEMRK-NSCRPNIVSYNALIDAYGSAGMFKEAI 457
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
SL + + + PD + S L+ +C R R+ +T+L
Sbjct: 458 SLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTIL---------------------- 495
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
E KS GI L+ CY + +Y GD K L+ + ++
Sbjct: 496 ------------EAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAV 543
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ Y IL L K G+ E+LKFF DM + I +Y+SLICS+ ++ AE F
Sbjct: 544 T---YNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTF 600
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+E G L D ++ Y ++G D+ + M+ ++ I +++ ++
Sbjct: 601 SSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRG 660
Query: 378 RGYWAAVKVYEQLISQGCIP-GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ +++ E L+ + CIP Q Y II + + + A ++ + V
Sbjct: 661 SQHERVLQLME-LMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGT 719
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
+ ++ GK G+ M L KM + V Y L+ R+ ++ + ME
Sbjct: 720 LNHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIEVLQWME 779
Query: 497 RRKVTPDKVSYTTVISAYNRAREFD 521
V+P Y V+ R D
Sbjct: 780 DAGVSPTLYMYQNVLPYIWRDNSMD 804
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 96/500 (19%), Positives = 192/500 (38%), Gaps = 37/500 (7%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P+ LI ++ +W +++ +D + P T + ++ +C A +K A
Sbjct: 187 KPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALE 246
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L + +G L+ N + + Y I +E MK A I D+ ++
Sbjct: 247 LCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLV 306
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K G + L + ++ P Y + S G+ + F M +G+
Sbjct: 307 KDGQYGEAIELLNSMREKRTQCPP-DVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKP 365
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ Y +L+ ++AS A +FK ++ G+ D L+ Y G EK +
Sbjct: 366 NIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAF 425
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ M+ + + A+++ + + A+ + ++ G P V+ ++++ A R
Sbjct: 426 KEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRC 485
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+K + + + +G +V Y+S + Y G A+ L A M A P+ Y
Sbjct: 486 RQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTY 545
Query: 473 NSLM-----------------DM------------------HGRAKNLRQVEKLWKEMER 497
N L+ DM + + L + E + M+
Sbjct: 546 NILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKE 605
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
PD ++YT +I AYN + + E N D I ++ ++ SQ E
Sbjct: 606 SGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHER 665
Query: 558 LVKLLQDMKSEGTKLDERLY 577
+++L++ MK + L+++ Y
Sbjct: 666 VLQLMELMKEKCIPLNQKAY 685
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 147/355 (41%), Gaps = 38/355 (10%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMK-EKGILEDPSIYASLICSFASITEVKLAEE 315
F+ + +L + +G A+ FR MK ++ IY +I A +++ A
Sbjct: 117 FARRNFPLLIREITFAGSLQHAVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARG 176
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
LF E +E D ++ L+ + G +++++ M A + S ++N
Sbjct: 177 LFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACG 236
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF----- 430
+ A+++ +++ G P VT+ +++A+ + YSKA F M+
Sbjct: 237 AAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTF 296
Query: 431 -----------------------------DKC---VVAYSSMVAMYGKTGRIRDAMWLVA 458
+C VV Y+S++ Y G++ D +
Sbjct: 297 TLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFD 356
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
M A+G +PN+ YN+L+ + ++K +++ + PD VSYTT+++AY R+
Sbjct: 357 MMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSG 416
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ + + + E R N + ++ + +E + LL +M+ +G D
Sbjct: 417 QPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPD 471
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/566 (19%), Positives = 241/566 (42%), Gaps = 47/566 (8%)
Query: 73 HQTAVPDAK-KFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKL--LIRYLVQ 129
H + + +AK + L + D + E A D + + + + RP S + L + +
Sbjct: 26 HYSCISEAKVSYKERLRNGIVDIKVNE-AIDLF---ESMIQSRPLPSLIDFSKLFSAVAR 81
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA------------------ 171
K++D ++ ++ + + + +T + ++ R RK A
Sbjct: 82 RKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTIT 141
Query: 172 -NTLLQVFITDGEIA-----------------LLAFNSAMGGYNKLHMYYSTILVYEKMK 213
+TL+ F +G ++ ++ N+ + G +++ ++M
Sbjct: 142 FSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV 201
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
G + Y ++ K G++ LF + + R + + S Y I+ DSL K G
Sbjct: 202 KYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKA---SVVQYSIVIDSLCKDG 258
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
+AL F +M+ KGI D Y+S+I + ++ +E + ++ +
Sbjct: 259 NLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFS 318
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ 393
L+ ++++EG + + ++ M + ++++GF K A ++ + ++S+
Sbjct: 319 ALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSK 378
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
GC P VTY+ +IN+YC+ ++F E+ KG V Y+++V + ++G++ A
Sbjct: 379 GCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVA 438
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
L +M ++G P+V Y L+D L++ +++++M++ ++ Y +I
Sbjct: 439 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHG 498
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
A + D + + G D +M+G K + E L + MK +G
Sbjct: 499 MCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPS 558
Query: 574 ERLYHSAMNA-LRDAGLQMQAQWLQQ 598
+ Y+ + A L +G+ + +++
Sbjct: 559 DCTYNILIRAHLGGSGVISSVELIEE 584
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 120/292 (41%), Gaps = 23/292 (7%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEF------RPEKST 119
EL + + PD + S + G K+ + EA ++ + P T
Sbjct: 335 ELYNEMVARGIAPDTITYSSLIDGFCKENR--------LGEANQMLDLMVSKGCEPNIVT 386
Query: 120 LKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
+LI ++K+ D+ + L + ++ D T + LV ++ K +A L Q +
Sbjct: 387 YSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMV 446
Query: 180 TDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE 238
+ G +++ + + G + ++EKM+ + ++L G Y I+ +
Sbjct: 447 SRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVD 506
Query: 239 KVAALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+LF L K K D Y ++ L K G EA FR MKE G
Sbjct: 507 DAWSLFCSLSVKGVKPD-----VLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCT 561
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
Y LI + + V + EL +E + +G D +K+V++ + +G ++KT
Sbjct: 562 YNILIRAHLGGSGVISSVELIEEMKMRGFAADAST-IKMVVVMLSDGRLDKT 612
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 188/439 (42%), Gaps = 6/439 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
++P+ T LI L K V+L + PD T +V + +A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 173 TLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+LL+ + G+I ++ +N+ + G K + ++ +M + GI D Y ++
Sbjct: 244 SLLKK-MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
G + L + RK++ + + L D+ K G+ EA K + +M ++ I
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVT---FSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
D Y+SLI F + A+ +F+ K + L+ + + VE+ ++
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ M L + +++GF + R A V++Q++S G P +TY +++ C
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ +KA VF +Q+ + + Y+ M+ K G++ D L + KG PNV
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YN+++ R + + + L K+M+ P+ +Y T+I A R + + + E
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Query: 531 RMNGGVIDRAIAGIMVGVF 549
R G D + G++ +
Sbjct: 600 RSCGFAGDASTIGLVTNML 618
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 204/488 (41%), Gaps = 40/488 (8%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
+ P+ TL L+ SK+ V+L + PD T + L+ K A
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L+ + G + L+ + + + G K + + +KM+ I D Y I++
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K + LF E ++ + F+ Y L L GR +A + DM E+ I
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFT---YSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ +++LI +F ++ AE+L+ E ++ + DP+ + Y
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI--DPD-----IFTY------------ 366
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+++NGF A ++E +IS+ C P VTY+++I +C+
Sbjct: 367 ----------------SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ ++F EM Q+G V Y++++ + + +A + +M + G PN+
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
YN L+D + L + +++ ++R + PD +Y +I +A + + + +
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA-LRDAGLQ 590
+ G + M+ F + EE LL+ MK +G + Y++ + A LRD +
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
Query: 591 MQAQWLQQ 598
A+ +++
Sbjct: 591 ASAELIKE 598
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 185/403 (45%), Gaps = 9/403 (2%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+++ FN + K++ + I + E+M++ GI D Y + + + S+ AL
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR--RSQLSLALA 139
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ K KL P + +L + S R +A+ M E G D + +LI
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLL-NGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ A L + ++G D +V + G ++ L +++ M+ K++
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 258
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
I I++G K + A+ ++ ++ ++G P TY+S+I+ C +S A ++ +
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD---MHGR 481
M ++ + VV +S+++ + K G++ +A L +M + +P+++ Y+SL++ MH R
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
L + + +++ M + P+ V+Y+T+I + +A+ + ++ + E G V +
Sbjct: 379 ---LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ F + + + + M S G + Y+ ++ L
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 101/226 (44%)
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+N F +R A+ V +++ G P VT +S++N YC S A + +M + G+
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+++++ + +A+ LV +M +GC+P++ Y ++++ + ++
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L K+ME+ K+ D V Y T+I + + D + + E G D ++
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + +LL DM + + + ++A G ++A+ L
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 92/205 (44%), Gaps = 6/205 (2%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
AV ++ ++ P V + +++A ++ + + +MQ G + YS +
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ + ++ A+ ++AKM G EP++ +SL++ + +K + L +M P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 503 DKVSYTTVISA---YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
D ++TT+I +N+A E V ++ G D G +V K I+ +
Sbjct: 187 DTFTFTTLIHGLFLHNKASE---AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 560 KLLQDMKSEGTKLDERLYHSAMNAL 584
LL+ M+ + D +Y++ ++ L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGL 268
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/498 (19%), Positives = 209/498 (41%), Gaps = 32/498 (6%)
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAF-NSAMGG 195
+SL + + +P T + ++ +CV+ A L + G+ LA S M G
Sbjct: 213 LSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKG 272
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
Y S +++ ++ +G+V + Y +++ K G+ EK + E K++ + S+
Sbjct: 273 YCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSS 332
Query: 256 PFSTH-------------------------------MYKILCDSLGKSGRAFEALKFFRD 284
+S + + L L K G+ EA + +
Sbjct: 333 VYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDE 392
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
+ KGI + Y ++I + A +++KE + G + L+ Y ++G
Sbjct: 393 VIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGD 452
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+E + MK+A + +D I+ G K + ++ + +SQG +P + Y +
Sbjct: 453 IENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNT 512
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
II+ + + + A V+ EM + G V Y+S++ + K I A+ L+ MK KG
Sbjct: 513 IIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKG 572
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+ ++ Y +L+D + ++++ +L E+ ++P++ Y ++I+ + + +
Sbjct: 573 LKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAI 632
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
Y + G D ++ K ++ + +M S+G D+R + +N L
Sbjct: 633 DLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGL 692
Query: 585 RDAGLQMQAQWLQQNFEG 602
+ G A+ + ++ G
Sbjct: 693 CNKGQFENARKILEDMNG 710
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 200/473 (42%), Gaps = 42/473 (8%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VP+ + + G K+ ++ A+++Y+E K R +L ++ ++ + W +
Sbjct: 295 VPNKVTYSVLIDGCCKNGNIEK-AFEFYSEMKT-KGIRSSVYSLNSILEGYLKCQSWQNA 352
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
++ D + + L + T + L++ + K A L I G ++++N+ + G
Sbjct: 353 FTMFND-ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILG 411
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ + + VY++M G ++ + +M+ Y+K GD E ++F K +
Sbjct: 412 HCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI--L 469
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P T + I+ L K+GR+FE F +G + Y ++I F + LA
Sbjct: 470 PTDTTL-GIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 528
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+++E E G+ L+ + + ++ L ++ MK LK+ +++GF
Sbjct: 529 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 588
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY----------------------CRIA 413
KRR +A ++ +L G P + Y S+I + C +
Sbjct: 589 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLK 648
Query: 414 LYSK-------------AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
Y+ A + EM KG A++ ++ G+ +A ++ M
Sbjct: 649 TYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDM 708
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
K P+V IYN+L+ H + NL++ +L EM R + PD ++Y +++
Sbjct: 709 NGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 137/330 (41%), Gaps = 1/330 (0%)
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
+ G EA + F K +G+ D Y+ + A L +E G +
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
++ ++EG V + L + + M N ++ ++ +++ G+ + +A+ + ++
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
G +P +VTY+ +I+ C+ KA + + EM+ KG V + +S++ Y K
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
++A + G NV+ +N+L+ + + + LW E+ + ++P+ VSY +
Sbjct: 350 QNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 408
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
I + R + K Y E NG + I++ + K IE + MK
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468
Query: 571 KLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ + L AG + + L F
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKF 498
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 115/336 (34%), Gaps = 76/336 (22%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
Q VP +++ + G +K+ LA + Y E ++ P T LI +
Sbjct: 501 QGFVPTCMPYNTIIDGFIKEGNIN-LASNVYREMCEVG-ITPSTVTYTSLIDGFCKGNNI 558
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
D + L D K + D L+ + R K A+ LL G +NS
Sbjct: 559 DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 618
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G+ ++ I +Y+KM + GI
Sbjct: 619 ITGFKNMNNVEEAIDLYKKMVNEGI----------------------------------- 643
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
P Y L D L KSGR A +M KGIL D + LI + + +
Sbjct: 644 ---PCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFEN 700
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A ++ ++ K M+ P V L+ TL +
Sbjct: 701 ARKILEDMNGKNMI--PSV------------LIYNTL---------------------IA 725
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
G K A +++++++ +G +P +TY ++N
Sbjct: 726 GHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761
>gi|255661200|gb|ACU25769.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 426
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 166/338 (49%), Gaps = 6/338 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G +AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITYFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDFSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRR 378
+ G+ D ++ ++ + L + ++ M+ A + + D +S ++ + + +
Sbjct: 70 LKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGI-MPDTVSYSTLLTMYVENQ 128
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ A+ V+ ++ C+ +T +I+ Y ++ + +A+K+F M++ G + VV+Y+
Sbjct: 129 KFLEALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMRKXGIEPNVVSYN 188
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ +YG +A+ L M+ K E NV YN++M ++G+ + L +EM R
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNR 248
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ PD ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 249 GIEPDAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILYQTMIVAYERAGLVAHA 308
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D +A++ L AG +A W+
Sbjct: 309 KRLLHELK----RPDNIPRDTAIHILAGAGRIEEATWV 342
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 154/363 (42%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K GI D Y S+I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDFSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-V 371
A L E G++ D L+ MY+E + L V M+ K + + I+C + +
Sbjct: 98 ARSLISEMRMAGIMPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKC-LLNLITCNVMI 156
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ + + A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLDMAKEADKLFWGMRKXGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y++M+ +YGKT A L+ +M +G EP+ Y++++ + G+ L + L
Sbjct: 217 QNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPDAITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM------------------- 532
++++ V D++ Y T+I AY RA + +E +
Sbjct: 277 FQKLRSSGVEIDQILYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRI 336
Query: 533 ------------NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
G V D + M+ +FSK + +V++ + M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMINLFSKYKKYSNVVEVFEKMRGLGYFPDSNVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/421 (20%), Positives = 184/421 (43%), Gaps = 8/421 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+K T LI Y + +D +S + + V D S L+ + F A ++
Sbjct: 7 PDKYTYSTLITYFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDFSKAISI 66
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G L+A+NS + + K ++ + +M+ AGI+ D+ Y ++ Y +
Sbjct: 67 FSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYSTLLTMYVE 126
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ ++F E + K + + ++ D G+ A EA K F M++ GI +
Sbjct: 127 NQKFLEALSVFAEMREIKCLLNLITCN---VMIDVYGQLDMAKEADKLFWGMRKXGIEPN 183
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y +L+ + A LF+ + K + ++ ++++Y + EK ++++
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQ 243
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M N ++ I++ + K A ++++L S G Q+ Y ++I AY R
Sbjct: 244 EMHNRGIEPDAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILYQTMIVAYERAG 303
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
L + A+++ E+++ + + + + GRI +A W+ + G ++ ++
Sbjct: 304 LVAHAKRLLHELKRPD----NIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFE 359
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
++++ + K V +++++M PD V++AY + REF+ Y E +
Sbjct: 360 RMINLFSKYKKYSNVVEVFEKMRGLGYFPDSNVIALVLNAYGKLREFEKANDAYTEMQDE 419
Query: 534 G 534
G
Sbjct: 420 G 420
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDKYTYSTLITYFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDFSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YNS++++ G+AK R+ L EM + PD VSY+T+++ Y
Sbjct: 67 FSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R +++ +M+ V+ +L +E KL M+ G + +
Sbjct: 127 NQKFLEALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMRKXGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 150/360 (41%), Gaps = 24/360 (6%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ +I ++K + SL + ++ ++PD + S L+ V +KF A
Sbjct: 77 PDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYSTLLTMYVENQKFLEA--- 133
Query: 175 LQVFITDGEIA----LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
L VF EI L+ N + Y +L M ++ M+ GI + Y ++
Sbjct: 134 LSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMRKXGIEPNVVSYNTLLRV 193
Query: 231 YYKIGDSE---KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
Y GD+E + LF + + ++ + Y + GK+ +A ++M
Sbjct: 194 Y---GDAELFGEAIHLFRLMQRKNIEQNVVT---YNTMMMIYGKTLEHEKANNLIQEMHN 247
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
+GI D Y+++I + + ++ A LF++ G+ D + +++ Y GLV
Sbjct: 248 RGIEPDAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILYQTMIVAYERAGLVAH 307
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
++ +K I + I+ G + A V+ Q I G + + +IN
Sbjct: 308 AKRLLHELKRPD-NIPRDTAIHILAGAGRIE---EATWVFRQAIDAGEVKDITVFERMIN 363
Query: 408 AYCRIALYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
+ + YS +VF +M+ G+ D V+A ++ YGK A +M+ +GC
Sbjct: 364 LFSKYKKYSNVVEVFEKMRGLGYFPDSNVIAL--VLNAYGKLREFEKANDAYTEMQDEGC 421
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMHNRGIEPDAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P T ++ L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIPRDTAIH-----ILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F++ G D V ++ Y + EK
Sbjct: 351 EVKDITVFERMINLFSKYKKYSNVVEVFEKMRGLGYFPDSNVIALVLNAYGKLREFEKAN 410
Query: 350 DVVESMKNAKLKISD 364
D M++ SD
Sbjct: 411 DAYTEMQDEGCXFSD 425
>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 156/330 (47%), Gaps = 1/330 (0%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ + L S K+ A A + F+ M EKG+ Y+ ++ + +V+ AE F
Sbjct: 47 YTFNTLIMSASKADYADYATRAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSH 106
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G ++ ++ +Y G EK ++E M N K+ +N + ++
Sbjct: 107 MLQSG-IQVVAAYSAMIAIYTRCGFFEKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGK 165
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A + + + G G V Y S+I AY + LY KA ++F +M++ G + V YS
Sbjct: 166 IEEAEHIMDTMERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSC 225
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
M+ G+ G++RDA+ MK G P +N+L+ ++G+A+N+ + ++ +M+
Sbjct: 226 MIGACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFG 285
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
TPD + V+ AY RA + V+ + R G V D G ++ V+ K + +E +
Sbjct: 286 CTPDSQTLDAVVRAYERAGQTKKVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEAL 345
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ M+ G E + S + A +DAG+
Sbjct: 346 SVFSAMRKAGMAPKEYMCRSLICACKDAGM 375
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 113/540 (20%), Positives = 218/540 (40%), Gaps = 76/540 (14%)
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNS 191
++ + L E K + PD T S ++ +C RA K + A Q G + A FN+
Sbjct: 201 YEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSNFNT 260
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL-------- 243
+ Y K + V MK+ G DS ++ AY + G ++KV +
Sbjct: 261 LISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLREAG 320
Query: 244 --------------FLECKSRKLDSTPFST----------HMYKILCDSLGKSGRAFEAL 279
+L+C +K + FS +M + L + +G +A
Sbjct: 321 WVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRSLICACKDAGMFEDAT 380
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE-------------------- 319
FRDM+ G++ ++I +VK AEELF+
Sbjct: 381 NVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVIINVY 440
Query: 320 ----------------AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
EE G+L D ++ M + L + ++ ++N+ +++
Sbjct: 441 MRYGMHEEAFRIYKLMEEEDGLLPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNSDVELD 500
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+ + ++N ++ K+++++I GCIP +T+ +I+ Y + + +A
Sbjct: 501 EVMCNCVLNTCARFLPLEEVHKIFQEMIDVGCIPNTITFNVMIDLYGKSGMLDRARDASK 560
Query: 424 EMQQKGF-DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
QQ G DK + +S+++ YGK R+ + +M+ G ++ YN ++D +G+A
Sbjct: 561 LAQQLGVADK--ITFSTLINSYGKKQDFRNMEATLWEMQNAGHGGSLEAYNCVLDAYGKA 618
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
+L ++E + ME+ + D SY +I+ Y R + +++ + G + DR
Sbjct: 619 GHLDKLEDVIARMEKSGLQMDLASYNILINIYGRHTKIAEMEALFHKMQEEGFIPDRWTY 678
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ----WLQQ 598
M+ + ++ V + M+ G D Y + A AG ++A W+ Q
Sbjct: 679 NTMIRTYGYADYPDKAVDTFKMMQDSGIMPDRVTYVMLVAAFEKAGNLLEAARWSLWMTQ 738
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 145/340 (42%), Gaps = 3/340 (0%)
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
T + + Y I+ LG + + M G + D + +LI S + A
Sbjct: 7 TRGNVYSYNIMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKADYADYAT 66
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
F+ EKG+ ++L+Y + G VE M + +++ S I
Sbjct: 67 RAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQVVAAYSAMIA--I 124
Query: 375 SKRRGYWA-AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
R G++ A K+ E + + P + + +N Y + +AE + M++ G
Sbjct: 125 YTRCGFFEKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTMERLGMHLG 184
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VV Y+SM+ YGK G A+ L KMK G EP+ Y+ ++ GRA LR ++
Sbjct: 185 VVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQ 244
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
M+R + P ++ T+IS Y +AR V+ + + G D +V + +
Sbjct: 245 AMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAG 304
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
Q +++V++L ++ G D Y + ++ LQ +A
Sbjct: 305 QTKKVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEA 344
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/475 (19%), Positives = 198/475 (41%), Gaps = 6/475 (1%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
++ + L ++W I L +PD +T + L+ S +A A Q+ +
Sbjct: 16 IMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKADYADYATRAFQMMLEK 75
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G + L ++ M Y K + + M +GI + Y ++ Y + G EK
Sbjct: 76 GVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQV-VAAYSAMIAIYTRCGFFEKA 134
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
+ + + K+ P + K + ++ G+ G+ EA M+ G+ Y S+
Sbjct: 135 EKIMEDMWNHKI--APDRDNWLKQM-NTYGQQGKIEEAEHIMDTMERLGMHLGVVGYNSM 191
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
I ++ + A LF++ +E G+ D ++ G + LD ++MK +
Sbjct: 192 ITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLGI 251
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+ +++ + K R V+V + + GC P T +++ AY R K +
Sbjct: 252 MPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQ 311
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
V +++ G+ + +Y +++ +Y K ++A+ + + M+ G P ++ SL+
Sbjct: 312 VLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRSLICACK 371
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
A ++++M+ V P + T+I+ + + + + R + +D
Sbjct: 372 DAGMFEDATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDII 431
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSE-GTKLDERLYHSAMNALRDAGLQMQAQ 594
+++ V+ + EE ++ + M+ E G D YHS + + LQ QA+
Sbjct: 432 AYNVIINVYMRYGMHEEAFRIYKLMEEEDGLLPDSYTYHSMLRMCQKCNLQTQAE 486
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 78/179 (43%), Gaps = 4/179 (2%)
Query: 425 MQQKGFDKC-VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
MQ+ G + V +Y+ M + G + L+ +M GC P+ + +N+L+ +A
Sbjct: 1 MQENGKTRGNVYSYNIMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKAD 60
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR-AREFDMCVKFYNEFRMNGGVIDRAIA 542
+ ++ M + V P +++Y+ ++ Y + + D V F + G+ A
Sbjct: 61 YADYATRAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAF--SHMLQSGIQVVAAY 118
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
M+ ++++ E+ K+++DM + D + MN G +A+ + E
Sbjct: 119 SAMIAIYTRCGFFEKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTME 177
>gi|449460864|ref|XP_004148164.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Cucumis sativus]
Length = 693
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 188/446 (42%), Gaps = 6/446 (1%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSED 142
F+ + G+ E A + ++ + + P K L L +S L +
Sbjct: 189 FNVLMDGLCNQGFMGE-ALELFDIMQSTNGYPPTLHLFKTLFYGLCKSGWLVEAELLIRE 247
Query: 143 FKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHM 201
+ ++ PD + L+ R RK K+A L + G + NS + G+ KL +
Sbjct: 248 MEFRSLYPDKTMYTSLIHGYCRDRKMKMAMQALFRMVKIGCKPDTFTLNSLIHGFVKLGL 307
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
LVY+ M+ GI D + ++ Y + G + + S L S H
Sbjct: 308 VEKGWLVYKLMEDWGIQPDVVTFHIMIGKYCQEGKVDSALMILNSMVSSNLSP---SVHC 364
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L +L ++GR E + M + GI+ D ++ +L+ + E++LA + +
Sbjct: 365 YTVLSSALYRNGRLEEVDGLLKGMLDNGIIPDHVLFLTLMKMYPKGHELQLALNILETIV 424
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ G DP V L L +K V++ + + L ++ +++ + +
Sbjct: 425 KNGCGCDPSVILASAEWQTSSNLEQKFEIVLKEISISDLNLAGVAFSIVISALCETENFC 484
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+ ++S GC P TY S+I C+ L+ A + M+ Y +V
Sbjct: 485 YALDYLHNMVSLGCKPLLFTYNSLIRRLCKERLFEDAMSLIDHMKDYSLFPNTTTYLIIV 544
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y + G + A ++ KM+ G +P+V IY+S++ R K + + E ++K M +
Sbjct: 545 NEYCRQGNVTAAYHILRKMRQVGLKPSVAIYDSIIRCLSREKRICEAEVVFKMMLEAGMD 604
Query: 502 PDKVSYTTVISAYNR-AREFDMCVKF 526
PDK Y T+I Y++ R + C F
Sbjct: 605 PDKKFYLTMIKGYSKNGRILEACELF 630
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 138/330 (41%), Gaps = 17/330 (5%)
Query: 217 IVLDS--GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGR 274
++LDS C+C ++G E+ + F S L+ P S + + L GR
Sbjct: 117 LLLDSMVSCFC-------RLGKFEEALSHFNRLLS--LNYVP-SKVSFNAIFRELCAQGR 166
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
EA +F + GI + L+ + + A ELF + P + L
Sbjct: 167 VLEAFNYFVRVNGAGIYLGCWCFNVLMDGLCNQGFMGEALELFDIMQSTNG-YPPTLHLF 225
Query: 335 LVLMY--IEEG-LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L Y + G LVE L ++ M+ L + ++++G+ + R A++ +++
Sbjct: 226 KTLFYGLCKSGWLVEAEL-LIREMEFRSLYPDKTMYTSLIHGYCRDRKMKMAMQALFRMV 284
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
GC P T S+I+ + ++ L K V+ M+ G VV + M+ Y + G++
Sbjct: 285 KIGCKPDTFTLNSLIHGFVKLGLVEKGWLVYKLMEDWGIQPDVVTFHIMIGKYCQEGKVD 344
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
A+ ++ M + P+V Y L R L +V+ L K M + PD V + T++
Sbjct: 345 SALMILNSMVSSNLSPSVHCYTVLSSALYRNGRLEEVDGLLKGMLDNGIIPDHVLFLTLM 404
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
Y + E + + NG D ++
Sbjct: 405 KMYPKGHELQLALNILETIVKNGCGCDPSV 434
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 172/448 (38%), Gaps = 51/448 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE---FRPEKSTLKLLIRYLVQSKKWD 134
PD +S +HG +K ++ Y KL E +P+ T ++I Q K D
Sbjct: 290 PDTFTLNSLIHGFVKLGLVEKGWLVY-----KLMEDWGIQPDVVTFHIMIGKYCQEGKVD 344
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAM 193
S + + N+ P H + L ++ R + + + LL+ + +G I + F + M
Sbjct: 345 SALMILNSMVSSNLSPSVHCYTVLSSALYRNGRLEEVDGLLKGMLDNGIIPDHVLFLTLM 404
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF-LECKSRKL 252
Y K H + + E + G GC ++ A + S + F + K +
Sbjct: 405 KMYPKGHELQLALNILETIVKNG----CGCDPSVILASAEWQTSSNLEQKFEIVLKEISI 460
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
+ + I+ +L ++ AL + +M SL C T L
Sbjct: 461 SDLNLAGVAFSIVISALCETENFCYALDYLHNM------------VSLGCKPLLFTYNSL 508
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
L KE L E + +++ MK+ L + IVN
Sbjct: 509 IRRLCKER-----------------------LFEDAMSLIDHMKDYSLFPNTTTYLIIVN 545
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
+ ++ AA + ++ G P Y SII R +AE VF M + G D
Sbjct: 546 EYCRQGNVTAAYHILRKMRQVGLKPSVAIYDSIIRCLSREKRICEAEVVFKMMLEAGMDP 605
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
Y +M+ Y K GRI +A L +M P+ IY +L+ G KN+ L+
Sbjct: 606 DKKFYLTMIKGYSKNGRILEACELFEQMVENSIPPSSHIYTALIRGLG-MKNMTDKGCLY 664
Query: 493 -KEMERRKVTPDKVSYTTVISAYNRARE 519
+M R P+ V Y+T+++ Y R E
Sbjct: 665 LGKMSRNGFLPNVVLYSTLMNHYLRVGE 692
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 177/411 (43%), Gaps = 17/411 (4%)
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA----NT 173
+T LL R LV SK S + F + PD +V+ R KF+ A N
Sbjct: 82 ATHGLLCRQLVFSKPQLSEFLYNRKFVVGGAEPDVLLLDSMVSCFCRLGKFEEALSHFNR 141
Query: 174 LLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
LL + +++ A + ++ ++ + ++ AGI L C+ +M+
Sbjct: 142 LLSLNYVPSKVSFNAIFRELCAQGRVLEAFN---YFVRVNGAGIYLGCWCFNVLMDGLCN 198
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G + LF +S + P + H++K L L KSG EA R+M+ + + D
Sbjct: 199 QGFMGEALELFDIMQST--NGYPPTLHLFKTLFYGLCKSGWLVEAELLIREMEFRSLYPD 256
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
++Y SLI + ++K+A + + G D L+ +++ GLVEK V +
Sbjct: 257 KTMYTSLIHGYCRDRKMKMAMQALFRMVKIGCKPDTFTLNSLIHGFVKLGLVEKGWLVYK 316
Query: 354 SMKNAKLKISDCISCAIVNG-FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
M++ ++ D ++ I+ G + + +A+ + ++S P Y + +A R
Sbjct: 317 LMEDWGIQ-PDVVTFHIMIGKYCQEGKVDSALMILNSMVSSNLSPSVHCYTVLSSALYRN 375
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM--KAKGCEPNVW 470
+ + + M G V + +++ MY K ++ A+ ++ + GC+P+V
Sbjct: 376 GRLEEVDGLLKGMLDNGIIPDHVLFLTLMKMYPKGHELQLALNILETIVKNGCGCDPSVI 435
Query: 471 IYNSLMDMHGRAKNLRQ-VEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ ++ + NL Q E + KE+ + V+++ VISA F
Sbjct: 436 LASAEWQ---TSSNLEQKFEIVLKEISISDLNLAGVAFSIVISALCETENF 483
>gi|410110141|gb|AFV61150.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
turbinata]
Length = 441
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 155/325 (47%), Gaps = 3/325 (0%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 2 GLFDEMRQRALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLI 58
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A +F + G D ++ ++ + L + ++ MK A +
Sbjct: 59 ELSRKLCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVM 118
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++ + + + + A+ V+ ++ C+ T +I+ Y ++ + +A+K+
Sbjct: 119 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M++ G + VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G+
Sbjct: 179 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 238
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L +EM+ R V P+ ++Y+T+IS + + + D + + R +G ID+ +
Sbjct: 239 TLEHEKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQIL 298
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMK 566
M+ + + + +LL ++K
Sbjct: 299 FQTMIVAYERAGLVAHAKRLLHELK 323
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 152/319 (47%), Gaps = 6/319 (1%)
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
F +M+++ + D Y++LI F A ++ E+ + D + L+ +
Sbjct: 3 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSR 62
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ K + + +K + A++N F K + + A + ++ + G +P
Sbjct: 63 KLCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 122
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS---MVAMYGKTGRIRDAMWLV 457
+Y++++ Y + +A VF EM++ KC++ ++ M+ +YG+ G ++A L
Sbjct: 123 SYSTLLTMYVENKKFLEALSVFSEMREI---KCLLDLTTCNIMIDVYGQLGMAKEADKLF 179
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
M+ G EPNV YN+L+ ++G A+ + L++ M+R+ + + V+Y +++ Y +
Sbjct: 180 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 239
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
E + E + G + ++ ++ K+ +++ L Q ++S G ++D+ L+
Sbjct: 240 LEHEKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 299
Query: 578 HSAMNALRDAGLQMQAQWL 596
+ + A AGL A+ L
Sbjct: 300 QTMIVAYERAGLVAHAKRL 318
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 166/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F + Y + +
Sbjct: 40 QKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKXSGFXPDLVAYNAMIN 94
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +MK G++ + + Y++L+ + + A +F E E L
Sbjct: 95 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLL 154
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 155 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 214
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 215 RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGVEPNSITYSTIISIWGKV 274
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + ++ +++ + RA + ++L E++R PD +
Sbjct: 275 GKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKR----PDNIPR 330
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ + SK + ++++ M+
Sbjct: 331 DTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVIEVFDKMRG 390
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 391 LGYFPDSDVIAIVLNA 406
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/425 (19%), Positives = 190/425 (44%), Gaps = 12/425 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T LI + + +D+ +S + + V D S L+ + + A ++
Sbjct: 14 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISI 73
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G L+A+N+ + + K ++ + +MK+AG++ ++ Y ++ Y +
Sbjct: 74 FSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVE 133
Query: 234 IGDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ ++F E + K LD T + I+ D G+ G A EA K F M++ GI
Sbjct: 134 NKKFLEALSVFSEMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIE 188
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y +L+ + A LF+ + K + ++ ++++Y + EK ++
Sbjct: 189 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 248
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++ M++ ++ + I++ + K A ++++L S G Q+ + ++I AY R
Sbjct: 249 IQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYER 308
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
L + A+++ E+++ + + + + GRI +A ++ + G ++ +
Sbjct: 309 AGLVAHAKRLLHELKRPD----NIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITV 364
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+ ++ + + K V +++ +M PD V++AY + +EFD Y E +
Sbjct: 365 FERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQ 424
Query: 532 MNGGV 536
G V
Sbjct: 425 EVGCV 429
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 144/359 (40%), Gaps = 47/359 (13%)
Query: 109 KLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKF 168
K F P+ +I ++K + SL + K V+P+ + S L+ V +KF
Sbjct: 78 KXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKF 137
Query: 169 KIA-------------------NTLLQVFITDG-----------------EIALLAFNSA 192
A N ++ V+ G E ++++N+
Sbjct: 138 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 197
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ Y ++ I ++ M+ I + Y +M Y K + EK L E +SR +
Sbjct: 198 LRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGV 257
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
+ + Y + GK G+ A F+ ++ G+ D ++ ++I ++ V
Sbjct: 258 EPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAH 314
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A+ L E L+ P+ + ++I G +E+ V +A + +
Sbjct: 315 AKRLLHE------LKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERM 368
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++ SK + Y ++V++++ G P A ++NAY ++ + KA V++EMQ+ G
Sbjct: 369 IHLLSKYKKYSNVIEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 427
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 8/197 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q + G E + +++ + + K+ ++++K++S+G+ +D + ++
Sbjct: 245 ANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIV 304
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P T ++ L +GR EA FR + G
Sbjct: 305 AYERAGLVAHAKRLLHELK--RPDNIPRDTAIH-----ILAGAGRIEEATYVFRQAIDAG 357
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I + + E+F + G D +V ++ Y + +K
Sbjct: 358 EVKDITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKAN 417
Query: 350 DVVESMKNAKLKISDCI 366
DV M+ SD +
Sbjct: 418 DVYMEMQEVGCVFSDQV 434
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 112/532 (21%), Positives = 218/532 (40%), Gaps = 88/532 (16%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P T +LIR + + VS+ D K +LP+A T N
Sbjct: 28 FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST----------------MN 71
Query: 173 TLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
TLL G+++ S + ++ +M++ + S + ++ ++
Sbjct: 72 TLLLGLCEIGQMS------------------SALKLFREMQAGPFLPTSASHNILLRGFF 113
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKI----LCDSLGKSGRAFEALKFFRDMKEK 288
G +V + + S+ +T Y + LC + R +A++FF++MK
Sbjct: 114 MAG---RVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKAS 170
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVE 346
G+ D Y L+ + + + A LF M P++ VLM Y + G
Sbjct: 171 GVEPDLESYHILLSALSDSGRMAEAHALFS-----AMTCSPDIMTYNVLMDGYCKIGQTY 225
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ +++ + A + + I+N + K A +V+ ++I C+P VT+ ++I
Sbjct: 226 EAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLI 285
Query: 407 NAYCRIALYSKAEKVFIEMQQKG----------------------------FDK------ 432
+C+ + A K+F EM++ G F+K
Sbjct: 286 AGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGL 345
Query: 433 --CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+V Y+S++ + R+ +AM +M+ K C PNV Y+ L+D + + +++ K
Sbjct: 346 TPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAK 404
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
++M+ TP V+Y +I+ + + E + F+ + ++ G + I ++
Sbjct: 405 TLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLC 464
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
K + + ++LL M +EG K D Y+ ++ L A AQ L F+G
Sbjct: 465 KAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL---FDG 513
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/470 (20%), Positives = 211/470 (44%), Gaps = 17/470 (3%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
L+ LV ++K D + L ++ P+AHT + L+ + + A ++ + G
Sbjct: 3 LLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSG 62
Query: 183 EIALLA-FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ + N+ + G ++ S + ++ +M++ + S + ++ ++ G +V
Sbjct: 63 LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RVR 119
Query: 242 ALFLECKSRKLDSTPFSTHMYKI----LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
+ + S+ +T Y + LC + R +A++FF++MK G+ D Y
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESM 355
L+ + + + A LF M P++ VLM Y + G + +++ +
Sbjct: 180 HILLSALSDSGRMAEAHALF-----SAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEI 234
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
A + + I+N + K A +V+ ++I C+P VT+ ++I +C+ +
Sbjct: 235 LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGML 294
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
A K+F EM++ G +V Y++++ ++ K G + A+ L K++ G P + YNS
Sbjct: 295 EDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNS 354
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L+ A+ L + + + EME K P+ ++Y+ +I + R K + + +G
Sbjct: 355 LIQGFCDARRLSEAMQYFDEME-GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHG 413
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G ++ F K +++ + + MK G + ++++ ++ L
Sbjct: 414 YTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGL 463
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/497 (20%), Positives = 211/497 (42%), Gaps = 21/497 (4%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+A ++ + G K Q + A +++ K P ST+ L+ L + + S +
Sbjct: 30 PNAHTYNVLIRGFCKGGQMHQ-AVSVFSDMKS-SGLLPNASTMNTLLLGLCEIGQMSSAL 87
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQ-VFITDGEIALLAFNSAMGGY 196
L + + LP + + + L+ A + + A LQ + + +A +N + G
Sbjct: 88 KLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGL 147
Query: 197 -------NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
N+L + +++MK++G+ D Y ++ A G + ALF
Sbjct: 148 CWENKSANRLE---QAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALF----- 199
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
+ +P Y +L D K G+ +EA +++ + G + Y+ +I + + +
Sbjct: 200 SAMTCSP-DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDK 258
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
V+ A E+F + E + + L+ + + G++E + + M+ K +
Sbjct: 259 VEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNT 318
Query: 370 IVNGFSKRRG-YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++ K+RG + AV ++ +L G P VTY S+I +C S+A + F EM+ K
Sbjct: 319 LIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK 378
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
V+ YS ++ K R+++A + MKA G P V Y L++ + L+
Sbjct: 379 CAPN-VITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSA 437
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+++M+ P+ V + T+I +A + ++ G D ++
Sbjct: 438 LLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISG 497
Query: 549 FSKLSQIEELVKLLQDM 565
+++E+ +L M
Sbjct: 498 LCSANRVEDAQRLFDGM 514
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 160/348 (45%), Gaps = 9/348 (2%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMK-EKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
Y +L +S +G +AL F+ MK EK + D Y +LI S + A +L E
Sbjct: 48 YNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEM 107
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
+K + + ++ ++E E++ V+E M A ++ GF++
Sbjct: 108 RDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNM 167
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK--GFDKCVVAYS 438
A +VY+ ++ G P V+Y +I+ +I ++ K+ EM + G+ V+ +S
Sbjct: 168 EKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFS 227
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ +TG + A+ + M GC+PN + Y +L+ RA+ + Q +L+++M +
Sbjct: 228 TLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQA 287
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEE 557
+ PD V+Y ++I+ Y + D K Y E G+ + ++ F KL ++
Sbjct: 288 CIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGR 347
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALR-----DAGLQMQAQWLQQNF 600
+L+ +M ++G D Y + L D L++ Q ++ F
Sbjct: 348 ANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKF 395
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 185/471 (39%), Gaps = 75/471 (15%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A D + K+ P++ T LI L S + L + + N+ + T S ++
Sbjct: 64 ALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSII 123
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
S V+ K + + +L+ + G + AFN M G+ + + VY+ M +G
Sbjct: 124 KSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYK 183
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
D+ Y IL L K G+ E+
Sbjct: 184 PDN--------------------------------------VSYHILIHGLAKIGKLDES 205
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
LK +M + + Y + +F+++ G+ R E+
Sbjct: 206 LKILSEMAMRA-----AGYVPNVITFSTLIH--------------GLCRTGEL------- 239
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
EK L+V SM A K + ++ G + A +++E++ +Q CIP
Sbjct: 240 -------EKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKM-TQACIPP 291
Query: 399 Q-VTYASIINAYCRIALYSKAEKVFIEMQQ-KGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
V Y S+I YC+ +AEK++ EM G +V +++++ + K G++ A L
Sbjct: 292 DAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANEL 351
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
VA+M KG + Y L+ RA L + +++K+M +K D VS + + +
Sbjct: 352 VAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCK 411
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
D + R +G V + I+ KL ++E+ KL++ K+
Sbjct: 412 TGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKA 462
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 119/257 (46%), Gaps = 3/257 (1%)
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI-PGQVT 401
G++ + L+V E+MK+ S ++N + A+ +++ + + + P + T
Sbjct: 24 GMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWT 83
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y ++I+ C A K+ EM+ K V YSS++ K + ++ ++ +M
Sbjct: 84 YNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMM 143
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
A GC P+V+ +N +M R+ N+ + ++++ M PD VSY +I + + D
Sbjct: 144 AAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLD 203
Query: 522 MCVKFYNEFRMN-GGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+K +E M G + I ++ + ++E+ +++ M G K ++ Y +
Sbjct: 204 ESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTT 263
Query: 580 AMNALRDAGLQMQAQWL 596
+ L A +QA+ L
Sbjct: 264 LIAGLCRAEKVIQAREL 280
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 117/282 (41%), Gaps = 7/282 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + +HG+ K + E A + + P T LI L ++ + + +
Sbjct: 184 PDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKAL 243
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGG 195
+ P+ +T + L+A RA K A L + +T I +A+NS + G
Sbjct: 244 EVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEK-MTQACIPPDAVAYNSLIAG 302
Query: 196 YNKLHMYYSTILVYEKMK-SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
Y K +Y +M AG+ + +++ + K+G + L E ++ L +
Sbjct: 303 YCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAA 362
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
T Y+IL L ++ + EAL+ ++ M+EK L DP S + + A
Sbjct: 363 ---DTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAY 419
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
+F+ + G + +PE L I+ G VE ++E K
Sbjct: 420 AVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAK 461
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 139/267 (52%), Gaps = 15/267 (5%)
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
G +K DVVE MK S I++G+ K + A + ++++++ P ++T+
Sbjct: 243 GKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITF 302
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+I+ +CR + A+KVF EMQ++G VV Y+S++ G++ +A+ L KM
Sbjct: 303 NILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSG 362
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
G +PNV YN+L++ + K L++ ++ ++ +R + P+ +++ T+I AY +A D
Sbjct: 363 MGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD- 421
Query: 523 CVKFYNEFRMNGGVIDRAIAG-------IMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+ F + ++D + ++VG F + ++E KL ++M+ G K D
Sbjct: 422 -----DAFLLRSMMLDTGVCPNVSTYNCLIVG-FCREGNVKEARKLAKEMEGNGLKADLV 475
Query: 576 LYHSAMNALRDAGLQMQA-QWLQQNFE 601
Y+ ++AL G +A + L + FE
Sbjct: 476 TYNILVDALCKKGETRKAVRLLDEMFE 502
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 164/379 (43%), Gaps = 7/379 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY++M I ++ + ++ K+G +K + + K+ + + Y + D
Sbjct: 216 VYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVIT---YNTIID 272
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
K+G+ F+A ++M K I + + LI F V A+++F+E + +G+
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ L+ G +++ L + + M LK + A++NGF K++ A ++
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + +G P +T+ ++I+AY + A + M G V Y+ ++ + +
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G +++A L +M+ G + ++ YN L+D + R+ +L EM + P ++Y
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTY 512
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+I Y R + G + +++ F ++EE +LL +M
Sbjct: 513 NALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLE 572
Query: 568 EGTKLDERLYHSAMNALRD 586
+G + Y + LRD
Sbjct: 573 KGLIPNRTTY----DILRD 587
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 61/326 (18%), Positives = 117/326 (35%), Gaps = 41/326 (12%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ F+ + G +D A + E ++ +P T LI L + K D +
Sbjct: 297 PNEITFNILIDGFCRDENVTA-AKKVFEEMQR-QGLQPNVVTYNSLINGLCSNGKLDEAL 354
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L + + P+ T + L+ + + K A +L G ++ FN+ + Y
Sbjct: 355 GLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K L+ M G+ + Y ++ + + G+ ++ L E + L +
Sbjct: 415 GKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADL 474
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y IL D+L K G +A++ +M E G+ Y +LI
Sbjct: 475 VT---YNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDG------------- 518
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
Y EG L+V M+ + + ++ GF
Sbjct: 519 ----------------------YFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCN 556
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTY 402
+ A ++ +++ +G IP + TY
Sbjct: 557 KGKLEEANRLLNEMLEKGLIPNRTTY 582
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 185/467 (39%), Gaps = 45/467 (9%)
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVY-------------EKMKSAGIV 218
NTLL G ++ + +A LH Y + I Y + AG+
Sbjct: 47 NTLLMALARHGMLSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLA 106
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFS-------------------- 258
DS Y + Y + G LFL R TPF+
Sbjct: 107 PDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAV 166
Query: 259 ------------THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+H+Y I+ L +GRA EA+ D KG + + ++Y +LI + S
Sbjct: 167 FAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCS 226
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
+++LA ++FK + KG L + +L+ + + G VE+ + + M A L +
Sbjct: 227 TGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVT 286
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
++ G A ++ + + G P + T +I+A C+ +A++ +
Sbjct: 287 YTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLV 346
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
QKG V Y+SM+ K+G+ A L+ K+ +G P+ +Y+SL+D R L
Sbjct: 347 QKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLL 406
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ L +M V + V +T +I + R D + G D + +
Sbjct: 407 EAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFI 466
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ + ++E+ ++ M G + + Y++ + + GL QA
Sbjct: 467 RSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQA 513
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 135/332 (40%), Gaps = 38/332 (11%)
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
G V + Y +++ Y GD E +F +S+ P +++C KSG+
Sbjct: 209 GFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSK--GCLPNVRTYTQLIC-GFCKSGKV 265
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
A+ + M E G+ + Y +LI S ++ A L E G+ + CL L
Sbjct: 266 ERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVL 325
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ + G +E+ + S+ +K++ I ++++ K + A + +++I++G
Sbjct: 326 IDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGF 385
Query: 396 IPGQVTYASIINAYCR-------IALY---------------------------SKAEKV 421
+P Y+S+I+ CR I+L S + K+
Sbjct: 386 VPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKM 445
Query: 422 FIE-MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+ M G VV Y+ + Y + GR+ DA ++ +M G PN+ YN+L+ +
Sbjct: 446 ISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYA 505
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
+ Q K M P+ SYT ++
Sbjct: 506 NLGLVSQAFSSLKNMIDNGCKPNDESYTVLLG 537
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 145/362 (40%), Gaps = 33/362 (9%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA-FNSAMGGYNKLHMYYSTILV 208
PD+H S +V A + A LL + G + +A +N+ + GY I +
Sbjct: 177 PDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDI 236
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL--------------------ECK 248
++ M+S G + + Y Q++ + K G E+ L+ +C
Sbjct: 237 FKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCS 296
Query: 249 SRKLDSTPFSTHMYK------------ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
L+ H + +L D+L K GR EA +F + +KGI + I
Sbjct: 297 EGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVI 356
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y S+I + + A L ++ +G + D + L+ E + + + ++ M
Sbjct: 357 YTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMI 416
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ ++ + +++ + + + +++ + G P VTY I +YC+
Sbjct: 417 ESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRME 476
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
AE + I+M G + Y++++ Y G + A + M GC+PN Y L+
Sbjct: 477 DAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLL 536
Query: 477 DM 478
+
Sbjct: 537 GL 538
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 159/371 (42%), Gaps = 22/371 (5%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
+I L +S K+D +L + +PDAH S L+ R K A +LL I G
Sbjct: 360 MIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESG 419
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ + F + + + S ++ ++M +AG+ D Y + +Y + G E
Sbjct: 420 VQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAE 479
Query: 242 ALFLEC--KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK----------G 289
++ ++ + + T ++T + +LG +AF +LK D K G
Sbjct: 480 SMMIQMIDHGVRPNLTTYNTLIKGY--ANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLG 537
Query: 290 ILEDPSIYASLIC---SFASITEVKLAEELFKEAEEKGMLRDPEV--CLKLVLMYIEEGL 344
+L + Y L+ S I ++K+ EEL +E + V C L ++
Sbjct: 538 LLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDR-- 595
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+E+ + M++A L S+ + ++ + + A++ + ++ + +P +Y
Sbjct: 596 LEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRF 655
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
II A C + A+ +F ++ K +++ +A+ ++ + G D L++ M+ +
Sbjct: 656 IICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQN 715
Query: 465 CEPNVWIYNSL 475
C P IY+ L
Sbjct: 716 CRPGSAIYSRL 726
>gi|410110135|gb|AFV61147.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rotundifolia]
Length = 440
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 155/325 (47%), Gaps = 3/325 (0%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 2 GLFDEMRQRALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLI 58
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A +F + G D ++ ++ + L + ++ MK A +
Sbjct: 59 ELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVM 118
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++ + + + + A+ V+ ++ C+ T +I+ Y ++ + +A+K+
Sbjct: 119 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M++ G + VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G+
Sbjct: 179 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 238
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ +
Sbjct: 239 TLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQIL 298
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMK 566
M+ + + + +LL ++K
Sbjct: 299 FQTMIVAYERAGLVAHAKRLLHELK 323
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 152/319 (47%), Gaps = 6/319 (1%)
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
F +M+++ + D Y++LI F A ++ E+ + D + L+ +
Sbjct: 3 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSR 62
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ K + + +K + A++N F K + + A + ++ + G +P
Sbjct: 63 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 122
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS---MVAMYGKTGRIRDAMWLV 457
+Y++++ Y + +A VF EM++ KC++ ++ M+ +YG+ G ++A L
Sbjct: 123 SYSTLLTMYVENKKFLEALSVFSEMREI---KCLLDLTTCNIMIDVYGQLGMAKEADKLF 179
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
M+ G EPNV YN+L+ ++G A+ + L++ M+R+ + + V+Y +++ Y +
Sbjct: 180 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 239
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
E + E + G + ++ ++ K+ +++ L Q ++S G ++D+ L+
Sbjct: 240 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 299
Query: 578 HSAMNALRDAGLQMQAQWL 596
+ + A AGL A+ L
Sbjct: 300 QTMIVAYERAGLVAHAKRL 318
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 168/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F+ + Y + +
Sbjct: 40 QKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKRSGFTPDLVAYNAMIN 94
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +MK G++ + + Y++L+ + + A +F E E L
Sbjct: 95 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLL 154
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 155 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 214
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 215 RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV 274
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + ++ +++ + RA + ++L E++R PD +
Sbjct: 275 GKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKR----PDNIPR 330
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V + A+ M+ + SK + +V++ M+
Sbjct: 331 DTAIHILAGAGRIEEATYVFRQAIDAGEVKNIAVFERMIHLLSKYKKYANVVEVFDKMRG 390
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 391 LGYFPDSNVIAVVLNA 406
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 164/353 (46%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +MK+AG++ ++ Y ++ Y + + ++F
Sbjct: 86 LVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFS 145
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 146 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 200
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M++ ++ +
Sbjct: 201 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPN 260
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G Q+ + ++I AY R L + A+++
Sbjct: 261 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLH 320
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ + + + + GRI +A ++ + G N+ ++ ++ + + K
Sbjct: 321 ELKRPD----NIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKNIAVFERMIHLLSKYK 376
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + +EFD Y E + G V
Sbjct: 377 KYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVGCV 429
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 141/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 119 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 179 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 238
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E +SR ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 239 TLEHEKANNLIQEMQSRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 295
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
++ ++I ++ V A+ L E L+ P+ + ++I G +E+ V
Sbjct: 296 QILFQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDTAIHILAGAGRIEEATYV 349
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + + +++ SK + Y V+V++++ G P A ++NAY +
Sbjct: 350 FRQAIDAGEVKNIAVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGK 409
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 410 LQEFDKANDVYMEMQEVG 427
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 173/392 (44%), Gaps = 13/392 (3%)
Query: 130 SKKWDSIVSLSEDFKIY------NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG- 182
S + + S+ E + Y V P+A + L+ +R+ K A + + G
Sbjct: 216 SDLMNRLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGV 275
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
++ FN+ M G K S + M AG+ D Y M+ K G +
Sbjct: 276 PPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVE 335
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
+F E + R ++ +T ++ L D+ K G L+ R+M +GI D Y +L
Sbjct: 336 MFEEMRERGVNP---NTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALAN 392
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ ++K A ++ +E G+ D L+ + +EG ++ +++ + M + + +
Sbjct: 393 GLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVAL 452
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
+ +++G SK + ++ +++ G P TY +I+A+C+ + K+
Sbjct: 453 DEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLL 512
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
EMQ KG VV Y+ ++ + G++++A L+ M G P+ YN L+D H +
Sbjct: 513 KEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKH 572
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+R E+L + + D YT++I+ +
Sbjct: 573 GKVRDAEELKSA---KGMVSDFGLYTSLINEF 601
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 111/221 (50%), Gaps = 1/221 (0%)
Query: 377 RRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
R G A+ + ++++++ +G P VT+ ++++ C+ + + A + M + G V
Sbjct: 256 RSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVY 315
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y + + K GRI+DA+ + +M+ +G PN ++ +L+D H + N+ +L +EM
Sbjct: 316 TYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREM 375
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
R + D V+Y + + R R+ E R NG D+ ++ F K ++
Sbjct: 376 ATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGEL 435
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ +++ Q+M EG LDE Y + ++ L +G + ++ +
Sbjct: 436 DMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERI 476
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 101/215 (46%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++G K +A + + G P TY + + C+ A ++F EM+++G
Sbjct: 285 LMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERG 344
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ V +++++ + K G + + L +M +G + ++ YN+L + R ++L+
Sbjct: 345 VNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAAN 404
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+ +EM + PDKV+YTT+I + + E DM ++ E G +D ++
Sbjct: 405 DIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGL 464
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
SK + + ++L +M G + D Y ++A
Sbjct: 465 SKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAF 499
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 189/457 (41%), Gaps = 39/457 (8%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTI 206
V PD T + ++ +A+ A +LQ I G + ++ +N+ + G K
Sbjct: 265 VKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAD 324
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
V + M + D Y ++ Y G+ ++V E +R LD + Y +L
Sbjct: 325 GVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVT---YSLLL 381
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
D L K+G+ EA K F M KGI + +IY L+ +A+ + +L G+
Sbjct: 382 DYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGIS 441
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+ + ++ Y ++ ++++ + + M L +++ K AV
Sbjct: 442 PNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLK 501
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ Q+I+ G P V + S++ C + + KAE++F EM +G VV +++++
Sbjct: 502 FNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCN 561
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH---GRAKNLRQVEK------------- 490
G++ A L+ M+ G PNV YN+L+ H GR Q+
Sbjct: 562 EGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLIS 621
Query: 491 -------------------LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
L++EM R+ VTP V+Y+T++ R F + Y
Sbjct: 622 YDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMI 681
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+G D I++ K + ++E K+ Q + S+
Sbjct: 682 KSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSK 718
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/490 (20%), Positives = 204/490 (41%), Gaps = 35/490 (7%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVS-LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
+R + + L+ L +K+ D + L + +P+ +C+ L+ ++ + A
Sbjct: 121 WRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEA 180
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
LL DG G + Y+TI+ D C Q ++
Sbjct: 181 LELLHTMAEDGG----------GNCTPNVVTYNTII------------DGLCKAQAVDR- 217
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+E V ++ K KLD +ST + D L K+ A + M +KG+
Sbjct: 218 -----AEGVLQHMID-KGVKLDVVTYST-----IIDGLCKAQAVDRAEGVLQHMIDKGVK 266
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
D Y ++I V AE + + +KG+ D ++ + V++ V
Sbjct: 267 PDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGV 326
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++ M + +K +++G+ + V+ E++ ++G P VTY+ +++ C+
Sbjct: 327 LQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCK 386
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
++A K+F M +KG V Y ++ Y G I D L+ M A G PN +I
Sbjct: 387 NGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYI 446
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+N ++ + + + + ++ M + ++PD V+Y +I A + D V +N+
Sbjct: 447 FNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMI 506
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
+G + + +V + + E+ +L +M +G + + +++ M L + G M
Sbjct: 507 NDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVM 566
Query: 592 QAQWLQQNFE 601
AQ L + E
Sbjct: 567 VAQRLIDSME 576
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/519 (20%), Positives = 217/519 (41%), Gaps = 10/519 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ + G+ K Q + A D + + +P+ T LI + + +W +V
Sbjct: 302 PDVVTYNTIIDGLCK-AQAVDRA-DGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVV 359
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
E+ + PD T S L+ + K A + I G + + + + GY
Sbjct: 360 RRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGY 419
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + M + GI ++ + ++ AY K ++ +F L
Sbjct: 420 AARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDV 479
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y IL D+L K GR +A+ F M G+ + ++ SL+ ++ + AEEL
Sbjct: 480 VT---YGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEEL 536
Query: 317 FKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
F E ++G+ P V +M EG V +++SM+ ++ + ++ G
Sbjct: 537 FFEMWDQGV--RPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGH 594
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
A ++ + ++S G P ++Y +++ YC+ A +F EM +KG
Sbjct: 595 CLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGA 654
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V YS+++ T R +A L M G + +++ YN +++ + + + K+++
Sbjct: 655 VTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQS 714
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+ + + P+ +++T +I + + + +G V + IM+ +
Sbjct: 715 LCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGL 774
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
++E L M+ G D + ++ + +L G M+A
Sbjct: 775 LDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRA 813
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 161/361 (44%), Gaps = 23/361 (6%)
Query: 169 KIANTLLQVFITDGEIA-----------------LLAFNSAMGGYNKLHMYYSTILVYEK 211
K+ N L++ + GE+A +++FN+ + G + ++ +
Sbjct: 117 KLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRR 176
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
M AG+ D Y +++ ++G E +F + R + ++ IL D+ K
Sbjct: 177 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAV---VFTILIDAHCK 233
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
G A L+ R+M+E+G+ D Y +++ ++K A + E G+ D
Sbjct: 234 KGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 293
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L+ Y +E ++ +++ ++M + + + A+++G SK A +V +++
Sbjct: 294 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 353
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
G P TY +I+A+CR ++ EMQ KG VV Y+ ++ + K G+++
Sbjct: 354 EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMK 413
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+A L+ M G P+ YN L+D H + + +E+L + PD YT+++
Sbjct: 414 NADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSA---KGTVPDLGVYTSIV 470
Query: 512 S 512
Sbjct: 471 G 471
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 105/215 (48%)
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+A V++++ S+G V++ ++I+ CR AE + M + G V Y +++
Sbjct: 134 SAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALI 193
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ GRI DA + KM +G +PN ++ L+D H + + + +L +EM R V
Sbjct: 194 QGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVR 253
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD V+Y +++ RAR+ E R G D ++ + K +++ +++
Sbjct: 254 PDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEI 313
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
Q+M +EG LDE Y + ++ L AG A+ +
Sbjct: 314 KQNMVAEGVGLDEVTYTALISGLSKAGRSADAERV 348
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 141/331 (42%), Gaps = 6/331 (1%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P ++ +L L + G A F +M+ +G+ + ++I ++ AE
Sbjct: 113 PPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAET 172
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L + E G+ D L+ G +E V E M +K + + +++
Sbjct: 173 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 232
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K+ ++++ ++ +G P VTY +I+N CR A + +EM+ G V
Sbjct: 233 KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 292
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y++++ Y K + AM + M A+G + Y +L+ +A E++ EM
Sbjct: 293 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 352
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG---GVIDRAIAGIMVGVFSKL 552
+ PD +YT VI A+ R + ++ E + G GV+ + IM G F KL
Sbjct: 353 MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNV--IMNG-FCKL 409
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
Q++ LL M + G D+ Y+ ++
Sbjct: 410 GQMKNADMLLNAMINIGVSPDDITYNILLDG 440
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 146/341 (42%), Gaps = 38/341 (11%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
Y ++ AG+ ++ + +M ++G+ +F E +SR + T S + +
Sbjct: 104 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVS---FNTMISG 160
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
+ ++G A R M E G+ D Y +LI + ++ A +F++ +GM +
Sbjct: 161 MCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPN 220
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
V L+ + ++G E L++ M+ ++ AIVNG + R +A +
Sbjct: 221 AVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVV 280
Query: 389 QLISQGCIPGQVTYASIINAYCR--------------------------IALYS------ 416
++ S G P VTY ++I+ YC+ AL S
Sbjct: 281 EMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAG 340
Query: 417 ---KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
AE+V EM + G + Y+ ++ + + G ++ + L+ +M+ KG +P V YN
Sbjct: 341 RSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYN 400
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+M+ + ++ + L M V+PD ++Y ++ +
Sbjct: 401 VIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGH 441
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 132/298 (44%), Gaps = 7/298 (2%)
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLV 345
+GI +P+ L+ F + E A + + + G+ PE L VLM + G +
Sbjct: 78 RGIRLEPTSCTGLMSRFPTAPE---ACAFYLQLLDAGL--PPEAKLFNVLMRDLVRLGEL 132
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+V + M++ ++ + +++G + A ++ ++ G P TY ++
Sbjct: 133 ASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGAL 192
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
I CR+ A VF +M +G V ++ ++ + K G + L +M+ +G
Sbjct: 193 IQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGV 252
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
P+ YN++++ RA++L+ + EM + PD V+YTT+I Y + E DM ++
Sbjct: 253 RPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAME 312
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
G +D ++ SK + + ++L +M G + D Y ++A
Sbjct: 313 IKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDA 370
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 142/322 (44%)
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
A EA F+ + + G+ + ++ L+ + E+ A+ +F E + +G+ R
Sbjct: 97 APEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNT 156
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
++ G ++ + M A + A++ G + A V+E++ +G
Sbjct: 157 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG 216
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
P V + +I+A+C+ ++ EM+++G V Y+++V + ++ A
Sbjct: 217 MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSAS 276
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+V +M++ G P+ Y +L+D + + + L ++ + M V D+V+YT +IS
Sbjct: 277 GIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 336
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
++A + E G D +++ F + ++ ++LL++M+++G K
Sbjct: 337 SKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGV 396
Query: 575 RLYHSAMNALRDAGLQMQAQWL 596
Y+ MN G A L
Sbjct: 397 VTYNVIMNGFCKLGQMKNADML 418
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 136/344 (39%), Gaps = 48/344 (13%)
Query: 67 LNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRY 126
L+R PD + + + G+ + + ++ + + +P +LI
Sbjct: 173 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGR--GMKPNAVVFTILIDA 230
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL 186
+ ++++ L + + V PDA T + +V RAR K A
Sbjct: 231 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSA--------------- 275
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
S I+V +M+SAG+ D+ Y +++ Y K E+ + +E
Sbjct: 276 -----------------SGIVV--EMRSAGLRPDTVTYTTLIDGYCK----EEELDMAME 312
Query: 247 CKSRKL-DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
K + + Y L L K+GR+ +A + +M E G+ D + Y +I +F
Sbjct: 313 IKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFC 372
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKIS 363
+VK L KE + KG R P V V+M + + G ++ ++ +M N +
Sbjct: 373 RKGDVKTGLRLLKEMQNKG--RKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPD 430
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
D +++G K + + E ++G +P Y SI+
Sbjct: 431 DITYNILLDGHCK---HGKVTDIEELKSAKGTVPDLGVYTSIVG 471
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 195/481 (40%), Gaps = 41/481 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD ++S +H + K + + A + + P T LI + +W V
Sbjct: 252 PDLVTYNSVVHALCK-ARAMDKAEAFLRQMVN-KRVLPNNWTYNNLIYGYSSTGQWKEAV 309
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+ ++ + +++LPD T S L+ S + K K A + G+ + ++N + GY
Sbjct: 310 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 369
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+++ M GI D + +++AY G +K +F E + +
Sbjct: 370 ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 429
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y+ + +L + G+ +A++ F M ++G+ D Y LI F + + A+EL
Sbjct: 430 VT---YRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 486
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E GM LD+V +I+N K
Sbjct: 487 ISEIMNNGM----------------------HLDIV-------------FFSSIINNLCK 511
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A +++ ++ G P V Y+ +++ YC + KA +VF M G + VV
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 571
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y ++V Y K GRI + + L +M +G +P+ +Y+ ++D +A + + EM
Sbjct: 572 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMT 631
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ D +Y V+ + R FD + + E R I+ M+ + ++E
Sbjct: 632 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 691
Query: 557 E 557
E
Sbjct: 692 E 692
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 153/335 (45%), Gaps = 2/335 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAEELFKE 319
Y IL SL G++ +A R M E G + P++ Y ++I F +V A +LFKE
Sbjct: 185 YSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKE 244
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
++G+ D +V + ++K + M N ++ ++ ++ G+S
Sbjct: 245 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 304
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ AV+V++++ +P VT + ++ + C+ +A VF M KG + V +Y+
Sbjct: 305 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 364
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
M+ Y G + D L M G P+ + +N L+ + L + ++ EM
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
V PD V+Y TVI+A R + D ++ +N+ G D+ ++ F + +
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 484
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+L+ ++ + G LD + S +N L G M AQ
Sbjct: 485 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 519
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 147/343 (42%), Gaps = 7/343 (2%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALK-FFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ H+ + C++ R EAL E G + D Y+ L+ S + A++
Sbjct: 148 IANHLLEGFCEA----KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203
Query: 316 LFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L + E G + P V ++ + +EG V K D+ + M + ++V+
Sbjct: 204 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 263
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
K R A Q++++ +P TY ++I Y + +A +VF EM++
Sbjct: 264 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VV S ++ K G+I++A + M KG P+V+ YN +++ + L + L+
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
M + PD ++ +I AY D + +NE R +G D ++ ++
Sbjct: 384 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++++ ++ M +G D+ Y+ + G ++A+ L
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 486
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/437 (18%), Positives = 173/437 (39%), Gaps = 5/437 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTI-L 207
P +HT + L+ C RA + ++A Q+ T + ++ N + G+ + + +
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 168
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ + G V D Y ++++ G S + L +P + Y + D
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSP-NVVAYNTVID 227
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
K G +A F++M ++GI D Y S++ + + AE ++ K +L
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 287
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG-FSKRRGYWAAVKV 386
+ L+ Y G ++ + V + M+ + + D ++ +++ G K A V
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI-LPDVVTLSMLMGSLCKYGKIKEARDV 346
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
++ + +G P +Y ++N Y +F M G ++ ++ Y
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 406
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G + AM + +M+ G +P+V Y +++ R + + + +M + V PDK +
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y +I + + +E NG +D ++ KL ++ + +
Sbjct: 467 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 526
Query: 567 SEGTKLDERLYHSAMNA 583
+ G D +Y M+
Sbjct: 527 NVGLHPDAVVYSMLMDG 543
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 189/418 (45%), Gaps = 10/418 (2%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGI---VLDSGCYCQ 226
A L++ DG + + ++S M GY ++V+E++K G ++ GC
Sbjct: 377 AEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGC--- 433
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
++ Y KIG K A+ E +S + + Y +L + A F DM
Sbjct: 434 LINLYVKIGKVPKALAVSKEMESHGIKH---NNKTYSMLINGFIHLHDFANAFSIFEDMI 490
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
+ G+ D +IY L+ +F + + A +F+ +++ M ++ + G ++
Sbjct: 491 KSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMK 550
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ LD ++ M+ + + A+++G ++ AV V +++ G P + TY I+
Sbjct: 551 RALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIM 610
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
Y KA + F ++++ G V Y +++ K+GR++ A+ + +M +
Sbjct: 611 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 670
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
N +IYN L+D R ++ + L K+M+ + P+ ++T+ I+A +A +
Sbjct: 671 RNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENV 730
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
E G + ++ ++K+S + +K ++MKS G K DE YH + +L
Sbjct: 731 IQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSL 788
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 193/451 (42%), Gaps = 46/451 (10%)
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
E F S + Y + E+MKS G+ + Y ++ Y K D+E
Sbjct: 285 EPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADK 344
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
LF E K+ KLD+ + +Y + + +SG A + R+M+E GI +Y S++
Sbjct: 345 LFKEAKT-KLDN--LNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMH 401
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEV----CLKLVLMYIEEGLVEKTLDVVESMKNA 358
+ + K +F+ +E G P + CL + +Y++ G V K L V + M++
Sbjct: 402 GYTVAQDEKKCLIVFERLKECGF--RPSIISYGCL--INLYVKIGKVPKALAVSKEMESH 457
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+K ++ ++NGF + A ++E +I G P + Y ++ A+C++ +A
Sbjct: 458 GIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRA 517
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
++F M+++ + ++ + G ++ A+ + M+ GC P V YN+L+
Sbjct: 518 IRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHG 577
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG---- 534
R + + + +M + P++ +YT ++ Y + + +++ + + +G
Sbjct: 578 LIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLD 637
Query: 535 --------------GVIDRAIA-----------------GIMVGVFSKLSQIEELVKLLQ 563
G + A+A I++ +++ + E L++
Sbjct: 638 VYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMK 697
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
MK +G + + S +NA AG +A+
Sbjct: 698 QMKEDGIPPNIHTFTSYINACCKAGDMQRAE 728
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 169/386 (43%), Gaps = 4/386 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+E M++ GI ++ + ++ AY D + E KS L+ T + Y IL
Sbjct: 275 TFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVT---YSILIA 331
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ A A K F++ K K + IY+++I + + AEEL +E EE G+
Sbjct: 332 GYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDA 391
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+V ++ Y +K L V E +K + S ++N + K A+ V
Sbjct: 392 PIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVS 451
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++ S G TY+ +IN + + ++ A +F +M + G Y+ +V + K
Sbjct: 452 KEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKM 511
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G + A+ + +MK + +P+ + +++ A ++++ M R P ++Y
Sbjct: 512 GNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTY 571
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+I R + + V ++ + G + I++ ++ I + + +K
Sbjct: 572 NALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKE 631
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQA 593
G KLD +Y + + A +G +MQ+
Sbjct: 632 SGLKLDVYIYETLLRACCKSG-RMQS 656
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 180/442 (40%), Gaps = 29/442 (6%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
FRP + LI V+ K +++S++ + + + + T S L+ + F A
Sbjct: 424 FRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAF 483
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
++ + I G + +N + + K+ I ++E+MK + + + I+E +
Sbjct: 484 SIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGF 543
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
GD ++ AL R+ P + Y L L + + A+ M GI
Sbjct: 544 AVAGDMKR--ALDTLDLMRRSGCAP-TVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIA 600
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y ++ +A+ ++ A E F + +E G+ D + L+ + G ++ L V
Sbjct: 601 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 660
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
M K+ + I +++G+++R W A + +Q+ G P T+ S INA C+
Sbjct: 661 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCK 720
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+AE V EM G V +++++ + K A+ +MK+ G +P+
Sbjct: 721 AGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAA 780
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV------- 524
Y+ L+ + R + +YT ++S E D+ V
Sbjct: 781 YHCLV----------------TSLLSRATVMEGSTYTGILSVCREMFENDLTVDLRTAVH 824
Query: 525 --KFYNEFRMNGGVIDRAIAGI 544
K+ +E GG + A+ I
Sbjct: 825 WSKWLHEIERTGGALTEALQRI 846
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 134/292 (45%)
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
+ ++ +A + A F+ +G+ + V LV Y + L VE MK
Sbjct: 256 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 315
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ L+++ ++ G+ K +A K++++ ++ + Y++II+A+C+
Sbjct: 316 SEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMD 375
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+AE++ EM++ G D + Y SM+ Y + + + ++K G P++ Y L+
Sbjct: 376 RAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLI 435
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+++ + + + + KEME + + +Y+ +I+ + +F + + +G
Sbjct: 436 NLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQ 495
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
DRAI ++V F K+ ++ +++ + MK E + R + + AG
Sbjct: 496 PDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAG 547
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/247 (18%), Positives = 100/247 (40%), Gaps = 43/247 (17%)
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
S+ + A V +E++ P + + ++ Y + A F M+ +G +
Sbjct: 233 SRPEDWQAVVSAFERIPK----PSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNA 288
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
++S+V Y +R A+ V +MK++G E V Y+ L+ +G+ + +KL+KE
Sbjct: 289 FVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKE 348
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA------------ 542
+ + + + Y+ +I A+ ++ D + E +G ID I
Sbjct: 349 AKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDG--IDAPIDVYHSMMHGYTVA 406
Query: 543 -------------------------GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
G ++ ++ K+ ++ + + + ++M+S G K + + Y
Sbjct: 407 QDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTY 466
Query: 578 HSAMNAL 584
+N
Sbjct: 467 SMLINGF 473
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 173/380 (45%), Gaps = 12/380 (3%)
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
+V+ GC+ +E Y + DS F + L + ++ +L + G
Sbjct: 145 VVIQEGCFDLALEFYNHVIDSNS----FSNIQPNGLS--------FNLVIKALCRVGNVD 192
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+A++ FR M ++ + D Y++L+ + + A L E + +G +P L+
Sbjct: 193 QAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLI 252
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
++G + + +V++M ++ ++V+G + A+ + ++++ C+
Sbjct: 253 SALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCV 312
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P +T+ ++++ + + +V + +++KG+ +YSS+++ K G+ M L
Sbjct: 313 PNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQL 372
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+M KGC+PN +Y++L+D R + ++ EM+ + TP+ +Y++++ Y
Sbjct: 373 WKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFE 432
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
A + + + E N I++ K +++E + + + M S G KLD
Sbjct: 433 AGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVA 492
Query: 577 YHSAMNALRDAGLQMQAQWL 596
Y S ++ +A L Q L
Sbjct: 493 YSSMIHGFCNAQLVEQGMKL 512
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 178/415 (42%), Gaps = 19/415 (4%)
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
NT+L V I +G F+ A+ YN H+ S + ++ G+ + +++A
Sbjct: 140 NTVLNVVIQEG-----CFDLALEFYN--HVIDSN--SFSNIQPNGLSFN-----LVIKAL 185
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
++G+ ++ +F R + ++ Y L L GR EA+ +M+ +G
Sbjct: 186 CRVGNVDQAVEVFRGMSDRNCVADGYT---YSTLMHGLCNEGRIDEAVSLLDEMQVEGTF 242
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+P + LI + ++ A +L KG + + LV +G ++K + +
Sbjct: 243 PNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSL 302
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+ M K +D +V+GF K V+V L +G + +Y+S+I+ +
Sbjct: 303 LNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFK 362
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+++ EM +KG + YS+++ + G+ +A + +MK KG PN +
Sbjct: 363 EGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFT 422
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y+SLM + A ++ + +WKEM +V Y+ +I+ + + + + +
Sbjct: 423 YSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQML 482
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL--DERLYHSAMNAL 584
G +D M+ F +E+ +KL M KL D Y+ +NA
Sbjct: 483 SRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAF 537
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 156/371 (42%), Gaps = 10/371 (2%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+E+ R + V D + + +HG+ + + E A +E + F P +LI
Sbjct: 195 VEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDE-AVSLLDEMQVEGTF-PNPVAFNVLI 252
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
L + L ++ + +P+ T + LV K A +LL + + +
Sbjct: 253 SALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCV 312
Query: 185 AL-LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
+ F + + G+ K + V ++ G + Y ++ +K G E L
Sbjct: 313 PNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQL 372
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
+ E + +T +Y L D L + G+ EA ++ +MK KG + Y+SL+
Sbjct: 373 WKEMVEKGCKP---NTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWG 429
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI-EEGLVEKTLDVVESMKNAKLKI 362
+ ++ A ++KE + EVC +++ + + G +++ L V + M + +K+
Sbjct: 430 YFEAGDIHKAILVWKEMTDND-CNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKL 488
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQG--CIPGQVTYASIINAYCRIALYSKAEK 420
++++GF + +K++ Q++ P VTY ++NA+C S+A
Sbjct: 489 DVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAID 548
Query: 421 VFIEMQQKGFD 431
+ M +G D
Sbjct: 549 ILNTMLDQGCD 559
>gi|359490014|ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 179/412 (43%), Gaps = 34/412 (8%)
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
+ L D ++YNV+ + SC+R ++A+ +L E+ L Y
Sbjct: 87 LGLKLDLRVYNVM---------LRSCLRKGLLELADKVL------AEMDALGIGRNRATY 131
Query: 197 NKLHMYYS-------TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
L YY V +M G DS Y +++ Y G +K + E +
Sbjct: 132 EALVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIRE 191
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
+Y + D+ GK G EAL+ F M+E+G+ D + SLI +
Sbjct: 192 M---GVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGD 248
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
V A ELF + +E+G+ DP++ + ++ E+G + E+MK + S I
Sbjct: 249 VGKALELFSKMQEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAI 308
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+V+ + + + + L S+G P + + NAY + L + KV M+ +G
Sbjct: 309 LVDIYGQYGRFQGPEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEG 368
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ ++ + ++ +G GR +A+ + +K G P+V Y++LM RA+ +V
Sbjct: 369 IEPNLIMLNMLINAFGIAGRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARKFDKVP 428
Query: 490 KLWKEMERRKVTPDKVS----YTTVISAYNRAREFDMCVKFYNE-----FRM 532
++++EME TPD+ + T ++ R ++ +KF N FRM
Sbjct: 429 EIYEEMESAGCTPDRKAREMLQTALLVLQQRHCKYYFGIKFRNRGEWDCFRM 480
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 157/359 (43%), Gaps = 42/359 (11%)
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGI 290
++GD +K L + +++ FS + Y + ++LG GR EA FR+M G+
Sbjct: 35 RVGDVDKAMKLLAQ-----MEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLGL 89
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
D +Y ++ S ++LA+++ E + G+ R+ LV Y G +
Sbjct: 90 KLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWA 149
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
V+ M +GF P Y+ +I Y
Sbjct: 150 VIGEMSR--------------DGFG---------------------PDSFVYSKVIGVYR 174
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
++ KA ++ E+++ G Y+S++ +GK G + +A+ + KM+ +G +P++
Sbjct: 175 DNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIM 234
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+NSL+ H +A ++ + +L+ +M+ + PD + T+IS ++D+ + +
Sbjct: 235 TWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENM 294
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ G AI I+V ++ + + + + + +KSEG + ++ NA GL
Sbjct: 295 KCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSASMFCVLANAYAQQGL 353
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 162/399 (40%), Gaps = 73/399 (18%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
+M++ G L G Y ++EA +G + + A+F E L +Y ++ S
Sbjct: 48 QMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLGL---KLDLRVYNVMLRSCL 104
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
+ G A K +M GI + + Y +L+ + + + E G D
Sbjct: 105 RKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGFGPDSF 164
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
V K++ +Y + G+ +K +++V ++ + + I +I++ F K A++V+E++
Sbjct: 165 VYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKM 224
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF-------------------- 430
+G P +T+ S+I +C+ KA ++F +MQ++G
Sbjct: 225 QEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGEQGKW 284
Query: 431 ---------------DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA------------- 462
+ Y+ +V +YG+ GR + ++ +K+
Sbjct: 285 DVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSASMFCVL 344
Query: 463 ----------------------KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+G EPN+ + N L++ G A + ++ ++ +
Sbjct: 345 ANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEALSVYHHIKDTGI 404
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+PD V+Y+T++ A RAR+FD + Y E G DR
Sbjct: 405 SPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGCTPDR 443
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 91/189 (48%)
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
V Y + I CR+ KA K+ +M+ GF + +Y++++ G GR +A + +
Sbjct: 24 VVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFRE 83
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M G + ++ +YN ++ R L +K+ EM+ + ++ +Y ++ Y RA
Sbjct: 84 MVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGR 143
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ E +G D + ++GV+ ++ ++++++++ G LD+R+Y+S
Sbjct: 144 LNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNS 203
Query: 580 AMNALRDAG 588
++ G
Sbjct: 204 IIDTFGKCG 212
>gi|297820746|ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324094|gb|EFH54515.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 168/363 (46%), Gaps = 44/363 (12%)
Query: 224 YCQIMEAYYKIGD---SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALK 280
+ ++ AY K+G+ +E+V ++ K+ S+P + Y L +S G+ G+ A
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVL-----SKMGSSP-NVISYTALMESYGRGGKCNNAEA 195
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
FR M+ G Y ++ +F + K AEE+F
Sbjct: 196 IFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVF----------------------- 232
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
E LD K + LK + ++ + K Y A KV+ ++ +G V
Sbjct: 233 -----ETLLD----EKKSPLKPDQKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTV 283
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TY S+++ Y + K++ +MQ+ G VV+Y+ ++ YG+ R +A+ + +M
Sbjct: 284 TYNSLMSFETN---YKEVSKIYDQMQRSGIQPDVVSYALLIKAYGRARREEEALSVFEEM 340
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
G P YN L+D + + Q + ++K M R ++ PD SYTT++SAY A +
Sbjct: 341 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 400
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ KF+ +++G + G M+ ++K + +E+++++ + M+ G K ++ + +
Sbjct: 401 EGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTI 460
Query: 581 MNA 583
M+A
Sbjct: 461 MDA 463
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 143/324 (44%), Gaps = 17/324 (5%)
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+G A L+ +R ++G+ D + + F + + L E+ + + E+
Sbjct: 83 TGSAVPVLRQYRTDGDQGLPRD--LVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEM 140
Query: 332 -CLKLVLMYIEEG---LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
L L+ Y + G E+ L V+ M ++ IS A++ + + A ++
Sbjct: 141 DFLMLITAYGKLGNFNGAERVLSVLSKMGSSPNVIS---YTALMESYGRGGKCNNAEAIF 197
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF---IEMQQKGFDKCVVAYSSMVAMY 444
++ S G P VTY I+ + + +AE+VF ++ ++ Y M+ MY
Sbjct: 198 RRMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 257
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K G A + + M KG + YNSLM N ++V K++ +M+R + PD
Sbjct: 258 KKAGNYDKARKVFSSMVGKGVPQSTVTYNSLMSFE---TNYKEVSKIYDQMQRSGIQPDV 314
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQ 563
VSY +I AY RAR + + + E ++ GV A I++ F+ +E+ + +
Sbjct: 315 VSYALLIKAYGRARREEEALSVFEEM-LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 373
Query: 564 DMKSEGTKLDERLYHSAMNALRDA 587
M+ + D Y + ++A +A
Sbjct: 374 SMRRDRIFPDLWSYTTMLSAYVNA 397
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 32/149 (21%)
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ YGK G A +++ + G PNV Y +LM+ +GR E +++ M+
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
P V+Y ++ + + G K + EE+
Sbjct: 205 PEPSAVTYQIILKTF--------------------------VEG------DKFKEAEEVF 232
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ L D K K D+++YH + + AG
Sbjct: 233 ETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 107/495 (21%), Positives = 211/495 (42%), Gaps = 9/495 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + + L G+ + + A + + +P F ++ T L+ + + D +
Sbjct: 608 PNVCTYQNLLRGLCQGGHLVQ-ARQFMSCLLDIP-FAIDEKTFNALLLGICRYGTLDEAL 665
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
L E N LPD HT + L++ R K A +LQ+ + G + +A+ + G
Sbjct: 666 DLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGL 725
Query: 197 -NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
N+ + ++ + +E + G+ D Y +M Y K + + + + ++
Sbjct: 726 INEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPN 785
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
S Y IL K G+ ++L ++ M KGI D Y LI + + +A +
Sbjct: 786 SAS---YNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVK 842
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
++ +G+ D V L+ + E+ + L V MK + S A++NG
Sbjct: 843 FLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLI 902
Query: 376 KRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
R+GY + KV +++ G P Y +++NA CR+ +A ++ EM+ G
Sbjct: 903 -RKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAE 961
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
VA SS++ + G++ +A+ + + M G P V + +LM + + L +
Sbjct: 962 VAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRL 1021
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
ME ++ D VSY +I+ + + + Y E + G + + G +
Sbjct: 1022 MELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGR 1081
Query: 555 IEELVKLLQDMKSEG 569
++ +LL+D++ G
Sbjct: 1082 VQNGEELLEDIEERG 1096
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 163/361 (45%), Gaps = 3/361 (0%)
Query: 154 TCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMK 213
TC+ L+ S +F+ A +LQ + + +N+ + Y K + + + V E M+
Sbjct: 228 TCNILLNSLCTNGEFRKAEDMLQKMKSCHISNSVTYNTILHWYVKKGRFKAALCVLEDME 287
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
+ D Y +++ +I S + A L + RK D TP Y L + + G
Sbjct: 288 RDSVQADVYTYNIMIDKLCRIKRSTR--AFLLLKRMRKDDLTP-DECTYNTLINGFFREG 344
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
+ A F M + ++ + Y ++I + + A + E + G++
Sbjct: 345 KINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYS 404
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ 393
L+ Y + ++ + ++E +K+ + I+ + +++GF + A ++ + +
Sbjct: 405 ALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFED 464
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G P +TY+++IN CR+A + +++ MQ+ G V Y++++ Y K G +++A
Sbjct: 465 GIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEA 524
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ + +G N I+N+L+ R + + E + M R ++ D VS+ +I +
Sbjct: 525 LKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDS 584
Query: 514 Y 514
Y
Sbjct: 585 Y 585
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 158/356 (44%), Gaps = 26/356 (7%)
Query: 165 ARKFKIA----NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD 220
ARKF + N LL T+GE F A + +KMKS I +
Sbjct: 219 ARKFPLGVTTCNILLNSLCTNGE-----FRKAED-------------MLQKMKSCHIS-N 259
Query: 221 SGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALK 280
S Y I+ Y K G K A LE R DS + Y I+ D L + R+ A
Sbjct: 260 SVTYNTILHWYVKKGRF-KAALCVLEDMER--DSVQADVYTYNIMIDKLCRIKRSTRAFL 316
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
+ M++ + D Y +LI F ++ A +F + ++ ++ Y
Sbjct: 317 LLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYC 376
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
++K L ++ M+ + S+ A++NG+ K A+ + E L S+G +
Sbjct: 377 RNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKT 436
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
+I+ +C++ SKA+++ M + G D V+ YS+++ + ++ + ++++M
Sbjct: 437 MRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRM 496
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ G PN +Y +L+ + +A +++ K + ++ RR + + V + ++ A+ R
Sbjct: 497 QKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYR 552
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/548 (18%), Positives = 228/548 (41%), Gaps = 46/548 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ ++G ++ + Y + + ++ P +T +I ++++ D +
Sbjct: 328 PDECTYNTLINGFFREGKINHARYVFNHMLRQ--NLVPSVATYTTMIDGYCRNRRIDKAL 385
Query: 138 SLSEDFKIYNVLPDAHTCSRLVAS-C--------------VRARKFKIANTLLQVFITD- 181
S+ + +I V+P T S L+ C +++R I T+ + I
Sbjct: 386 SILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGF 445
Query: 182 ---GEIA-----------------LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
GEI+ ++ +++ + G ++ + T + +M+ +GI+ +
Sbjct: 446 CQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPND 505
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y ++ Y K G ++ F++ R L + P ++ L + + G EA F
Sbjct: 506 VLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPV---IHNALLHAFYREGMITEAEHF 562
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMY 339
+ M I D + +I S+ + A ++ + G P VC L+
Sbjct: 563 RQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGY--SPNVCTYQNLLRGL 620
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ G + + + + + I + A++ G + A+ + E++I C+P
Sbjct: 621 CQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDI 680
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
TY +++ +CR A + M +KG VAY+ ++ G+++ A ++ +
Sbjct: 681 HTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHE 740
Query: 460 MKAK-GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+ K G + YNSLM+ + +++N+ ++++ +M + +V P+ SY ++ Y +
Sbjct: 741 IICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRG 800
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+F + Y G D +++ S+ I+ VK L+ M EG D ++
Sbjct: 801 QFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFD 860
Query: 579 SAMNALRD 586
+ A +
Sbjct: 861 ILITAFSE 868
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 161/372 (43%), Gaps = 4/372 (1%)
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
I+ A + G+S+ V E +RK P IL +SL +G +A + MK
Sbjct: 197 ILNALVEEGESKHVWLFLRESLARKF---PLGVTTCNILLNSLCTNGEFRKAEDMLQKMK 253
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
I + Y +++ + K A + ++ E + D ++
Sbjct: 254 SCHI-SNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRST 312
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ +++ M+ L +C ++NGF + A V+ ++ Q +P TY ++I
Sbjct: 313 RAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMI 372
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
+ YCR KA + EMQ G + YS+++ Y K + A++L+ +K++G
Sbjct: 373 DGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGIT 432
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
N + L+D + + + +++ K M + PD ++Y+ +I+ R + +
Sbjct: 433 INKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEI 492
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ + +G + + + ++ + K ++E +K D+ G + ++++ ++A
Sbjct: 493 LSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYR 552
Query: 587 AGLQMQAQWLQQ 598
G+ +A+ +Q
Sbjct: 553 EGMITEAEHFRQ 564
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 137/326 (42%), Gaps = 1/326 (0%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
H Y IL + G+ AL + M EKG++ D Y L+ + +VK A +F E
Sbjct: 681 HTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHE 740
Query: 320 AE-EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
++G+ D L+ Y++ V ++ M ++ + +++G+ KR
Sbjct: 741 IICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRG 800
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ ++ +Y+ ++ +G P VTY +I L A K +M +G + +
Sbjct: 801 QFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFD 860
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
++ + + ++ +A+ + MK P+ ++++++ R L K+ EM +
Sbjct: 861 ILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQV 920
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ P+ Y +++A R E D + E + G V ++ + ++EE
Sbjct: 921 GLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEA 980
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNAL 584
V + M G + + M++L
Sbjct: 981 VIVFSSMMRSGMVPTVATFTTLMHSL 1006
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 1/204 (0%)
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
G T ++N+ C + KAE + +M+ V Y++++ Y K GR + A+ ++
Sbjct: 225 GVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHISNSV-TYNTILHWYVKKGRFKAALCVL 283
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
M+ + +V+ YN ++D R K + L K M + +TPD+ +Y T+I+ + R
Sbjct: 284 EDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFRE 343
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ + +N V A M+ + + +I++ + +L +M+ G E Y
Sbjct: 344 GKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTY 403
Query: 578 HSAMNALRDAGLQMQAQWLQQNFE 601
+ +N + A +L ++ +
Sbjct: 404 SALLNGYCKVSMLGPAIYLMEDLK 427
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 131/350 (37%), Gaps = 86/350 (24%)
Query: 59 STNFPTIE-LNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEK 117
S N TI+ + D + P++ ++ +HG +K Q + Y Y +K RP+
Sbjct: 764 SRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRK--GIRPDN 821
Query: 118 STLKLLIRYLVQSKKWDS-----------------------IVSLSEDFKIYNVL----- 149
T +LLI L + D I + SE K++N L
Sbjct: 822 VTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNC 881
Query: 150 -------PDAHTCSRLVASCVRA----RKFKIANTLLQVFITD---------------GE 183
P + T S ++ +R K+ + +LQV + GE
Sbjct: 882 MKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGE 941
Query: 184 I-----------------ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQ 226
I A +A +S + G + ++V+ M +G+V +
Sbjct: 942 IDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTT 1001
Query: 227 IMEAY---YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
+M + KI D+ + L C+ R Y +L L K +AL +
Sbjct: 1002 LMHSLCKESKIADALHLKRLMELCRLR------VDVVSYNVLITGLCKDKHISDALDLYG 1055
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML---RDPE 330
+MK KG+ + + Y +L + S V+ EEL ++ EE+G++ + PE
Sbjct: 1056 EMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIPAYKQPE 1105
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 152/326 (46%), Gaps = 4/326 (1%)
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
H+ +L + G + E++ + +M +GI D + +L+ + +V+ A + +
Sbjct: 58 NHLLNVLVE--GSKMKLLESV--YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLE 113
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E +G+ D L+ ++EEG +E L V M + ++NG+ K
Sbjct: 114 EMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLG 173
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A+ +Q I+ G P Q+TY + +N C+ A KV M Q+G D V Y+
Sbjct: 174 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 233
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+V K G++ +A ++ +M +GC P++ +N+L+ L + L +++ +
Sbjct: 234 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 293
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
V+PD ++ +I+A + + + ++ + E + +G D ++ L ++ +
Sbjct: 294 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 353
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNAL 584
+ LL+DM+S G Y++ ++ L
Sbjct: 354 LDLLKDMESTGCPRSTITYNTIIDGL 379
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 14/267 (5%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ + IL ++L K G AL+ F +MK G D Y +LI + S+ ++ A +L
Sbjct: 298 DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLL 357
Query: 318 KEAEEKGMLRDPEVCLKLVLMY--IEEGL-----VEKTLDVVESMKNAKLKISDCISCAI 370
K+ E G C + + Y I +GL +E+ +V + M + + +
Sbjct: 358 KDMESTG-------CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 410
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++G K + A ++ Q+IS+G P +TY SI+ YC+ KA + M GF
Sbjct: 411 IDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 470
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+ VV Y +++ K GR + A+ ++ M+ KG P YN ++ R N+R
Sbjct: 471 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALS 530
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRA 517
L++EM PD ++Y V R
Sbjct: 531 LFREMAEVGEPPDALTYKIVFRGLCRG 557
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/487 (18%), Positives = 198/487 (40%), Gaps = 49/487 (10%)
Query: 145 IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYY 203
++ + D + L+ V K K+ ++ G + ++ FN+ M + H
Sbjct: 47 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 106
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE---KVAALFLE--CKSRKL------ 252
+ +L+ E+M S G+ D + +M+ + + G E +V A LE C + K+
Sbjct: 107 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 166
Query: 253 ---------------------DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
D Y + L ++ ALK M ++G
Sbjct: 167 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG-- 224
Query: 292 EDPSIYA-----SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
DP ++ + +C + E A+ + + ++G L D L+ +E
Sbjct: 225 HDPDVFTYNIVVNCLCKNGQLEE---AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 281
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ LD+ + + ++N K A++++E++ + GC P +VTY ++I
Sbjct: 282 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 341
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
+ C + KA + +M+ G + + Y++++ K RI +A + +M +G
Sbjct: 342 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 401
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
N +N+L+D + K + +L +M + P+ ++Y ++++ Y + +
Sbjct: 402 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 461
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM----- 581
NG +D G ++ K + + +K+L+ M+ +G + + Y+ +
Sbjct: 462 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 521
Query: 582 -NALRDA 587
N +RDA
Sbjct: 522 RNNIRDA 528
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 142/318 (44%), Gaps = 6/318 (1%)
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI D +Y L+ +++KL E ++ E +G+ D L+ V
Sbjct: 49 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+ ++E M + + + ++ GF + AA++V +++ GC +VT +IN
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168
Query: 409 YCRIALYSKAEKVFIEMQQK---GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
YC++ + E +QQ+ GF+ + Y++ V + + A+ ++ M +G
Sbjct: 169 YCKLG---RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 225
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
+P+V+ YN +++ + L + + + +M R PD ++ T+I+A + +
Sbjct: 226 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 285
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
+ + G D I++ K+ ++L ++MK+ G DE Y++ ++ L
Sbjct: 286 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 345
Query: 586 DAGLQMQAQWLQQNFEGT 603
G +A L ++ E T
Sbjct: 346 SLGKLGKALDLLKDMEST 363
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 161/402 (40%), Gaps = 53/402 (13%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEF------RPEKSTLKLLIRYLVQSK 131
PD +++F++G+ ++ D+ A K+ + P+ T +++ L ++
Sbjct: 192 PDQITYNTFVNGLCQN--------DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG 243
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFN 190
+ + + LPD T + L+A+ C R + + QV + + FN
Sbjct: 244 QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFN 303
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ K+ + + ++E+MK++G D Y +++ +G K L + +S
Sbjct: 304 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 363
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
P ST Y + D L K R EA + F M +GI + + +LI ++
Sbjct: 364 ---GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 420
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A EL + +G+ + ++ Y ++G ++K D++E+M
Sbjct: 421 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT-------------- 466
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
NGF V V VTY ++IN C+ A KV M+ KG
Sbjct: 467 ANGFE--------VDV-------------VTYGTLINGLCKAGRTQVALKVLRGMRIKGM 505
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
AY+ ++ + IRDA+ L +M G P+ Y
Sbjct: 506 RPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTY 547
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 101/471 (21%), Positives = 202/471 (42%), Gaps = 15/471 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + L++ LV K + S+VS+ + + DA S +V SC + + ++
Sbjct: 70 PSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSV 129
Query: 175 LQVFITDG----EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV-LDSGCYCQIME 229
L + G E+ + NK+ + +++K+ I D Y +M+
Sbjct: 130 LAIHFKKGIPYNEVTFTTLIRGLFAENKVK---DAVHLFKKLVRENICEPDEVMYGTVMD 186
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
K G ++K L + + T T +Y I+ D+ K G A +MK+K
Sbjct: 187 GLCKKGHTQKAFDLL---RLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKN 243
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEK 347
I D Y SLI +++ + LF E + P+VC ++ +EG VE
Sbjct: 244 IPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIY--PDVCTFNSVIDGLCKEGKVED 301
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+++ M ++ ++ +++G+ R A ++++ +I +G P ++Y ++IN
Sbjct: 302 AEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALIN 361
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
Y KA ++F E+ Q G +V S ++ + GR A +M+A G P
Sbjct: 362 GYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIP 421
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
N++ + +L+ + + + + + ++ERR+ + YT VI+ + + D +
Sbjct: 422 NLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATF 481
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ + G D M+ + + ++E +L+ M+ G D R Y+
Sbjct: 482 EKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYN 532
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 144/331 (43%), Gaps = 7/331 (2%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N + + K M + +MK I D Y +++ K+ EKV LFLE
Sbjct: 216 YNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMI 275
Query: 249 SRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+ D F++ + D L K G+ +A + M EKG+ + Y ++ +
Sbjct: 276 HLNIYPDVCTFNS-----VIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCL 330
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
++ A +F +KG+ D L+ Y+E+ ++K + + + LK S
Sbjct: 331 RGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVT 390
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
++ G + A ++++ + G IP T+ +++ Y + L +A F +++
Sbjct: 391 CSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLE 450
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
++ D + Y++++ K G++ A K+ G P+V Y +++ + + L
Sbjct: 451 RRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLD 510
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+ + + ++ME PD +Y ++ + R+
Sbjct: 511 EAKDMLRKMEDNGCLPDNRTYNVIVRGFFRS 541
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/418 (20%), Positives = 168/418 (40%), Gaps = 39/418 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + + G+ K TQ+ A+D ++ +P+ ++I + D
Sbjct: 176 PDEVMYGTVMDGLCKKGHTQK-AFDLLRLMEQGIT-KPDTCIYNIVIDAFCKDGMLDGAT 233
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
SL + K N+ PD T + L+ + +++ TL + ++ N
Sbjct: 234 SLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLF--------LEMIHLN------- 278
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
+Y + + V+D C K+ D+E++ +E + T
Sbjct: 279 ----------IYPDVCTFNSVIDGLC------KEGKVEDAEEIMTYMIEKGVEPNEIT-- 320
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
Y ++ D G+ A + F M +KGI D Y +LI + ++ A +LF
Sbjct: 321 ----YNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLF 376
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+E + G+ C L+ E G E + M+ A + C ++ G+ K
Sbjct: 377 REISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKN 436
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A+ + +L + Y ++IN C+ KA F ++ G V+ Y
Sbjct: 437 GLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITY 496
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
++M++ Y + G + +A ++ KM+ GC P+ YN ++ R+ + +++ KE+
Sbjct: 497 TAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEI 554
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/336 (16%), Positives = 149/336 (44%), Gaps = 5/336 (1%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE-DPSIYASLICSFASITEVKLAE 314
P++ + L L + +A+ F+ + + I E D +Y +++ + A
Sbjct: 139 PYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAF 198
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
+L + E+ + P+ C+ +++ + ++G+++ ++ MK + ++++
Sbjct: 199 DLLRLMEQG--ITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLID 256
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G K + ++ ++I P T+ S+I+ C+ AE++ M +KG +
Sbjct: 257 GLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEP 316
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+ Y+ ++ Y G++ A + M KG EP++ Y +L++ + K + + +L+
Sbjct: 317 NEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLF 376
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+E+ + + P V+ + ++ + F++E + G + + ++G + K
Sbjct: 377 REISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKN 436
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+EE + ++ + ++Y + +N L G
Sbjct: 437 GLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNG 472
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/256 (18%), Positives = 98/256 (38%), Gaps = 36/256 (14%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ- 427
+ N F + A ++ Q+++ +P V+++ ++ A + YS +F E+ +
Sbjct: 42 GVSNEFENVKCLDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKL 101
Query: 428 ----------------------------------KGFDKCVVAYSSMVAMYGKTGRIRDA 453
KG V +++++ +++DA
Sbjct: 102 RIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDA 161
Query: 454 MWLVAKM-KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
+ L K+ + CEP+ +Y ++MD + + ++ L + ME+ PD Y VI
Sbjct: 162 VHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVID 221
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
A+ + D NE + D ++ KLSQ E++ L +M
Sbjct: 222 AFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYP 281
Query: 573 DERLYHSAMNALRDAG 588
D ++S ++ L G
Sbjct: 282 DVCTFNSVIDGLCKEG 297
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/263 (18%), Positives = 117/263 (44%), Gaps = 18/263 (6%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
H PD F+S + G+ K+ + + +A+++ + EK I Y V
Sbjct: 276 HLNIYPDVCTFNSVIDGLCKEGKVE--------DAEEIMTYMIEKGVEPNEITYNVVMDG 327
Query: 133 WDSIVSLSEDFKIYNVL------PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIA 185
+ + +I++ + PD + + L+ V +K A L + +G + +
Sbjct: 328 YCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPS 387
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ + + G ++ + +++M++AG + + +C ++ Y+K G E+ + F
Sbjct: 388 IVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFH 447
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ + R+ D+ + +Y + + L K+G+ +A F + G+ D Y ++I +
Sbjct: 448 KLERRREDT---NIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYC 504
Query: 306 SITEVKLAEELFKEAEEKGMLRD 328
+ A+++ ++ E+ G L D
Sbjct: 505 QEGLLDEAKDMLRKMEDNGCLPD 527
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 158/329 (48%), Gaps = 13/329 (3%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
F +H+ + L D + + + LK +M+ KG+ +P Y +I +V AE +
Sbjct: 187 FISHLSEDL-DGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERV 245
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+E +G+ D + L+ + + G V + + M+ K+ A++ G +
Sbjct: 246 LREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQ 305
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A K++ +++ + P +VTY ++I+ YC+ +A + +M Q G +V
Sbjct: 306 TGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVT 365
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y+++ K G + A L+ +M KG E N++ YNSL++ +A N+ Q KL K+ME
Sbjct: 366 YTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 425
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA------GIMVGVFS 550
PD V+YTT++ AY ++RE V+ + R ++DR + +++ F
Sbjct: 426 VAGFHPDAVTYTTLMDAYCKSREM---VRAHELLRQ---MLDRELQPTVVTFNVLMNGFC 479
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+E+ KLL+ M +G + Y+S
Sbjct: 480 MSGMLEDGEKLLKWMLEKGIMPNATTYNS 508
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 182/419 (43%), Gaps = 6/419 (1%)
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL--LAF 189
K + ++ L E+ +I + P+ +T + ++ + K A +L+ I++G IA + +
Sbjct: 203 KGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG-IAPDGVIY 261
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
+ + G+ KL S ++++M+ I D Y ++ + G + LF E
Sbjct: 262 TTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVC 321
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
++L+ + Y L D K G+ EA M + G+ + Y +L E
Sbjct: 322 KRLEPDEVT---YTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE 378
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
V A EL E KG+ + LV + G +++ + +++ M+ A
Sbjct: 379 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 438
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+++ + K R A ++ Q++ + P VT+ ++N +C + EK+ M +KG
Sbjct: 439 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 498
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
Y+S++ Y +R + M AKG P+ YN L+ H +A+N+++
Sbjct: 499 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 558
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
L ++M + SY +I + + ++F + + + R G V DR I I +
Sbjct: 559 FLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADI 617
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 133/282 (47%), Gaps = 9/282 (3%)
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL--------VEKTLDVVESMKNAKLK 361
V A +LF + G+L + C L + ++ E L E L ++E M+ LK
Sbjct: 162 VSFARKLFDKMLNYGLLISVDSC-NLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLK 220
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++ K A +V ++IS+G P V Y ++I+ +C++ S A ++
Sbjct: 221 PNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRL 280
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F EMQ++ + Y++++ +TGR+ +A L +M K EP+ Y +L+D + +
Sbjct: 281 FDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCK 340
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+++ L +M + +TP+ V+YT + + E D + +E G ++
Sbjct: 341 EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT 400
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+V K I++ VKL++DM+ G D Y + M+A
Sbjct: 401 YNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 442
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 162/403 (40%), Gaps = 40/403 (9%)
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
E V L E + + L P++ + +L L K+G+ EA + R+M +GI D I
Sbjct: 204 GEWVLKLIEEMQIKGLKPNPYTYNGVILL---LCKTGKVAEAERVLREMISEGIAPDGVI 260
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y +LI F + V A LF E +++ + D ++ + G V + + M
Sbjct: 261 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 320
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA------------- 403
+L+ + A+++G+ K A ++ Q++ G P VTY
Sbjct: 321 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 380
Query: 404 ----------------------SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
S++N C+ +A K+ +M+ GF V Y++++
Sbjct: 381 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 440
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y K+ + A L+ +M + +P V +N LM+ + L EKL K M + +
Sbjct: 441 DAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIM 500
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ +Y ++I Y + Y G V D I++ K ++E L
Sbjct: 501 PNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFL 560
Query: 562 LQDMKSEGTKLDERLYHSAMNAL--RDAGLQMQAQWLQQNFEG 602
+DM +G L Y++ + R L+ + + Q EG
Sbjct: 561 HRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 603
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 173/384 (45%), Gaps = 7/384 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P+ ++I +L + K D S E LPD T + LV S +A K++ +
Sbjct: 119 KPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQ 178
Query: 174 LLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+ + ++ G L+ + + + GY K + + ++K G Y +++
Sbjct: 179 IFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLC 238
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K ++ LF E + + T LC K+G+ EA M E G
Sbjct: 239 KHDRHDEARELF-EMAAGDVQDVIVYTSFISGLC----KAGKLDEAKAVHVKMIEAGCAP 293
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
DP Y +I S V A+EL +A E+ + VC LV + VE+ ++
Sbjct: 294 DPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVIL 353
Query: 353 ESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
E M + ++ A+++G K A V +++ GC+P VTY +II+A+C+
Sbjct: 354 ERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCK 413
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ +A ++F M ++G VVAY+ ++ Y + ++ +A+ ++ +M +G +PNV
Sbjct: 414 VGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVS 473
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEM 495
++++D + + + L ++M
Sbjct: 474 LSTIVDGLCKESRVEEARLLMEKM 497
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 195/462 (42%), Gaps = 15/462 (3%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
FRP+ T LIR ++++ V+L + K + P T L+ + + +
Sbjct: 48 FRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIR---KLCELNFTD 104
Query: 173 TLLQVF--ITDGEIALLAF--NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
LQ+F + D ++ AF +G K++ +E+M +G + D Y ++
Sbjct: 105 KALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLV 164
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
+ +K E+ +F E S K S T Y + + K+GR +AL R +K
Sbjct: 165 HSLFKACKWEQGHQIFEEMLS-KGHSPELVT--YATVVNGYCKAGRIDQALSLMRRLKGT 221
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G S+Y++LI A ELF+ A G ++D V + + G +++
Sbjct: 222 GRSPSGSLYSTLIDGLCKHDRHDEARELFEMA--AGDVQDVIVYTSFISGLCKAGKLDEA 279
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
V M A I+ K A ++ +Q + + C+PG +++
Sbjct: 280 KAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDG 339
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKC--VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
C+ +A + M + G D+ VV YS+++ K R+ DA ++ KM+ GC
Sbjct: 340 LCKSRRVEEACVILERMLETG-DRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCV 398
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+V Y +++D + L + +L++ M R D V+Y +I Y RA + D +
Sbjct: 399 PDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAM 458
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
E G + +V K S++EE L++ M E
Sbjct: 459 IEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFE 500
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 184/440 (41%), Gaps = 13/440 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + + G K Q + A + E K P T LIR L + D +
Sbjct: 50 PDDFTYGTLIRGFCKAEQIPQ-AVNLLGEMKA-AGITPTIVTFGSLIRKLCELNFTDKAL 107
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+ V PDA + ++ + K +A + + + G + + + +
Sbjct: 108 QIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSL 167
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K + ++E+M S G + Y ++ Y K G ++ +L R+L T
Sbjct: 168 FKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLM-----RRLKGTG 222
Query: 257 FSTH--MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
S +Y L D L K R EA + F G ++D +Y S I ++ A+
Sbjct: 223 RSPSGSLYSTLIDGLCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAK 280
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
+ + E G DP ++ ++ V + ++++ K + +V+G
Sbjct: 281 AVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGL 340
Query: 375 SKRRGYWAAVKVYEQLISQGC-IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
K R A + E+++ G P VTY+++I+ C+ A V +M++ G
Sbjct: 341 CKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPD 400
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VV Y++++ + K GR+ +A L +M +GC +V YN L+ + RA + + + +
Sbjct: 401 VVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIE 460
Query: 494 EMERRKVTPDKVSYTTVISA 513
EM R + P+ VS +T++
Sbjct: 461 EMAGRGIQPNVVSLSTIVDG 480
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 4/246 (1%)
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
EA + F+D D Y +LI F ++ A L E + G+ L+
Sbjct: 35 EAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLI 94
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
E +K L + M + K+K + ++ K A +E+++ GC+
Sbjct: 95 RKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCL 154
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P +VTY ++++ + + + ++F EM KG +V Y+++V Y K GRI A+ L
Sbjct: 155 PDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSL 214
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE-KLWKEMERRKVTPDKVSYTTVISAYN 515
+ ++K G P+ +Y++L+D G K+ R E + EM V D + YT+ IS
Sbjct: 215 MRRLKGTGRSPSGSLYSTLID--GLCKHDRHDEARELFEMAAGDVQ-DVIVYTSFISGLC 271
Query: 516 RAREFD 521
+A + D
Sbjct: 272 KAGKLD 277
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 109/265 (41%), Gaps = 2/265 (0%)
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G + C L+ +++ +G + V + + D ++ GF K A
Sbjct: 12 GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
V + ++ + G P VT+ S+I C + KA ++F +M Y+ ++
Sbjct: 72 VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K ++ A +M GC P+ Y L+ +A Q ++++EM + +P+
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
V+Y TV++ Y +A D + + G ++ ++ K + +E +L +
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE 251
Query: 564 DMKSEGTKLDERLYHSAMNALRDAG 588
+ G D +Y S ++ L AG
Sbjct: 252 --MAAGDVQDVIVYTSFISGLCKAG 274
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 90/203 (44%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
T S++ + + +A +VF + F Y +++ + K +I A+ L+ +M
Sbjct: 19 TCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEM 78
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
KA G P + + SL+ + +++ +M KV PD YT VI + +
Sbjct: 79 KAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKL 138
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
D+ ++ +G + D+ ++V K + E+ ++ ++M S+G + Y +
Sbjct: 139 DLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATV 198
Query: 581 MNALRDAGLQMQAQWLQQNFEGT 603
+N AG QA L + +GT
Sbjct: 199 VNGYCKAGRIDQALSLMRRLKGT 221
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 166/358 (46%), Gaps = 23/358 (6%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++E+MK GI D Y ++ + + G +K A L+C + +TH I +
Sbjct: 459 MFEEMKERGIEPDIVTYNILVGGFSRNG-LKKEALELLDCIGTQGLKPNSATHNRII--E 515
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L +G+ EA F +++K LE+ Y++++ + + A ELF ++G+L
Sbjct: 516 GLCMAGKVKEAEAFLNTLEDK-CLEN---YSAMVDGYCKANFTRKAYELFSRLSKQGILV 571
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ C KL+ EG +K L ++E M ++ + + ++ F + A V+
Sbjct: 572 KKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVF 631
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ L+ +G P +TY +IN YCR+ +A +F +M+++G V+ Y+ ++ + K
Sbjct: 632 DMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKV 691
Query: 448 G---------------RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
DA ++MK G +P+V Y L+D H + NL+ L+
Sbjct: 692 NLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLY 751
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID-RAIAGIMVGVF 549
EM R + PD V+YT ++S+ + D + NE G D RA++ + G+
Sbjct: 752 DEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGIL 809
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 115/538 (21%), Positives = 219/538 (40%), Gaps = 49/538 (9%)
Query: 85 SFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFK 144
+FL L + ++A Y K+L P T + I+ L + ++ V + + +
Sbjct: 196 NFLMNRLIEHGKIDMAVAIYRHLKRLG-LNPNDYTYGIFIKALCRKGNFEEAVDVFREME 254
Query: 145 IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF-ITDGEIALLAFNSAMGGYNKLHMYY 203
V P+A TCS + ++ + L+ + I A+ + + G+
Sbjct: 255 EAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLK 314
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST-PFSTHMY 262
V+ M + GI D Y ++ AY K G+ + AL + S + + + +
Sbjct: 315 EAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSIL 374
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
+ LC+ G A E + F++ ++ GI D +Y ++ + + +V+ A EL E +
Sbjct: 375 QCLCE----MGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKG 430
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
+ M D L+ Y +G + ++ E MK ++ +V GFS+
Sbjct: 431 RRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKE 490
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+++ + + +QG P T+ II C +AE ++ DKC+ YS+MV
Sbjct: 491 ALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE----DKCLENYSAMVD 546
Query: 443 MYGKT-----------------------------------GRIRDAMWLVAKMKAKGCEP 467
Y K G A+ L+ +M A EP
Sbjct: 547 GYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEP 606
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
N +Y L+ R ++++ + ++ + R +TPD ++YT +I+ Y R +
Sbjct: 607 NQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIF 666
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK-SEGTKLDERLYHSAMNAL 584
N+ + G D +++ SK++ ++ + LQ K SE K+D + S M +
Sbjct: 667 NDMKERGIKPDVITYTVVLDGHSKVNL--KMARSLQFSKGSEEEKMDASPFWSEMKEM 722
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 166/382 (43%), Gaps = 17/382 (4%)
Query: 227 IMEAYYKIGD-SEKVAALFLECKSRKLDSTPFSTHMY--KILCDSLGKSGRAFEALKFFR 283
+++AY ++G E + ALF + K R F H+ L + L + G+ A+ +R
Sbjct: 163 LVKAYVRVGMFDEAIDALF-QTKRRG-----FVPHIMSCNFLMNRLIEHGKIDMAVAIYR 216
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+K G+ + Y I + + A ++F+E EE G+ + C YIE
Sbjct: 217 HLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCST----YIEGL 272
Query: 344 LVEKTLDV----VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
K D+ + +++ A I A++ GF A V+ ++++G P
Sbjct: 273 CSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDG 332
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
Y ++I+AYC+ +A + +M G V SS++ + G + + +
Sbjct: 333 YIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKE 392
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
+ G + +YN ++D + + + +L EM+ R+++ D V YTT+I+ Y +
Sbjct: 393 FRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGK 452
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ E + G D I+VG FS+ +E ++LL + ++G K + ++
Sbjct: 453 LVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNR 512
Query: 580 AMNALRDAGLQMQAQWLQQNFE 601
+ L AG +A+ E
Sbjct: 513 IIEGLCMAGKVKEAEAFLNTLE 534
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 112/269 (41%), Gaps = 2/269 (0%)
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA-IVNGFSKRRGYWAAVKVYEQLISQ 393
LV Y+ G+ ++ +D + K + +SC ++N + AV +Y L
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGF-VPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRL 221
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G P TY I A CR + +A VF EM++ G + V S+ + R
Sbjct: 222 GLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLG 281
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ ++A + + Y +++ L++ E ++ +M + PD Y +I A
Sbjct: 282 YEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHA 341
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
Y +A V +N+ NG + I ++ ++ E+V ++ + G LD
Sbjct: 342 YCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLD 401
Query: 574 ERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
E LY+ ++AL G +A L +G
Sbjct: 402 EVLYNIVVDALCKLGKVEEAVELLNEMKG 430
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 105/500 (21%), Positives = 211/500 (42%), Gaps = 45/500 (9%)
Query: 114 RPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
RP S + L+ + + KK+D ++SL E + + + +T + L+ R + +A
Sbjct: 80 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 139
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS--------- 221
LL + G E +++ +S + GY + + ++M G D+
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 222 --------------------GC------YCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
GC Y ++ K GD + L + ++ K+++
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA- 258
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ +Y + DSL K +AL F +M+ KG+ + Y+SLI + A
Sbjct: 259 --NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 316 LFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L + E+ + +P V L+ +++EG + + + + M + +++NG
Sbjct: 317 LLSDMIERKI--NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 374
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
F A ++E +IS+ C P VTY ++IN +C+ + ++F EM Q+G
Sbjct: 375 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V Y++++ + + +A + +M + G PN+ YN+L+D + L + +++
Sbjct: 435 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 494
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
++R K+ P +Y +I +A + + + + G D I M+ F +
Sbjct: 495 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Query: 554 QIEELVKLLQDMKSEGTKLD 573
EE L + M+ +G D
Sbjct: 555 LKEEADALFRKMREDGPLPD 574
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 185/407 (45%), Gaps = 9/407 (2%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
++ FN + K+ + I + EKM+ GI + Y ++ + + S+ AL
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCR--RSQISLALA 141
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
L K KL P + +L + R +A+ M E G D + +LI
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLL-NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ A L ++G + +V + G ++ +++ M+ AK++ +
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
I +++ K R A+ ++ ++ ++G P +TY+S+I+ C +S A ++ +
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD---MHGR 481
M ++ + VV +++++ + K G++ +A L +M + +P+++ Y+SL++ MH R
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
L + + +++ M + P+ V+Y T+I+ + +A+ D V+ + E G V +
Sbjct: 381 ---LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
++ F + + + + M S+G + Y++ ++ L G
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 92/205 (44%), Gaps = 6/205 (2%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+ ++ ++ +P + +++A ++ + + +MQ+ G + Y+ ++
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ + +I A+ L+ KM G EP++ +SL++ + K + L +M P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 503 DKVSYTTVISA---YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
D +++TT+I +N+A E V + G + G++V K I+
Sbjct: 189 DTITFTTLIHGLFLHNKASE---AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 560 KLLQDMKSEGTKLDERLYHSAMNAL 584
LL M++ + + +Y + +++L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSL 270
>gi|356540373|ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 881
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 146/310 (47%), Gaps = 6/310 (1%)
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
G +L +STI +MK G L+S Y +++ Y G +K + E + R +
Sbjct: 201 GAGRLEDTWSTI---NEMKQKGFPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIRERGIS- 256
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
TH+ + D+ GK G EALK F+ M+++G+ + + SLI + A
Sbjct: 257 --LDTHICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAF 314
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
LF + +E+G+ DP++ + ++ E+G + ESMK K + +V+ +
Sbjct: 315 HLFTDMQEQGLYPDPKIFVTIISCLGEQGKWDIIKKYFESMKIRGNKEYGAVYAVLVDIY 374
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+ + A + + L S+G + + + NAY + L + V M+ +G + +
Sbjct: 375 GQYGKFQNAGECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEGIEPNI 434
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V + ++ +G GR +A+ + +K G P+V Y +LM RAK +V ++KE
Sbjct: 435 VMLNMLINAFGNAGRYMEAISVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVPIIYKE 494
Query: 495 MERRKVTPDK 504
ME TPD+
Sbjct: 495 MENDGCTPDR 504
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 156/359 (43%), Gaps = 42/359 (11%)
Query: 233 KIGDSEKVAALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K GD ++ +L +E K L ST Y L ++LG GR EA F++M G
Sbjct: 96 KEGDLDRAMSLLSQMEAKGFHLSSTS-----YACLIEALGNVGRTSEADMLFKEMVCYGY 150
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
++Y SL+ F + LA + KE ++ G+ R E + Y+ G +E T
Sbjct: 151 KPKLNLYHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYVGAGRLEDTWS 210
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ MK + N F Y+ ++ Y
Sbjct: 211 TINEMKQKGFPL---------NSF--------------------------MYSKVVGIYR 235
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
++ KA +V E++++G +S++ +GK G + +A+ L KM+ +G PN+
Sbjct: 236 DNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIV 295
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+NSL+ H + + + L+ +M+ + + PD + T+IS ++D+ K++
Sbjct: 296 TWNSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDPKIFVTIISCLGEQGKWDIIKKYFESM 355
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
++ G A+ ++V ++ + + + + +Q +KSEG + ++ NA GL
Sbjct: 356 KIRGNKEYGAVYAVLVDIYGQYGKFQNAGECVQALKSEGVLVSPSIFCVLANAYAQQGL 414
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 158/352 (44%), Gaps = 5/352 (1%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
++S + G+ K + V ++M GI Y ++ Y G E + E K
Sbjct: 157 YHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYVGAGRLEDTWSTINEMK 216
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ P ++ MY + +G +A++ +++E+GI D I S+I +F
Sbjct: 217 QKGF---PLNSFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYG 273
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
E+ A +LFK+ +++G+ + L+ + +EG K + M+ L I
Sbjct: 274 ELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDPKIFV 333
Query: 369 AIVNGFSKRRGYWAAVKVY-EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
I++ ++ G W +K Y E + +G YA +++ Y + + A + ++
Sbjct: 334 TIISCLGEQ-GKWDIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNAGECVQALKS 392
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
+G + + Y + G + ++ M+A+G EPN+ + N L++ G A +
Sbjct: 393 EGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYME 452
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
++ ++ V+PD V+YTT++ A+ RA++FD Y E +G DR
Sbjct: 453 AISVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDGCTPDR 504
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 200/483 (41%), Gaps = 39/483 (8%)
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
+ L ++R L +K +++ K P A + ++ + ++ + L
Sbjct: 160 TELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNE 219
Query: 178 FITDGEI--ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG 235
T+G + +++ + + KL S + +MK G+ + Y ++ ++K+
Sbjct: 220 MSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLD 279
Query: 236 DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
D +LF E + + F+ Y L LGK+GR EA FF +M+ +G D
Sbjct: 280 DVHGALSLFEEMRHQYCRPDVFT---YTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTV 336
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
+ ++I + A +LF+E G LR C+ V+ Y +++++
Sbjct: 337 VMNNMINFLGKAGRLDDAMKLFQEM---GTLR----CIPSVVTYN---------TIIKAL 380
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+K + S+ S W +E++ G P TY+ +I+ +C+
Sbjct: 381 FESKSRASEVPS-------------W-----FERMKESGISPSSFTYSILIDGFCKTNRM 422
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
KA + EM +KGF C AY S++ GK R A L ++K + +Y +
Sbjct: 423 EKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVM 482
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ G+A L ++ EM + PD +Y ++S R D + + +G
Sbjct: 483 IKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGC 542
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
+ D I++ +K +++L +MK + D Y++ + AL AG+ +A
Sbjct: 543 IPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAK 602
Query: 596 LQQ 598
L +
Sbjct: 603 LME 605
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 147/346 (42%), Gaps = 5/346 (1%)
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
T Y L + K GR A + +MKE G+ IY LI F + +V A LF+
Sbjct: 230 TMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFE 289
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E + D +L+ + G +++ M+ + + ++N K
Sbjct: 290 EMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAG 349
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV---FIEMQQKGFDKCVV 435
A+K+++++ + CIP VTY +II A S+A +V F M++ G
Sbjct: 350 RLDDAMKLFQEMGTLRCIPSVVTYNTIIKAL--FESKSRASEVPSWFERMKESGISPSSF 407
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
YS ++ + KT R+ AM L+ +M KG P Y SL+D G+AK +L++E+
Sbjct: 408 TYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 467
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + Y +I +A D + ++E G D ++ ++ +
Sbjct: 468 KENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGML 527
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+E + ++ M+ G D Y+ +N L G +A + N +
Sbjct: 528 DEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK 573
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 155/383 (40%), Gaps = 40/383 (10%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+ L + HQ PD + + G+ K + E AY ++ E ++ RP+ + +I
Sbjct: 285 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDE-AYHFFYEMQR-EGCRPDTVVMNNMI 342
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
+L ++ + D + L ++ +P T NT+++
Sbjct: 343 NFLGKAGRLDDAMKLFQEMGTLRCIPSVVT----------------YNTIIKALFESKSR 386
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
A S + + +E+MK +GI S Y +++ + K EK L
Sbjct: 387 A-----SEVPSW------------FERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLL 429
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E + P + Y L D+LGK+ R A + F+++KE +YA +I
Sbjct: 430 EEMDEKGFPPCPAA---YCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHL 486
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ A +F E + G D L+ G++++ L + M+ I D
Sbjct: 487 GKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGC-IPD 545
Query: 365 CISCAIV-NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
S I+ NG +K G A+++ + P V+Y +++ A ++ +A K+
Sbjct: 546 INSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLME 605
Query: 424 EMQQKGFDKCVVAYSSMVAMYGK 446
EM GF+ ++ YSS++ GK
Sbjct: 606 EMNTLGFEYDLITYSSILEAIGK 628
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/457 (20%), Positives = 179/457 (39%), Gaps = 38/457 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P A+ ++S + ++ + Q ++ ++ YNE P+ T LI + + DS
Sbjct: 192 PTAQAYNSMIIMLMHEGQYGKV-HELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAT 250
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF--ITDGEIALLAFNSAMGG 195
L + K + P KI L+ +F + D AL F
Sbjct: 251 QLLNEMKENGMQPTT----------------KIYTMLITLFFKLDDVHGALSLFEEMRHQ 294
Query: 196 YNKLHMYYSTILV---------------YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
Y + ++ T L+ + +M+ G D+ ++ K G +
Sbjct: 295 YCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDA 354
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKS-GRAFEALKFFRDMKEKGILEDPSIYAS 299
LF E + L P S Y + +L +S RA E +F MKE GI Y+
Sbjct: 355 MKLFQEMGT--LRCIP-SVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSI 411
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
LI F ++ A L +E +EKG P L+ + + ++ + +K
Sbjct: 412 LIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 471
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
S + ++ K A+ +++++ GC P Y ++++ R + +A
Sbjct: 472 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 531
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
MQ+ G + +Y+ ++ KTG AM +++ MK P+V YN+++
Sbjct: 532 STMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGAL 591
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
A + KL +EM D ++Y++++ A +
Sbjct: 592 SHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGK 628
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 81/209 (38%), Gaps = 36/209 (17%)
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM------YGKT- 447
C+ + ++ + SKA +F +++ + AY+SM+ M YGK
Sbjct: 155 CVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVH 214
Query: 448 -----------------------------GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
GR A L+ +MK G +P IY L+ +
Sbjct: 215 ELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITL 274
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ ++ L++EM + PD +YT +I +A D F+ E + G D
Sbjct: 275 FFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPD 334
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+ M+ K ++++ +KL Q+M +
Sbjct: 335 TVVMNNMINFLGKAGRLDDAMKLFQEMGT 363
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 150/342 (43%), Gaps = 1/342 (0%)
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
TP MY + D + K G A + M G+ + Y +++ S K AE
Sbjct: 283 TP-DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
EL E +K D LV + + GLV++ ++++E M + ++NGF
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K AV + + + S GC P V+Y ++ C + AE++ +M Q+G
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V +++++ K G + A+ L+ +M GC P++ Y++++D G+A + +L
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M + ++P+ + Y+++ A +R + ++ ++ + D + ++ K +
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + M S G +E Y + L GL +AQ L
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQEL 623
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 185/430 (43%), Gaps = 4/430 (0%)
Query: 162 CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
C+ R + + ++ D ++ FN+ +G + ++ V +M G D
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y I++ K G E + S L + Y + L + R EA +
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKP---NVVCYNTVLKGLCSAERWKEAEEL 343
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+M +K D + L+ F V EL ++ G + D ++ + +
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCK 403
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
EGL+++ + +++SM + K + ++ G + A ++ Q+I QGC P VT
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ ++IN C+ L +A ++ +M G +++YS+++ GK G+ +A+ L+ M
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
KG PN IY+S+ R + +V +++ ++ + D V Y VIS+ + E D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ F+ NG + + + +++ + +E +LL ++ S G + H +
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGI 643
Query: 582 -NALRDAGLQ 590
N ++ G Q
Sbjct: 644 SNCTQENGKQ 653
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 157/344 (45%), Gaps = 4/344 (1%)
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
P + + + + L GR +AL+ +M KG P +Y ++ + + +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYI-EEGLVEKTLDVVESMKNAKLKISDCIS-CAIVN 372
+ + KG D C LVL I E+G V++ + ++ + + +D +S A++
Sbjct: 167 RVLEAMHAKGCTLDTGNC-NLVLNAICEQGCVDEAVGLLRKLAFFGCE-ADIVSYNAVLK 224
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G + + ++ ++++ C P VT+ ++I CR L+ + +V +M + G
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+ Y++++ K G + A ++ +M + G +PNV YN+++ A+ ++ E+L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
EM ++ D V++ ++ + + D ++ + +G + D ++ F K
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
I+E V LL+ M S G K + Y + L AG + A+ L
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/386 (18%), Positives = 156/386 (40%), Gaps = 6/386 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T LI YL ++ ++ + + + PD + ++ + ++AN +
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L + G + ++ +N+ + G + + +M LD + +++ + +
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G ++V L + S + Y + + K G EA+ + M G +
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVIT---YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y ++ S AEEL + ++G +P L+ ++GLVE+ +++++
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Query: 354 SMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
M D IS +++G K A+++ ++++G P + Y+SI A R
Sbjct: 486 QMLVNGCS-PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+K ++F ++ V Y+++++ K A+ A M + GC PN Y
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERR 498
L+ ++ ++L E+ R
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSR 630
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 8/162 (4%)
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VVAY++MVA Y + G++ A L A + PN + + ++ + ++
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVP---PNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
EM + P Y ++ A R+ F V+ G +D +++ +
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
++E V LL+ + G + D Y++ + GL M +W
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLK-----GLCMAKRW 232
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 121/559 (21%), Positives = 228/559 (40%), Gaps = 64/559 (11%)
Query: 67 LNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRY 126
L R + PD +++ +H + K+ + A D Y+E + P T L+
Sbjct: 190 LLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGD-ACDLYSEMI-VKGISPNVVTYNALVYG 247
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIA 185
SL + K+ N+ PD T + L+ + + K K A +L V + +
Sbjct: 248 FCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPD 307
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ +NS + GY L+ + V+ M +G+ + Y +++ K ++ +LF
Sbjct: 308 VVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFE 367
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E K + + + Y L D L K+ A+ + MKE+GI D Y L+ +
Sbjct: 368 EMKYKNMIPDIVT---YTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALC 424
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
++ A+E F+ KG L +T +V
Sbjct: 425 KGGRLENAKEFFQRLLVKGY-----------------HLNVQTYNV-------------- 453
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++NG K + A+ + ++ +GC+P +T+ +II A KAEK+ EM
Sbjct: 454 ----MINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREM 509
Query: 426 QQKGFDKC-----------------------VVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+G + VV Y +++ Y ++ A ++ M
Sbjct: 510 IARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQ 569
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
G PNV Y ++D + K + + L++EM+ + + P+ V+YT++I A + +
Sbjct: 570 MGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLER 629
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ E + +G D I++ K ++E ++ Q + +G L+ ++Y + +N
Sbjct: 630 AIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMIN 689
Query: 583 ALRDAGLQMQAQWLQQNFE 601
L AGL +A LQ E
Sbjct: 690 ELCKAGLFDEALDLQXKME 708
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/480 (21%), Positives = 199/480 (41%), Gaps = 62/480 (12%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD ++S + G + + Y +Y+ A+ P T +I L + K D +
Sbjct: 306 PDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQS--GVTPNVRTYTTMIDGLCKEKMVDEAM 363
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
SL E+ K N++PD ++ + S + G
Sbjct: 364 SLFEEMKYKNMIPD----------------------------------IVTYTSLIDGLC 389
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
K H I + +KMK GI D Y +++A K G E F + +
Sbjct: 390 KNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFF---QRLLVKGYHL 446
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ Y ++ + L K+ EA+ M+ KG + D + ++IC+ E AE++
Sbjct: 447 NVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKIL 506
Query: 318 KEAEEKGMLRDPEVCLK---LVLMYIEEGLVEKTLD----------VVESMKNAK----- 359
+E +G+ +V LK +VL + + ++ + +V +K+AK
Sbjct: 507 REMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYS 566
Query: 360 ---LKISDCISC--AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
+ ++ + C +++G K++ A+ ++E++ + P VTY S+I+A C+
Sbjct: 567 MAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHH 626
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+A + EM++ G V +Y+ ++ K+GR+ A + ++ KG NV +Y +
Sbjct: 627 LERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTA 686
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+++ +A + L +ME + PD V++ +I A E D K E G
Sbjct: 687 MINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARG 746
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 196/477 (41%), Gaps = 47/477 (9%)
Query: 114 RPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
RP T ++ LV +K + +++SL + F+ PD T + L+ A
Sbjct: 58 RPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFA 117
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
++L + G + N+ + G + ++++ + G L+ Y ++
Sbjct: 118 FSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLING 177
Query: 231 YYKIGDSEKVAALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
K G+++ VA L LE S K D MY + SL K+ +A + +M K
Sbjct: 178 LCKTGETKAVARLLRKLEGHSVKPDVV-----MYNTIIHSLCKNKLLGDACDLYSEMIVK 232
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI + Y +L+ F + +K A L E + K + +P+VC T
Sbjct: 233 GISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNI--NPDVC---------------T 275
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI-PGQVTYASIIN 407
+ +++ K G A K+ ++ + CI P VTY S+I+
Sbjct: 276 FN------------------TLIDALGKE-GKMKAAKIVLAVMMKACIKPDVVTYNSLID 316
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
Y + A+ VF M Q G V Y++M+ K + +AM L +MK K P
Sbjct: 317 GYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIP 376
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
++ Y SL+D + +L + L K+M+ + + PD SYT ++ A + + +F+
Sbjct: 377 DIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFF 436
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ G ++ +M+ K E + L M+ +G D + + + AL
Sbjct: 437 QRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICAL 493
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 116/269 (43%), Gaps = 35/269 (13%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
I++ K + A +Y ++I +G P VTY +++ +C + +A + EM+ K
Sbjct: 208 TIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLK 267
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH--------- 479
+ V +++++ GK G+++ A ++A M +P+V YNSL+D +
Sbjct: 268 NINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNA 327
Query: 480 ----------GRAKNLR----------------QVEKLWKEMERRKVTPDKVSYTTVISA 513
G N+R + L++EM+ + + PD V+YT++I
Sbjct: 328 KYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDG 387
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ + + + + G D I++ K ++E + Q + +G L+
Sbjct: 388 LCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLN 447
Query: 574 ERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+ Y+ +N L A L +A L+ EG
Sbjct: 448 VQTYNVMINGLCKADLFGEAMDLKSKMEG 476
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 99/219 (45%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
I++ + Y + ++++ S G P T ++N +C + + A V + ++G
Sbjct: 69 ILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRG 128
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
+ + ++++ G I+ A++ ++ A+G + N Y +L++ + + V
Sbjct: 129 YHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVA 188
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+L +++E V PD V Y T+I + + + Y+E + G + +V F
Sbjct: 189 RLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGF 248
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ ++E LL +MK + D +++ ++AL G
Sbjct: 249 CIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEG 287
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/413 (19%), Positives = 162/413 (39%), Gaps = 62/413 (15%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + + + + G+ K+ E A + E K P+ T LI L ++ + +
Sbjct: 341 PNVRTYTTMIDGLCKEKMVDE-AMSLFEEMK-YKNMIPDIVTYTSLIDGLCKNHHLERAI 398
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
+L + K + PD ++ + L+ + + + + A Q + G + + +N + G
Sbjct: 399 ALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGL 458
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL---- 252
K ++ + + KM+ G + D+ + I+ A ++ +++K + E +R L
Sbjct: 459 CKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEAR 518
Query: 253 ---------------------DSTPFSTHM------------------------------ 261
D + T M
Sbjct: 519 KVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQC 578
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y I+ D L K EA+ F +MK K + + Y SLI + ++ A L KE +
Sbjct: 579 YTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMK 638
Query: 322 EKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
E G+ P+V +L+ + G +E ++ + + ++ + A++N K
Sbjct: 639 EHGI--QPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGL 696
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
+ A+ + ++ +GC+P VT+ II A KAEK+ EM +G K
Sbjct: 697 FDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLMK 749
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 97/251 (38%), Gaps = 39/251 (15%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + + G + + Y +Y+ A+ P ++I L + K D +
Sbjct: 539 PDVVTYGTLMDGYFLVNELKHAKYVFYSMAQM--GVTPNVQCYTIMIDGLCKKKTVDEAM 596
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
SL E+ K N+ P+ T + L+ + + + A IALL
Sbjct: 597 SLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERA------------IALL---------- 634
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
++MK GI D Y +++ K G E +F + +
Sbjct: 635 ------------KEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIF---QRLLVKGYHL 679
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ +Y + + L K+G EAL M++KG + D + +I + E AE++
Sbjct: 680 NVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKIL 739
Query: 318 KEAEEKGMLRD 328
E +G++++
Sbjct: 740 XEMIARGLMKE 750
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 162/367 (44%), Gaps = 40/367 (10%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA--FNSAMGGYNKLHMYYS 204
+ PD +T + L++ + + + A + +T GE+A A +N+ +GGY +
Sbjct: 178 GIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDV 237
Query: 205 TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKI 264
+ E M GI + Y +M A + + A+ E + F+ Y I
Sbjct: 238 ALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFT---YNI 294
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L + K G +AL+ F +M +KG+ Y SLI F+ +V+ + LF A +KG
Sbjct: 295 LINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKG 354
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ D V+MY NA + S C G R Y
Sbjct: 355 IRPD-------VVMY-----------------NALIN-SHC------TGGDMERAYEIMA 383
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
++ ++ I P +TY +++ +C + +A + EM ++G +V+Y+++++ Y
Sbjct: 384 EMEKKRIP----PDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGY 439
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
G I+DA+ + +M KG P + YN+L+ + + E L KEM + +TPD
Sbjct: 440 SMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDD 499
Query: 505 VSYTTVI 511
+Y ++I
Sbjct: 500 STYISLI 506
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 141/299 (47%), Gaps = 2/299 (0%)
Query: 273 GRAFEALKFFRDMKEKG-ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
GR AL+ R+M+E+G I D YA+LI + I ++ A ++F E KG + V
Sbjct: 161 GRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAV 220
Query: 332 CLK-LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
L+ Y + G ++ L E M + ++ +++ A V E++
Sbjct: 221 MYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEM 280
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
G P TY +IN YC+ KA +VF EM QKG V Y+S++ ++ + G++
Sbjct: 281 QKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQV 340
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
++ L KG P+V +YN+L++ H ++ + ++ EME++++ PD ++Y T+
Sbjct: 341 QETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTL 400
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ + D +E G D ++ +S I++ +++ +M +G
Sbjct: 401 MRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKG 459
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 157/353 (44%), Gaps = 3/353 (0%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKS-AGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+ +N+ + G+ + + V +M+ GI D Y ++ + KIG E +F
Sbjct: 148 VTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFD 207
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E + K + P S MY L G+ AL++ DM ++GI + Y L+ +
Sbjct: 208 EMLT-KGEVAP-SAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALF 265
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
A + +E ++ G D L+ Y +EG +K L+V E M ++ +
Sbjct: 266 MDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAV 325
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
+++ FS++ +++ + +G P V Y ++IN++C +A ++ EM
Sbjct: 326 TYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEM 385
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
++K + Y++++ + GR+ +A L+ +M +G +P++ YN+L+ + ++
Sbjct: 386 EKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDI 445
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ ++ EM + P ++Y +I + R+ D E G D
Sbjct: 446 KDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPD 498
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 162/333 (48%), Gaps = 3/333 (0%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
A+++ + Y + + + M +AG+ ++ C ++EA+ + G +++++ F
Sbjct: 683 AYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRL 742
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
++ +P ++ + ++ + ++G EA +R MKE G ++ +L+ ++
Sbjct: 743 P--EMGISP-NSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRE 799
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
T AEEL K+ ++ G+ D ++ ++ +Y + G V + M+
Sbjct: 800 TVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTF 859
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++ +S+ + A + ++I G P TY ++I+AY R+ Y AE VF + +
Sbjct: 860 NTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAE 919
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G AY+ M+ +Y K G R ++ +MK G EP++ + LMD +G+ +
Sbjct: 920 TGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGK 979
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
E++ + + ++PD + YT++I+++ +++
Sbjct: 980 AEEVLETLPEIGMSPDAIHYTSIINSHLNNKDY 1012
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 163/331 (49%), Gaps = 15/331 (4%)
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ Y KL ++ + +V+ ++ G ++ Y ++ AY + G+ E+ +R L
Sbjct: 653 IASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERA--------TRAL 704
Query: 253 DS------TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
D+ P +T +L ++ G++G+A E +FF+ + E GI + + + +F+
Sbjct: 705 DNMVAAGLQPNATCANYVL-EAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSR 763
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
++ A ++++ +E G +V L+ +Y E + ++V+ +K A L++ I
Sbjct: 764 NGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDI 823
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
+++ +SK Y A V++ + GC P T+ ++I Y R + +A+ + EM
Sbjct: 824 YNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMI 883
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+ G + Y+++++ YG+ DA + + GC+P+ YN +++++ +A R
Sbjct: 884 KTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHR 943
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
++E++ ++M+ P + ++ +Y +
Sbjct: 944 KIEEIIEQMKVDGFEPSLTTIHMLMDSYGKG 974
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/445 (20%), Positives = 194/445 (43%), Gaps = 6/445 (1%)
Query: 152 AHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM-GGYNKLHMYYSTILVYE 210
AH RL +A +F A ++ T G++ + F + Y++ M + +
Sbjct: 541 AHLYKRLAVMLAKAGRFSEAEEEMRTSQTYGQVQVSDFLKVLVASYDRAGMQDEALARFL 600
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
M + G+ +D+ + Y + G + L ++C D + H+ I S G
Sbjct: 601 DMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCL-HAFDVKDSAMHVAIIA--SYG 657
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
K A FRD+++ G + S Y++L+ ++A + A G L+
Sbjct: 658 KLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAG-LQPNA 716
Query: 331 VCLKLVL-MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
C VL + G ++ + + + + + I + FS+ A +Y Q
Sbjct: 717 TCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQ 776
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ G P + +++ Y R + AE++ ++++ G + + Y+ M+++Y K G
Sbjct: 777 MKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGS 836
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
R+A + M+ GC P+ +N+L+ ++ R + +++ + L +EM + P+ +YTT
Sbjct: 837 YRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTT 896
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ISAY R + ++ + G D +M+ V+ K + ++ ++++ MK +G
Sbjct: 897 LISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDG 956
Query: 570 TKLDERLYHSAMNALRDAGLQMQAQ 594
+ H M++ G +A+
Sbjct: 957 FEPSLTTIHMLMDSYGKGGATGKAE 981
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 126/275 (45%), Gaps = 4/275 (1%)
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+P + A ++ + LA+ELF AE + +V L+ +Y G ++
Sbjct: 90 NPRMLAVMLSVLGRANQPGLAQELFDRAE-SSIGNCVQVYNSLMSVYARHGDWNSVQQLL 148
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWA--AVKVYEQLISQGCIPGQVTYASIINAYC 410
M++ + D ++ IV R G A + + + + G P +TY ++I+A
Sbjct: 149 CRMQDRGCR-PDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACS 207
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
S A +F EMQ++G D + Y++M+++YG+ GR+ A + M+ +G P+
Sbjct: 208 LNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAV 267
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YNS++ R + +VE++ M + + D+++Y T+I Y +A + Y +
Sbjct: 268 TYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQM 327
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+ G D +++ K + E + +DM
Sbjct: 328 KEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDM 362
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/442 (18%), Positives = 186/442 (42%), Gaps = 44/442 (9%)
Query: 128 VQSKKWDSIVSLSEDFKIYN-VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL 186
V + W + L E + P+ + +++ RA + +A L + +
Sbjct: 66 VANTSWQRALELYECLNVARWYAPNPRMLAVMLSVLGRANQPGLAQELFDRAESSIGNCV 125
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+NS M Y + + S + +M+ G D + +++A + G E +A+ L+
Sbjct: 126 QVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQ 185
Query: 247 ---CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
+ D+ ++T L + + R +A+ F +M+ +G D Y ++I
Sbjct: 186 DVYAAGLRPDTITYNT-----LISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISV 240
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ V+ A +F+ +E+G D ++ + +G +E+ + M++A+
Sbjct: 241 YGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDAR---- 296
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
C ++TY ++I+ Y + ++ KAE++++
Sbjct: 297 -------------------------------CSSDEITYNTMIHMYGKAGMHRKAEELYV 325
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+M+++G V ++ ++ GK G + +A + M P + +++++ + +A
Sbjct: 326 QMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKAD 385
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
E + M R V PD ++Y+ ++ + +A + C+ Y +G + ++
Sbjct: 386 MFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCIILYKAMVGSGLKPELSVYA 445
Query: 544 IMVGVFSKLSQIEELVKLLQDM 565
IMV VF + S + E+ L ++M
Sbjct: 446 IMVRVFYQKSSVAEIENLSKEM 467
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 151/363 (41%), Gaps = 51/363 (14%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ M ++ LG++ + A + F D E I +Y SL+ +A + ++L
Sbjct: 90 NPRMLAVMLSVLGRANQPGLAQELF-DRAESSIGNCVQVYNSLMSVYARHGDWNSVQQLL 148
Query: 318 KEAEEKGMLRDPEVCLKLVLMY-----IEEGLVEKTLDVV--ESMKNAKLKISDCIS-CA 369
+++G R V +V+ ++EGL L V ++ + + IS C+
Sbjct: 149 CRMQDRG-CRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACS 207
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+ N S A+ ++E++ QGC P TY ++I+ Y R A +F MQ++G
Sbjct: 208 LNNRLSD------AILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQG 261
Query: 430 FDKCVVAYSS-----------------------------------MVAMYGKTGRIRDAM 454
F V Y+S M+ MYGK G R A
Sbjct: 262 FTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAE 321
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L +MK +G P+ + L+D G+A + + ++++M + +V P +++ +I AY
Sbjct: 322 ELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAY 381
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+A F Y+ G D +M+ VF K E+ + L + M G K +
Sbjct: 382 AKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCIILYKAMVGSGLKPEL 441
Query: 575 RLY 577
+Y
Sbjct: 442 SVY 444
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 134/325 (41%), Gaps = 6/325 (1%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF--ASITEVKLAEE 315
+ H+YK L L K+GR EA + R + G ++ L+ S+ A + + LA
Sbjct: 540 AAHLYKRLAVMLAKAGRFSEAEEEMRTSQTYGQVQVSDFLKVLVASYDRAGMQDEALAR- 598
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
F + +G+ D EV V+ Y +G +++ +A + AI+ +
Sbjct: 599 -FLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFDVKDSAMHVAIIASYG 657
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K + + A V+ L G Y+++++AY + +A + M G
Sbjct: 658 KLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAT 717
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+ ++ +G+ G+ ++ ++ G PN + + R NL + ++++M
Sbjct: 718 CANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQM 777
Query: 496 ERRKVTPDKVSYTTVISAYNRAR-EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+ +P + +++ Y+R E D + + + G +D I M+ ++SKL
Sbjct: 778 KEAGFSPSIQVFKALLALYSRETVEID-AEELVKDIKKAGLELDIDIYNHMISLYSKLGS 836
Query: 555 IEELVKLLQDMKSEGTKLDERLYHS 579
+ + M+ G D +++
Sbjct: 837 YRNAALVFKGMQEIGCSPDATTFNT 861
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD-AMWLVAKM 460
Y S+++ Y R ++ +++ MQ +G +V ++ ++ + G A L+ +
Sbjct: 128 YNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDV 187
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
A G P+ YN+L+ L +++EM+R+ PD +Y +IS Y RA
Sbjct: 188 YAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRV 247
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ + + G D ++ F++ +IEE+ ++ M+ DE Y++
Sbjct: 248 EAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTM 307
Query: 581 MNALRDAGLQMQAQ--WLQQNFEG 602
++ AG+ +A+ ++Q EG
Sbjct: 308 IHMYGKAGMHRKAEELYVQMKEEG 331
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 97/459 (21%), Positives = 193/459 (42%), Gaps = 46/459 (10%)
Query: 78 PDAKKFDSFL----HGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
PD F+ + G +++ L D Y RP+ T LI + +
Sbjct: 158 PDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAG-----LRPDTITYNTLISACSLNNRL 212
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM 193
+ + E+ + PD T + +++ RA + + A+++ ++ G F
Sbjct: 213 SDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQG------FTPDA 266
Query: 194 GGYNK-LHMYYSTILVYEKMKSAGIVLDSGC------YCQIMEAYYKIGDSEKVAALFLE 246
YN LH + + E + G++ D+ C Y ++ Y K G K L+++
Sbjct: 267 VTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQ 326
Query: 247 CK--SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
K R DS F+ +L D+LGK+G EA F DM + + ++++IC++
Sbjct: 327 MKEEGRCPDSVTFT-----VLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAY 381
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
A AE + G+ D ++ ++ + G+ EK + + ++M + LK
Sbjct: 382 AKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCIILYKAMVGSGLKPEL 441
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+ +V F ++ ++V E L S+ + + A++ + + Y++A V
Sbjct: 442 SVYAIMVRVFYQK----SSVAEIENL-SKEMVQSSASLAALSSTLAKGGFYAEAAVVLKI 496
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV--WIYNSLMDMHGRA 482
+G V + ++ + +G++ DA LV + + EP+V +Y L M +A
Sbjct: 497 SFAQGVAVKVETLNDVLGAFEASGKLSDARDLVHAVSS--IEPSVAAHLYKRLAVMLAKA 554
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYT----TVISAYNRA 517
+ E +EM R T +V + ++++Y+RA
Sbjct: 555 GRFSEAE---EEM-RTSQTYGQVQVSDFLKVLVASYDRA 589
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/498 (19%), Positives = 209/498 (41%), Gaps = 32/498 (6%)
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAF-NSAMGG 195
+SL + + +P T + ++ +CV+ A L + G+ LA S M G
Sbjct: 95 LSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKG 154
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
Y S +++ ++ +G+V + Y +++ K G+ EK + E K++ + S+
Sbjct: 155 YCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSS 214
Query: 256 PFSTH-------------------------------MYKILCDSLGKSGRAFEALKFFRD 284
+S + + L L K G+ EA + +
Sbjct: 215 VYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDE 274
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
+ KGI + Y ++I + A +++KE + G + L+ Y ++G
Sbjct: 275 VIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGD 334
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+E + MK+A + +D I+ G K + ++ + +SQG +P + Y +
Sbjct: 335 IENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNT 394
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
II+ + + + A V+ EM + G V Y+S++ + K I A+ L+ MK KG
Sbjct: 395 IIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKG 454
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+ ++ Y +L+D + ++++ +L E+ ++P++ Y ++I+ + + +
Sbjct: 455 LKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAI 514
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
Y + G D ++ K ++ + +M S+G D+R + +N L
Sbjct: 515 DLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGL 574
Query: 585 RDAGLQMQAQWLQQNFEG 602
+ G A+ + ++ G
Sbjct: 575 CNKGQFENARKILEDMNG 592
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 200/473 (42%), Gaps = 42/473 (8%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VP+ + + G K+ ++ A+++Y+E K R +L ++ ++ + W +
Sbjct: 177 VPNKVTYSVLIDGCCKNGNIEK-AFEFYSEMKT-KGIRSSVYSLNSILEGYLKCQSWQNA 234
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
++ D + + L + T + L++ + K A L I G ++++N+ + G
Sbjct: 235 FTMFND-ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILG 293
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ + + VY++M G ++ + +M+ Y+K GD E ++F K +
Sbjct: 294 HCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI--L 351
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P T + I+ L K+GR+FE F +G + Y ++I F + LA
Sbjct: 352 PTDTTL-GIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 410
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+++E E G+ L+ + + ++ L ++ MK LK+ +++GF
Sbjct: 411 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 470
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY----------------------CRIA 413
KRR +A ++ +L G P + Y S+I + C +
Sbjct: 471 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLK 530
Query: 414 LYSK-------------AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
Y+ A + EM KG A++ ++ G+ +A ++ M
Sbjct: 531 TYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDM 590
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
K P+V IYN+L+ H + NL++ +L EM R + PD ++Y +++
Sbjct: 591 NGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 137/330 (41%), Gaps = 1/330 (0%)
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
K G EA + F K +G+ D Y+ + A L +E G +
Sbjct: 52 KEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 111
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
++ ++EG V + L + + M N ++ ++ +++ G+ + +A+ + ++
Sbjct: 112 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 171
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
G +P +VTY+ +I+ C+ KA + + EM+ KG V + +S++ Y K
Sbjct: 172 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 231
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
++A + G NV+ +N+L+ + + + LW E+ + ++P+ VSY +
Sbjct: 232 QNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 290
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
I + R + K Y E NG + I++ + K IE + MK
Sbjct: 291 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 350
Query: 571 KLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ + L AG + + L F
Sbjct: 351 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKF 380
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 115/336 (34%), Gaps = 76/336 (22%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
Q VP +++ + G +K+ LA + Y E ++ P T LI +
Sbjct: 383 QGFVPTCMPYNTIIDGFIKEGNIN-LASNVYREMCEVG-ITPSTVTYTSLIDGFCKGNNI 440
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
D + L D K + D L+ + R K A+ LL G +NS
Sbjct: 441 DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 500
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G+ ++ I +Y+KM + GI
Sbjct: 501 ITGFKNMNNVEEAIDLYKKMVNEGI----------------------------------- 525
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
P Y L D L KSGR A +M KGIL D + LI + + +
Sbjct: 526 ---PCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFEN 582
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A ++ ++ K M+ P V L+ TL +
Sbjct: 583 ARKILEDMNGKNMI--PSV------------LIYNTL---------------------IA 607
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
G K A +++++++ +G +P +TY ++N
Sbjct: 608 GHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/483 (21%), Positives = 201/483 (41%), Gaps = 39/483 (8%)
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
+ L ++R L +K +++ K P A + ++ + +++ + L
Sbjct: 127 TELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNE 186
Query: 178 FITDGEI--ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG 235
T+G + +++ + + KL S I + +MK G+ + Y ++ ++K
Sbjct: 187 MSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFN 246
Query: 236 DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
D+ +LF E + + F+ Y L LGK+GR EA FF +M+ +G D
Sbjct: 247 DAHGALSLFEEMRHQYCRPDVFT---YTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTV 303
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
++I + A +LF+E E LR C+ V+ Y +++++
Sbjct: 304 FMNNMINFLGKAGRLDDAMKLFQEMET---LR----CIPSVVTYN---------TIIKAL 347
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+K + S+ S W +E++ G P TY+ +I+ +C+
Sbjct: 348 FESKSRASEVPS-------------W-----FERMKESGISPSSFTYSILIDGFCKTNRM 389
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
KA + EM +KGF C AY S++ GK R A L ++K + +Y +
Sbjct: 390 EKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVM 449
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ G+A L ++ EM + PD +Y ++S R D + + +G
Sbjct: 450 IKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGC 509
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
+ D I++ +K +++L +MK + D Y++ + AL AG+ +A
Sbjct: 510 IPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASK 569
Query: 596 LQQ 598
L +
Sbjct: 570 LMK 572
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 155/370 (41%), Gaps = 7/370 (1%)
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
G EKV L+ E S + P T Y L + K GR A++ +MKE G+
Sbjct: 175 GQYEKVHQLYNEM-STEGHCFP-DTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTT 232
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
IY LI F + A LF+E + D +L+ + G +++
Sbjct: 233 KIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCE 292
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
M+ + ++N K A+K+++++ + CIP VTY +II A
Sbjct: 293 MQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKAL--FES 350
Query: 415 YSKAEKV---FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
S+A +V F M++ G YS ++ + KT R+ AM L+ +M KG P
Sbjct: 351 KSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAA 410
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y SL+D G+AK +L++E++ + Y +I +A D + ++E
Sbjct: 411 YCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMN 470
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
G D ++ ++ ++E + ++ M+ G D Y+ +N L G
Sbjct: 471 KLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPH 530
Query: 592 QAQWLQQNFE 601
+A + N +
Sbjct: 531 RAMEMLSNMK 540
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 6/192 (3%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA---YSSMVAMYGKTGRIRDAMWLV 457
TY ++I+ + Y + K+ EM + CVV S +V M G +R A+ +
Sbjct: 92 TYMALIHCLEVVEQYGEMWKMIQEMVRNPI--CVVTPTELSDVVRMLGNAKMVRQAITIF 149
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR-KVTPDKVSYTTVISAYNR 516
++K + C+P YNS++ M +V +L+ EM PD V+Y+ +ISA+ +
Sbjct: 150 YQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCK 209
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
D ++ NE + G I +++ +F K + + L ++M+ + + D
Sbjct: 210 LGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFT 269
Query: 577 YHSAMNALRDAG 588
Y + L AG
Sbjct: 270 YTELIRGLGKAG 281
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 36/209 (17%)
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM----------- 443
C+ + ++ + +A +F +++ + AY+SM+ M
Sbjct: 122 CVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVH 181
Query: 444 -------------------------YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+ K GR A+ L+ +MK G +P IY L+ +
Sbjct: 182 QLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIAL 241
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ + L++EM + PD +YT +I +A D F+ E + G D
Sbjct: 242 FFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPD 301
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
M+ K ++++ +KL Q+M++
Sbjct: 302 TVFMNNMINFLGKAGRLDDAMKLFQEMET 330
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 150/342 (43%), Gaps = 1/342 (0%)
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
TP MY + D + K G A + M G+ + Y +++ S K AE
Sbjct: 283 TP-DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
EL E +K D LV + + GLV++ ++++E M + ++NGF
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K AV + + + S GC P V+Y ++ C + AE++ +M Q+G
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V +++++ K G + A+ L+ +M GC P++ Y++++D G+A + +L
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M + ++P+ + Y+++ A +R + ++ ++ + D + ++ K +
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + M S G +E Y + L GL +AQ L
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQEL 623
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 185/430 (43%), Gaps = 4/430 (0%)
Query: 162 CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
C+ R + + ++ D ++ FN+ +G + ++ V +M G D
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y I++ K G E + S L + Y + L + R EA +
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKP---NVVCYNTVLKGLCSAERWKEAEEL 343
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+M +K D + L+ F V EL ++ G + D ++ + +
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCK 403
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
EGL+++ + +++SM + K + ++ G + A ++ Q+I QGC P VT
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ ++IN C+ L +A ++ +M G +++YS+++ GK G+ +A+ L+ M
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
KG PN IY+S+ R + +V +++ ++ + D V Y VIS+ + E D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ F+ NG + + + +++ + +E +LL ++ S G + H +
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGI 643
Query: 582 -NALRDAGLQ 590
N ++ G Q
Sbjct: 644 SNCTQENGKQ 653
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 157/343 (45%), Gaps = 4/343 (1%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P + + + + L GR +AL+ +M KG P +Y ++ + + +
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYI-EEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNG 373
+ + KG D C LVL I E+G V++ + ++ + + +D +S A++ G
Sbjct: 168 VLEAMHAKGCTLDTGNC-NLVLNAICEQGCVDEAVGLLRKLAFFGCE-ADIVSYNAVLKG 225
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+ + ++ ++++ C P VT+ ++I CR L+ + +V +M + G
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ Y++++ K G + A ++ +M + G +PNV YN+++ A+ ++ E+L
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
EM ++ D V++ ++ + + D ++ + +G + D ++ F K
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
I+E V LL+ M S G K + Y + L AG + A+ L
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/386 (18%), Positives = 156/386 (40%), Gaps = 6/386 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T LI YL ++ ++ + + + PD + ++ + ++AN +
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L + G + ++ +N+ + G + + +M LD + +++ + +
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G ++V L + S + Y + + K G EA+ + M G +
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVIT---YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y ++ S AEEL + ++G +P L+ ++GLVE+ +++++
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Query: 354 SMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
M D IS +++G K A+++ ++++G P + Y+SI A R
Sbjct: 486 QMLVNGCS-PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+K ++F ++ V Y+++++ K A+ A M + GC PN Y
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERR 498
L+ ++ ++L E+ R
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSR 630
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 8/162 (4%)
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VVAY++MVA Y + G++ A L A + PN + + ++ + ++
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVP---PNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
EM + P Y ++ A R+ F V+ G +D +++ +
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
++E V LL+ + G + D Y++ + GL M +W
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLK-----GLCMAKRW 232
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 189/418 (45%), Gaps = 10/418 (2%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGI---VLDSGCYCQ 226
A L++ DG + + ++S M GY + ++V+E++K G ++ GC
Sbjct: 375 AEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGC--- 431
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
++ Y K+G K A+ E +S + + Y +L + A F DM
Sbjct: 432 LINLYVKVGKVPKAIAISKEMESHGIKH---NNKTYSMLINGFIHLHDFANAFSIFEDMI 488
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
+ G+ D +IY L+ +F + + A +F+ +++ M ++ + G ++
Sbjct: 489 KSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMK 548
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ D ++ M+ + + A+++G ++ AV V +++ G P + TY I+
Sbjct: 549 RAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIM 608
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
Y KA + F ++++ G V Y +++ K+GR++ A+ + +M +
Sbjct: 609 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 668
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
N +IYN L+D R ++ + L K+M+ + P+ ++T+ I+A +A +
Sbjct: 669 RNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENV 728
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
E G + ++ ++++S + +K ++MKS G K DE YH + +L
Sbjct: 729 IQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSL 786
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 191/427 (44%), Gaps = 52/427 (12%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
E+MKS GI + Y ++ Y K D++ LF E K+ KLD+ + +Y + +
Sbjct: 310 EEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKT-KLDN--LNGIIYSNIIHAH 366
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
+SG A + R+M+E GI +Y S++ + + + K +F+ +E G P
Sbjct: 367 CQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGF--KP 424
Query: 330 EV----CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ CL + +Y++ G V K + + + M++ +K ++ ++NGF + A
Sbjct: 425 TIISYGCL--INLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFS 482
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++E +I G P + Y ++ A+C++ +A ++F MQ++ + ++ +
Sbjct: 483 IFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFA 542
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK---LWKEMERRKVTP 502
G ++ A + M+ GC P V YN+L +HG + QVEK + +M + P
Sbjct: 543 VAGDMKRAFDTLDLMRRSGCAPTVMTYNAL--IHGLVRK-HQVEKAVSVLDKMSIAGIAP 599
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNG------------------GVIDRAIA-- 542
++ +YT ++ Y + + +++ + + +G G + A+A
Sbjct: 600 NEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVT 659
Query: 543 ---------------GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
I++ +++ + E LL+ MK +G + + S +NA A
Sbjct: 660 REMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKA 719
Query: 588 GLQMQAQ 594
G +A+
Sbjct: 720 GDMQRAE 726
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 169/386 (43%), Gaps = 4/386 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+E M++ GI ++ + ++ AY GD + E KS ++ T + Y IL
Sbjct: 273 TFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVT---YSILIS 329
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ A A F++ K K + IY+++I + + AEEL +E EE G+
Sbjct: 330 GYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDA 389
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+V ++ Y +K L V E +K K + ++N + K A+ +
Sbjct: 390 PIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAIS 449
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++ S G TY+ +IN + + ++ A +F +M + G Y+ +V + K
Sbjct: 450 KEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKM 509
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G + A+ + +M+ + +P+ + +++ A ++++ M R P ++Y
Sbjct: 510 GNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTY 569
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+I R + + V ++ + G + I++ ++ I + + +K
Sbjct: 570 NALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKE 629
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQA 593
G KLD +Y + + A +G +MQ+
Sbjct: 630 SGLKLDVYIYETLLRACCKSG-RMQS 654
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 135/292 (46%)
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
+ ++ +A + A F+ +G+ + V LV Y G + L VE MK
Sbjct: 254 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMK 313
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ ++++ +++G+ K +A ++++ ++ + Y++II+A+C+
Sbjct: 314 SEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMD 373
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+AE++ EM++ G D + Y SM+ Y + + + ++K G +P + Y L+
Sbjct: 374 RAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLI 433
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+++ + + + + KEME + + +Y+ +I+ + +F + + +G
Sbjct: 434 NLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQ 493
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
DRAI ++V F K+ ++ +++ + M+ E + R + + AG
Sbjct: 494 PDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAG 545
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/397 (19%), Positives = 169/397 (42%), Gaps = 10/397 (2%)
Query: 83 FDSFLHG--MLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLS 140
+ S +HG +++D + + ++ E F+P + LI V+ K +++S
Sbjct: 394 YHSMMHGYTVVQDEKKCLIVFERLKECG----FKPTIISYGCLINLYVKVGKVPKAIAIS 449
Query: 141 EDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKL 199
++ + + + + T S L+ + F A ++ + I G + +N + + K+
Sbjct: 450 KEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKM 509
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
I ++E+M+ + + + I+E + GD ++ F + +
Sbjct: 510 GNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRA---FDTLDLMRRSGCAPTV 566
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
Y L L + + +A+ M GI + Y ++ +A+ ++ A E F +
Sbjct: 567 MTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTK 626
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+E G+ D + L+ + G ++ L V M K+ + I +++G+++R
Sbjct: 627 IKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGD 686
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
W A + +Q+ G P T+ S INA C+ +AE V EM G V +++
Sbjct: 687 VWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTT 746
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
++ + + A+ +MK+ G +P+ Y+ L+
Sbjct: 747 LIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLV 783
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/247 (18%), Positives = 101/247 (40%), Gaps = 43/247 (17%)
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
S+ + A V +E++ P + + ++ Y + A F M+ +G +
Sbjct: 231 SRPEDWQAVVSAFERIPK----PSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNA 286
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
++S+V Y G +R A+ V +MK++G E V Y+ L+ +G+ + + + L+KE
Sbjct: 287 FVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKE 346
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA------------ 542
+ + + + Y+ +I A+ ++ D + E +G ID I
Sbjct: 347 AKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDG--IDAPIDVYHSMMHGYTVV 404
Query: 543 -------------------------GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
G ++ ++ K+ ++ + + + ++M+S G K + + Y
Sbjct: 405 QDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTY 464
Query: 578 HSAMNAL 584
+N
Sbjct: 465 SMLINGF 471
>gi|297805706|ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316573|gb|EFH46996.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 680
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 174/362 (48%), Gaps = 8/362 (2%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + R L ++ Y L S GK G AL + + M++ + D +Y++LI
Sbjct: 178 GLFDEMRQRALAPDRYT---YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLI 234
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A +F + G+ D ++ +Y + L ++ +++ M A +
Sbjct: 235 ELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVS 294
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ +++ + + + A+ V+ ++ C T +I+ Y ++ + +A+++
Sbjct: 295 PNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRL 354
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F +++ + VV+Y++++ +YG+ +A+ L M+ K E NV YN+++ ++G+
Sbjct: 355 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 414
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L +EM+ R + P+ ++Y+T+IS + +A + D + + R +G ID+ +
Sbjct: 415 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVL 474
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL-QQNF 600
M+ + ++ + +LL ++K D +A+ L AG +A W+ +Q F
Sbjct: 475 YQTMIVAYERVGLMGHAKRLLHELKLP----DNIPRETAITILAKAGSTEEATWVFRQAF 530
Query: 601 EG 602
E
Sbjct: 531 ES 532
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/505 (19%), Positives = 220/505 (43%), Gaps = 18/505 (3%)
Query: 70 DSHHQTA--VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYL 127
D H+ A P ++ L +L+ Q +A+ ++E ++ P++ T LI
Sbjct: 145 DWVHEEAKYTPSVFAYNVVLRNVLRAKQFG-IAHGLFDEMRQRA-LAPDRYTYSTLITSF 202
Query: 128 VQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS----CVRARKFKIANTLLQVFITDGE 183
+ +DS +S + + V D S L+ C ++ I + L + IT
Sbjct: 203 GKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPD- 261
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
L+A+NS + Y K ++ ++ ++M AG+ ++ Y ++ Y + + ++
Sbjct: 262 --LVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSV 319
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
F E K + P I+ D G+ EA + F +++ I + Y +++
Sbjct: 320 FAEMKEV---NCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRV 376
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++ +Y + EK ++V+ M++ ++ +
Sbjct: 377 YGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPN 436
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R+ L A+++
Sbjct: 437 AITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLH 496
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E++ + + + + K G +A W+ + G ++ ++ +++++ R +
Sbjct: 497 ELKLPD----NIPRETAITILAKAGSTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQ 552
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
V +++++M PD + V++AY + REF+ Y E + G V +
Sbjct: 553 RYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHF 612
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSE 568
M+ ++S E + L + ++S+
Sbjct: 613 QMLSLYSSKKDFEMVESLFERLESD 637
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/436 (17%), Positives = 198/436 (45%), Gaps = 12/436 (2%)
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+S+ K + PD + ++ +A+ FK A L++ G +++++ +
Sbjct: 247 ISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSV 306
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM-EAYYKIGDSEKVAALFLECKSRKLDS 254
Y + H + + V+ +MK LD C IM + Y ++ ++ LF RK+D
Sbjct: 307 YVENHKFLEALSVFAEMKEVNCPLDLTT-CNIMIDVYGQLDMVKEADRLFWSL--RKMDI 363
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
P + Y + G++ EA+ FR M+ K I ++ Y ++I + E + A
Sbjct: 364 EP-NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 422
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
L +E + +G+ + ++ ++ + G +++ + + ++++ ++I + ++ +
Sbjct: 423 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 482
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+R G K +L+ + +P + + I + +A VF + + G K +
Sbjct: 483 -ERVGLMGHAK---RLLHELKLPDNIPRETAITILAKAGSTEEATWVFRQAFESGEVKDI 538
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ M+ +Y + R + + + KM+ G P+ +++ +G+ + + + +++E
Sbjct: 539 SVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYRE 598
Query: 495 MERRK-VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
M+ V PD+V + ++S Y+ ++F+M + + V + + ++ ++ +
Sbjct: 599 MQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFERLESDPNVNSKELHLVVAALYERAD 657
Query: 554 QIEELVKLLQDMKSEG 569
++ + +++ M+ G
Sbjct: 658 KLNDASRVMNRMRERG 673
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 146/294 (49%), Gaps = 8/294 (2%)
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
+F+AL+ R + L+ L+ ASI + + +ELF +D ++ ++
Sbjct: 72 SFQALRKHRRYQRSAFLDHNVDMDELL---ASIHQTQNEKELFSLL---STYKDRQLSIR 125
Query: 335 -LVLMYIEEGLVEKTLDVVESM-KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
+V + E +++L +++ + + AK S ++ + + + A +++++
Sbjct: 126 FMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQ 185
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
+ P + TY+++I ++ + ++ A +M+Q +V YS+++ + +
Sbjct: 186 RALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSK 245
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A+ + +++K G P++ YNS+++++G+AK ++ L KEM V+P+ VSY+T++S
Sbjct: 246 AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLS 305
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y +F + + E + +D IM+ V+ +L ++E +L ++
Sbjct: 306 VYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLR 359
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/422 (19%), Positives = 164/422 (38%), Gaps = 45/422 (10%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + L+ V++ K+ +S+ + K N D TC+ ++ + K A+ L
Sbjct: 295 PNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRL 354
Query: 175 L-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ D E ++++N+ + Y + ++ I ++ M+ I + Y +++ Y K
Sbjct: 355 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 414
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E +SR ++ + Y + GK+G+ A F+ ++ G+ D
Sbjct: 415 TMEHEKATNLVQEMQSRGIEPNAIT---YSTIISIWGKAGKLDRAATLFQKLRSSGVEID 471
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+Y ++I ++ + + A+ L E
Sbjct: 472 QVLYQTMIVAYERVGLMGHAKRLLHE---------------------------------- 497
Query: 354 SMKNAKLKISDCISC-AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
LK+ D I + +K A V+ Q G + + +IN Y R
Sbjct: 498 ------LKLPDNIPRETAITILAKAGSTEEATWVFRQAFESGEVKDISVFGCMINLYSRN 551
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
Y +VF +M+ G+ A + ++ YGK A + +M+ +GC ++
Sbjct: 552 QRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVH 611
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
++ ++ K+ VE L++ +E K + V + Y RA + + + N R
Sbjct: 612 FQMLSLYSSKKDFEMVESLFERLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRE 671
Query: 533 NG 534
G
Sbjct: 672 RG 673
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 97/225 (43%), Gaps = 7/225 (3%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+++K++S+G+ +D Y ++ AY ++G L E K D+ P T +
Sbjct: 459 LFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLP--DNIPRETAI-----T 511
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L K+G EA FR E G ++D S++ +I ++ E+F++ G
Sbjct: 512 ILAKAGSTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFP 571
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D ++ Y ++ EK V M+ D + +++ +S ++ + ++
Sbjct: 572 DSNAIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLF 631
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
E+L S + + + + Y R + A +V M+++G K
Sbjct: 632 ERLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILK 676
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 62/130 (47%)
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+V+ YN ++ RAK L+ EM +R + PD+ +Y+T+I+++ + FD + +
Sbjct: 155 PSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 214
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ + D + ++ + +L + + + +K G D Y+S +N
Sbjct: 215 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 274
Query: 587 AGLQMQAQWL 596
A L +A+ L
Sbjct: 275 AKLFKEARVL 284
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 185/410 (45%), Gaps = 44/410 (10%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYS 204
Y +LPD ++ + L+ + A + A L G + ++ + G++ L +
Sbjct: 214 YGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSG 273
Query: 205 TILVYEKM-KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH--M 261
+ +KM G+ D Y ++ + ++G+ E+ L R L S+ F + +
Sbjct: 274 AREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRL-----RRDLLSSGFQLNVIL 328
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L SL K G+ EAL+ +M+ + D Y+ LI +V+ A +L+KE
Sbjct: 329 YSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMC 388
Query: 322 -------------------EKGMLRD--------------PEVCLKLVLM--YIEEGLVE 346
EKGML D P+V L +++ Y++ G VE
Sbjct: 389 FNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVE 448
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ + + + +++ + S +++ GF K R A ++ E + G P VTY +++
Sbjct: 449 EAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLM 508
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
NAYC +K ++ +EM K + VV Y+ ++ K ++ +++ L+ M+AKG
Sbjct: 509 NAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLA 568
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
P+ YN+++ +AK++R+ +L +M + P +Y +I R
Sbjct: 569 PDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCR 618
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 136/304 (44%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L + G EAL+ RD+ G + +Y+ L+ S +V A +L E E
Sbjct: 294 YTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEME 353
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ D L+ ++G V++ + + + M ++ + I+ G ++
Sbjct: 354 ANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLS 413
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A ++ LI P Y +I+ Y ++ +A +++ ++ K +V ++S++
Sbjct: 414 DARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLI 473
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ K ++ +A L+ +K G EP+ Y +LM+ + N+ ++ +L EM + +
Sbjct: 474 YGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIE 533
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P V+YT VI + R+ + V+ + R G D+ ++ F K + + +L
Sbjct: 534 PTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFEL 593
Query: 562 LQDM 565
L DM
Sbjct: 594 LDDM 597
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 163/391 (41%), Gaps = 20/391 (5%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEA---KKLPEFRPEKSTLKLLIRYLVQSKK-- 132
PD + +HG+ K + Q+ A Y E + P LK L + S
Sbjct: 359 PDLVTYSILIHGLCKQGKVQQ-AIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARM 417
Query: 133 -WDSIV--SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAF 189
+DS++ +L D +YN++ D + V VR K L IT +++ F
Sbjct: 418 YFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYK-----RLRDKAITP---SIVTF 469
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
NS + G+ K + E +K G+ + Y +M AY + G+ K+ L LE
Sbjct: 470 NSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNL 529
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
+ ++ T + Y ++ L K + E+++ DM+ KG+ D Y ++I F +
Sbjct: 530 KDIEPTVVT---YTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKD 586
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
++ A EL + + P L+ G VE V+ S+++ + ++
Sbjct: 587 MRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTT 646
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++ + AVKV+ Q++ +G Y+++IN C+ L ++A+ F M G
Sbjct: 647 MIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDG 706
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
+ M+ + + G + L+A M
Sbjct: 707 VSPDQEIFEMMLNAFHRAGHVHSVFELLAVM 737
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 112/250 (44%), Gaps = 5/250 (2%)
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
DV +K++ S S IV+G + + AV Q + P V++ +I++ Y
Sbjct: 136 DVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRY 195
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C++ L A+ F M + G +Y+ ++ G + +A+ L M+ +G +P++
Sbjct: 196 CKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDM 255
Query: 470 WIYNSL---MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
Y + + G R++ + K + + PD V+YT +I + + + ++
Sbjct: 256 VTYKIVAKGFHLLGLMSGAREI--IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRL 313
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ +G ++ + +++ K Q++E ++LL +M++ + D Y ++ L
Sbjct: 314 RRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCK 373
Query: 587 AGLQMQAQWL 596
G QA L
Sbjct: 374 QGKVQQAIQL 383
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW----------------- 492
+ DA++++ KMK + P++ YNSL+ NLR + +W
Sbjct: 99 VHDALFVLVKMKEQNLRPSIQTYNSLL------YNLRHTDIMWDVYNDIKDSGTPQSART 152
Query: 493 ---------------------KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
++ + ++ P VS+ T++S Y + D+ F+
Sbjct: 153 SSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMML 212
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
G + D I++ +EE ++L DM+ +G + D Y GL
Sbjct: 213 KYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMS 272
Query: 592 QAQWLQQ 598
A+ + Q
Sbjct: 273 GAREIIQ 279
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 194/431 (45%), Gaps = 7/431 (1%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYS 204
Y +LPD ++ + L+ A + A G E ++ +N G+ L +
Sbjct: 299 YGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISG 358
Query: 205 TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKI 264
V ++M G+ D Y ++ + ++G+ E+ L + S+ L S Y +
Sbjct: 359 AWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLK---LSIVTYTV 415
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L SL KSGR EA+ +M+ G+ D Y+ LI V+ A EL++E K
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR 475
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ + VC ++ E+G + + +S+ + + + +++G++K AV
Sbjct: 476 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 535
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+ Y+Q+I +G P VT+ S+I +C+ ++A K+ ++ G V Y++++ Y
Sbjct: 536 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 595
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ G + ++ +M+AK +P Y ++ + L + +L K M R + PD+
Sbjct: 596 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 655
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG---VFSKLSQIEELVKL 561
++Y TVI ++ +A + + +N+ + +++ V+ L + L+
Sbjct: 656 ITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVT 715
Query: 562 LQDMKSEGTKL 572
LQD TK+
Sbjct: 716 LQDQSIRLTKV 726
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 119/574 (20%), Positives = 232/574 (40%), Gaps = 100/574 (17%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSE-------DFKIYNVLPDAHTCSRLVASCVRAR 166
+ + L+ ++ +V+ + S SL E D+ + NV+ D C+ A V
Sbjct: 128 KGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDA 187
Query: 167 KFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTIL--VYEKMKSAG-------- 216
F +A ++ + + ++++ +NS + YN H + I+ VY ++K++G
Sbjct: 188 LFVLA----KMKVLNLQVSIATYNSLL--YNLRH---TDIMWDVYNEIKASGVPQNEYTN 238
Query: 217 -IVLDSGC--------------------------YCQIMEAYYKIGDSEKVAALFLECKS 249
I++D C + +M + K+G + + F C
Sbjct: 239 PILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFF--CMM 296
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
K P + Y IL L +G EAL+F DM+ G+ D Y L F +
Sbjct: 297 IKYGLLP-DVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL 355
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS------ 363
+ A ++ + G+ D L+ + + G +E++ + E M + LK+S
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415
Query: 364 ----------------------------DCISCAI-VNGFSKRRGYWAAVKVYEQLISQG 394
D ++ ++ ++G KR A+++YE++ S+
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR 475
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
P ++II+ S+A+ F + + + ++ Y+ M+ Y K G I +A+
Sbjct: 476 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 535
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
++ KG P + +NSL+ + L + KL ++ + P V+YTT+++ Y
Sbjct: 536 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 595
Query: 515 NRAREFDMCVKFYNEFRMNGGVI--DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
E DM F M I + ++V K ++ E V+LL+ M + G
Sbjct: 596 --CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFP 653
Query: 573 DERLYHSAMNALRDA-----GLQMQAQWLQQNFE 601
D+ Y++ + + A Q+ Q LQ + +
Sbjct: 654 DQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQ 687
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 152/367 (41%), Gaps = 5/367 (1%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
LL ++ + G K I +YE+M S I +S I+ ++ G + F
Sbjct: 445 LLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYF- 503
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
S +Y I+ D K G EA++ ++ + EKGI + SLI F
Sbjct: 504 --DSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFC 561
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
++ A +L + G++ L+ Y EEG + D++ M+ +K +
Sbjct: 562 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 621
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
+V G K +V++ + + ++G P Q+TY ++I ++C+ KA ++ +M
Sbjct: 622 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 681
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
Q V Y+ ++ G ++DA L+ ++ + Y +++ H ++
Sbjct: 682 LQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDV 741
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV-IDRAIAGI 544
+ + +M R Y+ VI+ + R KF+ + G+ D+ I +
Sbjct: 742 QNALVFFHQMVERGFEVSIRDYSAVINRLCK-RNLITDAKFFFCMMLTHGIPPDQDICLV 800
Query: 545 MVGVFSK 551
M+ F +
Sbjct: 801 MLNAFHR 807
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 170/436 (38%), Gaps = 61/436 (13%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNE--AKKLPEFRPEKSTLKLLIRYLVQSKK--- 132
PD + +HG+ K +E A + Y E +K++ P +I L +
Sbjct: 443 PDLLTYSVLIHGLCKRGAVEE-AIELYEEMCSKRI---YPNSFVCSAIISGLFEKGAISE 498
Query: 133 ----WDSIV--SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL 186
+DS+ ++E+ +YN++ D + + VR+ K I + +T
Sbjct: 499 AQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVT------ 552
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
FNS + G+ K + + + +K G+V S Y +M Y + GD + + E
Sbjct: 553 --FNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHE 610
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+++ + T + Y ++ L K GR E+++ + M +G+ D Y ++I SF
Sbjct: 611 MEAKAIKPTQIT---YTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCK 667
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
+++ A +L + M L+ S
Sbjct: 668 AHDLQKAFQLHNQ-----------------------------------MLQHSLQPSPVT 692
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
++NG A ++ L Q +V Y +II A+C A F +M
Sbjct: 693 YNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMV 752
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
++GF+ + YS+++ K I DA + M G P+ I +++ R+ +
Sbjct: 753 ERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPN 812
Query: 487 QVEKLWKEMERRKVTP 502
V +++ M + + P
Sbjct: 813 SVFEIFAMMIKCGLLP 828
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 193/481 (40%), Gaps = 41/481 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD ++S +H + K + + A + + P T LI + +W V
Sbjct: 255 PDLVTYNSVVHALCK-ARAMDKAEAFLRQMVN-KRVLPNNWTYNNLIYGYSSTGQWKEAV 312
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+ ++ + +++LPD T S L+ S + K K A + G+ + ++N + GY
Sbjct: 313 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 372
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+++ M GI D + +++AY G +K +F E + +
Sbjct: 373 ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 432
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y+ + +L + G+ +A++ F M ++G+ D Y LI F + + A+EL
Sbjct: 433 VT---YRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 489
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E GM LD+V +I+N K
Sbjct: 490 ISEIMNNGM----------------------HLDIV-------------FFSSIINNLCK 514
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A +++ ++ G P V Y +++ YC + KA +VF M G + VV
Sbjct: 515 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 574
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y ++V Y K GRI + + L +M +G +P+ +Y+ ++D A + + EM
Sbjct: 575 YGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMT 634
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ D +Y V+ + R FD + + E R I+ M+ + ++E
Sbjct: 635 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 694
Query: 557 E 557
E
Sbjct: 695 E 695
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 153/335 (45%), Gaps = 2/335 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAEELFKE 319
Y IL SL G++ +A R M E G + P++ Y ++I F +V A +LFKE
Sbjct: 188 YSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKE 247
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
++G+ D +V + ++K + M N ++ ++ ++ G+S
Sbjct: 248 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 307
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ AV+V++++ +P VT + ++ + C+ +A VF M KG + V +Y+
Sbjct: 308 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 367
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
M+ Y G + D L M G P+ + +N L+ + L + ++ EM
Sbjct: 368 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 427
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
V PD V+Y TVI+A R + D ++ +N+ G D+ ++ F + +
Sbjct: 428 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 487
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+L+ ++ + G LD + S +N L G M AQ
Sbjct: 488 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 522
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 178/408 (43%), Gaps = 42/408 (10%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y +++ ++K GD K LF E R + P Y + +L K+ +A F R
Sbjct: 225 YNTVIDGFFKEGDVNKACDLFKEMVQRGI---PPDLVTYNSVVHALCKARAMDKAEAFLR 281
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
M K +L + Y +LI ++S + K A +FKE +L D L+ + G
Sbjct: 282 QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 341
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
+++ DV ++M K + D S I +NG++ + +++ ++ G P T+
Sbjct: 342 KIKEARDVFDTMA-MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 400
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+I AY + KA +F EM+ G VV Y +++A + G++ DAM +M
Sbjct: 401 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 460
Query: 463 KGCEPNVWIYNSLMD---MHG---RAKNL--------------------RQVEKLWKEME 496
+G P+ + YN L+ HG +AK L + KL + M+
Sbjct: 461 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMD 520
Query: 497 RRKV---------TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMV 546
+ + PD V Y ++ Y + + ++ ++ ++ G+ + G +V
Sbjct: 521 AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM-VSAGIEPNVVGYGTLV 579
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ K+ +I+E + L ++M G K LY ++ L +AG + A+
Sbjct: 580 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAK 627
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 147/343 (42%), Gaps = 7/343 (2%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALK-FFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ H+ + C++ R EAL E G + D Y+ L+ S + A++
Sbjct: 151 IANHLLEGFCEA----KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 206
Query: 316 LFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L + E G + P V ++ + +EG V K D+ + M + ++V+
Sbjct: 207 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 266
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
K R A Q++++ +P TY ++I Y + +A +VF EM++
Sbjct: 267 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 326
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VV S ++ K G+I++A + M KG P+V+ YN +++ + L + L+
Sbjct: 327 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 386
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
M + PD ++ +I AY D + +NE R +G D ++ ++
Sbjct: 387 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 446
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++++ ++ M +G D+ Y+ + G ++A+ L
Sbjct: 447 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 489
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/428 (19%), Positives = 180/428 (42%), Gaps = 6/428 (1%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL-LAFNSAMGGYNKLHMYYSTI 206
+ PD T + +V + +AR A L+ + + +N+ + GY+ + +
Sbjct: 253 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 312
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
V+++M+ I+ D +M + K G ++ +F + + FS Y I+
Sbjct: 313 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS---YNIML 369
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ G + F M GI D + LI ++A+ + A +F E + G+
Sbjct: 370 NGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 429
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D ++ G ++ ++ M + + ++ GF A ++
Sbjct: 430 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 489
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
++++ G V ++SIIN C++ A+ +F G V Y+ ++ Y
Sbjct: 490 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCL 549
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G++ A+ + M + G EPNV Y +L++ + + + + L++EM +R + P +
Sbjct: 550 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 609
Query: 507 YTTVISA-YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
Y+ +I + R +KF+ E +G +D I++ K +E + L +++
Sbjct: 610 YSIIIDGLFEAGRTVPAKMKFH-EMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 668
Query: 566 KSEGTKLD 573
++ K++
Sbjct: 669 RAMNVKIN 676
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/437 (18%), Positives = 174/437 (39%), Gaps = 5/437 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTI-L 207
P +HT + L+ C RA + ++A Q+ T + ++ N + G+ + + +
Sbjct: 112 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 171
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ + G V D Y ++++ G S + L +P + Y + D
Sbjct: 172 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSP-NVVAYNTVID 230
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
K G +A F++M ++GI D Y S++ + + AE ++ K +L
Sbjct: 231 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 290
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG-FSKRRGYWAAVKV 386
+ L+ Y G ++ + V + M+ + + D ++ +++ G K A V
Sbjct: 291 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI-LPDVVTLSMLMGSLCKYGKIKEARDV 349
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
++ + +G P +Y ++N Y +F M G ++ ++ Y
Sbjct: 350 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 409
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G + AM + +M+ G +P+V Y +++ R + + + +M + V PDK +
Sbjct: 410 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 469
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y +I + + +E NG +D ++ KL ++ + +
Sbjct: 470 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 529
Query: 567 SEGTKLDERLYHSAMNA 583
+ G D +Y+ M+
Sbjct: 530 NVGLHPDAVVYNMLMDG 546
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 152/369 (41%), Gaps = 16/369 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T +LI+ D + + + + + V PD T ++A+ R K A
Sbjct: 395 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 454
Query: 175 LQVFITDGEIA-LLAFNSAMGGY-NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
I G A+N + G+ + + L+ E M + G+ LD + I+
Sbjct: 455 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN-GMHLDIVFFSSIINNLC 513
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K+G +F + L +Y +L D G+ +AL+ F M GI
Sbjct: 514 KLGRVMDAQNIFDLTVNVGLHPDAV---VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 570
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ Y +L+ + I + LF+E ++G+ P L +++ +GL E V
Sbjct: 571 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGI--KPSTILYSIII---DGLFEAGRTVP 625
Query: 353 ESMK-----NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
MK + + + C ++ G K R + A+ ++++L + +T ++I+
Sbjct: 626 AKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMID 685
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+ +A+ +F + + VV YS M+ K G + +A + + M+ GCEP
Sbjct: 686 GMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 745
Query: 468 NVWIYNSLM 476
N + N ++
Sbjct: 746 NSRLLNHVV 754
>gi|449463623|ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Cucumis sativus]
Length = 580
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 165/332 (49%), Gaps = 10/332 (3%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
FS + +L + GK G A K M +KG + + +L+ ++ AE +
Sbjct: 136 FSEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAI 195
Query: 317 FKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAK---LKISDCISCAIV 371
F+ + G +P +++ ++E ++ ++ +S+ N + LK + I+
Sbjct: 196 FRRMQSGG--PEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMII 253
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
F K Y A KV+ ++ ++G VTY S+++ Y + K++ +MQ+ G
Sbjct: 254 YMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQ 310
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
VV+Y+ +++ YGK R +A+ + +M G P YN L+D + + Q + +
Sbjct: 311 PDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKIV 370
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+K M+R + +PD SYTT++SAY A + + F+ + +G + G ++ ++K
Sbjct: 371 FKSMKRDRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNVVTYGTLIKGYAK 430
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++ +E+++K ++MK G ++++ + + M+A
Sbjct: 431 INNLEKMIKRYEEMKVNGIRVNQTILTTIMDA 462
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 162/355 (45%), Gaps = 9/355 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
+ ++ AY K+GD + A L ++K + +H L ++ G+ R A FR
Sbjct: 141 FVMLITAYGKLGDFNR-AEKVLNLMNKKGYAPNVVSHT--ALMEAYGRGRRYNNAEAIFR 197
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKE--AEEKGMLR-DPEVCLKLVLMYI 340
M+ G Y ++ +F ++ K AEELF +EK +L+ D ++ ++ M+
Sbjct: 198 RMQSGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFK 257
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ G EK V M + + +++ S Y K+Y+Q+ G P V
Sbjct: 258 KAGNYEKARKVFAEMAARGVPQTTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVV 314
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
+YA +I+AY + +A VF EM G AY+ ++ + +G + A + M
Sbjct: 315 SYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKIVFKSM 374
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
K C P++ Y +++ + A ++ E ++ +++ P+ V+Y T+I Y +
Sbjct: 375 KRDRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNVVTYGTLIKGYAKINNL 434
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+ +K Y E ++NG +++ I ++ + K V +++S G + D++
Sbjct: 435 EKMIKRYEEMKVNGIRVNQTILTTIMDAYGKNKDFGSAVIWFNEIESCGLRPDQK 489
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 174/375 (46%), Gaps = 17/375 (4%)
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
Y KL + V M G + + +MEAY + A+F +S +
Sbjct: 147 AYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGGPEP 206
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDM--KEKGILE-DPSIYASLICSFASITEVK 311
+ + Y+I+ + + + EA + F + KEK +L+ D ++ +I F +
Sbjct: 207 SALT---YQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYE 263
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI- 370
A ++F E +G+ P+ + + E ++ + + M+ A L+ D +S A+
Sbjct: 264 KARKVFAEMAARGV---PQTTVTYNSLMSFETNYKEVSKIYDQMQRAGLQ-PDVVSYALL 319
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++ + K R A+ V+E+++ G P Y +++A+ + +A+ VF M++
Sbjct: 320 ISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKIVFKSMKR--- 376
Query: 431 DKC---VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
D+C + +Y++M++ Y + A ++K G PNV Y +L+ + + NL +
Sbjct: 377 DRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNVVTYGTLIKGYAKINNLEK 436
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+ K ++EM+ + ++ TT++ AY + ++F V ++NE G D+ I++
Sbjct: 437 MIKRYEEMKVNGIRVNQTILTTIMDAYGKNKDFGSAVIWFNEIESCGLRPDQKAKNILLS 496
Query: 548 VFSKLSQIEELVKLL 562
+ +++E +L+
Sbjct: 497 LAKTAEELDEANQLV 511
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L+ +G+ + + EK+ M ++ P+ VS+T ++ AY R R ++ + + G
Sbjct: 144 LITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGG 203
Query: 535 GVIDRAIAGIMVGVF---SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
IM+ F SK + EEL L + + K D++++H + + AG
Sbjct: 204 PEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAG 260
>gi|255661132|gb|ACU25735.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 426
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 160/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + R
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENRK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 150/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G+ + L+ MY+E + L V M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVTPNTASYSTLLTMYVENRKFLEALSVFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM------------------- 532
++++ V D+V Y T+I AY RA + +E +
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 533 ------------NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDIXVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALI 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 162/353 (45%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG+ ++ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENRKFLEALSVFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ +A + + GRI +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDIXVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD +++AY + EFD Y E + G V
Sbjct: 370 KYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
R+F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 142/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V+++K+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTASYSTLLTMYVENRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDIAIHILAGAGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A I+NAY +
Sbjct: 343 FRQAIDAGEVKDIXVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANDVYMEMQEVG 420
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D ++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDIXVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/545 (20%), Positives = 221/545 (40%), Gaps = 74/545 (13%)
Query: 108 KKLPEF--RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHT--CSRLVASCV 163
+++PE P+ + +L++ L K+ + E ++ +++ D H C V S
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAE------EALELLHMMADDHGRRCPPNVVS-- 201
Query: 164 RARKFKIANTLLQVFITDGEIA-----------------LLAFNSAMGGYNKLHMYYSTI 206
+ ++ F T+G++ ++ + + + G K ++
Sbjct: 202 -------YSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAE 254
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
V+++M G ++ Y ++ Y IG ++V + E +R L ++ Y L
Sbjct: 255 GVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYT---YGSLL 311
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ L K+GR EA FF M KGI S Y LI +A+ + E G+
Sbjct: 312 NYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLS 371
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D + Y + G+++K +D+ M+ L + A+++ K A
Sbjct: 372 PDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVK 431
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF------------DKCV 434
+ Q+I++G P V + S++ C + + +AE++ EM +G + C
Sbjct: 432 FNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCN 491
Query: 435 V-----------------------AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
V +Y+ +++ Y TGR +A + M + G P
Sbjct: 492 VGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVT 551
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
YN+L+ + A + L++EM R+ VTP V+Y T++ + + F + Y
Sbjct: 552 YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMI 611
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
+G D I++ K + ++E K+ Q + S+G +L+ + + AL G +
Sbjct: 612 NSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKE 671
Query: 592 QAQWL 596
A L
Sbjct: 672 DAMDL 676
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/483 (20%), Positives = 204/483 (42%), Gaps = 16/483 (3%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F+P T LI + KW +V + E+ + PD +T L+ + + + A
Sbjct: 265 FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREAR 324
Query: 173 TLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKS-------AGIVLDSGCYC 225
I G + Y L Y+T +M S G+ D +
Sbjct: 325 FFFDSMIRKG------IKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFN 378
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
AY K G +K +F + + L + Y L D+L K GR +A F M
Sbjct: 379 IFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVN---YGALIDALCKLGRVDDAEVKFNQM 435
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+G+ + ++ SL+ ++ + + AEEL E ++G+ + L+ G V
Sbjct: 436 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRV 495
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+ +++ M++ ++ +++G+ A KV++ ++S G P +VTY ++
Sbjct: 496 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTL 555
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
++ YC + A +F EM +KG VV Y++++ +T R +A L M G
Sbjct: 556 LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 615
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
+ +++ YN +++ ++ + + K+++ + + + + +++T +I A + + +
Sbjct: 616 KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 675
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
+ NG V + ++ + +EE L M+ GT + ++ ++ + L
Sbjct: 676 LFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 735
Query: 586 DAG 588
G
Sbjct: 736 HRG 738
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 137/329 (41%), Gaps = 6/329 (1%)
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
+ K LC + G A + L + M E G + D Y L+ + + A EL
Sbjct: 129 NQLLKGLCHG-KRVGEAMDVL--LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLH 185
Query: 319 E-AEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
A++ G P V +++ + EG V+K ++ M + + +++G
Sbjct: 186 MMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLC 245
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K + + A V++Q+I G P TY +I+ Y I + + ++ EM +G
Sbjct: 246 KAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCY 305
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y S++ K GR R+A + M KG +P V Y L+ + L ++ M
Sbjct: 306 TYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLM 365
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
++PD + SAY + D + +N+ R +G + G ++ KL ++
Sbjct: 366 VENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRV 425
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++ M +EG + +++S + L
Sbjct: 426 DDAEVKFNQMINEGVTPNIVVFNSLVYGL 454
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 152/326 (46%), Gaps = 4/326 (1%)
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
H+ +L + G + E++ + +M +GI D + +L+ + +V+ A + +
Sbjct: 150 NHLLNVLVE--GSKMKLLESV--YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLE 205
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E +G+ D L+ ++EEG +E L V M + ++NG+ K
Sbjct: 206 EMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLG 265
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A+ +Q I+ G P Q+TY + +N C+ A KV M Q+G D V Y+
Sbjct: 266 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 325
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+V K G++ +A ++ +M +GC P++ +N+L+ L + L +++ +
Sbjct: 326 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
V+PD ++ +I+A + + + ++ + E + +G D ++ L ++ +
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNAL 584
+ LL+DM+S G Y++ ++ L
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGL 471
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 14/267 (5%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ + IL ++L K G AL+ F +MK G D Y +LI + S+ ++ A +L
Sbjct: 390 DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLL 449
Query: 318 KEAEEKGMLRDPEVCLKLVLMY--IEEGL-----VEKTLDVVESMKNAKLKISDCISCAI 370
K+ E G C + + Y I +GL +E+ +V + M + + +
Sbjct: 450 KDMESTG-------CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++G K + A ++ Q+IS+G P +TY SI+ YC+ KA + M GF
Sbjct: 503 IDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+ VV Y +++ K GR + A+ ++ M+ KG P YN ++ R N+R
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALS 622
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRA 517
L++EM PD ++Y V R
Sbjct: 623 LFREMAEVGEPPDALTYKIVFRGLCRG 649
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/487 (18%), Positives = 198/487 (40%), Gaps = 49/487 (10%)
Query: 145 IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYY 203
++ + D + L+ V K K+ ++ G + ++ FN+ M + H
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE---KVAALFLE--CKSRKL------ 252
+ +L+ E+M S G+ D + +M+ + + G E +V A LE C + K+
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 253 ---------------------DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
D Y + L ++ ALK M ++G
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG-- 316
Query: 292 EDPSIYA-----SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
DP ++ + +C + E A+ + + ++G L D L+ +E
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEE---AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ LD+ + + ++N K A++++E++ + GC P +VTY ++I
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
+ C + KA + +M+ G + + Y++++ K RI +A + +M +G
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
N +N+L+D + K + +L +M + P+ ++Y ++++ Y + +
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM----- 581
NG +D G ++ K + + +K+L+ M+ +G + + Y+ +
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613
Query: 582 -NALRDA 587
N +RDA
Sbjct: 614 RNNIRDA 620
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 142/318 (44%), Gaps = 6/318 (1%)
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI D +Y L+ +++KL E ++ E +G+ D L+ V
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+ ++E M + + + ++ GF + AA++V +++ GC +VT +IN
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260
Query: 409 YCRIALYSKAEKVFIEMQQK---GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
YC++ + E +QQ+ GF+ + Y++ V + + A+ ++ M +G
Sbjct: 261 YCKLG---RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
+P+V+ YN +++ + L + + + +M R PD ++ T+I+A + +
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
+ + G D I++ K+ ++L ++MK+ G DE Y++ ++ L
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437
Query: 586 DAGLQMQAQWLQQNFEGT 603
G +A L ++ E T
Sbjct: 438 SLGKLGKALDLLKDMEST 455
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 161/402 (40%), Gaps = 53/402 (13%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEF------RPEKSTLKLLIRYLVQSK 131
PD +++F++G+ ++ D+ A K+ + P+ T +++ L ++
Sbjct: 284 PDQITYNTFVNGLCQN--------DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG 335
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFN 190
+ + + LPD T + L+A+ C R + + QV + + FN
Sbjct: 336 QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFN 395
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ K+ + + ++E+MK++G D Y +++ +G K L + +S
Sbjct: 396 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 455
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
P ST Y + D L K R EA + F M +GI + + +LI ++
Sbjct: 456 ---GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A EL + +G+ + ++ Y ++G ++K D++E+M
Sbjct: 513 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT-------------- 558
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
NGF V V VTY ++IN C+ A KV M+ KG
Sbjct: 559 ANGFE--------VDV-------------VTYGTLINGLCKAGRTQVALKVLRGMRIKGM 597
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
AY+ ++ + IRDA+ L +M G P+ Y
Sbjct: 598 RPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTY 639
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 200/463 (43%), Gaps = 57/463 (12%)
Query: 144 KIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMY 202
KIYN++ DA L FK+ N L ++G E + +N + +
Sbjct: 145 KIYNLVLDALLSQNL---------FKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKV 195
Query: 203 YSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMY 262
+ +M + G D Y ++ + K+GD +K L ++ + +Y
Sbjct: 196 DGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEP--------VVPVY 247
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAEELFKEA 320
L + K R EA +M ++G+ DP++ Y+++I + + V+L+ +F
Sbjct: 248 NALIHGVCKECRFKEAFDLMNEMVDRGV--DPNVISYSTVISCLSDMGNVELSLAVFGRM 305
Query: 321 EEKG------------------------------MLRD---PEVCLKLVLMY--IEEGLV 345
+G M+R+ P V L++ +G +
Sbjct: 306 FVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNM 365
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
++ + V M+ ++ + I+ GF+K +A + + ++I+ GC P V Y +
Sbjct: 366 DEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCM 425
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
++ C+++++ +A + M G V+ +++ + + GR+ AM ++ +M+ C
Sbjct: 426 VDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYEC 485
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
PN+ YN L+D RA R+ L +E+E RKV D V+Y T++ ++ ++
Sbjct: 486 LPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQ 545
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+ +NG +D V + KL +++ +K+L ++ +E
Sbjct: 546 LLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAE 588
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/496 (19%), Positives = 195/496 (39%), Gaps = 80/496 (16%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
+ +Y+ F+ T + +I L ++ + D + L + K+ NV P + + V
Sbjct: 57 SLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENV-PCSQELFQFV 115
Query: 160 ASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVL 219
C R G L M+Y +++ G
Sbjct: 116 IKCYRRSNL--------------------------GEQGLKMFY-------RIREFGCEP 142
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
Y +++A + + AL+ KS L+ F+ Y +L +L ++G+ A
Sbjct: 143 SVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFT---YNVLLKALCQNGKVDGAC 199
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
K +M KG D Y ++I S + +V A EL + E +V +Y
Sbjct: 200 KLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFE------------PVVPVY 247
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
A+++G K + A + +++ +G P
Sbjct: 248 ----------------------------NALIHGVCKECRFKEAFDLMNEMVDRGVDPNV 279
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
++Y+++I+ + + VF M +G V ++S++ + GR+ DA+ L
Sbjct: 280 ISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNL 339
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M +G PNV YN+L+ N+ + +W +ME+ + P+ +Y+T+I + ++ +
Sbjct: 340 MIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGD 399
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ +N+ G + + MV V ++S ++ L+ +M S+G +++
Sbjct: 400 LVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNN 459
Query: 580 AMNALRDAGLQMQAQW 595
+ L AG + +W
Sbjct: 460 FIKGLCRAG---RVEW 472
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 7/195 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T I+ L ++ + + +++ + + Y LP+ T + L+ RA F+ A L
Sbjct: 452 PTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGL 511
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
++ E + +N+ M G++ M+ + + KM GI LD+ + AY K
Sbjct: 512 IRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCK 571
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKI--LCDSLGKSGRAFEALKFFRDMKEKGIL 291
+G + + + K TH + +C+ LG EA+ + +M ++GI
Sbjct: 572 LGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTE----EAVVYLHEMLKRGIF 627
Query: 292 EDPSIYASLICSFAS 306
+ + + L+ F S
Sbjct: 628 PNIATWNVLVRGFFS 642
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/522 (20%), Positives = 230/522 (44%), Gaps = 16/522 (3%)
Query: 71 SHHQTAVPDAKKFDSFLHGMLKDPQTQEL--AYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
+H + + +F +F+ K + + + A ++++ K+ P LL+ ++V
Sbjct: 28 NHEIQSHSNKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPL-PSVIDFTLLLGFIV 86
Query: 129 QSKKWDSIVSLSEDF-KIYNVLPDAHTCSRLVASCVR----ARKFKIANTLLQVFITDGE 183
+ K + + +SL ++ + PD + ++ S A F + T+L++ + E
Sbjct: 87 KMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGL---E 143
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
+++ F + G + + + ++ G D Y ++ K+G + +
Sbjct: 144 PSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGW 203
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
+ + R + + +Y + D L K G EAL +M KGI + Y LI
Sbjct: 204 LRKMEERNWNP---NVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQG 260
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ K A L E + G++ D + LV + +EG + + V+ M ++
Sbjct: 261 LCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVG-EVP 319
Query: 364 DCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
D + ++++ + + A +V+E ++S+GC+P V Y S+I+ +C+I +KA +
Sbjct: 320 DVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLL 379
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
EM + GF VV +++++ + + GR A L M G PN+ ++D ++
Sbjct: 380 DEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKS 439
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
+ L + L+ ME+ + + V Y+ ++ A + + ++ ++ G I+
Sbjct: 440 QLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAY 499
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
IM+ F+K +++ LL +M+ G D Y+ + L
Sbjct: 500 TIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGL 541
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 138/368 (37%), Gaps = 36/368 (9%)
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
GK EAL FF M + L + L+ + A L KE ++
Sbjct: 51 GKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPD 110
Query: 330 EVCLKLVLMYI-EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS------------- 375
L +V+ + LV V+ +M L+ S ++NG
Sbjct: 111 TFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVD 170
Query: 376 --KRRGYWAAVKVYEQLISQGC--------------------IPGQVTYASIINAYCRIA 413
++ GY + VK Y LI+ C P V Y+++++ C+
Sbjct: 171 HVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDG 230
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
L S+A + +EM KG +V Y+ ++ GR ++A L+ +M G P++ N
Sbjct: 231 LVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLN 290
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
L+D+ + + Q + + M PD +Y ++I Y + D + +
Sbjct: 291 ILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSR 350
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G + D ++ + K+ I + + LL +M G D + + + G + A
Sbjct: 351 GCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAA 410
Query: 594 QWLQQNFE 601
+ L N
Sbjct: 411 KELFLNMH 418
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/535 (20%), Positives = 226/535 (42%), Gaps = 51/535 (9%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
+D + Q +VP ++S LH M + ++ +D YNE K + E +T L+
Sbjct: 197 KDLNFQASVP---TYNSLLHNM----RHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCE 249
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG------ 182
QSK D+I L + K+ V P + + +++ + +A + + + +G
Sbjct: 250 QSKLEDAISFLHDSNKV--VGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSF 307
Query: 183 ------------------------------EIALLAFNSAMGGYNKLHMYYSTILVYEKM 212
E ++ +N+ G+ L + V +KM
Sbjct: 308 SYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367
Query: 213 KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKS 272
G+ D Y ++ + ++G+ E+ L E SR + Y +L L K
Sbjct: 368 LLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGF---KLNVIFYNMLLSCLCKV 424
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
GR EAL F +M+ + D +Y+ LI V+ A +L+++ K
Sbjct: 425 GRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQ 484
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
++L + G + + + ++ L + +++G+ + G A+++Y ++I
Sbjct: 485 RAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIE 544
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
+G P VT+ ++IN +CR +A K+ ++ KG VV Y++++ Y + G +++
Sbjct: 545 RGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQE 604
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
+ +M+A P Y L+ R + + +L + M + + PD V+Y T+I
Sbjct: 605 MFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQ 664
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG---VFSKLSQIEELVKLLQD 564
+ + +E ++ YN ++ + +++ +F L ++ +V ++D
Sbjct: 665 CFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIED 719
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 128/297 (43%), Gaps = 3/297 (1%)
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
D Y +++ Y ++ + L+ + R + TP S + L + + G EA
Sbjct: 515 DVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGI--TP-SVVTFNTLINGFCRRGDLMEAR 571
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
K ++ KG++ Y +L+ ++ + ++ E E ++ L+
Sbjct: 572 KMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGL 631
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ + ++L ++E M L I+ F K + A+++Y ++ C P Q
Sbjct: 632 CRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQ 691
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
VTY +INA C +++ + ++ + V Y +++ + G++ A+ +
Sbjct: 692 VTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQ 751
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
M AKG ++ Y+++++ + + + + + M VTPD TV++A+++
Sbjct: 752 MLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQ 808
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 110/250 (44%), Gaps = 3/250 (1%)
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI-PGQVTYASIINA 408
DV +K + S+C + +++G ++ A+ S + P V+ +I++
Sbjct: 223 DVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHD--SNKVVGPSIVSINTIMSK 280
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+C++ L A F M + G +Y+ ++ G + +A+ M+ G EP+
Sbjct: 281 FCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPD 340
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
V YN+L + K+ ++M + + PD V+YTT+I + + + +K
Sbjct: 341 VVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQ 400
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E G ++ +++ K+ +IEE + L +M++ + D +Y ++ L G
Sbjct: 401 ETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEG 460
Query: 589 LQMQAQWLQQ 598
+A L +
Sbjct: 461 FVQRAYQLYE 470
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 120/566 (21%), Positives = 223/566 (39%), Gaps = 68/566 (12%)
Query: 41 VTVNPSSIINHRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKD------- 93
+T+ P S N + F + + PT+ ++ D KFD G L D
Sbjct: 65 LTLVPPSHDNTKDFNNSVHSKHPTL-------GSGSIIDEDKFDDAKFGFLSDKGKLLFS 117
Query: 94 ----PQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIY--- 146
EL D++N K F ++ L++ L S W+ + L E ++
Sbjct: 118 SIVGSPLHELN-DFFNSVK----FELLEADFPSLLKALDLSGNWERALLLFEWGWLHFGS 172
Query: 147 --NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYY 203
N+ D +V R + IA+ L + + + + A+ + + Y + Y
Sbjct: 173 DQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYK 232
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS-EKVAALFLECKSRKLDSTPFSTHMY 262
I ++ KMK G+ Y +++ Y K+G S +++ L E +S+ L+ F+
Sbjct: 233 RAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTV 292
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
C G+ G EA KF ++K G Y S++ F A + KE E+
Sbjct: 293 ISAC---GREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMED 349
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
D +L Y+ G +++ + V+++M + + + +++ + K
Sbjct: 350 NNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDD 409
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A++++ + GC P TY S++ A
Sbjct: 410 ALRLFSLMKDLGCAPNVYTYNSVL-----------------------------------A 434
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
M GK R D + ++ +MK GC PN +N+++ + V K+ +EM+ P
Sbjct: 435 MLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEP 494
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
DK ++ T+ISAY R K Y E +G ++ ++ + ++
Sbjct: 495 DKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVI 554
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAG 588
QDM+++G K +E Y ++ AG
Sbjct: 555 QDMRTKGFKPNENSYSLLLHCYSKAG 580
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 156/381 (40%), Gaps = 37/381 (9%)
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
LD Y I+ +Y + G ++ LF + K LD T + Y ++ D GK GR+++
Sbjct: 213 LDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVT---YNVMLDVYGKMGRSWDR 269
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+ EL E KG+ D C ++
Sbjct: 270 IL----------------------------------ELLDEMRSKGLELDEFTCSTVISA 295
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
EG++++ + +K K +++ F K Y A+ + +++ C P
Sbjct: 296 CGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPD 355
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
VTY + Y R + V M KG + Y++++ YGK GR DA+ L +
Sbjct: 356 SVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFS 415
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
MK GC PNV+ YNS++ M G+ V K+ EM+ P++ ++ T+++ +
Sbjct: 416 LMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEG 475
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ + K E + G D+ ++ +++ + K+ +M G Y+
Sbjct: 476 KHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYN 535
Query: 579 SAMNALRDAGLQMQAQWLQQN 599
+ +NAL G A+ + Q+
Sbjct: 536 ALLNALARRGDWKAAESVIQD 556
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/515 (20%), Positives = 217/515 (42%), Gaps = 57/515 (11%)
Query: 67 LNRDSHHQTA------VP------DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR 114
L R+S H A +P D + + + LH + + + A D + + K++
Sbjct: 190 LGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKR-AIDLFGKMKEI-GLD 247
Query: 115 PEKSTLKLLIR-YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
P T +++ Y + WD I+ L ++ + + D TCS ++++C R A
Sbjct: 248 PTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARK 307
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L +G + + +NS + + K +Y + + ++M+ DS Y ++ Y
Sbjct: 308 FLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYV 367
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+ G ++ A+ S+ + + Y + D+ GK+GR +AL+ F MK+ G
Sbjct: 368 RAGFLDEGMAVIDTMTSKGVMPNAIT---YTTVIDAYGKAGREDDALRLFSLMKDLGCAP 424
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ Y S++ + + ++ E + G + ++ + EEG V+
Sbjct: 425 NVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVL 484
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
MKN GF P + T+ ++I+AY R
Sbjct: 485 REMKNC--------------GFE---------------------PDKDTFNTLISAYARC 509
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+ K++ EM + GF CV Y++++ + G + A ++ M+ KG +PN Y
Sbjct: 510 GSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSY 569
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+ L+ + +A N++ +EK+ KE+ V P + T++ ++ R + +++ +
Sbjct: 570 SLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQK 629
Query: 533 NGGVIDRAIAGIMVGVFSK---LSQIEELVKLLQD 564
G D + M+ +F++ S+ E++ + +
Sbjct: 630 YGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHE 664
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 163/329 (49%), Gaps = 7/329 (2%)
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
LG+ + A K F + + D Y +++ S+A + K A +LF + +E G+ D
Sbjct: 190 LGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGL--D 247
Query: 329 PEVCLKLVLM--YIEEGLV-EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAV 384
P + V++ Y + G ++ L++++ M++ L++ D +C+ V R G A
Sbjct: 248 PTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLEL-DEFTCSTVISACGREGMLDEAR 306
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
K +L G PG VTY S++ + + +Y++A + EM+ V Y+ + A Y
Sbjct: 307 KFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATY 366
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ G + + M ++ M +KG PN Y +++D +G+A +L+ M+ P+
Sbjct: 367 VRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNV 426
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+Y +V++ + + +K E ++NG +RA M+ V S+ + + K+L++
Sbjct: 427 YTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLRE 486
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQA 593
MK+ G + D+ +++ ++A G ++ +
Sbjct: 487 MKNCGFEPDKDTFNTLISAYARCGSEVDS 515
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 154/332 (46%), Gaps = 5/332 (1%)
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
H Y + +L +MK+ G D + ++ AY + G A ++ E K TP T
Sbjct: 477 HNYVNKVL--REMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMV--KSGFTPCVT 532
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
Y L ++L + G A +DM+ KG + + Y+ L+ ++ VK E++ KE
Sbjct: 533 -TYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKE 591
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ + + LVL + + + ++ K + ++++ F++ +
Sbjct: 592 IYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKM 651
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A ++ + G P TY +++ Y R KAE+V +Q G + VV+Y++
Sbjct: 652 FSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNT 711
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ + + G +++A+ ++++M KG +P + YN+ + + + + ++ + M
Sbjct: 712 VIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHN 771
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
P +++Y ++ Y +A +++ + F ++ +
Sbjct: 772 CRPSELTYKILVDGYCKAGKYEEAMDFVSKIK 803
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/504 (19%), Positives = 209/504 (41%), Gaps = 44/504 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P K ++ L ML + + Q + Y N + E P T +L++ L ++ + D
Sbjct: 147 PTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKE--PNVYTYNILLKALCKNNRVDGAC 204
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
L + PD + + +++S + K + A L F + + +N+ + G+
Sbjct: 205 KLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSV----YNALINGFC 260
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
+ + L+ +M GI + Y ++ + IG+ E A++ + R +
Sbjct: 261 REYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVY 320
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ + L GR EAL + M E+G + Y +LI S ++ A +
Sbjct: 321 T---FTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVS 377
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+ E G C V Y A+++GF+K
Sbjct: 378 SKMERNG-------CSPNVSTY----------------------------GALIDGFAKA 402
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A +++ ++++ GCIP V Y S++N CR +++S+A + +M V +
Sbjct: 403 GDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTF 462
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++ + +GR+ A+ L +M+ GC PN+ YN ++D + +++ +L EME
Sbjct: 463 NTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEE 522
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ + + V+Y T+ + +F+ +K + + G D + + +++
Sbjct: 523 KGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKT 582
Query: 558 LVKLLQDMKSEGTKLDERLYHSAM 581
++LL + + G + E ++++
Sbjct: 583 AIQLLDKLSAGGKWVPEVAAYTSL 606
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 112/567 (19%), Positives = 214/567 (37%), Gaps = 71/567 (12%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQE---------------------LAYDYYNEAKKLP 111
H+ +P + L+ K P+ QE LA +Y+
Sbjct: 14 HKPLIPFVLNTNPILNPGNKPPEYQEIKTPIKESDVVMRLRTETDIVLASNYFRSIANSK 73
Query: 112 EFRPEKSTLKLLI------------RYLVQSKKWDSIVSLSEDF--KIYNVLPDAHTCSR 157
F+ + T +++I +YL+Q K + I S SED + N +
Sbjct: 74 AFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGI-SCSEDLFINVINTYRRVGLAEQ 132
Query: 158 LVASCVRARKF------KIANTLLQVFITDGEIALL-----------------AFNSAMG 194
+ R R+F KI N LL +++ ++ +N +
Sbjct: 133 ALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLK 192
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
K + + +M + G D Y ++ + K+G E+ L + +
Sbjct: 193 ALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQP----- 247
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKL 312
+ +Y L + + + E M EKGI DP++ Y+++I S + I V+L
Sbjct: 248 ---NVSVYNALINGFCREYKVKEVFLLLGQMVEKGI--DPNVITYSTVISSLSGIGNVEL 302
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A ++ + +G + L+ Y G V + L++ M + + +++
Sbjct: 303 ALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIH 362
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G AV V ++ GC P TY ++I+ + + A +++ +M G
Sbjct: 363 GLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIP 422
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
VV Y+SMV + ++ A L+ KM C PN +N+ + + + L+
Sbjct: 423 NVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLF 482
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+ME+ +P+ +Y V+ + ++ E G ++ + G F +
Sbjct: 483 CQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNV 542
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHS 579
+ EE +KLL M G K D Y++
Sbjct: 543 GKFEEALKLLGKMLVGGVKPDAITYNT 569
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 154/349 (44%), Gaps = 17/349 (4%)
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
KL+ S ++ + ++ + G A +ALK F ++E G IY L+ + S
Sbjct: 106 KLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRF 165
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISC 368
++ E ++ + G ++P V +L+ + V+ ++ M N + D +S
Sbjct: 166 QMIEPIYSNMKRDG--KEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCE-PDVVSY 222
Query: 369 AIVNGFSKRRGYWAAVKVYE-QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI---E 424
V + G KV E + +S P Y ++IN +CR K ++VF+ +
Sbjct: 223 TTVISSMSKLG-----KVEEARELSIRFQPNVSVYNALINGFCR---EYKVKEVFLLLGQ 274
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M +KG D V+ YS++++ G + A+ + AKM +GC PNV+ + SLM +
Sbjct: 275 MVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGR 334
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+ + +W M P+ V+Y T+I + V ++ NG + + G
Sbjct: 335 VLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGA 394
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
++ F+K + ++ M + G + +Y S +N L + + QA
Sbjct: 395 LIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQA 443
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/203 (18%), Positives = 81/203 (39%), Gaps = 35/203 (17%)
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
Q+TY +I R + + +M+ +G + +++ Y + G A+ +
Sbjct: 79 QLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFY 138
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+++ GC+P V IYN L+D + +E ++ M+R P+ +Y ++ A
Sbjct: 139 RIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKA----- 193
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
K ++++ KLL +M ++G + D Y
Sbjct: 194 ------------------------------LCKNNRVDGACKLLVEMSNKGCEPDVVSYT 223
Query: 579 SAMNALRDAGLQMQAQWLQQNFE 601
+ ++++ G +A+ L F+
Sbjct: 224 TVISSMSKLGKVEEARELSIRFQ 246
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 152/326 (46%), Gaps = 4/326 (1%)
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
H+ +L + G + E++ + +M +GI D + +L+ + +V+ A + +
Sbjct: 150 NHLLNVLVE--GSKMKLLESV--YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLE 205
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E +G+ D L+ ++EEG +E L V M + ++NG+ K
Sbjct: 206 EMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLG 265
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A+ +Q I+ G P Q+TY + +N C+ A KV M Q+G D V Y+
Sbjct: 266 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 325
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+V K G++ +A ++ +M +GC P++ +N+L+ L + L +++ +
Sbjct: 326 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
V+PD ++ +I+A + + + ++ + E + +G D ++ L ++ +
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNAL 584
+ LL+DM+S G Y++ ++ L
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGL 471
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 121/267 (45%), Gaps = 14/267 (5%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ + IL ++L K G AL+ F +MK G D Y +LI + S+ ++ A +L
Sbjct: 390 DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLL 449
Query: 318 KEAEEKGMLRDPEVCLKLVLMY--IEEGL-----VEKTLDVVESMKNAKLKISDCISCAI 370
K+ E G C + + Y I +GL +E+ +V + M + + +
Sbjct: 450 KDMESTG-------CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++G K + A + Q+IS+G P +TY SI+ YC+ KA + M GF
Sbjct: 503 IDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+ VV Y +++ K GR + A+ ++ M+ KG P YN ++ R N+R
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALS 622
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRA 517
L++EM PD ++Y V R
Sbjct: 623 LFREMAEVGEPPDALTYKIVFRGLCRG 649
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/487 (18%), Positives = 197/487 (40%), Gaps = 49/487 (10%)
Query: 145 IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYY 203
++ + D + L+ V K K+ ++ G + ++ FN+ M + H
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE---KVAALFLE--CKSRKL------ 252
+ +L+ E+M S G+ D + +M+ + + G E +V A LE C + K+
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 253 ---------------------DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
D Y + L ++ ALK M ++G
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG-- 316
Query: 292 EDPSIYA-----SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
DP ++ + +C + E A+ + + ++G L D L+ +E
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEE---AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ LD+ + + ++N K A++++E++ + GC P +VTY ++I
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
+ C + KA + +M+ G + + Y++++ K RI +A + +M +G
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
N +N+L+D + K + L +M + P+ ++Y ++++ Y + +
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM----- 581
NG +D G ++ K + + +K+L+ M+ +G + + Y+ +
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613
Query: 582 -NALRDA 587
N +RDA
Sbjct: 614 RNNIRDA 620
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 142/318 (44%), Gaps = 6/318 (1%)
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI D +Y L+ +++KL E ++ E +G+ D L+ V
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+ ++E M + + + ++ GF + AA++V +++ GC +VT +IN
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260
Query: 409 YCRIALYSKAEKVFIEMQQK---GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
YC++ + E +QQ+ GF+ + Y++ V + + A+ ++ M +G
Sbjct: 261 YCKLG---RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
+P+V+ YN +++ + L + + + +M R PD ++ T+I+A + +
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
+ + G D I++ K+ ++L ++MK+ G DE Y++ ++ L
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437
Query: 586 DAGLQMQAQWLQQNFEGT 603
G +A L ++ E T
Sbjct: 438 SLGKLGKALDLLKDMEST 455
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 160/402 (39%), Gaps = 53/402 (13%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEF------RPEKSTLKLLIRYLVQSK 131
PD +++F++G+ ++ D+ A K+ + P+ T +++ L ++
Sbjct: 284 PDQITYNTFVNGLCQN--------DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG 335
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFN 190
+ + + LPD T + L+A+ C R + + QV + + FN
Sbjct: 336 QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFN 395
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ K+ + + ++E+MK++G D Y +++ +G K L + +S
Sbjct: 396 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 455
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
P ST Y + D L K R EA + F M +GI + + +LI ++
Sbjct: 456 ---GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A L + +G+ + ++ Y ++G ++K D++E+M
Sbjct: 513 DDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT-------------- 558
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
NGF V V VTY ++IN C+ A KV M+ KG
Sbjct: 559 ANGFE--------VDV-------------VTYGTLINGLCKAGRTQVALKVLRGMRIKGM 597
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
AY+ ++ + IRDA+ L +M G P+ Y
Sbjct: 598 RPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTY 639
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 152/326 (46%), Gaps = 4/326 (1%)
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
H+ +L + G + E++ + +M +GI D + +L+ + +V+ A + +
Sbjct: 150 NHLLNVLVE--GSKMKLLESV--YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLE 205
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E +G+ D L+ ++EEG +E L V M + ++NG+ K
Sbjct: 206 EMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLG 265
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A+ +Q I+ G P Q+TY + +N C+ A KV M Q+G D V Y+
Sbjct: 266 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 325
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+V K G++ +A ++ +M +GC P++ +N+L+ L + L +++ +
Sbjct: 326 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
V+PD ++ +I+A + + + ++ + E + +G D ++ L ++ +
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNAL 584
+ LL+DM+S G Y++ ++ L
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGL 471
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 14/267 (5%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ + IL ++L K G AL+ F +MK G D Y +LI + S+ ++ A +L
Sbjct: 390 DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLL 449
Query: 318 KEAEEKGMLRDPEVCLKLVLMY--IEEGL-----VEKTLDVVESMKNAKLKISDCISCAI 370
K+ E G C + + Y I +GL +E+ +V + M + + +
Sbjct: 450 KDMESTG-------CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++G K + A ++ Q+IS+G P +TY SI+ YC+ KA + M GF
Sbjct: 503 IDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+ VV Y +++ K GR + A+ ++ M+ KG P YN ++ R N+R
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALS 622
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRA 517
L++EM PD ++Y V R
Sbjct: 623 LFREMAEVGEPPDALTYKIVFRGLCRG 649
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/519 (18%), Positives = 211/519 (40%), Gaps = 24/519 (4%)
Query: 85 SFLHGMLKDPQTQELAYD----YYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLS 140
+H L + Q+L D N+ + L + + L+ LV+ K + S+
Sbjct: 110 GVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVY 169
Query: 141 EDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKL 199
+ + PD T + L+ + RA + + A +L+ + G F + M G+ +
Sbjct: 170 SEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEE 229
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
+ + V +M G ++ Y K+G E + + + +
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT- 288
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA-----SLICSFASITEVKLAE 314
Y + L ++ ALK M ++G DP ++ + +C + E A+
Sbjct: 289 --YNTFVNGLCQNDHVGHALKVMDVMVQEG--HDPDVFTYNIVVNCLCKNGQLEE---AK 341
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
+ + ++G L D L+ +E+ LD+ + + ++N
Sbjct: 342 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINAL 401
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A++++E++ + GC P +VTY ++I+ C + KA + +M+ G +
Sbjct: 402 CKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRST 461
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ Y++++ K RI +A + +M +G N +N+L+D + K + +L +
Sbjct: 462 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQ 521
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M + P+ ++Y ++++ Y + + NG +D G ++ K +
Sbjct: 522 MISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGR 581
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAM------NALRDA 587
+ +K+L+ M+ +G + + Y+ + N +RDA
Sbjct: 582 TQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 620
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 142/318 (44%), Gaps = 6/318 (1%)
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI D +Y L+ +++KL E ++ E +G+ D L+ V
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+ ++E M + + + ++ GF + AA++V +++ GC +VT +IN
Sbjct: 201 VIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260
Query: 409 YCRIALYSKAEKVFIEMQQK---GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
YC++ + E +QQ+ GF+ + Y++ V + + A+ ++ M +G
Sbjct: 261 YCKLG---RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
+P+V+ YN +++ + L + + + +M R PD ++ T+I+A + +
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
+ + G D I++ K+ ++L ++MK+ G DE Y++ ++ L
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437
Query: 586 DAGLQMQAQWLQQNFEGT 603
G +A L ++ E T
Sbjct: 438 SLGKLGKALDLLKDMEST 455
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 161/402 (40%), Gaps = 53/402 (13%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEF------RPEKSTLKLLIRYLVQSK 131
PD +++F++G+ ++ D+ A K+ + P+ T +++ L ++
Sbjct: 284 PDQITYNTFVNGLCQN--------DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG 335
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFN 190
+ + + LPD T + L+A+ C R + + QV + + FN
Sbjct: 336 QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFN 395
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ K+ + + ++E+MK++G D Y +++ +G K L + +S
Sbjct: 396 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 455
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
P ST Y + D L K R EA + F M +GI + + +LI ++
Sbjct: 456 ---GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A EL + +G+ + ++ Y ++G ++K D++E+M
Sbjct: 513 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT-------------- 558
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
NGF V V VTY ++IN C+ A KV M+ KG
Sbjct: 559 ANGFE--------VDV-------------VTYGTLINGLCKAGRTQVALKVLRGMRIKGM 597
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
AY+ ++ + IRDA+ L +M G P+ Y
Sbjct: 598 RPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTY 639
>gi|410110113|gb|AFV61136.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
filifolia]
Length = 439
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 168/355 (47%), Gaps = 7/355 (1%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 1 GLFDEMRRRALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLI 57
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A +F + G D ++ ++ + L + ++ MK A +
Sbjct: 58 ELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVM 117
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++ + + + + A+ V+ ++ C+ T +I+ Y ++ + +A+K+
Sbjct: 118 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M++ G + VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G+
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ +
Sbjct: 238 TLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQIL 297
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M+ + + + +LL ++K + D +A++ L AG +A ++
Sbjct: 298 FQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYV 348
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 167/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F+ + Y + +
Sbjct: 39 QKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKRSGFTPDLVAYNAMIN 93
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +MK G++ + + Y++L+ + + A +F E E L
Sbjct: 94 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLL 153
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 154 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 213
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 214 RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV 273
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + ++ +++ + RA + ++L E++R PD +
Sbjct: 274 GKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKR----PDNIPR 329
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ + SK + +V++ M+
Sbjct: 330 DTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKXSNVVEVFDKMRG 389
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 390 LGYFPDSDVIAIVLNA 405
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 164/353 (46%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +MK+AG++ ++ Y ++ Y + + ++F
Sbjct: 85 LVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFS 144
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 145 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 199
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M++ ++ +
Sbjct: 200 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPN 259
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G Q+ + ++I AY R L + A+++
Sbjct: 260 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLH 319
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ + + + + GRI +A ++ + G ++ ++ ++ + + K
Sbjct: 320 ELKRPD----NIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYK 375
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + +EFD Y E + G V
Sbjct: 376 KXSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGCV 428
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 139/318 (43%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 118 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E +SR ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 238 TLEHEKANNLIQEMQSRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 294
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
++ ++I ++ V A+ L E L+ P+ + ++I G +E+ V
Sbjct: 295 QILFQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDTAIHILAGAGRIEEATYV 348
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ SK + V+V++++ G P A ++NAY +
Sbjct: 349 FRQAIDAGEVKDITVFERMIHLLSKYKKXSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGK 408
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 409 LQEFDKANDVYMEMQEVG 426
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q + G E + +++ + + K+ ++++K++S+G+ +D + ++
Sbjct: 244 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIV 303
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P T ++ L +GR EA FR + G
Sbjct: 304 AYERAGLVAHAKRLLHELK--RPDNIPRDTAIH-----ILAGAGRIEEATYVFRQAIDAG 356
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I + + E+F + G D +V ++ Y + +K
Sbjct: 357 EVKDITVFERMIHLLSKYKKXSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKAN 416
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 417 DVYMEMQEVGCVFSD 431
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 165/348 (47%), Gaps = 2/348 (0%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA--SITEVKLAEE 315
+ ++ + +SGR +A + M+++ I D + +LI + A +A E
Sbjct: 60 TVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALE 119
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L E + G+ D L+ + ++ + V E M ++ + A+V+
Sbjct: 120 LLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHG 179
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ A ++++L+ +G P VTY S++ A+ + + E+V E+ + GF K +
Sbjct: 180 RCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGI 239
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y++M+ MYGK GR+ A+ L +M+A GC P+ Y L+D G+ + + K+ +EM
Sbjct: 240 TYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEM 299
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ P V+++ +I AY ++ D + ++ +G DR +M+ VF++ +
Sbjct: 300 ADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDET 359
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
+L+ L + M +G K D+ LY + AL + + + Q+ E
Sbjct: 360 RKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAV 407
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 174/390 (44%), Gaps = 9/390 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ M+ GIV Y I+ ++G E L + + S + I +
Sbjct: 539 VFCDMQFLGIVPSQKIYQSIIYTCCRLGFPETAYQLMDDAARSDISLNILSCRVAMI--E 596
Query: 268 SLGKSGRAFEALKFFRDMK-EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ GK +A F + +K E G+ D I+ +LI ++A + A +F +KG L
Sbjct: 597 AYGKLKLWQQAENFVKGLKQESGV--DRRIWNALIHAYAESGLYEHARAIFDIMIKKGPL 654
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
E ++ I +G +++ VV+ +++ +KIS ++ F+K + +K+
Sbjct: 655 PTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKI 714
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
Y + + G +P Y +I+ C + E + EM+ GF +V ++++ MY
Sbjct: 715 YNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTG 774
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE--KLWKEMERRKVTPDK 504
TG + + + G EP+ YN+L+ M+ R N R E L EM +R +TP
Sbjct: 775 TGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSR--NFRPEEGFTLLYEMGKRGLTPKL 832
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
SY +++A +A+ ++ + E R G ++R+I +M+ ++ + LL
Sbjct: 833 ESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSA 892
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
MK +G + H M + +G +A+
Sbjct: 893 MKEDGIEPTIATMHILMTSYGTSGHPDEAE 922
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 148/324 (45%), Gaps = 6/324 (1%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY---ASLICSFASITEVKLAEELFKEA 320
++ ++ K+G FE +K + MK G L + +Y SL+C +V+L + E
Sbjct: 697 LMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVEL---MVAEM 753
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
E G D V L+LMY G ++T++V S+ A L+ + ++ +S+
Sbjct: 754 EGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRP 813
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
+ ++ +G P +Y ++ A + L+ +A+ +F EM+ KG+ Y M
Sbjct: 814 EEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMM 873
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ +Y A L++ MK G EP + + LM +G + + + EK+ ++ +
Sbjct: 874 MKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNL 933
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
+ Y+TV+ AY R R++ + + E + +G D + + S Q ++ +
Sbjct: 934 EISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAIL 993
Query: 561 LLQDMKSEGTKLDERLYHSAMNAL 584
LL+ ++ G L RL ++L
Sbjct: 994 LLKSLQDCGFDLPIRLLTERTSSL 1017
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 212/496 (42%), Gaps = 27/496 (5%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFK-IYNVLPDAHTCSRLVASCVRARKFKIA 171
++P+ ++L+ L + + D I + +D + ++ + P + + A C+ +
Sbjct: 374 YKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAECISQGASLLK 433
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSA---GIVLDSGCYCQIM 228
LQ + DG+ L S + Y K+ + + + E ++ L S C ++
Sbjct: 434 RACLQGYEPDGKSLL----SILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISECSIMLL 489
Query: 229 EAYYKIGDSEKVAALFLECKSRK--LDSTPFSTH--MYKILCDSLGKSGRAFEALKFFRD 284
KI D+ ++ SRK L F +Y+ L L ++ EA + F D
Sbjct: 490 CKNGKIVDA-------IQEYSRKQMLKRGSFGQDCDLYEYLITYLEEAELFPEACQVFCD 542
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC-LKLVLMYIEEG 343
M+ GI+ IY S+I + + + A +L +A + + C + ++ Y +
Sbjct: 543 MQFLGIVPSQKIYQSIIYTCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKLK 602
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
L ++ + V+ +K + I A+++ +++ Y A +++ +I +G +P T
Sbjct: 603 LWQQAENFVKGLKQES-GVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLP---TVE 658
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM---YGKTGRIRDAMWLVAKM 460
S+ + + + +++++ +Q+ ++ S+++ M + K G + + M + M
Sbjct: 659 SVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGM 718
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
KA G PN+ +Y ++ + K R VE + EME PD V T++ Y F
Sbjct: 719 KAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNF 778
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
D ++ Y+ G D ++ ++S+ + EE LL +M G Y
Sbjct: 779 DRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKIL 838
Query: 581 MNALRDAGLQMQAQWL 596
+ A A L QA L
Sbjct: 839 LAASGKAKLWEQADLL 854
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/248 (18%), Positives = 93/248 (37%), Gaps = 72/248 (29%)
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG------- 448
+P + +++ Y R + A ++ M+ + + +V++++++ K+G
Sbjct: 58 LPTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVA 117
Query: 449 ------------------------------RIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+ DA+ + +M A C P++W YN+++ +
Sbjct: 118 LELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSV 177
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKV--------------------------------- 505
HGR ++ E ++KE+ + PD V
Sbjct: 178 HGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKD 237
Query: 506 --SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+Y T+I Y + D+ + Y+E R G D ++V K+ +I E K+L+
Sbjct: 238 GITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLE 297
Query: 564 DMKSEGTK 571
+M G K
Sbjct: 298 EMADAGLK 305
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 108/560 (19%), Positives = 229/560 (40%), Gaps = 46/560 (8%)
Query: 74 QTAVPDAKKFDSFLHGMLKDP-QTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
Q PD F++ ++ K +A + +E ++ RP+ T LI Q
Sbjct: 90 QDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQ-AGLRPDAITYNTLISACSQGSN 148
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNS 191
D V++ E+ PD T + +V+ R K + A + + + G + + +NS
Sbjct: 149 LDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNS 208
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ + K V E++ AG D Y ++ Y K+G + L+ E R
Sbjct: 209 LLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEM--RA 266
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
+ TP + Y +L DSLGK R EA K +M + G+ +++LIC++A
Sbjct: 267 IGCTPDAV-TYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQD 325
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
AE F E G+ D L ++ ++ K + + +M K D + ++
Sbjct: 326 DAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLL 385
Query: 372 NGFSKRRGY--------------------WAAVKVYEQLISQG-------CI----PGQV 400
+K + +++ + + ISQG C+ P
Sbjct: 386 AALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAECISQGASLLKRACLQGYEPDGK 445
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK- 459
+ SI++AY ++ + K + ++Q + + + + K G+I DA+ ++
Sbjct: 446 SLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISECSIMLLCKNGKIVDAIQEYSRK 505
Query: 460 --MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+K + +Y L+ A+ + +++ +M+ + P + Y ++I R
Sbjct: 506 QMLKRGSFGQDCDLYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKIYQSIIYTCCRL 565
Query: 518 REFDMCVKFYNEF---RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ + ++ ++ ++ +A M+ + KL ++ ++ +K E + +D
Sbjct: 566 GFPETAYQLMDDAARSDISLNILSCRVA--MIEAYGKLKLWQQAENFVKGLKQE-SGVDR 622
Query: 575 RLYHSAMNALRDAGLQMQAQ 594
R++++ ++A ++GL A+
Sbjct: 623 RIWNALIHAYAESGLYEHAR 642
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/132 (19%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR--EFDMCV 524
P V ++N++M ++ R+ +L M + + PD VS+ T+I+A ++ + +
Sbjct: 59 PTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 118
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ +E R G D ++ S+ S +++ V + ++M + + D Y++ ++
Sbjct: 119 ELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVH 178
Query: 585 RDAGLQMQAQWL 596
G +A+ +
Sbjct: 179 GRCGKAQEAELM 190
>gi|440800754|gb|ELR21789.1| pentatricopeptide repeat domain/PPR repeatcontaining protein
[Acanthamoeba castellanii str. Neff]
Length = 559
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 174/378 (46%), Gaps = 9/378 (2%)
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
+++ Y + GD +++A + + R++ P Y IL D+ GK+G + + DM+
Sbjct: 104 LLQGYGRAGDRQRLAQV--QRDMREVGVRP-GMSTYTILIDAWGKAGDLRRMWQAWEDMR 160
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK---GMLRDPEVCLKLVLMYIEEG 343
E+G+ + +Y S+I + + +V E F E + G+ + +V Y ++
Sbjct: 161 EQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYGQQQ 220
Query: 344 LVEKTLDVVESMK-NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
+++K +VE M+ + L + + A+V +S+ A++ ++ + + G P +
Sbjct: 221 MMDKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAW 280
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+I++ + + +M++ G Y++++ +GK I M M+
Sbjct: 281 TAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRR 340
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
G +V YN+L+D + + EK + M+R + P + +++ AY RA +F+
Sbjct: 341 DGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTRADQFEK 400
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL-QDMKSEGTKLDERLYHSAM 581
++ + + G D + +++ + ++ + EE K+L MK G L+ + S +
Sbjct: 401 VLRLISRMKKEGRAPDNVVFNLLIDTYGRMGKPEEAEKVLCGAMKEYGIALETNNFTSVI 460
Query: 582 NAL-RDAGLQMQAQWLQQ 598
A R+ L +WL +
Sbjct: 461 EAWARNGNLDKAEEWLHR 478
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 153/327 (46%), Gaps = 4/327 (1%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P ++ +L G++G + RDM+E G+ S Y LI ++ +++ +
Sbjct: 95 PVPLAVFDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQ 154
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLV---EKTLDVVESMKNAKLKISDCISCAIVN 372
+++ E+G+ + V ++ + G V E+T ++ ++ + A+V+
Sbjct: 155 AWEDMREQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVH 214
Query: 373 GFSKRRGYWAAVKVYEQLISQ-GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ +++ + E++ + G T+++++ A+ R KA + F + G
Sbjct: 215 SYGQQQMMDKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQ 274
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ A+++++ M G GR + + + KMK G +P+ +YN++++ G+A+N+ +
Sbjct: 275 PSLHAWTAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDT 334
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+K M R V D +Y T+I + + + KFY + G ++ +++
Sbjct: 335 FKAMRRDGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTR 394
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYH 578
Q E++++L+ MK EG D +++
Sbjct: 395 ADQFEKVLRLISRMKKEGRAPDNVVFN 421
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ + ++ YG+ G + + M+ G P + Y L+D G+A +LR++ + W+
Sbjct: 98 LAVFDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWE 157
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG---VIDRAIAGIMVGVFS 550
+M + + P+ V YT+VI+ + + + + E + + G +R MV +
Sbjct: 158 DMREQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYG 217
Query: 551 KLSQIEELVKLLQDMKSE-GTKLDERLYHSAMNA 583
+ ++++ L++ M+++ G LD HSA+ A
Sbjct: 218 QQQMMDKMEALVERMRADPGLGLDN-FTHSAVVA 250
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/496 (19%), Positives = 212/496 (42%), Gaps = 15/496 (3%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVS 138
D+ F L G+ + + L +E + P+ L ++ L ++ + ++
Sbjct: 9 DSSTFAVVLRGLHASAKLRHLGPLLLDEIRDR-GLSPDPVELNTILAELCDARDTTTAMA 67
Query: 139 LSEDFKIYNVLPDAHTCS-RLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L + K+ + HT L+ +AR A LL + G L N +GG
Sbjct: 68 LFD--KMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGL 125
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + VY +M A D Y +++ K G + E S + P
Sbjct: 126 CRAGRLRHALGVYRQMNDAHPP-DFLTYTKLVHGLSKAGRLRDAVQVLQEMVSAR--HVP 182
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+T + ++ SL R +A + +M +G+ + Y++L+ + A L
Sbjct: 183 DNTTL-TVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVAL 241
Query: 317 F-KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
E +G D ++ + G + +D+ E M A I+ +++ G+
Sbjct: 242 LLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAIT---YNSLIGGYC 298
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ A+++ +++ C P +TY ++++A+C++ A ++F +M VV
Sbjct: 299 RAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVV 358
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
++S+V GR+ DA+ L+ ++ +GC P ++ YN ++D + ++ +R+ E+L +
Sbjct: 359 TFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADF 418
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA--GIMVGVFSKLS 553
R P+ V+Y +++ RA D +++ ++ GG ++A I++ +
Sbjct: 419 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDG 478
Query: 554 QIEELVKLLQDMKSEG 569
+ ++ V+ ++M G
Sbjct: 479 RTDDAVQFYEEMIQRG 494
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 153/359 (42%), Gaps = 7/359 (1%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
E+M G+ ++ Y +++ K ++ AL L +R+ + T Y + D L
Sbjct: 208 EEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVT--YSTVIDGL 265
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
K+GR +A+ F +M Y SLI + ++ A L + + D
Sbjct: 266 CKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDV 322
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
L+ + + G ++ ++ + M KL ++V+G A+++ E+
Sbjct: 323 ITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEE 382
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ +GC P TY +++ YC+ KAE++ + + +GF V Y+ +VA + GR
Sbjct: 383 ITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGR 442
Query: 450 IRDAMWLVAKMKAKG--CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
A+ + ++ ++G C +V +Y ++D R + ++EM +R P ++
Sbjct: 443 TDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 502
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
TV+ A +A + + E G +V + + I++ +L +++
Sbjct: 503 ATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 169/422 (40%), Gaps = 10/422 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T L+ L ++ + V + ++ +PD T + +V S + A L
Sbjct: 147 PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAREL 206
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTI-LVYEKMKSAGIVLDSGCYCQIMEAYY 232
++ + G A + +++ + G K + L+ ++ G D Y +++
Sbjct: 207 VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLC 266
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K G +F E + P + Y L ++G EA++ M +
Sbjct: 267 KAGRLRDAVDIFEE-----MSCAPTAI-TYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAP 320
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
D Y +L+ +F + + A ELF++ + D LV EG +E L+++
Sbjct: 321 DVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELL 380
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
E + + +V+G+ K A ++ S+G +P VTY ++ CR
Sbjct: 381 EEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRA 440
Query: 413 ALYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+A + ++ +G V Y+ ++ + GR DA+ +M +G P
Sbjct: 441 GRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAA 500
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+ +++ +A +Q +L +EM + TP + V+SAY RA + +E
Sbjct: 501 TFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560
Query: 531 RM 532
R+
Sbjct: 561 RL 562
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/424 (20%), Positives = 173/424 (40%), Gaps = 16/424 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR--PEKSTLKLLIRYLVQSKKWDS 135
PD + +HG+ K + + D +++ R P+ +TL ++++ L + D
Sbjct: 147 PDFLTYTKLVHGLSKAGRLR----DAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDD 202
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAM 193
L E+ + +A T S LV + + A LL +T ++ +++ +
Sbjct: 203 ARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVI 262
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G K + ++E+M A + Y ++ Y + GD ++ L + D
Sbjct: 263 DGLCKAGRLRDAVDIFEEMSCAPTAIT---YNSLIGGYCRAGDMDEAIRLLGKMVD---D 316
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+ Y L + K GR +A + F+ M + D + SL+ ++ A
Sbjct: 317 NCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDA 376
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
EL +E +G +V Y + V K ++V ++ + +V G
Sbjct: 377 LELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAG 436
Query: 374 FSKRRGYWAAVKVYEQLISQG--CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ A++ +QL S+G C YA I++A CR A + + EM Q+G+
Sbjct: 437 CCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYV 496
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
++++V K + + A L+ +M G P ++++ + RA +++ ++L
Sbjct: 497 PAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 556
Query: 492 WKEM 495
E+
Sbjct: 557 ASEL 560
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 92/214 (42%), Gaps = 9/214 (4%)
Query: 378 RGYWAAVKV-------YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
RG A+ K+ +++ +G P V +I+ C + A +F +M + G
Sbjct: 18 RGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGA 77
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
Y +++ K + +AM L+ MK++G P ++N ++ RA LR
Sbjct: 78 VN-HTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALG 136
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
++++M PD ++YT ++ ++A V+ E V D ++V
Sbjct: 137 VYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLC 195
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++++ +L+++M G + Y + ++ L
Sbjct: 196 LGDRVDDARELVEEMLHRGMAANAITYSALVDGL 229
>gi|410110067|gb|AFV61113.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
herrerae]
Length = 433
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 155/322 (48%), Gaps = 3/322 (0%)
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 2 EMRERALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 58
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ + A +F + G + D ++ ++ + L + ++ MK A + +
Sbjct: 59 KLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTA 118
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++ + + + + A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M
Sbjct: 119 SYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
++ G + VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G+
Sbjct: 179 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 238
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ + M
Sbjct: 239 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 298
Query: 546 VGVFSKLSQIEELVKLLQDMKS 567
+ + + + +LL ++KS
Sbjct: 299 IVAYERAGLVAHAKRLLHELKS 320
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 151/316 (47%), Gaps = 6/316 (1%)
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+M+E+ + D Y++LI F A ++ E+ + D + L+ + +
Sbjct: 2 EMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 61
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
K + + +K + A++N F K + + A + ++ + G +P +Y+
Sbjct: 62 DYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYS 121
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS---MVAMYGKTGRIRDAMWLVAKM 460
+++ Y + +A VF EM++ KC++ ++ M+ +YG+ G ++A L M
Sbjct: 122 TLLTMYVENKKFIEALSVFSEMREI---KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ G EPNV YN+L+ ++G A+ + L++ M+R+ + + V+Y +++ Y + E
Sbjct: 179 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 238
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ E + G + ++ ++ K+ +++ L Q ++S G ++D+ LY +
Sbjct: 239 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 298
Query: 581 MNALRDAGLQMQAQWL 596
+ A AGL A+ L
Sbjct: 299 IVAYERAGLVAHAKRL 314
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 167/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F + Y + +
Sbjct: 36 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKRSGFMPDLVAYNAMIN 90
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +MK G++ + + Y++L+ + + A +F E E L
Sbjct: 91 VFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVENKKFIEALSVFSEMREIKCLL 150
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 151 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 210
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 211 RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV 270
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + +Y +++ + RA + ++L E++ +PD +
Sbjct: 271 GKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----SPDNIPR 326
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ +FSK + +V++ M+
Sbjct: 327 DTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRG 386
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 387 LGYFPDSNVIALVLNA 402
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 188/423 (44%), Gaps = 12/423 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T LI + + +D+ +S + + V D S L+ + + A ++
Sbjct: 10 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 69
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G + L+A+N+ + + K ++ + +MK+AG++ ++ Y ++ Y +
Sbjct: 70 FSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVE 129
Query: 234 IGDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ ++F E + K LD T + I+ D G+ G A EA K F M++ GI
Sbjct: 130 NKKFIEALSVFSEMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIE 184
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y +L+ + A LF+ + K + ++ ++++Y + EK ++
Sbjct: 185 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 244
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++ M+N ++ + I++ + K A ++++L S G QV Y ++I AY R
Sbjct: 245 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYER 304
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
L + A+++ E+ K D + + + + GRI +A ++ + G ++ +
Sbjct: 305 AGLVAHAKRLLHEL--KSPDN--IPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITV 360
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+ ++ + + K V +++ +M PD V++AY + E D Y E +
Sbjct: 361 FERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHELDKANDVYMEMQ 420
Query: 532 MNG 534
G
Sbjct: 421 EVG 423
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 106/212 (50%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 10 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 69
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM+ V P+ SY+T+++ Y
Sbjct: 70 FSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVE 129
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + ++E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 130 NKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 189
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 190 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 221
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 152/362 (41%), Gaps = 24/362 (6%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ +I ++K + +L + K V+P+ + S L+ V +KF A
Sbjct: 78 FMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVENKKFIEA- 136
Query: 173 TLLQVFITDGEIA----LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
L VF EI L N + Y +L M ++ M+ GI + Y ++
Sbjct: 137 --LSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLL 194
Query: 229 EAYYKIGDSE---KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
Y GD+E + LF + + ++ + Y + GK+ +A ++M
Sbjct: 195 RVY---GDAELFGEAIHLFRLMQRKNIEQNVVT---YNSMMMIYGKTLEHEKANNLIQEM 248
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+ +GI + Y+++I + + ++ A LF++ G+ D + +++ Y GLV
Sbjct: 249 QNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLV 308
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
++ +K+ I + I+ G + A V+ Q I G + + +
Sbjct: 309 AHAKRLLHELKSPD-NIPRDTAIHILAGAGRIE---EATYVFRQAIDAGEVKDITVFERM 364
Query: 406 INAYCRIALYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
I+ + + Y+ +VF +M+ G+ D V+A ++ YGK + A + +M+
Sbjct: 365 IHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIAL--VLNAYGKLHELDKANDVYMEMQEV 422
Query: 464 GC 465
GC
Sbjct: 423 GC 424
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 241 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIV 300
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E KS D+ P T ++ L +GR EA FR + G
Sbjct: 301 AYERAGLVAHAKRLLHELKSP--DNIPRDTAIH-----ILAGAGRIEEATYVFRQAIDAG 353
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + ++K
Sbjct: 354 EVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHELDKAN 413
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 414 DVYMEMQEVGCIFSD 428
>gi|255661144|gb|ACU25741.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 426
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 161/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G + D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 152/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G + D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G+ + L+ MY+E + L V M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALI 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 189/425 (44%), Gaps = 12/425 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T LI + + +D+ +S + + V D S L+ + + A ++
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G + L+A+N+ + + K ++ + +M++AG+ ++ Y ++ Y +
Sbjct: 67 FSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVE 126
Query: 234 IGDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ ++F E + K LD T + I+ D G+ G A EA K F M++ GI
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y +L+ + A LF+ + K + ++ ++++Y + EK ++
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++ M+N ++ + I++ + K A ++++L S G QV Y ++I AY R
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYER 301
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
L + A+++ E+++ +A + + GRI +A W+ + G ++ +
Sbjct: 302 AGLVAHAKRLLHELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+ ++ + + K V +++ +M PD +++AY + EFD Y E +
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQ 417
Query: 532 MNGGV 536
G V
Sbjct: 418 EVGCV 422
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 181/436 (41%), Gaps = 6/436 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P +++ LH K + Q A D + ++ + P + T +LI L + +
Sbjct: 235 PTVTTYNTMLHSFCKGGEVQR-ALDLVPKMQERGCY-PSEVTFNVLINGLSKKGELQQAK 292
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA-FNSAMGGY 196
L ++ + +T + L+ + A L + +T G +A N+ M G+
Sbjct: 293 GLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGF 352
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K M ++ D Y ++ + ++G+ + L E + R L
Sbjct: 353 CKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLS--- 409
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
F+ Y L D L + G ALK DM +GI D Y L+ + + +A+E
Sbjct: 410 FNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEF 469
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F E G+ D ++ ++ G K + E M VNG K
Sbjct: 470 FDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCK 529
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A ++ +++I G +P VTY S ++A+ + ++F +M +G VV
Sbjct: 530 LGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVT 589
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y+ ++ + GR+ AM +M+ KG PNV YN L++ + + + Q K + EM+
Sbjct: 590 YTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQ 649
Query: 497 RRKVTPDKVSYTTVIS 512
+ + P+K +YT +I+
Sbjct: 650 EKGIFPNKYTYTILIN 665
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 205/496 (41%), Gaps = 32/496 (6%)
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
R+L K + I+ + D N+L A R++ NT+L F GE+
Sbjct: 197 RFLPDVKNCNRILKILRD---KNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEV 253
Query: 185 -----------------ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQI 227
+ + FN + G +K + ++M AG+ + Y +
Sbjct: 254 QRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPL 313
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFS--THMYKILCDSLGKSGRAFEALKFFRDM 285
+ Y K G + AL+ E +R + T S T MY K G+ +A + DM
Sbjct: 314 ICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMY-----GFCKEGKMSDARQQLSDM 368
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+K ++ D Y +LI F + + A L E + + + L+ G +
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL 428
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
E L + E M N + +VNG K A + +++++ G P Q Y +
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTAR 488
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
I ++ +KA K+ EM KGF V+ Y+ V K G + +A L+ KM G
Sbjct: 489 IVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGH 548
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
P+ Y S M H +LR+ +++ +M R TP V+YT +I A+ D +
Sbjct: 549 VPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMA 608
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
++ E + G V + +++ F K+ ++++ K +M+ +G ++ Y +N
Sbjct: 609 YFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENC 668
Query: 586 DAG-----LQMQAQWL 596
+ G L++ AQ L
Sbjct: 669 NMGKWQEALRLYAQML 684
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 166/409 (40%), Gaps = 33/409 (8%)
Query: 193 MGGYNKLHMYYSTILVYEKM-------------KSAGIVLDSGCYCQIMEAYYKIGDSEK 239
+GGY + Y +LV+EKM + I+ D + +E Y +G
Sbjct: 178 IGGY----LNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMG---- 229
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
E R +T Y + S K G AL M+E+G +
Sbjct: 230 ------EYGIRPTVTT------YNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNV 277
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
LI + E++ A+ L +E + G+ P L+ Y ++GL+ + L + E M
Sbjct: 278 LINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRG 337
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+ + I+ GF K A + ++ + +P ++Y ++I +CR+ +A
Sbjct: 338 VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAF 397
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
+ E++ + +V Y++++ + G + A+ L M +G P+V Y L++
Sbjct: 398 ILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGA 457
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+ N+ ++ + EM + PD+ +YT I + + K E G D
Sbjct: 458 CKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDV 517
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ V KL +EE +LLQ M +G D Y S M+A + G
Sbjct: 518 ITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENG 566
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 121/279 (43%)
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F++ L D + C +++ + ++ L+ K L+V M ++ + +++ F
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A+ + ++ +GC P +VT+ +IN + +A+ + EM + G
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+ ++ Y K G + +A+ L +M +G P V +N++M + + + +M
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
++ + PD +SY T+I + R +E R + ++ +L +
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL 428
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
E +KL +DM + G D Y +N G + A+
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAK 467
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/509 (21%), Positives = 224/509 (44%), Gaps = 32/509 (6%)
Query: 110 LPEF--RPEKSTLKLLIRYL-VQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRAR 166
+P+F P+ T +LI + + W +I L + V P T + ++ + R
Sbjct: 273 MPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVR-SGVEPSVATFTTILHALCREG 331
Query: 167 KFKIANTLLQVFITDGEIALLA--FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
A L I D IA A +N+ M GY K L+YE+M++ G+ D +
Sbjct: 332 NVVEARKLFDG-IQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTF 390
Query: 225 CQIMEAYYKIG---DSEK------VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
++ +YK G DS++ V+ LFL+ + +Y ++ SL +GR
Sbjct: 391 NILVWGHYKYGRIEDSDRLLKDLIVSGLFLD------------SSLYDVMVSSLCWAGRL 438
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
EA+K +++ EKG+ + SLI +++ A E ++ G C L
Sbjct: 439 DEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSL 498
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
++ +G +++ ++ M I+ +++G+ K A +++++ +G
Sbjct: 499 LMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGI 558
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P V + ++I+ + +A +VF+EM GF AY+S++ GR+ +A+
Sbjct: 559 YPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALK 618
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L +M+ KG + + +N ++D R ++ + + +M+R + PD ++ +I Y
Sbjct: 619 LEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYC 678
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+A + + N+ G D + + ++ ++ + V +L + S G D
Sbjct: 679 KAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTV 738
Query: 576 LYHSAMNA----LRDAGLQMQAQWLQQNF 600
Y++ ++ + D + + A+ L+ F
Sbjct: 739 TYNTMLSGICSDILDRAMILTAKLLKMGF 767
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 108/225 (48%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
A++ GF ++ + + C P VT+ +INA C A M +
Sbjct: 252 AMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRS 311
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G + V +++++ + G + +A L ++ G PN IYN+LMD + +A+ + Q
Sbjct: 312 GVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQA 371
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
L++EM V+PD V++ ++ + + + + + ++G +D ++ +MV
Sbjct: 372 SLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSS 431
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+++E +KLLQ++ +G L ++S + A AGL+ +A
Sbjct: 432 LCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKA 476
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%)
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
Y + K+++ +I +G P +T+ ++I +CR E + M + VV ++
Sbjct: 228 YGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNI 287
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ GR A+ + M G EP+V + +++ R N+ + KL+ ++
Sbjct: 288 LINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMG 347
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ Y T++ Y +ARE Y E R G D I+V K +IE+
Sbjct: 348 IAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSD 407
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+LL+D+ G LD LY +++L AG +A L Q
Sbjct: 408 RLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQ 446
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 124/304 (40%), Gaps = 38/304 (12%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
P + TC+ L+ R + A LL + G I +A+ + GY K++ +
Sbjct: 490 PSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFL 549
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+++MK GI D+ + +++ K G+ E+ +FLE + F+ Y L
Sbjct: 550 WKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFA---YNSLIRG 606
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L GR EALK ++M++KG+L D + +I F ++K A E F + + G+L D
Sbjct: 607 LCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPD 666
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ Y + + ++V M + L ++G+ + R AV + +
Sbjct: 667 IFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILD 726
Query: 389 QLISQGC----------------------------------IPGQVTYASIINAYCRIAL 414
QLIS G IP +T +++ +C+ +
Sbjct: 727 QLISAGIVPDTVTYNTMLSGICSDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGM 786
Query: 415 YSKA 418
KA
Sbjct: 787 PEKA 790
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 17/274 (6%)
Query: 7 SSSDCSSALINTTYTCMKKSYRHTLFSTC-KAFPFVTVNPSSIINHRFFQVNASTNFPTI 65
SSS C+S L+ + R L+ K FP V + +++ +F++N N
Sbjct: 491 SSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDG-YFKMN---NLEGA 546
Query: 66 E-LNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+ L ++ + PDA F + + G+ K +E AY+ + E + F P LI
Sbjct: 547 QFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEE-AYEVFLEMSAI-GFVPNNFAYNSLI 604
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
R L + + L ++ + +L D T + ++ R + K A ++ F+ I
Sbjct: 605 RGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFA---IETFLDMQRI 661
Query: 185 ALL----AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
LL FN +GGY K + KM S G+ D Y M Y ++ +
Sbjct: 662 GLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQA 721
Query: 241 AALFLECKSRKL--DSTPFSTHMYKILCDSLGKS 272
+ + S + D+ ++T + I D L ++
Sbjct: 722 VIILDQLISAGIVPDTVTYNTMLSGICSDILDRA 755
>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 903
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 151/326 (46%), Gaps = 1/326 (0%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA-SLICSFASITEVKLAEELFKEAEE 322
I+ ++ + G+ +A+ F ++M LE + SLI +A I +V+ + + E
Sbjct: 230 IVVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYAMIGDVEGMTRVLRLMSE 289
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
+G+ R+ L+ Y ++GL+E+ V E + KL + +++G+ +
Sbjct: 290 RGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRNGRICD 349
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
AV+V++ +I G S+IN YC+ +AE++ M Y+++V
Sbjct: 350 AVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVD 409
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
Y + G + +A+ L +M K P V YN L+ + R V LWK M +R VT
Sbjct: 410 GYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTA 469
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+++S +T++ A + +FD +K + G + D +M+ K+ ++ E ++L
Sbjct: 470 NEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL 529
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAG 588
++ K D + Y + + + G
Sbjct: 530 DNVNIFRCKPDVQTYQALSHGYYNVG 555
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/458 (19%), Positives = 197/458 (43%), Gaps = 7/458 (1%)
Query: 131 KKWDSIVSLS--EDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG--EIAL 186
KK ++ V+L + + V PD TCS +V + R K A + E+ +
Sbjct: 202 KKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRCGKVDKAMAFAKEMDNSLGLELNV 261
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ NS + GY + V M G+ + + ++++Y K G E+ +F
Sbjct: 262 VTCNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFEL 321
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+KL P HM+ +L D ++GR +A++ M E G+ + +I SLI +
Sbjct: 322 VTEKKL--VP-DQHMHGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCK 378
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
++ AE++ + + D LV Y G V++ L + M ++ +
Sbjct: 379 SGQLVEAEQILTRMNDWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMT 438
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
++ G+S+ + + +++ ++ +G +++ ++++ A ++ + +A K++ +
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENVL 498
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+G + + M++ K ++ +A ++ + C+P+V Y +L + NL+
Sbjct: 499 ARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNVGNLK 558
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ + ME++ + P Y T+IS + + + E R G A G ++
Sbjct: 559 EAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPTVATYGALI 618
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + I++ +M +G L+ + N+L
Sbjct: 619 TGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSL 656
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 85/496 (17%), Positives = 185/496 (37%), Gaps = 84/496 (16%)
Query: 146 YNVLPDAHTCSRLVASCVRA----RKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHM 201
+++ PD HT + LV RA K+ + Q + ++ +N + GY+++
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVP---TVMTYNILLKGYSRIGA 451
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
++ + +++ M G+ + ++EA +K+GD +
Sbjct: 452 FHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFD----------------------- 488
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
EA+K + ++ +G+L D +I + +V A+E+
Sbjct: 489 ---------------EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVN 533
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
D + L Y G +++ V + M+ + + + +++G K +
Sbjct: 534 IFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLN 593
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+ +L ++G P TY ++I +C I + KA EM +KG V S +
Sbjct: 594 KVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIA 653
Query: 442 AMYGKTGRIRDAMWLVAKM-------------------KAKGC----------------- 465
+ + +A L+ K+ A C
Sbjct: 654 NSLFRLDKFDEACLLLQKIVDFDLLLPGYQSLKEFLEPSATTCLKTQKIAESVENSTPKK 713
Query: 466 --EPNVWIYNSLMDMHGRAKNLRQVEKLWKEM-ERRKVTPDKVSYTTVISAYNRAREFDM 522
PN +YN + +A L +KL+ ++ + PD+ +YT +I + +
Sbjct: 714 LLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGDINK 773
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+E + G + + ++ KL ++ +LL+ + +GT + Y++ ++
Sbjct: 774 AFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAITYNTLID 833
Query: 583 ALRDAGLQMQAQWLQQ 598
L +G +A L++
Sbjct: 834 GLIKSGDVAEAMRLKE 849
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 166/390 (42%), Gaps = 32/390 (8%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITD 181
L+ L + +D + L E+ +L D T + +++ + K A +L V I
Sbjct: 477 LLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 536
Query: 182 GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ + + + GY + V + M+ GI Y ++ +K KVA
Sbjct: 537 CKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVA 596
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
L +E ++R L TP + Y L G +A +M EKGI + +I
Sbjct: 597 DLVIELRARGL--TP-TVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNI----- 648
Query: 302 CSFASITEVKLAEELFK--EAEEKGMLRDPEVCLKLVLM-------YIEEGLVE--KTLD 350
CS K+A LF+ + +E +L V L+L ++E KT
Sbjct: 649 CS-------KIANSLFRLDKFDEACLLLQKIVDFDLLLPGYQSLKEFLEPSATTCLKTQK 701
Query: 351 VVESMKNA---KLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQG-CIPGQVTYASI 405
+ ES++N+ KL + + I + + G K A K++ L+S IP + TY +
Sbjct: 702 IAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTIL 761
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
I+ +KA + EM KG +V Y++++ K G + A L+ K+ KG
Sbjct: 762 IHGCAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGT 821
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
PN YN+L+D ++ ++ + +L ++M
Sbjct: 822 TPNAITYNTLIDGLIKSGDVAEAMRLKEKM 851
>gi|449499684|ref|XP_004160885.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Cucumis sativus]
Length = 693
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 187/446 (41%), Gaps = 6/446 (1%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSED 142
F+ + G+ E A + ++ + + P K L L +S L +
Sbjct: 189 FNVLMDGLCNQGFMGE-ALELFDIMQSTNGYPPTLHLFKTLFYGLCKSGWLVEAELLIRE 247
Query: 143 FKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHM 201
+ ++ PD + L+ R RK K+A L + G + NS + G+ KL +
Sbjct: 248 MEFRSLYPDKTMYTSLIHGYCRDRKMKMAMQALFRMVKIGCKPDTFTLNSLIHGFVKLGL 307
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
LVY+ M+ GI D + ++ Y + G + + S L S H
Sbjct: 308 VEKGWLVYKLMEDWGIQPDVVTFHIMIGKYCQEGKVDSALMILNSMVSSNLSP---SVHC 364
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L +L ++GR E + M + GI+ D ++ +L+ + E++LA + +
Sbjct: 365 YTVLSSALYRNGRLEEVDGLLKGMLDNGIIPDHVLFLTLMKMYPKGHELQLALNILETIV 424
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ G DP V L L +K V++ + + L ++ +++ + +
Sbjct: 425 KNGCGCDPSVILASAEWQTSSNLEQKFEIVLKEISISDLNLAGVAFSIVISALCETENFC 484
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+ ++S GC P TY S+I C+ L+ A + M+ Y +V
Sbjct: 485 YALDYLHNMVSLGCKPLLFTYNSLIRRLCKERLFEDAMSLIDHMKDYSLFPNTTTYLIIV 544
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y + G + A + KM+ G +P+V IY+S++ R K + + E ++K M +
Sbjct: 545 NEYCRQGNVTAAYHTLRKMRQVGLKPSVAIYDSIIRCLSREKRICEAEVVFKMMLEAGMD 604
Query: 502 PDKVSYTTVISAYNR-AREFDMCVKF 526
PDK Y T+I Y++ R + C F
Sbjct: 605 PDKKFYLTMIKGYSKNGRILEACELF 630
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 138/330 (41%), Gaps = 17/330 (5%)
Query: 217 IVLDS--GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGR 274
++LDS C+C ++G E+ + F S L+ P S + + L GR
Sbjct: 117 LLLDSMVSCFC-------RLGKFEEALSHFNRLLS--LNYVP-SKVSFNAIFRELCAQGR 166
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
EA +F + GI + L+ + + A ELF + P + L
Sbjct: 167 VLEAFNYFVRVNGAGIYLGCWCFNVLMDGLCNQGFMGEALELFDIMQSTNG-YPPTLHLF 225
Query: 335 LVLMY--IEEG-LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L Y + G LVE L ++ M+ L + ++++G+ + R A++ +++
Sbjct: 226 KTLFYGLCKSGWLVEAEL-LIREMEFRSLYPDKTMYTSLIHGYCRDRKMKMAMQALFRMV 284
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
GC P T S+I+ + ++ L K V+ M+ G VV + M+ Y + G++
Sbjct: 285 KIGCKPDTFTLNSLIHGFVKLGLVEKGWLVYKLMEDWGIQPDVVTFHIMIGKYCQEGKVD 344
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
A+ ++ M + P+V Y L R L +V+ L K M + PD V + T++
Sbjct: 345 SALMILNSMVSSNLSPSVHCYTVLSSALYRNGRLEEVDGLLKGMLDNGIIPDHVLFLTLM 404
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
Y + E + + NG D ++
Sbjct: 405 KMYPKGHELQLALNILETIVKNGCGCDPSV 434
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 171/448 (38%), Gaps = 51/448 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE---FRPEKSTLKLLIRYLVQSKKWD 134
PD +S +HG +K ++ Y KL E +P+ T ++I Q K D
Sbjct: 290 PDTFTLNSLIHGFVKLGLVEKGWLVY-----KLMEDWGIQPDVVTFHIMIGKYCQEGKVD 344
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAM 193
S + + N+ P H + L ++ R + + + LL+ + +G I + F + M
Sbjct: 345 SALMILNSMVSSNLSPSVHCYTVLSSALYRNGRLEEVDGLLKGMLDNGIIPDHVLFLTLM 404
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF-LECKSRKL 252
Y K H + + E + G GC ++ A + S + F + K +
Sbjct: 405 KMYPKGHELQLALNILETIVKNG----CGCDPSVILASAEWQTSSNLEQKFEIVLKEISI 460
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
+ + I+ +L ++ AL + +M SL C T L
Sbjct: 461 SDLNLAGVAFSIVISALCETENFCYALDYLHNM------------VSLGCKPLLFTYNSL 508
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
L KE L E + +++ MK+ L + IVN
Sbjct: 509 IRRLCKER-----------------------LFEDAMSLIDHMKDYSLFPNTTTYLIIVN 545
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
+ ++ AA ++ G P Y SII R +AE VF M + G D
Sbjct: 546 EYCRQGNVTAAYHTLRKMRQVGLKPSVAIYDSIIRCLSREKRICEAEVVFKMMLEAGMDP 605
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
Y +M+ Y K GRI +A L +M P+ IY +L+ G KN+ L+
Sbjct: 606 DKKFYLTMIKGYSKNGRILEACELFEQMVENSIPPSSHIYTALIRGLG-MKNMTDKGCLY 664
Query: 493 -KEMERRKVTPDKVSYTTVISAYNRARE 519
+M R P+ V Y+T+++ Y R E
Sbjct: 665 LGKMSRNGFLPNVVLYSTLMNHYLRVGE 692
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 177/411 (43%), Gaps = 17/411 (4%)
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA----NT 173
+T LL R LV SK S + F + PD +V+ R KF+ A N
Sbjct: 82 ATHGLLCRQLVFSKPQLSEFLYNRKFVVGGAEPDVLLLDSMVSCFCRLGKFEEALSHFNR 141
Query: 174 LLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
LL + +++ A + ++ ++ + ++ AGI L C+ +M+
Sbjct: 142 LLSLNYVPSKVSFNAIFRELCAQGRVLEAFN---YFVRVNGAGIYLGCWCFNVLMDGLCN 198
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G + LF +S + P + H++K L L KSG EA R+M+ + + D
Sbjct: 199 QGFMGEALELFDIMQST--NGYPPTLHLFKTLFYGLCKSGWLVEAELLIREMEFRSLYPD 256
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
++Y SLI + ++K+A + + G D L+ +++ GLVEK V +
Sbjct: 257 KTMYTSLIHGYCRDRKMKMAMQALFRMVKIGCKPDTFTLNSLIHGFVKLGLVEKGWLVYK 316
Query: 354 SMKNAKLKISDCISCAIVNG-FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
M++ ++ D ++ I+ G + + +A+ + ++S P Y + +A R
Sbjct: 317 LMEDWGIQ-PDVVTFHIMIGKYCQEGKVDSALMILNSMVSSNLSPSVHCYTVLSSALYRN 375
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM--KAKGCEPNVW 470
+ + + M G V + +++ MY K ++ A+ ++ + GC+P+V
Sbjct: 376 GRLEEVDGLLKGMLDNGIIPDHVLFLTLMKMYPKGHELQLALNILETIVKNGCGCDPSVI 435
Query: 471 IYNSLMDMHGRAKNLRQ-VEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ ++ + NL Q E + KE+ + V+++ VISA F
Sbjct: 436 LASAEWQ---TSSNLEQKFEIVLKEISISDLNLAGVAFSIVISALCETENF 483
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 178/376 (47%), Gaps = 13/376 (3%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+++M+ G + + Y +++ Y K+ K+ F +S L + Y ++ +
Sbjct: 228 FDRMEKKGCLPNVVTYNTLIDGYCKL---RKIDDGFELLRSMALKGLEPNLISYNVVING 284
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR- 327
L + GR E +M ++G D Y +LI + E + L AE MLR
Sbjct: 285 LCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCK--EGNFHQALVMHAE---MLRH 339
Query: 328 --DPEVCLKLVLMY--IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
P V L++ + G + + + ++ M+ L ++ +V+GFS++ A
Sbjct: 340 GLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+V +++I G P VTY ++IN +C A V +M++KG VV+YS++++
Sbjct: 400 YRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSG 459
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+ ++ + +A+ + KM AKG +P+ Y+SL+ + ++ L+ EM R + PD
Sbjct: 460 FCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPD 519
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+ +YT +I+AY + ++ +NE G + D +++ +K ++ E +LL
Sbjct: 520 EFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLL 579
Query: 564 DMKSEGTKLDERLYHS 579
+ E + + YH+
Sbjct: 580 KLFYEESVPSDVTYHT 595
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 199/462 (43%), Gaps = 12/462 (2%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P +++ L ++ + A + + E + + P T +LIR + D
Sbjct: 166 MPGVLSYNAVLDATIRSKRNISFAENVFKEMLQ-SQVSPNVFTYNILIRGFCLAGNLDVA 224
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+ + + LP+ T + L+ + RK LL+ G E L+++N + G
Sbjct: 225 LRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVING 284
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ V +M G LD Y +++ Y K G+ + AL + + + +
Sbjct: 285 LCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQ--ALVMHAEMLRHGLS 342
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P S Y L S+ K+G A +F M+ +G+ + Y +L+ F+ + A
Sbjct: 343 P-SVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 316 LFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVN 372
+ KE + G P V L+ + G + + V+E MK L D +S +++
Sbjct: 402 VLKEMIDNGF--SPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLT-PDVVSYSTVLS 458
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
GF + A++V +++++G P +TY+S+I +C +A +F EM + G
Sbjct: 459 GFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPP 518
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
Y++++ Y G ++ A+ L +M KG P+V Y+ L++ + R+ ++L
Sbjct: 519 DEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLL 578
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
++ + P V+Y T+I + EF V F M G
Sbjct: 579 LKLFYEESVPSDVTYHTLIENCSNI-EFKSVVSLIKGFCMKG 619
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 159/372 (42%), Gaps = 39/372 (10%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y IL +G AL+FF M++KG L + Y +LI + + ++ EL +
Sbjct: 208 YNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMA 267
Query: 322 EKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
KG+ +P + V++ EG +++ V+ M + + ++ G+ K
Sbjct: 268 LKGL--EPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGN 325
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE-------------------- 419
+ A+ ++ +++ G P +TY S+I++ C+ ++A
Sbjct: 326 FHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTT 385
Query: 420 ---------------KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+V EM GF VV Y++++ + G++ DA+ ++ MK KG
Sbjct: 386 LVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKG 445
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
P+V Y++++ R+ ++ + ++ ++M + + PD ++Y+++I + R
Sbjct: 446 LTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++E G D ++ + +++ ++L +M +G D Y +N L
Sbjct: 506 DLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 585 RDAGLQMQAQWL 596
+A+ L
Sbjct: 566 NKQARTREAKRL 577
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%)
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+R A V+++++ P TY +I +C A + F M++KG VV
Sbjct: 183 KRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVT 242
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++++ Y K +I D L+ M KG EPN+ YN +++ R ++++ + EM
Sbjct: 243 YNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMN 302
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+R + D+V+Y T+I Y + F + + E +G ++ K +
Sbjct: 303 KRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMN 362
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ L M+ G +ER Y + ++ G +A
Sbjct: 363 RATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/413 (20%), Positives = 168/413 (40%), Gaps = 35/413 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T LI + ++ + + ++ + P+ T + LV + A +
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY-- 231
L+ I +G +++ +N+ + G+ I V E MK G+ D Y ++ +
Sbjct: 403 LKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCR 462
Query: 232 -YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y + ++ +V + K K D+ +S+ L + R EA F +M G+
Sbjct: 463 SYDVDEALRVKRKMV-AKGIKPDTITYSS-----LIQGFCEQRRTKEACDLFDEMLRVGL 516
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGML-----------------RDPEVCL 333
D Y +LI ++ +++ A +L E EKG+L R E
Sbjct: 517 PPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKR 576
Query: 334 KLVLMYIEEGLVEKTL--DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L+ ++ EE + ++E+ N + K +++ GF + A +V+E ++
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSV----VSLIKGFCMKGMMTEADQVFESML 632
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+ P Y +I+ +CR KA ++ EM + GF V ++V K G++
Sbjct: 633 EKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVN 692
Query: 452 DAMWLVAKMKAKGCE-PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+ ++A + + CE L++++ R N+ V + EM + P+
Sbjct: 693 ELNSVIANV-LRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 6/212 (2%)
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR-IRDA 453
C + ++ +Y R+ L KA + Q GF V++Y++++ ++ R I A
Sbjct: 130 CNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ +M PNV+ YN L+ A NL + + ME++ P+ V+Y T+I
Sbjct: 190 ENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDG 249
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
Y + R+ D + + G + +++ + +++E+ +L +M G LD
Sbjct: 250 YCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLD 309
Query: 574 ERLYHSAMNALRDAG-----LQMQAQWLQQNF 600
E Y++ + G L M A+ L+
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 418 AEKVFIEMQQKGFDKC---VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
A VF +Q+ +D C + +V Y + I A+ +V +A G P V YN+
Sbjct: 116 ASLVFRSLQET-YDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNA 174
Query: 475 LMDMHGRAK-NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
++D R+K N+ E ++KEM + +V+P+ +Y +I + A D+ ++F++
Sbjct: 175 VLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKK 234
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G + + ++ + KL +I++ +LL+ M +G + + Y+ +N L
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGL 285
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 165/348 (47%), Gaps = 2/348 (0%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA--SITEVKLAEE 315
+ ++ + +SGR +A + M+++ I D + +LI + A +A E
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALE 279
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L E + G+ D L+ + ++ + V E M ++ + A+V+
Sbjct: 280 LLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHG 339
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ A ++++L+ +G P VTY S++ A+ + + E+V E+ + GF K +
Sbjct: 340 RCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGI 399
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y++M+ MYGK GR+ A+ L +M+A GC P+ Y L+D G+ + + K+ +EM
Sbjct: 400 TYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEM 459
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ P V+++ +I AY ++ D + ++ +G DR +M+ VF++ +
Sbjct: 460 ADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDET 519
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
+L+ L + M +G K D+ LY + AL + + + Q+ E
Sbjct: 520 RKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAV 567
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 148/324 (45%), Gaps = 6/324 (1%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY---ASLICSFASITEVKLAEELFKEA 320
++ ++ K+G FE +K + MK G L + +Y SL+C +V+L + E
Sbjct: 857 LMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVEL---MVAEM 913
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
E G D V L+LMY G ++T++V S+ A L+ + ++ +S+
Sbjct: 914 EGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRP 973
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
+ ++ +G P +Y ++ A + L+ +A+ +F EM+ KG+ Y M
Sbjct: 974 EEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMM 1033
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ +Y A L++ MK G EP + + LM +G + + + EK+ ++ +
Sbjct: 1034 MKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNL 1093
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
+ Y+TV+ AY R R++ + + E + +G D + + S Q ++ +
Sbjct: 1094 EISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAIL 1153
Query: 561 LLQDMKSEGTKLDERLYHSAMNAL 584
LL+ ++ G L RL ++L
Sbjct: 1154 LLKSLQDCGFDLPIRLLTERTSSL 1177
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 150/321 (46%), Gaps = 7/321 (2%)
Query: 277 EALKFFRDMK-EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
+A F + +K E G+ D I+ +LI ++A + A +F +KG L E +
Sbjct: 766 QAENFVKGLKQESGV--DRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGM 823
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ I +G +++ VV+ +++ +KIS ++ F+K + +K+Y + + G
Sbjct: 824 MRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGY 883
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
+P Y +I+ C + E + EM+ GF +V ++++ MY TG +
Sbjct: 884 LPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIE 943
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE--KLWKEMERRKVTPDKVSYTTVISA 513
+ + G EP+ YN+L+ M+ R N R E L EM +R +TP SY +++A
Sbjct: 944 VYHSILEAGLEPDEDTYNTLIVMYSR--NFRPEEGFTLLYEMGKRGLTPKLESYKILLAA 1001
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+A+ ++ + E R G ++R+I +M+ ++ + LL MK +G +
Sbjct: 1002 SGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPT 1061
Query: 574 ERLYHSAMNALRDAGLQMQAQ 594
H M + +G +A+
Sbjct: 1062 IATMHILMTSYGTSGHPDEAE 1082
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 149/358 (41%), Gaps = 10/358 (2%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P + + + ++ D + EL Y E + L + + KST+ L++ ++ +
Sbjct: 814 LPTVESVNGMMRALIVDGRLDEL-YVVVQELQDL-DIKISKSTVLLMLEAFAKAGDVFEV 871
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+ + K LP+ H +++ ++F+ ++ G + L+ N+ +
Sbjct: 872 MKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLM 931
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
Y + TI VY + AG+ D Y ++ Y + E+ L E R L T
Sbjct: 932 YTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGL--T 989
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P YKIL + GK+ +A F +M+ KG + SIY ++ + + AE
Sbjct: 990 P-KLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEH 1048
Query: 316 LFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L +E G+ +P + +LM Y G ++ V+ S+K++ L+IS +++
Sbjct: 1049 LLSAMKEDGI--EPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDA 1106
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ + R Y + ++ G P + S I A A + +Q GFD
Sbjct: 1107 YLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFD 1164
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 102/496 (20%), Positives = 210/496 (42%), Gaps = 27/496 (5%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFK-IYNVLPDAHTCSRLVASCVRARKFKIA 171
++P+ ++L+ L + + D I + +D + ++ + P + + A C+ +
Sbjct: 534 YKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAECISQGASLLK 593
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMK---SAGIVLDSGCYCQIM 228
LQ + DG+ L S + Y K+ + + + E ++ L S C ++
Sbjct: 594 RACLQGYEPDGKSLL----SILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISECSIMLL 649
Query: 229 EAYYKIGDSEKVAALFLECKSRK--LDSTPFSTH--MYKILCDSLGKSGRAFEALKFFRD 284
KI D+ ++ SRK L F +Y+ L L ++ EA + F D
Sbjct: 650 CKNGKIVDA-------IQEYSRKQMLKRGSFGQDCDLYEYLITYLEEAELFPEACQVFCD 702
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC-LKLVLMYIEEG 343
M+ GI+ ++ S I + + A +L +A + + C + ++ Y +
Sbjct: 703 MQFLGIVPSQKVFPSFIFQCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKLK 762
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
L ++ + V+ +K + I A+++ +++ Y A +++ +I +G +P T
Sbjct: 763 LWQQAENFVKGLKQES-GVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLP---TVE 818
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM---YGKTGRIRDAMWLVAKM 460
S+ + + + +++++ +Q+ ++ S+++ M + K G + + M + M
Sbjct: 819 SVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGM 878
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
KA G PN+ +Y ++ + K R VE + EME PD V T++ Y F
Sbjct: 879 KAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNF 938
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
D ++ Y+ G D ++ ++S+ + EE LL +M G Y
Sbjct: 939 DRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKIL 998
Query: 581 MNALRDAGLQMQAQWL 596
+ A A L QA L
Sbjct: 999 LAASGKAKLWEQADLL 1014
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 6/257 (2%)
Query: 74 QTAVPDAKKFDSFLHGMLKDP-QTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
Q PD F++ ++ K +A + +E ++ RP+ T LI Q
Sbjct: 250 QDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQ-AGLRPDAITYNTLISACSQGSN 308
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNS 191
D V++ E+ PD T + +V+ R K + A + + + G + + +NS
Sbjct: 309 LDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNS 368
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ + K V E++ AG D Y ++ Y K+G + L+ E R
Sbjct: 369 LLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEM--RA 426
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
+ TP + Y +L DSLGK R EA K +M + G+ +++LIC++A
Sbjct: 427 IGCTPDAV-TYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQD 485
Query: 312 LAEELFKEAEEKGMLRD 328
AE F E G+ D
Sbjct: 486 DAERTFDRMVESGVKPD 502
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/478 (21%), Positives = 192/478 (40%), Gaps = 41/478 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +LI+ D L +LP + + ++ +R +++K A L
Sbjct: 324 PTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGL 383
Query: 175 LQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
L++ + G + + + K + + +++KMK AG+ Y ++ Y +
Sbjct: 384 LKLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEK 443
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFE-ALKFFRDMKEKGILED 293
G ++ L+ E + P + Y L K +AF+ A +M++ G+
Sbjct: 444 GRMDEALKLYSEMPDKGF---PPNEVTYTTLMKGYIKK-KAFDNAYALLNEMRQNGVSCG 499
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y LI + V +E+ K ++ EG V T+
Sbjct: 500 DYTYNILINGLYMVNRVCEVDEMLKR-------------------FLSEGFVPTTM---- 536
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+I+NGF K +A +Y Q+ +G P VTY S I+ YCR
Sbjct: 537 ------------TYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTN 584
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
A K+ I +++ G + AY++ + + K G + A+ + + G P+V +YN
Sbjct: 585 CCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYN 644
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
S + + K + + K + M +++V D YTT+I +++ ++ Y+E N
Sbjct: 645 SFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMAN 704
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA-LRDAGLQ 590
+ D + + I+ +LL DM+ + Y+ +NA +RD LQ
Sbjct: 705 HVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQ 762
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 168/421 (39%), Gaps = 40/421 (9%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
Y +M + G+V D+ ++ + LF E + + + MY ++ +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYA---DAKMYDVVIRA 194
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM--- 325
+ G +A++ F +M G+ D +YA I + + A ++ + E G
Sbjct: 195 CVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPW 254
Query: 326 ----------------------LRDP---------EVCLKLVLM--YIEEGLVEKTLDVV 352
L+D +V L +LM Y G V K LD+
Sbjct: 255 ELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLF 314
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ + + + ++ ++ G K+ Q+I QG +P + +I R
Sbjct: 315 DEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRD 374
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+ A + + G V Y ++ K ++ +A+ L KMK G +P++ Y
Sbjct: 375 KRWKDAIGLLKLVVDTGVPD-VFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTY 433
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+SL+ + + + KL+ EM + P++V+YTT++ Y + + FD NE R
Sbjct: 434 HSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQ 493
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
NG I++ ++++ E+ ++L+ SEG Y+S +N AG+
Sbjct: 494 NGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGS 553
Query: 593 A 593
A
Sbjct: 554 A 554
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 162/370 (43%), Gaps = 10/370 (2%)
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
+M Y G+ K LF E S + T + Y +L G E K R M
Sbjct: 297 LMHGYCLNGEVGKALDLFDEVVSDGVTPTNVT---YGVLIKGCDAEGMTDETYKLCRQMI 353
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGL 344
E+G+L + +I K A L K + G+ P+V L++ +
Sbjct: 354 EQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV---PDVFTYGCLIHWLCKHQK 410
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+ + +++ + MK A +K S +++ G+ ++ A+K+Y ++ +G P +VTY +
Sbjct: 411 LHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTT 470
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
++ Y + + A + EM+Q G Y+ ++ R+ + ++ + ++G
Sbjct: 471 LMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEG 530
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
P YNS+++ +A + ++++M ++ +TP+ V+YT+ I Y R D+ V
Sbjct: 531 FVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAV 590
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
K R +G D A + F K + + L + +G D +Y+S +
Sbjct: 591 KLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGY 650
Query: 585 RDAGLQMQAQ 594
++ L+M A+
Sbjct: 651 KN--LKMMAE 658
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/432 (18%), Positives = 177/432 (40%), Gaps = 5/432 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P L+I+ L++ K+W + L + + +PD T L+ + +K A L
Sbjct: 359 PSTYEFNLVIKGLLRDKRWKDAIGLLK-LVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNL 417
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G + +++ ++S + GY + + +Y +M G + Y +M+ Y K
Sbjct: 418 WDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIK 477
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ AL E + + ++ Y IL + L R E + + +G +
Sbjct: 478 KKAFDNAYALLNEMRQNGVSCGDYT---YNILINGLYMVNRVCEVDEMLKRFLSEGFVPT 534
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y S+I F + A ++++ +KG+ + + Y + + ++
Sbjct: 535 TMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLI 594
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
++ ++ A ++ F K+ A+ L+ G P Y S + Y +
Sbjct: 595 YVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLK 654
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ ++A K + M ++ Y++++ + K G + A+ L ++M A P+ +
Sbjct: 655 MMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFT 714
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+L R+ ++ ++L +M R V+P+ V+Y +I+A R + + ++E +
Sbjct: 715 ALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSS 774
Query: 534 GGVIDRAIAGIM 545
G V D I+
Sbjct: 775 GVVPDDTTYDIL 786
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/401 (18%), Positives = 165/401 (41%), Gaps = 45/401 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE--FRPEKSTLKLLIRYLVQSKKWDS 135
P + S L G + + E A Y+E +P+ F P + T L++ ++ K +D+
Sbjct: 428 PSIVTYHSLLLGYCEKGRMDE-ALKLYSE---MPDKGFPPNEVTYTTLMKGYIKKKAFDN 483
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMG 194
+L + + V +T + L+ + + +L+ F+++G + + +NS +
Sbjct: 484 AYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIIN 543
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
G+ K M S +Y +M+ GI + Y ++ Y + + L + + D
Sbjct: 544 GFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRR---DG 600
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
Y D+ K G AL F + + G+ D ++Y S + + ++ + A
Sbjct: 601 IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEAS 660
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
+ + ++ ++ D E I +++GF
Sbjct: 661 KFYYSMIKQRVVADTE-----------------------------------IYTTLIDGF 685
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
SK A+++Y ++++ IP T+ ++ + CR A+++ +M++ +
Sbjct: 686 SKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNI 745
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
V Y+ ++ + G++++A L +M + G P+ Y+ L
Sbjct: 746 VTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/453 (20%), Positives = 177/453 (39%), Gaps = 23/453 (5%)
Query: 64 TIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR-----PEKS 118
T +L R Q +P +F+ + G+L+D + + +A L + P+
Sbjct: 345 TYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKR--------WKDAIGLLKLVVDTGVPDVF 396
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTC-SRLVASCVRAR---KFKIANTL 174
T LI +L + +K V+L + K V P T S L+ C + R K+ + +
Sbjct: 397 TYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEM 456
Query: 175 LQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
E+ + + M GY K + + + +M+ G+ Y ++ Y +
Sbjct: 457 PDKGFPPNEVT---YTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMV 513
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
+V + S T T Y + + K+G A +R M++KGI +
Sbjct: 514 NRVCEVDEMLKRFLSEGFVPT---TMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNI 570
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
Y S I + LA +L G+ D + + ++G + + L +
Sbjct: 571 VTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVL 630
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
+ L + + V G+ + A K Y +I Q + Y ++I+ + ++
Sbjct: 631 LLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGN 690
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+ A +++ EM ++++ ++G I A L+ M+ PN+ YN
Sbjct: 691 VAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNM 750
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
L++ R L++ +L EM V PD +Y
Sbjct: 751 LINACVRDGKLQEAFQLHDEMLSSGVVPDDTTY 783
>gi|255661136|gb|ACU25737.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 426
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 161/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDIVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS +++ + D + + R +G ID+ + M+ + K +
Sbjct: 250 IEPNSITYSTIISIWSKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYEKAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILVGAGRIEEATWV 342
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDIVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 163/353 (46%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++A+N+ + + K ++ + +M++AG+ ++ Y ++ Y + + ++F
Sbjct: 79 IVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ +SK A ++++L S G QV Y ++I AY + L + A+++
Sbjct: 254 SITYSTIISIWSKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYEKAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ +A +V GRI +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPDNIPRDIAIHILVG----AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD +++AY + EFD Y E + G V
Sbjct: 370 KYGNVVEVFDKMCGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 141/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + K G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWSKVGKLDRAAMLFQKLRSSGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYEKAGLVAHAKRLLHE------LKRPDNIPRDIAIHILVGAGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A I+NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMCGLGYFPDSNVIALILNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANDVYMEMQEVG 420
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + ++K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWSKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY K G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYEKAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILVGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMCGLGYFPDSNVIALILNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|255661216|gb|ACU25777.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 426
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 166/338 (49%), Gaps = 6/338 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G +AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRR 378
+ G+ D ++ ++ + L ++ ++ M+ A + + D +S I+ + +
Sbjct: 70 LKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGV-MPDTVSYSTILTMYVENH 128
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ A+ V+ ++ C+ T +I+ Y ++ + +A+++F M++ G + VV+Y+
Sbjct: 129 KFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYN 188
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ +YG +A+ L M+ K E NV YN++M ++G+ + L +EM+ R
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 249 GIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHA 308
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D +A++ L AG +A W+
Sbjct: 309 KRLLHELK----RPDNIPRDTAIHILAGAGRIEEATWV 342
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 152/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K GI D Y S+I F K
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-V 371
A L E G++ D ++ MY+E + L V M+ + D +C I +
Sbjct: 98 ARSLISEMRVAGVMPDTVSYSTILTMYVENHKFLEALSVFREMREINC-LLDLTTCNIMI 156
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ + + A +++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y++M+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNAITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN------------------ 533
++++ V D+V Y T+I AY RA + +E +
Sbjct: 277 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRI 336
Query: 534 -------------GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
G V D + M+ +FSK + + ++ + M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIDLFSKYRKYTNVGEVFEKMRGLGYFPDSNVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 191/428 (44%), Gaps = 18/428 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS----CVRARKFKI 170
P++ T LI + + +D +S + + V D S L+ C ++ I
Sbjct: 7 PDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 171 ANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ L + IT L+A+NS + + K ++ + +M+ AG++ D+ Y I+
Sbjct: 67 FSRLKRSGITPD---LVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTILTM 123
Query: 231 YYKIGDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
Y + + ++F E + LD T + I+ D G+ A EA + F M++
Sbjct: 124 YVENHKFLEALSVFREMREINCLLDLTTCN-----IMIDVYGQLDMAKEADRLFWSMRKM 178
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI + Y +L+ + A LF+ + K + ++ ++++Y + EK
Sbjct: 179 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKA 238
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
++++ M+N ++ + I++ + K A ++++L S G QV Y ++I A
Sbjct: 239 NNLIQEMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVA 298
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
Y R L + A+++ E+++ + + + + GRI +A W+ + G +
Sbjct: 299 YERAGLVAHAKRLLHELKRPD----NIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKD 354
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ ++ ++D+ + + V +++++M PD V++AY + EFD + Y
Sbjct: 355 ITVFERMIDLFSKYRKYTNVGEVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKANEVYM 414
Query: 529 EFRMNGGV 536
E + G V
Sbjct: 415 EMQDEGCV 422
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YNS++++ G+AK ++ L EM V PD VSY+T+++ Y
Sbjct: 67 FSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTILTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+F + + E R ++D IM+ V+ +L +E +L M+ G + +
Sbjct: 127 NHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 190/473 (40%), Gaps = 49/473 (10%)
Query: 95 QTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHT 154
ELA ++ ++ T L+R L + +S ++ + I PDA
Sbjct: 115 NNPELALKFFQLSRVNLNLCHSFRTYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASV 174
Query: 155 CSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVY-EKM 212
LV+S A KF IA T + DG E +L+ +N + + + + + E+M
Sbjct: 175 LGFLVSSATDAGKFNIARTWV-----DGVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQM 229
Query: 213 KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKS 272
G PF + + IL L +
Sbjct: 230 GLHG---------------------------------------PFDSCSFNILIRGLCRI 250
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
G+ +A + F +M+ G D Y +LI F + EV +L KE K L P+V
Sbjct: 251 GKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDL-SPDVV 309
Query: 333 L--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
++ Y + G +EK + +M ++ +K + ++NGF K +A +YE++
Sbjct: 310 TYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEM 369
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+ GC P +T+ S+I+ +CR ++ K++ E+ + ++ + K R+
Sbjct: 370 LLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRL 429
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
+A + +K + ++YN ++D +A N+ + + EME ++ PDK++YT +
Sbjct: 430 HEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTIL 489
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
I + + +N G D ++ K E +++Q
Sbjct: 490 IIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQ 542
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 100/207 (48%), Gaps = 1/207 (0%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG-FDKCVVAYSSMV 441
A +++ ++ GC P +TY ++IN +CR+ + + E+ K VV Y+S++
Sbjct: 256 AFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSII 315
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ Y K G++ A L M + G +PN + +N L++ G+ ++ E +++EM
Sbjct: 316 SGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCP 375
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD +++T++I + R + + +K ++E + I+ K +++ E
Sbjct: 376 PDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGF 435
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAG 588
L+D+K +Y+ ++ AG
Sbjct: 436 LRDLKWRHIVAQPFMYNPVIDGFCKAG 462
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 136/328 (41%), Gaps = 38/328 (11%)
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD-MKEKGILEDPSIYASLICSFASITEV 310
+D FS +Y L + L + + EA+ FFR+ M G + S + LI I +V
Sbjct: 195 VDGVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCS-FNILIRGLCRIGKV 253
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A ELF E G C V+ Y +
Sbjct: 254 DKAFELFNEMRGFG-------CSPDVITYN----------------------------TL 278
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCI-PGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
+NGF + + ++L+S+ + P VTY SII+ YC++ KA +F M G
Sbjct: 279 INGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSG 338
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
++ ++ +GK G + A + +M GC P++ + SL+D H R + +
Sbjct: 339 IKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSL 398
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
KLW E+ R ++P++ ++ + +A + F + + V + ++ F
Sbjct: 399 KLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGF 458
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLY 577
K ++E +L +M+ + K D+ Y
Sbjct: 459 CKAGNVDEANVILAEMEEKRCKPDKITY 486
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/410 (20%), Positives = 162/410 (39%), Gaps = 51/410 (12%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVS 138
D+ F+ + G+ + + + A++ +NE + P+ T LI + + D
Sbjct: 236 DSCSFNILIRGLCRIGKVDK-AFELFNEMRGF-GCSPDVITYNTLINGFCRVNEVDRGHD 293
Query: 139 LSEDFKIYNVL-PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L ++ N L PD T + +++ + K + A+ L I+ G + FN + G+
Sbjct: 294 LLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGF 353
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K+ S +YE+M G D + +++ + + G E+ L+ E +R L
Sbjct: 354 GKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNE 413
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
++ + IL ++L K R EA F RD+K + I+ P +Y +I F V A +
Sbjct: 414 YT---FAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVI 470
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E EEK D L++ + +G + +
Sbjct: 471 LAEMEEKRCKPDKITYTILIIGHCMKGRLSE----------------------------- 501
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF------IEMQQKGF 430
A+ ++ +++ GC P +T S+I+ + + ++A ++ + K
Sbjct: 502 ------AISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASEDFNLGLKSL 555
Query: 431 DKCVVAYSSM---VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
+ V ++ VA + + +A M C +YN L+D
Sbjct: 556 KRNVPLRTNTDIPVAFMSTVDGLTNHFPGLASMPLATCNEGQSLYNILLD 605
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/468 (19%), Positives = 192/468 (41%), Gaps = 39/468 (8%)
Query: 150 PDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMY------ 202
PD + C++L+ + C R R A L + + + A+N+ + GY +
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 166
Query: 203 ------------YSTIL--------VYEKMKSAGIVLDSGC------YCQIMEAYYKIGD 236
Y+ I+ V E + +L GC Y ++EA K
Sbjct: 167 IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG 226
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+ + E +++ TP + Y ++ + + + GR +A +F + G D
Sbjct: 227 FGQAMEVLDEMRAKG--CTP-NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 283
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y +++ + + EELF E EK + + LV + G+VE+ + V+E M
Sbjct: 284 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 343
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ + ++N K+ A + + S GC P ++Y +++ CR +
Sbjct: 344 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 403
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
A+++ EM +K V +++ + + + G I A L+ +M GCE N+ YN+L+
Sbjct: 404 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 463
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+ + +L+ M P+ ++YTT+++ A D + E
Sbjct: 464 NGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCA 520
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ ++V F + ++E ++L++ M G + Y++ ++ +
Sbjct: 521 PNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI 568
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 148/327 (45%), Gaps = 3/327 (0%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+T + I+ +++ K GR +A +F +M G D Y +++ + A+EL
Sbjct: 350 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 409
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
KE K + + + ++GL+E+ ++E M +++ A+VNGF +
Sbjct: 410 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 469
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
+A++++ S C P +TY +++ C A ++ EM QK VV +
Sbjct: 470 GRVDSALELF---YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTF 526
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+ +V+ + + G + +A+ LV +M GC PN+ YN+L+D + N + +L +
Sbjct: 527 NVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVS 586
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
V+PD V+Y+++I +R + +K ++ + G I ++ K +
Sbjct: 587 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDG 646
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ M S G +E Y + + L
Sbjct: 647 AIDFFAYMVSNGCMPNELTYITLIEGL 673
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 129/295 (43%), Gaps = 5/295 (1%)
Query: 292 EDPSIY--ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
E P +Y LI + A + + AE G D LV Y G ++
Sbjct: 105 EAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAAR 164
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
++ SM A + I+ G R A+ + + ++ +GC P VTY ++ A
Sbjct: 165 RLIASMPVAPDAYT---YTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 221
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ + +A +V EM+ KG +V Y+ ++ + GR+ DA + ++ + G +P+
Sbjct: 222 CKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT 281
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
Y +++ AK VE+L+ EM + P++V++ ++ + R + ++ +
Sbjct: 282 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 341
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+G + + I++ K ++++ + L +M S G D Y + + L
Sbjct: 342 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 396
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 161/398 (40%), Gaps = 16/398 (4%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFS--THMYKIL 265
V + +G +D Y ++ Y + G L+ R + S P + + Y +
Sbjct: 131 VLRAAERSGTAVDVFAYNTLVAGYCRYGQ--------LDAARRLIASMPVAPDAYTYTPI 182
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
L GR EAL DM +G Y L+ + T A E+ E KG
Sbjct: 183 IRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 242
Query: 326 LRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
P + V++ EG V+ + + + + + ++ G + +
Sbjct: 243 --TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDV 300
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+++ +++ + C+P +VT+ ++ +CR + +A +V +M G + ++
Sbjct: 301 EELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINT 360
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K GR+ DA + M + GC P+ Y +++ RA+ ++L KEM R+ P+
Sbjct: 361 ICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 420
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+V++ T I + + + +G ++ +V F +++ ++L
Sbjct: 421 EVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFY 480
Query: 564 DMKSEGTKLD-ERLYHSAMNALR-DAGLQMQAQWLQQN 599
M + + L NA R DA ++ A+ LQ++
Sbjct: 481 SMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 518
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 112/276 (40%), Gaps = 3/276 (1%)
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L A +G D +C KL+ G V+ + + + + +V
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G+ + AA ++ + S P TY II C +A + +M +G
Sbjct: 153 GYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
VV Y+ ++ K+ AM ++ +M+AKGC PN+ YN +++ R + +
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+ PD VSYTTV+ A+ ++ + + E + + ++V F +
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 329
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+E +++L+ M G + L + +N + G
Sbjct: 330 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQG 365
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/479 (20%), Positives = 181/479 (37%), Gaps = 39/479 (8%)
Query: 56 VNASTNF-PTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR 114
V ST F +E+ + + P+ ++ ++GM ++ + + A ++ N F+
Sbjct: 221 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD-AREFLNRLSSY-GFQ 278
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ + +++ L +K+W+ + L + N +P+ T LV R + A +
Sbjct: 279 PDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 338
Query: 175 LQVFITDGEIALLAF-NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ G A N + K M S G D+ Y +++ +
Sbjct: 339 LEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 398
Query: 234 IGDSEKVAALFLE-----CKSRKLDSTPF--------------------STH-------M 261
E L E C ++ F S H
Sbjct: 399 AERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVT 458
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L + GR AL+ F M K + Y +L+ + + A EL E
Sbjct: 459 YNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEML 515
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+K + LV + ++GL+++ +++VE M + +++G +K
Sbjct: 516 QKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSE 575
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+++ L+S G P VTY+SII R +A K+F +Q G V Y+ ++
Sbjct: 576 EALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKIL 635
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
K A+ A M + GC PN Y +L++ L++ L +E+ R V
Sbjct: 636 LALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 132/253 (52%), Gaps = 14/253 (5%)
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
G +K DVVE MK S I++G+ K + A + ++++++ P ++T+
Sbjct: 243 GKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITF 302
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+I+ +CR + A+KVF EMQ++G VV Y+S++ G++ +A+ L KM
Sbjct: 303 NILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSG 362
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
G +PNV YN+L++ + K L++ ++ ++ +R + P+ +++ T+I AY +A D
Sbjct: 363 MGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD- 421
Query: 523 CVKFYNEFRMNGGVIDRAIAG-------IMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
+ F + ++D + ++VG F + ++E KL ++M+ G K D
Sbjct: 422 -----DAFLLRSMMLDTGVCPNVSTYNCLIVG-FCREGNVKEARKLAKEMEGNGLKADLV 475
Query: 576 LYHSAMNALRDAG 588
Y+ ++AL G
Sbjct: 476 TYNILVDALCKKG 488
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 149/328 (45%), Gaps = 7/328 (2%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ ++ + L K G+ +A DMK G Y ++I + ++ A+ L KE
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
K + + L+ + + V V E M+ L+ + +++NG
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+ + +++ G P VTY ++IN +C+ + +A ++ ++ ++G V+ +++++
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
YGK GR+ DA L + M G PNV YN L+ R N+++ KL KEME +
Sbjct: 412 DAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLK 471
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRM---NGGVIDRAIAGIMVGVFSKLSQIEEL 558
D V+Y ++ A + E V+ +E + G + +++ F ++EE
Sbjct: 472 ADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEA 531
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRD 586
+LL +M +G + Y + LRD
Sbjct: 532 NRLLNEMLEKGLIPNRTTY----DILRD 555
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 127/255 (49%), Gaps = 2/255 (0%)
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK-VYEQLISQ 393
LV Y++ G ++ L+ + + ++S +SC + + G V+ VY+++I +
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLS-ALSCNPMLVSLVKEGRIGVVESVYKEMIRR 223
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
VT+ +IN C++ + KA V +M+ GF V+ Y++++ Y K G++ A
Sbjct: 224 RIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKA 283
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
L+ +M AK PN +N L+D R +N+ +K+++EM+R+ + P+ V+Y ++I+
Sbjct: 284 DALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLING 343
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ D + ++ G + ++ F K ++E ++L D+ G +
Sbjct: 344 LCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPN 403
Query: 574 ERLYHSAMNALRDAG 588
+++ ++A AG
Sbjct: 404 VITFNTLIDAYGKAG 418
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 103/253 (40%), Gaps = 9/253 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ F+ + G +D A + E ++ +P T LI L + K D +
Sbjct: 297 PNEITFNILIDGFCRDENVTA-AKKVFEEMQR-QGLQPNVVTYNSLINGLCSNGKLDEAL 354
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L + + P+ T + L+ + + K A +L G ++ FN+ + Y
Sbjct: 355 GLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K L+ M G+ + Y ++ + + G+ ++ L E + L +
Sbjct: 415 GKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADL 474
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRD---MKEKGILEDPSIYASLICSFASITEVKLA 313
+ Y IL D+L K G +A++ + M++KG + Y LI F + +++ A
Sbjct: 475 VT---YNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEA 531
Query: 314 EELFKEAEEKGML 326
L E EKG++
Sbjct: 532 NRLLNEMLEKGLI 544
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 183/409 (44%), Gaps = 8/409 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + ++ ++S +W F+ + P+ T + L+ + R+F+ L
Sbjct: 112 PGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L +G +L++ + + K + ++++M G+ D CY +++ + +
Sbjct: 172 LTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLR 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPF-STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
GD K ++ K +S+ + S Y I+ + L K G+ E+++ + MK+
Sbjct: 232 KGDFVKANEIW---KRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSP 288
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
D ++S+I + AE++F+E E G+ D ++ G + K ++
Sbjct: 289 DLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELW 348
Query: 353 ESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
M +K + +S ++ G + A+ ++ L +G TY +IN C+
Sbjct: 349 NVM--SKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCK 406
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+KA ++ E + +G D AYSSMV K G + A+ L+ +MK + N +
Sbjct: 407 NGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHV 466
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+NSL++ + RA L + + +EM+ + P VSY T+I+ +A F
Sbjct: 467 FNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERF 515
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/511 (18%), Positives = 212/511 (41%), Gaps = 41/511 (8%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
P+ + LI L +S V L ++ + V PD + L+ +R F AN
Sbjct: 180 LNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKAN 239
Query: 173 TLLQVFITDGEI-------------------------------------ALLAFNSAMGG 195
+ + +T+ + L F+S + G
Sbjct: 240 EIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHG 299
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+K + + V+++M +G+ D Y ++ ++ G K L+ S+
Sbjct: 300 LSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELW-NVMSKNNCCN 358
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
S Y +L L + + +A+ +++ + E+G+ D + Y LI + A
Sbjct: 359 IVS---YNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALR 415
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ +EAE +G D +V ++G++E+ ++++ MK + K++ + +++NG+
Sbjct: 416 ILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYV 475
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ A+ V ++ S+ C P V+Y +IIN C+ +S A EM ++G ++
Sbjct: 476 RAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMI 535
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
YS ++ + ++ A+ L + K +P++ ++N ++ A+ + +++ +M
Sbjct: 536 TYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQM 595
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ PD V++ T++ +A + +K ++ G D I +++
Sbjct: 596 RQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARV 655
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ ++ L D G + ++ + A+ D
Sbjct: 656 SDAIEFLYDALDRGILPNAPTWNVLVRAVVD 686
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 117/270 (43%), Gaps = 2/270 (0%)
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
+ G P V ++ ++ LV +V+ M+ + S+ ++ + + ++K
Sbjct: 35 QHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMP 94
Query: 381 WAAVKVYEQLISQ-GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A+ +++ ++ GC PG ++ S++NA+ + +AE F Q G + Y+
Sbjct: 95 DQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNI 154
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ + K + L+ M G P++ Y +L++ ++ NL +L+ EM R
Sbjct: 155 LIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRG 214
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA-IAGIMVGVFSKLSQIEEL 558
V PD + Y +I + R +F + + V IM+ KL +++E
Sbjct: 215 VNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDES 274
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+++ MK D + S ++ L AG
Sbjct: 275 MEMWNRMKKNEKSPDLFTFSSMIHGLSKAG 304
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/409 (20%), Positives = 163/409 (39%), Gaps = 25/409 (6%)
Query: 78 PDAKKFDSFLHGMLK--DPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
PD F S +HG+ K + E + E+ P+ R + L L R
Sbjct: 288 PDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFR---------- 337
Query: 136 IVSLSEDFKIYNVLPDAHTCS-----RLVASCVRARKFKIANTLLQVFITDGEIA-LLAF 189
L++ F+++NV+ + C+ L+ + +K + A Q+ G A +
Sbjct: 338 TGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTY 397
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
+ G K + + E+ ++ G LD+ Y ++ K G E+ L + K
Sbjct: 398 GLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKK 457
Query: 250 --RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
RKL+S H++ L + ++ + EA+ R+MK K Y ++I
Sbjct: 458 NRRKLNS-----HVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKA 512
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
A KE E+G+ D L+ V+ L++ N +LK +
Sbjct: 513 ERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMH 572
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
I++G + A++++ Q+ C+P VT+ +I+ + +A K++ + +
Sbjct: 573 NIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILE 632
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
G +++Y+ R+ DA+ + +G PN +N L+
Sbjct: 633 AGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLV 681
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 204/494 (41%), Gaps = 43/494 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T L+ V++ + D+ + L ++ Y V PDA + L+ C R +F+ A +
Sbjct: 192 PDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRV 251
Query: 175 LQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+ + D + L +N + G KL M+ V+E+M + D Y ++
Sbjct: 252 WEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLC 311
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+ D + A ++ E L P +Y L +GR EA KF+ M GI
Sbjct: 312 RSTDVDSAARVYSEMIKTGL--VP-DVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGI-R 367
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI-EEGLVEKTLDV 351
+ + Y ++ V A +L++ E+ L V ++ + E+G K+L +
Sbjct: 368 NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQI 427
Query: 352 VESMKNA-----------------------------------KLKISDCISCAIVNGFSK 376
+E + + K + I A++NGF +
Sbjct: 428 LEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQ 487
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A++VY Q+ C P +TY ++I+ C+ Y +A + EM +KG V
Sbjct: 488 ASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNT 547
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM- 495
Y S++ + +I A+ L ++ KG + +V ++N L+ A + + +L EM
Sbjct: 548 YGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMK 607
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
E+ P+ V+Y T++ + FD + NG V D + ++
Sbjct: 608 EKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRT 667
Query: 556 EELVKLLQDMKSEG 569
E V+LL +M + G
Sbjct: 668 PEGVQLLNEMLASG 681
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/491 (20%), Positives = 215/491 (43%), Gaps = 14/491 (2%)
Query: 108 KKLPEF---RPEKSTLKLLIRYLVQSKKWDS----IVSLSEDFKIYNVLPDAHTCSRLVA 160
++LP F P + L+ V+++++ SLS + P+ T + ++
Sbjct: 108 RRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLR 167
Query: 161 S-CVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
S CVR A TL G + +++ M G+ K + + + + ++M S +
Sbjct: 168 SLCVRG-DLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQ 226
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
D+ CY ++ ++ G+ EK ++ E R ++P + Y ++ D L K G EA
Sbjct: 227 PDAVCYNALLGGCFRNGEFEKAMRVW-EQLVRDPGASP-NLATYNVMLDGLCKLGMFKEA 284
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+ M D Y ++I T+V A ++ E + G++ D + L+
Sbjct: 285 GDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKG 344
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI-P 397
+ G V + +SM + ++ + ++ G A ++E L + P
Sbjct: 345 FCHAGRVGEAWKFWDSMSVSGIRNVTSYN-IMLKGLFDGGMVDKATDLWELLEKDDSLSP 403
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
VT++++I+ C +K+ ++ E + G + +YSSM++ K GR+ DA+ L
Sbjct: 404 DMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLY 463
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
K+ +PN IYN+L++ +A +++ +M +P ++Y T+I +A
Sbjct: 464 EKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKA 523
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
++ +F E G ++D G ++ + +I+ + L + +G + D ++
Sbjct: 524 EKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMH 583
Query: 578 HSAMNALRDAG 588
+ ++ L AG
Sbjct: 584 NILIHGLCSAG 594
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 111/246 (45%), Gaps = 7/246 (2%)
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS-QGCIPGQVTYA 403
+ + L ++ +++ + + S+ + +++ FS+ AA+ + +L S GC PG ++
Sbjct: 66 LPRLLGILPRLRH-RPRFSESAALVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHN 124
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVV----AYSSMVAMYGKTGRIRDAMWLVAK 459
++++A+ R +S A+ F + F + + Y+ M+ G + A+ L
Sbjct: 125 ALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDS 184
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
++ +G P+ Y++LM + L L EM +V PD V Y ++ R E
Sbjct: 185 LRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGE 244
Query: 520 FDMCVKFYNEF-RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
F+ ++ + + R G + A +M+ KL +E + + M + + D Y
Sbjct: 245 FEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYG 304
Query: 579 SAMNAL 584
+ ++ L
Sbjct: 305 TMIHGL 310
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/421 (19%), Positives = 170/421 (40%), Gaps = 36/421 (8%)
Query: 71 SHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKK--LPEFRPEKSTLKLLI---R 125
++HQ PD + + +HG+ + A Y K +P+ S LK R
Sbjct: 294 NNHQ---PDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGR 350
Query: 126 YLVQSKKWDSI-VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
K WDS+ VS + YN++ + A L ++ D +
Sbjct: 351 VGEAWKFWDSMSVSGIRNVTSYNIM---------LKGLFDGGMVDKATDLWELLEKDDSL 401
Query: 185 A--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ ++ F++ + G + ++ + E+ +++G LD Y ++ K G +
Sbjct: 402 SPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVK 461
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L+ + +DS ++H+Y L + ++ + +A++ + M E Y +LI
Sbjct: 462 LY---EKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIH 518
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ A +E EKG + D L+ + ++ L + + + L+
Sbjct: 519 GLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQT 578
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYE--QLISQ-----GCIPGQVTYASIINAYCRIALY 415
+ +++G +A KV E QL+S+ C P VTY ++++ + +
Sbjct: 579 DVVMHNILIHGLC------SAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCF 632
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
KA +++ + + G +++Y++ + R + + L+ +M A G P +N L
Sbjct: 633 DKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNIL 692
Query: 476 M 476
+
Sbjct: 693 V 693
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/487 (22%), Positives = 201/487 (41%), Gaps = 35/487 (7%)
Query: 139 LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL-----LAFNSAM 193
L E VLPD T + +++ RA K A+ + + D E+ L + FN +
Sbjct: 241 LVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLML 300
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
G+ K M + E MK G CY + + G+ + + E ++ ++
Sbjct: 301 KGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIE 360
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
++ Y I+ D L ++ +A M G+ D Y++L+ + S +V A
Sbjct: 361 PNAYT---YNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEA 417
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV-N 372
+ + E G + C L+ +EG + ++++ M N K D ++C IV N
Sbjct: 418 KSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKM-NEKCYQPDTVTCNIVVN 476
Query: 373 GFSKRRGYWAAVKVYEQLISQG----------------------CIPGQVTYASIINAYC 410
G + A ++ ++ + G C+P +TY ++IN C
Sbjct: 477 GLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLC 536
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
++ +A+K FIEM K V Y + + + K G+I A ++ M+ GC +
Sbjct: 537 KVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQ 596
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YN+L+ G + ++ L EM+ + ++PD +Y +I+ + + +E
Sbjct: 597 TYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEM 656
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ-DMKSEGTKLDERLYHSAMNALRDAGL 589
G + + I++ FSK S + +L + + G K E LY N L G
Sbjct: 657 LDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRK--EALYSLMFNELLAGGQ 714
Query: 590 QMQAQWL 596
+A+ L
Sbjct: 715 LSEAKEL 721
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 126/304 (41%), Gaps = 41/304 (13%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S +Y +L S + R + DM + + LI S A +LF
Sbjct: 114 SLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLF 173
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
++ +KG + LV GLV++ L++V + + ++ + + +V+ F +
Sbjct: 174 EKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIA-NRVVYNTLVSRFCRE 232
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ---QKGFDKC- 433
A ++ E++ G +P VT+ S I+A CR +A ++F +MQ + G +
Sbjct: 233 EMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPN 292
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMK-------------------------------- 461
VV ++ M+ + K G + DA LV MK
Sbjct: 293 VVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLD 352
Query: 462 ---AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY-NRA 517
AKG EPN + YN +MD R L L M R V PD V+Y+T++ Y +R
Sbjct: 353 EMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRG 412
Query: 518 REFD 521
+ F+
Sbjct: 413 KVFE 416
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 190/428 (44%), Gaps = 38/428 (8%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
EFR + I L+ S +++ + E + NVLPD TCS +V + RK
Sbjct: 256 EFR-DSHVYNAAISGLLSSARYEDAWKVYESMEADNVLPDHVTCSIMV---IVMRKL--- 308
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
G A A+ +EKM G+ +++++
Sbjct: 309 ----------GHSAKDAWQ-----------------FFEKMNGKGVKWGEEVLGALIKSF 341
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
G + + E + + + S +T +Y L D+ KS R EA F +MK KGI
Sbjct: 342 CVEGLMSEALIILSELEKKGVSS---NTIVYNTLMDAYCKSNRVEEAEGLFVEMKTKGIK 398
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY-IEEGLVEKTLD 350
+ + L+ +++ + ++ E+L E +E G+ + + ++ Y ++ + + D
Sbjct: 399 PTEATFNILMYAYSRKMQPEIVEKLMAEMQETGLKPNAKSYTCIISAYGKQKNMSDMAAD 458
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
MK +K + A+++ +S + A +E + +G P TY ++++A+
Sbjct: 459 AFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFR 518
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
R K++ M+++ + V ++++V + K G ++A +++K G P V
Sbjct: 519 RAGDTQTLMKIWKLMRREKVEGTRVTFNTLVDGFAKHGYYKEARDVISKFANVGLHPTVM 578
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YN LM+ + R ++ +L +EM + PD V+Y+T+I A+ R R+F ++ E
Sbjct: 579 TYNMLMNAYARGGRHSKLPELLEEMAAHNLKPDSVTYSTMIYAFLRVRDFSQAFFYHQEM 638
Query: 531 RMNGGVID 538
+G V+D
Sbjct: 639 VKSGQVMD 646
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 149/318 (46%), Gaps = 13/318 (4%)
Query: 279 LKFFRDMKEKGILEDPSIYASLICS--FASITEVKLAEEL---FKEAEEKGMLRDPEVCL 333
L FF+ M+ ++PS+ C+ F + + K+ ++L F RD V
Sbjct: 209 LYFFQWMRS----QEPSLVTPRACTVLFPLLGKAKMGDKLMVLFTNLPSSREFRDSHVYN 264
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA--AVKVYEQLI 391
+ + E V ESM+ + + D ++C+I+ ++ G+ A A + +E++
Sbjct: 265 AAISGLLSSARYEDAWKVYESMEADNV-LPDHVTCSIMVIVMRKLGHSAKDAWQFFEKMN 323
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+G G+ ++I ++C L S+A + E+++KG + Y++++ Y K+ R+
Sbjct: 324 GKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRVE 383
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+A L +MK KG +P +N LM + R VEKL EM+ + P+ SYT +I
Sbjct: 384 EAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKLMAEMQETGLKPNAKSYTCII 443
Query: 512 SAYNRAREF-DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
SAY + + DM + + + +G ++ +S E+ ++M+ EG
Sbjct: 444 SAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQREGI 503
Query: 571 KLDERLYHSAMNALRDAG 588
K Y + ++A R AG
Sbjct: 504 KPSIETYTALLDAFRRAG 521
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 153/364 (42%), Gaps = 19/364 (5%)
Query: 233 KIGDSEKVAALFLECKSRKLDSTPF-STHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K+GD K+ LF S S F +H+Y L S R +A K + M+ +L
Sbjct: 239 KMGD--KLMVLFTNLPS----SREFRDSHVYNAAISGLLSSARYEDAWKVYESMEADNVL 292
Query: 292 EDPSIYASLICSFASITEVKL------AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
D + CS I KL A + F++ KG+ EV L+ + EGL+
Sbjct: 293 PD-----HVTCSIMVIVMRKLGHSAKDAWQFFEKMNGKGVKWGEEVLGALIKSFCVEGLM 347
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
+ L ++ ++ + + + +++ + K A ++ ++ ++G P + T+ +
Sbjct: 348 SEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRVEEAEGLFVEMKTKGIKPTEATFNIL 407
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD-AMWLVAKMKAKG 464
+ AY R EK+ EMQ+ G +Y+ +++ YGK + D A KMK G
Sbjct: 408 MYAYSRKMQPEIVEKLMAEMQETGLKPNAKSYTCIISAYGKQKNMSDMAADAFLKMKKDG 467
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+P Y +L+ + + + ++ M+R + P +YT ++ A+ RA + +
Sbjct: 468 IKPTSHSYTALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLM 527
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
K + R R +V F+K +E ++ + G Y+ MNA
Sbjct: 528 KIWKLMRREKVEGTRVTFNTLVDGFAKHGYYKEARDVISKFANVGLHPTVMTYNMLMNAY 587
Query: 585 RDAG 588
G
Sbjct: 588 ARGG 591
>gi|255661178|gb|ACU25758.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 352
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 161/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSXKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G + D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 97/193 (50%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSXKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM V P+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL 589
Y++ + DA L
Sbjct: 187 YNTLLRVYGDAEL 199
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 157/345 (45%), Gaps = 12/345 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T LI + + +D+ +S + + V D S L+ + + A ++
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSXKLCDYSKAISI 66
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G + L+A+N+ + + K ++ + +M++AG++ ++ Y ++ Y +
Sbjct: 67 FSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVE 126
Query: 234 IGDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ ++F E + K LD T + I+ D G+ G A EA K F M++ GI
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y +L+ + A LF+ + K + ++ ++++Y + EK ++
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++ M+N ++ + I++ + K A ++++L S G QV Y ++I AY R
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYER 301
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
L + A+++ E+++ +A + + GRI +A W+
Sbjct: 302 AGLVAHAKRLLHELKRPDNIPRDIA----IHILAGAGRIEEATWV 342
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 20/289 (6%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ +I ++K + SL + + V+P+ + S L+ V +KF A
Sbjct: 75 FMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEA- 133
Query: 173 TLLQVFITDGEIA----LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
L VF EI L N + Y +L M ++ M+ GI + Y ++
Sbjct: 134 --LSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLL 191
Query: 229 EAYYKIGDSE---KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
Y GD+E + LF + + ++ + Y + GK+ +A ++M
Sbjct: 192 RVY---GDAELFGEAIHLFRLMQRKNIEQNVVT---YNSMMMIYGKTLEHEKANNLIQEM 245
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+ +GI + Y+++I + + ++ A LF++ G+ D + +++ Y GLV
Sbjct: 246 QNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLV 305
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
++ +K I I+ I+ G + A V+ Q I G
Sbjct: 306 AHAKRLLHELKRPD-NIPRDIAIHILAGAGRIE---EATWVFRQAIDAG 350
>gi|255661166|gb|ACU25752.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 426
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 161/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + ++ +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERVGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 150/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G+ + L+ MY+E + L V M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY R + +E
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERVGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSXVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 163/353 (46%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG+ ++ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R+ L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERVGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ +A + + GRI +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + EFD Y E + G V
Sbjct: 370 KYGNVVEVFDKMRGLGYFPDSXVIALVLNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 143/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ + V A+ L E L+ P+ + + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERVGLVAHAKRLLHE------LKRPDNIPRDIAIHILAGAGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A ++NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSXVIALVLNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANDVYMEMQEVG 420
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY ++G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERVGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSXVIALVLNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 190/447 (42%), Gaps = 35/447 (7%)
Query: 170 IANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
+A L++ DG + ++ +N+ + GY K+ + + V E+M + G+ LD Y ++
Sbjct: 172 LAEMLVRGRGIDG-LDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVA 230
Query: 230 AYYKIGDSEKV-------------------AALFLE-CKSRKLDSTPFSTH--------- 260
++ GD++ AL E CK + +D FS +
Sbjct: 231 GFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEA-FSLYEGMVRSGVL 289
Query: 261 ----MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
L D L + G+ EA FR+M + G+ + Y +LI S A + L
Sbjct: 290 PDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGL 349
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
E +G++ D + L+ +EG +E+ DV+ ++ + + +V+ +
Sbjct: 350 LGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCR 409
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A +V Q+ + IP VT++SIIN + KA +M+ G VV
Sbjct: 410 AGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVT 469
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y +++ + K A+ + M +G E N ++ +SL++ + N+ E L+K+M+
Sbjct: 470 YGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMD 529
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
R + D V+YTT++ + K E D + + + L +
Sbjct: 530 ERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFS 589
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNA 583
E L++M++ G + D+ Y++ + A
Sbjct: 590 EAKSFLKEMRNTGLEPDQATYNTMIAA 616
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 182/418 (43%), Gaps = 6/418 (1%)
Query: 181 DG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
DG E ++ + + +G Y K +YE M +G++ D +++ + G +
Sbjct: 251 DGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSE 310
Query: 240 VAALFLECKSRKLDSTPFSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
ALF E K+ P H+ Y L DSL K+ R E+L +M +G++ D +Y
Sbjct: 311 AYALFREMD--KIGVAP--NHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYT 366
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
+L+ +++ A+++ + A+ + + LV + G ++ V+ M+
Sbjct: 367 ALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEK 426
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+ + +I+NG KR A ++ G P VTY ++I+ + + A
Sbjct: 427 SVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAA 486
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
V+ +M +G + S+V K G I A L M +G + Y +LMD
Sbjct: 487 LDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDG 546
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ N+ K+ +E+ + ++PD V Y I+ +F F E R G D
Sbjct: 547 LFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPD 606
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+A M+ + + + +KLL++MK K + Y + + L +AG+ +A++L
Sbjct: 607 QATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFL 664
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/428 (20%), Positives = 186/428 (43%), Gaps = 38/428 (8%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+++ M G++LD Y +M+ +K G+ + E + L +P + +Y + +
Sbjct: 524 LFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNL--SPDAV-VYNVFIN 580
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L G+ EA F ++M+ G+ D + Y ++I + + A +L KE + +
Sbjct: 581 CLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKP 640
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR--------- 378
+ LV+ +E G+V+K ++ M +A + ++ S R
Sbjct: 641 NLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIH 700
Query: 379 ------GYWAAVKVY--------------------EQLISQGCIPGQVTYASIINAYCRI 412
G A + VY ++++++G P +T+ ++I +C+
Sbjct: 701 ELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKS 760
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+ A ++ +M +G + +++++ GRI +A +++ MK G EPN Y
Sbjct: 761 SHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTY 820
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+ L+ + + N + +L+ EM + P +Y +++S + +A + + ++E +
Sbjct: 821 DILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKR 880
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
G + + I++ +SKL E+ LL+DMK G K + S A G+ +
Sbjct: 881 RGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGE 940
Query: 593 AQWLQQNF 600
A+ L +
Sbjct: 941 ARRLLKTL 948
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 168/371 (45%), Gaps = 10/371 (2%)
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G++ +A + + + R +D + L D K AL M +G+ D
Sbjct: 166 VGEAAALAEMLV--RGRGIDG--LDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALD 221
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDV 351
Y SL+ F + A E+ + + G+ +P V L+ Y + +++ +
Sbjct: 222 VVGYNSLVAGFFHSGDADAALEVVERMKADGV--EPNVVTYTALIGEYCKGKGMDEAFSL 279
Query: 352 VESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
E M + + + D ++ A+V+G + + A ++ ++ G P VTY ++I++
Sbjct: 280 YEGMVRSGV-LPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLA 338
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ S++ + EM +G +V Y++++ GK G+I +A ++ ++ PN
Sbjct: 339 KARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFV 398
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
Y L+D H RA N+ E++ +ME + V P+ V+++++I+ + + +
Sbjct: 399 TYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKM 458
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
+ +G + G ++ F K E + + +DM EG + + + S +N LR G
Sbjct: 459 KDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNI 518
Query: 591 MQAQWLQQNFE 601
A+ L ++ +
Sbjct: 519 EGAEALFKDMD 529
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 3/225 (1%)
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ--VTYASIINAYCRIALYSKAEKVFI 423
+S A+V G + A + E L+ I G V + ++I+ YC++ + A V
Sbjct: 153 VSTALV-GLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVE 211
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M +G VV Y+S+VA + +G A+ +V +MKA G EPNV Y +L+ + + K
Sbjct: 212 RMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGK 271
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ + L++ M R V PD V+ + ++ R +F + E G +
Sbjct: 272 GMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYC 331
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
++ +K + E + LL +M S G +D +Y + M+ L G
Sbjct: 332 TLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEG 376
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/386 (18%), Positives = 166/386 (43%), Gaps = 12/386 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ + I L K+ S ++ + + PD T + ++A+ R K A L
Sbjct: 570 PDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKL 629
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ + + L+ + + + G + + + +M SAG S + ++++A
Sbjct: 630 LKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSG 689
Query: 234 IGDSEKVAAL--FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ + + + D T ++T ++ + C G A A +M +GI
Sbjct: 690 SRRPDVILEIHELMMGAGLHADITVYNTLVHVLCC-----HGMARNATVVLDEMLTRGIA 744
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC-LKLVLMYIEE-GLVEKTL 349
D + +LI + + A ++ + +G+ P + +L +E G + +
Sbjct: 745 PDTITFNALILGHCKSSHLDNAFAIYAQMLHQGL--SPNIATFNTLLGGLESAGRIGEAD 802
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
V+ MK L+ ++ +V G++K+ A+++Y +++S+G IP TY S+++ +
Sbjct: 803 TVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDF 862
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ + ++A+++F EM+++G Y ++ + K + L+ MK G +P+
Sbjct: 863 AKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSK 922
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEM 495
+S+ R + +L K +
Sbjct: 923 GTISSMSRAFSRPGMTGEARRLLKTL 948
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 178/403 (44%), Gaps = 26/403 (6%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
A+ A N + G K + + VY M + G + Y +++ + GD K LF
Sbjct: 157 AMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLF 216
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E +K+ T +Y IL L R EA FR M+ G+L + Y +++ +
Sbjct: 217 DEMIEKKIFPTVV---IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
I VK A EL+ E G+L P V + G++ L + M +A+ + D
Sbjct: 274 CKIAHVKKALELYXEMLGDGLL--PNV--------VTFGILIDGLCKTDEMVSARKFLID 323
Query: 365 CISCAIV----------NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
S +V +G+ K A+ ++ ++ +P TY+ +I C +
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+A+ + EM++KGF V Y++++ Y K G + A+ + ++M KG EPN+ +++
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L+D + +A + L+ EM + + PD V+YT +I + + + + E + G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLL---QDMKSEGTKLDE 574
+ ++ K +I + +KL + G+K +E
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNE 546
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 190/452 (42%), Gaps = 52/452 (11%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA----RKFKI 170
P +++ LV+ ++D++ + D P+ T L+ C R + F++
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215
Query: 171 ANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ +++ I + + G +++ S ++ M+++G++ + Y +M+
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAES---MFRTMRNSGMLPNLYTYNTMMDG 272
Query: 231 YYKIGDSEKVAALFLE--------------------CKS------RK--LDSTPFST--- 259
Y KI +K L+ E CK+ RK +D F
Sbjct: 273 YCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPN 332
Query: 260 -HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
+Y L D K+G EAL ++++ IL D Y+ LI + ++ A+ L +
Sbjct: 333 IFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQ 392
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E ++KG L + L+ Y +EG +EK ++V M ++ + +++G+ K
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG 452
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
AA+ +Y +++ +G +P V Y ++I+ + + +A ++ EMQ+ G V S
Sbjct: 453 KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLS 512
Query: 439 SMVAMYGKTGRIRDAMWL-------------VAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
++ K GRI DA+ L ++ C PN +Y +L+ +
Sbjct: 513 CLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRI 572
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+ K + +M + PD + +I + RA
Sbjct: 573 FKASKFFSDMRCSGLRPDVFTCIVIIQGHFRA 604
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 24/227 (10%)
Query: 329 PEVCLKLVLMYIEEGLVEKTL------DVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
P V L++ + E GLVE+ L DV+ +M+ + +++G K+ +
Sbjct: 126 PNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNM---------VLDGLVKKGRFDT 176
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
KVY ++++G P VTY ++I+ CR + KA ++F EM +K VV Y+ ++
Sbjct: 177 MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR 236
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
RI +A + M+ G PN++ YN++MD + + ++++ +L+ EM + P
Sbjct: 237 GLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLP 296
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+ V++ +I + E KF +ID A G++ +F
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKF---------LIDMASFGVVPNIF 334
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 146/343 (42%), Gaps = 37/343 (10%)
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
K+D P + ++ D L K GR K + DM +G + Y +LI +
Sbjct: 151 KMDVLP-AMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDF 209
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A LF E EK + P V + +L+ GL ++ +IS+
Sbjct: 210 LKAFRLFDEMIEKKIF--PTVVIYTILI---RGLCGES------------RISE------ 246
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
A ++ + + G +P TY ++++ YC+IA KA +++ EM G
Sbjct: 247 ------------AESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGL 294
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
VV + ++ KT + A + M + G PN+++YN L+D + +A NL +
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALS 354
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L E+E+ ++ PD +Y+ +I + E + G + + ++ +
Sbjct: 355 LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYC 414
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
K +E+ +++ M +G + + + + ++ AG +M+A
Sbjct: 415 KEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG-KMEA 456
>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 173/362 (47%), Gaps = 8/362 (2%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + R L ++ Y L S GK G AL + + M++ + D +Y++LI
Sbjct: 176 GLFDEMRQRALAPDRYT---YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLI 232
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A +F + G+ D ++ +Y + L + +++ M A +
Sbjct: 233 ELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVL 292
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ +++ + + + A+ V+ ++ C T +I+ Y ++ + +A+++
Sbjct: 293 PNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRL 352
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F +++ + VV+Y++++ +YG+ +A+ L M+ K E NV YN+++ ++G+
Sbjct: 353 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L +EM+ R + P+ ++Y+T+IS + +A + D + + R +G ID+ +
Sbjct: 413 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVL 472
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL-QQNF 600
M+ + ++ + +LL ++K D +A+ L AG +A W+ +Q F
Sbjct: 473 YQTMIVAYERVGLMGHAKRLLHELKLP----DNIPRETAITILAKAGRTEEATWVFRQAF 528
Query: 601 EG 602
E
Sbjct: 529 ES 530
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 224/501 (44%), Gaps = 45/501 (8%)
Query: 80 AKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPE---KSTLKLLIRYLVQSKKWDSI 136
AK+FD HG+ + + + LA D Y + + F E S L L Q + D +
Sbjct: 168 AKQFD-IAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWL-----QKMEQDRV 221
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
S D +Y+ L + SR + C ++ I + L + IT L+A+NS + Y
Sbjct: 222 ---SGDLVLYSNLIE---LSRRL--CDYSKAISIFSRLKRSGITPD---LVAYNSMINVY 270
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK--LDS 254
K ++ L+ ++M AG++ ++ Y ++ Y + + ++F E K LD
Sbjct: 271 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDL 330
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
T + I+ D G+ EA + F +++ I +P++ S+ +I V
Sbjct: 331 TTCN-----IMIDVYGQLDMVKEADRLFWSLRKMDI--EPNV-----VSYNTILRVYGEA 378
Query: 315 ELFKEA-------EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
ELF EA + K + ++ ++ +Y + EK ++V+ M++ ++ +
Sbjct: 379 ELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITY 438
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
I++ + K A ++++L S G QV Y ++I AY R+ L A+++ E++
Sbjct: 439 STIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKL 498
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
+ + + + K GR +A W+ + G ++ ++ +++++ R +
Sbjct: 499 PD----NIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVN 554
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
V +++++M PD V++AY + REF+ Y E + G V + M+
Sbjct: 555 VIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLS 614
Query: 548 VFSKLSQIEELVKLLQDMKSE 568
++S E + L Q ++S+
Sbjct: 615 LYSSKKDFEMVESLFQRLESD 635
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 87/181 (48%), Gaps = 8/181 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P Y ++ R + A +F EM+Q+ YS+++ +GK G A+
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ KM+ ++ +Y++L+++ R + + ++ ++R +TPD V+Y ++I+ Y +
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 517 A---REFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
A RE + +K NE GV+ ++ ++ V+ + + E + + +MK L
Sbjct: 273 AKLFREARLLIKEMNE----AGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 328
Query: 573 D 573
D
Sbjct: 329 D 329
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 105/259 (40%), Gaps = 44/259 (16%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+++K++S+G+ +D Y ++ AY ++G L E K D+ P T +
Sbjct: 457 LFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLP--DNIPRETAI-----T 509
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L K+GR EA FR E G ++D S++ +I
Sbjct: 510 ILAKAGRTEEATWVFRQAFESGEVKDISVFGCMIN------------------------- 544
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+Y ++V E M+ A + ++N + K+R + A VY
Sbjct: 545 ----------LYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVY 594
Query: 388 EQLISQGCI-PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
++ +GC+ P +V + +++ Y + E +F ++ + + A+Y +
Sbjct: 595 REMQEEGCVFPDEVHF-QMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYER 653
Query: 447 TGRIRDAMWLVAKMKAKGC 465
++ DA ++ +M+ +G
Sbjct: 654 ADKLNDASRVMNRMRERGI 672
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 62/130 (47%)
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+V+ YN ++ RAK L+ EM +R + PD+ +Y+T+I+++ + FD + +
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ + D + ++ + +L + + + +K G D Y+S +N
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 587 AGLQMQAQWL 596
A L +A+ L
Sbjct: 273 AKLFREARLL 282
>gi|302815687|ref|XP_002989524.1| hypothetical protein SELMODRAFT_41495 [Selaginella moellendorffii]
gi|300142702|gb|EFJ09400.1| hypothetical protein SELMODRAFT_41495 [Selaginella moellendorffii]
Length = 523
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 160/352 (45%), Gaps = 14/352 (3%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S + L +SL K+G+ A+K F M G ED Y ++ + S + A +
Sbjct: 140 SAKTFVKLAESLCKAGKEDIAVKLFDRMGANGAPEDIHTYHCVVDAITSFGRIDHATAVL 199
Query: 318 KEAEEKGMLRDPEVC-LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ E+ + V +++ + G ++K L + MKN++ ++NGF K
Sbjct: 200 EAMEQSDCCKPDTVTYTRMIDGFCRRGELDKALVIYSRMKNSESSPDVVTFGCLINGFCK 259
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A+ + + + G P ++TY+SII+ C + L+ A VF +Q+ +
Sbjct: 260 ALKFDEAIIILKASLDAGLEPDEITYSSIIDPLCNLELWDIALVVFELARQRNCPGSIYL 319
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKM--------KAKG---CEPNVWIYNSLMDMHGRAKNL 485
YS ++ K G+I +A+ L+ M +A G C+P + IYN+++D + +
Sbjct: 320 YSRLMNCLCKAGKIEEAVLLLEDMSHGRKHSGQALGGEVCKPTLVIYNNVIDAFCQENRI 379
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GI 544
+ ++ K ME + + D V+YT+ + A + D K +G IA
Sbjct: 380 EEALQMAKAMEEQGIGADVVTYTSFLRALCKVGMVDEACKLLEMMATSGSSFPDVIACNA 439
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+VG F +++EE LL+ M G + D+ Y + AL A +M+A L
Sbjct: 440 LVGAFCSAARVEEACNLLRAMLEHGIEPDDLTYTQVIGALC-ASKRMEAAML 490
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 190/452 (42%), Gaps = 61/452 (13%)
Query: 80 AKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSL 139
A+ ++S + + + QE+ ++ E + F PE ST LL+R +
Sbjct: 70 ARIYNSVFKALDRMHRFQEV-FEMVEELIEQENFVPEDSTADLLVRIYCKG--------- 119
Query: 140 SEDFKIYNVLPDAHTCSRLVASCVR--ARKF-KIANTLLQVFITDGEIALLAFNSAMGGY 196
+ V A RLV + VR A+ F K+A +L + D + L A G
Sbjct: 120 ------FAVDKGAWFLGRLVNAGVRVSAKTFVKLAESLCKAGKEDIAVKLFDRMGANGAP 173
Query: 197 NKLHMYY---STILVYEKMKSAGIVL-----------DSGCYCQIMEAYYKIGDSEKVAA 242
+H Y+ I + ++ A VL D+ Y ++++ + + G+ +K A
Sbjct: 174 EDIHTYHCVVDAITSFGRIDHATAVLEAMEQSDCCKPDTVTYTRMIDGFCRRGELDK--A 231
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L + + + +S+P + L + K+ + EA+ + + G+ D Y+S+I
Sbjct: 232 LVIYSRMKNSESSP-DVVTFGCLINGFCKALKFDEAIIILKASLDAGLEPDEITYSSIID 290
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
++ +A +F+ A ++ + +L+ + G +E+ + ++E M + +
Sbjct: 291 PLCNLELWDIALVVFELARQRNCPGSIYLYSRLMNCLCKAGKIEEAVLLLEDMSHGR--- 347
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
K G + L + C P V Y ++I+A+C+ +A ++
Sbjct: 348 -------------KHSG--------QALGGEVCKPTLVIYNNVIDAFCQENRIEEALQMA 386
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE-PNVWIYNSLMDMHGR 481
M+++G VV Y+S + K G + +A L+ M G P+V N+L+
Sbjct: 387 KAMEEQGIGADVVTYTSFLRALCKVGMVDEACKLLEMMATSGSSFPDVIACNALVGAFCS 446
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
A + + L + M + PD ++YT VI A
Sbjct: 447 AARVEEACNLLRAMLEHGIEPDDLTYTQVIGA 478
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 128/317 (40%), Gaps = 16/317 (5%)
Query: 150 PDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILV 208
PD T +R++ C R K ++ ++ ++ F + G+ K + I++
Sbjct: 210 PDTVTYTRMIDGFCRRGELDKALVIYSRMKNSESSPDVVTFGCLINGFCKALKFDEAIII 269
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+ AG+ D Y I++ + + +F + R + P S ++Y L +
Sbjct: 270 LKASLDAGLEPDEITYSSIIDPLCNLELWDIALVVFELARQR---NCPGSIYLYSRLMNC 326
Query: 269 LGKSGRAFEALKFFRDMKEK---------GILEDPS--IYASLICSFASITEVKLAEELF 317
L K+G+ EA+ DM G + P+ IY ++I +F ++ A ++
Sbjct: 327 LCKAGKIEEAVLLLEDMSHGRKHSGQALGGEVCKPTLVIYNNVIDAFCQENRIEEALQMA 386
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC-AIVNGFSK 376
K EE+G+ D + + G+V++ ++E M + D I+C A+V F
Sbjct: 387 KAMEEQGIGADVVTYTSFLRALCKVGMVDEACKLLEMMATSGSSFPDVIACNALVGAFCS 446
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
A + ++ G P +TY +I A C A +F M+ +
Sbjct: 447 AARVEEACNLLRAMLEHGIEPDDLTYTQVIGALCASKRMEAAMLLFEYMKVANHTPKLTT 506
Query: 437 YSSMVAMYGKTGRIRDA 453
Y ++ G ++DA
Sbjct: 507 YKELMLGLYVNGSLQDA 523
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/481 (21%), Positives = 204/481 (42%), Gaps = 39/481 (8%)
Query: 120 LKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
L +IR L +K +++ K P A + ++ + +++ + L
Sbjct: 162 LSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMS 221
Query: 180 TDG--EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
+G + + +++ + + KL S I + +MK G+ + Y I+ ++K+ +
Sbjct: 222 NEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNV 281
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
+LF E + F+ Y L LGK+GR EA F+ +M+ +G D +
Sbjct: 282 HGALSLFEEMRYMYCRPDVFT---YTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVM 338
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++I + +LF EE G+ C+ V+ Y +++++
Sbjct: 339 NNMINFLGKAGRLDDGLKLF---EEMGVSH----CIPNVVTYN---------TIIKALFE 382
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+K ++S+ S W +E++ G P TY+ +I+ +C+ K
Sbjct: 383 SKSRVSEVFS-------------W-----FERMKGSGISPSPFTYSILIDGFCKTNRIEK 424
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A + EM +KGF C AY S++ GK R A L ++K + +Y ++
Sbjct: 425 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIK 484
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
G+A L L+ EM + TP+ +Y ++S RA D + + + +G +
Sbjct: 485 HLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLP 544
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQ 597
D I++ +K +++L +MK+ K D Y++ ++AL AG+ +A L
Sbjct: 545 DINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELM 604
Query: 598 Q 598
+
Sbjct: 605 K 605
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 153/375 (40%), Gaps = 13/375 (3%)
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
G EKV L+ E S + P T Y L + K GR A++ +MKE G+
Sbjct: 208 GQYEKVHELYNEM-SNEGHCQP-DTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTA 265
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
IY +I F + V A LF+E D +L+ + G +++
Sbjct: 266 KIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHE 325
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
M+ K + ++N K +K++E++ CIP VTY +II A L
Sbjct: 326 MQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKA-----L 380
Query: 415 YSKAEKV------FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+ +V F M+ G YS ++ + KT RI AM L+ +M KG P
Sbjct: 381 FESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPC 440
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
Y SL+D G+AK +L++E++ + Y +I +A D + ++
Sbjct: 441 PAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFD 500
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E G + ++ ++ ++E + ++ M+ G D Y+ +N L G
Sbjct: 501 EMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTG 560
Query: 589 LQMQAQWLQQNFEGT 603
+A + N + +
Sbjct: 561 GPHRAMEMLTNMKNS 575
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA---YSSMVAMYGKTGRIRDAMWLV 457
TY ++I+ + Y + K+ EM + CVV S ++ M G I A+ +
Sbjct: 125 TYMALIHCLELVEQYGEMWKMIQEMVRSPI--CVVTPMELSQVIRMLGNAKMIGKAITIF 182
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR-KVTPDKVSYTTVISAYNR 516
++KA+ C+P YNS++ M +V +L+ EM PD V+Y+ +ISA+ +
Sbjct: 183 YQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCK 242
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
D ++ NE + NG I +++ +F KL + + L ++M+ + D
Sbjct: 243 LGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFT 302
Query: 577 YHSAMNALRDAG 588
Y + L AG
Sbjct: 303 YTELIRGLGKAG 314
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 84/216 (38%), Gaps = 36/216 (16%)
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM-- 443
+ E + S C+ + + +I + KA +F +++ + AY+SM+ M
Sbjct: 146 IQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLI 205
Query: 444 ----------------------------------YGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ K GR A+ L+ +MK G +P
Sbjct: 206 HEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTA 265
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
IY ++ + + N+ L++EM PD +YT +I +A D FY+E
Sbjct: 266 KIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHE 325
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+ G D + M+ K ++++ +KL ++M
Sbjct: 326 MQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEM 361
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 145/333 (43%), Gaps = 11/333 (3%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y + K G+ +A + +D K KG + D Y SLI ++ A LF+EA
Sbjct: 296 YNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEAL 355
Query: 322 EKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
KG+ P + L L+ ++GLV K L ++ M + ++NG K
Sbjct: 356 GKGL--KPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGC 413
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A + I++G +P T+ ++I+ YC+ A + M G V+ Y+S
Sbjct: 414 VSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNS 473
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ K + D M + KGC PN+ YN L++ +A+ + + L +E+ R
Sbjct: 474 ILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRG 533
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFY----NEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ PD VS+ TVIS + + D + + ++R+ V A IM+ FS+ +
Sbjct: 534 LIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTV---ATYNIMINAFSEKLDM 590
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ KL +M +G D Y ++ G
Sbjct: 591 DMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVG 623
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/426 (19%), Positives = 190/426 (44%), Gaps = 5/426 (1%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTI 206
+ PD T + + S R ++ A LL + G E+ + + + + G+ + +
Sbjct: 142 IAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAY 201
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMY-KIL 265
++ KM GI + ++M K G ++ L + + F+ +++ + L
Sbjct: 202 ELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGL 261
Query: 266 CDS---LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
C G + + EA + M KG+ D Y ++I ++ + +++ A + K+A+
Sbjct: 262 CRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKF 321
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
KG + D L++ ++G ++ L + E LK S + ++ G S++
Sbjct: 322 KGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLK 381
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+++ + +G P TY +IN C++ S A + KG+ + +++++
Sbjct: 382 ALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLID 441
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
Y K ++ +A+ ++ M + G P+V YNS+++ +A V + +K + + P
Sbjct: 442 GYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLP 501
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ ++Y +I + +AR+ + E R G + D G ++ F ++E +L
Sbjct: 502 NIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLF 561
Query: 563 QDMKSE 568
+ M+ +
Sbjct: 562 RRMEQQ 567
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 156/400 (39%), Gaps = 40/400 (10%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
+D+ + VPD + S + G+ +D A + EA +P LI+ L
Sbjct: 317 KDAKFKGFVPDEFTYCSLIIGVCQDGDIDH-ALALFEEALG-KGLKPSIVLYNTLIKGLS 374
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LL 187
Q + L D + PD T + ++ + AN LL I G + +
Sbjct: 375 QQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIF 434
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
FN+ + GY K + I + + M S G+ D Y I+ K E V F
Sbjct: 435 TFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMI 494
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+ + Y IL +SL K+ + EAL +++ +G++ DP + ++I F +
Sbjct: 495 MEKGCLPNIIT---YNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNN 551
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++ A +LF+ E++ +C + I
Sbjct: 552 GDLDEAYQLFRRMEQQ-----YRICHTVATYNI--------------------------- 579
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++N FS++ A K++ ++ +GC P TY +I+ +C++ + ++ +
Sbjct: 580 --MINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIE 637
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
GF + + ++ R+ +A+ +V M G P
Sbjct: 638 IGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVP 677
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/342 (18%), Positives = 147/342 (42%), Gaps = 23/342 (6%)
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR-- 327
G+ G+ EA+ F M +PSI+ S+ +I + + F +A K LR
Sbjct: 87 GRKGKVQEAVDVFERMDFYNC--EPSIF-----SYNAIMNILVEYGYFNQAH-KVYLRMK 138
Query: 328 ----DPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
P+VC + + + L ++ +M + +++ + C +++GF +
Sbjct: 139 HEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQV 198
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A +++ +++ G P T+ +++ C+ + EK+ ++ + G + ++ +
Sbjct: 199 EAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFI 258
Query: 442 -------AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ G ++ +A + KM KG EP+ + YN+++ + + ++ ++ K+
Sbjct: 259 QGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKD 318
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+ + PD+ +Y ++I + + D + + E G + ++ S+
Sbjct: 319 AKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGL 378
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + ++L+ DM EG D Y+ +N L G A L
Sbjct: 379 VLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNL 420
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 102/227 (44%), Gaps = 17/227 (7%)
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+ ++ AV V+E++ C P +Y +I+N +++A KV++ M+ +G
Sbjct: 86 YGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPD 145
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE--KL 491
V ++ + + +T R A+ L+ M ++GCE N +Y +++ G + QVE +L
Sbjct: 146 VCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVIS--GFYEENYQVEAYEL 203
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG--------GVIDRAIA- 542
+ +M R + P ++ ++ + K N+ NG + + +
Sbjct: 204 FNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCR 263
Query: 543 -GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G++ G SK+ + E L M ++G + D+ Y++ + G
Sbjct: 264 KGVLEGANSKVVEAE---NYLHKMVNKGLEPDDFTYNTIIYGYSKVG 307
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 97/230 (42%), Gaps = 53/230 (23%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+I N K G+ Y+++I + G+ + E+V +EM+
Sbjct: 25 SIFNSVKKEDGFKHTFLTYKRMIEKLGFHGE---------------FDAMERVLMEMRLN 69
Query: 429 GFDKCVV--AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
D ++ Y S + YG+ G++++A+ + +M CEP+++ YN++M++
Sbjct: 70 -VDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFN 128
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
Q K++ M+ + PD ++T I ++ R + R +A +
Sbjct: 129 QAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTK--------------------RPLAAL-- 166
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL +M S+G +L+ +Y + ++ + Q++A L
Sbjct: 167 -------------RLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYEL 203
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 174/393 (44%), Gaps = 39/393 (9%)
Query: 158 LVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGI 217
LVASCV K AN F + G K + + ++M G
Sbjct: 409 LVASCV-LNKINTAN----------------FARCLCGVGKFEKAFQIV---KEMMRKGF 448
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFE 277
V D+ Y +++ + +K LF E K K+ P + Y IL DS K+G +
Sbjct: 449 VPDASTYTKVITFLCQAKRVDKAFLLFQEMK--KVGVNP-DVYTYTILIDSFCKAGLIEQ 505
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
A +F +M+ G + Y +L+ ++ ++ A ++F + L+
Sbjct: 506 AQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALID 565
Query: 338 MYIEEGLVEK----------TLDVVESMKNAKLKISDCIS------CAIVNGFSKRRGYW 381
+ G ++K T D +ES + K +D IS A+VNG K +
Sbjct: 566 GLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVS 625
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A + + +++ GC P Q+ Y ++++ +C++ A++VF+ M + G+ V Y+S++
Sbjct: 626 DAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLI 685
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
K GR+ AM ++++M C PNV Y +++D + + L ME++ +
Sbjct: 686 DRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCS 745
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
P+ V+YT +I +A + D ++ + + + G
Sbjct: 746 PNVVTYTALIDGLGKAGKVDAGLELFMQMKTKG 778
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/511 (20%), Positives = 199/511 (38%), Gaps = 85/511 (16%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ ST +I +L Q+K+ D L ++ K V PD +T + L+ S +A + A
Sbjct: 448 FVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQ 507
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + G ++ + + + Y K Y ++ +M ++ Y +++
Sbjct: 508 SWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGL 567
Query: 232 YKIGDSEKVAALFLEC-------------KSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
K G+ +K ++ + + + D+ + Y L + L K+ + +A
Sbjct: 568 CKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDA 627
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
M G + +Y +L+ F + E+ A+E+F + G L P V
Sbjct: 628 HDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYL--PSV------- 678
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+ L+++ K+ +L + A+KV Q++ C P
Sbjct: 679 HTYTSLIDRMF------KDGRLDL--------------------AMKVLSQMLKDSCNPN 712
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
VTY ++++ C+ KA + M++KG VV Y++++ GK G++ + L
Sbjct: 713 VVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFM 772
Query: 459 KMKAKGCEPNVWIYNSLMD---------------------------------MHGRAKNL 485
+MK KGC PN Y L++ + G +K
Sbjct: 773 QMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRF 832
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
L +EME P Y +I ++++A + ++ + E ++ A +
Sbjct: 833 LASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMH 892
Query: 546 VGVFSKL---SQIEELVKLLQDMKSEGTKLD 573
+ L SQ+EE V L +M+ G D
Sbjct: 893 TSLIQALCLSSQVEEAVALYSEMRRRGIVPD 923
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A KVYE+++ C+ ++ A+ C + + KA ++ EM +KGF Y+ ++
Sbjct: 401 AEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVIT 460
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ R+ A L +MK G P+V+ Y L+D +A + Q + + EM +P
Sbjct: 461 FLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSP 520
Query: 503 DKVSYTTVISAYNRAREF 520
+ V+YT ++ AY ++++
Sbjct: 521 NVVTYTALLHAYLKSKQL 538
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 130/329 (39%), Gaps = 10/329 (3%)
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
EAL+ +K+ G Y +L+ AS +V++A + KE G D
Sbjct: 187 EALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFA 246
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
+EG LD++E K+ + +++G + + A+ ++ I
Sbjct: 247 QALCKEGRWGDALDLLE---REDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYI 303
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P VTY +++ + + +++ M +G + ++S+V Y A L
Sbjct: 304 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKL 363
Query: 457 VAKMKAKGCEPNVWIYNSLM-DMHGR-----AKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
+M GC P +YN + + GR + L EK+++EM +K++
Sbjct: 364 FNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANF 423
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
+F+ + E G V D + ++ + ++++ L Q+MK G
Sbjct: 424 ARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGV 483
Query: 571 KLDERLYHSAMNALRDAGLQMQAQ-WLQQ 598
D Y +++ AGL QAQ W +
Sbjct: 484 NPDVYTYTILIDSFCKAGLIEQAQSWFDE 512
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 133/333 (39%), Gaps = 11/333 (3%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S Y L L +G+ A + ++M G D S S + A +L
Sbjct: 203 SAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLL 262
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+ + K D +C +++ +E L + + + M+ + ++ GF K+
Sbjct: 263 EREDFK---LDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKK 319
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
+ ++ ++++GC P + S+++ YC Y+ A K+F M G V Y
Sbjct: 320 KQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVY 379
Query: 438 SSMV-AMYGKTGRIRDAMWLVA-----KMKAKGCEPN-VWIYNSLMDMHGRAKNLRQVEK 490
+ + ++ G+ + +A +M C N + N + G K + +
Sbjct: 380 NIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGK-FEKAFQ 438
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
+ KEM R+ PD +YT VI+ +A+ D + E + G D I++ F
Sbjct: 439 IVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFC 498
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
K IE+ +M+S G + Y + ++A
Sbjct: 499 KAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHA 531
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 141/371 (38%), Gaps = 49/371 (13%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYST 205
+ P+ T LV +A+K A+ LL + G E + +++ + G+ K+ S
Sbjct: 603 TISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSA 662
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL-DSTPFSTHMYKI 264
V+ +M G + Y +++ +K G + L ++ S+ L DS + Y
Sbjct: 663 QEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLD----LAMKVLSQMLKDSCNPNVVTYTA 718
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
+ D L K+G +AL M++KG + Y +LI +V ELF + + KG
Sbjct: 719 MVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKG 778
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ L+ GL++ +++ MK V GFSKR + A++
Sbjct: 779 CAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKR--FLASL 836
Query: 385 KVYEQLISQGCIPGQVTYA--------------------------------------SII 406
+ E++ S P Y S+I
Sbjct: 837 GLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLI 896
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
A C + +A ++ EM+++G + A+ +V + + +A+ L + +G
Sbjct: 897 QALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGVN 956
Query: 467 PNVWIYNSLMD 477
W N D
Sbjct: 957 ---WEGNKFCD 964
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/491 (21%), Positives = 194/491 (39%), Gaps = 47/491 (9%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
P T + L+ + R + A L + + G FNS + GY + +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH--MYKILC 266
++KM G D+ Y ++E + + G ++ LF R+L+ TH + K LC
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELF-----RELEQPDMYTHAALVKGLC 241
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
D+ R E L + MKE G YA+L+ + + + AE++ E + G++
Sbjct: 242 DA----RRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLV 297
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS----------- 375
C +V Y EG + + V ESMK + + A+V GF
Sbjct: 298 PCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMAL 357
Query: 376 ----KRRGYWAAVKVYEQLISQGCIPG--------------------QVTYASIINAYCR 411
+ G V Y LI CI G Q TY +I+A C+
Sbjct: 358 LDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCK 417
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+A +F ++ +G V +++++ K G+ A + KM + GC P+ +
Sbjct: 418 TGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYT 477
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y+ ++ + K R+ EM ++ V P V+YT VI + R + + + + +
Sbjct: 478 YSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMV 537
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
G D V + ++ E ++ +MK G +D Y++ ++ G
Sbjct: 538 SLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTD 597
Query: 592 QAQWLQQNFEG 602
A + ++ G
Sbjct: 598 HAVTILKHMTG 608
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/474 (18%), Positives = 189/474 (39%), Gaps = 20/474 (4%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
+RP L+ + +K + + + ++P A TC+ +V + R + A
Sbjct: 261 WRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAV 320
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + G E + +N+ + G+ + Y + + ++M+ G+ D Y ++
Sbjct: 321 RVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQ 380
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
G E L + L + ++ Y +L D+L K+G+ EA F ++ +GI
Sbjct: 381 CIDGHIESAFRLLRLMEGNGLAADQYT---YNVLIDALCKTGKVDEACSLFDGLEYRGIR 437
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ + ++I + +A ++ G D + + + L
Sbjct: 438 PNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSF 497
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++ M +K S +++ K R Y A +++ Q++S GC P VTY + + AYC
Sbjct: 498 IDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCN 557
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN--- 468
+AE V +EM++ G +AY++++ + G+ A+ ++ M PN
Sbjct: 558 EGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFT 617
Query: 469 VWIYNSLMDMHGRAKN-------------LRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
+I + A++ L V +L++ M++ V +Y ++ ++
Sbjct: 618 FFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFS 677
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
R D + + + ++ I +V F KL + LL M G
Sbjct: 678 EERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHG 731
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 66/384 (17%), Positives = 147/384 (38%), Gaps = 24/384 (6%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
RP T +I L + K+D + E PD +T S + + + + +
Sbjct: 436 IRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGL 495
Query: 173 TLL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + ++ D + + + + + K Y ++ +M S G D Y + AY
Sbjct: 496 SFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAY 555
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
G + + +E K + + Y L D G+ A+ + M G+
Sbjct: 556 CNEGRLHEAENVVMEMKKGGIIVDAMA---YNTLIDGHTSIGKTDHAVTILKHMT--GVA 610
Query: 292 EDPSIYASLI------------------CSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
P+ + I S E+ ELF+ ++ + L
Sbjct: 611 SMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYL 670
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ 393
++ + EE +++ +V MK L +++ I ++VN F K R Y A + +I
Sbjct: 671 AILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGH 730
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G +P ++Y +++ + +A+++F ++ K ++ + + ++ + G
Sbjct: 731 GFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMC 790
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMD 477
+++ ++ C+P+ Y L +
Sbjct: 791 HDMISILEQMKCKPSDETYAMLTE 814
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 79/433 (18%), Positives = 156/433 (36%), Gaps = 71/433 (16%)
Query: 116 EKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL 175
++ T +LI L ++ K D SL + + + P++ T + ++ + KF +A T L
Sbjct: 404 DQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFL 463
Query: 176 QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG 235
EKM SAG D+ Y +E K
Sbjct: 464 ----------------------------------EKMVSAGCAPDTYTYSPFIENLCKTK 489
Query: 236 DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
S + + E + D P ST Y I+ D L K A + + M G D
Sbjct: 490 GSREGLSFIDEMLQK--DVKP-STVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVV 546
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
Y + + ++ + + AE + E ++ G++ D L+ + G + + +++ M
Sbjct: 547 TYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHM 606
Query: 356 KNAKLKISDCISCAIVNGFS-------------------KRRGYWAAVK---VYE--QLI 391
++ N F+ K W ++ V+E +L+
Sbjct: 607 TGVA---------SMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELM 657
Query: 392 SQGCIPGQV-TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+ +P Y +I+ + + + M++ Y+S+V + K
Sbjct: 658 KKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMY 717
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
DA L+ M G PN+ Y L+ + +++++ + ++ D++ + +
Sbjct: 718 PDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKII 777
Query: 511 ISAYNRAREFDMC 523
I R DMC
Sbjct: 778 IDGLIRQGHPDMC 790
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 173/392 (44%), Gaps = 13/392 (3%)
Query: 130 SKKWDSIVSLSEDFKIY------NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG- 182
S + + S+ E + Y V P+A + L+ +R+ K A + + G
Sbjct: 214 SDLMNRLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGV 273
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ ++ FN+ M G K + + M AGI D Y ++ K G +
Sbjct: 274 QPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAME 333
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
+F E R L+ +T + L D+ K G L+ +M +G+ D Y +L+
Sbjct: 334 MFEEMCERGLNP---NTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVN 390
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
F + ++K A ++ +E + G+ D L+ +EG ++ +++ + M + + +
Sbjct: 391 GFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVAL 450
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
D A+++G SK A ++ +++ G P TY +I+A+C+ K
Sbjct: 451 DDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHL 510
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
EMQ KG + +V Y+ ++ + G++++A L+ M G PN YN L+D H +
Sbjct: 511 KEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKH 570
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+R E+L + + D YT++I+ +
Sbjct: 571 GKVRDTEELKSA---KGMVSDFGVYTSLINEF 599
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
Query: 377 RRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
R G A+ + V+++++ +G P VT+ ++++ C+ + + A + M + G V
Sbjct: 254 RSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVY 313
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y + + KTGRI+DAM + +M +G PN + +L+D H + ++ +L EM
Sbjct: 314 TYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEM 373
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
R V D V+Y +++ + R R+ E R +G D+ ++ K ++
Sbjct: 374 ATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGEL 433
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ +++ Q+M EG LD+ Y + ++ L AG + A+
Sbjct: 434 DTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAE 472
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 108/244 (44%)
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
I G + +V + M ++ + +++G K A + + G P
Sbjct: 253 IRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDV 312
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
TY + I C+ A ++F EM ++G + V ++++ + K G + + L +
Sbjct: 313 YTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWE 372
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M +G + ++ YN+L++ R ++++ + +EM + + PDKV+YTT+I + E
Sbjct: 373 MATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGE 432
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
D ++ E G +D ++ SK + + ++L +M G + D Y
Sbjct: 433 LDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTM 492
Query: 580 AMNA 583
++A
Sbjct: 493 VIDA 496
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/325 (18%), Positives = 133/325 (40%)
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
P + +L + +SG+ A F +M +G+ + +L+ +++ A
Sbjct: 237 GVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNA 296
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L + G+ D + + G ++ +++ E M L + + +++
Sbjct: 297 NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDA 356
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
K A +++ ++ ++G V Y +++N +CR+ A + EM++ G
Sbjct: 357 HCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPD 416
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V Y++++ K G + AM + +M +G + Y +L+ +A E++
Sbjct: 417 KVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILC 476
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
EM + PD +YT VI A+ + + K E + G +++ F L
Sbjct: 477 EMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLG 536
Query: 554 QIEELVKLLQDMKSEGTKLDERLYH 578
Q++ LL M + G ++ Y+
Sbjct: 537 QMKNADMLLNAMLNIGVCPNDITYN 561
>gi|255661162|gb|ACU25750.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 426
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 160/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRXEEATWV 342
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 151/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G+ + L+ MY+E + L V M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRX 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 161/353 (45%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG+ ++ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ +A + + GR +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPDNIPRDIA----IHILAGAGRXEEATWVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + EFD Y E + G V
Sbjct: 370 KYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 144/319 (45%), Gaps = 14/319 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG---LVEKTLD 350
+Y ++I ++ V A+ L E L+ P+ + + ++I G E T
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDIAIHILAGAGRXEEATWV 342
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+++ ++K + +++ FSK + Y V+V++++ G P A ++NAY
Sbjct: 343 FRQAIDAGEVK-DITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYG 401
Query: 411 RIALYSKAEKVFIEMQQKG 429
++ + KA V++EMQ+ G
Sbjct: 402 KLHEFDKANDVYMEMQEVG 420
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRXEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 188/439 (42%), Gaps = 40/439 (9%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTI 206
++PD +T S LV + + + + + LL+ + G + + ++N + Y +L +
Sbjct: 273 IVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAM 332
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
V+ +M++AG V ++ Y ++ Y K G + V +FLE K D Y IL
Sbjct: 333 DVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDP---DAGTYNILI 389
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
G+ G E + F DM E+ + + Y LI + + G+
Sbjct: 390 QVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACG----------------KGGLY 433
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D + K++L E+G+V S ++ F + Y A+ V
Sbjct: 434 EDAK---KILLHMNEKGIVP----------------SSKAYTGVIEAFGQAALYEEALVV 474
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ + G P TY S I+A+ R LY +AE + M + G + V +++ ++ + +
Sbjct: 475 FNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQ 534
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G+ +A+ +M+ CEPN ++ ++ A + + E+ ++E++ + P +
Sbjct: 535 GGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMC 594
Query: 507 YTTVISAYNRAREFDMCVKFYNE-FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
Y +++ Y + + +E M I + I ++ G F S + + + +
Sbjct: 595 YCLMLALYAKNDRLNDAYNLIDEMITMRVSDIHQGIGQMIKGDFDDESNWQIVEYVFDKL 654
Query: 566 KSEGTKLDERLYHSAMNAL 584
SEG L R Y++ + AL
Sbjct: 655 NSEGCGLGMRFYNALLEAL 673
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 159/401 (39%), Gaps = 39/401 (9%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG-DSEKVAALFLEC 247
+ + + Y + +++++ + MK + Y ++ A + G D E + LF E
Sbjct: 174 YTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEM 233
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+ + + Y L + G EA FR M E GI+ D + Y+ L+ +F +
Sbjct: 234 RHEGIQPDVIT---YNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKL 290
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++ EL +E E G L D L+ Y E G +++ +D
Sbjct: 291 NRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMD----------------- 333
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
V+ Q+ + GC+ TY+ ++N Y + Y +F+EM+
Sbjct: 334 ------------------VFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKV 375
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
D Y+ ++ ++G+ G ++ + L M + EPN+ Y L+ G+
Sbjct: 376 SNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYED 435
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+K+ M + + P +YT VI A+ +A ++ + +N G +
Sbjct: 436 AKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIH 495
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
F++ +E +L M G K D ++ + A R G
Sbjct: 496 AFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGG 536
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 156/353 (44%), Gaps = 10/353 (2%)
Query: 249 SRKLDSTPFSTHM----YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS--IYASLIC 302
+R LD PF + + ++ + G +L+ F+ M+ + I P+ IY +I
Sbjct: 88 ARCLD--PFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQ-IWCKPNEHIYTIMIT 144
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+ E+F E G+ R V ++ Y G +L+++ MK ++
Sbjct: 145 LLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSP 204
Query: 363 SDCISCAIVNGFSKRRGYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
S ++N ++ W + ++ ++ +G P +TY +++ A L +AE V
Sbjct: 205 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMV 264
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M + G + YS +V +GK R+ L+ +M++ G P++ YN L++ +
Sbjct: 265 FRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAE 324
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
++++ ++++M+ + +Y+ +++ Y + +D + E +++ D
Sbjct: 325 LGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGT 384
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
I++ VF + +E+V L DM E + + Y + A GL A+
Sbjct: 385 YNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAK 437
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 156/389 (40%), Gaps = 41/389 (10%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+++M S G+ Y ++ AY + G L K ++ + + Y + +
Sbjct: 158 VFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILT---YNTVIN 214
Query: 268 SLGKSGRAFEAL-KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ + G +E L F +M+ +GI D Y +L+ + A AE +F+ E G++
Sbjct: 215 ACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIV 274
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D LV + + +EK +++ M+
Sbjct: 275 PDINTYSYLVQTFGKLNRLEKVSELLREME------------------------------ 304
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
S G +P +Y ++ AY + +A VF +MQ G YS ++ +YGK
Sbjct: 305 -----SGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGK 359
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
GR D + +MK +P+ YN L+ + G ++V L+ +M V P+ +
Sbjct: 360 HGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMET 419
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVI-DRAIAGIMVGVFSKLSQIEELVKLLQDM 565
Y +I A + ++ K G V +A G+ + F + + EE + + M
Sbjct: 420 YEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGV-IEAFGQAALYEEALVVFNTM 478
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
G+ Y+S ++A GL +A+
Sbjct: 479 NEVGSNPTVETYNSFIHAFARGGLYKEAE 507
>gi|403366299|gb|EJY82949.1| hypothetical protein OXYTRI_19434 [Oxytricha trifallax]
Length = 1420
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/564 (20%), Positives = 238/564 (42%), Gaps = 62/564 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQEL--AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
PD + + G+ + Q Q+L A+ YN+ + +F P++ +L+ + K+ D
Sbjct: 469 PDNYTYSTLFKGIKSENQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINCKQLDR 528
Query: 136 IVSLSEDFK---------------------------------IYN------VLPDAHTCS 156
V L + K + N + PD + +
Sbjct: 529 AVELFKQLKPQSQPQIQVSNTDDADNSLSLEDSPDSAKNAPAVVNSSNHHFMRPDEISFN 588
Query: 157 RLVASCVRARKFKIANTLLQVF----ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKM 212
++ C + +K ++A + + + ++ +NS + + + S + +M
Sbjct: 589 TIIKGCAQEKKLQLAFEMFNLMKMQCLKPNDV---TYNSLIDACVRCNRLNSAWQLLSEM 645
Query: 213 KSAGIVLDSGCYCQIM-----EAYYKIG-----DSEKVAALFLECKSRKLDSTPFSTHMY 262
+ IV D+ Y ++ E + G D EK AL + K P +Y
Sbjct: 646 QQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEI-LY 704
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEE 322
L D+ + A+ F++M+ I Y LI ++ S ++ A +FK+ ++
Sbjct: 705 NCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKD 764
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
++ + L+ ++ +E+ ++V E+MK ++++ I ++ GF+K
Sbjct: 765 NCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAKSFKLDQ 824
Query: 383 AVKVYEQLISQGCI-PGQVTYASIINAYCRIALYSKAEKVFIEMQQ--KGFDKCVVAYSS 439
A++VY+ + I P VT+ S+I+ R KA ++F EM+Q ++ YS+
Sbjct: 825 ALEVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEEMKQPISHTKPDLITYST 884
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
M+ + + I+ A+ ++ M+ + +YNSL+D +A + K++K ME K
Sbjct: 885 MIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCKANEIEMALKVYKNMEILK 944
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P V+Y+ +I Y + R + E + +G + ++ K Q++
Sbjct: 945 IKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRPGLIVYTCLLQTCIKSRQLKTAE 1004
Query: 560 KLLQDMKSEGTKLDERLYHSAMNA 583
+L DM+ +G + D+ Y + +N
Sbjct: 1005 QLFHDMRIQGIRGDQLTYQTMING 1028
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/483 (22%), Positives = 220/483 (45%), Gaps = 27/483 (5%)
Query: 57 NASTNFPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPE 116
+++ N P + +N +HH PD F++ + G ++ + Q LA++ +N K+ +P
Sbjct: 563 DSAKNAPAV-VNSSNHH-FMRPDEISFNTIIKGCAQEKKLQ-LAFEMFN-LMKMQCLKPN 618
Query: 117 KSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQ 176
T LI V+ + +S L + + N++PD T S L+ +RA + N +
Sbjct: 619 DVTYNSLIDACVRCNRLNSAWQLLSEMQQNNIVPDNFTYSTLIKG-IRAEN-QSQNGISN 676
Query: 177 VFITDGEIALL-AFNSAMGG-------YN-------KLHMYYSTILVYEKMKSAGIVLDS 221
+ ALL + GG YN + H + V+++M+ + I S
Sbjct: 677 PMDLEKAFALLEQMKQSNGGVKPDEILYNCLIDACVRFHDVNRAVAVFQEMQFSNIKPSS 736
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y +++AY G + ++ F K K + ++ Y L D+ K+ + A++
Sbjct: 737 VTYGILIKAY---GSANQLDNAFFVFKKMKDNCLIPNSVTYGCLIDACVKNNQIERAMEV 793
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK-LVLMYI 340
F MK G+ + I+ +LI FA ++ A E+++ + ++ V L+ I
Sbjct: 794 FETMKRDGVQLNTIIFTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDCCI 853
Query: 341 EEGLVEKTLDVVESMKN--AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
++K +++ E MK + K ++ GF + + A+ + + +
Sbjct: 854 RCNSIKKAMEIFEEMKQPISHTKPDLITYSTMIKGFCREKNIQQALIMLNDMEKNNIMAD 913
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+V Y S+++ C+ A KV+ M+ V YS ++ +YGK + A+ ++
Sbjct: 914 EVLYNSLLDGCCKANEIEMALKVYKNMEILKIKPSNVTYSILIKIYGKQRNLPKALGVLE 973
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+MK G P + +Y L+ +++ L+ E+L+ +M + + D+++Y T+I+ ++
Sbjct: 974 EMKKDGIRPGLIVYTCLLQTCIKSRQLKTAEQLFHDMRIQGIRGDQLTYQTMINGCLYSQ 1033
Query: 519 EFD 521
+FD
Sbjct: 1034 KFD 1036
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 109/524 (20%), Positives = 214/524 (40%), Gaps = 67/524 (12%)
Query: 118 STLKLLIRYLVQSKKWDSIVS----LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
STLK+ ++Y + + + + L + + N T ++++ S ++A F+ A
Sbjct: 289 STLKIFVKYYSRLNQTQTALQYFHQLQQTSQAQNDPTYYQTVNQMLDSLLKAELFEEAEQ 348
Query: 174 LL-QVFITDGE----IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
+ +VF + + ++ F+ + GY + + V MK GI D Y I+
Sbjct: 349 IYNKVFTLSKDQPNCMDMMTFSCMIKGYCRAQRLPQALNVLSIMKERGIKPDEVLYNSII 408
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
+ K K L+ E + TP +T + L D +SG +A + MKEK
Sbjct: 409 DGCSKNNQIAKAFLLYDEMLGEGV--TP-TTITFNSLIDCCVRSGNQDQAWRVLEQMKEK 465
Query: 289 GILEDPSIYASLICSFASITEVKLAEE---LFKEAEEKGMLRDPEVCLKLVL-------- 337
+ D Y++L S + + E+ L+ + + E+ ++L
Sbjct: 466 QVKPDNYTYSTLFKGIKSENQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINCKQ 525
Query: 338 -------------------MYIEEGLVEKTL---DVVESMKNAKLKIS---------DCI 366
+ +L D +S KNA ++ D I
Sbjct: 526 LDRAVELFKQLKPQSQPQIQVSNTDDADNSLSLEDSPDSAKNAPAVVNSSNHHFMRPDEI 585
Query: 367 S-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
S I+ G ++ + A +++ + Q P VTY S+I+A R + A ++ EM
Sbjct: 586 SFNTIIKGCAQEKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNSAWQLLSEM 645
Query: 426 QQKGFDKCVVAYSSMV--------AMYGKTG--RIRDAMWLVAKMKAK--GCEPNVWIYN 473
QQ YS+++ + G + + A L+ +MK G +P+ +YN
Sbjct: 646 QQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEILYN 705
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
L+D R ++ + +++EM+ + P V+Y +I AY A + D + + + N
Sbjct: 706 CLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKDN 765
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ + G ++ K +QIE +++ + MK +G +L+ ++
Sbjct: 766 CLIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIF 809
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/533 (19%), Positives = 216/533 (40%), Gaps = 43/533 (8%)
Query: 86 FLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSE-DFK 144
F H +P+ LA + P P ++ +L R L+ + L E
Sbjct: 11 FPHATFPNPKPHHLAAAAATRPES-PNVAPNPASARL--RRLIAREDLAGAARLVELSAS 67
Query: 145 IYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKL-HM- 201
PD + C++L+ + C R R A L + + + A+N+ + GY + H+
Sbjct: 68 RDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD 127
Query: 202 ---------------YYSTILVY-----EKMKSAGIVLDS----GC------YCQIMEAY 231
Y T L+ ++ A +LD GC Y ++EA
Sbjct: 128 AARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAM 187
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K E+ A+ E +++ TP + Y ++ + + + GR +A + G
Sbjct: 188 CKNSGFEQAMAVLDEMRAKG--CTP-NIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQ 244
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
D Y +L+ + EELF E EK + + L+ + G+VE+ + V
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 304
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++ M + + + ++N K+ A K + S GC P ++Y +++ CR
Sbjct: 305 LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCR 364
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
++ A+++ EM + V +++ + + + G I A+ L+ +M+ GC V
Sbjct: 365 AERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVT 424
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
YN+L++ ++ +L++ M P+ ++YTT+++ A D + E
Sbjct: 425 YNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEML 481
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ ++V F + ++E ++L++ M G + Y++ + +
Sbjct: 482 HRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGI 534
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 138/327 (42%), Gaps = 38/327 (11%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+T + I+ +S+ K GR +A KF +M G D Y +++ A+EL
Sbjct: 316 NTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELL 375
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
KE + + + ++GL+E+ + ++E M+ + A+VNGF +
Sbjct: 376 KEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQ 435
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
+A++++ S C P +TY +++ C A ++ EM + VV +
Sbjct: 436 GHIDSALELFR---SMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTF 492
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+ +V + + G + +A+ LV +M GC PN+ YN+L D + + +L +
Sbjct: 493 NVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVS 552
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ V+PD ++++++I G+ SK ++EE
Sbjct: 553 KGVSPDVITFSSII-----------------------------------GILSKEDRVEE 577
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNAL 584
+++ + G + +Y+ + L
Sbjct: 578 AIQMFHLAQDIGMRPKALVYNKILLGL 604
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 111/270 (41%), Gaps = 5/270 (1%)
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
A G D +C KL+ G V+ + + + + +V G+ R G
Sbjct: 66 ASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYC-RYG 124
Query: 380 YWAAVKVYEQLI-SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ A + +LI S P TY +I C + A + +M ++G VV Y+
Sbjct: 125 HLDAAR---RLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYT 181
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
++ K AM ++ +M+AKGC PN+ YN +++ R + L +
Sbjct: 182 VLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSY 241
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
PD VSYTT++ ++ +D + + E + + +++ F + +E
Sbjct: 242 GCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA 301
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+++LQ M + L + +N++ G
Sbjct: 302 IQVLQQMTEHECATNTTLCNIVINSICKQG 331
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/494 (18%), Positives = 204/494 (41%), Gaps = 46/494 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEF--RPEKSTLKLLIRYLVQSKKWDS 135
P+ ++ ++GM ++ + + A D N +L + +P+ + L++ L SK+WD
Sbjct: 210 PNIVTYNVIINGMCREGRVDD-ARDLLN---RLFSYGCQPDTVSYTTLLKGLCASKRWDD 265
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGG 195
+ L + N +P+ T L+ R + A +LQ +T+ E A N+ +
Sbjct: 266 VEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQ-MTEHECAT---NTTLCN 321
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+V + G V D+ + M +Y C D+
Sbjct: 322 -----------IVINSICKQGRVDDAFKFLNNMGSY--------------GCNP---DTI 353
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
++T + K LC ++ R +A + ++M + + + IC ++ A
Sbjct: 354 SYTT-VLKGLC----RAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIM 408
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L ++ +E G LV + +G ++ L++ SM I+ ++ G
Sbjct: 409 LIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTIT---YTTLLTGLC 465
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
AA ++ +++ + C P VT+ ++N +C+ +A ++ +M + G ++
Sbjct: 466 NAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLI 525
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+++ K DA+ L+ + +KG P+V ++S++ + + + + +++
Sbjct: 526 TYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLA 585
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + P + Y ++ + E D + F NG + + + I++ ++ +
Sbjct: 586 QDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLL 645
Query: 556 EELVKLLQDMKSEG 569
+E LL + S G
Sbjct: 646 KEAQDLLSMLCSRG 659
>gi|410110127|gb|AFV61143.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
origanoides]
Length = 408
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 168/355 (47%), Gaps = 7/355 (1%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 1 GLFDEMRQRALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLI 57
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A +F + G D ++ ++ + L + ++ MK A +
Sbjct: 58 ELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVM 117
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++ + + + + A+ V+ ++ C+ T +I+ Y ++ + +A+K+
Sbjct: 118 PNTTSYSTLLXMYVENKKFLEALSVFSEMREIKCLLDLXTCNIMIDVYGQLGMAKEADKL 177
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M++ G + VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G+
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ +
Sbjct: 238 TLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQIL 297
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M+ + + + +LL ++K + D +A++ L AG +A ++
Sbjct: 298 FQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYV 348
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 167/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F+ + Y + +
Sbjct: 39 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKRSGFTPDLVAYNAMIN 93
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +MK G++ + + Y++L+ + + A +F E E L
Sbjct: 94 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLXMYVENKKFLEALSVFSEMREIKCLL 153
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 154 DLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 213
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 214 RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV 273
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + ++ +++ + RA + ++L E++R PD +
Sbjct: 274 GKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKR----PDNIPR 329
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ + SK + +V++ M+
Sbjct: 330 DTAIHILAGAGRIEEATYVFRQAVDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRG 389
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 390 LGYFPDSNVIAVVLNA 405
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 154/333 (46%), Gaps = 11/333 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +MK+AG++ ++ Y ++ Y + + ++F
Sbjct: 85 LVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLXMYVENKKFLEALSVFS 144
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 145 EMREIKCLLDLXTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 199
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M++ ++ +
Sbjct: 200 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPN 259
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G Q+ + ++I AY R L + A+++
Sbjct: 260 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLH 319
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ + + + + GRI +A ++ + G ++ ++ ++ + + K
Sbjct: 320 ELKRPD----NIPRDTAIHILAGAGRIEEATYVFRQAVDAGEVKDITVFERMIHLLSKYK 375
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
V +++ +M PD V++AY +
Sbjct: 376 KYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGK 408
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 142/343 (41%), Gaps = 24/343 (6%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ +I ++K + SL + K V+P+ + S L+ V +KF A
Sbjct: 81 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLXMYVENKKFLEA- 139
Query: 173 TLLQVFITDGEIA----LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
L VF EI L N + Y +L M ++ M+ GI + Y ++
Sbjct: 140 --LSVFSEMREIKCLLDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLL 197
Query: 229 EAYYKIGDSE---KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
Y GD+E + LF + + ++ + Y + GK+ +A ++M
Sbjct: 198 RVY---GDAELFGEAIHLFRLMQRKNIEQNVVT---YNSMMMIYGKTLEHEKANNLIQEM 251
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+ +GI + Y+++I + + ++ A LF++ G+ D + +++ Y GLV
Sbjct: 252 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLV 311
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
++ +K I + I+ G + A V+ Q + G + + +
Sbjct: 312 AHAKRLLHELKRPD-NIPRDTAIHILAGAGRIE---EATYVFRQAVDAGEVKDITVFERM 367
Query: 406 INAYCRIALYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGK 446
I+ + YS +VF +M+ G+ D V+A ++ YGK
Sbjct: 368 IHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAV--VLNAYGK 408
>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 173/361 (47%), Gaps = 8/361 (2%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + R L ++ Y L S GK G AL + + M++ + D +Y++LI
Sbjct: 44 GLFDEMRQRALAPDRYT---YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLI 100
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A +F + G+ D ++ +Y + L + +++ M A +
Sbjct: 101 ELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVL 160
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ +++ + + + A+ V+ ++ C T +I+ Y ++ + +A+++
Sbjct: 161 PNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRL 220
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F +++ + VV+Y++++ +YG+ +A+ L M+ K E NV YN+++ ++G+
Sbjct: 221 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 280
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L +EM+ R + P+ ++Y+T+IS + +A + D + + R +G ID+ +
Sbjct: 281 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVL 340
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL-QQNF 600
M+ + ++ + +LL ++K D +A+ L AG +A W+ +Q F
Sbjct: 341 YQTMIVAYERVGLMGHAKRLLHELKLP----DNIPRETAITILAKAGRTEEATWVFRQAF 396
Query: 601 E 601
E
Sbjct: 397 E 397
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 106/494 (21%), Positives = 220/494 (44%), Gaps = 31/494 (6%)
Query: 80 AKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPE---KSTLKLLIRYLVQSKKWDSI 136
AK+FD HG+ + + + LA D Y + + F E S L L Q + D +
Sbjct: 36 AKQFD-IAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWL-----QKMEQDRV 89
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
S D +Y+ L + SR + C ++ I + L + IT L+A+NS + Y
Sbjct: 90 ---SGDLVLYSNLIE---LSRRL--CDYSKAISIFSRLKRSGITPD---LVAYNSMINVY 138
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK--LDS 254
K ++ L+ ++M AG++ ++ Y ++ Y + + ++F E K LD
Sbjct: 139 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDL 198
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
T + I+ D G+ EA + F +++ I + Y +++ + A
Sbjct: 199 TTCN-----IMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAI 253
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
LF+ + K + ++ ++ +Y + EK ++V+ M++ ++ + I++ +
Sbjct: 254 HLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIW 313
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A ++++L S G QV Y ++I AY R+ L A+++ E++
Sbjct: 314 GKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPD----N 369
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ + + + K GR +A W+ + G ++ ++ +++++ R + V +++++
Sbjct: 370 IPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEK 429
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M PD V++AY + REF+ Y E + G V + M+ ++S
Sbjct: 430 MRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKD 489
Query: 555 IEELVKLLQDMKSE 568
E + L Q ++S+
Sbjct: 490 FEMVESLFQRLESD 503
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 87/181 (48%), Gaps = 8/181 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P Y ++ R + A +F EM+Q+ YS+++ +GK G A+
Sbjct: 21 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 80
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ KM+ ++ +Y++L+++ R + + ++ ++R +TPD V+Y ++I+ Y +
Sbjct: 81 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 140
Query: 517 A---REFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
A RE + +K NE GV+ ++ ++ V+ + + E + + +MK L
Sbjct: 141 AKLFREARLLIKEMNE----AGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 196
Query: 573 D 573
D
Sbjct: 197 D 197
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 105/259 (40%), Gaps = 44/259 (16%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+++K++S+G+ +D Y ++ AY ++G L E K D+ P T +
Sbjct: 325 LFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLP--DNIPRETAI-----T 377
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L K+GR EA FR E G ++D S++ +I
Sbjct: 378 ILAKAGRTEEATWVFRQAFESGEVKDISVFGCMIN------------------------- 412
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+Y ++V E M+ A + ++N + K+R + A VY
Sbjct: 413 ----------LYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVY 462
Query: 388 EQLISQGCI-PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
++ +GC+ P +V + +++ Y + E +F ++ + + A+Y +
Sbjct: 463 REMQEEGCVFPDEVHF-QMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYER 521
Query: 447 TGRIRDAMWLVAKMKAKGC 465
++ DA ++ +M+ +G
Sbjct: 522 ADKLNDASRVMNRMRERGI 540
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 62/130 (47%)
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+V+ YN ++ RAK L+ EM +R + PD+ +Y+T+I+++ + FD + +
Sbjct: 21 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 80
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ + D + ++ + +L + + + +K G D Y+S +N
Sbjct: 81 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 140
Query: 587 AGLQMQAQWL 596
A L +A+ L
Sbjct: 141 AKLFREARLL 150
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 154/343 (44%), Gaps = 3/343 (0%)
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
TP MY + D + K G A + M G+ + Y +++ S K AE
Sbjct: 283 TP-DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNG 373
EL E +K D LV + + GLV++ ++++E M + + D I+ ++NG
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC-MPDVITYTTVING 400
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
F K AV + + + S GC P V+Y ++ C + AE++ +M Q+G
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPN 460
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V +++++ K G + A+ L+ +M GC P++ Y++++D G+A + +L
Sbjct: 461 PVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLN 520
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
M + ++P+ + Y+++ A +R + ++ ++ + D + ++ K
Sbjct: 521 VMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRW 580
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + + M S G +E Y + L GL +AQ L
Sbjct: 581 ETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQEL 623
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 156/339 (46%), Gaps = 11/339 (3%)
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
++D P + + L L ++G + M E G D +YA++I +
Sbjct: 244 RVDCAP-NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV-----EKTLDVVESMKNAKLKISDC 365
++A E+ G L+ VC VL +GL ++ +++ M + D
Sbjct: 303 EVANEILNRMPSYG-LKPNVVCYNTVL----KGLCSAERWKEAEELLSEMFQKDCPLDDV 357
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
+V+ F + +++ EQ++S GC+P +TY ++IN +C+ L +A + M
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
G V+Y+ ++ GR DA L+++M +GC PN +N+L++ + +
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
Q +L K+M +PD +SY+TVI +A + + ++ N G + I +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
S+ ++ +++++ ++K + D LY++ +++L
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL 576
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 179/417 (42%), Gaps = 3/417 (0%)
Query: 162 CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
C+ R + + ++ D ++ FN+ +G + ++ V +M G D
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y I++ K G E + S L + Y + L + R EA +
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKP---NVVCYNTVLKGLCSAERWKEAEEL 343
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+M +K D + L+ F V EL ++ G + D ++ + +
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCK 403
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
EGL+++ + +++SM + K + ++ G + A ++ Q+I QGC P VT
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ ++IN C+ L +A ++ +M G +++YS+++ GK G+ +A+ L+ M
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
KG PN IY+S+ R + +V +++ ++ + D V Y VIS+ + E D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ F+ NG + + + +++ + +E +LL ++ S G + H
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRH 640
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 160/352 (45%), Gaps = 9/352 (2%)
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
P + + + + L GR +AL+ +M KG P +Y ++ + + +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYI-EEGLVEKTLDVVESMKNAKLKISDCIS-CAIVN 372
+ + KG D C LVL I E+G V++ + ++ + + +D +S A++
Sbjct: 167 RVLEAMHAKGCTLDTGNC-NLVLNAICEQGCVDEAVGLLRKLAFFGCE-ADIVSYNAVLK 224
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G + + ++ ++++ C P VT+ ++I CR L+ + +V +M + G
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+ Y++++ K G + A ++ +M + G +PNV YN+++ A+ ++ E+L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
EM ++ D V++ ++ + + D ++ + +G + D ++ F K
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL-----QMQAQWLQQN 599
I+E V LL+ M S G K + Y + L AG ++ +Q +QQ
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/392 (18%), Positives = 163/392 (41%), Gaps = 13/392 (3%)
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL-----FLECKSRKLDSTP 256
+ +++ V E M + G LD+G ++ A + G ++ L F C++ +
Sbjct: 162 FRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVS--- 218
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y + L + R + + +M + + +LI + E+
Sbjct: 219 -----YNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ E G D + ++ +EG +E +++ M + LK + ++ G
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCS 333
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A ++ ++ + C VT+ +++ +C+ L + ++ +M G V+
Sbjct: 334 AERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVIT 393
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++++ + K G I +A+ L+ M + GC+PN Y ++ A E+L +M
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
++ P+ V++ T+I+ + + ++ + +NG D ++ K + E
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E ++LL M ++G + +Y S AL G
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREG 545
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/386 (18%), Positives = 156/386 (40%), Gaps = 6/386 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T LI YL ++ ++ + + + PD + ++ + ++AN +
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L + G + ++ +N+ + G + + +M LD + +++ + +
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G ++V L + S + Y + + K G EA+ + M G +
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVIT---YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y ++ S AEEL + ++G +P L+ ++GLVE+ +++++
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Query: 354 SMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
M D IS +++G K A+++ ++++G P + Y+SI A R
Sbjct: 486 QMLVNGCS-PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+K ++F ++ V Y+++++ K A+ A M + GC PN Y
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERR 498
L+ ++ ++L E+ R
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSR 630
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 8/162 (4%)
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VVAY++MVA Y + G++ A L A + PN + + ++ + ++
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVP---PNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
EM + P Y ++ A R+ F V+ G +D +++ +
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
++E V LL+ + G + D Y++ + GL M +W
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLK-----GLCMAKRW 232
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 154/343 (44%), Gaps = 3/343 (0%)
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
TP MY + D + K G A + M G+ + Y +++ S K AE
Sbjct: 283 TP-DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNG 373
EL E +K D LV + + GLV++ ++++E M + + D I+ ++NG
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC-MPDVITYTTVING 400
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
F K AV + + + S GC P V+Y ++ C + AE++ +M Q+G
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPN 460
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V +++++ K G + A+ L+ +M GC P++ Y++++D G+A + +L
Sbjct: 461 PVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLN 520
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
M + ++P+ + Y+++ A +R + ++ ++ + D + ++ K
Sbjct: 521 VMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRW 580
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + + M S G +E Y + L GL +AQ L
Sbjct: 581 ETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQEL 623
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 156/339 (46%), Gaps = 11/339 (3%)
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
++D P + + L L ++G + M E G D +YA++I +
Sbjct: 244 RVDCAP-NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV-----EKTLDVVESMKNAKLKISDC 365
++A E+ G L+ VC VL +GL ++ +++ M + D
Sbjct: 303 EVANEILNRMPSYG-LKPNVVCYNTVL----KGLCSAERWKEAEELLSEMFQKDCPLDDV 357
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
+V+ F + +++ EQ++S GC+P +TY ++IN +C+ L +A + M
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
G V+Y+ ++ GR DA L+++M +GC PN +N+L++ + +
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
Q +L K+M +PD +SY+TVI +A + + ++ N G + I +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
S+ ++ +++++ ++K + D LY++ +++L
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL 576
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 179/417 (42%), Gaps = 3/417 (0%)
Query: 162 CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS 221
C+ R + + ++ D ++ FN+ +G + ++ V +M G D
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y I++ K G E + S L + Y + L + R EA +
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKP---NVVCYNTVLKGLCSAERWKEAEEL 343
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+M +K D + L+ F V EL ++ G + D ++ + +
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCK 403
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
EGL+++ + +++SM + K + ++ G + A ++ Q+I QGC P VT
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ ++IN C+ L +A ++ +M G +++YS+++ GK G+ +A+ L+ M
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
KG PN IY+S+ R + +V +++ ++ + D V Y VIS+ + E D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ F+ NG + + + +++ + +E +LL ++ S G + H
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRH 640
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 160/352 (45%), Gaps = 9/352 (2%)
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
P + + + + L GR +AL+ +M KG P +Y ++ + + +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYI-EEGLVEKTLDVVESMKNAKLKISDCIS-CAIVN 372
+ + KG D C LVL I E+G V++ + ++ + + +D +S A++
Sbjct: 167 RVLEAMHAKGCTLDTGNC-NLVLNAICEQGCVDEAVGLLRKLAFFGCE-ADIVSYNAVLK 224
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G + + ++ ++++ C P VT+ ++I CR L+ + +V +M + G
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+ Y++++ K G + A ++ +M + G +PNV YN+++ A+ ++ E+L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
EM ++ D V++ ++ + + D ++ + +G + D ++ F K
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL-----QMQAQWLQQN 599
I+E V LL+ M S G K + Y + L AG ++ +Q +QQ
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/392 (18%), Positives = 163/392 (41%), Gaps = 13/392 (3%)
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL-----FLECKSRKLDSTP 256
+ +++ V E M + G LD+G ++ A + G ++ L F C++ +
Sbjct: 162 FRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVS--- 218
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y + L + R + + +M + + +LI + E+
Sbjct: 219 -----YNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ E G D + ++ +EG +E +++ M + LK + ++ G
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCS 333
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A ++ ++ + C VT+ +++ +C+ L + ++ +M G V+
Sbjct: 334 AERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVIT 393
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++++ + K G I +A+ L+ M + GC+PN Y ++ A E+L +M
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
++ P+ V++ T+I+ + + ++ + +NG D ++ K + E
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E ++LL M ++G + +Y S AL G
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREG 545
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/386 (18%), Positives = 156/386 (40%), Gaps = 6/386 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T LI YL ++ ++ + + + PD + ++ + ++AN +
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L + G + ++ +N+ + G + + +M LD + +++ + +
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G ++V L + S + Y + + K G EA+ + M G +
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVIT---YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y ++ S AEEL + ++G +P L+ ++GLVE+ +++++
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Query: 354 SMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
M D IS +++G K A+++ ++++G P + Y+SI A R
Sbjct: 486 QMLVNGCS-PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+K ++F ++ V Y+++++ K A+ A M + GC PN Y
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERR 498
L+ ++ ++L E+ R
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSR 630
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 8/162 (4%)
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
VVAY++MVA Y + G++ A L A + PN + + ++ + ++
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVP---PNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
EM + P Y ++ A R+ F V+ G +D +++ +
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
++E V LL+ + G + D Y++ + GL M +W
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLK-----GLCMAKRW 232
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/535 (20%), Positives = 226/535 (42%), Gaps = 51/535 (9%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
+D + Q +VP ++S LH M + ++ +D YNE K + E +T L+
Sbjct: 197 KDLNFQASVP---TYNSLLHNM----RHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCE 249
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG------ 182
QSK D+I L + K+ V P + + +++ + +A + + + +G
Sbjct: 250 QSKLEDAISFLHDSNKV--VGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSF 307
Query: 183 ------------------------------EIALLAFNSAMGGYNKLHMYYSTILVYEKM 212
E ++ +N+ G+ L + V +KM
Sbjct: 308 SYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367
Query: 213 KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKS 272
G+ D Y ++ + ++G+ E+ L E SR + Y +L L K
Sbjct: 368 LLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGF---KLNVIFYNMLLSCLCKV 424
Query: 273 GRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
GR EAL F +M+ + D +Y+ LI V+ A +L+++ K
Sbjct: 425 GRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQ 484
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
++L + G + + + ++ L + +++G+ + G A+++Y ++I
Sbjct: 485 RAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIE 544
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
+G P VT+ ++IN +CR +A K+ ++ KG VV Y++++ Y + G +++
Sbjct: 545 RGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQE 604
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
+ +M+A P Y L+ R + + +L + M + + PD V+Y T+I
Sbjct: 605 MFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQ 664
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG---VFSKLSQIEELVKLLQD 564
+ + +E ++ YN ++ + +++ +F L ++ +V ++D
Sbjct: 665 CFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIED 719
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/504 (19%), Positives = 194/504 (38%), Gaps = 39/504 (7%)
Query: 121 KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
+L+ L + D + ++D + + V PD T + L + A ++Q +
Sbjct: 310 NILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLL 369
Query: 181 DG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
G L+ + + + G+ ++ + + ++ S G L+ Y ++ K+G E+
Sbjct: 370 QGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEE 429
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG---RAF-------------------- 276
LF E ++ +L+ +Y IL L K G RA+
Sbjct: 430 ALTLFDEMETLRLEPDFI---VYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRA 486
Query: 277 ------------EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
EA +F ++ED +Y +I + + + A +L+ + E+G
Sbjct: 487 VLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERG 546
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ L+ + G + + ++E ++ L S ++N + +
Sbjct: 547 ITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMF 606
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
++ + +P VTY +I CR ++ ++ M KG V Y++++ +
Sbjct: 607 HFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCF 666
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K I A+ L M C+P Y L++ +L+ V+++ +E R +T K
Sbjct: 667 CKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKK 726
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+Y T+I A+ + + ++N+ G VI ++ K I E
Sbjct: 727 XTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVM 786
Query: 565 MKSEGTKLDERLYHSAMNALRDAG 588
M SEG D + + +NA G
Sbjct: 787 MLSEGVTPDPEICKTVLNAFHQQG 810
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 110/250 (44%), Gaps = 3/250 (1%)
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI-PGQVTYASIINA 408
DV +K + S+C + +++G ++ A+ S + P V+ +I++
Sbjct: 223 DVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHD--SNKVVGPSIVSINTIMSK 280
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+C++ L A F M + G +Y+ ++ G + +A+ M+ G EP+
Sbjct: 281 FCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPD 340
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
V YN+L + K+ ++M + + PD V+YTT+I + + + +K
Sbjct: 341 VVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQ 400
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E G ++ +++ K+ +IEE + L +M++ + D +Y ++ L G
Sbjct: 401 ETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEG 460
Query: 589 LQMQAQWLQQ 598
+A L +
Sbjct: 461 FVQRAYQLYE 470
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/526 (21%), Positives = 218/526 (41%), Gaps = 46/526 (8%)
Query: 114 RPEKSTLKL--LIRYLVQSKKWDSIVSLSE---------DFKIYNVL------------- 149
RP S ++ L+ + + KK+D ++SL E D YN+L
Sbjct: 75 RPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLA 134
Query: 150 -------------PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
PD T S L+ +++ A L+ + G + + FN+ + G
Sbjct: 135 LAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHG 194
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ + + ++M G D Y ++ K GD + +L + + K+++
Sbjct: 195 LFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEA- 253
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+Y + D L K +A F M+ KGI D Y SLI + A
Sbjct: 254 --DVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASR 311
Query: 316 LFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L E+ + +P V L+ +++EG + + + + M + +++NG
Sbjct: 312 LLSNMIERKI--NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
F A ++E +IS+ C P VTY ++I +C+ + ++F EM Q+G
Sbjct: 370 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V Y++++ + G A + KM + G P++ Y+ L+D + L + +++
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
+++ K+ PD +Y +I +A + + + + G + I M+ F +
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNA-LRDAGLQMQAQWLQQ 598
EE L ++MK +GT D Y++ + A LRD A+ +++
Sbjct: 550 LKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKE 595
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 185/439 (42%), Gaps = 6/439 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
++P+ T LI L K V+L + PD T +V + +A
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240
Query: 173 TLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+LL+ + G+I ++ +N+ + G K ++ KM++ GI D Y ++
Sbjct: 241 SLLKK-MEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
G + L RK++ + + L D+ K G+ EA K + +M ++ I
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVT---FSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
D Y+SLI F + A+ +F+ K + L+ + + VE+ ++
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ M L + ++ G + A K++++++S G P +TY+ +++ C
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ KA VF +Q+ + + Y+ M+ K G++ D L + KG +PNV
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
IY +++ R + + L++EM+ PD Y T+I A R + + E
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 596
Query: 531 RMNGGVIDRAIAGIMVGVF 549
R G V D + +++ +
Sbjct: 597 RSCGFVGDASTISMVINML 615
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 6/202 (2%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
+Y +IN +CR + A V +M + G++ +V SS++ Y + RI DA+ LV +M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 176
Query: 461 KAKGCEPNVWIYNSLMD---MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
G +P+ +N+L+ +H +A + L +M +R PD V+Y V++ +
Sbjct: 177 VEMGYKPDTVTFNTLIHGLFLHNKAS---EAVALVDQMVQRGCQPDLVTYGAVVNGLCKR 233
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ D+ + + D I ++ K I++ L M+++G + D Y
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTY 293
Query: 578 HSAMNALRDAGLQMQAQWLQQN 599
+S ++ L + G A L N
Sbjct: 294 NSLISCLCNYGRWSDASRLLSN 315
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 115/278 (41%), Gaps = 19/278 (6%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR------PEKSTLKLLIRYLVQSK 131
PD + S ++G +D +EAK + E P T LI+ ++K
Sbjct: 358 PDIFTYSSLINGFC--------MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFN 190
+ + + L + ++ + T + L+ +A +A + + ++DG ++ ++
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ G K ++V+E ++ + + D Y ++E K G E LF S
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC---SL 526
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
L + +Y + + G EA FR+MKE G L D Y +LI + +
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDK 586
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
+ EL KE G + D + +V+ + +G +EK+
Sbjct: 587 AASAELIKEMRSCGFVGDAST-ISMVINMLHDGRLEKS 623
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 93/205 (45%), Gaps = 6/205 (2%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+ ++ +++ +P V + +++A ++ + + MQ + +Y+ ++
Sbjct: 64 AIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ + ++ A+ ++ KM G EP++ +SL++ + +K + L +M P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 183
Query: 503 DKVSYTTVISA---YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
D V++ T+I +N+A E V ++ G D G +V K I+ +
Sbjct: 184 DTVTFNTLIHGLFLHNKASE---AVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240
Query: 560 KLLQDMKSEGTKLDERLYHSAMNAL 584
LL+ M+ + D +Y++ ++ L
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGL 265
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 118/571 (20%), Positives = 227/571 (39%), Gaps = 73/571 (12%)
Query: 87 LHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIY 146
+ LKD +E A ++ EAK + + + ++I+ ++ + L +D +
Sbjct: 251 MRANLKDNNEEE-AKKFFLEAKS-RGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDK 308
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYST 205
+P T + ++ +CV+ A L ++ G ++ ++ + + GY K S
Sbjct: 309 GWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSA 368
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF-------- 257
+ ++KM G + Y ++E K G+ K L+ + K++ + T F
Sbjct: 369 LEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRG 428
Query: 258 -----------------------STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
+ Y L L K G+ EA ++ M +KG+
Sbjct: 429 FLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTK 488
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVV 352
Y S+I + +A +F + + G+ P V +LM Y + G E V
Sbjct: 489 VSYNSMILGHCRQGNLDMAASVFSDMLDCGL--KPNVITYSILMDGYFKNGDTEYAFYVF 546
Query: 353 ESMKNAKLKISD----------------------------------CIS-CAIVNGFSKR 377
+ M + + SD C++ +I++GF K
Sbjct: 547 DRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKE 606
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
+A+ Y ++ G P +TY ++IN +C+ A K+ EM+ KG + + AY
Sbjct: 607 GSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAY 666
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+++ + K I A WL +++ G PN IYNSL+ + N+ L K M
Sbjct: 667 GALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLG 726
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
++ D +YTT+I + + + Y+E G + D I +++ Q+E
Sbjct: 727 EGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLEN 786
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
K+L +M+ + + +Y++ + AG
Sbjct: 787 AQKILAEMERDSITPNVPIYNALIAGHFKAG 817
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 189/443 (42%), Gaps = 20/443 (4%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ-------SKKWDSIVSLSEDFKIYNVLPDA 152
AYD Y + K P + LIR ++ SK +D V+ I N+
Sbjct: 403 AYDLYTQMKN-KNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACD----IANIF--- 454
Query: 153 HTCSRLVASCVRARKFKIANTLLQVFITDGEIAL-LAFNSAMGGYNKLHMYYSTILVYEK 211
T + L++ + K A TL Q + G +++NS + G+ + V+
Sbjct: 455 -TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSD 513
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
M G+ + Y +M+ Y+K GD+E +F + + F+ Y I + L K
Sbjct: 514 MLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFT---YNIKINGLCK 570
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
GR EA + EKG + Y S++ F V A ++E E G+ +
Sbjct: 571 VGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVIT 630
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L+ + + + L + M+N L++ A+++GF K++ A ++ +L+
Sbjct: 631 YTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELL 690
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
G P V Y S+I+ Y + A + M +G + Y++++ K GR+
Sbjct: 691 DGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLV 750
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
A+ L ++M AKG P++ IY L++ L +K+ EMER +TP+ Y +I
Sbjct: 751 LALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALI 810
Query: 512 SAYNRAREFDMCVKFYNEFRMNG 534
+ + +A + +NE G
Sbjct: 811 AGHFKAGNLQEAFRLHNEMLDKG 833
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 127/585 (21%), Positives = 221/585 (37%), Gaps = 122/585 (20%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
L+ ++ +K++D D +IYN L +++ ++A K A +
Sbjct: 157 LVDHFIGSTKRFD----FDSDIRIYNYLLNSY---------IKANKLNDAIGCFNRLVES 203
Query: 182 GEIALLAF-NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
+ + F N + K M Y VYEKM G+ D +M A K + E+
Sbjct: 204 DIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEA 263
Query: 241 AALFLECKSR--KLDSTPFSTHMYKILCDSLG---------------------------- 270
FLE KSR KLD+ +S + + C +L
Sbjct: 264 KKFFLEAKSRGVKLDAAAYSI-VIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIG 322
Query: 271 ---KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
K G EAL+ +M G+ + + +L+ + ++ A E F + E G
Sbjct: 323 ACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSP 382
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK---------------LKI---------- 362
+ L+ + G + K D+ MKN LK+
Sbjct: 383 NRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLF 442
Query: 363 SDCISCAIVNGFS---------KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+ ++C I N F+ K A ++++++ +G P +V+Y S+I +CR
Sbjct: 443 DEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQG 502
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY----------------------------- 444
A VF +M G V+ YS ++ Y
Sbjct: 503 NLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYN 562
Query: 445 ------GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
K GR +A ++ K KG P YNS+MD + ++ ++EM
Sbjct: 563 IKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCES 622
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
V+P+ ++YTT+I+ + + D+ +K NE R G +D A G ++ F K IE
Sbjct: 623 GVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETA 682
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRD-----AGLQMQAQWLQQ 598
L ++ G + +Y+S ++ R+ A L +Q + L +
Sbjct: 683 SWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGE 727
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/480 (19%), Positives = 190/480 (39%), Gaps = 15/480 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + T +LI + ++ L K N+ P + L+ ++ + A+ L
Sbjct: 382 PNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKL 441
Query: 175 LQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
+ + +NS + K +++KM G+ Y ++ + +
Sbjct: 442 FDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQ 501
Query: 235 GDSEKVAALF---LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
G+ + A++F L+C + + Y IL D K+G A F M ++ I+
Sbjct: 502 GNLDMAASVFSDMLDCGLKP------NVITYSILMDGYFKNGDTEYAFYVFDRMVDENIV 555
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL---KLVLMYIEEGLVEKT 348
Y I + A+++ K+ EKG + VCL ++ +I+EG V
Sbjct: 556 PSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFV---PVCLTYNSIMDGFIKEGSVSSA 612
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
L M + + + ++NGF K A+K+ ++ ++G Y ++I+
Sbjct: 613 LTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDG 672
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+C+ A +F E+ G V Y+S+++ Y + A+ L +M +G +
Sbjct: 673 FCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCD 732
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ Y +L+D + L L+ EM + + PD + YT +I+ + + K
Sbjct: 733 LQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILA 792
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E + + I ++ K ++E +L +M +G ++ Y +N G
Sbjct: 793 EMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 5/203 (2%)
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
E+ + A+ + + G+ K + ++ ++ G+ +S Y ++ Y + + E AA
Sbjct: 660 ELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNME--AA 717
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L L+ K + Y L D L K GR AL + +M KGI+ D IY LI
Sbjct: 718 LNLQ-KRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLIN 776
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
+++ A+++ E E + + + L+ + + G +++ + M + L
Sbjct: 777 GLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTP 836
Query: 363 SDCISCAIVNGFSKRRGYWAAVK 385
+D ++NG K +G +A+K
Sbjct: 837 NDTTYDILING--KIKGGNSALK 857
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/507 (22%), Positives = 216/507 (42%), Gaps = 12/507 (2%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A D + +++ P + L+ V++K+W + SL F+ V P+ T + L+
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
+ ++F+ A L +G + + ++++ + K + ++++M G+
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA 216
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL-DSTPF-STHMYKILCDSLGKSGRAF 276
D CY +++ + K D + L+ R L DS+ + + + I+ L K GR
Sbjct: 217 PDVTCYNILIDGFLKEKDHKTAMELW----DRLLEDSSVYPNVKTHNIMISGLSKCGRVD 272
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+ LK + MK+ +D Y+SLI V AE +F E +E+ D ++
Sbjct: 273 DCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTML 332
Query: 337 LMYIEEGLVEKTLDVVESM--KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
+ G ++++L++ M KN+ +S I ++ G + A ++ + ++G
Sbjct: 333 GGFCRCGKIKESLELWRIMEHKNSVNIVSYNI---LIKGLLENGKIDEATMIWRLMPAKG 389
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
+ TY I+ C +KA V E++ G V AY+S++ K R+ +A
Sbjct: 390 YAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEAS 449
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
LV +M G E N + N+L+ R L + +EM + P VSY +I
Sbjct: 450 NLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGL 509
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+A +F F E NG D I++ + +I+ ++L G + D
Sbjct: 510 CKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDV 569
Query: 575 RLYHSAMNALRDAGLQMQAQWLQQNFE 601
+++ ++ L G A + N E
Sbjct: 570 MMHNILIHGLCSVGKLDDAMTVMANME 596
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/490 (19%), Positives = 189/490 (38%), Gaps = 68/490 (13%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F+P+ + +I L ++ K D + L ++ V PD + L+ ++ + K A
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAM 239
Query: 173 TLLQVFITDGEI--ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
L + D + + N + G +K + ++E+MK D Y ++
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Query: 231 YYKIGDSEKVAALFLECKSRK--LDSTPFSTHM--------------------------- 261
G+ +K ++F E RK +D ++T +
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNI 359
Query: 262 --YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
Y IL L ++G+ EA +R M KG D + Y I V A + +E
Sbjct: 360 VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE 419
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
E G D ++ ++ +E+ ++V+ M ++++ + A++ G +
Sbjct: 420 VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A ++ GC P V+Y +I C+ + +A EM + G+ + YS
Sbjct: 480 LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539
Query: 440 M---------------------------------VAMYG--KTGRIRDAMWLVAKMKAKG 464
+ + ++G G++ DAM ++A M+ +
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
C N+ YN+LM+ + + + +W M + + PD +SY T++ R +
Sbjct: 600 CTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAM 659
Query: 525 KFYNEFRMNG 534
+F+++ R +G
Sbjct: 660 EFFDDARNHG 669
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 102/256 (39%), Gaps = 37/256 (14%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQ------------------------------------ 393
I+ S+ R ++ E + SQ
Sbjct: 49 ILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIF 108
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
GC P +Y +++NA+ + K E +F + G + Y+ ++ M K A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ M +G +P+V+ Y+++++ +A L +L+ EM R V PD Y +I
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRA-IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ + ++ ++ ++ + V IM+ SK ++++ +K+ + MK +
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288
Query: 573 DERLYHSAMNALRDAG 588
D Y S ++ L DAG
Sbjct: 289 DLYTYSSLIHGLCDAG 304
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 78/180 (43%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y IL L K+G+ EA F ++M E G D Y+ L+C ++ LA EL+ +
Sbjct: 502 YNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ G+ D + L+ G ++ + V+ +M++ + ++ GF K
Sbjct: 562 QSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSN 621
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A ++ + G P ++Y +I+ C S A + F + + G V ++ +V
Sbjct: 622 RATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 109/269 (40%), Gaps = 3/269 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V ++++S+G LD Y I++ K E+ + L E ++ ++H+ L
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVE---LNSHVCNALIG 472
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L + R EA F R+M + G Y LIC + A KE E G
Sbjct: 473 GLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D + L+ + ++ L++ + L+ + +++G A+ V
Sbjct: 533 DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + C VTY +++ + ++ ++A ++ M + G +++Y++++
Sbjct: 593 ANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMC 652
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ AM + G P V+ +N L+
Sbjct: 653 RGVSYAMEFFDDARNHGIFPTVYTWNILV 681
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/471 (20%), Positives = 195/471 (41%), Gaps = 4/471 (0%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T LI + +W V + ++ + ++LPD T + L+ S + K K A +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDV 346
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G+ + ++N + GY +++ M GI + +++AY
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 406
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G +K +F E + + + Y + +L + G+ +A++ F M ++G+ D
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPNVLT---YTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y LI F + + A+EL E GM D + ++ + G V ++ +
Sbjct: 464 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFD 523
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
N L + + +++G+ A++V++ ++S G P V Y +++N YC+I
Sbjct: 524 LTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIG 583
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ +F EM QKG + Y+ ++ + GR A +M G N Y+
Sbjct: 584 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYS 643
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
++ + + + L+KE+ V D ++ T+I+ + R + + +
Sbjct: 644 IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 703
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G V IM+ K +EE + M++ G + D RL + + L
Sbjct: 704 GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 754
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 153/335 (45%), Gaps = 2/335 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAEELFKE 319
Y IL SL G++ +A R M E G + P + Y ++I F +V A +LFKE
Sbjct: 185 YSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKE 244
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
++G+ D +V + ++K + M N + ++ ++ G+S
Sbjct: 245 MVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQ 304
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ AV+V++++ Q +P VT+ ++ + C+ +A VF M KG + V +Y+
Sbjct: 305 WKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 364
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
M+ Y G + D L M G P + +N L+ + L + ++ EM
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
V P+ ++YTTVI+A R + D ++ +N+ G D+ ++ F + +
Sbjct: 425 VKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAK 484
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+L+ ++ + G LD L+ S +N L G M AQ
Sbjct: 485 ELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQ 519
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 118/520 (22%), Positives = 216/520 (41%), Gaps = 79/520 (15%)
Query: 150 PDAHTCSRLVASCVRARKFK-------------------IANTLLQVFI----TDGEIAL 186
P +HT + L+ C RA + + IAN LL+ F TD + +
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168
Query: 187 LAFNSAMGGYNKLHMYYSTIL--------------VYEKMKSAGIVL--DSGCYCQIMEA 230
L + G YS +L + M G V D Y +++
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
++K GD K LF E R + P Y + +L K+ +A F R M KG+
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGI---PPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 285
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
L + Y +LI ++S + K A +FKE + +L D L+ + G +++ D
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARD 345
Query: 351 VVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
V ++M K + D S I +NG++ + +++ ++ G P T+ +I AY
Sbjct: 346 VFDTMA-MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 404
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ KA +F EM+ G V+ Y++++A + G++ DAM +M +G P+
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464
Query: 470 WIYNSLMD---MHG---RAKNL--------------------RQVEKLWKEMERRKV--- 500
+ Y+ L+ HG +AK L + KL + M+ + +
Sbjct: 465 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDL 524
Query: 501 ------TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
P V Y+ ++ Y + + ++ ++ G + + G +V + K+ +
Sbjct: 525 TVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGR 584
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
I+E + L ++M +G K LY+ ++ L +AG + A+
Sbjct: 585 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 160/395 (40%), Gaps = 40/395 (10%)
Query: 242 ALFLECKSRKLDSTPFS--THMYKILCDSLGKSGRAFEALKFFRDMKEKGILED------ 293
ALF SR S +H Y IL D ++ R AL FF + G+ D
Sbjct: 92 ALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANH 151
Query: 294 ----------------------------PSI--YASLICSFASITEVKLAEELFKEAEEK 323
P + Y+ L+ S + A++L + E
Sbjct: 152 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211
Query: 324 GMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
G + P+V ++ + +EG V K D+ + M + ++V+ K R
Sbjct: 212 GAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMD 271
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A Q++++G +P TY ++I Y + +A +VF EM+++ VV ++ ++
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLM 331
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
K G+I++A + M KG P+V+ YN +++ + L + L+ M +
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P ++ +I AY D + +NE R +G + ++ ++ ++++ ++
Sbjct: 392 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M +G D+ YH + G ++A+ L
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 179/403 (44%), Gaps = 26/403 (6%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
A+ A N + G K + + VY M + G + Y +++ + GD K LF
Sbjct: 157 AMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLF 216
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
E +K+ T +Y IL L R EA FR M+ G+L + Y +++ +
Sbjct: 217 DEMIEKKIFPT---VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
I VK A EL++E G+L P V + G++ L + M +A+ + D
Sbjct: 274 CKIAHVKKALELYQEMLGDGLL--PNV--------VTFGILIDGLCKTDEMVSARKFLID 323
Query: 365 CISCAIV----------NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
S +V +G+ K A+ ++ ++ +P TY+ +I C +
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+A+ + EM++KGF V Y++++ Y K G + A+ + ++M KG EPN+ +++
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L+D + +A + L+ EM + + PD V+YT +I + + + + E + G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLL---QDMKSEGTKLDE 574
+ ++ K +I + +KL + G+K +E
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNE 546
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 190/452 (42%), Gaps = 52/452 (11%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA----RKFKI 170
P +++ LV+ ++D++ + D P+ T L+ C R + F++
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215
Query: 171 ANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ +++ I + + G +++ S ++ M+++G++ + Y +M+
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAES---MFRTMRNSGMLPNLYTYNTMMDG 272
Query: 231 YYKIGDSEKVAALFLE--------------------CKS------RK--LDSTPFST--- 259
Y KI +K L+ E CK+ RK +D F
Sbjct: 273 YCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPN 332
Query: 260 -HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
+Y L D K+G EAL ++++ IL D Y+ LI + ++ A+ L +
Sbjct: 333 IFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQ 392
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E ++KG L + L+ Y +EG +EK ++V M ++ + +++G+ K
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG 452
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
AA+ +Y +++ +G +P V Y ++I+ + + +A ++ EMQ+ G V S
Sbjct: 453 KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLS 512
Query: 439 SMVAMYGKTGRIRDAMWL-------------VAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
++ K GRI DA+ L ++ C PN +Y +L+ +
Sbjct: 513 CLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRI 572
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+ K + +M + PD + +I + RA
Sbjct: 573 FKASKFFSDMRCSGLRPDVFTCIVIIQGHFRA 604
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 24/227 (10%)
Query: 329 PEVCLKLVLMYIEEGLVEKTL------DVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
P V L++ + E GLVE+ L DV+ +M+ + +++G K+ +
Sbjct: 126 PNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNM---------VLDGLVKKGRFDT 176
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
KVY ++++G P VTY ++I+ CR + KA ++F EM +K VV Y+ ++
Sbjct: 177 MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR 236
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
RI +A + M+ G PN++ YN++MD + + ++++ +L++EM + P
Sbjct: 237 GLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLP 296
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+ V++ +I + E KF +ID A G++ +F
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKF---------LIDMASFGVVPNIF 334
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 146/343 (42%), Gaps = 37/343 (10%)
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
K+D P + ++ D L K GR K + DM +G + Y +LI +
Sbjct: 151 KMDVLP-AMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDF 209
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A LF E EK + P V + +L+ GL ++ +IS+
Sbjct: 210 LKAFRLFDEMIEKKIF--PTVVIYTILI---RGLCGES------------RISE------ 246
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
A ++ + + G +P TY ++++ YC+IA KA +++ EM G
Sbjct: 247 ------------AESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGL 294
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
VV + ++ KT + A + M + G PN+++YN L+D + +A NL +
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALS 354
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L E+E+ ++ PD +Y+ +I + E + G + + ++ +
Sbjct: 355 LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYC 414
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
K +E+ +++ M +G + + + + ++ AG +M+A
Sbjct: 415 KEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG-KMEA 456
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 131/361 (36%), Gaps = 59/361 (16%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P LI ++ +SL + + + +LPD T S L+ + + A+ L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 175 LQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
LQ +MK G + ++ Y +++ Y K
Sbjct: 391 LQ----------------------------------EMKKKGFLPNAVTYNTLIDGYCKE 416
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
G+ EK + + + ++ + + L D K+G+ A+ + +M KG+L D
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIIT---FSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV 473
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
Y +LI K A L KE +E G+ P V L + +GL +
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEMQEAGL--HPNV---FTLSCLIDGLCKDG------ 522
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
+ISD I F + G +L C P V Y ++I C
Sbjct: 523 ------RISDAIKL-----FLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGR 571
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
KA K F +M+ G V ++ + + +RD M L A + G PN +Y
Sbjct: 572 IFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRV 631
Query: 475 L 475
L
Sbjct: 632 L 632
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 158/383 (41%), Gaps = 37/383 (9%)
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
LD Y I+ AY + G ++ LF + + LD T + Y ++ D GK GR++
Sbjct: 214 LDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVT---YNVMLDVYGKMGRSWGR 270
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+ EL E KG+ D C ++
Sbjct: 271 IL----------------------------------ELLDEMRSKGLEFDEFTCSTVISA 296
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
EG++++ + +K K + +++ F K Y A+ + +++ C P
Sbjct: 297 CGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPD 356
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+TY + Y R + V M KG + Y++++ YGK GR DA+ L +
Sbjct: 357 SITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFS 416
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
KMK GC PNV+ YNS++ M G+ V K+ EM+ P++ ++ T+++ +
Sbjct: 417 KMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEG 476
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ + K E + G D+ ++ +++ + K+ +M G Y+
Sbjct: 477 KHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYN 536
Query: 579 SAMNALRDAGLQMQAQWLQQNFE 601
+ +NAL G A+ + Q+ +
Sbjct: 537 ALLNALAHRGDWKAAESVIQDMQ 559
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 116/567 (20%), Positives = 227/567 (40%), Gaps = 70/567 (12%)
Query: 41 VTVNPSSIINHRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDS------------FLH 88
+T+ P S+ N + F + ++ PT+ + D +FD L+
Sbjct: 66 LTIVPPSLDNTKNFNKSVNSKHPTL-------GSDPIIDEDQFDDAKFRFLSDKGKLLLN 118
Query: 89 GMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIY-- 146
++ P EL D++N K F ++ L++ L S W+ + L E ++
Sbjct: 119 SVVGSP-LHELN-DFFNSVK----FELLEADFPSLLKALDLSGNWERALLLFEWGWLHFG 172
Query: 147 ---NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMY 202
N+ D +V R + IA+ L + + + + A+ + + Y + Y
Sbjct: 173 SDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKY 232
Query: 203 YSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS-EKVAALFLECKSRKLDSTPFSTHM 261
I +++KM+ G+ Y +++ Y K+G S ++ L E +S+ L+ F+
Sbjct: 233 KRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCST 292
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
C G+ G EA KF ++K G +Y S++ F A + KE E
Sbjct: 293 VISAC---GREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEME 349
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ D +L Y+ G +++ + V+++M + + + +++ + K
Sbjct: 350 DNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGRED 409
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A++++ ++ GC P TY S++
Sbjct: 410 DALRLFSKMKDLGCAPNVYTYNSVL----------------------------------- 434
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
AM GK R D + ++ +MK GC PN +N+++ + V K+ +EM+
Sbjct: 435 AMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFE 494
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PDK ++ T+IS+Y R K Y E +G ++ + + +
Sbjct: 495 PDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESV 554
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAG 588
+QDM+++G K +E Y ++ AG
Sbjct: 555 IQDMQTKGFKPNETSYSLLLHCYSKAG 581
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/515 (20%), Positives = 217/515 (42%), Gaps = 57/515 (11%)
Query: 67 LNRDSHHQTA------VP------DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR 114
L R+S H A +P D + + + LH + + + A D +++ + +
Sbjct: 191 LGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKR-AIDLFDKMEGI-GLD 248
Query: 115 PEKSTLKLLIR-YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
P T +++ Y + W I+ L ++ + + D TCS ++++C R A
Sbjct: 249 PTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARK 308
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L +G + + +NS + + K +Y + + ++M+ DS Y ++ Y
Sbjct: 309 FLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYV 368
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+ G ++ A+ S+ + + Y + D+ GK+GR +AL+ F MK+ G
Sbjct: 369 RAGFLDEGMAVIDTMTSKGVMPNAIT---YTTVIDAYGKAGREDDALRLFSKMKDLGCAP 425
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ Y S++ + + ++ E + G + ++ + EEG V+
Sbjct: 426 NVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVL 485
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
MKN GF P + T+ ++I++Y R
Sbjct: 486 REMKNC--------------GFE---------------------PDKDTFNTLISSYARC 510
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+ K++ EM + GF CV Y++++ G + A ++ M+ KG +PN Y
Sbjct: 511 GSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSY 570
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+ L+ + +A N+R +EK+ KE+ +V P + T++ + ++ R + +++ +
Sbjct: 571 SLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQK 630
Query: 533 NGGVIDRAIAGIMVGVFSK---LSQIEELVKLLQD 564
G D + M+ +FS+ S+ E++ + +
Sbjct: 631 YGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHE 665
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/332 (19%), Positives = 150/332 (45%), Gaps = 5/332 (1%)
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
H Y + +L +MK+ G D + ++ +Y + G A ++ E K TP T
Sbjct: 478 HNYVNKVL--REMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMV--KSGFTPCVT 533
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
Y L ++L G A +DM+ KG + + Y+ L+ ++ V+ E++ KE
Sbjct: 534 -TYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKE 592
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ + + LVL + + + ++ K + ++++ FS+ +
Sbjct: 593 IYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKM 652
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A ++ + G P TY +++ Y R KAE+V +Q + VV+Y++
Sbjct: 653 FSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNT 712
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ + + G +++A+ ++++M KG +P + YN+ + + + + ++ + M
Sbjct: 713 VIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHN 772
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
P +++Y ++ Y +A + + + F + +
Sbjct: 773 CRPSELTYKILVDGYCKAGKHEEAMDFVTKIK 804
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 165/395 (41%), Gaps = 42/395 (10%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH--MYKILC 266
++K+ + G L+ CY ++ K+G + L R++D + MY +
Sbjct: 149 HDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLL-----RRVDGKLVQPNVVMYNTII 203
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
DS+ K EA + +M KGI D Y++LI F + ++ A LF + + +
Sbjct: 204 DSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEI- 262
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+P+V +L V+GF K A V
Sbjct: 263 -NPDVYTFSIL---------------------------------VDGFCKEGRVKEAKNV 288
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
++ QG P VTY S+++ YC + +KA+ +F M Q G V +Y+ M+ + K
Sbjct: 289 LAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCK 348
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
++ +AM L +M K P+V YNSL+D ++ + KL EM R V DK++
Sbjct: 349 IKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKIT 408
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y +++ A + + D + + + G D I++ K ++++ + +D+
Sbjct: 409 YNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLL 468
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+G + Y + D L +A L E
Sbjct: 469 VKGYNITVYTYTVMIQGFCDNDLFDKALALLSKME 503
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 157/338 (46%), Gaps = 1/338 (0%)
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
++ TP KIL SL K A+ R+M+ GI D + LI F+ +
Sbjct: 49 NINPTPPIFEFGKIL-GSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHT 107
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
+ +F +KG + L+ +G + + L + + ++ +
Sbjct: 108 HFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTL 167
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+NG K AA+++ ++ + P V Y +II++ C++ L ++A ++ EM KG
Sbjct: 168 INGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGI 227
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
VV YS++++ + G++ DA+ L KM ++ P+V+ ++ L+D + +++ +
Sbjct: 228 SPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKN 287
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
+ M ++ + PD V+Y +++ Y ++ + +N G + IM+ F
Sbjct: 288 VLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFC 347
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
K+ +++E + L ++M + D Y+S ++ L +G
Sbjct: 348 KIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSG 385
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Query: 121 KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
++I + KK D ++L ++ N++PD T + L+ ++ K A L+
Sbjct: 340 NIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHD 399
Query: 181 DG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
G + +NS + K H I + KMK GI D Y +++ K G +
Sbjct: 400 RGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKD 459
Query: 240 VAALFLECKSRKLDSTPFS-THMYKILCDSLGKSGRAFE-ALKFFRDMKEKGILEDPSIY 297
+F + + + T ++ T M + CD+ F+ AL M++ G + + Y
Sbjct: 460 AQNIFEDLLVKGYNITVYTYTVMIQGFCDN-----DLFDKALALLSKMEDNGCIPNAKTY 514
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGML 326
+I S E +AE+L +E +G+L
Sbjct: 515 EIIILSLFEKDENDMAEKLLREMIARGLL 543
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 166/389 (42%), Gaps = 3/389 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY +M + + + Y ++ + +G+ +K F E + + Y L D
Sbjct: 201 VYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVT---YNTLID 257
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ K GR EA + M KG+ + Y +I +K A E+ +E KG
Sbjct: 258 AYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP 317
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ Y +EG + L + M + S A++N K R A++ +
Sbjct: 318 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 377
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+Q+ +G P + TY ++I+ + R L ++A ++ EM + GF VV Y++ + +
Sbjct: 378 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 437
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
R+ +A+ +V +M KG P+V Y++++ R L + ++ +EM + V+PD V+Y
Sbjct: 438 ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 497
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+++I R E G D ++ + + + + L +M
Sbjct: 498 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 557
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+G D Y +N L +A+ L
Sbjct: 558 KGFLPDAVTYSVLINGLNKQARTREAKRL 586
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 160/354 (45%), Gaps = 3/354 (0%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+ +M+ G + + Y +++AY K+G ++ L S+ + S Y ++ +
Sbjct: 237 FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLIS---YNVIING 293
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L + G EA + +M KG D Y +L+ + A + E G+
Sbjct: 294 LCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPS 353
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ + + + ++ + M+ L+ ++ +++GFS++ A ++
Sbjct: 354 VVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILN 413
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ G P VTY + I+ +C + +A V EM +KG VV+YS++++ + + G
Sbjct: 414 EMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG 473
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ A + +M KG P+ Y+SL+ + L + L +EM + PD+ +YT
Sbjct: 474 ELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYT 533
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
T+I+AY + + + ++E G + D +++ +K ++ E +LL
Sbjct: 534 TLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLL 587
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 144/343 (41%), Gaps = 35/343 (10%)
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
A + +R+M + + Y LI F S+ E++ F E E G L + L
Sbjct: 196 LSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTL 255
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ Y + G +++ +++SM + ++ + I+NG + A ++ E++ +G
Sbjct: 256 IDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGF 315
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P +VTY +++N YC+ + +A + EM + G VV Y++++ K + AM
Sbjct: 316 TPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAME 375
Query: 456 LVAKMKAKGCEPNVWIYNSLMD---------------------------------MHGRA 482
+M+ +G PN Y +L+D +HG
Sbjct: 376 FFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHC 435
Query: 483 KNLRQVEKLW--KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
R E L +EM + + PD VSY+T+IS + R E D + E G D
Sbjct: 436 VLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAV 495
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
++ ++ ++ E L Q+M G DE Y + +NA
Sbjct: 496 TYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINA 538
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 123/614 (20%), Positives = 238/614 (38%), Gaps = 71/614 (11%)
Query: 3 MAISSSSDCSSALINTTYTCMKKSYRHTLFSTCKAFPFVTVNPSSIINHRFFQVNASTNF 62
+A+S+S S++ + C+K SY H S+ F + V S +N ++ + N
Sbjct: 115 LALSASDPSGSSI----FQCLKDSY-HVYNSSSAVFDLM-VKSYSHLN----MIDQAVN- 163
Query: 63 PTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQEL-AYDYYNEAKKLPEFRPEKSTLK 121
TI L + S +P ++S L +++ + +L A + Y E + P T
Sbjct: 164 -TINLAKSS---GFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIR-SRVSPNVYTYN 218
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+LIR + + + + LP+ T + L+ + + + A LL+ +
Sbjct: 219 ILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK 278
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G + L+++N + G + + E+M G D Y ++ Y K G+ +
Sbjct: 279 GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQA 338
Query: 241 AALFLE--------------------CKSRKLD-STPFSTHM-----------YKILCDS 268
+ E CK+R L+ + F M Y L D
Sbjct: 339 LVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDG 398
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
+ G EA + +M E G Y + I + ++ A + +E EKG+ D
Sbjct: 399 FSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 458
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
++ + +G +++ + + M + +++ G + R A + +
Sbjct: 459 VVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQ 518
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+++ G P + TY ++INAYC +KA + EM KGF V YS ++ K
Sbjct: 519 EMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQA 578
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMD------------------MHGRAKNLRQVEK 490
R R+A L+ K+ + P+ Y++L++ M G + + ++
Sbjct: 579 RTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGL---MHEADR 635
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
+++ M R P + Y +I + R Y E +G V ++
Sbjct: 636 VFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALF 695
Query: 551 KLSQIEELVKLLQD 564
K EE+ +++ D
Sbjct: 696 KEGMNEEMSEVIGD 709
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV- 488
++ + MV Y I A+ + K+ G P V YNS++D R++ ++
Sbjct: 138 YNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLS 197
Query: 489 -EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
E++++EM R +V+P+ +Y +I + E + + E NG + + ++
Sbjct: 198 AEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLID 257
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
+ K+ +I+E LL+ M S+G + + Y+ +N L G M+ W
Sbjct: 258 AYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREG-SMKEAW 304
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/498 (19%), Positives = 210/498 (42%), Gaps = 56/498 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P K ++ L +L + + Q + Y N + E T +L++ L ++ + D+
Sbjct: 141 PSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELN--VYTYNMLLKALCKNDRVDAAR 198
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL---LQVFITDGEIALLAFNSAMG 194
L + +PDA + + +V+S R K + A L ++ F+ +N+ +
Sbjct: 199 KLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVP-------VYNALIN 251
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
G+ + H ++ +M GI D Y ++ ++G+ E A+ + R
Sbjct: 252 GFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLR--GC 309
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---CSFASITEVK 311
+P + H + L GR EAL + M ++G + Y +LI CS+ + E
Sbjct: 310 SP-NVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVE-- 366
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A + ++ E G+ + E T ++
Sbjct: 367 -AVSVSQKMERNGVFPN-----------------ETTYS------------------TLI 390
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+GF+K A +++ ++I+ GC+P V Y +++ CR ++++ A + M
Sbjct: 391 DGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCP 450
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ +++ + +G+ AM ++ +M+ GC PNV YN ++D AK R+ ++
Sbjct: 451 PNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQI 510
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
E+E ++ + V+Y T++S + A F ++ + + G D ++ + K
Sbjct: 511 VGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCK 570
Query: 552 LSQIEELVKLLQDMKSEG 569
+++ ++L+ + +G
Sbjct: 571 QGEVKTAIQLVDRLTKKG 588
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 166/382 (43%), Gaps = 47/382 (12%)
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALK-FFR-------------------------- 283
KL+ + ++ I+ ++ ++G A +ALK F+R
Sbjct: 100 KLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKF 159
Query: 284 --------DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
+MK GI + Y L+ + V A +L E KG + D +
Sbjct: 160 QMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTV 219
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
V G VE+ ++ + ++K + A++NGF + +++ ++ +G
Sbjct: 220 VSSMCRLGKVEEAREL-----SMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGI 274
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P +TY+++IN + A V +M +G V ++S++ Y GR+ +A+
Sbjct: 275 DPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALD 334
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE--KLWKEMERRKVTPDKVSYTTVISA 513
L +M +G EPN YN+L +HG + VE + ++MER V P++ +Y+T+I
Sbjct: 335 LWNRMIQEGSEPNTVAYNTL--IHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDG 392
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ +A + + +N+ NG + + + MV V + S + L+++M + +
Sbjct: 393 FAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPN 452
Query: 574 ERLYHSAMNALRDAGLQMQAQW 595
+++ + L +G + +W
Sbjct: 453 TITFNTFIKGLCCSG---KTEW 471
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 21/223 (9%)
Query: 376 KRRGYWAAVKVYEQLIS----QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
KR GY + + L+ +G + + +INAY R L +A K F + + G
Sbjct: 81 KRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCK 140
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
V Y+ ++ + + + MK G E NV+ YN L+ + + KL
Sbjct: 141 PSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKL 200
Query: 492 WKEMERRKVTPDKVSYTTVISAYNR------AREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
EM + PD VSYTTV+S+ R ARE M +K + + +
Sbjct: 201 LAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSF-----------VPVYNAL 249
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ F + ++EE+ +L +M EG D Y + +N L + G
Sbjct: 250 INGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMG 292
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 119/282 (42%), Gaps = 32/282 (11%)
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+++ MK + ++ + ++N + + A+K + ++ GC P Y +++A
Sbjct: 95 LLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALL 154
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN-- 468
+ ++ M++ G + V Y+ ++ K R+ A L+A+M KGC P+
Sbjct: 155 SENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAV 214
Query: 469 ----------------------------VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
V +YN+L++ R + +V +L+ EM +
Sbjct: 215 SYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGI 274
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID-RAIAGIMVGVFSKLSQIEELV 559
PD ++Y+TVI+ + +M + + + G + +M G F ++ E +
Sbjct: 275 DPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMG-GRLCEAL 333
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
L M EG++ + Y++ ++ L G ++A + Q E
Sbjct: 334 DLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKME 375
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 134/331 (40%), Gaps = 7/331 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ F S + G + E A D +N + P LI L K V
Sbjct: 311 PNVHTFTSLMKGYFMGGRLCE-ALDLWNRMIQEGS-EPNTVAYNTLIHGLCSYGKMVEAV 368
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
S+S+ + V P+ T S L+ +A A+ + IT+G + ++ + +
Sbjct: 369 SVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVL 428
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ M+ + + E M + ++ + ++ G +E A+ + + R+ P
Sbjct: 429 CRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTE--WAMKVLNQMRQYGCAP 486
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
T ++L D L + R EAL+ +++E I + Y +++ F K A ++
Sbjct: 487 NVTTYNEVL-DGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQI 545
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFS 375
+ G D ++ Y ++G V+ + +V+ + D + +++ G
Sbjct: 546 AGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVC 605
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
G AV +++I++G P + T+ +++
Sbjct: 606 NWIGVDEAVVHLDKMINEGICPNRATWNALV 636
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/468 (19%), Positives = 192/468 (41%), Gaps = 39/468 (8%)
Query: 150 PDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMY------ 202
PD + C++L+ + C R R A L + + + A+N+ + GY +
Sbjct: 76 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 135
Query: 203 ------------YSTIL--------VYEKMKSAGIVLDSGC------YCQIMEAYYKIGD 236
Y+ I+ V E + +L GC Y ++EA K
Sbjct: 136 IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG 195
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+ + E +++ TP + Y ++ + + + GR +A +F + G D
Sbjct: 196 FGQAMEVLDEMRAKG--CTP-NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y +++ + + EELF E EK + + LV + G+VE+ + V+E M
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ + ++N K+ A + + S GC P ++Y +++ CR +
Sbjct: 313 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 372
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
A+++ EM +K V +++ + + + G I A L+ +M GCE N+ YN+L+
Sbjct: 373 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 432
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+ + +L+ M P+ ++YTT+++ A D + E
Sbjct: 433 NGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCA 489
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ ++V F + ++E ++L++ M G + Y++ ++ +
Sbjct: 490 PNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI 537
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 131/271 (48%), Gaps = 3/271 (1%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+T + I+ +++ K GR +A +F +M G D Y +++ + A+EL
Sbjct: 319 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 378
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
KE K + + + ++GL+E+ ++E M +++ A+VNGF +
Sbjct: 379 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 438
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
+A++++ S C P +TY +++ C A ++ EM QK VV +
Sbjct: 439 GRVDSALELF---YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTF 495
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+ +V+ + + G + +A+ LV +M GC PN+ YN+L+D + N + +L +
Sbjct: 496 NVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVS 555
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
V+PD V+Y+++I +R + +K ++
Sbjct: 556 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 586
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 134/310 (43%), Gaps = 7/310 (2%)
Query: 277 EALKFFRDMKEKGILEDPSIY--ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
EA + +G E P +Y LI + A + + AE G D
Sbjct: 61 EAARLVDRATSRG--EAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
LV Y G ++ ++ SM A + I+ G R A+ + + ++ +G
Sbjct: 119 LVAGYCRYGQLDAARRLIASMPVAPDAYT---YTPIIRGLCDRGRVGEALSLLDDMLHRG 175
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
C P VTY ++ A C+ + +A +V EM+ KG +V Y+ ++ + GR+ DA
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ ++ + G +P+ Y +++ AK VE+L+ EM + P++V++ ++ +
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
R + ++ + +G + + I++ K ++++ + L +M S G D
Sbjct: 296 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 355
Query: 575 RLYHSAMNAL 584
Y + + L
Sbjct: 356 ISYTTVLKGL 365
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 161/398 (40%), Gaps = 16/398 (4%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFS--THMYKIL 265
V + +G +D Y ++ Y + G L+ R + S P + + Y +
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQ--------LDAARRLIASMPVAPDAYTYTPI 151
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
L GR EAL DM +G Y L+ + T A E+ E KG
Sbjct: 152 IRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 211
Query: 326 LRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
P + V++ EG V+ + + + + + ++ G + +
Sbjct: 212 --TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDV 269
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+++ +++ + C+P +VT+ ++ +CR + +A +V +M G + ++
Sbjct: 270 EELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINT 329
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K GR+ DA + M + GC P+ Y +++ RA+ ++L KEM R+ P+
Sbjct: 330 ICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 389
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+V++ T I + + + +G ++ +V F +++ ++L
Sbjct: 390 EVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFY 449
Query: 564 DMKSEGTKLD-ERLYHSAMNALR-DAGLQMQAQWLQQN 599
M + + L NA R DA ++ A+ LQ++
Sbjct: 450 SMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 487
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 112/276 (40%), Gaps = 3/276 (1%)
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L A +G D +C KL+ G V+ + + + + +V
Sbjct: 62 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 121
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G+ + AA ++ + S P TY II C +A + +M +G
Sbjct: 122 GYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 178
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
VV Y+ ++ K+ AM ++ +M+AKGC PN+ YN +++ R + +
Sbjct: 179 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+ PD VSYTTV+ A+ ++ + + E + + ++V F +
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 298
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+E +++L+ M G + L + +N + G
Sbjct: 299 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQG 334
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/476 (20%), Positives = 180/476 (37%), Gaps = 39/476 (8%)
Query: 59 STNF-PTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEK 117
ST F +E+ + + P+ ++ ++GM ++ + + A ++ N F+P+
Sbjct: 193 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD-AREFLNRLSSY-GFQPDT 250
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
+ +++ L +K+W+ + L + N +P+ T LV R + A +L+
Sbjct: 251 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 310
Query: 178 FITDGEIALLAF-NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
G A N + K M S G D+ Y +++ +
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 370
Query: 237 SEKVAALFLE-----CKSRKLDSTPF--------------------STH-------MYKI 264
E L E C ++ F S H Y
Sbjct: 371 WEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNA 430
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L + GR AL+ F M K + Y +L+ + + A EL E +K
Sbjct: 431 LVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 487
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ LV + ++GL+++ +++VE M + +++G +K A+
Sbjct: 488 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEAL 547
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
++ L+S G P VTY+SII R +A K+F +Q G V Y+ ++
Sbjct: 548 ELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLAL 607
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
K A+ A M + GC PN Y +L++ L++ L +E+ R V
Sbjct: 608 CKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
>gi|410110103|gb|AFV61131.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
alba]
Length = 419
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 168/355 (47%), Gaps = 7/355 (1%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 1 GLFDEMRQRALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLI 57
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A +F + G D ++ ++ + L + ++ MK A +
Sbjct: 58 ELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVM 117
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++ + + + + A+ V+ ++ C+ T +I+ Y ++ + +A+K+
Sbjct: 118 PNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M++ G + VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G+
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ +
Sbjct: 238 TLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQIL 297
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M+ + + + +LL ++K + D +A++ L AG +A ++
Sbjct: 298 FQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYV 348
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 167/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K A+F +L + F+ + Y + +
Sbjct: 39 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIAIF-----SRLKRSGFTPDLVAYNAMIN 93
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +MK G++ + S Y++L+ + + A +F E E L
Sbjct: 94 VFGKAKLFREARSLIGEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLL 153
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 154 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 213
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 214 RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV 273
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + ++ +++ + RA + ++L E++R PD +
Sbjct: 274 GKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKR----PDNIPR 329
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ + SK + +V++ M+
Sbjct: 330 DTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYXNVVEVFDKMRG 389
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 390 LGYFPDSNVIAVVLNA 405
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 160/344 (46%), Gaps = 11/344 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +MK+AG++ ++ Y ++ Y + + ++F
Sbjct: 85 LVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFS 144
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 145 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 199
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M++ ++ +
Sbjct: 200 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPN 259
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G Q+ + ++I AY R L + A+++
Sbjct: 260 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLH 319
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ + + + + GRI +A ++ + G ++ ++ ++ + + K
Sbjct: 320 ELKRPD----NIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYK 375
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
V +++ +M PD V++AY + +EFD Y
Sbjct: 376 KYXNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVY 419
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 137/348 (39%), Gaps = 47/348 (13%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA- 171
F P+ +I ++K + SL + K V+P+ + S L+ V +KF A
Sbjct: 81 FTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTSSYSTLLTMYVENKKFLEAL 140
Query: 172 ------------------NTLLQVFITDG-----------------EIALLAFNSAMGGY 196
N ++ V+ G E ++++N+ + Y
Sbjct: 141 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 200
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
++ I ++ M+ I + Y +M Y K + EK L E +SR ++
Sbjct: 201 GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNS 260
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y + GK G+ A F+ ++ G+ D ++ ++I ++ V A+ L
Sbjct: 261 IT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 317
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E L+ P+ + ++I G +E+ V +A + +++
Sbjct: 318 LHE------LKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 371
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
SK + Y V+V++++ G P A ++NAY ++ + KA V+
Sbjct: 372 SKYKKYXNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVY 419
>gi|357444861|ref|XP_003592708.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355481756|gb|AES62959.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 1430
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 204/463 (44%), Gaps = 47/463 (10%)
Query: 81 KKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLS 140
K F +HG +K+ + + A +++ ++ F P+ S +LI L ++K D +SL
Sbjct: 266 KTFCVLIHGFVKESRVDK-ALQLFDKMRREDSFTPDVSLYDVLIGGLCKNKDTDRAISLF 324
Query: 141 EDFKIYNVLPDAHTCSRLVASCVRARKFKIA--------------------NTLLQVFIT 180
+ K + V PD ++L+ SC K ++ N LL ++
Sbjct: 325 SEMKEFGVRPDIGILTKLI-SCFSDSKSMVSRLLEEIPEGEEDEQTLVLIYNALLTCYVN 383
Query: 181 DG---------EIALLAFNSAMGGYNKLHMYYSTI--LVYEKMKSAGIVLDSGCYCQIME 229
DG + + + +S N++ +++ T+ +V+ + S IV+D
Sbjct: 384 DGLMDEAYRLIRMMIQSKSSTDSDENRMDVFFKTVKRMVFPNITSFSIVID--------- 434
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
+ K + +LF + R+ P + +Y L DSL KS R ++ + R+MKE G
Sbjct: 435 GFLKNDQLDLALSLFNDM--RRFVDKP-TILIYNNLIDSLCKSNRLEKSYELLREMKELG 491
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
I Y S+ +V A + KE G + LV + G V +
Sbjct: 492 IEPTHFTYNSIYGCLCKRKDVSAACVMLKEMGSCGHGPWIKHTTLLVKELCDHGRVIEAC 551
Query: 350 DVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+ +++M + D +S A + G + A+K+++ L S G P V + +I
Sbjct: 552 EFLDNMTQQGF-LPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRG 610
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
C++ +++AE +F E+ ++G VV Y+ + + K G + AM + +M + P+
Sbjct: 611 LCKVNRFTEAEDLFHELVKRGLSPSVVTYNLFIDCWCKNGNVDKAMAHLFRMTKEDKVPS 670
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
V Y +L+D + + L+KEME+ P+++++ +I
Sbjct: 671 VVTYTTLVDGFCKEERPDDAILLFKEMEKNGCPPNQITFMALI 713
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/419 (18%), Positives = 172/419 (41%), Gaps = 24/419 (5%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
FN+ +++ H I + + + ++ G + + + + LF E
Sbjct: 91 FTFNAIASIFSRSHQTQPLIHLAKHLPNSSCSFTPGAFSFFLRCLGNLRLVHQANQLFDE 150
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
SRK P + + L + + K G +MK G D +I ++ +
Sbjct: 151 -MSRKGLFVP-DRYSHNTLLEVISKCGLVDLMEMRLNEMKGFGWEFDKYTLTPVIVTYCN 208
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
A ++KE EEKG + D VC + L + + G V+K ++VE M +++S+
Sbjct: 209 AQRFDQALSVYKEMEEKGWV-DERVCSMMALCFSKLGEVDKAFELVERMGECGMRLSEKT 267
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT-YASIINAYCRIALYSKAEKVFIEM 425
C +++GF K A+++++++ + V+ Y +I C+ +A +F EM
Sbjct: 268 FCVLIHGFVKESRVDKALQLFDKMRREDSFTPDVSLYDVLIGGLCKNKDTDRAISLFSEM 327
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
++ G + + +++ + + + + + + V IYN+L+ + +
Sbjct: 328 KEFGVRPDIGILTKLISCFSDSKSMVSRLLEEIPEGEEDEQTLVLIYNALLTCYVNDGLM 387
Query: 486 RQVEKLWKEM--------------------ERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
+ +L + M +R V P+ S++ VI + + + D+ +
Sbjct: 388 DEAYRLIRMMIQSKSSTDSDENRMDVFFKTVKRMVFPNITSFSIVIDGFLKNDQLDLALS 447
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+N+ R I ++ K +++E+ +LL++MK G + Y+S L
Sbjct: 448 LFNDMRRFVDKPTILIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNSIYGCL 506
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/469 (20%), Positives = 207/469 (44%), Gaps = 10/469 (2%)
Query: 114 RPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
P T + ++ LV++K + +SL + ++ + D T + L+ + ++
Sbjct: 56 NPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLS 115
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
++ + G + FN+ + G + + ++K+ + G LD Y ++
Sbjct: 116 FSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLING 175
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
K+G L + + MY ++ D++ K+ +A + M K I
Sbjct: 176 LCKVGRITAALQLLKRVDGKLVQPNAV---MYNMIIDNMCKAKLVNDAFDLYSQMVAKRI 232
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKT 348
D Y +LI F++++++ A +LF + +++ + +P V +L+ + +EG V
Sbjct: 233 CPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENI--NPNVYTFNILVDGFCKEGKVNDA 290
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
V+ M +K ++++G+ A +++ + S G I Y +++N
Sbjct: 291 KVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNG 350
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+C+I + +A +F EM+ + VV YSS++ K GRI A+ LV +M +G PN
Sbjct: 351 FCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPN 410
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ Y+S++D + ++ + L ++ + + PD +YT +I ++ + +
Sbjct: 411 IVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFE 470
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ + G +D +M+ F ++ + LL M+ G + + Y
Sbjct: 471 DLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTY 519
>gi|449525162|ref|XP_004169587.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73710-like [Cucumis sativus]
Length = 1026
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/467 (20%), Positives = 200/467 (42%), Gaps = 60/467 (12%)
Query: 140 SEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKL 199
+E F+I +P+ S V +CVR K ++ +T +N+ + Y K
Sbjct: 293 TELFRIGTRIPN-RKVSPEVDNCVR--KPRLTST---------------YNTLIDLYGKA 334
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
V+ +M + GI +D+ + ++ G + L L+ + R L +P T
Sbjct: 335 GRLKDAANVFGEMLTTGISMDTITFNTMIYTCGSHGHLAEAETLLLKMEERGL--SP-DT 391
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
Y I G ALK +R ++E G+ D + +L+ + V+ E + E
Sbjct: 392 KTYNIFLSLYANDGNIDGALKCYRRIREVGLFPDVVTHRALLHVLSERNMVEDVENVIAE 451
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
E+ +L D +++ MYI EGL+++ ++E + ++S IS AI++ ++++ G
Sbjct: 452 MEKSHILLDEHSLPRVIKMYINEGLLDRAKILLEKYR-LDTELSPRISAAIIDAYAEK-G 509
Query: 380 YW-------------------------------------AAVKVYEQLISQGCIPGQVTY 402
W A +++ + ++G P + TY
Sbjct: 510 LWFEAESIFLWKRDLAGKKXDVMEYNVMIKAYGKAELYEKAFLLFKSMKNRGTWPDECTY 569
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
S+I + L +A ++ EMQ+ GF +S+++A Y + G + DA+ + M
Sbjct: 570 NSLIQMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVEVYDMMVH 629
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
EPN +Y L++ + K ++ ME+ + +++ T++I A+++ +
Sbjct: 630 ADVEPNEILYGVLVNGFAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAFSKVGSLED 689
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ YN + D + M+ +++ L + E ++ +D++ G
Sbjct: 690 ARRIYNRMKNMEDGADTIASNSMINLYADLGMVSEAKQVFEDLRERG 736
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/439 (20%), Positives = 196/439 (44%), Gaps = 13/439 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD K ++ FL D + A Y +++ F P+ T + L+ L + + +
Sbjct: 389 PDTKTYNIFLSLYANDGNI-DGALKCYRRIREVGLF-PDVVTHRALLHVLSERNMVEDVE 446
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
++ + + ++L D H+ R++ + A LL+ + D E++ + + Y
Sbjct: 447 NVIAEMEKSHILLDEHSLPRVIKMYINEGLLDRAKILLEKYRLDTELSPRISAAIIDAYA 506
Query: 198 KLHMYYS--TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ +++ +I ++ K AG D Y +++AY G +E FL KS K T
Sbjct: 507 EKGLWFEAESIFLW-KRDLAGKKXDVMEYNVMIKAY---GKAELYEKAFLLFKSMKNRGT 562
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
Y L EA + +M+ G ++++I S+A + + A E
Sbjct: 563 WPDECTYNSLIQMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVE 622
Query: 316 LFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
++ + +P L VL+ + E G E+ L M+ + + + + +++
Sbjct: 623 VYDMMVHADV--EPNEILYGVLVNGFAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKA 680
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
FSK A ++Y ++ + + S+IN Y + + S+A++VF +++++G+
Sbjct: 681 FSKVGSLEDARRIYNRMKNMEDGADTIASNSMINLYADLGMVSEAKQVFEDLRERGYADG 740
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V++++M+ +Y G + +A+ + +MK G + + +++ + +R+ +L
Sbjct: 741 -VSFATMIYLYKNIGMLDEAIEVAEEMKESGLLRDATSFRKVIECYAINGQVRECGELLH 799
Query: 494 EMERRKVTPDKVSYTTVIS 512
EM RK+ PD ++ + +
Sbjct: 800 EMVTRKLLPDNRTFNVLFT 818
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 152/369 (41%), Gaps = 29/369 (7%)
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
E+V +F KS+K D P H Y I+ +LG++ + E + +M E G++ + Y
Sbjct: 142 ERVIQVFQWFKSQK-DYVPNVIH-YNIVLRTLGQAQKWDELRLCWNEMAENGVVPTNNTY 199
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
LI + + VK A K +G+ D EV + V+ ++ D E
Sbjct: 200 GMLIDVYGKVGLVKEALLWIKHMTVRGIFPD-EVTMNTVVRVLK--------DAGEFDSA 250
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
K C +N F +V + ++ P + +C L+
Sbjct: 251 DKFYKDWCRGLVELNDFDLNS------RVEDFGVNSAVEPITPKH------FCXTELFRI 298
Query: 418 AEKVFIEMQQKGFDKCV------VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
++ D CV Y++++ +YGK GR++DA + +M G +
Sbjct: 299 GTRIPNRKVSPEVDNCVRKPRLTSTYNTLIDLYGKAGRLKDAANVFGEMLTTGISMDTIT 358
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+N+++ G +L + E L +ME R ++PD +Y +S Y D +K Y R
Sbjct: 359 FNTMIYTCGSHGHLAEAETLLLKMEERGLSPDTKTYNIFLSLYANDGNIDGALKCYRRIR 418
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
G D ++ V S+ + +E++ ++ +M+ LDE + + GL
Sbjct: 419 EVGLFPDVVTHRALLHVLSERNMVEDVENVIAEMEKSHILLDEHSLPRVIKMYINEGLLD 478
Query: 592 QAQWLQQNF 600
+A+ L + +
Sbjct: 479 RAKILLEKY 487
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 190/418 (45%), Gaps = 25/418 (5%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T LI+ D L + + P T S ++AS R A +
Sbjct: 564 PDECTYNSLIQMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVEV 623
Query: 175 LQVFI-TDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + D E + + + G+ ++ + + M+ +GI + +++A+ K
Sbjct: 624 YDMMVHADVEPNEILYGVLVNGFAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAFSK 683
Query: 234 IGDSEKVAALFLECKSRKLDS-TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+G E ++ K+ + + T S M + D G EA + F D++E+G +
Sbjct: 684 VGSLEDARRIYNRMKNMEDGADTIASNSMINLYADL----GMVSEAKQVFEDLRERGYAD 739
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
S +A++I + +I + A E+ +E +E G+LRD K++ Y G V + +++
Sbjct: 740 GVS-FATMIYLYKNIGMLDEAIEVAEEMKESGLLRDATSFRKVIECYAINGQVRECGELL 798
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA--SIINA-Y 409
M KL + D + ++ F+ + ++ QL + + TYA +II A +
Sbjct: 799 HEMVTRKL-LPDNRTFNVL--FTILKKGVIPLEAVSQL--ESAFHEEKTYARQAIIAAVF 853
Query: 410 CRIALYSKAEK---VFI--EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+ L++ A + F+ E+Q F AY+ + YG +I A+ + KMK +
Sbjct: 854 SGLGLHASALESCDTFLKAEVQLDSF-----AYNVAIYAYGAAEKIDKALNIFMKMKDQN 908
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
+P++ Y +L+ +G+A + V++++ +++ ++ +K + +I+ + A +D+
Sbjct: 909 LKPDLVTYINLVGCYGKAGMIEGVKQIYSQLKYGEIELNKSLFFAIINTFRSADRYDL 966
>gi|410110077|gb|AFV61118.1| pentatricopeptide repeat-containing protein 123, partial
[Coelocarpum swinglei]
Length = 440
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 155/325 (47%), Gaps = 3/325 (0%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + + L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 1 GLFDEMREKALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLI 57
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A +F + G D ++ ++ + L ++ M+ A +
Sbjct: 58 ELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVM 117
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ A++ + + + + A+ V+ ++ C+ T +I+ Y ++ + +A+K+
Sbjct: 118 PNASSYSALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M++ G + VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G+
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ +
Sbjct: 238 TLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEIDQIL 297
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMK 566
M+ + + + +LL ++K
Sbjct: 298 FQTMIXAYERAGLVAHAKRLLHELK 322
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 152/319 (47%), Gaps = 6/319 (1%)
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
F +M+EK + D Y++LI F A ++ E+ + D + L+ +
Sbjct: 2 LFDEMREKALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ K + + +K + A++N F K + + A + ++ + G +P
Sbjct: 62 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPNAS 121
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS---MVAMYGKTGRIRDAMWLV 457
+Y++++ Y + +A VF EM++ KC++ ++ M+ +YG+ G ++A L
Sbjct: 122 SYSALLTMYVENKKFLEALSVFAEMREI---KCLLDLTTCNIMIDVYGQLGMAKEADKLF 178
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
M+ G EPNV YN+L+ ++G A+ + L++ M+R+ + + V+Y +++ Y +
Sbjct: 179 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 238
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
E + E + G + ++ ++ K+ +++ L Q +++ G ++D+ L+
Sbjct: 239 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEIDQILF 298
Query: 578 HSAMNALRDAGLQMQAQWL 596
+ + A AGL A+ L
Sbjct: 299 QTMIXAYERAGLVAHAKRL 317
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 166/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F+ + Y + +
Sbjct: 39 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKRSGFTPDLVAYNAMIN 93
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ +A +M+ G++ + S Y++L+ + + A +F E E L
Sbjct: 94 VFGKAKLFRDARSLISEMRTAGVMPNASSYSALLTMYVENKKFLEALSVFAEMREIKCLL 153
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 154 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 213
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 214 RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKI 273
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K++ G E + ++ +++ + RA + ++L E++R PD +
Sbjct: 274 GKLDRAAMLFQKLRTSGVEIDQILFQTMIXAYERAGLVAHAKRLLHELKR----PDNIPR 329
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ +FSK + +V++ M
Sbjct: 330 DTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMYG 389
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 390 LGYFPDSNVIALVLNA 405
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 164/353 (46%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG++ ++ Y ++ Y + + ++F
Sbjct: 85 LVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPNASSYSALLTMYVENKKFLEALSVFA 144
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 145 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 199
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 200 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 259
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L + G Q+ + ++I AY R L + A+++
Sbjct: 260 SITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEIDQILFQTMIXAYERAGLVAHAKRLLH 319
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ + + + + GRI +A ++ + G ++ ++ ++ + + K
Sbjct: 320 ELKRPD----NIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYK 375
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + EFD + Y E + G V
Sbjct: 376 KYANVVEVFDKMYGLGYFPDSNVIALVLNAYGKLHEFDKANEVYMEMQDVGCV 428
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 141/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P S+ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 118 PNASSYSALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 238 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKIGKLDRAAMLFQKLRTSGVEID 294
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
++ ++I ++ V A+ L E L+ P+ + ++I G +E+ V
Sbjct: 295 QILFQTMIXAYERAGLVAHAKRLLHE------LKRPDNIPRDTAIHILAGAGRIEEATYV 348
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A ++NAY +
Sbjct: 349 FRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMYGLGYFPDSNVIALVLNAYGK 408
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA +V++EMQ G
Sbjct: 409 LHEFDKANEVYMEMQDVG 426
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 86/195 (44%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++++G+ +D + ++
Sbjct: 244 ANNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEIDQILFQTMIX 303
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P T ++ L +GR EA FR + G
Sbjct: 304 AYERAGLVAHAKRLLHELK--RPDNIPRDTAIH-----ILAGAGRIEEATYVFRQAIDAG 356
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 357 EVKDITVFERMIHLFSKYKKYANVVEVFDKMYGLGYFPDSNVIALVLNAYGKLHEFDKAN 416
Query: 350 DVVESMKNAKLKISD 364
+V M++ SD
Sbjct: 417 EVYMEMQDVGCVFSD 431
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 192/447 (42%), Gaps = 60/447 (13%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
A N+ + + KL M + V+ KMK GI Y +M V+A+F++
Sbjct: 189 AANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGL--------VSAMFVDS 240
Query: 248 KSR----------KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
R K D ++T M K C K+G+ +A++ RDM+ +G D Y
Sbjct: 241 AERVFEVMESGRIKPDIVTYNT-MIKGYC----KAGQTQKAMEKLRDMETRGHEADKITY 295
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++I + + ++ L++E +EKG+ P ++ +EG + + V E+M
Sbjct: 296 MTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIR 355
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
K + I +++G++K A+++ ++I +G P VTY+ ++N C+ +
Sbjct: 356 KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 415
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A F + G + YSS++ GK GR+ +A L +M KGC + + YN+L+D
Sbjct: 416 ALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 475
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKV-SYTTVIS------------------------ 512
+ + + + L+K ME + V +YT ++S
Sbjct: 476 AFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGIT 535
Query: 513 ---AYNRAREFDMCV--------KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
A RA +C+ K +E G ++D A M+ K +I+E KL
Sbjct: 536 PTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKL 594
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAG 588
+ G ++ R+ +NALR G
Sbjct: 595 ADGITERGREVPGRIRTVMINALRKVG 621
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 155/387 (40%), Gaps = 47/387 (12%)
Query: 223 CYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFF 282
CY +++ D +++ + E K + P + L S GK G E L +
Sbjct: 154 CYVSLVDVLALAKDVDRIRFVSSEIKKFEF---PMTVSAANALIKSFGKLGMVEELLWVW 210
Query: 283 RDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYI 340
R MKE GI Y L+ S V AE +F E E G ++ P++ ++ Y
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIK-PDIVTYNTMIKGYC 268
Query: 341 EEGLVEKTLDVVESMKN---------------AKLKISDCISCA---------------- 369
+ G +K ++ + M+ A SD SC
Sbjct: 269 KAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPH 328
Query: 370 ----IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++ G K V+E +I +G P Y +I+ Y + A ++ M
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 388
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+GF VV YS +V K GR+ +A+ + G N Y+SL+D G+A +
Sbjct: 389 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRV 448
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI---A 542
+ E+L++EM + T D Y +I A+ + R+ D + + G D+ +
Sbjct: 449 DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGC-DQTVYTYT 507
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEG 569
++ G+F K + EE +KL M +G
Sbjct: 508 ILLSGMF-KEHRNEEALKLWDMMIDKG 533
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%)
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y S+++ + V E+++ F V A ++++ +GK G + + +W+ KMK
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
G EP ++ YN LM+ A + E++++ ME ++ PD V+Y T+I Y +A +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
++ + G D+ M+ S V L Q+M +G ++ + +
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 582 NALRDAG 588
L G
Sbjct: 335 GGLCKEG 341
>gi|357463937|ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491298|gb|AES72501.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 946
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/521 (20%), Positives = 212/521 (40%), Gaps = 75/521 (14%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKL-----LIRYLVQSK 131
P++ + +++ G+ + Q+ +L YD L R + + + +IR
Sbjct: 262 TPNSYCYAAYIEGLCNNHQS-DLGYDL------LRALRENNAPIDVYAYTAVIRGFCNEM 314
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFN 190
K D + + D + ++PD H S L+ + A L + I G + + +
Sbjct: 315 KLDKAMQVFYDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVS 374
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ + ++ + ++++K +G+ LD Y + ++ +K+G ++VA + + KS
Sbjct: 375 CILHCFAEMGEDSRVVDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSM 434
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+D F Y G+ +A F++M+EKG D Y L V
Sbjct: 435 HID---FDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHV 491
Query: 311 KLAEELFKEAEEKGM-----------------------------LRDP--EVCLKLVLMY 339
A +L + +G+ ++D E+ +V Y
Sbjct: 492 SEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDESVEIYTAMVSGY 551
Query: 340 IEEGLVEKTLDVVESMKNAK---------LKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
E L+EK+ ++ + N ++S + ++ ++ A +++
Sbjct: 552 CEADLIEKSYELFHELSNRGDTAQESSCLKQLSKVLYSKVLAELCQKGNMQRARSLFDFF 611
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT--- 447
+ +G P VTY +I +YC + +A +F +M+ +G V+ Y+ V + GK+
Sbjct: 612 LGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYT--VLLDGKSKQA 669
Query: 448 ----------GRIRDAMWLVA----KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
G+ +DA + V+ MK + P+V IY L+D H + N +L+
Sbjct: 670 RSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRLFN 729
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
E+ +R + PD V+YT + S + ++ V YNE G
Sbjct: 730 EVMKRGLEPDNVTYTALFSGLLNSGNSEIAVTLYNEMSSKG 770
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 110/550 (20%), Positives = 216/550 (39%), Gaps = 66/550 (12%)
Query: 81 KKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK-------W 133
++ DS ++ Q ++ ++ +KL E K L+R V K +
Sbjct: 114 RRLDSLFRDIIISHSKQNPLFEIHDLFEKLLEGVNVKDKNHYLLRAFVGFVKACVGLNMF 173
Query: 134 DSIVSLSEDFKI--YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG--------E 183
D + F+I + +LP+ C+ L+ V+ + +A + + G
Sbjct: 174 DDAIDFMFMFQIRRFGILPNIFACNFLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYA 233
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
I + A + G + V+++MK AG+ +S CY +E S+ L
Sbjct: 234 IIIKALGTKGGDLKQASG------VFDEMKEAGVTPNSYCYAAYIEGLCNNHQSDLGYDL 287
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
++ + ++ P + Y + + +A++ F DM+ + ++ D +Y+SLIC
Sbjct: 288 L---RALRENNAPIDVYAYTAVIRGFCNEMKLDKAMQVFYDMEWQRLVPDCHVYSSLICG 344
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ ++ A +L+++ KG+ + + ++ + E G + +D + +K + + +
Sbjct: 345 YCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDSRVVDTFKEVKQSGVFLD 404
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+ + K + E L S Y + I YC KA +F
Sbjct: 405 GVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYCLQGKPDKAYIIFK 464
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN--------------- 468
EM++KGF VVAY+ + A + +AM L+ M ++G +PN
Sbjct: 465 EMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEG 524
Query: 469 ----------------VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD--------- 503
V IY +++ + A + + +L+ E+ R T
Sbjct: 525 KIEEAEGYFNSMKDESVEIYTAMVSGYCEADLIEKSYELFHELSNRGDTAQESSCLKQLS 584
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
KV Y+ V++ + ++ F G D IM+ + ++ ++E L Q
Sbjct: 585 KVLYSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQ 644
Query: 564 DMKSEGTKLD 573
DMKS G K D
Sbjct: 645 DMKSRGIKPD 654
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/368 (19%), Positives = 161/368 (43%), Gaps = 8/368 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAY-YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
+++++KS G+ + Y I++A K GD ++ + +F E K + TP +++ Y
Sbjct: 216 IFDRIKSLGLCPNHHTYAIIIKALGTKGGDLKQASGVFDEMKEAGV--TP-NSYCYAAYI 272
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ L + ++ R ++E D Y ++I F + ++ A ++F + E + ++
Sbjct: 273 EGLCNNHQSDLGYDLLRALRENNAPIDVYAYTAVIRGFCNEMKLDKAMQVFYDMEWQRLV 332
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D V L+ Y + + K LD+ E M +K + I I++ F++ V
Sbjct: 333 PDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDSRVVDT 392
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
++++ G V Y + ++ ++ + + +++ D + Y++ + Y
Sbjct: 393 FKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYCL 452
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G+ A + +M+ KG +P+V YN L +++ + L M+ + V P+ +
Sbjct: 453 QGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTT 512
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
+ +I + + + ++N + I A MV + + IE+ +L ++
Sbjct: 513 HKIIIEGFCSEGKIEEAEGYFNSMKDESVEIYTA----MVSGYCEADLIEKSYELFHELS 568
Query: 567 SEGTKLDE 574
+ G E
Sbjct: 569 NRGDTAQE 576
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 70/371 (18%), Positives = 146/371 (39%), Gaps = 24/371 (6%)
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPD-AHTCSRLVASCVRARKFKIANTLLQVFITDGEIA 185
L + K D + + ED K ++ D H + + C++ + K ++ +
Sbjct: 415 LFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPD 474
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++A+N G + + M S G+ +S + I+E + G E+ F
Sbjct: 475 VVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEAEGYF- 533
Query: 246 ECKSRKLDSTPFSTHMYKILC--DSLGKSGRAFEALKFFRDM-KEKGILEDPS--IYASL 300
S K +S T M C D + KS F L D +E L+ S +Y+ +
Sbjct: 534 --NSMKDESVEIYTAMVSGYCEADLIEKSYELFHELSNRGDTAQESSCLKQLSKVLYSKV 591
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ ++ A LF +G D ++ Y +++ D+ + MK+ +
Sbjct: 592 LAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGI 651
Query: 361 KISDCISCAIVNG----------FSKRRGY-----WAAVKVYEQLISQGCIPGQVTYASI 405
K +++G FS + G + ++ + + P V Y +
Sbjct: 652 KPDVITYTVLLDGKSKQARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSPDVVIYTVL 711
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
I+ + ++ + A ++F E+ ++G + V Y+++ + +G A+ L +M +KG
Sbjct: 712 IDGHIKVDNFEDAIRLFNEVMKRGLEPDNVTYTALFSGLLNSGNSEIAVTLYNEMSSKGM 771
Query: 466 EPNVWIYNSLM 476
P + I ++
Sbjct: 772 TPPLHINQRIL 782
>gi|240255936|ref|NP_193372.6| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|374095491|sp|Q8GWE0.3|PP314_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16390, chloroplastic; AltName: Full=Chloroplastic
RNA-binding protein P67; Flags: Precursor
gi|332658341|gb|AEE83741.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 702
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 163/354 (46%), Gaps = 9/354 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y M+ + K D EK LF E R K D+ F+T + ++G A+++
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTT-----IISCARQNGVPKRAVEW 232
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
F M G D A++I ++ V +A L+ A + D L+ +Y
Sbjct: 233 FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGV 292
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G + L++ E MK +K + I +++ + + W A +Y+ LI+ G P T
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWST 352
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
YA+++ AY R A ++ EM++KG V+ Y+++++M + +A + MK
Sbjct: 353 YAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMK 412
Query: 462 -AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ C+P+ W ++SL+ ++ + + + E +M P T+VI Y +A++
Sbjct: 413 NCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQV 472
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
D V+ +++ G D G ++ V ++ + EE+ KL+ ++ KL +
Sbjct: 473 DDVVRTFDQVLELGITPDDRFCGCLLNVMTQ-TPSEEIGKLIGCVEKAKPKLGQ 525
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 116/253 (45%), Gaps = 38/253 (15%)
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+++E+MK ++ I ++ + F K + + K++++++ +G P T+ +II+
Sbjct: 164 NLLETMKPSREVILYNVTMKV---FRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCA 220
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG----------RIRDAMWLV-- 457
+ + +A + F +M G + V ++M+ YG+ G R R W +
Sbjct: 221 RQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDA 280
Query: 458 -----------------------AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+MKA G +PN+ IYN L+D GRAK Q + ++K+
Sbjct: 281 VTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKD 340
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+ TP+ +Y ++ AY RAR D + Y E + G + + ++ + +
Sbjct: 341 LITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRY 400
Query: 555 IEELVKLLQDMKS 567
++E ++ QDMK+
Sbjct: 401 VDEAFEIFQDMKN 413
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 117/263 (44%), Gaps = 8/263 (3%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK--LDSTPFSTHMYKILC 266
+EKM S G D+ +++AY + G+ + +L+ ++ K +D+ FST L
Sbjct: 233 FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFST-----LI 287
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
G SG L + +MK G+ + IY LI S A+ ++K+ G
Sbjct: 288 RIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFT 347
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+ LV Y + L + MK L ++ + +++ + R A ++
Sbjct: 348 PNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEI 407
Query: 387 YEQLIS-QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++ + + + C P T++S+I Y S+AE ++M++ GF+ + +S++ YG
Sbjct: 408 FQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYG 467
Query: 446 KTGRIRDAMWLVAKMKAKGCEPN 468
K ++ D + ++ G P+
Sbjct: 468 KAKQVDDVVRTFDQVLELGITPD 490
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 35/167 (20%)
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS---------------- 512
V +YN M + ++K+L + EKL+ EM R + PD ++TT+IS
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234
Query: 513 -------------------AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
AY RA DM + Y+ R ID ++ ++
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ + + ++MK+ G K + +Y+ ++++ A QA+ + ++
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 99/239 (41%), Gaps = 10/239 (4%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A Y+ A+ ++R + T LIR S +D +++ E+ K V P+ +R
Sbjct: 262 DMALSLYDRART-EKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 320
Query: 158 LVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM-GGYNKLHMYYSTILVYEKMKSAG 216
L+ S RA++ A + + IT+G + +A+ Y + + +Y +MK G
Sbjct: 321 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLE---CKSRKLDSTPFSTHMYKILCDSLGKSG 273
+ L Y ++ ++ +F + C++ DS FS+ + C SG
Sbjct: 381 LSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYAC-----SG 435
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
R EA M+E G + S+I + +V F + E G+ D C
Sbjct: 436 RVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFC 494
>gi|255661142|gb|ACU25740.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 426
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 160/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 150/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G+ L+ MY+E + L V M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVTPTTASYSTLLTMYVENKKFLEALSVFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALI 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 161/353 (45%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG+ + Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTLLTMYVENKKFLEALSVFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ +A + + GRI +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD +++AY + EFD Y E + G V
Sbjct: 370 KYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 142/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PTTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDIAIHILAGAGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A I+NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANDVYMEMQEVG 420
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/470 (19%), Positives = 193/470 (41%), Gaps = 39/470 (8%)
Query: 150 PDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMY------ 202
PD + C++L+ + C R R A L + + + A+N+ + GY +
Sbjct: 76 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 135
Query: 203 ------------YSTIL--------VYEKMKSAGIVLDSGC------YCQIMEAYYKIGD 236
Y+ I+ V E + +L GC Y ++EA K
Sbjct: 136 IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG 195
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+ + E +++ TP + Y ++ + + + GR +A +F + G D
Sbjct: 196 FGQAMEVLDEMRAKG--CTP-NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y +++ + + EELF E EK + + LV + G+VE+ + V+E M
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ + ++N K+ A + + S GC P ++Y +++ CR +
Sbjct: 313 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 372
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
A+++ EM +K V +++ + + + G I A L+ +M GCE N+ YN+L+
Sbjct: 373 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 432
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+ + +L+ M P+ ++YTT+++ A D + E
Sbjct: 433 NGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCA 489
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ ++V F + ++E ++L++ M G + Y++ ++ + +
Sbjct: 490 PNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITN 539
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 130/271 (47%), Gaps = 3/271 (1%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+T + I+ +++ K GR +A +F +M G D Y +++ + A+EL
Sbjct: 319 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 378
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
KE K + + + ++GL+E+ ++E M +++ A+VNGF +
Sbjct: 379 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 438
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
+A++++ S C P +TY +++ C A ++ EM QK VV +
Sbjct: 439 GRVDSALELF---YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTF 495
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+ +V+ + + G + +A+ LV +M GC PN+ YN+L+D N + +L +
Sbjct: 496 NVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVS 555
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
V+PD V+Y+++I +R + +K ++
Sbjct: 556 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 586
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 134/310 (43%), Gaps = 7/310 (2%)
Query: 277 EALKFFRDMKEKGILEDPSIY--ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
EA + +G E P +Y LI + A + + AE G D
Sbjct: 61 EAARLVDRATSRG--EAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
LV Y G ++ ++ SM A + I+ G R A+ + + ++ +G
Sbjct: 119 LVAGYCRYGQLDAARRLIASMPVAPDAYT---YTPIIRGLCDRGRVGEALSLLDDMLHRG 175
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
C P VTY ++ A C+ + +A +V EM+ KG +V Y+ ++ + GR+ DA
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+ ++ + G +P+ Y +++ AK VE+L+ EM + P++V++ ++ +
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
R + ++ + +G + + I++ K ++++ + L +M S G D
Sbjct: 296 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 355
Query: 575 RLYHSAMNAL 584
Y + + L
Sbjct: 356 ISYTTVLKGL 365
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 161/398 (40%), Gaps = 16/398 (4%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFS--THMYKIL 265
V + +G +D Y ++ Y + G L+ R + S P + + Y +
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQ--------LDAARRLIASMPVAPDAYTYTPI 151
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
L GR EAL DM +G Y L+ + T A E+ E KG
Sbjct: 152 IRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 211
Query: 326 LRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
P + V++ EG V+ + + + + + ++ G + +
Sbjct: 212 --TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDV 269
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+++ +++ + C+P +VT+ ++ +CR + +A +V +M G + ++
Sbjct: 270 EELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINT 329
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K GR+ DA + M + GC P+ Y +++ RA+ ++L KEM R+ P+
Sbjct: 330 ICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 389
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+V++ T I + + + +G ++ +V F +++ ++L
Sbjct: 390 EVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFY 449
Query: 564 DMKSEGTKLD-ERLYHSAMNALR-DAGLQMQAQWLQQN 599
M + + L NA R DA ++ A+ LQ++
Sbjct: 450 SMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 487
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 112/276 (40%), Gaps = 3/276 (1%)
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L A +G D +C KL+ G V+ + + + + +V
Sbjct: 62 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 121
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G+ + AA ++ + S P TY II C +A + +M +G
Sbjct: 122 GYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 178
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
VV Y+ ++ K+ AM ++ +M+AKGC PN+ YN +++ R + +
Sbjct: 179 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+ PD VSYTTV+ A+ ++ + + E + + ++V F +
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 298
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+E +++L+ M G + L + +N + G
Sbjct: 299 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQG 334
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 97/476 (20%), Positives = 179/476 (37%), Gaps = 39/476 (8%)
Query: 59 STNF-PTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEK 117
ST F +E+ + + P+ ++ ++GM ++ + + A ++ N F+P+
Sbjct: 193 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD-AREFLNRLSSY-GFQPDT 250
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
+ +++ L +K+W+ + L + N +P+ T LV R + A +L+
Sbjct: 251 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 310
Query: 178 FITDGEIALLAF-NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
G A N + K M S G D+ Y +++ +
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 370
Query: 237 SEKVAALFLE-----CKSRKLDSTPF--------------------STH-------MYKI 264
E L E C ++ F S H Y
Sbjct: 371 WEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNA 430
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L + GR AL+ F M K + Y +L+ + + A EL E +K
Sbjct: 431 LVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 487
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ LV + ++GL+++ +++VE M + +++G + A+
Sbjct: 488 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEAL 547
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
++ L+S G P VTY+SII R +A K+F +Q G V Y+ ++
Sbjct: 548 ELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLAL 607
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
K A+ A M + GC PN Y +L++ L++ L +E+ R V
Sbjct: 608 CKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 173/392 (44%), Gaps = 13/392 (3%)
Query: 130 SKKWDSIVSLSEDFKIY------NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG- 182
S + + S+ E + Y V P+A + L+ +R+ K A + + G
Sbjct: 86 SDLMNRLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGV 145
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ ++ FN+ M G K + + M AGI D Y ++ K G +
Sbjct: 146 QPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAME 205
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
+F E R L+ +T + L D+ K G L+ +M +G+ D Y +L+
Sbjct: 206 MFEEMCERGLNP---NTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVN 262
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
F + ++K A ++ +E + G+ D L+ +EG ++ +++ + M + + +
Sbjct: 263 GFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVAL 322
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
D A+++G SK A ++ +++ G P TY +I+A+C+ K
Sbjct: 323 DDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHL 382
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA 482
EMQ KG + +V Y+ ++ + G++++A L+ M G PN YN L+D H +
Sbjct: 383 KEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKH 442
Query: 483 KNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+R E+L + + D YT++I+ +
Sbjct: 443 GKVRDTEELKSA---KGMVSDFGVYTSLINEF 471
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
Query: 377 RRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
R G A+ + V+++++ +G P VT+ ++++ C+ + + A + M + G V
Sbjct: 126 RSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVY 185
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y + + KTGRI+DAM + +M +G PN + +L+D H + ++ +L EM
Sbjct: 186 TYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEM 245
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
R V D V+Y +++ + R R+ E R +G D+ ++ K ++
Sbjct: 246 ATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGEL 305
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ +++ Q+M EG LD+ Y + ++ L AG + A+ +
Sbjct: 306 DTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERI 346
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 90/190 (47%)
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G P TY + I C+ A ++F EM ++G + V ++++ + K G +
Sbjct: 179 GIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAG 238
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ L +M +G + ++ YN+L++ R ++++ + +EM + + PDKV+YTT+I
Sbjct: 239 LELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDG 298
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ E D ++ E G +D ++ SK + + ++L +M G + D
Sbjct: 299 CCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPD 358
Query: 574 ERLYHSAMNA 583
Y ++A
Sbjct: 359 NTTYTMVIDA 368
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/325 (18%), Positives = 133/325 (40%)
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
P + +L + +SG+ A F +M +G+ + +L+ +++ A
Sbjct: 109 GVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNA 168
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
L + G+ D + + G ++ +++ E M L + + +++
Sbjct: 169 NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDA 228
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
K A +++ ++ ++G V Y +++N +CR+ A + EM++ G
Sbjct: 229 HCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPD 288
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V Y++++ K G + AM + +M +G + Y +L+ +A E++
Sbjct: 289 KVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILC 348
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
EM + PD +YT VI A+ + + K E + G +++ F L
Sbjct: 349 EMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLG 408
Query: 554 QIEELVKLLQDMKSEGTKLDERLYH 578
Q++ LL M + G ++ Y+
Sbjct: 409 QMKNADMLLNAMLNIGVCPNDITYN 433
>gi|297804554|ref|XP_002870161.1| hypothetical protein ARALYDRAFT_915114 [Arabidopsis lyrata subsp.
lyrata]
gi|297315997|gb|EFH46420.1| hypothetical protein ARALYDRAFT_915114 [Arabidopsis lyrata subsp.
lyrata]
Length = 702
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 160/342 (46%), Gaps = 9/342 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y ++ + K + EK LF E R K D+ F+T + +SG A+++
Sbjct: 178 YNVTLKVFRKSKNLEKSEKLFDEMLERGVKPDNATFTT-----IISCARQSGVPKRAVEW 232
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
F M G D A++I ++ V++A L+ A + D L+ +Y
Sbjct: 233 FEKMSSFGCEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDAVTFSTLIRIYGV 292
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G + L++ E MK +K + I +++ + + W A +++ LIS G P T
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLLDSMGRAKRPWQAKIIHKDLISNGFTPNWST 352
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
YA++I AY R A ++ EM++KG V+ Y+++++M G + +A + MK
Sbjct: 353 YAALIRAYGRARYGDDALVIYREMKEKGLSLTVILYNTLLSMCADIGYVDEAFEIFQDMK 412
Query: 462 -AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ C+P+ W ++SL+ ++ + + + E +M P T+VI Y +A++
Sbjct: 413 NCETCDPDSWTFSSLITVYSCSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQV 472
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D V+ +++ G D G ++ V ++ + EE+ KL+
Sbjct: 473 DDVVRTFDQVLELGITPDDRFCGCLLNVMTQ-TPSEEIGKLI 513
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 108/202 (53%), Gaps = 5/202 (2%)
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
ISCA +G KR AV+ +E++ S GC P VT A++I+AY R A ++
Sbjct: 217 ISCARQSGVPKR-----AVEWFEKMSSFGCEPDNVTLAAMIDAYGRAGNVEMALSLYDRA 271
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+ + + V +S+++ +YG +G + + +MKA G +PN+ IYN L+D GRAK
Sbjct: 272 RTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLLDSMGRAKRP 331
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
Q + + K++ TP+ +Y +I AY RAR D + Y E + G + + +
Sbjct: 332 WQAKIIHKDLISNGFTPNWSTYAALIRAYGRARYGDDALVIYREMKEKGLSLTVILYNTL 391
Query: 546 VGVFSKLSQIEELVKLLQDMKS 567
+ + + + ++E ++ QDMK+
Sbjct: 392 LSMCADIGYVDEAFEIFQDMKN 413
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 119/292 (40%), Gaps = 66/292 (22%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK--LDSTPFSTH------ 260
+EKM S G D+ +++AY + G+ E +L+ ++ K +D+ FST
Sbjct: 233 FEKMSSFGCEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDAVTFSTLIRIYGV 292
Query: 261 ------------------------MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+Y L DS+G++ R ++A +D+ G + S
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLLDSMGRAKRPWQAKIIHKDLISNGFTPNWST 352
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
YA+LI ++ A +++E +EKG+ + L+ M + G V++ ++ + MK
Sbjct: 353 YAALIRAYGRARYGDDALVIYREMKEKGLSLTVILYNTLLSMCADIGYVDEAFEIFQDMK 412
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
N + C P T++S+I Y S
Sbjct: 413 NC----------------------------------ETCDPDSWTFSSLITVYSCSGRVS 438
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+AE ++M++ GF+ + +S++ YGK ++ D + ++ G P+
Sbjct: 439 EAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 10/239 (4%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
E+A Y+ A+ ++R + T LIR S +D +++ E+ K V P+ +R
Sbjct: 262 EMALSLYDRART-EKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 320
Query: 158 LVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM-GGYNKLHMYYSTILVYEKMKSAG 216
L+ S RA++ A + + I++G + +A+ Y + +++Y +MK G
Sbjct: 321 LLDSMGRAKRPWQAKIIHKDLISNGFTPNWSTYAALIRAYGRARYGDDALVIYREMKEKG 380
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLE---CKSRKLDSTPFSTHMYKILCDSLGKSG 273
+ L Y ++ IG ++ +F + C++ DS FS+ + C SG
Sbjct: 381 LSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYSC-----SG 435
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
R EA M+E G + S+I + +V F + E G+ D C
Sbjct: 436 RVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFC 494
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 35/167 (20%)
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS---------------- 512
V +YN + + ++KNL + EKL+ EM R V PD ++TT+IS
Sbjct: 175 VILYNVTLKVFRKSKNLEKSEKLFDEMLERGVKPDNATFTTIISCARQSGVPKRAVEWFE 234
Query: 513 -------------------AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
AY RA +M + Y+ R ID ++ ++
Sbjct: 235 KMSSFGCEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ + + ++MK+ G K + +Y+ ++++ A QA+ + ++
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLLDSMGRAKRPWQAKIIHKDL 341
>gi|255661180|gb|ACU25759.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 426
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 161/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
++ G + D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKKSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFAEMREIKCFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 154/363 (42%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K+ G + D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGFMPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G++ + L+ MY+E + L V M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCFL-DLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIYLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 190/425 (44%), Gaps = 12/425 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T LI + + +D+ +S + + V D S L+ + + A ++
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G + L+A+N+ + + K ++ + +M++AG++ ++ Y ++ Y +
Sbjct: 67 FSRLKKSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVE 126
Query: 234 IGDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ ++F E + K LD T + I+ D G+ G A EA K F M++ GI
Sbjct: 127 NKKFLEALSVFAEMREIKCFLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y +L+ + A LF+ + K + ++ ++++Y + EK ++
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++ M+N ++ + I++ + K A ++++L S G QV Y ++I AY R
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYER 301
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
L + A+++ E+++ +A + + GRI +A W+ + G ++ +
Sbjct: 302 AGLVAHAKRLLHELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+ ++ + + K V +++ +M PD V++AY + EFD Y E +
Sbjct: 358 FERMIYLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQ 417
Query: 532 MNGGV 536
G V
Sbjct: 418 EVGCV 422
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 103/212 (48%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM V P+ SY+T+++ Y
Sbjct: 67 FSRLKKSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R +D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSVFAEMREIKCFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 144/355 (40%), Gaps = 47/355 (13%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA- 171
F P+ +I ++K + SL + + V+P+ + S L+ V +KF A
Sbjct: 75 FMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEAL 134
Query: 172 ------------------NTLLQVFITDG-----------------EIALLAFNSAMGGY 196
N ++ V+ G E ++++N+ + Y
Sbjct: 135 SVFAEMREIKCFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
++ I ++ M+ I + Y +M Y K + EK L E ++R ++
Sbjct: 195 GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNS 254
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y + GK G+ A F+ ++ G+ D +Y ++I ++ V A+ L
Sbjct: 255 IT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E L+ P+ + + ++I G +E+ V +A + ++ F
Sbjct: 312 LHE------LKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIYLF 365
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
SK + Y V+V++++ G P A ++NAY ++ + KA V++EMQ+ G
Sbjct: 366 SKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIYLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/503 (21%), Positives = 211/503 (41%), Gaps = 72/503 (14%)
Query: 149 LPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTIL 207
+P T + ++ + V+ A L ++DG + ++A S + G+ K + S ++
Sbjct: 301 VPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALV 360
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL-- 265
+++KM+ G +S + ++E + K G+ EK AL K L TP H++ I+
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEK--ALEFYKKMEVLGLTPSVFHVHTIIQG 418
Query: 266 ---------------------------CDS----LGKSGRAFEALKFFRDMKEKGILEDP 294
C++ L K G+ EA + M+ +GI +
Sbjct: 419 WLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNV 478
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
Y +++ + LA +F EKG+ + L+ + L+VV
Sbjct: 479 VSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNH 538
Query: 355 MKNAKLKISD--------------------------------CISC----AIVNGFSKRR 378
M ++ ++++ C+SC +I++GF K
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEG 598
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+AV YE++ G P +TY S++N C+ +A ++ EM+ KG + AY
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 658
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ + K + A L +++ +G P+ IYNSL+ N+ L+K+M +
Sbjct: 659 ALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD 718
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ D +YTT+I + + + Y E + G V D I ++V SK Q ++
Sbjct: 719 GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKV 778
Query: 559 VKLLQDMKSEGTKLDERLYHSAM 581
VK+ ++MK + +Y++ +
Sbjct: 779 VKMFEEMKKNNVTPNVLIYNAVI 801
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/474 (20%), Positives = 216/474 (45%), Gaps = 14/474 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P++ F + K+ + ++ A ++Y + + L P + +I+ ++ +K + +
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEK-ALEFYKKMEVLG-LTPSVFHVHTIIQGWLKGQKHEEAL 429
Query: 138 SL-SEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
L E F+ L + C+ +++ + K A LL + G ++++N+ M G
Sbjct: 430 KLFDESFETG--LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLG 487
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ + +V+ + G+ ++ Y +++ ++ D + + S ++
Sbjct: 488 HCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE-- 545
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDM-KEKGILEDPSIYASLICSFASITEVKLAE 314
+ +Y+ + + L K G+ +A + +M +EK + Y S+I F E+ A
Sbjct: 546 -VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAV 604
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
++E G+ P V LM + +++ L++ + MKN +K+ A+++
Sbjct: 605 AAYEEMCGNGI--SPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALID 662
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
GF KR +A ++ +L+ +G P Q Y S+I+ + + A ++ +M + G
Sbjct: 663 GFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRC 722
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+ Y++++ K G + A L +M+A G P+ IY +++ + +V K++
Sbjct: 723 DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMF 782
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+EM++ VTP+ + Y VI+ + R D + ++E G + D A I+V
Sbjct: 783 EEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 203/448 (45%), Gaps = 19/448 (4%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQ------VFITDGEIALLAFNSAMGGYNKLHMYY 203
PD+ S V +C + +AN+LL+ + + E + S + K
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQE----TYTSVILASVKQGNMD 321
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYK 263
I + ++M S GI ++ ++ + K +++ V+AL L K K +P S +
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCK--NNDLVSALVLFDKMEKEGPSPNSV-TFS 378
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA--SLICSFASITEVKLAEELFKEAE 321
+L + K+G +AL+F++ M+ G+ PS++ ++I + + + A +LF E+
Sbjct: 379 VLIEWFRKNGEMEKALEFYKKMEVLGL--TPSVFHVHTIIQGWLKGQKHEEALKLFDESF 436
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E G L + VC ++ ++G ++ +++ M++ + + ++ G +++
Sbjct: 437 ETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMD 495
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A V+ ++ +G P TY+ +I+ R A +V M + V Y +++
Sbjct: 496 LARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTII 555
Query: 442 AMYGKTGRIRDAMWLVAKM-KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
K G+ A L+A M + K + YNS++D + + ++EM +
Sbjct: 556 NGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI 615
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
+P+ ++YT++++ + D ++ +E + G +D G ++ F K S +E
Sbjct: 616 SPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASA 675
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAG 588
L ++ EG + +Y+S ++ R+ G
Sbjct: 676 LFSELLEEGLNPSQPIYNSLISGFRNLG 703
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 152/366 (41%), Gaps = 40/366 (10%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKL-HMYYSTIL 207
P+ +T S L+ C R + A ++ + E+ + + + + G K+ + L
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 570
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ ++ + + Y I++ ++K G+ + A + E + + Y L +
Sbjct: 571 LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVIT---YTSLMN 627
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L K+ R +AL+ +MK KG+ D Y +LI F + ++ A LF E E+G
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG--- 684
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
L S I ++++GF AA+ +Y
Sbjct: 685 --------------------------------LNPSQPIYNSLISGFRNLGNMVAALDLY 712
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
++++ G TY ++I+ + A +++ EMQ G + Y+ +V K
Sbjct: 713 KKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKK 772
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G+ + + +MK PNV IYN+++ H R NL + +L EM + + PD ++
Sbjct: 773 GQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Query: 508 TTVISA 513
++S
Sbjct: 833 DILVSG 838
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 197/471 (41%), Gaps = 31/471 (6%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P +++ L LK+ + ++A + P T ++I L + +
Sbjct: 202 PSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAA 261
Query: 138 SLSEDFKI--------YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAF 189
L E ++ YN L L CV+ K+ + L++ ++ +
Sbjct: 262 ELVEGMRLSKKASSFTYNPL----ITGLLARGCVK----KVYDLQLEMENEGIMPTVVTY 313
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
N+ + G + + + + + +M++ G++ D Y ++ Y K G+ ++ LF + +
Sbjct: 314 NAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRR 373
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
L T + Y I D + G EA +M E+G L + Y L+ ++
Sbjct: 374 AGLAPTVLT---YNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCS 430
Query: 310 VKLAEELFKEAEEKGMLRD-----PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ +A E F E KG+ D +C +L+L I L + + ++E + SD
Sbjct: 431 LAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGIS------SD 484
Query: 365 CISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
++ I ++G K A ++ +++S G P +TY +I+A+C L +A K+F
Sbjct: 485 TVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFN 544
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M G V ++ ++ Y + G + A KM +G EPN YN L+ R
Sbjct: 545 NMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMG 604
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+ + EM R + +K +YT +I + ++ ++FY E NG
Sbjct: 605 RTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNG 655
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 147/345 (42%), Gaps = 11/345 (3%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKG--ILEDPSIYASLICSFASITEVKLAEELFK- 318
Y L DS K GR + ++M+ +G L + Y +I +++ A EL +
Sbjct: 207 YNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEG 266
Query: 319 ---EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ +P L+ + G V+K D+ M+N + + A+++G
Sbjct: 267 MRLSKKASSFTYNP-----LITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLL 321
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ AA + ++ + G +P +TY S++N YC+ +A +F ++++ G V+
Sbjct: 322 QSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVL 381
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+ + Y + G + +A L +M +GC PNV Y LM +L + + EM
Sbjct: 382 TYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEM 441
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + PD +Y T I A + ++ + G D I++ K +
Sbjct: 442 LSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNL 501
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
++ +L M S G + D Y ++A + GL +A+ + N
Sbjct: 502 KDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNM 546
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 146/363 (40%), Gaps = 4/363 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +I L+QS ++ + + +LPD T + L+ +A K A L
Sbjct: 308 PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLL 367
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G +L +N + GY +L ++ E+M G + + Y +M+
Sbjct: 368 FGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLN 427
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ F E S+ L F+ + LG RA E + + +GI D
Sbjct: 428 VCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREV---LMLEGISSD 484
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y LI +K A+EL + G+ D L+ + E GL+ + +
Sbjct: 485 TVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFN 544
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+M + L S I++ + +R ++A + +++ +G P ++TY +I+A CR+
Sbjct: 545 NMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMG 604
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
A F EM ++G Y+ ++ K G DAM +M G P+ +
Sbjct: 605 RTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHK 664
Query: 474 SLM 476
+L+
Sbjct: 665 ALV 667
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/221 (19%), Positives = 91/221 (41%), Gaps = 38/221 (17%)
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV---VAYSSMVA 442
V+E+++ G P VTY ++++++ + K + EM+ +G C+ V Y+ ++
Sbjct: 191 VHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRG-SGCLPNDVTYNVVIT 249
Query: 443 MYGKTGRIRDAMWLVAKMK------------------AKGC----------------EPN 468
+ G + +A LV M+ A+GC P
Sbjct: 250 GLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPT 309
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
V YN+++ ++ + + + EM + PD ++Y ++++ Y +A + +
Sbjct: 310 VVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFG 369
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ R G I + + +L +EE L ++M +G
Sbjct: 370 DLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQG 410
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 3/175 (1%)
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F EM G V + ++ R D + +M G EP++ YN+L+D +
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLK 216
Query: 482 AKNLRQVEKLWKEMERR--KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+V L KEME R P+ V+Y VI+ R + + + R++
Sbjct: 217 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSF 276
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
++ G+ ++ ++++ L +M++EG Y++ ++ L +GL AQ
Sbjct: 277 TYNPLITGLLAR-GCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQ 330
>gi|224141335|ref|XP_002324029.1| predicted protein [Populus trichocarpa]
gi|222867031|gb|EEF04162.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 181/396 (45%), Gaps = 43/396 (10%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++++M++ + D Y ++ + K G + A+LF + + D +Y L +
Sbjct: 129 LFDEMRNRALAPDRYTYSTLITHFGKAGMFD--ASLFW-LQQMEQDRVSGDLVLYSNLIE 185
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
K +A+ F +K GI+ D Y S+I F + A+ L KE E G++
Sbjct: 186 LSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMP 245
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ +Y+E + L V M AK + D +C +
Sbjct: 246 DTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPL-DLTTCNV----------------- 287
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+I+ Y ++ + +A+++F M++ G + VV+Y++++ +YG+T
Sbjct: 288 -----------------MIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGET 330
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
+A+ L M+ K E NV YN+++ ++G++ + L +EM+ R + P+ ++Y
Sbjct: 331 ELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITY 390
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+T+IS + +A + D + + R +G ID+ + M+ + + + +LL ++K
Sbjct: 391 STIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELKH 450
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQAQWL-QQNFEG 602
+ E +A+ L AG +A W+ +Q F+
Sbjct: 451 PDSIPRE----TAIKILARAGRIEEATWVFRQAFDA 482
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 143/320 (44%), Gaps = 37/320 (11%)
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A LF E + + D L+ + + G+ + +L ++ M+ ++ + ++
Sbjct: 126 AHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFWLQQMEQDRVSGDLVLYSNLIE 185
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
K Y A+ ++ +L G +P V Y S+IN + + L+ +A+ + EM++ G
Sbjct: 186 LSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMP 245
Query: 433 CVVAYSS-----------------------------------MVAMYGKTGRIRDAMWLV 457
V+YS+ M+ +YG+ ++A L
Sbjct: 246 DTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLF 305
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
M+ G EPNV YN+L+ ++G + + L++ M+++ + + V+Y T+I Y ++
Sbjct: 306 WSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKS 365
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
E + E + N G+ AI ++ ++ K +++ L Q ++S G ++D+ L
Sbjct: 366 LEHEKATNLMQEMQ-NRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVL 424
Query: 577 YHSAMNALRDAGLQMQAQWL 596
Y + + A +GL A+ L
Sbjct: 425 YQTMIVAYERSGLVAHAKRL 444
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 94/537 (17%), Positives = 225/537 (41%), Gaps = 75/537 (13%)
Query: 102 DYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS 161
D+ N+ + + P +++R ++++K+WD L ++ + + PD +T S L+
Sbjct: 95 DWIND---IARYSPSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITH 151
Query: 162 CVRARKFKIANTLLQVFITD---GEIAL-------------------------------- 186
+A F + LQ D G++ L
Sbjct: 152 FGKAGMFDASLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPD 211
Query: 187 -LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+A+NS + + K ++ L+ ++M+ G++ D+ Y ++ Y + + ++F
Sbjct: 212 LVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFA 271
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E K P ++ D G+ A EA + F M++ GI + Y +L+ +
Sbjct: 272 EMNEAK---CPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYG 328
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
A LF+ ++K + ++ ++ +Y + EK ++++ M+N ++ +
Sbjct: 329 ETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAI 388
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
I++ + K A ++++L S G QV Y ++I AY R L + A+++ E+
Sbjct: 389 TYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHEL 448
Query: 426 Q---------------------------QKGFD----KCVVAYSSMVAMYGKTGRIRDAM 454
+ ++ FD K + + MV ++ + + + +
Sbjct: 449 KHPDSIPRETAIKILARAGRIEEATWVFRQAFDAGEVKDISVFGCMVDLFSRNRKPANVI 508
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK-VTPDKVSYTTVISA 513
+ KM+ G P+ + +++ +G+ + + L+KEM+ + V PD+V + ++S
Sbjct: 509 EVFEKMRGAGYFPDSNVIALVLNAYGKLHEFEKADALYKEMQEEECVFPDEVHF-QMLSL 567
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
Y ++F M + + + + + ++ ++ + +++ + +++ M G
Sbjct: 568 YGARKDFMMIEALFERLDSDPNINKKELHLVVASIYERKNRLNDASRIMNRMSKGGV 624
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/177 (18%), Positives = 80/177 (45%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P Y ++ R + A +F EM+ + YS+++ +GK G +++
Sbjct: 105 PSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFW 164
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ +M+ ++ +Y++L+++ + + + ++ ++R + PD V+Y ++I+ + +
Sbjct: 165 LQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGK 224
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
A+ F E R G + D ++ V+ + + E + + +M LD
Sbjct: 225 AKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLD 281
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%)
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+V+ YN ++ RAK L+ EM R + PD+ +Y+T+I+ + +A FD + +
Sbjct: 105 PSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFW 164
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ + D + ++ + KL + + + +K G D Y+S +N
Sbjct: 165 LQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGK 224
Query: 587 AGLQMQAQWLQQ 598
A L +A+ L +
Sbjct: 225 AKLFREAKLLMK 236
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 165/371 (44%), Gaps = 7/371 (1%)
Query: 141 EDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKL 199
ED K + D +T + ++ + R K A L IT+G + ++ +N+ M K
Sbjct: 259 EDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKG 318
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
M I V+ +M G + Y ++ G ++ + +E R + +
Sbjct: 319 KMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGV-VEISKRYM-----TQ 372
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+Y L +L K G EA + F DM + + Y S++ S + A E+ +
Sbjct: 373 GIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSK 432
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
EKG++ D + + + + D+ E MK ++ F +
Sbjct: 433 IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGE 492
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A+ ++E+L C P ++Y S+IN + +A F EMQ+KG + VV YS+
Sbjct: 493 VDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYST 552
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +GKT R+ A L +M KGC+PN+ YN L+D + + L+ +M+++
Sbjct: 553 LMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQG 612
Query: 500 VTPDKVSYTTV 510
+TPD ++YT +
Sbjct: 613 LTPDSITYTVL 623
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 178/406 (43%), Gaps = 46/406 (11%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY +++ G LD Y +++A K EK +F + K R ++ Y I+
Sbjct: 225 VYCEIRRGGHKLDIFAYNMLLDALAK---DEKACQVFEDMKKRHCRRDEYT---YTIMIR 278
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
++G+ G+ EA+ F +M +G+ + Y +L+ A V A ++F E G R
Sbjct: 279 TMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETG-CR 337
Query: 328 DPEVCLKLVL-MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK---------- 376
E L+L + + EG + + VVE +K ++ I +V SK
Sbjct: 338 PNEYTYSLLLNLLVAEGQLVRLDGVVEI---SKRYMTQGIYSYLVRTLSKLGHVSEAHRL 394
Query: 377 ------------RRGYWA-------------AVKVYEQLISQGCIPGQVTYASIINAYCR 411
R Y + A+++ ++ +G + + Y ++ +A +
Sbjct: 395 FCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGK 454
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ S +F +M++ G + Y+ ++A +G+ G + +A+ + +++ C+P++
Sbjct: 455 LKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIIS 514
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
YNSL++ G+ ++ + +KEM+ + + PD V+Y+T++ + + +M + E
Sbjct: 515 YNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEML 574
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ G + I++ K + E V L MK +G D Y
Sbjct: 575 VKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITY 620
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 204/466 (43%), Gaps = 56/466 (12%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
+FR E +KLL R ++ K++ + E PD C++L+ + + A
Sbjct: 65 DFR-ETHLMKLLNRS-CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKA 122
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ ++++ + E + A+N+ + G+ K++ + V +MK+ G + D Y ++ +
Sbjct: 123 SRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSL 182
Query: 232 ---YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
K+G + KV L LD+ + Y IL ++ G EA+K +M +
Sbjct: 183 CNRRKLGLALKVLDQLL------LDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLAR 236
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G+L D Y ++I +GM + EG+VE+
Sbjct: 237 GLLPDMYTYNAII---------------------RGMCK--------------EGMVERA 261
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIIN 407
+++ S+ + K D IS I+ +G W K+ ++ S+GC P +VTY+ +I+
Sbjct: 262 AELITSLTSKGCK-PDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILIS 320
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+ CR +A V M +K +Y +++ K GR+ A+ ++ M + GC P
Sbjct: 321 SLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLP 380
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY----NRAREFDMC 523
++ YN+++ + N Q +++ ++ P+ SY T+ISA +R+R M
Sbjct: 381 DIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMV 440
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
++ G D ++ + +EE + LL DM+ G
Sbjct: 441 PAMISK----GVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 482
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 165/360 (45%), Gaps = 23/360 (6%)
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE---DPSIYA-- 298
FLEC K TP ILC L K F+ ++ + E ILE +P ++A
Sbjct: 90 FLECLVNK-GYTP-----DVILCTKLIKGFFNFKNIEKASRVME--ILESHTEPDVFAYN 141
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDP---EVCLKLVLMYIEEGLVEKTLD--VVE 353
++I F + ++ A ++ + +G L D + + + + GL K LD +++
Sbjct: 142 AVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLD 201
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+ + + I IV G G A+K+ E+++++G +P TY +II C+
Sbjct: 202 NCMPTVITYTILIEATIVEG-----GINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEG 256
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ +A ++ + KG V++Y+ ++ + G+ + LVA+M ++GCEPN Y+
Sbjct: 257 MVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYS 316
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
L+ R + + + K M +++TPD SY +ISA + D+ + + N
Sbjct: 317 ILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN 376
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G + D ++ K + +++ ++ G + Y++ ++AL G + +A
Sbjct: 377 GCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRA 436
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 179/432 (41%), Gaps = 9/432 (2%)
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
+SH + PD +++ + G K + E A N K F P+ T ++I L
Sbjct: 130 ESHTE---PDVFAYNAVISGFCKVNRI-EAATQVLNRMKAR-GFLPDIVTYNIMIGSLCN 184
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLA 188
+K + + + + N +P T + L+ + + A LL+ + G + +
Sbjct: 185 RRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYT 244
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N+ + G K M + + S G D Y ++ A+ G ++ L E
Sbjct: 245 YNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMF 304
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
SR + + Y IL SL + GR EA+ + M EK + D Y LI +
Sbjct: 305 SRGCEPNKVT---YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 361
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ LA + G L D ++ + G + L++ ++ +
Sbjct: 362 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYN 421
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++ A+ + +IS+G P ++TY S+I+ CR L +A + +M+Q
Sbjct: 422 TMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQS 481
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
GF V++Y+ ++ K RI DA+ + A+M KGC PN Y L++ G A +
Sbjct: 482 GFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEA 541
Query: 489 EKLWKEMERRKV 500
+L + R V
Sbjct: 542 MELANSLFSRDV 553
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 147/347 (42%), Gaps = 14/347 (4%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y + K R A + MK +G L D Y +I S + ++ LA ++ +
Sbjct: 140 YNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQ-- 197
Query: 322 EKGMLRDPEVCLKLVLMY-------IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
+L D C+ V+ Y I EG + + + ++E M L AI+ G
Sbjct: 198 ---LLLDN--CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A ++ L S+GC P ++Y ++ A+ + + EK+ EM +G +
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V YS +++ + GRI +A+ ++ M K P+ + Y+ L+ + L +
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M PD V+Y T+++A + + ++ +N+ R G + + M+
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 432
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ ++ M S+G DE Y+S ++ L GL +A L + E
Sbjct: 433 RSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDME 479
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 155/373 (41%), Gaps = 18/373 (4%)
Query: 149 LPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-------LLAFNSAMGGYNKLHM 201
LPD T + ++ S RK +A +L + D + L+ GG N+
Sbjct: 169 LPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINE--- 225
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
+ + E+M + G++ D Y I+ K G E+ A L S+ S
Sbjct: 226 ---AMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVIS--- 279
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y IL + G+ E K +M +G + Y+ LI S + A + K
Sbjct: 280 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 339
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGY 380
EK + D L+ +EG ++ + +++ M + + D ++ I+ K
Sbjct: 340 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC-LPDIVNYNTILAALCKNGNA 398
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A++++ +L GC P +Y ++I+A S+A + M KG D + Y+S+
Sbjct: 399 NQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSL 458
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
++ + G + +A+ L+ M+ G P V YN ++ + + + ++ EM +
Sbjct: 459 ISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGC 518
Query: 501 TPDKVSYTTVISA 513
P++ +Y +I
Sbjct: 519 RPNETTYILLIEG 531
>gi|15225790|ref|NP_180247.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100043|sp|O81028.1|PP171_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g26790, mitochondrial; Flags: Precursor
gi|3426046|gb|AAC32245.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330252793|gb|AEC07887.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 799
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 161/386 (41%), Gaps = 46/386 (11%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ +N A +KL + ++MK GIV D Y +++ Y G L E
Sbjct: 389 VCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDE 448
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+ + Y +L L ++G E L+ + MK +G + + +I
Sbjct: 449 MIGNGMSPDLIT---YNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCF 505
Query: 307 ITEVKLAEELFKEAEEK---------------GM----------LRDP---EVCLKLVLM 338
+VK AE+ F E+K G+ L P V +KL
Sbjct: 506 ARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFS 565
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
EG +EK DV++ M +++ + ++ F K A +++ ++ +G IP
Sbjct: 566 LCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPD 625
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY-------------- 444
TY +I+ YCR+ KAE +F +M+Q+G VV Y+ ++ Y
Sbjct: 626 LFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQ 685
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
G+ G+ R A ++ + A G +V Y L+D + NL Q +L+ M + PD
Sbjct: 686 GEVGK-RKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDM 744
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEF 530
V+YTT+IS+Y R DM V E
Sbjct: 745 VAYTTLISSYFRKGYIDMAVTLVTEL 770
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 154/339 (45%), Gaps = 15/339 (4%)
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
M + K+ M + +++++K G+ + Y +++A + G+ E+ A L +E +S
Sbjct: 191 MTEFGKIGMLMT---LFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENES--- 244
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL---ICSFASITE 309
YK + L +G +A+ ++ ++ L + A L + F + +
Sbjct: 245 ------VFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMK 298
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA 369
+K AE + E EE G D CL ++ Y + + + L ++ M LK++ I
Sbjct: 299 MKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSL 358
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
I+ + K A++ +++ +V Y +A ++ +A ++ EM+ +G
Sbjct: 359 ILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRG 418
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
V+ Y++++ Y G++ DA+ L+ +M G P++ YN L+ R + +V
Sbjct: 419 IVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVL 478
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
++++ M+ P+ V+ + +I AR+ F++
Sbjct: 479 EIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFS 517
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 121/291 (41%), Gaps = 7/291 (2%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y + D+L K GR EA + ++MK++GI+ D Y +LI + +V A +L E
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
GM D LV G E+ L++ E MK K + + I+ G R
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A + L Q C + AS + YC L KA K F+ ++ K V Y +
Sbjct: 511 EAEDFFSSL-EQKCPENK---ASFVKGYCEAGLSKKAYKAFVRLEYP-LRKSV--YIKLF 563
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
G + A ++ KM A EP + ++ + N+R+ + L+ M R +
Sbjct: 564 FSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLI 623
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
PD +YT +I Y R E + + + G D +++ + KL
Sbjct: 624 PDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKL 674
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 38/239 (15%)
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPG---QVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+NG AV + +LI + + G + ++ +C AE V IEM++
Sbjct: 252 INGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEE 311
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI---------------- 471
GF V A +++ Y K + +A+ + KM KG + N I
Sbjct: 312 IGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLE 371
Query: 472 -------------------YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
YN D + + + +L +EM+ R + PD ++YTT+I
Sbjct: 372 ALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLID 431
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
Y + + +E NG D ++V ++ EE++++ + MK+EG K
Sbjct: 432 GYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPK 490
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 89/187 (47%), Gaps = 22/187 (11%)
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
EA F M E+G++ D Y +I ++ + E++ AE LF++ +++G+ P+V V
Sbjct: 609 EAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGI--KPDVVTYTV 666
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
L LD + KL +C++ KR+ A +V + + G
Sbjct: 667 L-----------LD-----RYLKLDPEHHETCSVQGEVGKRK----ASEVLREFSAAGIG 706
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
V Y +I+ C++ +A ++F M G + +VAY+++++ Y + G I A+ L
Sbjct: 707 LDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTL 766
Query: 457 VAKMKAK 463
V ++ K
Sbjct: 767 VTELSKK 773
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 147/357 (41%), Gaps = 68/357 (19%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFAS---------------------ITEVKLAEEL 316
AL F R +KE G+ + + YA+L+ + T + L E +
Sbjct: 73 ALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLIEVI 132
Query: 317 FKEAEEKG----MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA-IV 371
++AEEK ++R V LV Y+ G+ ++ DV+ K + D +C ++
Sbjct: 133 GEQAEEKKRSFVLIR---VSGALVKAYVSLGMFDEATDVLFQSKRLDC-VVDIKACNFLM 188
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ---- 427
N ++ + +++QL G + TYA ++ A CR +A + IE +
Sbjct: 189 NRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFGY 248
Query: 428 KGF---------------------DKCVVAYSSMVAMYGKTGR-------IRDAMWLVAK 459
K F D+ +A + A+ G R ++ A ++ +
Sbjct: 249 KTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIE 308
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M+ G +V+ +++D + + NL + +M + + + V + ++ Y +
Sbjct: 309 MEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCK--- 365
Query: 520 FDMCVKF---YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
DMC++ + EFR +DR + SKL ++EE +LLQ+MK G D
Sbjct: 366 MDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPD 422
>gi|255661158|gb|ACU25748.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 426
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 160/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 151/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G+ + L+ MY+E + L V M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 162/353 (45%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG+ ++ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ +A + + GRI +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + EFD Y E + G V
Sbjct: 370 KYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 142/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDIAIHILAGAGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A ++NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANDVYMEMQEVG 420
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|357487731|ref|XP_003614153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515488|gb|AES97111.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 691
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 170/389 (43%), Gaps = 44/389 (11%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME-AYYKIGDSEKVAALFLEC 247
+N+A+ G Y VYE M++ G++ D C IM K+G S K A F E
Sbjct: 251 YNAAISGLLYDGRYKDAWKVYESMETDGVLPDH-VTCSIMIIGMRKLGHSAKDAWQFFEK 309
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
++K + + L S G EAL +M++KGI + +Y +L+ ++
Sbjct: 310 MNQK--GVRWGKEAFGALIKSFCVEGLLSEALIIQSEMEKKGISSNAIVYNTLMDAYCKS 367
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY-----IEEGLVEKTL------------- 349
V+ AE LF E + KG+ P +LMY ++ +VE L
Sbjct: 368 NRVEEAEGLFVEMKAKGI--KPTAVTFNILMYAYSRRMQPKIVESLLAEMKDFGLKPNAN 425
Query: 350 --------------------DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
D MK +K + A+++ +S + A V+E
Sbjct: 426 SYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYSVSGWHEKAYAVFEN 485
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+I +G P TY ++++A+ R+ K++ M + V ++ +V + K G
Sbjct: 486 MIREGIKPSIETYTTLLDAFRRVGDTETLMKIWKLMMSEKVKGTQVTFNILVDGFAKQGL 545
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+A ++++ G +P V YN L++ + R + +L KEME ++ PD ++Y+T
Sbjct: 546 FMEARDVISEFGKIGLQPTVMTYNMLINAYARGGLDSNIPQLLKEMEALRLRPDSITYST 605
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVID 538
VI A+ R R+F ++ E +G V+D
Sbjct: 606 VIYAFVRVRDFKRAFFYHKEMVKSGYVMD 634
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 151/352 (42%), Gaps = 39/352 (11%)
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
V L+L R + + + +Y L LG++ + + FR++ + +Y +
Sbjct: 194 VCCLYLFQWMRSQEPSLVTPKVYTTLFPLLGRARMGDKLMVLFRNLPSSKEFRNVRVYNA 253
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
I K A ++++ E G+L
Sbjct: 254 AISGLLYDGRYKDAWKVYESMETDGVL--------------------------------- 280
Query: 360 LKISDCISCAIVNGFSKRRGYWA--AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
D ++C+I+ ++ G+ A A + +E++ +G G+ + ++I ++C L S+
Sbjct: 281 ---PDHVTCSIMIIGMRKLGHSAKDAWQFFEKMNQKGVRWGKEAFGALIKSFCVEGLLSE 337
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A + EM++KG + Y++++ Y K+ R+ +A L +MKAKG +P +N LM
Sbjct: 338 ALIIQSEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLFVEMKAKGIKPTAVTFNILMY 397
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF-DMCVKFYNEFRMNGGV 536
+ R + VE L EM+ + P+ SYT +ISAY R ++ DM + + + G
Sbjct: 398 AYSRRMQPKIVESLLAEMKDFGLKPNANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIK 457
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
M+ +S E+ + ++M EG K Y + ++A R G
Sbjct: 458 PTSHSYTAMIHAYSVSGWHEKAYAVFENMIREGIKPSIETYTTLLDAFRRVG 509
>gi|255661134|gb|ACU25736.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
gi|255661138|gb|ACU25738.1| pentatricopeptide repeat-containing protein [Verbena halei]
gi|255661140|gb|ACU25739.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 426
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 160/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 151/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G+ + L+ MY+E + L V M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALI 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 162/353 (45%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG+ ++ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ +A + + GRI +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD +++AY + EFD Y E + G V
Sbjct: 370 KYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 142/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDIAIHILAGAGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A I+NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANDVYMEMQEVG 420
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 938
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/525 (21%), Positives = 226/525 (43%), Gaps = 17/525 (3%)
Query: 77 VPDAKKFDSFLHGMLK--DPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
VP+ + + + G+ K D + E E +P T +I V+ +
Sbjct: 361 VPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNV----VTYSSMINGYVKKGMLE 416
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQ----VFITDGEIALLAFN 190
VSL + NV+P+ T ++ +A K ++A L + + + + L A
Sbjct: 417 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV 476
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ + ++ + + M S G+ LD Y +++ ++K GD E A E + R
Sbjct: 477 NHLKRIGRIKEVKGLV---KDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQER 533
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ P+ Y +L + K G+ A ++ M+EKGI D + + ++ S +
Sbjct: 534 GM---PWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDS 589
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
+ +L+ + + G+ C +V M E G +E+ + ++ M ++ +
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 649
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++ SK + A K +E L+S G + Y ++I C++ + KA V +M+ +GF
Sbjct: 650 LDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 709
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
V ++S++ Y +R A+ + M G PNV YN+++ A +++V+K
Sbjct: 710 IPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDK 769
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
EM+ R + PD +Y +IS + + Y E +G V + +++ F+
Sbjct: 770 WLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFA 829
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
+ ++ + +LL++M G + Y + ++ L +W
Sbjct: 830 NVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEW 874
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/469 (22%), Positives = 204/469 (43%), Gaps = 45/469 (9%)
Query: 153 HTCSRLVASCVRARKFKIANTLLQV----FITDGEIALLAFNSAMGGYNKLHMYYSTI-L 207
HT RL SC R + A TL + + D + +NS + +N + + + L
Sbjct: 62 HTLFRLYLSC--ERLYGAARTLSAMCTFGVVPDSRL----WNSLIHQFNVNGLVHDQVSL 115
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+Y KM + G+ D ++ ++ K+G +L L + +D+ ++T +
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL-LRNRVISIDTVTYNT-----VIS 169
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L + G A EA +F +M + GIL D Y +LI F + A+ L E E ++
Sbjct: 170 GLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLIT 229
Query: 328 --------------------------DPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAK 359
DP+V ++ + G V + ++ M+
Sbjct: 230 HTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMS 289
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+ + +V+ K Y A+ +Y Q++ +G V Y +++ + +AE
Sbjct: 290 VYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAE 349
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
K F + + VV Y+++V K G + A +++ +M K PNV Y+S+++ +
Sbjct: 350 KTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGY 409
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+ L + L ++ME + V P+ +Y TVI +A + +M ++ E R+ G +
Sbjct: 410 VKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENN 469
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
I +V ++ +I+E+ L++DM S+G LD+ Y S ++ G
Sbjct: 470 YILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/430 (18%), Positives = 182/430 (42%), Gaps = 39/430 (9%)
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
L+ +M+ + + Y ++++ +K AL+ + R + P +Y +L
Sbjct: 280 LLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGI---PVDLVVYTVLM 336
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
D L K+G EA K F+ + E + + Y +L+ ++ AE + + EK ++
Sbjct: 337 DGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVI 396
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF------------ 374
+ ++ Y+++G++E+ + ++ M++ + + +++G
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Query: 375 ----------------------SKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCR 411
KR G VK + + ++S+G Q+ Y S+I+ + +
Sbjct: 457 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
A EMQ++G VV+Y+ +++ K G++ A W M+ KG EP++
Sbjct: 517 GGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIAT 575
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+N +M+ + + + KLW +M+ + P +S V+ + + + N+
Sbjct: 576 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
+ + I + SK + + + K + + S G KL ++Y++ + L G+
Sbjct: 636 LMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTK 695
Query: 592 QAQWLQQNFE 601
+A + + E
Sbjct: 696 KAAMVMGDME 705
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/489 (20%), Positives = 198/489 (40%), Gaps = 46/489 (9%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYST 205
N +P+ T + LV +A A ++ + I ++ ++S + GY K M
Sbjct: 359 NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEA 418
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ + KM+ +V + Y +++ +K G E L K +L + ++ L
Sbjct: 419 VSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL---SKEMRLIGVEENNYILDAL 475
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ L + GR E +DM KG+ D Y SLI F + + A +E +E+GM
Sbjct: 476 VNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 535
Query: 326 LRD--------------------------------PEVCLKLVLMYIE--EGLVEKTLDV 351
D P++ ++M + +G E L +
Sbjct: 536 PWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKL 595
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYEQLISQGCIPGQVTYASIINAYC 410
+ MK+ +K S +SC IV G G A+ + Q++ P TY ++
Sbjct: 596 WDKMKSCGIKPS-LMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSS 654
Query: 411 RIALYSKAEKVFIEMQ---QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+ + +A+ +F + G Y++++A K G + A ++ M+A+G P
Sbjct: 655 K---HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIP 711
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
+ +NSLM + ++R+ + M ++P+ +Y T+I + A K+
Sbjct: 712 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL 771
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
+E + G D ++ +K+ ++ + + +M ++G Y+ ++ +
Sbjct: 772 SEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANV 831
Query: 588 GLQMQAQWL 596
G +QA+ L
Sbjct: 832 GKMLQAREL 840
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/313 (17%), Positives = 134/313 (42%), Gaps = 23/313 (7%)
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRD---------------PEVCLKLVLMYIEEG 343
S +C+F + + +L L + G++ D P+V VL++
Sbjct: 82 SAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIH-SFC 140
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
V + + ++N + I +++G + A + +++ G +P V+Y
Sbjct: 141 KVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYN 200
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
++I+ +C++ + +A+ + E+ + + SS ++ RD M
Sbjct: 201 TLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRD-------MVMS 253
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
G +P+V ++S+++ + + + L +EME V P+ V+YTT++ + +A +
Sbjct: 254 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ Y++ + G +D + +++ K + E K + + + + Y + ++
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 373
Query: 584 LRDAGLQMQAQWL 596
L AG A+++
Sbjct: 374 LCKAGDLSSAEFI 386
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 181/455 (39%), Gaps = 76/455 (16%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ LHG K + E + K+ F P+ T LI ++ K D
Sbjct: 43 PDVVTYNTLLHGFCKVGELDEALKIFDGAVKR--GFVPDVVTYNALINGFCKADKLDEAQ 100
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
+ + N++PD T + LV + + A ++ I D G++
Sbjct: 101 RILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEA----RMLIVDK------------GFS 144
Query: 198 KLHMYYSTIL---------VYEKMKSAGIVLDSG------CYCQIMEAYYKIGDSEKVAA 242
+ YST++ V E +K G VL G Y +++ K +
Sbjct: 145 PNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFE 204
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
LF L+ + Y + D L K+GR +AL +DM EKG + D + ++I
Sbjct: 205 LFSGLVKHGLEPDAIT---YTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 261
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
V AE L E KG S
Sbjct: 262 GLCKEKRVDEAEVLLSGMEAKGC----------------------------SPNAISFNT 293
Query: 363 SDCISCAIVNGFSKRRGYWA-AVKVYEQLISQGCIPGQVTYASIINAYCRI---ALYSKA 418
C C R G W A+ +++++ +G P VTY +++ C+ +A
Sbjct: 294 LICGQC--------RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 345
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+F M +KG VV YS+++ GK G++ DA L+ M+AKGC PNV+ YNSL+
Sbjct: 346 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 405
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ + + +L+ M + PD ++Y T+ISA
Sbjct: 406 LCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 185/442 (41%), Gaps = 17/442 (3%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P + T L+ L + +L E PD T + L+ + + A
Sbjct: 6 FWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEAL 65
Query: 173 TLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + G + ++ +N+ + G+ K + ++M S +V D Y ++
Sbjct: 66 KIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGL 125
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCDSLGKSGRAF-EALKFFRDMKEK 288
K G ++ L ++ FS ++ Y L L + R EALK F + ++
Sbjct: 126 CKNGRVDEARMLIVD--------KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G + Y LI V A ELF + G+ D + + G VE
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237
Query: 349 LDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
L +++ M + K + D +S A++NG K + A + + ++GC P +++ ++I
Sbjct: 238 LLMLKDM-DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 296
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT---GRIRDAMWLVAKMKAKG 464
CR + KA F EM ++G VV Y+ +V K GRI++A+ L M KG
Sbjct: 297 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 356
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
P+V Y++L+D G+A L +L ME + P+ +Y ++IS + D +
Sbjct: 357 RVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEAL 416
Query: 525 KFYNEFRMNGGVIDRAIAGIMV 546
+ + G V D G ++
Sbjct: 417 ELFVAMVEKGCVPDTITYGTII 438
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 179/420 (42%), Gaps = 22/420 (5%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ +N+ + G +YE+M AG D Y ++ + K+G+ ++ +F
Sbjct: 11 ITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDG 70
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
R P Y L + K+ + EA + + M + ++ D Y SL+
Sbjct: 71 AVKRGF--VP-DVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK--NAKLKISD 364
V A L + KG P V L+ GL + V E++K + LK
Sbjct: 128 NGRVDEARMLIVD---KGF--SPNVITYSTLI---SGLCRELRGVSEALKLFGSVLKQGY 179
Query: 365 CISCA----IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
+++G K A +++ L+ G P +TY I+ C+ A
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 239
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+ +M +KG VV++++++ K R+ +A L++ M+AKGC PN +N+L+
Sbjct: 240 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 299
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE---FDMCVKFYNEFRMNGGVI 537
RA ++ +KEM +R V P V+Y ++ +AR+ + ++ G V
Sbjct: 300 RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 359
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQ 597
D ++ K ++++ +LL M+++G + Y+S ++ L GL+ + L+
Sbjct: 360 DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGL--CGLEKVDEALE 417
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/441 (20%), Positives = 187/441 (42%), Gaps = 15/441 (3%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
P+ T + L++ + A L + I G ++ +N+ + G+ K+ + +
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
++ G V D Y ++ + K ++ + S L P Y L +
Sbjct: 68 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENL--VP-DVVTYNSLVNG 124
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA-SITEVKLAEELFKEAEEKGMLR 327
L K+GR EA D KG + Y++LI + V A +LF ++G
Sbjct: 125 LCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGY-- 179
Query: 328 DPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+PEV +L+ ++E V + ++ + L+ ++G K A+
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 239
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+ + + +GC+P V++ ++IN C+ +AE + M+ KG +++++++
Sbjct: 240 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 299
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN---LRQVEKLWKEMERRKVTP 502
+ G+ + AM +M +G +P V YN L+D +A+ +++ L+ M + P
Sbjct: 300 RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 359
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D V+Y+ +I +A + D + G + + ++ L +++E ++L
Sbjct: 360 DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELF 419
Query: 563 QDMKSEGTKLDERLYHSAMNA 583
M +G D Y + ++A
Sbjct: 420 VAMVEKGCVPDTITYGTIISA 440
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
G P ++TY ++++ C S A+ ++ M + G+ VV Y++++ + K G + +
Sbjct: 4 HGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDE 63
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A+ + +G P+V YN+L++ +A L + +++ + M + PD V+Y ++++
Sbjct: 64 ALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVN 123
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAI-------AGIMVGVFSKLSQIEELVKLLQDM 565
+ D E RM ++D+ + ++ G+ +L + E +KL +
Sbjct: 124 GLCKNGRVD-------EARML--IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSV 174
Query: 566 KSEGTKLDERLYHSAMNAL 584
+G + + Y+ ++ L
Sbjct: 175 LKQGYEPEVPTYNILIDGL 193
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%)
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M+ G PN YN+L+ + + L++ M + +PD V+Y T++ + + E
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
D +K ++ G V D ++ F K +++E ++LQ M SE D Y+S
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 580 AMNALRDAGLQMQAQWL 596
+N L G +A+ L
Sbjct: 121 LVNGLCKNGRVDEARML 137
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 63/140 (45%)
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M++ GF + Y+++++ GR+ DA L +M G P+V YN+L+ +
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
L + K++ +R PD V+Y +I+ + +A + D + V D
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 545 MVGVFSKLSQIEELVKLLQD 564
+V K +++E L+ D
Sbjct: 121 LVNGLCKNGRVDEARMLIVD 140
>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
Length = 595
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 175/396 (44%), Gaps = 49/396 (12%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
YE M S GI + +++ + K+G + +V A FL+ K L +Y I D+
Sbjct: 58 YEAMVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLH---LDKVIYNIAMDT 114
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
K+G EA+K +MK G+ D Y LI + E++ A+++F+E + + +
Sbjct: 115 YCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANI--E 172
Query: 329 PEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
P++ +L + + GLV + D+++ M +
Sbjct: 173 PDIVTYNILASGFCKSGLVMEVFDLLDRMAD----------------------------- 203
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
QG P +TY I +CR S+AE +F +++KG D V YSSMV Y
Sbjct: 204 ------QGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLL 257
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
+G A L ++ +G + + + L++ R N++ + K M V PD +S
Sbjct: 258 SGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVIS 317
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y+ +IS Y + + D ++++ G ID + I++ + K +++E +L M
Sbjct: 318 YSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMT 377
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+ G K D Y L D L+ + LQQ +EG
Sbjct: 378 NLGIKPDVIAY----TVLLDGHLK---ETLQQGWEG 406
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 118/515 (22%), Positives = 213/515 (41%), Gaps = 39/515 (7%)
Query: 88 HGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI--RYLVQSK-KWDSIVSLSEDFK 144
+ M+ D +E+ D EA+KL E + + + + YL+QS K +++ + ++
Sbjct: 3 YNMVMDGLCKEMRLD---EAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYE 59
Query: 145 I---YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL----LAFNSAMGGYN 197
+ + + H S L+ C R K + + ++ F+ + L + +N AM Y
Sbjct: 60 AMVSHGIETNCHIVSYLL-QCFR--KLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYC 116
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
K + + +MK G+ D Y ++ Y G+ + +F E ++
Sbjct: 117 KNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIV 176
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ Y IL KSG E M ++G+ + Y I F + AE LF
Sbjct: 177 T---YNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLF 233
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT-LDVVESMKNAKLKISDCISCA-IVNGFS 375
EEKG+ + +V Y+ G + + V + L D SC+ ++N
Sbjct: 234 NVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNL--VDHFSCSKLINDLC 291
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ A V + ++ +P ++Y+ +I+ YC+ KA F +M Q+G V+
Sbjct: 292 RVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVI 351
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH----------GRAKNL 485
Y+ ++ Y K GR+++A L +M G +P+V Y L+D H G AK
Sbjct: 352 VYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKER 411
Query: 486 RQV------EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
R KL M+ ++ PD YT +I +A + ++E G D
Sbjct: 412 RSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDA 471
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
++ + +I + LLQ+M +G + DE
Sbjct: 472 YAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDE 506
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/391 (18%), Positives = 153/391 (39%), Gaps = 20/391 (5%)
Query: 137 VSLSEDFKIYNVLPDA-HTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGG 195
V L + K + PD H + C++ ++ + E ++ +N G
Sbjct: 125 VKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASG 184
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ K + + ++M G+ +S Y + + + G+ + LF + + +D
Sbjct: 185 FCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHI 244
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
MY + SG A F + +G L D + LI + V+ A
Sbjct: 245 EV---MYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASN 301
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ K E ++ D KL+ +Y + G ++K M L I + ++NG+
Sbjct: 302 VCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYC 361
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR----------------IALYSKAE 419
K A +++ Q+ + G P + Y +++ + + L +
Sbjct: 362 KAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHN 421
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
K+ M+ + V Y+ ++ K + +A L +M KG P+ + Y +L++ +
Sbjct: 422 KLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGY 481
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
+ + E L +EM + + PD+++++ V
Sbjct: 482 CSQGEISKAEDLLQEMIDKGIEPDELTFSEV 512
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 205/480 (42%), Gaps = 41/480 (8%)
Query: 91 LKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLP 150
L+D + + A D +++ K F P L+ +V+ KK+D ++SL + ++ +
Sbjct: 61 LRDIKLND-AIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVY 209
D +T + ++ + +A ++L + G E + S + G+ + + + +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+KM G D Y I+++ K F E + + + + Y L + L
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT---YTALVNGL 235
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
S R +A + DM +K I + Y++L+ +F +V A+ELF+E
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEE---------- 285
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
+V M I+ +V + ++VNG A ++++
Sbjct: 286 -----MVRMSIDPDIVTYS--------------------SLVNGLCLHDRIDEANQMFDL 320
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
++S+GC+ V+Y ++IN +C+ K+F EM Q+G V Y++++ + + G
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ A ++M G P++W YN L+ L + ++++M++R++ D V+YTT
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
VI + + + + + G D M+ + E+ L MK EG
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 175/418 (41%), Gaps = 53/418 (12%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD-------SGCYCQIMEAYYKIGDS 237
+++ FN + KL Y I + +KM+ GI D C+C +
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSL----- 138
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
AL + K KL P + L + + R +A+ M E G D Y
Sbjct: 139 ----ALSILGKMLKLGYEPDRVTIGS-LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY 193
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++I S V A + FKE E KG I +V T
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKG---------------IRPNVVTYT--------- 229
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
A+VNG + A ++ +I + P +TY+++++A+ + +
Sbjct: 230 -----------ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A+++F EM + D +V YSS+V RI +A + M +KGC +V YN+L++
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+AK + KL++EM +R + + V+Y T+I + +A + D +F+++ G
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
D I++G ++E+ + + +DM+ LD Y + + + G +++ W
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG-KVEEAW 455
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 119/236 (50%), Gaps = 2/236 (0%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++VNGF +R AV + ++++ G P V Y +II++ C+ + A F E+++K
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G VV Y+++V + R DA L++ M K PNV Y++L+D + + +
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
++L++EM R + PD V+Y+++++ D + ++ G + D ++
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ--WLQQNFEG 602
F K ++E+ +KL ++M G + Y++ + AG +AQ + Q +F G
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 163/398 (40%), Gaps = 59/398 (14%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ + + K + + A+D++ E ++ RP T L+ L S +W
Sbjct: 188 PDIVAYNAIIDSLCKTKRVND-AFDFFKEIER-KGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
L D + P+ T S L+ + V+ K A L + E+ ++ + + Y+
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE------EMVRMSIDPDIVTYS 299
Query: 198 KLHMYYSTILVYEKMKSAGIVLD----SGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
L + + +++++ A + D GC ++
Sbjct: 300 SL---VNGLCLHDRIDEANQMFDLMVSKGCLADVVS------------------------ 332
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
Y L + K+ R + +K FR+M ++G++ + Y +LI F +V A
Sbjct: 333 --------YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
+E F + + G+ P++ +L+ + G +EK L + E M+ ++ + ++
Sbjct: 385 QEFFSQMDFFGI--SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
G K A ++ L +G P VTY ++++ C L + E ++ +M+Q+G
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
K S G I + L+ KM + G P++
Sbjct: 503 KNDCTLSD--------GDITLSAELIKKMLSCGYAPSL 532
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/471 (21%), Positives = 190/471 (40%), Gaps = 42/471 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T +LI L ++ K D + + V PD T + ++ +A KF+ A++L
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 175 LQVFIT-DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L V + + +N+ + G K + ++ S+G V D
Sbjct: 68 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPD------------- 114
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
Y IL D L K GR EA + ++M G +
Sbjct: 115 -------------------------VVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPN 149
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y +LI ++ + A EL + G + D +V +EG ++K L +VE
Sbjct: 150 LVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVE 209
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M S A++ G + A ++++++S+ C + Y S++N YC+ +
Sbjct: 210 GMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSS 269
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+A+KV ++ + + Y++++ Y K GR+ + + M +GC PN+ YN
Sbjct: 270 RTKEAQKVVDGIRGTPY---IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYN 326
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+MD + + + + M PD VSY +I +A + + ++
Sbjct: 327 IVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA 386
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G D ++ F K + ++ V +L++M G D Y++ ++ L
Sbjct: 387 GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 437
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/533 (20%), Positives = 215/533 (40%), Gaps = 22/533 (4%)
Query: 72 HHQTAVPDAKKFDSFLHGMLKDPQTQ---ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
+ + PD ++ + G+ K +T E+ ++ + P+ T ++ L
Sbjct: 2 NERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRG-----VTPDTVTFNSIMDGLC 56
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LL 187
++ K++ SL N P T + L++ + + A TL+ F++ G + ++
Sbjct: 57 KAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVV 116
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
++ G K + ++M G + Y +++ K +EK L
Sbjct: 117 TYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELL--- 173
Query: 248 KSRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
L S+ F + Y I+ D L K GR +ALK M ++G Y +L+
Sbjct: 174 --ETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLC 231
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK-LKISD 364
V A +FKE K D + LV Y + ++ VV+ ++ + + +
Sbjct: 232 RTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYN 291
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
A+++G+ K V+E + +GC+P TY +++ C+ +A
Sbjct: 292 ----ALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLES 347
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M G VV+Y+ ++ K + ++A ++ +M G P+ YN+LM + +
Sbjct: 348 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 407
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-G 543
+ K M + V PD V+Y T+IS ++ + +E NG V+
Sbjct: 408 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 467
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ K +++ + L+ M G + + Y+ ++ L G +A L
Sbjct: 468 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSL 520
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 108/566 (19%), Positives = 225/566 (39%), Gaps = 43/566 (7%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIR 125
EL ++ P+ +++ + G+ K +T++ AY+ E F P+ T +++
Sbjct: 136 ELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEK-AYELL-ETLVSSGFVPDVVTYTIIVD 193
Query: 126 YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-DGEI 184
L + + D + + E P T + L+ R + A+ + + ++ D
Sbjct: 194 GLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTA 253
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
LA+ S + GY K V + ++ + Y +M+ Y K G +++ +F
Sbjct: 254 DALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI---DVYNALMDGYCKEGRLDEIPNVF 310
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ R P + Y I+ D L K G+ EA F M G + D Y +I
Sbjct: 311 EDMACRG--CVP-NIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 367
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
++ K A ++ + + G+ D L+ + +E + + ++++M A + +
Sbjct: 368 FKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDN 427
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCI-PGQVTYASIINAYCRIALYSKAEKVFI 423
+++G S+ A ++ +++ GC+ TY +II+ C+ +A +
Sbjct: 428 VTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMD 487
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA--------------------- 462
M G + V Y+ + K GR+ +A L+++M
Sbjct: 488 HMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLD 547
Query: 463 ------------KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
KG +N L+D + K L + L + M +R +P ++Y V
Sbjct: 548 RASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMV 607
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
I+ + + D + ++E + G V +++ + +E +++L++M S
Sbjct: 608 ITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDC 667
Query: 571 KLDERLYHSAMNALRDAGLQMQAQWL 596
++D+ ALR G +A L
Sbjct: 668 EIDDLKCRKLYLALRGQGRGEEAAEL 693
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 4/237 (1%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+I++G K + A + + + C P TY ++I+ C+ +A+ + E
Sbjct: 50 SIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSS 109
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
GF VV YS + K GRI +A LV +M GC PN+ YN+L+D +A +
Sbjct: 110 GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKA 169
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA--GIMV 546
+L + + PD V+YT ++ + D +K E + G I +M
Sbjct: 170 YELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMV-EGMLKRGCTPSVITYTALME 228
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
G + +++E + ++M S+ D Y S +N + +AQ + GT
Sbjct: 229 G-LCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT 284
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 138/335 (41%), Gaps = 38/335 (11%)
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M E+ + D Y LI ++ A E+ E ++G+ D ++ + G
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA- 403
E+ ++ M + S C +++G K++ A + ++ +S G +P VTY+
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 404 ----------------------------------SIINAYCRIALYSKAEKVFIEMQQKG 429
++I+ C+ + KA ++ + G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
F VV Y+ +V K GR+ A+ +V M +GC P+V Y +LM+ R + +
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
++KEM + T D ++Y ++++ Y ++ K + R G + ++ +
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR---GTPYIDVYNALMDGY 297
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
K +++E+ + +DM G + + Y+ M+ L
Sbjct: 298 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGL 332
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 133/337 (39%), Gaps = 41/337 (12%)
Query: 62 FPTIELNRDSHHQTAVPDAKKFDSFLHGMLK--DPQTQELAYDYYNEAKKLPEFRPEKST 119
FP +E H VPD ++ + G+ K P+ D +A +P P+ T
Sbjct: 342 FPFLE---SMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAG-IP---PDAVT 394
Query: 120 LKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
L+ + +++D V + ++ V PD T + L++ + + A L+ +
Sbjct: 395 YNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 454
Query: 180 TDGEI--ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
+G + A +N+ + K +L+ + M G+ ++ Y ++ K G
Sbjct: 455 RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRL 514
Query: 238 EKVAALFLE-----------------CKSRKLDSTP-------------FSTHMYKILCD 267
++ ++L E CK+ +LD ++H + +L D
Sbjct: 515 DEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLID 574
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ K+ R EAL M ++G Y +I + +V A ELF E +G++
Sbjct: 575 AFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVA 634
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
L+ +G ++ L V+E M ++ +I D
Sbjct: 635 SSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDD 671
>gi|255661176|gb|ACU25757.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 426
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 160/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G + D ++ ++ L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQHRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAVLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 152/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G + D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGXAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G++ + L+ MY+E + L V M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQHRGIEPNSITYSTIISIWGKVGKLDRAAVL 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM------------------- 532
++++ V D+V Y T+I AY RA + +E +
Sbjct: 277 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 533 ------------NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 189/425 (44%), Gaps = 12/425 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T LI + + +D+ +S + + V D S L+ + + A ++
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G + L+A+N+ + + ++ + +M++AG++ ++ Y ++ Y +
Sbjct: 67 FSRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVE 126
Query: 234 IGDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ ++F E + K LD T + I+ D G+ G A EA K F M++ GI
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y +L+ + A LF+ + K + ++ ++++Y + EK ++
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++ M++ ++ + I++ + K A ++++L S G QV Y ++I AY R
Sbjct: 242 IQEMQHRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKLRSSGVEIDQVLYQTMIVAYER 301
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
L + A+++ E+++ +A + + GRI +A W+ + G ++ +
Sbjct: 302 AGLVAHAKRLLHELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+ ++ + + K V +++ +M PD V++AY + EFD Y E +
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQ 417
Query: 532 MNGGV 536
G V
Sbjct: 418 EVGCV 422
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 103/212 (48%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G AK R+ L EM V P+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 143/355 (40%), Gaps = 47/355 (13%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA- 171
F P+ +I +K + SL + + V+P+ + S L+ V +KF A
Sbjct: 75 FMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEAL 134
Query: 172 ------------------NTLLQVFITDG-----------------EIALLAFNSAMGGY 196
N ++ V+ G E ++++N+ + Y
Sbjct: 135 SVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
++ I ++ M+ I + Y +M Y K + EK L E + R ++
Sbjct: 195 GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQHRGIEPNS 254
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y + GK G+ A F+ ++ G+ D +Y ++I ++ V A+ L
Sbjct: 255 IT---YSTIISIWGKVGKLDRAAVLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E L+ P+ + + ++I G +E+ V +A + +++ F
Sbjct: 312 LHE------LKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLF 365
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
SK + Y V+V++++ G P A ++NAY ++ + KA V++EMQ+ G
Sbjct: 366 SKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQHRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKLRSSGVEIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|410110149|gb|AFV61154.1| pentatricopeptide repeat-containing protein 123, partial
[Xeroaloysia ovatifolia]
Length = 431
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 154/322 (47%), Gaps = 3/322 (0%)
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 2 EMRERALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 58
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ + A +F + G D ++ ++ + L + ++ M+ A + +
Sbjct: 59 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA 118
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++ + + + + A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M
Sbjct: 119 SYTTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
++ G + VV+Y++++ +YG +A+ L M+ K NV YNS+M ++G+
Sbjct: 179 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEH 238
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ L +EM+ R + P+ ++Y+T+IS + +A + D + + R +G ID+ + M
Sbjct: 239 EKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTM 298
Query: 546 VGVFSKLSQIEELVKLLQDMKS 567
+ + K + +LL ++KS
Sbjct: 299 IVAYEKAGLVAHAKRLLHELKS 320
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 149/316 (47%), Gaps = 6/316 (1%)
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+M+E+ + D Y++LI F A ++ E+ + D + L+ + +
Sbjct: 2 EMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 61
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
K + + +K + A++N F K + + A + ++ + G +P +Y
Sbjct: 62 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYT 121
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS---MVAMYGKTGRIRDAMWLVAKM 460
+++ Y + +A VF EM++ KC++ ++ M+ +YG+ G ++A L M
Sbjct: 122 TLLTMYVENKKFLEALSVFSEMREI---KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ G EPNV YN+L+ ++G A+ + L++ M+R+ + + V+Y +++ Y + E
Sbjct: 179 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEH 238
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ E + G + ++ ++ K +++ L Q ++S G ++D+ LY +
Sbjct: 239 EKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTM 298
Query: 581 MNALRDAGLQMQAQWL 596
+ A AGL A+ L
Sbjct: 299 IVAYEKAGLVAHAKRL 314
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 168/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F+ + Y + +
Sbjct: 36 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKRSGFTPDLVAYNAMIN 90
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +M+ G++ + + Y +L+ + + A +F E E L
Sbjct: 91 VFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENKKFLEALSVFSEMREIKCLL 150
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 151 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 210
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 211 RLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKA 270
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + +Y +++ + +A + ++L E++ +PD +
Sbjct: 271 GKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELK----SPDNIPR 326
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ +FSK + +V++ M+
Sbjct: 327 DTAIHILAGAGRIEEATYVFRQAIDAGEVRDITVFERMIHLFSKYKKYANVVEVFDKMRG 386
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 387 LGYFPDSNVIALVLNA 402
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 164/353 (46%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG++ ++ Y ++ Y + + ++F
Sbjct: 82 LVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENKKFLEALSVFS 141
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 142 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 196
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K ++++ ++++Y + EK ++++ M+N ++ +
Sbjct: 197 YGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 256
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY + L + A+++
Sbjct: 257 SITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLH 316
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+ K D + + + + GRI +A ++ + G ++ ++ ++ + + K
Sbjct: 317 EL--KSPDN--IPRDTAIHILAGAGRIEEATYVFRQAIDAGEVRDITVFERMIHLFSKYK 372
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + EFD Y E + G V
Sbjct: 373 KYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVGCV 425
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 143/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 115 PNTASYTTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 174
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ IV + Y +M Y K
Sbjct: 175 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGK 234
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK+G+ A F+ ++ G+ D
Sbjct: 235 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKAGKLDRAAMLFQKLRSSGVEID 291
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + ++I G +E+ V
Sbjct: 292 QVLYQTMIVAYEKAGLVAHAKRLLHE------LKSPDNIPRDTAIHILAGAGRIEEATYV 345
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A ++NAY +
Sbjct: 346 FRQAIDAGEVRDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGK 405
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 406 LHEFDKANGVYMEMQEVG 423
>gi|255661210|gb|ACU25774.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 164/338 (48%), Gaps = 6/338 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G +AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRR 378
+ G+ D ++ ++ + L + ++ M+ A + + D +S ++ + + +
Sbjct: 70 LKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAGV-VPDTVSYSTLLTMYVENQ 128
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y+
Sbjct: 129 KFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYN 188
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ +YG +A+ L M+ K E NV YN++M ++G+ + L +EM R
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNR 248
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ P+ ++Y+T+IS + + + D + + R +G ID + M+ + + +
Sbjct: 249 GIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHA 308
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D +A++ L AG +A W+
Sbjct: 309 KRLLHELK----RPDNIPRDTAIHILAGAGRIEEATWV 342
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 153/363 (42%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K GI D Y S+I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGITPDLVAYNSMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-V 371
A L E E G++ D L+ MY+E + L V M+ K + D +C I +
Sbjct: 98 ARSLISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLV-DLTTCNIMI 156
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ + + A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y++M+ +YGKT A L+ +M +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN------------------ 533
++++ V D V Y T+I AY RA + +E +
Sbjct: 277 FQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRI 336
Query: 534 -------------GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
G V D + M+ +FSK + +V++ + M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVISLV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 190/428 (44%), Gaps = 18/428 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS----CVRARKFKI 170
P++ T LI + + +D +S + + V D S L+ C ++ I
Sbjct: 7 PDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 171 ANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ L + IT L+A+NS + + K ++ + +M+ AG+V D+ Y ++
Sbjct: 67 FSRLKRAGITPD---LVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTM 123
Query: 231 YYKIGDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
Y + + ++F E + K +D T + I+ D G+ A EA K F M++
Sbjct: 124 YVENQKFLEALSVFAEMREIKCLVDLTTCN-----IMIDVYGQLDMAKEADKLFWSMRKV 178
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI + Y +L+ + A LF+ + K + ++ ++++Y + EK
Sbjct: 179 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKA 238
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
++++ M N ++ + I++ + K A ++++L S G V Y ++I A
Sbjct: 239 NNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVA 298
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
Y R L + A+++ E+++ + + + + GRI +A W+ + G +
Sbjct: 299 YERAGLVAHAKRLLHELKRPD----NIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKD 354
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ ++ ++D+ + K V +++++M PD + V++AY + EFD Y
Sbjct: 355 ITVFERMIDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVISLVLNAYGKLHEFDXANDMYM 414
Query: 529 EFRMNGGV 536
+ + G V
Sbjct: 415 DMQDEGCV 422
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YNS++++ G+AK R+ L EM V PD VSY+T+++ Y
Sbjct: 67 FSRLKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKDIEQN 218
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/391 (18%), Positives = 166/391 (42%), Gaps = 34/391 (8%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+KM+ + D Y ++E K+ D K ++F K + TP Y + +
Sbjct: 33 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGI--TP-DLVAYNSMINVF 89
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
GK+ EA +M+E G++ D Y++L+ + + A +F E E L D
Sbjct: 90 GKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLVDL 149
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
C ++ +Y + + ++ + SM+ ++ + ++ + + A+ ++
Sbjct: 150 TTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRL 209
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ + VTY +++ Y + + KA + EM +G + + YS++++++GK G+
Sbjct: 210 MQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGK 269
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP------- 502
+ A L K+++ G E + +Y +++ + RA + ++L E++R P
Sbjct: 270 LDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHI 329
Query: 503 ------------------------DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
D + +I +++ +++ V+ + + R G D
Sbjct: 330 LAGAGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYKKYPNVVEVFEKMRGLGYFPD 389
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ +++ + KL + + + DM+ EG
Sbjct: 390 SNVISLVLNAYGKLHEFDXANDMYMDMQDEG 420
>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14770, mitochondrial; Flags: Precursor
Length = 940
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/525 (21%), Positives = 226/525 (43%), Gaps = 17/525 (3%)
Query: 77 VPDAKKFDSFLHGMLK--DPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
VP+ + + + G+ K D + E E +P T +I V+ +
Sbjct: 363 VPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNV----VTYSSMINGYVKKGMLE 418
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQ----VFITDGEIALLAFN 190
VSL + NV+P+ T ++ +A K ++A L + + + + L A
Sbjct: 419 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV 478
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ + ++ + + M S G+ LD Y +++ ++K GD E A E + R
Sbjct: 479 NHLKRIGRIKEVKGLV---KDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQER 535
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ P+ Y +L + K G+ A ++ M+EKGI D + + ++ S +
Sbjct: 536 GM---PWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDS 591
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
+ +L+ + + G+ C +V M E G +E+ + ++ M ++ +
Sbjct: 592 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 651
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++ SK + A K +E L+S G + Y ++I C++ + KA V +M+ +GF
Sbjct: 652 LDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 711
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
V ++S++ Y +R A+ + M G PNV YN+++ A +++V+K
Sbjct: 712 IPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDK 771
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
EM+ R + PD +Y +IS + + Y E +G V + +++ F+
Sbjct: 772 WLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFA 831
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
+ ++ + +LL++M G + Y + ++ L +W
Sbjct: 832 NVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEW 876
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/469 (22%), Positives = 204/469 (43%), Gaps = 45/469 (9%)
Query: 153 HTCSRLVASCVRARKFKIANTLLQV----FITDGEIALLAFNSAMGGYNKLHMYYSTI-L 207
HT RL SC R + A TL + + D + +NS + +N + + + L
Sbjct: 64 HTLFRLYLSC--ERLYGAARTLSAMCTFGVVPDSRL----WNSLIHQFNVNGLVHDQVSL 117
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+Y KM + G+ D ++ ++ K+G +L L + +D+ ++T +
Sbjct: 118 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL-LRNRVISIDTVTYNT-----VIS 171
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L + G A EA +F +M + GIL D Y +LI F + A+ L E E ++
Sbjct: 172 GLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLIT 231
Query: 328 --------------------------DPEVCL--KLVLMYIEEGLVEKTLDVVESMKNAK 359
DP+V ++ + G V + ++ M+
Sbjct: 232 HTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMS 291
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+ + +V+ K Y A+ +Y Q++ +G V Y +++ + +AE
Sbjct: 292 VYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAE 351
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
K F + + VV Y+++V K G + A +++ +M K PNV Y+S+++ +
Sbjct: 352 KTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGY 411
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+ L + L ++ME + V P+ +Y TVI +A + +M ++ E R+ G +
Sbjct: 412 VKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENN 471
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
I +V ++ +I+E+ L++DM S+G LD+ Y S ++ G
Sbjct: 472 YILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 520
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/430 (18%), Positives = 182/430 (42%), Gaps = 39/430 (9%)
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
L+ +M+ + + Y ++++ +K AL+ + R + P +Y +L
Sbjct: 282 LLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGI---PVDLVVYTVLM 338
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
D L K+G EA K F+ + E + + Y +L+ ++ AE + + EK ++
Sbjct: 339 DGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVI 398
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF------------ 374
+ ++ Y+++G++E+ + ++ M++ + + +++G
Sbjct: 399 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 458
Query: 375 ----------------------SKRRGYWAAVK-VYEQLISQGCIPGQVTYASIINAYCR 411
KR G VK + + ++S+G Q+ Y S+I+ + +
Sbjct: 459 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 518
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
A EMQ++G VV+Y+ +++ K G++ A W M+ KG EP++
Sbjct: 519 GGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIAT 577
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+N +M+ + + + KLW +M+ + P +S V+ + + + N+
Sbjct: 578 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 637
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
+ + I + SK + + + K + + S G KL ++Y++ + L G+
Sbjct: 638 LMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTK 697
Query: 592 QAQWLQQNFE 601
+A + + E
Sbjct: 698 KAAMVMGDME 707
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/489 (20%), Positives = 198/489 (40%), Gaps = 46/489 (9%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYST 205
N +P+ T + LV +A A ++ + I ++ ++S + GY K M
Sbjct: 361 NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEA 420
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ + KM+ +V + Y +++ +K G E L K +L + ++ L
Sbjct: 421 VSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL---SKEMRLIGVEENNYILDAL 477
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+ L + GR E +DM KG+ D Y SLI F + + A +E +E+GM
Sbjct: 478 VNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 537
Query: 326 LRD--------------------------------PEVCLKLVLMYIE--EGLVEKTLDV 351
D P++ ++M + +G E L +
Sbjct: 538 PWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKL 597
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYEQLISQGCIPGQVTYASIINAYC 410
+ MK+ +K S +SC IV G G A+ + Q++ P TY ++
Sbjct: 598 WDKMKSCGIKPS-LMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSS 656
Query: 411 RIALYSKAEKVFIEMQ---QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+ + +A+ +F + G Y++++A K G + A ++ M+A+G P
Sbjct: 657 K---HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIP 713
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
+ +NSLM + ++R+ + M ++P+ +Y T+I + A K+
Sbjct: 714 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL 773
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
+E + G D ++ +K+ ++ + + +M ++G Y+ ++ +
Sbjct: 774 SEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANV 833
Query: 588 GLQMQAQWL 596
G +QA+ L
Sbjct: 834 GKMLQAREL 842
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/313 (17%), Positives = 134/313 (42%), Gaps = 23/313 (7%)
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRD---------------PEVCLKLVLMYIEEG 343
S +C+F + + +L L + G++ D P+V VL++
Sbjct: 84 SAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIH-SFC 142
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
V + + ++N + I +++G + A + +++ G +P V+Y
Sbjct: 143 KVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYN 202
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
++I+ +C++ + +A+ + E+ + + SS ++ RD M
Sbjct: 203 TLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRD-------MVMS 255
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
G +P+V ++S+++ + + + L +EME V P+ V+YTT++ + +A +
Sbjct: 256 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 315
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ Y++ + G +D + +++ K + E K + + + + Y + ++
Sbjct: 316 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 375
Query: 584 LRDAGLQMQAQWL 596
L AG A+++
Sbjct: 376 LCKAGDLSSAEFI 388
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 192/447 (42%), Gaps = 60/447 (13%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
A N+ + + KL M + V+ KMK GI Y +M V+A+F++
Sbjct: 171 AANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGL--------VSAMFVDS 222
Query: 248 KSR----------KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
R K D ++T M K C K+G+ +A++ RDM+ +G D Y
Sbjct: 223 AERVFEVMESGRIKPDIVTYNT-MIKGYC----KAGQTQKAMEKLRDMETRGHEADKITY 277
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++I + + ++ L++E +EKG+ P ++ +EG + + V E+M
Sbjct: 278 MTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIR 337
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
K + I +++G++K A+++ ++I +G P VTY+ ++N C+ +
Sbjct: 338 KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 397
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A F + G + YSS++ GK GR+ +A L +M KGC + + YN+L+D
Sbjct: 398 ALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 457
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKV-SYTTVIS------------------------ 512
+ + + + L+K ME + V +YT ++S
Sbjct: 458 AFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGIT 517
Query: 513 ---AYNRAREFDMCV--------KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
A RA +C+ K +E G ++D A M+ K +I+E KL
Sbjct: 518 PTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKL 576
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAG 588
+ G ++ R+ +NALR G
Sbjct: 577 ADGITERGREVPGRIRTVMINALRKVG 603
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 159/389 (40%), Gaps = 51/389 (13%)
Query: 223 CYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFF 282
CY +++ D +++ + E K + P + L S GK G E L +
Sbjct: 136 CYVSLVDVLALAKDVDRIRFVSSEIKKFEF---PMTVSAANALIKSFGKLGMVEELLWVW 192
Query: 283 RDMKEKGILEDPSIYAS--LICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLM 338
R MKE GI +P++Y L+ S V AE +F E E G ++ P++ ++
Sbjct: 193 RKMKENGI--EPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIK-PDIVTYNTMIKG 248
Query: 339 YIEEGLVEKTLDVVESMKN---------------AKLKISDCISCA-------------- 369
Y + G +K ++ + M+ A SD SC
Sbjct: 249 YCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVP 308
Query: 370 ------IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
++ G K V+E +I +G P Y +I+ Y + A ++
Sbjct: 309 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 368
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M +GF VV YS +V K GR+ +A+ + G N Y+SL+D G+A
Sbjct: 369 RMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAG 428
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI-- 541
+ + E+L++EM + T D Y +I A+ + R+ D + + G D+ +
Sbjct: 429 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGC-DQTVYT 487
Query: 542 -AGIMVGVFSKLSQIEELVKLLQDMKSEG 569
++ G+F K + EE +KL M +G
Sbjct: 488 YTILLSGMF-KEHRNEEALKLWDMMIDKG 515
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%)
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y S+++ + V E+++ F V A ++++ +GK G + + +W+ KMK
Sbjct: 137 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 196
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
G EP ++ YN LM+ A + E++++ ME ++ PD V+Y T+I Y +A +
Sbjct: 197 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 256
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
++ + G D+ M+ S V L Q+M +G ++ + +
Sbjct: 257 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 316
Query: 582 NALRDAG 588
L G
Sbjct: 317 GGLCKEG 323
>gi|255661170|gb|ACU25754.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 426
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 160/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 150/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G+ + L+ MY+E + L V M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V + M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVVVFDKMRGLGYFPDSNVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 161/353 (45%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG+ ++ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ +A + + GRI +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V ++ +M PD V++AY + EFD Y E + G V
Sbjct: 370 KYGNVVVVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 141/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDIAIHILAGAGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V V++++ G P A ++NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVVVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANDVYMEMQEVG 420
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 82/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + +F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVVVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|410110093|gb|AFV61126.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
microcephala]
Length = 440
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 155/325 (47%), Gaps = 3/325 (0%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 1 GLFDEMRQRALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLI 57
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A +F + G D ++ ++ + L + ++ MK A +
Sbjct: 58 ELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVM 117
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++ + + + + A+ V+ ++ C+ T +I+ Y ++ + +A+K+
Sbjct: 118 PNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M++ G + VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G+
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ +
Sbjct: 238 TLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQIL 297
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMK 566
M+ + + + +LL ++K
Sbjct: 298 FQTMIVAYERAGLVAHAKRLLHELK 322
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 152/319 (47%), Gaps = 6/319 (1%)
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
F +M+++ + D Y++LI F A ++ E+ + D + L+ +
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ K + + +K + A++N F K + + A + ++ + G +P
Sbjct: 62 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTA 121
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS---MVAMYGKTGRIRDAMWLV 457
+Y++++ Y + +A VF EM++ KC++ ++ M+ +YG+ G ++A L
Sbjct: 122 SYSTLLTMYVENKKFLEALSVFSEMREI---KCLLDLTTCNIMIDVYGQLGMAKEADKLF 178
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
M+ G EPNV YN+L+ ++G A+ + L++ M+R+ + + V+Y +++ Y +
Sbjct: 179 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 238
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
E + E + G + ++ ++ K+ +++ L Q ++S G ++D+ L+
Sbjct: 239 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILF 298
Query: 578 HSAMNALRDAGLQMQAQWL 596
+ + A AGL A+ L
Sbjct: 299 QTMIVAYERAGLVAHAKRL 317
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 167/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F+ + Y + +
Sbjct: 39 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKRSGFTPDLVAYNAMIN 93
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +MK G++ + + Y++L+ + + A +F E E L
Sbjct: 94 VFGKAKLFREARSLIGEMKAAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLL 153
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 154 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 213
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 214 RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV 273
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + ++ +++ + RA + ++L E++R PD +
Sbjct: 274 GKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKR----PDNIPR 329
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ + SK + +V++ M+
Sbjct: 330 DTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRG 389
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 390 LGYFPDSDVIAIVLNA 405
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 164/353 (46%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +MK+AG++ ++ Y ++ Y + + ++F
Sbjct: 85 LVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYSTLLTMYVENKKFLEALSVFS 144
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 145 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 199
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M++ ++ +
Sbjct: 200 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPN 259
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G Q+ + ++I AY R L + A+++
Sbjct: 260 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLH 319
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ + + + + GRI +A ++ + G ++ ++ ++ + + K
Sbjct: 320 ELKRPD----NIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYK 375
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + +EFD Y E + G V
Sbjct: 376 KYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGCV 428
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 140/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 118 PNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E +SR ++ + Y + GK G+ A F+ ++ GI D
Sbjct: 238 TLEHEKANNLIQEMQSRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGIEID 294
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
++ ++I ++ V A+ L E L+ P+ + ++I G +E+ V
Sbjct: 295 QILFQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDTAIHILAGAGRIEEATYV 348
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ SK + Y V+V++++ G P A ++NAY +
Sbjct: 349 FRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGK 408
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 409 LQEFDKANDVYMEMQEVG 426
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 86/195 (44%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q + G E + +++ + + K+ ++++K++S+GI +D + ++
Sbjct: 244 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIV 303
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P T ++ L +GR EA FR + G
Sbjct: 304 AYERAGLVAHAKRLLHELK--RPDNIPRDTAIH-----ILAGAGRIEEATYVFRQAIDAG 356
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I + + E+F + G D +V ++ Y + +K
Sbjct: 357 EVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKAN 416
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 417 DVYMEMQEVGCVFSD 431
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 159/355 (44%), Gaps = 15/355 (4%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ +N+ + G + + + + + +M++ G++ D Y ++ Y K G+ ++ LF
Sbjct: 1225 VVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFG 1284
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ + L T + Y IL D + G EA +M E+G L + Y L+
Sbjct: 1285 DLRRAGLAPTVLT---YNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSL 1341
Query: 306 SITEVKLAEELFKEAEEKGMLRD-----PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
++ + +A E F E KG+ D +C +L+L I + + ++E +
Sbjct: 1342 NVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGIS---- 1397
Query: 361 KISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
SD ++ I ++G K A ++ +++S G P +TY +I+A+C L +A
Sbjct: 1398 --SDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREAR 1455
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
K+F M G V ++ ++ Y + G + A KM +G EPN YN L+
Sbjct: 1456 KIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 1515
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
R + + EM R + +K +YT +I + ++ ++FY E NG
Sbjct: 1516 CRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNG 1570
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 154/350 (44%), Gaps = 21/350 (6%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKG--ILEDPSIYASLICSFASITEVKLAEELFK- 318
Y L DS K GR + ++M+ +G L + Y +I +++ A EL +
Sbjct: 1122 YNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEG 1181
Query: 319 ---EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ +P L+ + G V+K D+ M+N + + A+++G
Sbjct: 1182 MRLSKKASSFTYNP-----LITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLL 1236
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ AA + ++ + G +P +TY S++N YC+ +A +F ++++ G V+
Sbjct: 1237 QSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVL 1296
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+ ++ Y + G + +A L +M +GC PNV Y LM ++L + + EM
Sbjct: 1297 TYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEM 1356
Query: 496 ERRKVTPDKVSYTTVISAY----NRAREFDMCVKFYNEFRMNGGV-IDRAIAGIMVGVFS 550
+ + PD +Y T I A + AR F++ E M G+ D I++
Sbjct: 1357 LSKGLQPDCFAYNTRICAELILGDIARAFEL-----REVLMLEGISSDTVTYNILIHGLC 1411
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
K +++ +L M S G + D Y ++A + GL +A+ + N
Sbjct: 1412 KTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNM 1461
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 187/449 (41%), Gaps = 21/449 (4%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFK----IANTLLQVFITDGEIALLAFNSAMGGYNKLHM 201
+ V PD C+R++ A ++ + +L++ I E +++ +N+ + + K
Sbjct: 1078 HGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGI---EPSIVTYNTLLDSFLKEGR 1134
Query: 202 YYSTILVYEKMKSAGIVLDSGC------YCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
++ ++M++ G SGC Y ++ + GD E+ A L + +L S
Sbjct: 1135 KDKVAMLLKEMETRG----SGCLPNDVTYNVVITGLTRKGDLEEAAELV---EGMRL-SK 1186
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
S+ Y L L G + +M+ +GI+ Y ++I V+ A+
Sbjct: 1187 KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQV 1246
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
F E G+L D L+ Y + G +++ L + ++ A L + +++G+
Sbjct: 1247 KFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYC 1306
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ A + E++ QGC+P TY ++ + + A + F EM KG
Sbjct: 1307 RLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCF 1366
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
AY++ + G I A L + +G + YN L+ + NL+ ++L +M
Sbjct: 1367 AYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKM 1426
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ PD ++YT +I A+ K +N +G + +++ + + +
Sbjct: 1427 VSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNL 1486
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ M EG + +E Y+ ++AL
Sbjct: 1487 YSAYGWFRKMLEEGVEPNEITYNVLIHAL 1515
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 147/363 (40%), Gaps = 4/363 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +I L+QS ++ + + +LPD T + L+ +A K A L
Sbjct: 1223 PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLL 1282
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G +L +N + GY +L ++ E+M G + + Y +M+
Sbjct: 1283 FGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLN 1342
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ F E S+ L F+ + LG RAFE + + +GI D
Sbjct: 1343 VRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREV---LMLEGISSD 1399
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y LI +K A+EL + G+ D L+ + E GL+ + +
Sbjct: 1400 TVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFN 1459
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+M + L S I++ + +R ++A + +++ +G P ++TY +I+A CR+
Sbjct: 1460 NMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMG 1519
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
A F EM ++G Y+ ++ K G DAM +M G P+ +
Sbjct: 1520 RTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHK 1579
Query: 474 SLM 476
+L+
Sbjct: 1580 ALL 1582
>gi|255661150|gb|ACU25744.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
gi|255661152|gb|ACU25745.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 426
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 159/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ MK A + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ ++ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 152/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E + G+ D L+ MY+E + L + M+ K + D +C I+
Sbjct: 98 ARSLISEMKTAGVTPDTASYSTLLTMYVENKKFLEALSIFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 162/353 (45%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +MK+AG+ D+ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTLLTMYVENKKFLEALSIFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ +A + + GRI +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + EFD Y E + G V
Sbjct: 370 KYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 106/212 (50%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM+ VTPD SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 143/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PDTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDIAIHILAGAGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A ++NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANDVYMEMQEVG 420
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/497 (20%), Positives = 199/497 (40%), Gaps = 32/497 (6%)
Query: 139 LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYN 197
L ++ + + +P T + ++ +CV+ F A L ++ G + ++ S M GY
Sbjct: 277 LLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYC 336
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
L + +++++ G+V D + ++ K+GD EK L+ K + F
Sbjct: 337 VLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVF 396
Query: 258 STH-------------------------------MYKILCDSLGKSGRAFEALKFFRDMK 286
+ Y IL LG+ G+ EA + M
Sbjct: 397 IVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMV 456
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
KGI Y +LI + A + K E+G+ + L+ + ++G E
Sbjct: 457 SKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSE 516
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ V E M A + +D ++NG K I QG + +TY SII
Sbjct: 517 RAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSII 576
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
+ + + A + EM + G V+ Y+S++ K+ +I A+ + + MK KG +
Sbjct: 577 DGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMK 636
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
+V Y++L+D + ++ K + E+ +TP+ V Y ++IS + + +
Sbjct: 637 LDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNL 696
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ E N D + ++G K ++ + L +M S+ D +Y +N L +
Sbjct: 697 HQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSN 756
Query: 587 AGLQMQAQWLQQNFEGT 603
G A + + +G
Sbjct: 757 NGQLENASKILKEMDGN 773
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 162/370 (43%), Gaps = 3/370 (0%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+L+++N+ + G+ K + + + G+ ++ Y +++ ++K GDSE+ +F
Sbjct: 463 SLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVF 522
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ + + T H + + + LGK+GR E + ++G + Y S+I F
Sbjct: 523 EQMMAANIAPT---DHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGF 579
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
V A ++E E G+ D L+ + + L++ MK +K+
Sbjct: 580 FKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDV 639
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
A+++GF K +A K + +L+ G P V Y S+I+ + + A + E
Sbjct: 640 VAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQE 699
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M + + Y+S++ K G++ A+ L ++M +K P++ +Y L++
Sbjct: 700 MIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQ 759
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
L K+ KEM+ +TP + Y +I+ R + ++E G V D I
Sbjct: 760 LENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDI 819
Query: 545 MVGVFSKLSQ 554
+V K+S
Sbjct: 820 LVNGKLKVSH 829
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 150/346 (43%), Gaps = 3/346 (0%)
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPF--STHMYKILCDSLGKSGRAFEALKFFR 283
Q + Y GD+ A +F+EC F + ++ L S + + +A++ FR
Sbjct: 115 QFLLNNYVFGDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFR 174
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
M E ++ I +L+ + V A +L+ E E+G+ D ++ ++EG
Sbjct: 175 TMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEG 234
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
E+ + K L++ +V +R A ++ +++ G +P + TY
Sbjct: 235 KFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYT 294
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
++I A + + +A ++ EM G V+ S++ Y G + A+ L ++
Sbjct: 295 AVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEG 354
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
G P+V I++ L++ + ++ + +L+ M+ + P+ +++ ++ +
Sbjct: 355 GVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHA 414
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
++E + G+ + I++ +L ++ E L + M S+G
Sbjct: 415 YGLFDE-AVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKG 459
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/191 (19%), Positives = 80/191 (41%), Gaps = 3/191 (1%)
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
++ ++ R+ + A + F M + V ++++ + + DA L +M +G
Sbjct: 156 LLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERG 215
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+ + + +M + +VEK +KE + R + D +Y+ ++ A R + ++
Sbjct: 216 IYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLAC 275
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA- 583
+ E R G V + ++ K E ++L +M S G ++ + S M
Sbjct: 276 ELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGY 335
Query: 584 --LRDAGLQMQ 592
L D L +Q
Sbjct: 336 CVLGDVNLALQ 346
>gi|115479233|ref|NP_001063210.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|50725891|dbj|BAD33419.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|50726131|dbj|BAD33652.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113631443|dbj|BAF25124.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|125605742|gb|EAZ44778.1| hypothetical protein OsJ_29409 [Oryza sativa Japonica Group]
Length = 962
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 165/375 (44%), Gaps = 39/375 (10%)
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+ +K + F ++Y IL S ++G +A++ + M + + IY S+I F+ +
Sbjct: 565 REKKWKDSDFEDNLYHILICSCKEAGCCDDAVRIYNQMPKSATHPNLRIYCSMIDVFSIM 624
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI- 366
AE L+ E + + D +V MY + G E V+E M+ K + D
Sbjct: 625 ERFTDAEALYLELKASSCVLDMIAYSVIVRMYTKAGRPEDACLVLEDMEKQKEIVPDKYL 684
Query: 367 ---------SCAIVNGFSKRRGYW---------------------------AAVKVYEQL 390
C ++ S YW ++++++
Sbjct: 685 FLDMLRTYQKCGLLEKLSDTY-YWILKSQVELDEAMYNCIINCCGRAIPVDELSRIFDEM 743
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
I QG + VT +++ Y + L++KAEKVF+ +++G +++Y++++A + K G
Sbjct: 744 IQQGHLANTVTLNVLLDIYGKAGLFNKAEKVFLMARKQGMAD-IISYNTIIAAHAKNGDF 802
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
R ++ V +M+ G ++ YN ++D +G+A L + + ++MER D +Y +
Sbjct: 803 RSMIYFVQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIM 862
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
I+ Y R + E + GG D ++ + E+ VKL+Q+M+ +G
Sbjct: 863 INIYGRKGWIEGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGI 922
Query: 571 KLDERLYHSAMNALR 585
D Y + + AL+
Sbjct: 923 AADRVTYTNLIAALQ 937
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 209/497 (42%), Gaps = 76/497 (15%)
Query: 157 RLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSA 215
RL A C + K + A +L+ + +G + ++A+N+ + GY K+ + V++++KSA
Sbjct: 373 RLNAYCQQG-KMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSA 431
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
G+ D Y ++E + + D K A L+ K R P +++ Y ++ + L + +
Sbjct: 432 GLAPDETTYRSMIEGFGR-ADKYKQAILYYR-KLRNSGFKPNASNFYTMI-NLLARHDDS 488
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
A + DM+ G + SI L+ ++ S+ + ++ K K +L D C L
Sbjct: 489 EGATEILEDMRAAGC-QCSSIVTVLVRAYGSVGRMHKVLQILKACFYKKILFDATSCSIL 547
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
V +++ LVE+ + V+ K D + ++ + AV++Y Q+
Sbjct: 548 VTGFVQNSLVEEAMRVLREKKWKDSDFEDNLYHILICSCKEAGCCDDAVRIYNQMPKSAT 607
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P Y S+I+ + + ++ AE +++E++ ++AYS +V MY K GR DA
Sbjct: 608 HPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMIAYSVIVRMYTKAGRPEDACL 667
Query: 456 LVAKM-KAKGCEPN------------------------VWI-----------YNSLMDMH 479
++ M K K P+ WI YN +++
Sbjct: 668 VLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELDEAMYNCIINCC 727
Query: 480 GRAKNLRQVEKLWKE----------------------------------MERRKVTPDKV 505
GRA + ++ +++ E M R++ D +
Sbjct: 728 GRAIPVDELSRIFDEMIQQGHLANTVTLNVLLDIYGKAGLFNKAEKVFLMARKQGMADII 787
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
SY T+I+A+ + +F + F + G + M+ + K Q+EE +LQ M
Sbjct: 788 SYNTIIAAHAKNGDFRSMIYFVQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKM 847
Query: 566 KSEGTKLDERLYHSAMN 582
+ G + D Y+ +N
Sbjct: 848 ERAGCEFDHYTYNIMIN 864
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 149/320 (46%), Gaps = 5/320 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+Y ++K++ VLD Y I+ Y K G E A L LE ++ + P +++ +
Sbjct: 633 LYLELKASSCVLDMIAYSVIVRMYTKAGRPED-ACLVLEDMEKQKEIVP-DKYLFLDMLR 690
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ K G + + + + + D ++Y +I V +F E ++G L
Sbjct: 691 TYQKCGLLEKLSDTYYWILKSQVELDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLA 750
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ L+ +Y + GL K V + K ++D IS + + G + ++ +
Sbjct: 751 NTVTLNVLLDIYGKAGLFNKAEKVF--LMARKQGMADIISYNTIIAAHAKNGDFRSMIYF 808
Query: 388 EQLISQGCIPGQV-TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
Q + + P + Y +++AY + + V +M++ G + Y+ M+ +YG+
Sbjct: 809 VQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGR 868
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G I ++A++K++G EP+++ YN+L+ +G A KL +EM + + D+V+
Sbjct: 869 KGWIEGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGIAADRVT 928
Query: 507 YTTVISAYNRAREFDMCVKF 526
YT +I+A R F VK+
Sbjct: 929 YTNLIAALQRNENFLEAVKW 948
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 104/232 (44%), Gaps = 36/232 (15%)
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+KRR K ++ + P T ++ Y RI +AE F +M++ G KCV
Sbjct: 274 AKRRLVDWGTKWLHMMLERDVQPNVSTVGMLMGLYQRIGNLPEAEFTFAKMRKCGI-KCV 332
Query: 435 VAYSSMVAMYGKTGRIRDA-----------------MWLV--------AKMKA------- 462
AYS+MV +Y + G + WLV KM+
Sbjct: 333 NAYSAMVTLYTRLGHFAKSEEVITLMNNDEVVPNMENWLVRLNAYCQQGKMEEAELVLKS 392
Query: 463 ---KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
+G NV YN+++ +G+ ++++ +++ ++ + PD+ +Y ++I + RA +
Sbjct: 393 LVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRADK 452
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+ + +Y + R +G + + M+ + ++ E ++L+DM++ G +
Sbjct: 453 YKQAILYYRKLRNSGFKPNASNFYTMINLLARHDDSEGATEILEDMRAAGCQ 504
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 121/280 (43%), Gaps = 43/280 (15%)
Query: 352 VESMKNAKLKISDCISCAI--VNGFS------KRRGYWA-AVKVYEQLISQGCIPGQVTY 402
+ ++ A+ + C I VN +S R G++A + +V + + +P +
Sbjct: 311 IGNLPEAEFTFAKMRKCGIKCVNAYSAMVTLYTRLGHFAKSEEVITLMNNDEVVPNMENW 370
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+NAYC+ +AE V + +G VVAY++++ YGK ++ AM + ++K+
Sbjct: 371 LVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKS 430
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
G P+ Y S+++ GRA +Q ++++ P+ ++ T+I+ R + +
Sbjct: 431 AGLAPDETTYRSMIEGFGRADKYKQAILYYRKLRNSGFKPNASNFYTMINLLARHDDSEG 490
Query: 523 CVKFYNEFRMNGG----------------------------------VIDRAIAGIMVGV 548
+ + R G + D I+V
Sbjct: 491 ATEILEDMRAAGCQCSSIVTVLVRAYGSVGRMHKVLQILKACFYKKILFDATSCSILVTG 550
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
F + S +EE +++L++ K + + ++ LYH + + ++AG
Sbjct: 551 FVQNSLVEEAMRVLREKKWKDSDFEDNLYHILICSCKEAG 590
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 86/462 (18%), Positives = 177/462 (38%), Gaps = 67/462 (14%)
Query: 194 GGYNKLHMYYSTILVYEKMKSAG-----IVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
G H+ I E ++AG +V DSGC D++ L C
Sbjct: 225 GNAEAYHLALQAIAWKEDWEAAGQLLHEMVADSGCAL----------DAQAFNGLIYVCA 274
Query: 249 SRKL--------------DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
R+L D P + +L + G EA F M++ GI +
Sbjct: 275 KRRLVDWGTKWLHMMLERDVQP-NVSTVGMLMGLYQRIGNLPEAEFTFAKMRKCGI-KCV 332
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
+ Y++++ + + +EE+ ++ + E L + Y ++G +E+ V++S
Sbjct: 333 NAYSAMVTLYTRLGHFAKSEEVITLMNNDEVVPNMENWLVRLNAYCQQGKMEEAELVLKS 392
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
+ + + ++ ++ G+ K A++V+++L S G P + TY S+I + R
Sbjct: 393 LVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRADK 452
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
Y +A + +++ GF + +M+ + + A ++ M+A GC+ + I
Sbjct: 453 YKQAILYYRKLRNSGFKPNASNFYTMINLLARHDDSEGATEILEDMRAAGCQCSS-IVTV 511
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY-------------------- 514
L+ +G + +V ++ K +K+ D S + +++ +
Sbjct: 512 LVRAYGSVGRMHKVLQILKACFYKKILFDATSCSILVTGFVQNSLVEEAMRVLREKKWKD 571
Query: 515 ---------------NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
A D V+ YN+ + + I M+ VFS + + +
Sbjct: 572 SDFEDNLYHILICSCKEAGCCDDAVRIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAE 631
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
L ++K+ LD Y + AG A + ++ E
Sbjct: 632 ALYLELKASSCVLDMIAYSVIVRMYTKAGRPEDACLVLEDME 673
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 138/361 (38%), Gaps = 41/361 (11%)
Query: 144 KIYNVLPDAHTCSRLVASCVRARKFKIANTL-------LQVFITDGEIALLAFNSAMGGY 196
+IYN +P + T L C F I L++ + + ++A++ + Y
Sbjct: 597 RIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMIAYSVIVRMY 656
Query: 197 NKLHMYYSTILVYEKM-KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF----------- 244
K LV E M K IV D + ++ Y K G EK++ +
Sbjct: 657 TKAGRPEDACLVLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELD 716
Query: 245 -------LECKSRKLDSTPFS--------------THMYKILCDSLGKSGRAFEALKFFR 283
+ C R + S T +L D GK+G +A K F
Sbjct: 717 EAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLANTVTLNVLLDIYGKAGLFNKAEKVFL 776
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+++G + D Y ++I + A + + + +E G E ++ Y + G
Sbjct: 777 MARKQG-MADIISYNTIIAAHAKNGDFRSMIYFVQRMQEAGFPVSLEAYNCMLDAYGKAG 835
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
+E+ V++ M+ A + ++N + ++ V +L S+G P +Y
Sbjct: 836 QLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWIEGVANVLAELKSRGGEPDLYSYN 895
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
++I AY + A K+ EM+ KG V Y++++A + +A+ MK
Sbjct: 896 TLIKAYGIAGMPEDAVKLMQEMRIKGIAADRVTYTNLIAALQRNENFLEAVKWSLWMKQT 955
Query: 464 G 464
G
Sbjct: 956 G 956
>gi|410110099|gb|AFV61129.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
trifolia]
Length = 440
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 154/325 (47%), Gaps = 3/325 (0%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 1 GLFDEMRQRALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLI 57
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ A +F + G D ++ ++ + L + ++ MK A +
Sbjct: 58 ELSRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVM 117
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++ + + + + A+ V+ ++ C+ T +I+ Y ++ + +A+K+
Sbjct: 118 PNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M++ G + VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G+
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ +
Sbjct: 238 TLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQIL 297
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMK 566
M+ + + + +LL ++K
Sbjct: 298 FQTMIVAYERAGLVAHAKRLLHELK 322
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 151/319 (47%), Gaps = 6/319 (1%)
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
F +M+++ + D Y++LI F A ++ E+ + D + L+ +
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ K + + +K + A++N F K + + A + ++ G +P
Sbjct: 62 KXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNTA 121
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS---MVAMYGKTGRIRDAMWLV 457
+Y++++ Y + +A VF EM++ KC++ ++ M+ +YG+ G ++A L
Sbjct: 122 SYSTLLTMYVENKKFLEALSVFSEMREI---KCLLDLTTCNIMIDVYGQLGMAKEADKLF 178
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
M+ G EPNV YN+L+ ++G A+ + L++ M+R+ + + V+Y +++ Y +
Sbjct: 179 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 238
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
E + E + G + ++ ++ K+ +++ L Q ++S G ++D+ L+
Sbjct: 239 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILF 298
Query: 578 HSAMNALRDAGLQMQAQWL 596
+ + A AGL A+ L
Sbjct: 299 QTMIVAYERAGLVAHAKRL 317
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 166/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K D K ++F +L + F+ + Y + +
Sbjct: 39 QKMEQDRVPGDLVLYSNLIELSRKXCDYSKAISIF-----SRLKRSGFTPDLVAYNAMIN 93
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +MK G++ + + Y++L+ + + A +F E E L
Sbjct: 94 VFGKAKLFREARSLIGEMKXAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLL 153
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 154 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 213
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 214 RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV 273
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + ++ +++ + RA + ++L E++R PD +
Sbjct: 274 GKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKR----PDNIPR 329
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ + SK + +V++ M+
Sbjct: 330 DTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRG 389
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 390 LGYFPDSDVIAXVLNA 405
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 191/428 (44%), Gaps = 18/428 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVA----SCVRARKFKI 170
P++ T LI + + +D+ +S + + V D S L+ C ++ I
Sbjct: 13 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKXCDYSKAISI 72
Query: 171 ANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ L + T L+A+N+ + + K ++ + +MK AG++ ++ Y ++
Sbjct: 73 FSRLKRSGFTPD---LVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNTASYSTLLTM 129
Query: 231 YYKIGDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
Y + + ++F E + K LD T + I+ D G+ G A EA K F M++
Sbjct: 130 YVENKKFLEALSVFSEMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKM 184
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI + Y +L+ + A LF+ + K + ++ ++++Y + EK
Sbjct: 185 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 244
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
++++ M++ ++ + I++ + K A ++++L S G Q+ + ++I A
Sbjct: 245 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVA 304
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
Y R L + A+++ E+++ + + + + GRI +A ++ + G +
Sbjct: 305 YERAGLVAHAKRLLHELKRPD----NIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKD 360
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ ++ ++ + + K V +++ +M PD V++AY + +EFD Y
Sbjct: 361 ITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAXVLNAYGKLQEFDKANDVYM 420
Query: 529 EFRMNGGV 536
E + G V
Sbjct: 421 EMQEVGCV 428
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 142/355 (40%), Gaps = 47/355 (13%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA- 171
F P+ +I ++K + SL + K V+P+ + S L+ V +KF A
Sbjct: 81 FTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNTASYSTLLTMYVENKKFLEAL 140
Query: 172 ------------------NTLLQVFITDG-----------------EIALLAFNSAMGGY 196
N ++ V+ G E ++++N+ + Y
Sbjct: 141 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 200
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
++ I ++ M+ I + Y +M Y K + EK L E +SR ++
Sbjct: 201 GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNS 260
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y + GK G+ A F+ ++ G D ++ ++I ++ V A+ L
Sbjct: 261 IT---YSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRL 317
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E L+ P+ + ++I G +E+ V +A + +++
Sbjct: 318 LHE------LKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 371
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
SK + Y V+V++++ G P A ++NAY ++ + KA V++EMQ+ G
Sbjct: 372 SKYKKYSNVVEVFDKMRGLGYFPDSDVIAXVLNAYGKLQEFDKANDVYMEMQEVG 426
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 35/204 (17%)
Query: 196 YNKLHMYYSTILVYEK-------MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
YN + M Y L +EK M+S GI +S Y I+ + K+G ++ A LF + +
Sbjct: 228 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 287
Query: 249 S--RKLDSTPFST------------HMYKILCD--------------SLGKSGRAFEALK 280
S ++D F T H ++L + L +GR EA
Sbjct: 288 SSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATY 347
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
FR + G ++D +++ +I + + E+F + G D +V ++ Y
Sbjct: 348 VFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAXVLNAYG 407
Query: 341 EEGLVEKTLDVVESMKNAKLKISD 364
+ +K DV M+ SD
Sbjct: 408 KLQEFDKANDVYMEMQEVGCVFSD 431
>gi|255661168|gb|ACU25753.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 352
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 160/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTTSYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 98/193 (50%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTTSYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL 589
Y++ + DA L
Sbjct: 187 YNTLLRVYGDAEL 199
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 129/273 (47%), Gaps = 11/273 (4%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG+ ++ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTTSYSTLLTMYVENKKFLEALSVFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
E+++ +A + + GRI +A W+
Sbjct: 314 ELKRPDNIPRDIA----IHILAGAGRIEEATWV 342
>gi|255661160|gb|ACU25749.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 426
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 160/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDKAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 146/349 (41%), Gaps = 33/349 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G+ + L+ MY+E + L V M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDKAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
FR G V D + M+ +FSK + +V++ M+ G
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLG 385
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 162/353 (45%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG+ ++ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDKAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ +A + + GRI +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M P+ V++AY + EFD Y E + G V
Sbjct: 370 KYGNVVEVFDKMRGLGYFPESNVIALVLNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 143/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ +A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDKAAMLFQKLRSSGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDIAIHILAGAGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A ++NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPESNVIALVLNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANDVYMEMQEVG 420
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDKAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G + V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPESNVIALVLNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 189/442 (42%), Gaps = 8/442 (1%)
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAF 189
K + + VSLS ++ + PD T + L+ + ++L + G +
Sbjct: 73 KHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTL 132
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
N+ + G + ++K+ + G L+ Y ++ KIGD+ L +
Sbjct: 133 NTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDG 192
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
R T + MY + D+L K EA F +M KGI D Y++LI F +
Sbjct: 193 R---LTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGK 249
Query: 310 VKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+K A L E K + +P V +L+ +EG V++ V+ M A +K
Sbjct: 250 LKEAIGLLNEMVLKTI--NPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITY 307
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+++G+ A V+ + G P TY +IN +C+ + +A +F EM Q
Sbjct: 308 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQ 367
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
K +V YSS++ K+GRI L+ +M +G NV Y+SL+D + +L +
Sbjct: 368 KNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDR 427
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
L+ +M+ + + P+ ++T ++ + + + + G ++ +M+
Sbjct: 428 AIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMID 487
Query: 548 VFSKLSQIEELVKLLQDMKSEG 569
K +EE + +L M+ G
Sbjct: 488 GHCKQGLLEEALTMLSKMEDNG 509
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 151/334 (45%), Gaps = 1/334 (0%)
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
TP KIL DS K A+ ++ KGI D LI F + ++
Sbjct: 56 TPPIIQFNKIL-DSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
+ + ++G D L+ +G V+K L + + +++ ++NG
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGV 174
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K AA+K+ +++ + P V Y++II+A C+ L S+A +F EM KG V
Sbjct: 175 CKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V YS+++ + G++++A+ L+ +M K PNV+ YN L+D + +++ + +
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M + V PD ++Y+T++ Y E +N + G D I++ F K
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM 354
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
++E + L ++M + Y S ++ L +G
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 141/319 (44%), Gaps = 3/319 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++ +M GI D Y ++ + G ++ L E + ++ ++ Y IL D
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYT---YNILVD 277
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+L K G+ EA M + + D Y++L+ + + EVK A+ +F G+
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D L+ + + +V++ L++ + M + ++++G K +
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++ +G +TY+S+I+ C+ +A +F +M+ +G ++ ++ K
Sbjct: 398 DEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKG 457
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR++DA + + KG NV+ YN ++D H + L + + +ME PD V++
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTF 517
Query: 508 TTVISAYNRAREFDMCVKF 526
+I A + E V F
Sbjct: 518 EIIIIALFKKDENGGNVGF 536
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 2/259 (0%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
A+ ++ KGI D LI F + ++ + + ++G D L+
Sbjct: 945 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
+G V K L + + +++ ++NG K AA+K+ ++ + P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
V Y +II+A C+ L SKA +F EM KG VV Y++++ + G++++A+ L+
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124
Query: 458 AKMKAKGCEPNVWIYNSLMD-MHGRAKN-LRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
KM K PNV YN L+D + K+ L + + +ME + V++ +ISA
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184
Query: 516 RAREFDMCVKFYNEFRMNG 534
E D K +E G
Sbjct: 1185 EKDENDKVEKLLHEMIARG 1203
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/424 (18%), Positives = 170/424 (40%), Gaps = 21/424 (4%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD-------SGCYCQIMEAYYKIGDSE 238
++ FN + + K+ Y + + + +++ GI D C+C + + +
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF---- 114
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
V A L+ + D+ +T + K LC G+ +AL F + +G + Y
Sbjct: 115 SVLAKILK-RGYPPDTVTLNT-LIKGLC----LKGQVKKALHFHDKLLAQGFQLNQVSYG 168
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKTLDVVESMK 356
+LI I + + A +L ++ + G L P V + ++ + LV + + M
Sbjct: 169 TLINGVCKIGDTRAAIKLLQKID--GRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMT 226
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ ++ GF A+ + +++ + P TY +++A C+
Sbjct: 227 VKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+A+ V M + V+ YS+++ Y ++ A + M G P+V Y L+
Sbjct: 287 EAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+ + K + + L+KEM ++ + P V+Y+++I ++ +E G
Sbjct: 347 NGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQP 406
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ ++ K ++ + L MK +G + + + ++ L G AQ +
Sbjct: 407 ANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEV 466
Query: 597 QQNF 600
Q+
Sbjct: 467 FQDL 470
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 94/209 (44%)
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
Y AV + +L +G P T +IN +C + + + ++ ++G+ + +++
Sbjct: 942 YSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTT 1001
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ G++ A+ K+ A+G + N Y +L++ + + R KL ++++ R
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
PD V Y T+I A + + + E + G D ++ F + +++E +
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAG 588
LL M + + R Y+ ++AL G
Sbjct: 1122 GLLNKMVLKTINPNVRTYNILVDALCKEG 1150
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 10/271 (3%)
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAF 189
K + + VSLS ++ + PD T + L+ + ++L + G + F
Sbjct: 940 KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
+ + G + ++K+ + G L+ Y ++ KIGD+ L
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLL----- 1054
Query: 250 RKLDS--TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
RK+D T MY + D+L K +A F +M KGI D Y +LI F +
Sbjct: 1055 RKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIV 1114
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG--LVEKTLDVVESMKNAKLKISDC 365
++K A L + K + + LV +EG L++++L ++ M++ K +
Sbjct: 1115 GKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAV 1174
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
I++ ++ K+ ++I++G +
Sbjct: 1175 TFEIIISALFEKDENDKVEKLLHEMIARGLL 1205
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/471 (20%), Positives = 203/471 (43%), Gaps = 24/471 (5%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA--MGGYNKLHMYY 203
N P A ++++ S V+++ + +L Q +G L F + GY+ + +
Sbjct: 71 NPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITF 130
Query: 204 STI--------------LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
+T+ L ++ + + G LD Y ++ K+G++ L
Sbjct: 131 TTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLL----- 185
Query: 250 RKLDSTPFSTH--MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
R++D + MY + D + K +A + +M KGI + Y++LI F ++
Sbjct: 186 RRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTV 245
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++K A +LF + + + D LV + ++G +++ V M +K +
Sbjct: 246 GQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTY 305
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
C++++G+ + A + + +G P +Y +I+ +C+I +A +F EM
Sbjct: 306 CSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHH 365
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
K VV Y+S++ K G+I A+ LV +M +G P++ Y+S++D + + +
Sbjct: 366 KHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDK 425
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
L +++ + + P+ +YT +I + + + + + G I +M+
Sbjct: 426 AIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIH 485
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
F +E + LL MK D Y + +L D +A+ L++
Sbjct: 486 GFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLRE 536
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/475 (21%), Positives = 192/475 (40%), Gaps = 11/475 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T L I+ L Q + D V + PD T + L+ + KF+ A
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L + +G E +N+ + GY K M + G V D Y +++
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G++ + ALF E + + + +Y L L G EA + +M EKG++ +
Sbjct: 369 EGETNRALALFNEALGKGIKP---NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ L+ + V A+ L K KG D L+ Y + +E L++++
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M + + +++NG K + ++ Y+ ++ +GC P T+ ++ + CR
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 545
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK-AKGCEPNVWIY 472
+A + EM+ K + V + +++ + K G + A L KM+ A + Y
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY 605
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N ++ N+ EKL++EM R + PD +Y ++ + + ++ KF E
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
NG + G ++ ++ E ++ M +G L A+N + D
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG------LVPEAVNTICDV 714
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/475 (18%), Positives = 199/475 (41%), Gaps = 4/475 (0%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + ++ LV S +D + + + PD ++ + + S + + A L
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L + G E+ ++A+ + +GG+ + + ++ KM ++G+ L + +++ K
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
GD ++ L + R + F+ Y + L + G A++ + E+G D
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFT---YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPD 285
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y +LI ++ + AE + +G+ D L+ Y + G+V+ +V
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
++++G A+ ++ + + +G P + Y ++I
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ +A ++ EM +KG V ++ +V K G + DA LV M +KG P+++ +N
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
L+ + + ++ M V PD +Y ++++ + +F+ ++ Y
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G + I++ + +++E + LL++MK++ D + + ++ G
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/377 (19%), Positives = 154/377 (40%), Gaps = 7/377 (1%)
Query: 222 GCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
G Y M+ Y + G ++ +F + T FS Y + L SG +A K
Sbjct: 77 GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFS---YNAIMSVLVDSGYFDQAHKV 133
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+ M+++GI D + + SF + A L +G + +V + E
Sbjct: 134 YMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISC--AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
E + ++ M + +S C+S ++ K+ K+ +++I +G +P
Sbjct: 194 ENFKAEGYELFGKMLASG--VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNL 251
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
TY I C+ A ++ + ++G V+ Y++++ K + ++A + K
Sbjct: 252 FTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGK 311
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M +G EP+ + YN+L+ + + ++ E++ + PD+ +Y ++I E
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ + +NE G + + ++ S I E +L +M +G + + ++
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 580 AMNALRDAGLQMQAQWL 596
+N L G A L
Sbjct: 432 LVNGLCKMGCVSDADGL 448
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 155/345 (44%), Gaps = 1/345 (0%)
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
S+ L+ P + + ++ ++ + G +A++ FR++ + D Y++L+
Sbjct: 161 SKSLNIHP-NALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEE 219
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ A L E + +G + L+ ++G + + +V++M ++
Sbjct: 220 RIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYN 279
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
A+V+G + AV + Q++S C+P VT+ ++IN + S +V + ++ +
Sbjct: 280 ALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEAR 339
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G YSS+++ K G+ AM L +M KGC PN +Y++L+D R L +
Sbjct: 340 GHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEA 399
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
EM+ + P+ +Y++++ Y A + + + E N + + I++
Sbjct: 400 RGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILING 459
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
K + E + + + M S G KLD Y S ++ +A L Q
Sbjct: 460 LCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQG 504
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 186/415 (44%), Gaps = 20/415 (4%)
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
N++L V + +G FN A+ YN H+ S KS I ++ + +++A
Sbjct: 136 NSVLNVIVQEG-----LFNRALEFYN--HVVAS--------KSLNIHPNALTFNLVIKAM 180
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
++G +K +F E R + P + Y L L K R EA+ +M+ +G
Sbjct: 181 CRLGLVDKAIEVFREIPLR--NCAP-DNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTF 237
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ + LI + ++ A +L KG + + LV +G +EK + +
Sbjct: 238 PNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSL 297
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+ M + K +D ++NGF + +V L ++G + Y+S+I+ C+
Sbjct: 298 LNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCK 357
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+++A +++ EM KG + YS+++ + G++ +A +++MK KG PN +
Sbjct: 358 EGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFT 417
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y+SLM + A + + +WKEM ++V Y+ +I+ + +F + + +
Sbjct: 418 YSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQML 477
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG--TKLDERLYHSAMNAL 584
G +D M+ F + +E+ +KL M +G + D Y+ +NA
Sbjct: 478 SRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAF 532
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 169/400 (42%), Gaps = 27/400 (6%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF------LECKSRKLDSTPFSTHM 261
V +MK V + + +AY K EK LF +CK +
Sbjct: 83 VLHQMKRERRVFLEKNFIVMFKAYGKAHLPEKAVDLFHRMWGEFQCKQ--------TVKS 134
Query: 262 YKILCDSLGKSGRAFEALKFFRDM---KEKGILEDPSIYASLICSFASITEVKLAEELFK 318
+ + + + + G AL+F+ + K I + + +I + + V A E+F+
Sbjct: 135 FNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFR 194
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E + D L+ +E +++ + +++ M+ + +++ K+
Sbjct: 195 EIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKG 254
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV---V 435
A K+ + + +GC+P +VTY ++++ C L K EK + Q +KCV V
Sbjct: 255 DLGRAAKLVDNMFLKGCVPNEVTYNALVHGLC---LKGKLEKAVSLLNQMVSNKCVPNDV 311
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+ +++ + GR D ++ ++A+G N ++Y+SL+ + Q +LWKEM
Sbjct: 312 TFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEM 371
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI--AGIMVGVFSKLS 553
+ P+ + Y+ +I R + D F +E + N G + + + +M G F
Sbjct: 372 VGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK-NKGYLPNSFTYSSLMRGYFEA-G 429
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ + + ++M + +E Y +N L G M+A
Sbjct: 430 DSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEA 469
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 145/326 (44%), Gaps = 25/326 (7%)
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK--LVLMYIEEG---LV 345
L D S Y SLI S AS + + EE+ + M R+ V L+ ++M+ G L
Sbjct: 59 LGDLSFY-SLIESHASSLDFRSLEEVLHQ-----MKRERRVFLEKNFIVMFKAYGKAHLP 112
Query: 346 EKTLDVVESM------KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI--- 396
EK +D+ M K + ++ + G R A++ Y +++ +
Sbjct: 113 EKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNR-----ALEFYNHVVASKSLNIH 167
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P +T+ +I A CR+ L KA +VF E+ + YS+++ K RI +A+ L
Sbjct: 168 PNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSL 227
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ +M+ +G PN+ +N L+ + +L + KL M + P++V+Y ++
Sbjct: 228 LDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCL 287
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ + V N+ N V + G ++ F + + ++L +++ G + +E +
Sbjct: 288 KGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYV 347
Query: 577 YHSAMNALRDAGLQMQAQWLQQNFEG 602
Y S ++ L G QA L + G
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVG 373
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 170/407 (41%), Gaps = 43/407 (10%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
IE+ R+ + PD + + +HG+ K+ + E A +E + F P +LI
Sbjct: 190 IEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDE-AVSLLDEMQVEGTF-PNLVAFNVLI 247
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
L + L ++ + +P+ T + LV K + A +LL +++ +
Sbjct: 248 SALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCV 307
Query: 185 AL-LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
+ F + + G+ +M+ + D +V +
Sbjct: 308 PNDVTFGTLINGF------------------------------VMQG--RASDGTRV-LV 334
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
LE + + + ++Y L L K G+ +A++ +++M KG + +Y++LI
Sbjct: 335 SLEARGHRGNE-----YVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDG 389
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
++ A E + KG L + L+ Y E G K + V + M N +
Sbjct: 390 LCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHN 449
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+ ++NG K + A+ V++Q++S+G V Y+S+I+ +C L + K+F
Sbjct: 450 EVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFN 509
Query: 424 EMQQKG--FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+M +G V+ Y+ ++ + I A+ ++ M +GC+P+
Sbjct: 510 QMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPD 556
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 36/191 (18%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
+MK+ G + +S Y +M Y++ GDS K ++ E + ++ + Y IL + L
Sbjct: 405 EMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMAN---NNCIHNEVCYSILINGLC 461
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
K G+ EAL ++ M +GI D Y+S+I F + V+ +LF + +G + P+
Sbjct: 462 KDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPD 521
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
V +L+ N F ++ + A+ + +
Sbjct: 522 VITYNILL---------------------------------NAFCIQKSIFRAIDILNIM 548
Query: 391 ISQGCIPGQVT 401
+ QGC P +T
Sbjct: 549 LDQGCDPDFIT 559
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 157/334 (47%), Gaps = 13/334 (3%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
L+ FN+ + G + ++++M G D Y I+ K+G++ AL
Sbjct: 9 TLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNT--TMALQ 66
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
L K + P + Y + DSL K EA+ FF +M ++GI D Y+S++ F
Sbjct: 67 LLKKMEEKGCKP-NVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD-----VVESMKNAK 359
++ V A LFK+ E+ ++ + K+ + +GL +K + V E+M
Sbjct: 126 CNLGRVNEATSLFKQMVERNVIPN-----KVTFTILIDGLCKKRMISEAWLVFETMTEKG 180
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
L+ A+V+G+ R A K++ + +GC P +Y +IN +C+ +A+
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
+ EM K + YS+++ + + GR ++A L+ +M + G PN+ Y+ ++D
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ +L + +L K M+ K+ P+ YT +I
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEG 334
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
I+NG K A+++ +++ +GC P V Y +II++ C+ L ++A F EM ++
Sbjct: 50 TIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKE 109
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G V YSS++ + GR+ +A L +M + PN + L+D + + + +
Sbjct: 110 GIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEA 169
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+++ M + + PD +Y ++ Y + D K +N G + I++
Sbjct: 170 WLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILING 229
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
K +I+E LL +M + D Y + M G +AQ L
Sbjct: 230 HCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQEL 277
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 4/194 (2%)
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G P VT+ ++++ C A A K+F EM + G + V+ YS+++ K G A
Sbjct: 5 GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ L+ KM+ KGC+PNV YN+++D + + + + + EM + + PD +Y++++
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ + + + + ++ I++ K I E + + M +G + D
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184
Query: 574 ERLYHSAMNALRDA 587
Y NAL D
Sbjct: 185 VYTY----NALVDG 194
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%)
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M + G +V ++++++ +I DA+ L +M G EP+V Y+++++ + N
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+L K+ME + P+ V+Y T+I + + R + F++E G D
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 545 MVGVFSKLSQIEELVKLLQDM 565
++ F L ++ E L + M
Sbjct: 121 ILHGFCNLGRVNEATSLFKQM 141
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 185/418 (44%), Gaps = 44/418 (10%)
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE 183
I L S+++D + E NV PD TC+ L+ + +A + A + ++F
Sbjct: 280 ISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGR--SAKEVWEIF----- 332
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
EKM G+ + +++++ G E+ +
Sbjct: 333 --------------------------EKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVI 366
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + + + S +T +Y L D+ KS E F +M++KG+ + Y L+ +
Sbjct: 367 QTEMEKKGIRS---NTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDA 423
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES----MKNAK 359
+A + + E L +E E+ G+ + + L+ Y G +K D+ MK
Sbjct: 424 YARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAY---GRTKKMSDMAADAFLRMKKVG 480
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
LK S A+++ +S + A +E++ +G P TY S+++A+ R K
Sbjct: 481 LKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLM 540
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
+++ M ++ + Y++++ + K G +A +V++ G +P+V YN LM+ +
Sbjct: 541 EIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAY 600
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
R ++ +L KEM + PD ++Y+T+I A+ R R+F FY++ + G +
Sbjct: 601 ARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAF-FYHKMMVKSGQV 657
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 156/348 (44%), Gaps = 18/348 (5%)
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS--FASITEVKLAEE---LFKEAEEK 323
+G+SG L F+ M L++PS+ + CS F + ++A+ L +K
Sbjct: 212 MGESGFVKSCLYFYEWMS----LQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDK 267
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA- 382
RD + + + +V E+M + D ++CAI+ ++ G A
Sbjct: 268 EEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINV-YPDNVTCAILITTLRKAGRSAK 326
Query: 383 -AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+++E++ +G Q + ++ ++C L +A + EM++KG + Y++++
Sbjct: 327 EVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLM 386
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y K+ I + L +M+ KG +P+ YN LMD + R VE L +EME +
Sbjct: 387 DAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLE 446
Query: 502 PDKVSYTTVISAYNRAREF-DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
P+ SYT +ISAY R ++ DM + + G ++ +S E+
Sbjct: 447 PNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYA 506
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAG-----LQMQAQWLQQNFEGT 603
++M EG K Y S ++A R +G +++ L++ +GT
Sbjct: 507 SFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGT 554
>gi|125563762|gb|EAZ09142.1| hypothetical protein OsI_31412 [Oryza sativa Indica Group]
Length = 962
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 165/375 (44%), Gaps = 39/375 (10%)
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+ +K + F ++Y IL S ++G +A++ + M + + IY S+I F+ +
Sbjct: 565 REKKWKDSDFEDNLYHILICSCKEAGCCDDAVRIYNQMPKSATHPNLRIYCSMIDVFSIM 624
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI- 366
AE L+ E + + D +V MY + G E V+E M+ K + D
Sbjct: 625 ERFTDAEALYLELKASSCVLDMIAYSVIVRMYTKAGRPEDACLVLEDMEKQKEIVPDKYL 684
Query: 367 ---------SCAIVNGFSKRRGYW---------------------------AAVKVYEQL 390
C ++ S YW ++++++
Sbjct: 685 FLDMLRTYQKCGLLEKLSDTY-YWILKSQVELDEAMYNCIINCCGRAIPVDELSRIFDEM 743
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
I QG + VT +++ Y + L++KAEKVF+ +++G +++Y++++A + K G
Sbjct: 744 IQQGHLANTVTLNVLLDIYGKAGLFNKAEKVFLMARKQGMAD-IISYNTIIAAHAKNGDF 802
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
R ++ V +M+ G ++ YN ++D +G+A L + + ++MER D +Y +
Sbjct: 803 RSMIYFVQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIM 862
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
I+ Y R + E + GG D ++ + E+ VKL+Q+M+ +G
Sbjct: 863 INIYGRKGWIEGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGI 922
Query: 571 KLDERLYHSAMNALR 585
D Y + + AL+
Sbjct: 923 AADRVTYTNLIAALQ 937
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 209/497 (42%), Gaps = 76/497 (15%)
Query: 157 RLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSA 215
RL A C + K + A +L+ + +G + ++A+N+ + GY K+ + V++++KSA
Sbjct: 373 RLNAYCQQG-KMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSA 431
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
G+ D Y ++E + + D K A L+ K R P +++ Y ++ + L + +
Sbjct: 432 GLAPDETTYRSMIEGFGR-ADKYKQAILYYR-KLRNSGFKPNASNFYTMI-NLLARHDDS 488
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
A + DM+ G + SI L+ ++ S+ + ++ K K +L D C L
Sbjct: 489 EGATEILEDMRAAGC-QCSSIVTVLVRAYGSVGRMHKVLQILKACFYKKILFDATSCSIL 547
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
V +++ LVE+ + V+ K D + ++ + AV++Y Q+
Sbjct: 548 VTGFVQNSLVEEAMRVLREKKWKDSDFEDNLYHILICSCKEAGCCDDAVRIYNQMPKSAT 607
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P Y S+I+ + + ++ AE +++E++ ++AYS +V MY K GR DA
Sbjct: 608 HPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMIAYSVIVRMYTKAGRPEDACL 667
Query: 456 LVAKM-KAKGCEPN------------------------VWI-----------YNSLMDMH 479
++ M K K P+ WI YN +++
Sbjct: 668 VLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELDEAMYNCIINCC 727
Query: 480 GRAKNLRQVEKLWKE----------------------------------MERRKVTPDKV 505
GRA + ++ +++ E M R++ D +
Sbjct: 728 GRAIPVDELSRIFDEMIQQGHLANTVTLNVLLDIYGKAGLFNKAEKVFLMARKQGMADII 787
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
SY T+I+A+ + +F + F + G + M+ + K Q+EE +LQ M
Sbjct: 788 SYNTIIAAHAKNGDFRSMIYFVQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKM 847
Query: 566 KSEGTKLDERLYHSAMN 582
+ G + D Y+ +N
Sbjct: 848 ERAGCEFDHYTYNIMIN 864
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 149/320 (46%), Gaps = 5/320 (1%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+Y ++K++ VLD Y I+ Y K G E A L LE ++ + P +++ +
Sbjct: 633 LYLELKASSCVLDMIAYSVIVRMYTKAGRPED-ACLVLEDMEKQKEIVP-DKYLFLDMLR 690
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ K G + + + + + D ++Y +I V +F E ++G L
Sbjct: 691 TYQKCGLLEKLSDTYYWILKSQVELDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLA 750
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ L+ +Y + GL K V + K ++D IS + + G + ++ +
Sbjct: 751 NTVTLNVLLDIYGKAGLFNKAEKVF--LMARKQGMADIISYNTIIAAHAKNGDFRSMIYF 808
Query: 388 EQLISQGCIPGQV-TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
Q + + P + Y +++AY + + V +M++ G + Y+ M+ +YG+
Sbjct: 809 VQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGR 868
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
G I ++A++K++G EP+++ YN+L+ +G A KL +EM + + D+V+
Sbjct: 869 KGWIEGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGIAADRVT 928
Query: 507 YTTVISAYNRAREFDMCVKF 526
YT +I+A R F VK+
Sbjct: 929 YTNLIAALQRNENFLEAVKW 948
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 104/232 (44%), Gaps = 36/232 (15%)
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+KRR K ++ + P T ++ Y RI +AE F +M++ G KCV
Sbjct: 274 AKRRLVDWGTKWLHMMLERDVQPNVSTVGMLMGLYQRIGNLPEAEFTFAKMRKCGI-KCV 332
Query: 435 VAYSSMVAMYGKTGRIRDA-----------------MWLV--------AKMKA------- 462
AYS+MV +Y + G + WLV KM+
Sbjct: 333 NAYSAMVTLYTRLGHFAKSEEVITLMNNDEVVPNMENWLVRLNAYCQQGKMEEAELVLKS 392
Query: 463 ---KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
+G NV YN+++ +G+ ++++ +++ ++ + PD+ +Y ++I + RA +
Sbjct: 393 LVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRADK 452
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+ + +Y + R +G + + M+ + ++ E ++L+DM++ G +
Sbjct: 453 YKQAILYYRKLRNSGFKPNASNFYTMINLLARHDDSEGATEILEDMRAAGCQ 504
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 121/280 (43%), Gaps = 43/280 (15%)
Query: 352 VESMKNAKLKISDCISCAI--VNGFS------KRRGYWA-AVKVYEQLISQGCIPGQVTY 402
+ ++ A+ + C I VN +S R G++A + +V + + +P +
Sbjct: 311 IGNLPEAEFTFAKMRKCGIKCVNAYSAMVTLYTRLGHFAKSEEVITLMNNDEVVPNMENW 370
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
+NAYC+ +AE V + +G VVAY++++ YGK ++ AM + ++K+
Sbjct: 371 LVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKS 430
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
G P+ Y S+++ GRA +Q ++++ P+ ++ T+I+ R + +
Sbjct: 431 AGLAPDETTYRSMIEGFGRADKYKQAILYYRKLRNSGFKPNASNFYTMINLLARHDDSEG 490
Query: 523 CVKFYNEFRMNGG----------------------------------VIDRAIAGIMVGV 548
+ + R G + D I+V
Sbjct: 491 ATEILEDMRAAGCQCSSIVTVLVRAYGSVGRMHKVLQILKACFYKKILFDATSCSILVTG 550
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
F + S +EE +++L++ K + + ++ LYH + + ++AG
Sbjct: 551 FVQNSLVEEAMRVLREKKWKDSDFEDNLYHILICSCKEAG 590
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 86/462 (18%), Positives = 177/462 (38%), Gaps = 67/462 (14%)
Query: 194 GGYNKLHMYYSTILVYEKMKSAG-----IVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
G H+ I E ++AG +V DSGC D++ L C
Sbjct: 225 GNAEAYHLALQAIAWKEDWEAAGQLLHEMVADSGCAL----------DAQAFNGLIYVCA 274
Query: 249 SRKL--------------DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
R+L D P + +L + G EA F M++ GI +
Sbjct: 275 KRRLVDWGTKWLHMMLERDVQP-NVSTVGMLMGLYQRIGNLPEAEFTFAKMRKCGI-KCV 332
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
+ Y++++ + + +EE+ ++ + E L + Y ++G +E+ V++S
Sbjct: 333 NAYSAMVTLYTRLGHFAKSEEVITLMNNDEVVPNMENWLVRLNAYCQQGKMEEAELVLKS 392
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
+ + + ++ ++ G+ K A++V+++L S G P + TY S+I + R
Sbjct: 393 LVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRADK 452
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
Y +A + +++ GF + +M+ + + A ++ M+A GC+ + I
Sbjct: 453 YKQAILYYRKLRNSGFKPNASNFYTMINLLARHDDSEGATEILEDMRAAGCQCSS-IVTV 511
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY-------------------- 514
L+ +G + +V ++ K +K+ D S + +++ +
Sbjct: 512 LVRAYGSVGRMHKVLQILKACFYKKILFDATSCSILVTGFVQNSLVEEAMRVLREKKWKD 571
Query: 515 ---------------NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
A D V+ YN+ + + I M+ VFS + + +
Sbjct: 572 SDFEDNLYHILICSCKEAGCCDDAVRIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAE 631
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
L ++K+ LD Y + AG A + ++ E
Sbjct: 632 ALYLELKASSCVLDMIAYSVIVRMYTKAGRPEDACLVLEDME 673
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 138/361 (38%), Gaps = 41/361 (11%)
Query: 144 KIYNVLPDAHTCSRLVASCVRARKFKIANTL-------LQVFITDGEIALLAFNSAMGGY 196
+IYN +P + T L C F I L++ + + ++A++ + Y
Sbjct: 597 RIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMIAYSVIVRMY 656
Query: 197 NKLHMYYSTILVYEKM-KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF----------- 244
K LV E M K IV D + ++ Y K G EK++ +
Sbjct: 657 TKAGRPEDACLVLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELD 716
Query: 245 -------LECKSRKLDSTPFS--------------THMYKILCDSLGKSGRAFEALKFFR 283
+ C R + S T +L D GK+G +A K F
Sbjct: 717 EAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLANTVTLNVLLDIYGKAGLFNKAEKVFL 776
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+++G + D Y ++I + A + + + +E G E ++ Y + G
Sbjct: 777 MARKQG-MADIISYNTIIAAHAKNGDFRSMIYFVQRMQEAGFPVSLEAYNCMLDAYGKAG 835
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
+E+ V++ M+ A + ++N + ++ V +L S+G P +Y
Sbjct: 836 QLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWIEGVANVLAELKSRGGEPDLYSYN 895
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
++I AY + A K+ EM+ KG V Y++++A + +A+ MK
Sbjct: 896 TLIKAYGIAGMPEDAVKLMQEMRIKGIAADRVTYTNLIAALQRNENFLEAVKWSLWMKQT 955
Query: 464 G 464
G
Sbjct: 956 G 956
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 178/388 (45%), Gaps = 9/388 (2%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+L+ L + ++ D + +D K+ + PD +T + ++ + + + + L + +T
Sbjct: 274 MLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTK 333
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G L+A+N+ + +K M IL++ M + Y I+ G ++
Sbjct: 334 GCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRL 393
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
+ LE ++ ++ + +Y L +L K G + EA + F +M D Y S+
Sbjct: 394 DEV-LEVSNKFINKS-----IYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISM 447
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ S + A EL + EKG+ D + ++ + V D+ E MK
Sbjct: 448 LESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDG- 506
Query: 361 KISDCISCAIVNGFSKRRG-YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
D + I+ R G AV+V+E+L S C P ++Y S+IN + +A
Sbjct: 507 PFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAH 566
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
F+EMQ KG + VV YS+++ +GKT ++ A L +M +GC PN+ YN L+D
Sbjct: 567 MRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCL 626
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSY 507
RA + L+ ++ + +TPD ++Y
Sbjct: 627 ERAGRTAETVDLYAKLREQGLTPDSITY 654
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 168/382 (43%), Gaps = 8/382 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY +M S G LD Y +++A K ++ +F K KL + Y I+
Sbjct: 256 VYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVF---KDMKLKHCNPDEYTYTIMIR 312
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK GRA E+L F +M KG + Y ++I + + V A LF K R
Sbjct: 313 MTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMI-KNNCR 371
Query: 328 DPEVCLKLVL-MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
E ++L + + EG + + +V+E I+ I +V SK A ++
Sbjct: 372 PNEFTYSIILNVLVAEGQLGRLDEVLEVSNKF---INKSIYAYLVRTLSKLGHSSEAHRL 428
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ + S + Y S++ + CR +A ++ ++ +KG + Y+++++ GK
Sbjct: 429 FCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGK 488
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
++ L KMK G P+++ YN L+ GR +++ ++++E+E PD +S
Sbjct: 489 LKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIIS 548
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y ++I+ + + D + E + G D ++ F K ++E L M
Sbjct: 549 YNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMI 608
Query: 567 SEGTKLDERLYHSAMNALRDAG 588
++G + Y+ ++ L AG
Sbjct: 609 TQGCCPNIVTYNILLDCLERAG 630
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 97/230 (42%), Gaps = 3/230 (1%)
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
D Y ++E+ + G + + L + + + + T MY + +LGK +
Sbjct: 440 DRDAYISMLESLCRGGKTVEAIELLSKVHEKGIST---DTMMYNTVLSTLGKLKQVSHLH 496
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
+ MK+ G D Y LI S + +VK A E+F+E E D L+
Sbjct: 497 DLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCL 556
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ G V++ M++ L ++ F K A +++++I+QGC P
Sbjct: 557 GKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNI 616
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
VTY +++ R ++ ++ +++++G + Y+ + + + R
Sbjct: 617 VTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITYAILDRLQSGSNR 666
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 143/304 (47%), Gaps = 3/304 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ KMK + D Y +++ + GDS+ V ++ + K D + Y + D
Sbjct: 287 VFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIW---NAMKADGYNDNVVAYTAVID 343
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+L + GR FEAL+ F +MK+KGI+ + Y SLI F A ELFK + G
Sbjct: 344 ALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKP 403
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ + + Y + G K + E MK+ + A++ G +K A +V+
Sbjct: 404 NGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVF 463
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+L + G P +TY +I + + + +A K+F +M + V+A +S++ K
Sbjct: 464 HELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKA 523
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR +A + ++K EP YN+L+ GR +++V L +EM P+ ++Y
Sbjct: 524 GRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITY 583
Query: 508 TTVI 511
T++
Sbjct: 584 NTIL 587
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 119/529 (22%), Positives = 221/529 (41%), Gaps = 14/529 (2%)
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
D VPD +S + + K + E A+ + + K++ P T L+ L +
Sbjct: 500 DMIENNCVPDVLAVNSLIDTLYKAGRGDE-AWRIFYQLKEM-NLEPTDGTYNTLLAGLGR 557
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLA 188
K ++ L E+ N P+ T + ++ + A +L T G I L +
Sbjct: 558 EGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSS 617
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL----F 244
+N+ + G K Y ++ +MK ++ D C I+ ++ KIG ++ + F
Sbjct: 618 YNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYF 676
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
L+ S K D + + M IL K ++++F + GI D LI
Sbjct: 677 LQPGS-KTDRSSCHSLMEGIL-----KKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHL 730
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ A EL K+ + G+ + L+ ++E L++ + MK +
Sbjct: 731 CKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDE 790
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++ K +KV E++ +G VTY +II+ + +A ++
Sbjct: 791 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 850
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+ +GF Y ++ K GRI DA L +M GC+ N IYN L++ H A N
Sbjct: 851 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 910
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+V L+++M + + PD SYT +I +A + + + ++ + G D +
Sbjct: 911 TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNL 970
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
++ K ++EE V L +M+ +G + Y+S + L AG +A
Sbjct: 971 LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEA 1019
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 187/425 (44%), Gaps = 18/425 (4%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
F + GG S + MK AGIVL++ Y ++ K G + ++ +
Sbjct: 128 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY---R 184
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+D S Y +L + GK L R+M+ G+ P++Y+ IC +
Sbjct: 185 VMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGV--KPNVYSYTIC-IRVLG 241
Query: 309 EVKLAEELFK---EAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKIS 363
+ K +E ++ + E +G P+V VL+ + + G + DV MK + K
Sbjct: 242 QAKRFDEAYRILAKMENEGC--KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 299
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+++ F + ++++ + + G V Y ++I+A C++ +A ++F
Sbjct: 300 RVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFD 359
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM+QKG +Y+S+++ + K R DA+ L M G +PN + + ++ +G++
Sbjct: 360 EMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSG 419
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ + ++ M+ + + PD V+ V+ ++ M + ++E + G D
Sbjct: 420 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 479
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA-----QWLQQ 598
+M+ SK S+ +E VK+ DM D +S ++ L AG +A Q +
Sbjct: 480 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM 539
Query: 599 NFEGT 603
N E T
Sbjct: 540 NLEPT 544
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 197/463 (42%), Gaps = 14/463 (3%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+PD +++ ++G++K+ + E A+ + + KK+ P+ +TL ++ V+
Sbjct: 612 IPDLSSYNTVIYGLVKEERYNE-AFSIFCQMKKV--LIPDYATLCTILPSFVKIGLMKEA 668
Query: 137 VSLSEDFKIY-NVLPDAHTCSRLVASCVR----ARKFKIANTLLQVFITDGEIALLAFNS 191
+ + +D+ + D +C L+ ++ + + A + IT + L
Sbjct: 669 LHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIK 728
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ K + + +K KS G+ L +G Y ++ + LF E K
Sbjct: 729 HLCKQKKALEAHELV---KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 785
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
F+ Y +L D++GKS R E LK +M KG Y ++I ++
Sbjct: 786 CGPDEFT---YNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLE 842
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A +L+ +G P L+ ++ G +E ++ M K + I ++
Sbjct: 843 QAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILL 902
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
NG +++ ++ QG P +Y II+ C+ + F ++ + G +
Sbjct: 903 NGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLE 962
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
++ Y+ ++ GK+ R+ +A+ L +M+ KG PN++ YNSL+ G+A + K+
Sbjct: 963 PDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKM 1022
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
++E+ + P+ +Y +I Y+ + D Y + G
Sbjct: 1023 YEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGG 1065
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 170/381 (44%), Gaps = 3/381 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY M G+V Y +M A+ K D E V L E ++ + +S Y I
Sbjct: 182 VYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYS---YTICIR 238
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
LG++ R EA + M+ +G D + LI + A+++F + ++
Sbjct: 239 VLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKP 298
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D + L+ + + G + +++ +MK + A+++ + + A++++
Sbjct: 299 DRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMF 358
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++ +G +P Q +Y S+I+ + + + A ++F M G + + YGK+
Sbjct: 359 DEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKS 418
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G A+ MK+KG P+V N+++ ++ L ++++ E++ V+PD ++Y
Sbjct: 419 GESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITY 478
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T +I ++A +FD VK + + N V D ++ K + +E ++ +K
Sbjct: 479 TMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKE 538
Query: 568 EGTKLDERLYHSAMNALRDAG 588
+ + Y++ + L G
Sbjct: 539 MNLEPTDGTYNTLLAGLGREG 559
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/337 (18%), Positives = 142/337 (42%), Gaps = 1/337 (0%)
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
K +K D P Y L D G +G + ++ + MK G ++ Y ++I + +
Sbjct: 290 KMKKSDQKPDRV-TYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQV 348
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
V A E+F E ++KG++ + L+ +++ L++ + M K +
Sbjct: 349 GRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTH 408
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+N + K A++ YE + S+G +P V +++ + A++VF E++
Sbjct: 409 VLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKA 468
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G + Y+ M+ K + +A+ + M C P+V NSL+D +A +
Sbjct: 469 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDE 528
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+++ +++ + P +Y T+++ R + + E + + ++
Sbjct: 529 AWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 588
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
K + + + +L M ++G D Y++ + L
Sbjct: 589 CLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 625
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 140/357 (39%), Gaps = 10/357 (2%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL----QVF 178
LI++L + KK L + FK + V + L+ V IA L ++
Sbjct: 726 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 785
Query: 179 ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE 238
E AMG ++ + V E+M G Y I+ K E
Sbjct: 786 CGPDEFTYNLLLDAMGKSMRIE---EMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLE 842
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
+ L+ S+ TP + Y L D L K+GR +A F +M E G + +IY
Sbjct: 843 QAIDLYYNLMSQGFSPTPCT---YGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYN 899
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
L+ + LF++ ++G+ D + ++ + G + L +
Sbjct: 900 ILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM 959
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
L+ +++G K + AV ++ ++ +G +P TY S+I + ++A
Sbjct: 960 GLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEA 1019
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
K++ E+ KG+ V Y++++ Y +G A +M GC PN Y L
Sbjct: 1020 GKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 105/252 (41%)
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G V +V + M+ +K + AI G G +A + G + T
Sbjct: 103 HGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYT 162
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y ++ + +A +V+ M G V YS ++ +GK + +WL+ +M+
Sbjct: 163 YNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREME 222
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
A G +PNV+ Y + + G+AK + ++ +ME PD +++T +I A
Sbjct: 223 AHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRIS 282
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ + + + DR ++ F + ++++ MK++G + Y + +
Sbjct: 283 DAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVI 342
Query: 582 NALRDAGLQMQA 593
+AL G +A
Sbjct: 343 DALCQVGRVFEA 354
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 143/326 (43%), Gaps = 6/326 (1%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSED 142
++S + G++ D ++A + E K+L P++ T LL+ + +S + + ++ + E+
Sbjct: 758 YNSLICGLV-DENLIDIAEGLFAEMKEL-GCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE 815
Query: 143 FKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHM 201
T + +++ V++R+ + A L ++ G + + G K
Sbjct: 816 MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 875
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
++ +M G + Y ++ + G++EKV LF + + ++ S
Sbjct: 876 IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS--- 932
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y I+ D+L K+G+ + L +FR + E G+ D Y LI ++ A LF E +
Sbjct: 933 YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 992
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+KG++ + L+L + G + + E + K + A++ G+S
Sbjct: 993 KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTD 1052
Query: 382 AAVKVYEQLISQGCIPGQVTYASIIN 407
+A Y ++I GC+P TY + N
Sbjct: 1053 SAYAAYGRMIVGGCLPNSSTYMQLPN 1078
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 139/305 (45%), Gaps = 2/305 (0%)
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ L K G+ EA++ FR+M+EKG D Y LI ++++ L E + +G
Sbjct: 99 NGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFS 158
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
L+ + G V+ +D+++ M++ + + A++ G A+ V
Sbjct: 159 PTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILV 218
Query: 387 YEQLISQG--CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+++ +G C P VTY +I+ C+ L+ + EM G Y++++
Sbjct: 219 LKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGL 278
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ G +A L+ +M A GCE +V IYNSL+D + L ++ M + V PD
Sbjct: 279 CQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDV 338
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+YT++I A D + E R G V + ++ F++ + + ++L+ +
Sbjct: 339 FTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNE 398
Query: 565 MKSEG 569
MKS G
Sbjct: 399 MKSNG 403
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 8/278 (2%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y IL + L K + + +M+ +G Y +LI F + V A ++ E E
Sbjct: 129 YNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEME 188
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-----VNGFSK 376
+G+ + L+ + G VE+ + V++ MK L+ ++C + ++G +
Sbjct: 189 HRGITPNTVTYTALIQGLCDCGEVERAILVLKEMK---LRGNECCPNVVTYTQLIHGLCQ 245
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ + ++ +++I GC P TY ++I+ C+ + +A + EM G + VV
Sbjct: 246 KGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVI 305
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y+S++ K G + A + M KG P+V+ Y SL+ A L + L +EM
Sbjct: 306 YNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMR 365
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+ + P+ V+YTT+I+ + +A D ++ NE + NG
Sbjct: 366 AKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNG 403
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 156/346 (45%), Gaps = 9/346 (2%)
Query: 163 VRARKFKIANTLLQVF----ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
VR R+ + + L+++ + + +++++ + G K + ++ +M+ G
Sbjct: 64 VRTRRRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSA 123
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
DS Y ++ K E +L E ++R T + Y L +GR A
Sbjct: 124 PDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVT---YTTLIHGFCTAGRVDAA 180
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLV 336
+ +M+ +GI + Y +LI EV+ A + KE + +G P V +L+
Sbjct: 181 MDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLI 240
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
++GL E ++ ++ M + ++ A+++G ++ + A + ++++ GC
Sbjct: 241 HGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCE 300
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
V Y S+I+ C++ A ++ I M +KG V Y+S++ G + +A+ L
Sbjct: 301 LDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGL 360
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ +M+AKG PN Y +L++ +A +L EM+ + P
Sbjct: 361 MQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMP 406
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 113/221 (51%), Gaps = 4/221 (1%)
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+NG K+ A++++ ++ +G P TY +IN C+ A + EMQ +GF
Sbjct: 98 INGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGF 157
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
VV Y++++ + GR+ AM ++ +M+ +G PN Y +L+ + +
Sbjct: 158 SPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAIL 217
Query: 491 LWKEMERR--KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI-AGIMVG 547
+ KEM+ R + P+ V+YT +I + F+M ++F +E ++G + A ++ G
Sbjct: 218 VLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHG 277
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ K S +E V LL +M + G +LD +Y+S ++ L G
Sbjct: 278 LCQKGSFLEAAV-LLNEMVAIGCELDVVIYNSLIDGLCKMG 317
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 6/233 (2%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++NG K V + +++ ++G P VTY ++I+ +C A + EM+ +G
Sbjct: 132 LINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRG 191
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG--CEPNVWIYNSLMDMHGRA-KNLR 486
V Y++++ G + A+ ++ +MK +G C PNV Y L+ HG K L
Sbjct: 192 ITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLI--HGLCQKGLF 249
Query: 487 QVE-KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
++ + EM P+ +YT +I + F NE G +D I +
Sbjct: 250 EMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSL 309
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+ K+ +++ ++ M +G D Y S + L DAGL +A L Q
Sbjct: 310 IDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQ 362
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%)
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+RRG +++++Y + ++Y+ IN C+ ++A ++F EM++KG
Sbjct: 68 RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+ ++ K ++ + L+ +M+A+G P V Y +L+ A + + EM
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
E R +TP+ V+YT +I E + + E ++ G
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRG 226
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 133/341 (39%), Gaps = 43/341 (12%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+E+ R+ + + PD+ ++ ++G+ KD Q E+ +E + F P T LI
Sbjct: 111 MEIFREMEEKGSAPDSFTYNILINGLCKDAQL-EMGVSLMDEMQAR-GFSPTVVTYTTLI 168
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
+ + D+ + + ++ + + P+ T + L+ Q GE+
Sbjct: 169 HGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALI----------------QGLCDCGEV 212
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG--IVLDSGCYCQIMEAYYKIGDSEKVAA 242
ILV ++MK G + Y Q++ + G E
Sbjct: 213 E------------------RAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFE---- 250
Query: 243 LFLECKSRKLDSTPFSTH-MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
+ +E + S F + Y L L + G EA +M G D IY SLI
Sbjct: 251 MGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLI 310
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ E+ A E+ EKG+ D L+ + GL+++ L +++ M+ +
Sbjct: 311 DGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIV 370
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
+ ++NGF++ A+++ ++ S G +P Y
Sbjct: 371 PNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIY 411
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 14/241 (5%)
Query: 72 HHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAK-KLPEFRPEKSTLKLLIRYLVQS 130
H+ P+ + + + G L D E A E K + E P T LI L Q
Sbjct: 188 EHRGITPNTVTYTALIQG-LCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQK 246
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAF 189
++ + ++ I P+ T + L+ + F A LL + G E+ ++ +
Sbjct: 247 GLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIY 306
Query: 190 NSAMGGYNKL-HMYYS---TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
NS + G K+ + ++ IL+ EK G+ D Y +++ G ++ L
Sbjct: 307 NSLIDGLCKMGELDFAREMQILMVEK----GVAPDVFTYTSLIQGLCDAGLLDEALGLMQ 362
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E +++ + P S Y L + ++ R AL+ +MK G++ IY L S
Sbjct: 363 EMRAKGI--VPNSV-TYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSLY 419
Query: 306 S 306
S
Sbjct: 420 S 420
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 115/521 (22%), Positives = 216/521 (41%), Gaps = 77/521 (14%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE--FRPEKSTLKLLIRYLVQSKKWDS 135
PD+ +++ L G ++ T E +N K+ + P T L++ L + +D
Sbjct: 400 PDSYSYNTLLDGYCREGHTSEA----FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDD 455
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMG 194
+ + V PD S L+ + F+ A+TL + + G + + FN+ +
Sbjct: 456 ALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 515
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK---IGDSEKV----------- 240
G K+ +++KMK G D Y +++ Y K +G + KV
Sbjct: 516 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISP 575
Query: 241 ---------AALFLECKSRKL-DSTPFSTHM-----------YKILCDSLGKSGRAFEAL 279
+ LF KSR+L + T T M Y L D K G +A
Sbjct: 576 SIEMYNSLISGLF---KSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 632
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
+ +M E G+ + I ++++ + + A L ++ + G D E LK + Y
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRY 692
Query: 340 IEEGLVEKTLD-----------VVESMKNAKL----KISDC-----------------IS 367
+ +LD +V ++ A L K+ D
Sbjct: 693 AAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTY 752
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
C +++G+S A ++ ++++ +G +P VTY ++IN C+ +A+++F ++ Q
Sbjct: 753 CTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQ 812
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
KG VV Y++++ Y K G + A L KM +G P+V Y++L++ + ++ +
Sbjct: 813 KGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIER 872
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
KL +M + V + Y T++ Y R+ E K Y+
Sbjct: 873 SMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYD 913
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 112/558 (20%), Positives = 233/558 (41%), Gaps = 52/558 (9%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAK--KLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLS 140
FD L ++ T+ Y + N K ++P R S L+ LV++ + + +
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNS----LLNNLVKNGETHTAHYVY 214
Query: 141 EDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKL 199
+ ++PD S +V + + K A ++ G E ++ ++S + GY L
Sbjct: 215 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 274
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK---IGDSEKVAALFLECKSRKLDSTP 256
+ V + M G+ + Y +++ Y K + ++EKV E + D
Sbjct: 275 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE-- 332
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y +L D ++G+ +A++ +M G+ + I SLI + E+ AE +
Sbjct: 333 ---RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 389
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ + D L+ Y EG + ++ + M ++ + ++ G +
Sbjct: 390 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 449
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A++++ ++ +G P +V Y+++++ ++ + A ++ ++ +GF K +
Sbjct: 450 VGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT 509
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
+++M++ K G++ +A + KMK GC P+ Y +L+D + +A N+ Q K+ ME
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 569
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG------------------GVID 538
R ++P Y ++IS ++R E + G G++D
Sbjct: 570 REPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 629
Query: 539 RA-----------------IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+A I MV +L +I+E L+Q M G D + +
Sbjct: 630 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS- 688
Query: 582 NALRDAGLQMQAQWLQQN 599
+R A +Q A L ++
Sbjct: 689 -DIRYAAIQKIADSLDES 705
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/460 (18%), Positives = 180/460 (39%), Gaps = 77/460 (16%)
Query: 146 YNVLPDAHTCSRLVASCVR----ARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHM 201
+N+ PD+++ + L+ R + F + + +LQ I E +L +N+ + G ++
Sbjct: 396 WNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGI---EPTVLTYNTLLKGLCRVGA 452
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
+ + ++ M G+ D Y +++ +K+ + E + L+ + +R + +
Sbjct: 453 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT--- 509
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ + L K G+ EA + F MK+ G D Y +LI + + V A ++
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV----- 564
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ M R+P + ++++ S+ ++G K R
Sbjct: 565 KGAMEREP---------------ISPSIEMYNSL---------------ISGLFKSRRLV 594
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+ ++ +G P VTY ++I+ +C+ + KA + EM + G ++ S+MV
Sbjct: 595 EVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMV 654
Query: 442 AMYGKTGRIRDAMWLVAKMKAKG----------------------------CE----PNV 469
+ + GRI +A L+ KM G C+ PN
Sbjct: 655 SGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNN 714
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
+YN + + + + + + + PD +Y T+I Y+ A D + +E
Sbjct: 715 IVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDE 774
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
G V + ++ K ++ +L + +G
Sbjct: 775 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 814
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 159/355 (44%), Gaps = 27/355 (7%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
FS ++ ++ + G AL F +M + G + SL+ + E A +
Sbjct: 154 FSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYV 213
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+++ G++ D + +V + ++G V++ V+ M+N ++ + +++NG+
Sbjct: 214 YQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVS 273
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV- 435
AA V + + +G VTY +I YC+ +AEKV MQ++ +V
Sbjct: 274 LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEA---ALVP 330
Query: 436 ---AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
AY ++ Y +TG+I DA+ L+ +M G + N++I NSL++ + + + + E +
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390
Query: 493 KEMERRKVTPDKVSYTTVISAYNR----AREFDMCVKFYNEFRMNGGVIDRAIA-GIMVG 547
M + PD SY T++ Y R + F++C K E G+ + ++
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE-----GIEPTVLTYNTLLK 445
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
++ ++ +++ M G DE Y + ++ L + +NFEG
Sbjct: 446 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL----------FKMENFEG 490
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 180/435 (41%), Gaps = 46/435 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + + G K + A+ ++ P P LI L +S++ +
Sbjct: 540 PDGITYRTLIDGYCKASNVGQ-AFKVKGAMEREP-ISPSIEMYNSLISGLFKSRRLVEVT 597
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM-GGY 196
L + I + P+ T L+ + A + +G A + S M G
Sbjct: 598 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 657
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA-ALFLECKSRKLDST 255
+L L+ +KM G D C+ + Y I +K+A +L CK+ L +
Sbjct: 658 YRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAI---QKIADSLDESCKTFLLPNN 714
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+Y I L K+G+ +A +FF + KG + D Y +LI +++ V +E
Sbjct: 715 I----VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNV---DE 767
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
F+ +E MLR GLV + A++NG
Sbjct: 768 AFRLRDE--MLR--------------RGLVPNIVTY----------------NALINGLC 795
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A +++ +L +G P VTY ++I+ YC+I A K+ +M ++G VV
Sbjct: 796 KSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVV 855
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
YS+++ K G I +M L+ +M G + + Y +L+ + R+ ++++ KL+ M
Sbjct: 856 TYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915
Query: 496 ERRKVTPDKVSYTTV 510
R ++ +S+ V
Sbjct: 916 HIRCLSTTAISHKQV 930
>gi|255661174|gb|ACU25756.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 426
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 159/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 152/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G+ D L+ MY+E + L V M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVTPDTASYSTLLTMYVENKKFLEALSVFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ +M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDEMRGLGYFPDSNVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 162/353 (45%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG+ D+ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTASYSTLLTMYVENKKFLEALSVFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ +A + + GRI +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ EM PD V++AY + EFD Y E + G V
Sbjct: 370 KYGNVVEVFDEMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTPD SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 143/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PDTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDIAIHILAGAGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A ++NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDEMRGLGYFPDSNVIALVLNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANDVYMEMQEVG 420
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F E G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDEMRGLGYFPDSNVIALVLNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/532 (20%), Positives = 214/532 (40%), Gaps = 56/532 (10%)
Query: 67 LNRDSHH--------QTAVP-----DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEF 113
L R+ H +T +P D + + + LH + + + E A + + E ++
Sbjct: 148 LGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGR-YERALELFAELRR-QGV 205
Query: 114 RPEKSTLKLLIR-YLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
P T +++ Y + W IV+L ++ + V PD T S ++A+C R A
Sbjct: 206 APTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAV 265
Query: 173 TLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ G ++ +N+ + + K Y + V +M+ G D+ Y ++ Y
Sbjct: 266 AFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTY 325
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ G E+ A S+ L F+ Y + + G G+ EAL F MK+ G +
Sbjct: 326 ARAGFFEEAARCLDTMASKGLLPNAFT---YNTVMTAYGNVGKVDEALALFDQMKKTGFV 382
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ + Y ++ + + E+ E G + ++ + + G+ + V
Sbjct: 383 PNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRV 442
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+E M++ +++S + TY ++I AY R
Sbjct: 443 LEGMRSCGVELS-----------------------------------RDTYNTLIAAYGR 467
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ A K++ EM GF C+ Y++++ + + G A +V+KM+ KG +PN
Sbjct: 468 CGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQS 527
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEM-ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
Y+ L+ + + N+ + + E+ V P V T++ A + R D + E
Sbjct: 528 YSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEV 587
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ G D I M+ +++K + ++ +K G D Y+S M+
Sbjct: 588 KARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMD 639
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 154/382 (40%), Gaps = 15/382 (3%)
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFS------THMYKILCDSLGKSG 273
D+ ++ A + G + V AL LD TP Y + +L ++G
Sbjct: 137 DASALEMVVRALGREGQHDAVCAL--------LDETPLPPGSRLDVRAYTTVLHALSRAG 188
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV-KLAEELFKEAEEKGMLRDPEVC 332
R AL+ F +++ +G+ Y ++ + + L E G+ D
Sbjct: 189 RYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTA 248
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
++ +GLV++ + E +K A++ F K Y A++V ++
Sbjct: 249 STVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQ 308
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
GC P VTY + Y R + +A + M KG Y++++ YG G++ +
Sbjct: 309 NGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDE 368
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A+ L +MK G PNV YN ++ M G+ + ++ EM R TP++V++ T+++
Sbjct: 369 ALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLA 428
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ D + R G + R ++ + + K+ +M S G
Sbjct: 429 VCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTP 488
Query: 573 DERLYHSAMNALRDAGLQMQAQ 594
Y++ +N L G AQ
Sbjct: 489 CITTYNALLNVLSRQGDWSTAQ 510
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/395 (19%), Positives = 163/395 (41%), Gaps = 6/395 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P +T L++ L + ++ ++ + + P+ T + ++A C +
Sbjct: 381 FVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVT 440
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+L+ + G E++ +N+ + Y + + +Y +M SAG Y ++
Sbjct: 441 RVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVL 500
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG-I 290
+ GD ++ + +++ S Y +L K G ++ G +
Sbjct: 501 SRQGDWSTAQSIVSKMRTKGFKPNEQS---YSLLLQCYAKGGNVAGIAAIENEVYGSGAV 557
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
I +L+ + + E F+E + +G D + ++ +Y + G+ K +
Sbjct: 558 FPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATE 617
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL-ISQGCIPGQVTYASIINAY 409
V +S+K + L ++++ ++K W A K+ QL SQ P V+Y ++IN +
Sbjct: 618 VFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGF 677
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ L +A++V EM G C V Y ++V Y +A ++ M G +P
Sbjct: 678 CKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPME 737
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
Y +++ + RAK + E+ + DK
Sbjct: 738 LTYRRVVESYCRAKRFEEARGFLSEVSETDLDFDK 772
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/409 (18%), Positives = 167/409 (40%), Gaps = 41/409 (10%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILV 208
PDA T + L + RA F+ A L + G + +N+ M Y + + +
Sbjct: 313 PDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALAL 372
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYK----------IGDSEKVA---------ALFLECKS 249
+++MK G V + Y ++ K +G+ + + C
Sbjct: 373 FDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGK 432
Query: 250 RKLD-------------STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
R ++ S Y L + G+ G A K + +M G +
Sbjct: 433 RGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITT 492
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y +L+ + + A+ + + KG + + L+ Y + G V + +
Sbjct: 493 YNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVY 552
Query: 357 NAKLKISDCI--SCAIVNGFSKRR--GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ + ++ F RR G A ++++ ++G P V + S+++ Y +
Sbjct: 553 GSGAVFPSWVILRTLVIANFKCRRLDGMETA---FQEVKARGYNPDLVIFNSMLSIYAKN 609
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK-AKGCEPNVWI 471
+YSKA +VF +++ G ++ Y+S++ MY K +A ++ ++K ++ +P+V
Sbjct: 610 GMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVS 669
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
YN++++ + +++ +++ EM + P V+Y T++ Y+ F
Sbjct: 670 YNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMF 718
>gi|255661146|gb|ACU25742.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 426
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 160/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ ++ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 151/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G+ + L+ MY+E + L + M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFNKMRGLGYFPDSNVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 162/353 (45%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG+ ++ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ +A + + GRI +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + EFD Y E + G V
Sbjct: 370 KYGNVVEVFNKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 141/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDIAIHILAGAGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V+ ++ G P A ++NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFNKMRGLGYFPDSNVIALVLNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANDVYMEMQEVG 420
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFNKMRGLGYFPDSNVIALVLNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 161/333 (48%), Gaps = 2/333 (0%)
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA--SITEVKLAEELFKEAEEKGMLRD 328
+SGR +A + M+++ I D + +LI + A +A EL E + G+ D
Sbjct: 6 RSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPD 65
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ + ++ + V E M ++ + A+V+ + A +++
Sbjct: 66 AITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFK 125
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+L+ +G P VTY S++ A+ + + E+V E+ + GF K + Y++M+ MYGK G
Sbjct: 126 ELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMG 185
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
R+ A+ L +M+A GC P+ Y L+D G+ + + K+ +EM + P V+++
Sbjct: 186 RLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFS 245
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I AY ++ D + ++ +G DR +M+ VF++ + +L+ L + M +
Sbjct: 246 ALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKD 305
Query: 569 GTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
G K D+ LY + AL + + + Q+ E
Sbjct: 306 GYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 338
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 144/329 (43%), Gaps = 1/329 (0%)
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
MG Y + + + + M+ I D + ++ A K G AL L + R+
Sbjct: 1 MGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQA 60
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
P + Y L + + +A+ F +M D Y +++ + +
Sbjct: 61 GLRPDAI-TYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQE 119
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
AE +FKE EKG D L+ + +EG VE+ V E + A + +++
Sbjct: 120 AELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIH 179
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
+ K A+ +Y+++ + GC P VTY ++++ ++ S+A KV EM G
Sbjct: 180 MYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKP 239
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+V +S+++ Y K+GR DA +M G +P+ Y ++D+ R+ R++ L+
Sbjct: 240 TLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLY 299
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFD 521
+ M + PD Y +++A + E D
Sbjct: 300 RAMIKDGYKPDDGLYQVLLAALAKGNEHD 328
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 108/259 (41%), Gaps = 6/259 (2%)
Query: 72 HHQTAVPDAKKFDSFLHGMLKDP-QTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQS 130
Q PD F++ ++ K +A + +E ++ RP+ T LI Q
Sbjct: 21 RDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQ-AGLRPDAITYNTLISACSQG 79
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAF 189
D V++ E+ PD T + +V+ R K + A + + + G + + +
Sbjct: 80 SNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTY 139
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
NS + + K V E++ AG D Y ++ Y K+G + L+ E
Sbjct: 140 NSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEM-- 197
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
R + TP + Y +L DSLGK R EA K +M + G+ +++LIC++A
Sbjct: 198 RAIGCTPDAV-TYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGR 256
Query: 310 VKLAEELFKEAEEKGMLRD 328
AE F E G+ D
Sbjct: 257 QDDAERTFDRMVESGVKPD 275
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/477 (20%), Positives = 209/477 (43%), Gaps = 7/477 (1%)
Query: 111 PEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKI 170
P RP + +L+R L + D V L + V D T L+ A +
Sbjct: 109 PACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDK 168
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
A L+ G E ++ ++S + GY K + V+ +M GI D Y +++
Sbjct: 169 AVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLID 228
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
+ K+G ++K + R L+ + Y +L + + K G EA+ + M EKG
Sbjct: 229 SLCKVGKAKKAHGVMDMMVRRGLEPNVVT---YNVLINCMCKEGSVKEAIGVLKKMSEKG 285
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEK 347
+ D Y +LI + + E+ A L +E + P V ++ + G + +
Sbjct: 286 VAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQ 345
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
V M+ ++ ++ G + A+++ +++ S G P TY+ +I
Sbjct: 346 AFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIK 405
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+C++ +AE + M+ +G + + Y ++ + G + A L +M
Sbjct: 406 GFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPL 464
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
+V Y++++ +A +L+ ++L K + +TPD V+Y+ VI+ + ++ + +
Sbjct: 465 DVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVL 524
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ +G + D A+ ++ +S +I ++++L+++M ++ LD ++ + +L
Sbjct: 525 KQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSL 581
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 155/366 (42%), Gaps = 10/366 (2%)
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF---STHMYKILCDSLGKSGR 274
V D+ Y ++ A + G ++ AL ++ L+ P + Y +L +L
Sbjct: 74 VRDAVSYNTVLTALCRRGHHDRAGALL---RAMSLEPHPACRPNAVSYTVLMRALCADRL 130
Query: 275 AFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
A +A+ R M+ G+ D Y +LI EV A EL E E G+ + V
Sbjct: 131 ADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSS 190
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
L+ Y + G E V M ++ + +++ K A V + ++ +G
Sbjct: 191 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 250
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
P VTY +IN C+ +A V +M +KG VV Y++++ + +AM
Sbjct: 251 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310
Query: 455 WLVAKM-KAKG-CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
WL+ +M + K +PNV +NS++ +RQ ++ ME + V+Y +I
Sbjct: 311 WLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIG 370
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
R + ++ +E G D I++ F K+ Q++ LL M+ G +
Sbjct: 371 GLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG--I 428
Query: 573 DERLYH 578
+ L+H
Sbjct: 429 EPELFH 434
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 161/382 (42%), Gaps = 12/382 (3%)
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-CKSRKLDSTPFSTHMYKILCDSLG 270
M+SAG+ D Y ++ + +K L E C+S + +Y L
Sbjct: 141 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCES----GIEPNVVVYSSLLQGYC 196
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
KSGR + K F +M EKGI D +Y LI S + + K A + +G+ +P
Sbjct: 197 KSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL--EPN 254
Query: 331 VCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
V VL+ +EG V++ + V++ M + ++ G S A+ + E
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE 314
Query: 389 QLISQGCI--PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+++ I P VT+ S+I C I +A +V M++ G +V Y+ ++ +
Sbjct: 315 EMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR 374
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
++R AM L+ +M + G EP+ + Y+ L+ + + + E L M R + P+
Sbjct: 375 VHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFH 434
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y ++ A + +NE N +D M+ K ++ +LL+ +
Sbjct: 435 YIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIV 493
Query: 567 SEGTKLDERLYHSAMNALRDAG 588
EG D Y +N +G
Sbjct: 494 DEGLTPDAVTYSIVINMFAKSG 515
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 2/223 (0%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
AV + + S G VTY ++I C A KA ++ EM + G + VV YSS++
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
Y K+GR D + +M KG EP+V +Y L+D + ++ + M RR + P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ V+Y +I+ + + + G D ++ S + +++E + LL
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
Query: 563 QDM--KSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
++M K + ++S + L D G QA ++ E T
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEET 356
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/409 (18%), Positives = 178/409 (43%), Gaps = 3/409 (0%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
L++ +S +W+ + + + + PD + L+ S + K K A+ ++ + + G
Sbjct: 191 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 250
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
E ++ +N + K I V +KM G+ D Y +++ + + ++ A
Sbjct: 251 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDE-A 309
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LE R + + + + L GR +A + M+E G + + Y LI
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLI 369
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ +V+ A EL E G+ D L+ + + V++ D++ +M++ ++
Sbjct: 370 GGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIE 429
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
++ ++ A ++ ++ + + V Y+++I+ C+ A+++
Sbjct: 430 PELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLD-VVAYSTMIHGACKAGDLKTAKEL 488
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
+ +G V YS ++ M+ K+G + A ++ +M A G P+V +++SL+ +
Sbjct: 489 LKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST 548
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
+ +V +L +EM + + D +T+ ++ + E ++ +F
Sbjct: 549 KGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDF 597
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 174/414 (42%), Gaps = 38/414 (9%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSA-GIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+N + G K + V ++M+ + D Y ++ + K G+ ++ + E
Sbjct: 44 YNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREM 103
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+R D Y + D L + G+ A + R+MK KG+ D +++LI + +
Sbjct: 104 VTR--DGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNA 161
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+V A +L+KE + ++ K
Sbjct: 162 RKVDEALKLYKEI----------------------------------LTSSSWKPDVVTY 187
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
A+++GF K A+K+ + + C+P VTY+S+++ C+ +A +F M
Sbjct: 188 TALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS 247
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
KG VV Y++++ ++ A L+ +M A C P+ YN+L+D + R + +
Sbjct: 248 KGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEE 307
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV-IDRAIAGIMV 546
++L+KEM + PD+++YT ++ + A + + G+ D I+V
Sbjct: 308 AKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVV 367
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+S+ + E + +Q+M + + Y S ++ L AG A + +N
Sbjct: 368 AGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNM 421
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 115/531 (21%), Positives = 216/531 (40%), Gaps = 17/531 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + ++ ++G+ K T + AY+ E + P+ T +I + + D
Sbjct: 39 PNERTYNVVVNGLCKARLTSK-AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 97
Query: 138 S-LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
L E + PD T + +V R K A +++ G E F++ + G
Sbjct: 98 EILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 157
Query: 196 YNKLHMYYSTILVY-EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
+ + +Y E + S+ D Y +++ + K G+ EK + + RK
Sbjct: 158 WCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRK--C 215
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
P + Y L L K+G +AL FR M KG + + Y +LI + +V A
Sbjct: 216 VP-NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAAR 274
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
L E D L+ Y G +E+ + + M +V GF
Sbjct: 275 LLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGF 334
Query: 375 SKRRGYWAAVKVYEQL-ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
A + E + + G P VTY+ ++ Y R + +A + EM +
Sbjct: 335 CNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPN 394
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V YSS++ K GR+ AM ++ M K EP+V +NS++ R ++ + KL
Sbjct: 395 AVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLV 454
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG--------VIDRAIAGIM 545
M + P V+YTT++ ++R ++ + + R V ++A + ++
Sbjct: 455 AMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALI 514
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
G K +I++ + ++++++S + E + ++ L AG +A L
Sbjct: 515 RG-LCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKL 564
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 132/296 (44%), Gaps = 38/296 (12%)
Query: 344 LVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQ-GCIPGQVT 401
L K +V++ M++ K D ++ ++NGF K+ A ++ +++++ G P VT
Sbjct: 56 LTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVT 115
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDK------------C---------------- 433
Y S+++ CR +A ++ EM+ KG + C
Sbjct: 116 YTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEIL 175
Query: 434 --------VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
VV Y++++ + K+G + AM ++ M+ + C PNV Y+SL+ +A +L
Sbjct: 176 TSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 235
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
Q L++ M + P+ V+YTT+I A + D +E D +
Sbjct: 236 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNAL 295
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ + +L +IEE +L ++M ++ D Y + +A +A++L +N +
Sbjct: 296 LDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMK 351
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 37/236 (15%)
Query: 395 CIPGQVTYASII----------------------------------NAYCRIALYSKAEK 420
C P VT+ II N C+ L SKA +
Sbjct: 3 CQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYE 62
Query: 421 VFIEMQQ-KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK-GCEPNVWIYNSLMDM 478
V EM+ K +V YS+++ + K G + A ++ +M + G P+V Y S++D
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG-VI 537
R + + ++ +EM+ + V PDK +++ +I+ + AR+ D +K Y E +
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
D ++ F K +E+ +K+L M+ + Y S ++ L AG QA
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 238
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 141/365 (38%), Gaps = 18/365 (4%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VP+ + S LHG+ K + A D + P T LI L + K D+
Sbjct: 216 VPNVVTYSSLLHGLCKAGDLDQ-ALDLFRRMTS-KGCVPNVVTYTTLIHGLCAAHKVDAA 273
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
L ++ PD + + L+ R + + A L + T + + + + G
Sbjct: 274 RLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRG 333
Query: 196 YNKLHMYYSTILVYEKMKSA-GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
+ + E MK+A GI D Y ++ Y + + A E +R +
Sbjct: 334 FCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 393
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+ Y L D L K+GR A++ ++M K + + S+I + + ++ A
Sbjct: 394 NAVT---YSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAW 450
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLK-------ISDC 365
+L G+ +P + L+ + G +E ++ E M+ K + +
Sbjct: 451 KLLVAMAAHGL--EPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQ 508
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
A++ G K R A+ V E+L S+ C P + +I++ R +A K+ +
Sbjct: 509 AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 568
Query: 426 QQKGF 430
+ G
Sbjct: 569 SKVGL 573
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 182/412 (44%), Gaps = 3/412 (0%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+++ F + K++ + I ++ KM++ GI D + ++ + + S AL
Sbjct: 614 SIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRC--SRFSLALA 671
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
L K KL P + +L + + R EA+ M E G+ + IY ++I
Sbjct: 672 LLGKMMKLGFQPSIVTLGSLL-NGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGL 730
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
++ A E+F E+KG++ D L+ G ++ M K+ +
Sbjct: 731 CKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNV 790
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
A+++ F K A +Y+++I + P +TY S+IN +C A+ +F
Sbjct: 791 IFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDL 850
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M KG VV Y++++ + K+ R+ D M L +M +G + + YN+L+ + +A
Sbjct: 851 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGK 910
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
L +K++ M V PD V+Y ++ + + + + + N +D I
Sbjct: 911 LNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNI 970
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ + +++E L + + +G KLD Y + ++ L GL+ +A L
Sbjct: 971 IIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKL 1022
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 4/413 (0%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+++ F + L Y + I ++M+ GI D + ++ + + S AL
Sbjct: 64 SVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRC--SRLSLALS 121
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ K KL P S + L R +A M + G + +Y +LI
Sbjct: 122 ILGKMMKLGYDP-SIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCL 180
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI-EEGLVEKTLDVVESMKNAKLKIS 363
+V +A EL E E+KG L V +L + G + ++ M ++
Sbjct: 181 CKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPD 240
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
A+++ F K+ A ++Y+Q++ P VTY S+IN C A+K F
Sbjct: 241 VFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFD 300
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M KG VV Y++++ + K+ R+ D M L +M +G + + YN+L+ + +
Sbjct: 301 LMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVG 360
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
LR + ++ M VTPD +++ ++ E + +N+ R +
Sbjct: 361 KLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYN 420
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
IM+ K ++EE +L + EG K D R Y + L G + +A L
Sbjct: 421 IMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 473
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/494 (19%), Positives = 207/494 (41%), Gaps = 50/494 (10%)
Query: 114 RPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
RP S + ++ + + K+D ++ L + + D ++ + L+ R +F +A
Sbjct: 610 RPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLA 669
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
LL + G + +++ S + G+ + + + + + + M G+ + Y ++
Sbjct: 670 LALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVING 729
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
CK+R L++ AL+ F M++KGI
Sbjct: 730 L---------------CKNRDLNN-----------------------ALEIFYGMEKKGI 751
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEEGLVEKT 348
+ D Y +LI + A L ++ ++ + DP V L+ +++EG + +
Sbjct: 752 VADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKI--DPNVIFFTALIDTFVKEGNLLEA 809
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
++ + M + + +++NGF + A +++ ++S+GC P VTY ++I
Sbjct: 810 KNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITG 869
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+C+ K+F EM +G Y++++ Y + G++ A + +M G P+
Sbjct: 870 FCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPD 929
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ YN L+D + + + +++++ ++ D ++Y +I R + +
Sbjct: 930 IVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFR 989
Query: 529 EFRMNGGVIDRAIAGI-MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
G +D AIA I M+ + E KL MK +G ER+Y LRD
Sbjct: 990 SLTRKGVKLD-AIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDE---TLRDH 1045
Query: 588 GLQMQAQWLQQNFE 601
+ A+ ++ E
Sbjct: 1046 YTSLSAELIKAVHE 1059
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 169/416 (40%), Gaps = 33/416 (7%)
Query: 75 TAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEF-RPEKSTLKLLIRYLVQSKKW 133
TA+ + +++++ ++ + + +++D Y+ + F R + +L L I + +
Sbjct: 73 TAIANLRRYETVIY-FSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGY 131
Query: 134 D-SIV---SLSEDFKIYNVLPDAHTCSRLVASCVRAR---KFKIANTLLQVFITDGEIA- 185
D SIV SL F + N + DA + LVAS V++ + NTL+ +G++
Sbjct: 132 DPSIVTFGSLLHGFCLRNRIHDAFS---LVASMVKSGYEPNVVVYNTLIDCLCKNGDVNI 188
Query: 186 -----------------LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
L+ +N+ + G + + M I D + ++
Sbjct: 189 ALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALI 248
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
+A+ K G+ ++ L+ K S +T Y L + L GR + A K F M K
Sbjct: 249 DAFVKQGNLDEAQELY---KQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASK 305
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G + Y +LI F V+ +LF+ +G++ D L+ Y + G +
Sbjct: 306 GCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVA 365
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
D+ M + + C +++G +A+ + + S G V Y +I+
Sbjct: 366 KDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHG 425
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
C+ +A ++F + +G Y+ M+ K G R+A L +MK G
Sbjct: 426 LCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDG 481
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 93/532 (17%), Positives = 188/532 (35%), Gaps = 47/532 (8%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
RD + PD F + + +K E A + Y + + P T LI L
Sbjct: 230 RDMTKRRINPDVFTFTALIDAFVKQGNLDE-AQELYKQMLQ-SSIGPNTVTYNSLINGLC 287
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LL 187
+ + P+ T + L+ ++R+ + L Q +G +
Sbjct: 288 MHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTF 347
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+N+ + GY ++ ++ M S G+ D +C ++ G+ F +
Sbjct: 348 TYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDM 407
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+S Y I+ L K+ + EA + F + +G+ D Y +I
Sbjct: 408 RS---GEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKN 464
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+ A+ELF+ +E G ++ E+G + E N ++ + I
Sbjct: 465 GPRREADELFRRMKEDG-----------IICQAEDG------HLGEHGTNNQVSLGTIII 507
Query: 368 CAIVNGFSKRRG---------YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY--- 415
C +RR Y++ ++ L+ G IP + +S + + R L
Sbjct: 508 CP-----KRRRSIMESGDLYYYYSDTTLWSSLV--GLIP--IASSSSVKGFVRRHLLLLE 558
Query: 416 ---SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+ + F Y + + DA L +M P++ +
Sbjct: 559 RGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDF 618
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
++ + V L+ +ME ++ D S+T +I + R F + + +
Sbjct: 619 TRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMK 678
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G G ++ F + ++ +E V L+ M G + + +Y++ +N L
Sbjct: 679 LGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGL 730
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/463 (19%), Positives = 200/463 (43%), Gaps = 15/463 (3%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD F++ +HG +K Q + + +++ KKL RP+ TL L+ +++S + +
Sbjct: 647 PDVLTFNTIIHGFIKQNQIKNAIW-LFHQMKKL--LRPDHVTLCTLLPGVIKSGQIEDAF 703
Query: 138 SLSEDFKIYNVLPD------AHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNS 191
++EDF Y V + ++ + L+ I + L+
Sbjct: 704 RITEDF-FYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIK 762
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ + K + + + + K G+ Y +++ + ++ + E LF E KS
Sbjct: 763 VLCKHKKTSVARNVFVKFTK--ELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAG 820
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
F+ Y L D+ GKSG+ E + +M +G + Y +I + +
Sbjct: 821 CAPDTFT---YNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLD 877
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A +L+ P L+ ++ G ++ ++ + M + + + I +V
Sbjct: 878 KAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILV 937
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
NG+ K A + +++++ +G P +Y +++ C A F +++Q G D
Sbjct: 938 NGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLD 997
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+VAY+ M+ G++ R +A+ L +M+ +G P+++ YNSL+ G + + K+
Sbjct: 998 PDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKI 1057
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
++E++ + P+ +Y +I Y + ++ Y + + G
Sbjct: 1058 YEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGG 1100
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/529 (19%), Positives = 224/529 (42%), Gaps = 13/529 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +S + + K + +E A+ + +++ P T +L+ L + + V
Sbjct: 542 PDVIVINSLIDTLYKAGRVEE-AWQMFCRMEEM-NLAPTVVTYNILLAGLGKEGQIQKAV 599
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-DGEIALLAFNSAMGGY 196
L E + P+ T + L+ + + +A + T + +L FN+ + G+
Sbjct: 600 QLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGF 659
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG---DSEKVAALFLECKSRKLD 253
K + + I ++ +MK + D C ++ K G D+ ++ F +D
Sbjct: 660 IKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNID 718
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+ + M IL ++ + +A+ F + + I +D S+ +I + +A
Sbjct: 719 RSFWEDVMGGILTEAGTE-----KAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVA 773
Query: 314 EELF-KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
+F K +E G+ +V L+ ++E VE ++ E MK+A ++++
Sbjct: 774 RNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLID 833
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
K +Y++++++GC P +TY +I+ + KA ++ + F
Sbjct: 834 AHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSP 893
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+ ++ K+GR+ DA + M GC PN IYN L++ +G+ ++ + +
Sbjct: 894 TPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFF 953
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
K M + + PD SYT ++ A D + ++ + + G D +M+ +
Sbjct: 954 KRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRS 1013
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ EE + L +M++ G D Y+S + L G+ +A + + +
Sbjct: 1014 QRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQ 1062
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 114/556 (20%), Positives = 228/556 (41%), Gaps = 52/556 (9%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
V +A ++ +H +L+ +E A + Y +P T L+ + + ++
Sbjct: 191 VLNAYSYNGLIHFLLQSGFCKE-ALEVYRRMVS-EGLKPSLKTFSALMVASGKRRNIKTV 248
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG----EIALLAFNSA 192
+ L E+ + + P+ +T + + R K A +++ DG + A
Sbjct: 249 MGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDA 308
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ KL + ++ KMKS+ D Y +++ + G +KV ++ E ++
Sbjct: 309 LCTARKLD---DAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEA--- 362
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D + IL ++L K+GR EA M+++G+L + Y +LI +
Sbjct: 363 DGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDD 422
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC-AIV 371
A +LF E G+ + L+ + + G K L+ E MK A+ + ++C A +
Sbjct: 423 ALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMK-ARGIAPNIVACNASL 481
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA-------LYSKAEKV--- 421
++ A ++ +L S G P VTY ++ Y ++ L S+ KV
Sbjct: 482 YSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCE 541
Query: 422 -------------------------FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
F M++ VV Y+ ++A GK G+I+ A+ L
Sbjct: 542 PDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQL 601
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
M GC PN +N+L+D + + K++ +M PD +++ T+I + +
Sbjct: 602 FESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIK 661
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE-GTKLDER 575
+ + +++ + + ++ GV K QIE+ ++ +D + G+ +D
Sbjct: 662 QNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVI-KSGQIEDAFRITEDFFYQVGSNIDRS 720
Query: 576 LYHSAMNA-LRDAGLQ 590
+ M L +AG +
Sbjct: 721 FWEDVMGGILTEAGTE 736
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 179/392 (45%), Gaps = 16/392 (4%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
EKM+ AG VL++ Y ++ + G ++ ++ S L S + L +
Sbjct: 183 EKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKP---SLKTFSALMVAS 239
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE--ELFKEAEEKGMLR 327
GK + +M+ G+ P+IY IC + K+ E + K ++ G
Sbjct: 240 GKRRNIKTVMGLLEEMESMGL--RPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGC-- 295
Query: 328 DPEVCLKLVLMYIEEGLVEKTLD----VVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
P+V VL I+ + LD + MK++ K +++ FS
Sbjct: 296 GPDVVTYTVL--IDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKV 353
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
K++ ++ + G P VT+ ++NA C+ ++A + M+++G + Y+++++
Sbjct: 354 EKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISG 413
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+ R+ DA+ L + M++ G EP + Y L+D HG++ + + + +++M+ R + P+
Sbjct: 414 LLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPN 473
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
V+ + + +NE + +G D +M+ +SK+ Q++E +KLL
Sbjct: 474 IVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLS 533
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
+M + D + +S ++ L AG +++ W
Sbjct: 534 EMSKVQCEPDVIVINSLIDTLYKAG-RVEEAW 564
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 148/340 (43%), Gaps = 10/340 (2%)
Query: 237 SEKVAALFLECKSRKLDSTPFST----HMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
S+ + ALF +L + +T HM +IL + R E + F D+ ++ I+
Sbjct: 102 SDPIHALFYFKSVGELPNVVHTTETCNHMLEIL-----RVHRRVEDMAFVFDLMQRQIIR 156
Query: 293 -DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y + S ++ A ++ E G + + L+ ++ G ++ L+V
Sbjct: 157 RNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEV 216
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
M + LK S A++ KRR + + E++ S G P TY I R
Sbjct: 217 YRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGR 276
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+A ++ M G VV Y+ ++ ++ DAM L KMK+ +P+
Sbjct: 277 DGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVT 336
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y +L+D +L +VEK+W EME PD V++T +++A +A + + R
Sbjct: 337 YVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMR 396
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
G + + ++ + +++++ + L +M+S G +
Sbjct: 397 KQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVE 436
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 11/269 (4%)
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKIS-----DCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
++I GL + +E M+ A ++ I + +GF K A++VY +++S
Sbjct: 169 LFIRGGL-RQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKE-----ALEVYRRMVS 222
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
+G P T+++++ A + + EM+ G + Y+ + + G+ G+I +
Sbjct: 223 EGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDE 282
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A ++ +M GC P+V Y L+D A+ L L+ +M+ PDKV+Y T++
Sbjct: 283 AYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLD 342
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
++ D K + E +G D I+V K +I E LL M+ +G
Sbjct: 343 KFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLP 402
Query: 573 DERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ Y++ ++ L A A L N E
Sbjct: 403 NLHTYNTLISGLLRANRLDDALDLFSNME 431
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 137/331 (41%), Gaps = 6/331 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P K ++ + G L + E+A++ + E K P+ T LI +S K + +
Sbjct: 788 PTLKVYNLLIDGFL-EVHNVEVAWNLFEEMKS-AGCAPDTFTYNSLIDAHGKSGKINELF 845
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-DGEIALLAFNSAMGGY 196
L ++ P+ T + ++++ V++ + A L ++ D F + G
Sbjct: 846 DLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGL 905
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K +++ M G +S Y ++ Y K+G + F K +
Sbjct: 906 LKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFF---KRMVKEGIR 962
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y IL D L +GR +AL +F +K+ G+ D Y +I + A L
Sbjct: 963 PDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSL 1022
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F E + +G++ D L+L G++E+ + E ++ LK + A++ G++
Sbjct: 1023 FHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTL 1082
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
A +Y++++ GC P T+A + N
Sbjct: 1083 SGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/480 (21%), Positives = 205/480 (42%), Gaps = 41/480 (8%)
Query: 91 LKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLP 150
L+D + + A D +++ K F P L+ +V+ KK+D ++SL + ++ +
Sbjct: 61 LRDIKLND-AIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVY 209
D +T + ++ + +A ++L + G E + S + G+ + + + +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+KM G D Y I+++ K F E + + + + Y L + L
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT---YTALVNGL 235
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
S R +A + DM +K I + Y++L+ +F +V A+ELF+E
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEE---------- 285
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
+V M I+ +V + +++NG A ++++
Sbjct: 286 -----MVRMSIDPDIVTYS--------------------SLINGLCLHDRIDEANQMFDL 320
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
++S+GC+ V+Y ++IN +C+ K+F EM Q+G V Y++++ + + G
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ A ++M G P++W YN L+ L + ++++M++R++ D V+YTT
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
VI + + + + + G D M+ + E+ L MK EG
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 175/418 (41%), Gaps = 53/418 (12%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD-------SGCYCQIMEAYYKIGDS 237
+++ FN + KL Y I + +KM+ GI D C+C +
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSL----- 138
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
AL + K KL P + L + + R +A+ M E G D Y
Sbjct: 139 ----ALSILGKMLKLGYEPDRVTIGS-LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY 193
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++I S V A + FKE E KG I +V T
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKG---------------IRPNVVTYT--------- 229
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
A+VNG + A ++ +I + P +TY+++++A+ + +
Sbjct: 230 -----------ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A+++F EM + D +V YSS++ RI +A + M +KGC +V YN+L++
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+AK + KL++EM +R + + V+Y T+I + +A + D +F+++ G
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
D I++G ++E+ + + +DM+ LD Y + + + G +++ W
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG-KVEEAW 455
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 119/236 (50%), Gaps = 2/236 (0%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++VNGF +R AV + ++++ G P V Y +II++ C+ + A F E+++K
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G VV Y+++V + R DA L++ M K PNV Y++L+D + + +
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
++L++EM R + PD V+Y+++I+ D + ++ G + D ++
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ--WLQQNFEG 602
F K ++E+ +KL ++M G + Y++ + AG +AQ + Q +F G
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 163/398 (40%), Gaps = 59/398 (14%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ + + K + + A+D++ E ++ RP T L+ L S +W
Sbjct: 188 PDIVAYNAIIDSLCKTKRVND-AFDFFKEIER-KGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
L D + P+ T S L+ + V+ K A L + E+ ++ + + Y+
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE------EMVRMSIDPDIVTYS 299
Query: 198 KLHMYYSTILVYEKMKSAGIVLD----SGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
L + + +++++ A + D GC ++
Sbjct: 300 SL---INGLCLHDRIDEANQMFDLMVSKGCLADVVS------------------------ 332
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
Y L + K+ R + +K FR+M ++G++ + Y +LI F +V A
Sbjct: 333 --------YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
+E F + + G+ P++ +L+ + G +EK L + E M+ ++ + ++
Sbjct: 385 QEFFSQMDFFGI--SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
G K A ++ L +G P VTY ++++ C L + E ++ +M+Q+G
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
K S G I + L+ KM + G P++
Sbjct: 503 KNDCTLSD--------GDITLSAELIKKMLSCGYAPSL 532
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 167/374 (44%), Gaps = 34/374 (9%)
Query: 241 AALFLECKSRKLDSTPFSTHMY--KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
AA LE R L S P S + ++ D L KSGR +A + DM G+ + Y
Sbjct: 114 AAGLLE---RALGSCPGSVSPFAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYN 170
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
SL+ + + +E+ + E +G+ E + + ++ + + VE++ N
Sbjct: 171 SLLDCYVRQKDDGRVQEILEIMENEGI----EATVGTYTILVDSLSTARDISKVEALFN- 225
Query: 359 KLKISDCIS-----CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
++K ++ + A++N + + A KV ++ + G P + TY +I +C+I
Sbjct: 226 EMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIG 285
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
AE + +MQ +G + +++M+ Y + G + DA+ + A M+ G E N++ YN
Sbjct: 286 QMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYN 345
Query: 474 SL-------------------MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+L + +H + ++ + +L++EM + TP ++Y+ +I Y
Sbjct: 346 TLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGY 405
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ +F E G V D +V +++ +KL ++MK GT+ +
Sbjct: 406 AKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNV 465
Query: 575 RLYHSAMNALRDAG 588
Y + ++ L G
Sbjct: 466 VAYTALISGLAKEG 479
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 152/325 (46%), Gaps = 22/325 (6%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ E M++ GI G Y ++++ D KV ALF E K+ ++ ++Y + +
Sbjct: 188 ILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKA---NNVVGDVYLYTAVIN 244
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ ++G A K + G+ + Y LI F I +++ AE L + + +G+
Sbjct: 245 AYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGL 304
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS----DCISCAI------------- 370
+ + ++ Y +G+V+ L + +M+ ++++ + ++C +
Sbjct: 305 NQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYT 364
Query: 371 --VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++ K A +++ ++ +G P +TY+ +I+ Y + +AE+ EM++K
Sbjct: 365 TLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKK 424
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
GF V Y+S+V + G++ A+ L +MK +G EPNV Y +L+ +
Sbjct: 425 GFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAA 484
Query: 489 EKLWKEMERRKVTPDKVSYTTVISA 513
+L+ +M + + PD Y+ ++ +
Sbjct: 485 FQLYDDMLKAGLIPDDSLYSALVGS 509
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/507 (21%), Positives = 216/507 (42%), Gaps = 8/507 (1%)
Query: 94 PQTQELAYDYYNEAKKLPEFRPEKSTL---KLLIRYLVQSKKWDSIVSLSEDFKIYNVLP 150
P A D ++ + P T K+LI LV K++ + +SL + ++ V P
Sbjct: 33 PPLTHNADDAVSQFNHMFHVHPTPHTFHFNKILIS-LVNVKRYPTAISLYKQMELSEVEP 91
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVY 209
D T + ++ + +A + + + G + + N+ M G + +
Sbjct: 92 DYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFH 151
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+K+ + G L Y ++ KIG++ AA+ L + + P + +Y ++ D L
Sbjct: 152 DKVLAQGFRLSGISYGILINGVCKIGETR--AAIRLLRRIERWSIRP-NVVIYSMIIDRL 208
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
K EA + +M KGI D Y+ L+ F + ++ A +L E + + D
Sbjct: 209 CKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDI 268
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
LV +EG V++ +V+ M A + + + +++G+ A +V+
Sbjct: 269 YTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYT 328
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ G P Y+ +IN C+I +A +F E+ QK V Y+S++ K+GR
Sbjct: 329 MTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGR 388
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
I L +M +G P+V YN+L+D + +L + L+ +M+ + + P+ ++T
Sbjct: 389 ISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTI 448
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
++ + ++F+ + G ++ +M+ K ++E + L M+ G
Sbjct: 449 LLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNG 508
Query: 570 TKLDERLYHSAMNALRDAGLQMQAQWL 596
D + + A D +A+ L
Sbjct: 509 CISDAVTFEIMIRAFFDKDENDKAEKL 535
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 91/213 (42%), Gaps = 4/213 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ ++I L + K+ D ++L E+ N++PD T + L+ ++ + L
Sbjct: 336 PDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDL 395
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ G+ ++ +N+ + K I ++ KMK I + + +++ K
Sbjct: 396 FDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCK 455
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G + F + ++ + Y ++ + L K G EAL M++ G + D
Sbjct: 456 VGRLKNALEFFQDLLTK---GYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISD 512
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ +I +F E AE+L +E +G+L
Sbjct: 513 AVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 169/342 (49%), Gaps = 15/342 (4%)
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD---------SL 269
LDS +++ +K+G S + + LF L S P H LCD
Sbjct: 30 LDSRALAALLKELHKVGLSNRASELF-----DWLRSLP-DNHELAHLCDVYTYTTIISQC 83
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
G + +AL+ +M+ G++ + Y++L+ E++LA +++ + +G +
Sbjct: 84 GSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYGQLLREGCTPNL 143
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
L+ ++ + G ++ + V++++++ K I++ ++ A++VYE+
Sbjct: 144 VTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYER 203
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+++ G P TY ++I+AY + +A ++F +M ++G ++ V+ YSS+++ K GR
Sbjct: 204 MLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGR 263
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ A+ L+ +M C+PN +N+L+ + + + ++++M PD VSY
Sbjct: 264 WQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAI 323
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+ISA++R ++ ++ +E + G D + +++ ++
Sbjct: 324 LISAFDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTR 365
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 150/325 (46%), Gaps = 5/325 (1%)
Query: 269 LGKSGRA---FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
+G S RA F+ L+ D E L D Y ++I S +++ A EL E G+
Sbjct: 45 VGLSNRASELFDWLRSLPDNHELAHLCDVYTYTTIISQCGSHQQLRKALELVAEMRGHGV 104
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-AV 384
+ + L+ + I+ +E LDV + + ++ I+ + G W AV
Sbjct: 105 VCNVHTYSALMNVCIKANELELALDVYGQLLREGCT-PNLVTYNILIDIHGKMGNWQEAV 163
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+V + L QG P TY +I++A R A +V+ M G Y+++++ Y
Sbjct: 164 QVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATTYTALISAY 223
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
GKTG+I +A+ + M +GCE NV Y+SL+ +A + +L EM R P+
Sbjct: 224 GKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLALELLDEMHRDNCKPNT 283
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
V++ ++SA + ++ + + G D I++ F + +Q ++ L +
Sbjct: 284 VTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRGNQWCRALQALDE 343
Query: 565 MKSEGTKLDERLYHSAMNALRDAGL 589
M+ +G + D +Y+ + AL +G+
Sbjct: 344 MQGQGHRPDVGVYNVVIEALTRSGV 368
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 138/315 (43%), Gaps = 43/315 (13%)
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+ L + + + V+ + HT S L+ C++A + ++A + + +G L+ +N +
Sbjct: 93 LELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYGQLLREGCTPNLVTYNILIDI 152
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL-DS 254
+ K+ + + V + ++ G + Y I+ A + G E ++ R L D
Sbjct: 153 HGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVY----ERMLADG 208
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+ Y L + GK+G+ EAL+ F+DM +G + Y+SLI + +LA
Sbjct: 209 AQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLAL 268
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
EL E M RD C + + NA L +CA
Sbjct: 269 ELLDE-----MHRDN--CKPNTVTF-----------------NALLS-----ACA----- 294
Query: 375 SKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+ G W AA V+EQ+ S GC P V+YA +I+A+ R + +A + EMQ +G
Sbjct: 295 --QGGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRGNQWCRALQALDEMQGQGHRPD 352
Query: 434 VVAYSSMVAMYGKTG 448
V Y+ ++ ++G
Sbjct: 353 VGVYNVVIEALTRSG 367
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 65/347 (18%), Positives = 126/347 (36%), Gaps = 78/347 (22%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
ELA D Y + + P T +LI + W V + + + P+ T +
Sbjct: 125 ELALDVYGQLLR-EGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNT 183
Query: 158 LVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGI 217
++++C R+ + + A + VYE+M + G
Sbjct: 184 ILSACNRSGQPEHA----------------------------------LRVYERMLADGA 209
Query: 218 VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFE 277
+ Y ++ AY K G E+ +F + R + + Y L + K+GR
Sbjct: 210 QPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVIT---YSSLISACEKAGRWQL 266
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
AL+ +M + + +L+ + A + K A+++F
Sbjct: 267 ALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVF-------------------- 306
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCI 396
E M + K D +S AI ++ F + + A++ +++ QG
Sbjct: 307 ---------------EQMPSCGCK-PDAVSYAILISAFDRGNQWCRALQALDEMQGQGHR 350
Query: 397 PGQVTYASIINAYCRIALYS---KAEKVFIEMQQKGFDKCVVAYSSM 440
P Y +I A R + S KA ++F ++G +C A +++
Sbjct: 351 PDVGVYNVVIEALTRSGVLSAQLKAAQIFQAATRQGQLRCDAASANL 397
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 187/415 (45%), Gaps = 4/415 (0%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
A L+ DG + + A++S M GY + ++V+E++K Y ++
Sbjct: 401 AEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLIN 460
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
Y KIG K A+ E +S + + Y +L A + F +M + G
Sbjct: 461 LYVKIGKVAKAIAISKEMESSGIKH---NNKTYSMLISGFIHLHDFTNAFRIFEEMLKSG 517
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
+ D +IY LI +F + + A + ++ +++ M ++ + G +++ L
Sbjct: 518 LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRAL 577
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
D+++ M+ + + A+++G ++ AV V ++ G P + TY I+ Y
Sbjct: 578 DILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGY 637
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+KA + F ++++ G V Y +++ K+GR++ A+ + +M ++ N
Sbjct: 638 AATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNT 697
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
++YN L+D R ++ + L K+M+ V P+ +YT+ I+A +A + +E
Sbjct: 698 FVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDE 757
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G + ++ +++ S + +K ++MK G K DE YH + +L
Sbjct: 758 MSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSL 812
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/428 (20%), Positives = 185/428 (43%), Gaps = 54/428 (12%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
E+MK+ GI L Y ++ + KI D++ LF E K+ D + +Y + +
Sbjct: 336 EEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGD---LNGIIYSNIIHAH 392
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
+SG A + +M+E GI Y S++ + I + K +F+ R
Sbjct: 393 CQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFE--------RLK 444
Query: 330 EVCLK--------LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E C L+ +Y++ G V K + + + M+++ +K ++ +++GF +
Sbjct: 445 ECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFT 504
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A +++E+++ G P + Y +I A+C++ +A ++ +MQ++ A+ ++
Sbjct: 505 NAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPII 564
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ G ++ A+ ++ M+ GC P V YN+L+ R + + + +M +T
Sbjct: 565 EGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGIT 624
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG------------------GVIDRAIA- 542
P++ +YT ++ Y + +++ + + G G + A+A
Sbjct: 625 PNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAV 684
Query: 543 ----------------GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
I++ +++ + E L++ MK +G + Y S +NA
Sbjct: 685 TREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCK 744
Query: 587 AGLQMQAQ 594
AG +AQ
Sbjct: 745 AGDMQRAQ 752
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/442 (19%), Positives = 179/442 (40%), Gaps = 29/442 (6%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P + LI V+ K +++S++ + + + T S L++ + F A
Sbjct: 448 FTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAF 507
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + + G + +N + + K+ I + EKM+ + + + I+E +
Sbjct: 508 RIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGF 567
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
GD ++ AL + R+ P + Y L L + + A+ M GI
Sbjct: 568 AVAGDMKR--ALDILDLMRRSGCAP-TVMTYNALIHGLIRKNQVERAVSVLNKMSIAGIT 624
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y ++ +A+ ++ A E F + +E G+ D + L+ + G ++ L V
Sbjct: 625 PNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAV 684
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
M + K+ + + +++G+++R W A + +Q+ G P TY S INA C+
Sbjct: 685 TREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCK 744
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+A+ V EM G + Y++++ + + A+ +MK G +P+
Sbjct: 745 AGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAA 804
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV------- 524
Y+ L+ + R + +YT ++S E D+ V
Sbjct: 805 YHCLV----------------TSLLSRATVMEGSTYTGILSVCREMFENDLTVDMRTAVH 848
Query: 525 --KFYNEFRMNGGVIDRAIAGI 544
++ ++ M GG + A+ I
Sbjct: 849 WSRWLHKIEMTGGALTEALQRI 870
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 133/292 (45%)
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
+ +I +A + A F+ +G+ + V LV Y + L E MK
Sbjct: 280 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMK 339
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
++++ +++GF K +A ++++ + + Y++II+A+C+
Sbjct: 340 AEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMD 399
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+AE++ EM++ G D + AY SM+ Y + + + ++K P++ Y L+
Sbjct: 400 RAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLI 459
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+++ + + + + KEME + + +Y+ +IS + +F + + E +G
Sbjct: 460 NLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQ 519
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
DRAI +++ F K+ ++ +++L+ M+ E + R + + AG
Sbjct: 520 PDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAG 571
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 71/160 (44%), Gaps = 4/160 (2%)
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
S+ + A V +E++ P + + +I Y + A F M+ +G +
Sbjct: 257 SRPEDWQAVVSAFERIPK----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNA 312
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
++S+V Y +R A+ +MKA+G E + Y+ L+ G+ + + + L+KE
Sbjct: 313 FVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKE 372
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+ + + Y+ +I A+ ++ D + +E +G
Sbjct: 373 AKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDG 412
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 148/319 (46%), Gaps = 42/319 (13%)
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS--IYASLICSFASIT 308
K+++ S + +C G+ R F++L+ F MK+ DPS Y +++
Sbjct: 78 KIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDC--DPSQKAYVTVLAILVEEN 135
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
++ LA + +K E G+ P V VL+ K L C +
Sbjct: 136 QLNLAFKFYKNMREIGL--PPTVASLNVLI--------KAL---------------CRND 170
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
V+ A +K++ ++ +GC P TY ++I+ CR +A+K+F EM +K
Sbjct: 171 GTVD---------AGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR-- 486
VV Y+S++ + + +AM V +MK KG EPNV+ Y+SLMD G K+ R
Sbjct: 222 DCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMD--GLCKDGRSL 279
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
Q +L++ M R P+ V+YTT+I+ + ++ V+ + + G D + G ++
Sbjct: 280 QAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339
Query: 547 GVFSKLSQIEELVKLLQDM 565
F +S+ E L +M
Sbjct: 340 SGFCAVSKFREAANFLDEM 358
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/418 (20%), Positives = 176/418 (42%), Gaps = 33/418 (7%)
Query: 149 LPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTIL 207
L D + +V+ V A KFK A ++ ++ I + ++ S GY ++H + ++
Sbjct: 48 LHDQSSFGYMVSRLVSANKFKAAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLR 107
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ KMK Y ++ + ++ F K+ + P + +L
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILV---EENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 268 SLGKSGRAFEA-LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+L ++ +A LK F +M ++G D Y +LI + A++LF E EK
Sbjct: 165 ALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD-- 222
Query: 327 RDPEVCLKLVLMYIE--EGL-----VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
C V+ Y GL V++ + VE MK ++ + ++++G K
Sbjct: 223 -----CAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGR 277
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A++++E ++++GC P VTY ++I C+ +A ++ M +G Y
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN----------LRQVE 489
+++ + + R+A + +M G PN +N +H + N +
Sbjct: 338 VISGFCAVSKFREAANFLDEMILGGITPNRLTWN----IHVKTSNEVVRGLCTNYPSRAF 393
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
L+ M R ++ + + +++ + EF V+ +E +G + ++ +++G
Sbjct: 394 TLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLIG 451
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 97/224 (43%), Gaps = 13/224 (5%)
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ AA + ++ + C+ + SI Y R+ + +VF +M+ D AY +
Sbjct: 67 FKAAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVT 126
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE-KLWKEMERR 498
++A+ + ++ A M+ G P V N L+ R K++ EM +R
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKR 186
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS----- 553
PD +Y T+IS R D K + E ++++ A +V S ++
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTE------MVEKDCAPTVVTYTSLINGLCGS 240
Query: 554 -QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++E ++ +++MK +G + + Y S M+ L G +QA L
Sbjct: 241 KNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/343 (19%), Positives = 140/343 (40%), Gaps = 23/343 (6%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW-DSI 136
P K + + L ++++ Q LA+ +Y +++ P ++L +LI+ L ++ D+
Sbjct: 119 PSQKAYVTVLAILVEENQLN-LAFKFYKNMREIG-LPPTVASLNVLIKALCRNDGTVDAG 176
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI-TDGEIALLAFNSAMGG 195
+ + + PD++T L++ R + A L + D ++ + S + G
Sbjct: 177 LKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ E+MK GI + Y +M+ K G S + LF +R
Sbjct: 237 LCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y L L K + EA++ M +G+ D +Y +I F ++++ + A
Sbjct: 297 MVT---YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAAN 353
Query: 316 LFKEAEEKGMLRD-----------PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
E G+ + EV L Y + + SM++ + +
Sbjct: 354 FLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTNY-----PSRAFTLYLSMRSRGISVEV 408
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
++V K+ + AV++ +++++ GCIP + T+ +I
Sbjct: 409 ETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLIG 451
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/501 (20%), Positives = 222/501 (44%), Gaps = 36/501 (7%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
+F+ + +I L+++ +D +S + + +P+ T L++ ++ ++
Sbjct: 271 DFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWC 330
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG---------IVLDS 221
++ + +T+G FNS + Y Y + +M + G I + S
Sbjct: 331 KRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGS 390
Query: 222 GCYCQIMEAYYKIGDSEKVAALFL--ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
C + + + + +EK+ L C K++ F+ + LC +GK +AF+ +
Sbjct: 391 ICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA----RCLC-GVGKFDKAFQLI 445
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
K +M KG + D S Y+ +I T+V+ A LF+E + G+ D L+ +
Sbjct: 446 K---EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 502
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ GL+E+ + E M++ + A+++ + K + A ++ +++ GC P
Sbjct: 503 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 562
Query: 400 VTYASIINAYCRIALYSKAEKVFIEM----------------QQKGFDKCVVAYSSMVAM 443
VTY ++++ C+ SKA +V+ ++ + VV Y ++V
Sbjct: 563 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 622
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K ++ A L+ M + GCEPN +Y++L+D +A + ++++ +M + P
Sbjct: 623 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 682
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+YT++I + D+ +K ++ + + M+ ++ + E+ +KLL
Sbjct: 683 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLS 742
Query: 564 DMKSEGTKLDERLYHSAMNAL 584
M+ +G + Y + ++ L
Sbjct: 743 LMEEKGCSPNVVTYTALIDGL 763
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 155/365 (42%), Gaps = 22/365 (6%)
Query: 169 KIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
KI +L ++ + F + G K + I ++M G V D+ Y +++
Sbjct: 408 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLI---KEMMRKGFVPDTSTYSKVI 464
Query: 229 EAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
EK LF E K + TP + Y IL DS K+G +A F +M+
Sbjct: 465 TFLCHATKVEKAFLLFQEMK--MVGVTP-DVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 521
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
G Y +LI ++ +V A ++F + G + LV + G + K
Sbjct: 522 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 581
Query: 349 LDVVESMKNAK----------------LKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
+V + L + A+V+G K A ++ + ++S
Sbjct: 582 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 641
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
GC P + Y ++I+ +C+ A++VF++M + G+ V Y+S++ K GR+
Sbjct: 642 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 701
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
AM ++++M C PNV Y +++D R + KL ME + +P+ V+YT +I
Sbjct: 702 AMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID 761
Query: 513 AYNRA 517
++
Sbjct: 762 GLGQS 766
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 158/404 (39%), Gaps = 45/404 (11%)
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK----- 288
+ D+ ++ A F R++ + + Y L D+LG GRA +A + R++ E+
Sbjct: 115 VRDAPELCARFFLWAERQVGYS-HTGACYDALADALGFDGRARDAERLLREIGEEDREVL 173
Query: 289 ------------------------GILED----PS--IYASLICSFASITEVKLAEELFK 318
G L+D PS Y +L+ +S +V L + K
Sbjct: 174 GRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQK 233
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E E G D +EG LD++E K+ + +++G +
Sbjct: 234 EMSESGFCMDRFTVGCFAHALCKEGRWADALDMIE---REDFKLDTVLCTHMISGLMEAS 290
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ A+ ++ CIP VTY ++++ + + +++ M +G + ++
Sbjct: 291 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN 350
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM-DMHGRAK-----NLRQVEKLW 492
S+V Y A L+ +M GC P +YN + + G+ K L EK++
Sbjct: 351 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIY 410
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
EM +KV+ +FD + E G V D + ++
Sbjct: 411 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 470
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+++E+ L Q+MK G D Y +++ AGL QAQWL
Sbjct: 471 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 514
>gi|413917168|gb|AFW57100.1| hypothetical protein ZEAMMB73_992270 [Zea mays]
Length = 442
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 165/393 (41%), Gaps = 70/393 (17%)
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+ +K + F ++Y IL S + G +A++ + M + +P I ++I F+++
Sbjct: 43 REKKWKDSAFEDNLYHILICSCKEGGNYNDAVRIYNQMPKSETHPNPRISCTMIDVFSTM 102
Query: 308 TEVKLAEELFKE------------------------------------AEEKGMLRDPEV 331
AE + E ++K ++ D +
Sbjct: 103 ERFADAETILLELKASASVLDMIAYSVIVRMYIKARRLKDACSVLAEMEKQKEIIPDKYL 162
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
L ++ Y + GL+EK D ++ +++K + + I+N + +++++++
Sbjct: 163 FLDMLRTYQKCGLLEKLADTYYWIRKSQVKCDEAMYNCIINCCGRAIPVDELSRIFDEML 222
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIE--------------------------- 424
QG + VT+ +++ Y + L+++AEKVFI
Sbjct: 223 QQGHLANTVTFNVLLDIYGKAGLFNRAEKVFIMARKQGLADIISYNTIIAAYAKGGNFLS 282
Query: 425 -------MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
MQ GF + AY+ M+ YGK GR+ + ++ KMK C+ + + YN +++
Sbjct: 283 MNYFVQMMQDAGFPVSLEAYNCMLDAYGKAGRLEEFASVLQKMKRAKCKFDHYTYNIMIN 342
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
++GR ++ V + E++ R V PD SY T+I AY AR + VK E R+ G
Sbjct: 343 IYGRRGWIQDVSNVLAELKDRGVEPDLYSYNTLIKAYGIARMPEDAVKLMQEMRVKGISP 402
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
DR ++ + E VK MK G
Sbjct: 403 DRVTYANLIAALQRNENFLEAVKWSLWMKQTGV 435
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 135/365 (36%), Gaps = 76/365 (20%)
Query: 144 KIYNVLPDAHTCSRLVASCV------RARKFKIANT-LLQVFITDGEIALLAFNSAMGGY 196
+IYN +P + T SC +F A T LL++ + + ++A++ + Y
Sbjct: 75 RIYNQMPKSETHPNPRISCTMIDVFSTMERFADAETILLELKASASVLDMIAYSVIVRMY 134
Query: 197 NKLHMYYSTILVYEKM-KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF----------- 244
K V +M K I+ D + ++ Y K G EK+A +
Sbjct: 135 IKARRLKDACSVLAEMEKQKEIIPDKYLFLDMLRTYQKCGLLEKLADTYYWIRKSQVKCD 194
Query: 245 -------LECKSRKLDSTPFS--------------THMYKILCDSLGKSGRAFEALKFFR 283
+ C R + S T + +L D GK+G A K F
Sbjct: 195 EAMYNCIINCCGRAIPVDELSRIFDEMLQQGHLANTVTFNVLLDIYGKAGLFNRAEKVFI 254
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+++G L D Y ++I ++A + ++ G E ++ Y + G
Sbjct: 255 MARKQG-LADIISYNTIIAAYAKGGNFLSMNYFVQMMQDAGFPVSLEAYNCMLDAYGKAG 313
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR---------------RGYWA------ 382
+E+ V++ MK AK K ++N + +R RG
Sbjct: 314 RLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWIQDVSNVLAELKDRGVEPDLYSYN 373
Query: 383 --------------AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
AVK+ +++ +G P +VTYA++I A R + +A K + M+Q
Sbjct: 374 TLIKAYGIARMPEDAVKLMQEMRVKGISPDRVTYANLIAALQRNENFLEAVKWSLWMKQT 433
Query: 429 GFDKC 433
G C
Sbjct: 434 GVAGC 438
>gi|255661148|gb|ACU25743.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 425
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 160/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ ++ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 151/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G+ + L+ MY+E + L + M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 162/353 (45%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG+ ++ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ +A + + GRI +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + EFD Y E + G V
Sbjct: 370 KYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 142/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDIAIHILAGAGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A ++NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANDVYMEMQEVG 420
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|147771903|emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
Length = 1313
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 12/372 (3%)
Query: 221 SGCYCQIMEAYYKIGDSEKVAALFLECK--SRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
+ Y +++ Y K G + A +F E +D+ F+T +Y + G G EA
Sbjct: 650 TATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIY-----TCGSHGHLSEA 704
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+M+E+GI D Y + +A + A + +++ E G+ P+V ++
Sbjct: 705 ETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLF--PDVVTHRAVL 762
Query: 339 YI--EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
++ E +V + V+ MK +++++ D S +V G K++ +
Sbjct: 763 HVLCERNMVGEVETVIAEMKRSRVRV-DEHSIPVVIKMYVNEGLLDKAKIFLEEHLLEDE 821
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
T +II+AY L+++AE VFI + G K VV Y+ MV YGK A L
Sbjct: 822 LSSRTRVAIIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSL 881
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
M+ G PN YNSL+ M + + + EM++ P ++++ VI+ Y R
Sbjct: 882 FKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQCLTFSAVIACYAR 941
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
V Y E G + + G ++ FS+ +EE + + M G ++ +
Sbjct: 942 LGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIV 1001
Query: 577 YHSAMNALRDAG 588
S + A G
Sbjct: 1002 LTSLIKAYSKVG 1013
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/418 (19%), Positives = 173/418 (41%), Gaps = 41/418 (9%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N+ + Y K V+ +M G+ +D+ + ++ G + L E +
Sbjct: 653 YNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAETLLTEME 712
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
R + T Y I G ALK +R ++E G+ D + +++
Sbjct: 713 ERGISP---DTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCERN 769
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
V E + E + + D ++ MY+ EGL++K + + ++S
Sbjct: 770 MVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKA-KIFLEEHLLEDELSSRTRV 828
Query: 369 AIVNGFSKRRGYWA------------------------------------AVKVYEQLIS 392
AI++ ++++ G WA A +++ + +
Sbjct: 829 AIIDAYAEK-GLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLFKGMRN 887
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
G P + TY S+I + L +A + EMQ+ GF + +S+++A Y + GR+ D
Sbjct: 888 HGTWPNESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQCLTFSAVIACYARLGRLPD 947
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A+ + +M G +PN +Y SL++ N+ + +++M+ ++ +++ T++I
Sbjct: 948 AVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIK 1007
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
AY++ + Y + G D + M+ +++ L + E + D++ +G+
Sbjct: 1008 AYSKVGCLEGAKTLYEGMKDLEGGPDIVASNSMINLYADLGLVSEAKLIFDDLRQKGS 1065
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 141/329 (42%), Gaps = 1/329 (0%)
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
+ D+ + G EA F ++ G +D Y ++ ++ A LFK G
Sbjct: 830 IIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLFKGMRNHG 889
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ L+ M+ LV++ D++ M+ K A++ +++ AV
Sbjct: 890 TWPNESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQCLTFSAVIACYARLGRLPDAV 949
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
VYE+++ G P +V Y S+IN + +A F +M + G + +S++ Y
Sbjct: 950 GVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIKAY 1009
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K G + A L MK P++ NS+++++ + + + ++ ++ R+K + D
Sbjct: 1010 SKVGCLEGAKTLYEGMKDLEGGPDIVASNSMINLYADLGLVSEAKLIFDDL-RQKGSADG 1068
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
VS+ T++ Y D + +E + +G + D A ++ ++ Q+ +LL +
Sbjct: 1069 VSFATMMYLYKNLGMLDEAIDVADEMKQSGFLRDCASFNKVMACYATNGQLSACGELLHE 1128
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQA 593
M S D + L+ GL +A
Sbjct: 1129 MISRRILPDTGTFKVMFTVLKKGGLPTEA 1157
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 133/311 (42%), Gaps = 7/311 (2%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y ++ + GK+ +A F+ M+ G + S Y SLI F+ V A ++ E +
Sbjct: 862 YNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARDILAEMQ 921
Query: 322 EKGMLRDPEVCLK---LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
+ G P+ CL ++ Y G + + V E M +K ++ + +++NGFS+
Sbjct: 922 KMGF--KPQ-CLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETG 978
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A+ + ++ G Q+ S+I AY ++ A+ ++ M+ +VA +
Sbjct: 979 NVEEALCYFRKMDEFGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIVASN 1038
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
SM+ +Y G + +A + ++ KG V + ++M ++ L + + EM++
Sbjct: 1039 SMINLYADLGLVSEAKLIFDDLRQKGSADGV-SFATMMYLYKNLGMLDEAIDVADEMKQS 1097
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
D S+ V++ Y + C + +E + D +M V K E
Sbjct: 1098 GFLRDCASFNKVMACYATNGQLSACGELLHEMISRRILPDTGTFKVMFTVLKKGGLPTEA 1157
Query: 559 VKLLQDMKSEG 569
V L+ EG
Sbjct: 1158 VTQLESSYQEG 1168
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 187/441 (42%), Gaps = 48/441 (10%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
++++ ++K +D SL + + + P+ T + L+ A +L
Sbjct: 864 VMVKAYGKAKLYDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARDILAEMQKM 923
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G + L F++ + Y +L + VYE+M G+ + Y ++ + + G+ E+
Sbjct: 924 GFKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEA 983
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE--KGILEDPSIYA 298
C RK+D F +I+ SL K+ L+ + + E K + P I A
Sbjct: 984 L-----CYFRKMDE--FGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIVA 1036
Query: 299 S--LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
S +I +A + V A+ +F + +KG D ++ +Y G++++ +DV + MK
Sbjct: 1037 SNSMINLYADLGLVSEAKLIFDDLRQKGS-ADGVSFATMMYLYKNLGMLDEAIDVADEMK 1095
Query: 357 NAKLKISDCIS------CAIVNG------------FSKR-RGYWAAVKVYEQLISQGCIP 397
+ + DC S C NG S+R KV ++ +G +P
Sbjct: 1096 QSGF-LRDCASFNKVMACYATNGQLSACGELLHEMISRRILPDTGTFKVMFTVLKKGGLP 1154
Query: 398 GQVT---------------YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
+ A I + + + L++ A + D Y+ +
Sbjct: 1155 TEAVTQLESSYQEGKPYARQAVITSVFSTVGLHAFALESCETFLNAEVDLDSSFYNVAIY 1214
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
YG +G I A+ + KM+ +G EP++ Y +L +G+A L +++++ +++ R++ P
Sbjct: 1215 AYGASGSIDKALKMFMKMQDEGLEPDLVTYINLAGCYGKAGMLEGLKRIYSQLKYREIEP 1274
Query: 503 DKVSYTTVISAYNRAREFDMC 523
++ + +I AY A+ D+
Sbjct: 1275 NESLFKAIIDAYRSAKRHDLA 1295
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%)
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ Y++++ +YGK GR++DA + A+M G + +N+++ G +L + E L
Sbjct: 648 RLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAETL 707
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
EME R ++PD +Y +S Y D +K Y + R G D ++ V +
Sbjct: 708 LTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCE 767
Query: 552 LSQIEELVKLLQDMKSEGTKLDE 574
+ + E+ ++ +MK ++DE
Sbjct: 768 RNMVGEVETVIAEMKRSRVRVDE 790
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 128/294 (43%), Gaps = 4/294 (1%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y +++AY K +K +LF K + T + Y L EA
Sbjct: 862 YNVMVKAYGKAKLYDKAFSLF---KGMRNHGTWPNESTYNSLIQMFSGGDLVDEARDILA 918
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+M++ G ++++I +A + + A +++E G+ + V L+ + E G
Sbjct: 919 EMQKMGFKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETG 978
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
VE+ L M + + + +++ +SK A +YE + P V
Sbjct: 979 NVEEALCYFRKMDEFGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIVASN 1038
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
S+IN Y + L S+A+ +F +++QKG V++++M+ +Y G + +A+ + +MK
Sbjct: 1039 SMINLYADLGLVSEAKLIFDDLRQKGSADG-VSFATMMYLYKNLGMLDEAIDVADEMKQS 1097
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
G + +N +M + L +L EM R++ PD ++ + + +
Sbjct: 1098 GFLRDCASFNKVMACYATNGQLSACGELLHEMISRRILPDTGTFKVMFTVLKKG 1151
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 132/311 (42%), Gaps = 8/311 (2%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ S + Y+K+ +YE MK D ++ Y +G + +F +
Sbjct: 1000 IVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIVASNSMINLYADLGLVSEAKLIFDD 1059
Query: 247 CKSR-KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ + D F+T MY L +LG EA+ +MK+ G L D + + ++ +A
Sbjct: 1060 LRQKGSADGVSFATMMY--LYKNLGMLD---EAIDVADEMKQSGFLRDCASFNKVMACYA 1114
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ ++ EL E + +L D + + + GL + + +ES +
Sbjct: 1115 TNGQLSACGELLHEMISRRILPDTGTFKVMFTVLKKGGLPTEAVTQLESSYQEGKPYAR- 1173
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
I + FS + A++ E ++ Y I AY KA K+F++M
Sbjct: 1174 -QAVITSVFSTVGLHAFALESCETFLNAEVDLDSSFYNVAIYAYGASGSIDKALKMFMKM 1232
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
Q +G + +V Y ++ YGK G + + +++K + EPN ++ +++D + AK
Sbjct: 1233 QDEGLEPDLVTYINLAGCYGKAGMLEGLKRIYSQLKYREIEPNESLFKAIIDAYRSAKRH 1292
Query: 486 RQVEKLWKEME 496
E + +EM+
Sbjct: 1293 DLAELVSQEMK 1303
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 39/192 (20%)
Query: 343 GLVEKTLDVVESMKNAKLKISDC--ISCAIVNGFSKRRGYWAAV-KVYEQLISQ-GCIPG 398
G++ L +ES N + +S C +S K + W V +V+E + SQ +P
Sbjct: 429 GVLPSILRALESEXNIEDTLSSCGKLSPKEQTVILKEQSSWERVLRVFEWIKSQEDYVPN 488
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+ Y ++ R + + +IEM + G Y +V +YGK G +++A+
Sbjct: 489 VIHYNVVLRVLGRAQKWDELRLCWIEMAKNGVLPTNNTYGMLVDVYGKAGLVKEAL---- 544
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+WI K M+ R V PD+V+ TV+ A
Sbjct: 545 ----------LWI---------------------KHMKLRGVFPDEVTMNTVVRVLKDAG 573
Query: 519 EFDMCVKFYNEF 530
EFD +FY ++
Sbjct: 574 EFDWADRFYRDW 585
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 178/388 (45%), Gaps = 9/388 (2%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+L+ L + ++ D + +D K+ + PD +T + ++ + + + + L + +T
Sbjct: 279 MLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTK 338
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G L+A+N+ + +K M IL++ M + Y I+ G ++
Sbjct: 339 GCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRL 398
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
+ LE ++ ++ + +Y L +L K G + EA + F +M D Y S+
Sbjct: 399 DEV-LEVSNKFINKS-----IYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISM 452
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ S + A EL + EKG+ D + ++ + V D+ E MK
Sbjct: 453 LESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDG- 511
Query: 361 KISDCISCAIVNGFSKRRG-YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
D + I+ R G AV+V+E+L S C P ++Y S+IN + +A
Sbjct: 512 PFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAH 571
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
F+EMQ KG + VV YS+++ +GKT ++ A L +M +GC PN+ YN L+D
Sbjct: 572 MRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCL 631
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSY 507
RA + L+ ++ + +TPD ++Y
Sbjct: 632 ERAGRTAETVDLYAKLREQGLTPDSITY 659
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 168/382 (43%), Gaps = 8/382 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY +M S G LD Y +++A K ++ +F K KL + Y I+
Sbjct: 261 VYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVF---KDMKLKHCNPDEYTYTIMIR 317
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK GRA E+L F +M KG + Y ++I + + V A LF K R
Sbjct: 318 MTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMI-KNNCR 376
Query: 328 DPEVCLKLVL-MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
E ++L + + EG + + +V+E I+ I +V SK A ++
Sbjct: 377 PNEFTYSIILNVLVAEGQLGRLDEVLEVSNKF---INKSIYAYLVRTLSKLGHSSEAHRL 433
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+ + S + Y S++ + CR +A ++ ++ +KG + Y+++++ GK
Sbjct: 434 FCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGK 493
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
++ L KMK G P+++ YN L+ GR +++ ++++E+E PD +S
Sbjct: 494 LKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIIS 553
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y ++I+ + + D + E + G D ++ F K ++E L M
Sbjct: 554 YNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMI 613
Query: 567 SEGTKLDERLYHSAMNALRDAG 588
++G + Y+ ++ L AG
Sbjct: 614 TQGCCPNIVTYNILLDCLERAG 635
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 97/230 (42%), Gaps = 3/230 (1%)
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
D Y ++E+ + G + + L + + + + T MY + +LGK +
Sbjct: 445 DRDAYISMLESLCRGGKTVEAIELLSKVHEKGIST---DTMMYNTVLSTLGKLKQVSHLH 501
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
+ MK+ G D Y LI S + +VK A E+F+E E D L+
Sbjct: 502 DLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCL 561
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ G V++ M++ L ++ F K A +++++I+QGC P
Sbjct: 562 GKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNI 621
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
VTY +++ R ++ ++ +++++G + Y+ + + + R
Sbjct: 622 VTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITYAILDRLQSGSNR 671
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 111/514 (21%), Positives = 218/514 (42%), Gaps = 27/514 (5%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A D + E + RP L + ++K++D ++ L + ++ + + +T S ++
Sbjct: 56 AVDLFQEMTR-SRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG-- 216
C R RK +A + + I G E + F++ + G + + ++M G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 217 ---IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH------MYKILCD 267
I L++ + K+ D A L ++ ++ T F + + K++C
Sbjct: 175 PTLITLNALVNGLCLNG--KVSD----AVLLID----RMVETGFQPNEVTYGPVLKVMC- 223
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
KSG+ A++ R M+E+ I D Y+ +I + A LF E E KG
Sbjct: 224 ---KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D + L+ + G + ++ M K+ A+++ F K A +++
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++I +G P VTY S+I+ +C+ KA + M KG + ++ ++ Y K
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
I D + L KM +G + YN+L+ L ++L++EM R+V PD VSY
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
++ E + ++ + + + +D I I++ S++++ L +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+G K D + Y+ + L G +A L + E
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 113/509 (22%), Positives = 198/509 (38%), Gaps = 100/509 (19%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+EL R + DA K+ + G+ KD A++ +NE + + F+ + LI
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN-AFNLFNEME-IKGFKADIIIYTTLI 289
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFK--------------- 169
R + +WD L D + PD S L+ V+ K +
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 170 --------------------IANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
AN +L + ++ G + FN + GY K ++ + +
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+ KM G+V D+ Y +++ + ++G E LF E SR++ S YKIL D
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS---YKILLDG 466
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L +G +AL+ F +++ + D IY +I + ++V A +LF KG+
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV--K 524
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
P+V KT ++ ++ G K+ A ++
Sbjct: 525 PDV---------------KTYNI------------------MIGGLCKKGSLSEADLLFR 551
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF--DKCVVAYS-SMVAMYG 445
++ G P TY +I A+ +K+ K+ E+++ GF D + ++ S +A
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARML 611
Query: 446 KTGR---------------------IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
K G + DA L MKA G +PNV YN+++
Sbjct: 612 KAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNM 671
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ QV + +M R P+ V+ +T IS
Sbjct: 672 ISQVPGVLDQMFERGCQPNAVTKSTFISG 700
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 163/347 (46%), Gaps = 17/347 (4%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L DSL K+G EA + M +G + + Y+ LI + + A EL +E
Sbjct: 119 YNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMT 178
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTL-----DVVESMKNAKLKIS-DCIS-CAIVNGF 374
K P + + +GL ++++ +++ S+++ L++S D ++ +++G
Sbjct: 179 RKSCDVLPNI---ITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 235
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A + +I+ G +P VTY +++N C+ +A + M KG V
Sbjct: 236 CKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDV 293
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE--KLW 492
+ YS +V + K R+ +A+ L+ M ++GC PNV +NS++D G K+ R E ++
Sbjct: 294 ITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID--GLCKSDRSGEAFQIA 351
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
++ R + PDKV++ +I+ +A F+ + E D G ++ K
Sbjct: 352 LQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKA 411
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG-LQMQAQWLQQ 598
Q+E +L M + G + Y+ ++ L +G ++ ++L++
Sbjct: 412 GQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEE 458
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 177/435 (40%), Gaps = 39/435 (8%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P+ ++SFL G+ K T E + P+ T LI L + + D
Sbjct: 185 LPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDE- 243
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
+ ++D +P+ T + LV +A K + A+ ++
Sbjct: 244 -ACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMI--------------------- 281
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
E M G+ D Y +++A+ K ++ L SR TP
Sbjct: 282 -------------ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG--CTP 326
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
I+ D L KS R+ EA + + + ++ D + LI + A L
Sbjct: 327 NVVTFNSII-DGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASAL 385
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F+E K M D L+ + G VE D+++ M N + + +V+G K
Sbjct: 386 FEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCK 445
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ E+++S GC+P +TY S++ A CR + A ++ +++ G+D V
Sbjct: 446 SGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVT 505
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y+ +V K+G+ A+ ++ +M KG +P+ + + + R+ NL +L + +
Sbjct: 506 YNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVL 565
Query: 497 RRKVTPDKVSYTTVI 511
+ + PD + ++++
Sbjct: 566 AKGMLPDATTCSSIL 580
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 100/479 (20%), Positives = 204/479 (42%), Gaps = 10/479 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +I L +S + + + L E+ PD T + L+ S +A + A L
Sbjct: 79 PTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRL 138
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKM--KSAGIVLDSGCYCQIMEAY 231
+ G + ++ ++ + G K+ + ++M KS ++ + Y ++
Sbjct: 139 HGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 198
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K + + L + L +P T + L D L K G+ EA DM G +
Sbjct: 199 CKQSMTAEACELMRSLRDGSLRVSP-DTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYV 255
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y +L+ +++ A + + +KG+ D LV + + V++ L++
Sbjct: 256 PNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 315
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+ M + + +I++G K A ++ Q+ ++ +P +VT+ +I C+
Sbjct: 316 LHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACK 375
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ +A +F EM K V+ + +++ K G++ A ++ M G PNV
Sbjct: 376 AGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 435
Query: 472 YNSLMDMHGRAKNLRQVE--KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
YN L +HG K+ R E + +EM P+ ++Y +++ A RA D ++ ++
Sbjct: 436 YNVL--VHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSK 493
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ G D I+V K + E+ + +L++M +G + D + + L +G
Sbjct: 494 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSG 552
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 166/400 (41%), Gaps = 11/400 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
++ M S G V + Y ++ K+G ++ L E + D P + Y D
Sbjct: 138 LHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLP-NIITYNSFLD 196
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L K EA + R +++ + P +F+++ + EA M+
Sbjct: 197 GLCKQSMTAEACELMRSLRDGSLRVSPDTV-----TFSTLIDGLCKCGQTDEACNDDMIA 251
Query: 328 DPEVCLKLVLMYIEEGL-----VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
V + + GL +E+ ++ESM + + +V+ F K
Sbjct: 252 GGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDE 311
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+++ + S+GC P VT+ SII+ C+ +A ++ +++ + V ++ ++A
Sbjct: 312 ALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIA 371
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
K G A L +M AK +P+V + +L+D +A + + M V P
Sbjct: 372 GACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 431
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ V+Y ++ ++ + +F E +G V + G +V + S+ ++ ++L+
Sbjct: 432 NVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLV 491
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+KS G D Y+ ++ L +G QA + + G
Sbjct: 492 SKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVG 531
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 160/382 (41%), Gaps = 47/382 (12%)
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFR-DMKEKGILEDPSIYASLICSFASITEVKL 312
S+ S Y I+ SL ++G AL+ FR +M G+ Y ++I E+
Sbjct: 40 SSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGA 99
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
ELF+E ++G D L+ + G +E+ + M + + ++N
Sbjct: 100 GMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLIN 159
Query: 373 GFSKRRGYWAAVKVYEQLISQGC--IPGQVTYASIINAYCRIALYSKAEKVFIEMQQ--- 427
G K A ++ +++ + C +P +TY S ++ C+ ++ ++A ++ ++
Sbjct: 160 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 219
Query: 428 -------------KGFDKC-------------------VVAYSSMVAMYGKTGRIRDAMW 455
G KC VV Y+++V K ++ A
Sbjct: 220 RVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHA 279
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY- 514
++ M KG P+V Y+ L+D +A + + +L M R TP+ V++ ++I
Sbjct: 280 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 339
Query: 515 --NRARE-FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+R+ E F + ++ YN V D+ I++ K E+ L ++M ++ +
Sbjct: 340 KSDRSGEAFQIALQVYNRML----VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQ 395
Query: 572 LDERLYHSAMNALRDAGLQMQA 593
D + + ++ L AG Q++A
Sbjct: 396 PDVMTFGALIDGLCKAG-QVEA 416
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 100/533 (18%), Positives = 203/533 (38%), Gaps = 38/533 (7%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELA--YDYYNEAKKLPEFRPEKSTLKLL 123
E+ RD P +++ ++G+ K + EL + + E K P+ T L
Sbjct: 71 EMARDG----VAPTIVTYNTIINGLCK---SNELGAGMELFEELVKRGH-HPDVVTYNTL 122
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI---T 180
I L ++ + L +P+ T S L+ + + A L+Q
Sbjct: 123 IDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSC 182
Query: 181 DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVL--DSGCYCQIMEAYYKIGDSE 238
D ++ +NS + G K M + ++ + + D+ + +++ K G ++
Sbjct: 183 DVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTD 242
Query: 239 KVAALFLECKSRKLDS--TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+ C + P + Y L + L K+ + A M +KG+ D
Sbjct: 243 EA------CNDDMIAGGYVP-NVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVIT 295
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVE-----KTL 349
Y+ L+ +F + V A EL +G C V+ + I +GL + +
Sbjct: 296 YSVLVDAFCKASRVDEALELLHGMASRG-------CTPNVVTFNSIIDGLCKSDRSGEAF 348
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+ + N L ++ G K + A ++E+++++ P +T+ ++I+
Sbjct: 349 QIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGL 408
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ A + M G VV Y+ +V K+GRI + + +M + GC P
Sbjct: 409 CKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPES 468
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
Y SL+ RA +L +++ PD V+Y ++ ++ + + + E
Sbjct: 469 MTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEE 528
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
G D G + + ++LL+ + ++G D S ++
Sbjct: 529 MVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 190/453 (41%), Gaps = 82/453 (18%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+L+ L ++ D + ED K + +PDA+T + L+ +A + + ++
Sbjct: 168 MLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSK 227
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMK---------SAGIVLD----------- 220
G + L+AFN+ + K M I V KM + I LD
Sbjct: 228 GCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRL 287
Query: 221 ------------SGCYCQIMEAYYKIGDSEKVAALFLECK----SRKLDSTPFSTHMYKI 264
Y ++++ K G + + +F C+ K D F + M ++
Sbjct: 288 NEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVF--CRMWNSHEKGDRDAFVS-MLEV 344
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
LC++ + EA+ M EKGI+ D +Y + + + +V LF + + G
Sbjct: 345 LCNA----EKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNG 400
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
++ D ++ Y GLV+K A
Sbjct: 401 IIPDVFTYNIMISSYGRVGLVDK-----------------------------------AS 425
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+++E + + C P VTY S+IN + +A +F EMQ+KG+D V YS ++ +
Sbjct: 426 ELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECF 485
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
GK+ ++ A L +M ++GC PN+ YN L+D R + KL++ M+++ + PD
Sbjct: 486 GKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDS 545
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
++Y+ + +R++ V+ R++G V+
Sbjct: 546 ITYSILERLESRSQR---TVRIRKPTRISGWVV 575
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 171/402 (42%), Gaps = 35/402 (8%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VYE+M+ G LD Y +++A K G ++ +F + K + ++ Y IL
Sbjct: 150 VYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYT---YTILIR 206
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV-KLAEELFKEAEEKGML 326
GK+GR + L FF +M KG + + + ++I + V K+ L K E
Sbjct: 207 MSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQP 266
Query: 327 RDPEVCLKLVLMYIEEGL--VEKTLDVVESMKN----AKLKISDCIS----------CAI 370
+ L ++ E L + + LD+ N + L S C S C +
Sbjct: 267 NQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRM 326
Query: 371 VNGFSK--RRGYWA-------------AVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
N K R + + A+ + + +G + Y + +A ++
Sbjct: 327 WNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQV 386
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
S +F +M+ G V Y+ M++ YG+ G + A L M+A C+P+V YNSL
Sbjct: 387 SFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSL 446
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
++ G+ +L + L+KEM+ + PD +Y+ +I + ++ + +M ++E G
Sbjct: 447 INCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGC 506
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ I++ + + EE KL + MK +G D Y
Sbjct: 507 TPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITY 548
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/412 (19%), Positives = 152/412 (36%), Gaps = 67/412 (16%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
S + YK + + +S + + + +M+ KG D Y L+ + A V A ++
Sbjct: 126 LSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQV 185
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F++ ++K + D L+ M + G K L + M + ++ I+ K
Sbjct: 186 FEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGK 245
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVT--------------------------------YAS 404
+ + V +++ C P Q T Y+
Sbjct: 246 NKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSY 305
Query: 405 IINAYCRIALYSKAEKVFIEM-----------------------------------QQKG 429
++ + C+ S+A VF M +KG
Sbjct: 306 LVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKG 365
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
V Y+ + + GK ++ L KMK G P+V+ YN ++ +GR + +
Sbjct: 366 IVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKAS 425
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+L++ ME PD V+Y ++I+ + + D + E + G D I++ F
Sbjct: 426 ELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECF 485
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
K +++E L +M SEG + Y+ ++ L G +A L + +
Sbjct: 486 GKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMK 537
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 112/291 (38%), Gaps = 32/291 (10%)
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V K V E M+ K+ +++ +K A +V+E + + C+P TY
Sbjct: 144 VSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTI 203
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I + SK F EM KG ++A+++++ GK + +++++KM
Sbjct: 204 LIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVEND 263
Query: 465 CEPNVWIYNSLMDM---HGRAKNLRQVEKLWKEMERRKV--------------------- 500
C+PN + Y+ +D+ G+ L +V + R +
Sbjct: 264 CQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVF 323
Query: 501 --------TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
D+ ++ +++ A + + + G V D + ++ KL
Sbjct: 324 CRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKL 383
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
Q+ + L MK+ G D Y+ +++ GL +A L + E +
Sbjct: 384 KQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEAS 434
>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
Length = 665
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 159/391 (40%), Gaps = 13/391 (3%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----CKSRKLDSTPFSTHMYKIL 265
+++S G+ Y ++ Y + G + V F E C+ +D F M K
Sbjct: 150 RVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNC 209
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
C L + K++ KG P Y+ I + ++L EEL + ++ G
Sbjct: 210 CFDLVE--------KYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGC 261
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
D C V + L +VE M +V+ R + AV
Sbjct: 262 FPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVG 321
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++E+++ +G P V ++I C+ +A ++ M V Y+++++ +
Sbjct: 322 LWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFW 381
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+ G I A V+ M+ GCEP+V YN L++ + + E L ++ME V PD+
Sbjct: 382 RAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRY 441
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
SY ++ +A + D F ++ GG D I++ F + ++ + L ++M
Sbjct: 442 SYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEM 501
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+G + D Y +N L G A+ L
Sbjct: 502 GYKGIQADAVTYGILINGLFGIGYSNLAEEL 532
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 101/475 (21%), Positives = 200/475 (42%), Gaps = 20/475 (4%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSED 142
++ F+ M+K+ +L YYN A F T I L QS + + + L D
Sbjct: 198 YNRFIGVMIKNC-CFDLVEKYYNMALA-KGFCLTPFTYSRWITALCQSNRIELVEELLTD 255
Query: 143 FKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHM 201
+ PD C+ V C R + + ++ + ++ + + +
Sbjct: 256 MDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRR 315
Query: 202 YYSTILVYEKMKSAGIVLDS-GCYCQIMEAYYKIGDSEKVAALFLECKSRKLD-STPFST 259
+ + ++E+M G+ D C I + + ++KV F E SR L +
Sbjct: 316 FSEAVGLWEEMVRRGLKPDVVACGALI----FGLCKNQKVDEAF-ELASRMLTLDIQLNV 370
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+Y L ++G +A K M+ G D Y L+ + SI AE L ++
Sbjct: 371 SIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRK 430
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVE-KTLDVVESMKNAKLKIS---DCISCAI-VNGF 374
E G+ +P+ +L+ +GL + LD + + +++ D +SC I ++ F
Sbjct: 431 MEMSGV--NPDRYSYNILL---KGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAF 485
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+ + +A+ +++++ +G VTY +IN I + AE++F +M V
Sbjct: 486 CRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNV 545
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
Y+ M+ K G + A + +M K P+ +N+L+ G++ + L+KE
Sbjct: 546 NVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKE 605
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
M + V PD +++ +IS + + + + NG ++DR ++ ++ V
Sbjct: 606 MRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMMENGIILDRDVSERLISVL 660
>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
Length = 665
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 159/391 (40%), Gaps = 13/391 (3%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-----CKSRKLDSTPFSTHMYKIL 265
+++S G+ Y ++ Y + G + V F E C+ +D F M K
Sbjct: 150 RVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNC 209
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
C L + K++ KG P Y+ I + ++L EEL + ++ G
Sbjct: 210 CFDLVE--------KYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGC 261
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
D C V + L +VE M +V+ R + AV
Sbjct: 262 FPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVG 321
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++E+++ +G P V ++I C+ +A ++ M V Y+++++ +
Sbjct: 322 LWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFW 381
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+ G I A V+ M+ GCEP+V YN L++ + + E L ++ME V PD+
Sbjct: 382 RAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRY 441
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
SY ++ +A + D F ++ GG D I++ F + ++ + L ++M
Sbjct: 442 SYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEM 501
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+G + D Y +N L G A+ L
Sbjct: 502 GYKGIQADAVTYGILINGLFGIGYSNLAEEL 532
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 101/475 (21%), Positives = 200/475 (42%), Gaps = 20/475 (4%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSED 142
++ F+ M+K+ +L YYN A F T I L QS + + + L D
Sbjct: 198 YNRFIGVMIKNC-CFDLVEKYYNMALA-KGFCLTPFTYSRWITALCQSNRIELVEELLTD 255
Query: 143 FKIYNVLPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHM 201
+ PD C+ V C R + + ++ + ++ + + +
Sbjct: 256 MDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRR 315
Query: 202 YYSTILVYEKMKSAGIVLDS-GCYCQIMEAYYKIGDSEKVAALFLECKSRKLD-STPFST 259
+ + ++E+M G+ D C I + + ++KV F E SR L +
Sbjct: 316 FSEAVGLWEEMVRRGLKPDVVACGALI----FGLCKNQKVDEAF-ELASRMLTLDIQLNV 370
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+Y L ++G +A K M+ G D Y L+ + SI AE L ++
Sbjct: 371 SIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRK 430
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVE-KTLDVVESMKNAKLKIS---DCISCAI-VNGF 374
E G+ +P+ +L+ +GL + LD + + +++ D +SC I ++ F
Sbjct: 431 MEMSGV--NPDRYSYNILL---KGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAF 485
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
+ + +A+ +++++ +G VTY +IN I + AE++F +M V
Sbjct: 486 CRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNV 545
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
Y+ M+ K G + A + +M K P+ +N+L+ G++ + L+KE
Sbjct: 546 NVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKE 605
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
M + V PD +++ +IS + + + + NG ++DR ++ ++ V
Sbjct: 606 MRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMMENGIILDRDVSERLISVL 660
>gi|2244996|emb|CAB10416.1| salt-inducible protein homolog [Arabidopsis thaliana]
gi|7268388|emb|CAB78681.1| salt-inducible protein homolog [Arabidopsis thaliana]
Length = 777
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 163/354 (46%), Gaps = 9/354 (2%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKF 281
Y M+ + K D EK LF E R K D+ F+T + ++G A+++
Sbjct: 253 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTT-----IISCARQNGVPKRAVEW 307
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
F M G D A++I ++ V +A L+ A + D L+ +Y
Sbjct: 308 FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGV 367
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G + L++ E MK +K + I +++ + + W A +Y+ LI+ G P T
Sbjct: 368 SGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWST 427
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
YA+++ AY R A ++ EM++KG V+ Y+++++M + +A + MK
Sbjct: 428 YAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRHVDEAFEIFQDMK 487
Query: 462 -AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ C+P+ W ++SL+ ++ + + + E ++ P T+VI Y +A++
Sbjct: 488 NCETCDPDSWTFSSLITVYACSGRVSKAEAALLQIREAGFEPTLFVLTSVIQCYGKAKQV 547
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
D V+ +++ G D G ++ V ++ + EE+ KL+ ++ KL +
Sbjct: 548 DDVVRTFDQVLELGITPDDRFCGCLLNVMTQ-TPSEEIGKLIGCVEKAKPKLGQ 600
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 116/253 (45%), Gaps = 38/253 (15%)
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+++E+MK ++ I ++ + F K + + K++++++ +G P T+ +II+
Sbjct: 239 NLLETMKPSREVILYNVTMKV---FRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCA 295
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG----------RIRDAMWLV-- 457
+ + +A + F +M G + V ++M+ YG+ G R R W +
Sbjct: 296 RQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDA 355
Query: 458 -----------------------AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+MKA G +PN+ IYN L+D GRAK Q + ++K+
Sbjct: 356 VTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKD 415
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
+ TP+ +Y ++ AY RAR D + Y E + G + + ++ + +
Sbjct: 416 LITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRH 475
Query: 555 IEELVKLLQDMKS 567
++E ++ QDMK+
Sbjct: 476 VDEAFEIFQDMKN 488
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 117/263 (44%), Gaps = 8/263 (3%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK--LDSTPFSTHMYKILC 266
+EKM S G D+ +++AY + G+ + +L+ ++ K +D+ FST L
Sbjct: 308 FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFST-----LI 362
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
G SG L + +MK G+ + IY LI S A+ ++K+ G
Sbjct: 363 RIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFT 422
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
+ LV Y + L + MK L ++ + +++ + R A ++
Sbjct: 423 PNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRHVDEAFEI 482
Query: 387 YEQLIS-QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++ + + + C P T++S+I Y SKAE +++++ GF+ + +S++ YG
Sbjct: 483 FQDMKNCETCDPDSWTFSSLITVYACSGRVSKAEAALLQIREAGFEPTLFVLTSVIQCYG 542
Query: 446 KTGRIRDAMWLVAKMKAKGCEPN 468
K ++ D + ++ G P+
Sbjct: 543 KAKQVDDVVRTFDQVLELGITPD 565
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 35/167 (20%)
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS---------------- 512
V +YN M + ++K+L + EKL+ EM R + PD ++TT+IS
Sbjct: 250 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 309
Query: 513 -------------------AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
AY RA DM + Y+ R ID ++ ++
Sbjct: 310 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 369
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
+ + + ++MK+ G K + +Y+ ++++ A QA+ + ++
Sbjct: 370 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 416
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 10/239 (4%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
++A Y+ A+ ++R + T LIR S +D +++ E+ K V P+ +R
Sbjct: 337 DMALSLYDRART-EKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 395
Query: 158 LVASCVRARKFKIANTLLQVFITDGEIALLAFNSAM-GGYNKLHMYYSTILVYEKMKSAG 216
L+ S RA++ A + + IT+G + +A+ Y + + +Y +MK G
Sbjct: 396 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 455
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLE---CKSRKLDSTPFSTHMYKILCDSLGKSG 273
+ L Y ++ ++ +F + C++ DS FS+ + C SG
Sbjct: 456 LSLTVILYNTLLSMCADNRHVDEAFEIFQDMKNCETCDPDSWTFSSLITVYAC-----SG 510
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
R +A ++E G + S+I + +V F + E G+ D C
Sbjct: 511 RVSKAEAALLQIREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFC 569
>gi|225447241|ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Vitis vinifera]
Length = 1008
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 12/372 (3%)
Query: 221 SGCYCQIMEAYYKIGDSEKVAALFLECK--SRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
+ Y +++ Y K G + A +F E +D+ F+T +Y + G G EA
Sbjct: 345 TATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIY-----TCGSHGHLSEA 399
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+M+E+GI D Y + +A + A + +++ E G+ P+V ++
Sbjct: 400 ETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLF--PDVVTHRAVL 457
Query: 339 YI--EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
++ E +V + V+ MK +++++ D S +V G K++ +
Sbjct: 458 HVLCERNMVGEVETVIAEMKRSRVRV-DEHSIPVVIKMYVNEGLLDKAKIFLEEHLLEDE 516
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
T +II+AY L+++AE VFI + G K VV Y+ MV YGK A L
Sbjct: 517 LSSRTRVAIIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSL 576
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
M+ G PN YNSL+ M + + + EM++ P ++++ VI+ Y R
Sbjct: 577 FKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARGILAEMQKMGFKPQCLTFSAVIACYAR 636
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
V Y E G + + G ++ FS+ +EE + + M G ++ +
Sbjct: 637 LGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIV 696
Query: 577 YHSAMNALRDAG 588
S + A G
Sbjct: 697 LTSLIKAYSKVG 708
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/418 (19%), Positives = 175/418 (41%), Gaps = 41/418 (9%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N+ + Y K V+ +M G+ +D+ + ++ G + L E +
Sbjct: 348 YNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAETLLTEME 407
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
R + +P T Y I G ALK +R ++E G+ D + +++
Sbjct: 408 ERGI--SP-DTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCERN 464
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
V E + E + + D ++ MY+ EGL++K + + ++S
Sbjct: 465 MVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKA-KIFLEEHLLEDELSSRTRV 523
Query: 369 AIVNGFSKRRGYWA------------------------------------AVKVYEQLIS 392
AI++ ++++ G WA A +++ + +
Sbjct: 524 AIIDAYAEK-GLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLFKGMRN 582
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
G P + TY S+I + L +A + EMQ+ GF + +S+++A Y + GR+ D
Sbjct: 583 HGTWPNESTYNSLIQMFSGGDLVDEARGILAEMQKMGFKPQCLTFSAVIACYARLGRLPD 642
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A+ + +M G +PN +Y SL++ N+ + +++M+ ++ +++ T++I
Sbjct: 643 AVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIK 702
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
AY++ + Y + G D + M+ +++ L + E + D++ +G+
Sbjct: 703 AYSKVGCLEGAKTLYEGMKDLEGGPDIVASNSMINLYADLGLVSEAKLIFDDLRQKGS 760
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 140/329 (42%), Gaps = 1/329 (0%)
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
+ D+ + G EA F ++ G +D Y ++ ++ A LFK G
Sbjct: 525 IIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLFKGMRNHG 584
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ L+ M+ LV++ ++ M+ K A++ +++ AV
Sbjct: 585 TWPNESTYNSLIQMFSGGDLVDEARGILAEMQKMGFKPQCLTFSAVIACYARLGRLPDAV 644
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
VYE+++ G P +V Y S+IN + +A F +M + G + +S++ Y
Sbjct: 645 GVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIKAY 704
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K G + A L MK P++ NS+++++ + + + ++ ++ R+K + D
Sbjct: 705 SKVGCLEGAKTLYEGMKDLEGGPDIVASNSMINLYADLGLVSEAKLIFDDL-RQKGSADG 763
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
VS+ T++ Y D + +E + +G + D A ++ ++ Q+ +LL +
Sbjct: 764 VSFATMMYLYKNLGMLDEAIDVADEMKQSGLLRDCASFNKVMACYATNGQLSACGELLHE 823
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQA 593
M S D + L+ GL +A
Sbjct: 824 MISRRILPDTGTFKVMFTVLKKGGLPTEA 852
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 188/441 (42%), Gaps = 48/441 (10%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
++++ ++K +D SL + + + P+ T + L+ A +L
Sbjct: 559 VMVKAYGKAKLYDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARGILAEMQKM 618
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G + L F++ + Y +L + VYE+M G+ + Y ++ + + G+ E+
Sbjct: 619 GFKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEA 678
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE--KGILEDPSIYA 298
C RK+D F +I+ SL K+ L+ + + E K + P I A
Sbjct: 679 L-----CYFRKMDE--FGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIVA 731
Query: 299 S--LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
S +I +A + V A+ +F + +KG D ++ +Y G++++ +DV + MK
Sbjct: 732 SNSMINLYADLGLVSEAKLIFDDLRQKGSA-DGVSFATMMYLYKNLGMLDEAIDVADEMK 790
Query: 357 NAKLKISDCIS------CAIVNG------------FSKR-RGYWAAVKVYEQLISQGCIP 397
+ L + DC S C NG S+R KV ++ +G +P
Sbjct: 791 QSGL-LRDCASFNKVMACYATNGQLSACGELLHEMISRRILPDTGTFKVMFTVLKKGGLP 849
Query: 398 GQVT---------------YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
+ A I + + + L++ A + D Y+ +
Sbjct: 850 TEAVTQLESSYQEGKPYARQAVITSVFSTVGLHAFALESCETFLNAEVDLDSSFYNVAIY 909
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
YG +G I A+ + KM+ +G EP++ Y +L +G+A L +++++ +++ R++ P
Sbjct: 910 AYGASGSIDKALKMFMKMQDEGLEPDLVTYINLAGCYGKAGMLEGLKRIYSQLKYREIEP 969
Query: 503 DKVSYTTVISAYNRAREFDMC 523
++ + +I AY A+ D+
Sbjct: 970 NESLFKAIIDAYRSAKRHDLA 990
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 133/311 (42%), Gaps = 7/311 (2%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y ++ + GK+ +A F+ M+ G + S Y SLI F+ V A + E +
Sbjct: 557 YNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARGILAEMQ 616
Query: 322 EKGMLRDPEVCLK---LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
+ G P+ CL ++ Y G + + V E M +K ++ + +++NGFS+
Sbjct: 617 KMGF--KPQ-CLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETG 673
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A+ + ++ G Q+ S+I AY ++ A+ ++ M+ +VA +
Sbjct: 674 NVEEALCYFRKMDEFGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIVASN 733
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
SM+ +Y G + +A + ++ KG V + ++M ++ L + + EM++
Sbjct: 734 SMINLYADLGLVSEAKLIFDDLRQKGSADGV-SFATMMYLYKNLGMLDEAIDVADEMKQS 792
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ D S+ V++ Y + C + +E + D +M V K E
Sbjct: 793 GLLRDCASFNKVMACYATNGQLSACGELLHEMISRRILPDTGTFKVMFTVLKKGGLPTEA 852
Query: 559 VKLLQDMKSEG 569
V L+ EG
Sbjct: 853 VTQLESSYQEG 863
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%)
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ Y++++ +YGK GR++DA + A+M G + +N+++ G +L + E L
Sbjct: 343 RLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAETL 402
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
EME R ++PD +Y +S Y D +K Y + R G D ++ V +
Sbjct: 403 LTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCE 462
Query: 552 LSQIEELVKLLQDMKSEGTKLDE 574
+ + E+ ++ +MK ++DE
Sbjct: 463 RNMVGEVETVIAEMKRSRVRVDE 485
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 128/294 (43%), Gaps = 4/294 (1%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y +++AY K +K +LF K + T + Y L EA
Sbjct: 557 YNVMVKAYGKAKLYDKAFSLF---KGMRNHGTWPNESTYNSLIQMFSGGDLVDEARGILA 613
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+M++ G ++++I +A + + A +++E G+ + V L+ + E G
Sbjct: 614 EMQKMGFKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETG 673
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
VE+ L M + + + +++ +SK A +YE + P V
Sbjct: 674 NVEEALCYFRKMDEFGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIVASN 733
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
S+IN Y + L S+A+ +F +++QKG V++++M+ +Y G + +A+ + +MK
Sbjct: 734 SMINLYADLGLVSEAKLIFDDLRQKGSADG-VSFATMMYLYKNLGMLDEAIDVADEMKQS 792
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
G + +N +M + L +L EM R++ PD ++ + + +
Sbjct: 793 GLLRDCASFNKVMACYATNGQLSACGELLHEMISRRILPDTGTFKVMFTVLKKG 846
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 133/311 (42%), Gaps = 8/311 (2%)
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ S + Y+K+ +YE MK D ++ Y +G + +F +
Sbjct: 695 IVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIVASNSMINLYADLGLVSEAKLIFDD 754
Query: 247 CKSR-KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ + D F+T MY L +LG EA+ +MK+ G+L D + + ++ +A
Sbjct: 755 LRQKGSADGVSFATMMY--LYKNLGMLD---EAIDVADEMKQSGLLRDCASFNKVMACYA 809
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ ++ EL E + +L D + + + GL + + +ES +
Sbjct: 810 TNGQLSACGELLHEMISRRILPDTGTFKVMFTVLKKGGLPTEAVTQLESSYQEGKPYAR- 868
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
I + FS + A++ E ++ Y I AY KA K+F++M
Sbjct: 869 -QAVITSVFSTVGLHAFALESCETFLNAEVDLDSSFYNVAIYAYGASGSIDKALKMFMKM 927
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
Q +G + +V Y ++ YGK G + + +++K + EPN ++ +++D + AK
Sbjct: 928 QDEGLEPDLVTYINLAGCYGKAGMLEGLKRIYSQLKYREIEPNESLFKAIIDAYRSAKRH 987
Query: 486 RQVEKLWKEME 496
E + +EM+
Sbjct: 988 DLAELVSQEMK 998
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 39/192 (20%)
Query: 343 GLVEKTLDVVESMKNAKLKISDC--ISCAIVNGFSKRRGYWAAV-KVYEQLISQ-GCIPG 398
G++ L +ES N + +S C +S K + W V +V+E + SQ +P
Sbjct: 124 GVLPSILRALESENNIEDTLSSCGKLSPKEQTVILKEQSSWERVLRVFEWIKSQEDYVPN 183
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+ Y ++ R + + +IEM + G Y +V +YGK G +++A+
Sbjct: 184 VIHYNVVLRVLGRAQKWDELRLCWIEMAKNGVLPTNNTYGMLVDVYGKAGLVKEAL---- 239
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+WI K M+ R V PD+V+ TV+ A
Sbjct: 240 ----------LWI---------------------KHMKLRGVFPDEVAMNTVVRVLKDAG 268
Query: 519 EFDMCVKFYNEF 530
EFD +FY ++
Sbjct: 269 EFDWADRFYRDW 280
>gi|255661186|gb|ACU25762.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 426
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 161/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + +A + D + + R +G ID+ + M+ + K +
Sbjct: 250 IEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++KS D +A++ L AG +A ++
Sbjct: 310 RLLHELKSP----DNIPRDTAIHILAGAGRIEEATYV 342
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 147/314 (46%), Gaps = 6/314 (1%)
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+E+ + D Y++LI F A ++ E+ + D + L+ + +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
K + + +K + A++N F K + + A + ++ + G +P +Y ++
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTL 120
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS---MVAMYGKTGRIRDAMWLVAKMKA 462
+ Y + +A VF EM++ KC++ ++ M+ +YG+ G ++A L M+
Sbjct: 121 LTMYVENKKFLEALSVFSEMREI---KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 177
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
G EPNV YN+L+ ++G A+ + L++ M+R+ + + V+Y +++ Y + E +
Sbjct: 178 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEK 237
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
E + G + ++ ++ K +++ L Q ++S G ++D+ LY + +
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIV 297
Query: 583 ALRDAGLQMQAQWL 596
A AGL A+ L
Sbjct: 298 AYEKAGLVAHAKRL 311
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 168/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F+ + Y + +
Sbjct: 33 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKRSGFTPDLVAYNAMIN 87
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +M+ G++ + + Y +L+ + + A +F E E L
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENKKFLEALSVFSEMREIKCLL 147
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 148 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 207
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 208 RLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKA 267
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + +Y +++ + +A + ++L E++ +PD +
Sbjct: 268 GKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELK----SPDNIPR 323
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ +FSK + +V++ M+
Sbjct: 324 DTAIHILAGAGRIEEATYVFRQAIDAGEVRDITVFERMIHLFSKYKKYANVVEVFDKMRG 383
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 384 LGYFPDSNVIALVLNA 399
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 164/353 (46%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG++ ++ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENKKFLEALSVFS 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K ++++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY + L + A+++
Sbjct: 254 SITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+ K D + + + + GRI +A ++ + G ++ ++ ++ + + K
Sbjct: 314 EL--KSPDN--IPRDTAIHILAGAGRIEEATYVFRQAIDAGEVRDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + EFD Y E + G V
Sbjct: 370 KYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVGCV 422
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 143/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTASYTTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ IV + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK+G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKAGKLDRAAMLFQKLRSSGVEID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYEKAGLVAHAKRLLHE------LKSPDNIPRDTAIHILAGAGRIEEATYV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A ++NAY +
Sbjct: 343 FRQAIDAGEVRDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANGVYMEMQEVG 420
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 136/282 (48%), Gaps = 7/282 (2%)
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK-GILEDPSIYASLICSFASITEVKL 312
S P S Y + L +SGR +ALK F M ++ G L D ++ + S + +
Sbjct: 106 SVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDA 165
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIV 371
A L +A + G +P L+ + I G + + + ES L D S ++
Sbjct: 166 AVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVI 225
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
G + + A+++ E++ GC P +T+ +++ CR ++ + +Q+ G
Sbjct: 226 KGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGV- 284
Query: 432 KC---VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
C VV Y+S+++ Y K GR+ DA+ + M G PN YN L++ +G+A ++
Sbjct: 285 -CMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESA 343
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
++++++ R+ PD V+++++I Y R + D ++ + E
Sbjct: 344 VRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEM 385
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 115/255 (45%), Gaps = 2/255 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ ++ + + G +AL+ M E G D + L+ +V +L + +
Sbjct: 221 FNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQ 280
Query: 322 EKGMLRDPEVCLKLVLM-YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
G+ V V+ Y + G +E L V M + + + ++NG+ K
Sbjct: 281 RDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDM 340
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
+AV++Y QLI + C P VT++S+I+ YCR A +++ EM Q V +S +
Sbjct: 341 ESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSII 400
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKG-CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
+ K R +A+ + ++ + P +IYN ++D+ + + + + +ME +
Sbjct: 401 IHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKG 460
Query: 500 VTPDKVSYTTVISAY 514
PDK +YT +I +
Sbjct: 461 CHPDKYTYTILIIGH 475
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/323 (18%), Positives = 135/323 (41%), Gaps = 24/323 (7%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
+ P+ + ++I+ + + + + L E + PD T + LV RA++ +
Sbjct: 214 YSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGH 273
Query: 173 TLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
LL+ DG ++ + S + GY K + VY M +G ++ Y ++
Sbjct: 274 DLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLING 333
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y K D E ++ + R+ P + L D + G+ +A++ +++M + I
Sbjct: 334 YGKALDMESAVRMYRQLILRR---CPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHI 390
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD--------PEVCL--KLVLMYI 340
P++Y +F+ I + + AE G LR+ P+ + ++ +
Sbjct: 391 --QPNVY-----TFSIIIHSLCKQN--RSAEALGFLRELNMRADIAPQTFIYNPVIDILC 441
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ G VE+ +V M+ ++ G + A+ ++ +++ GC P ++
Sbjct: 442 KGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKI 501
Query: 401 TYASIINAYCRIALYSKAEKVFI 423
T S I+ + + ++ +++ +
Sbjct: 502 TVNSFISCVLKAGMPNEVDQIML 524
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 95/222 (42%), Gaps = 1/222 (0%)
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
K+GR +AL + DM E G + Y LI + +++ A ++++ + D
Sbjct: 301 KAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVV 360
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
L+ Y G ++ + + + M ++ + I++ K+ A+ +L
Sbjct: 361 TFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLREL 420
Query: 391 ISQGCI-PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ I P Y +I+ C+ +A + +M++KG Y+ ++ + GR
Sbjct: 421 NMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGR 480
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
I +A+ L KM GC P+ NS + +A +V+++
Sbjct: 481 IPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMPNEVDQI 522
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 91/204 (44%), Gaps = 3/204 (1%)
Query: 383 AVKVYEQLISQ-GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+K+++Q+ Q G +P V ++ + + L A + + Q G AY++++
Sbjct: 130 ALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLL 189
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGC-EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ GR +DA+ L G P+ W +N ++ R N ++ +L + M
Sbjct: 190 NLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGC 249
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELV 559
+PD +++ ++ RA++ + + +G + + ++ + K ++E+ +
Sbjct: 250 SPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAL 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNA 583
+ DM GT+ + Y+ +N
Sbjct: 310 SVYNDMLESGTRPNTVTYNVLING 333
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 186/452 (41%), Gaps = 80/452 (17%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+L+ L ++ D + ED K + +PDA+T + L+ +A + + ++
Sbjct: 226 MLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSK 285
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G + L+AFN+ + K M I V KM + Y ++ G ++
Sbjct: 286 GCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRL 345
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFF-----------RD----- 284
+ C SR ++ + +Y L SL KSG A EA F RD
Sbjct: 346 NEVLDIC-SRFMNRS-----IYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSM 399
Query: 285 -------------------MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
M EKGI+ D +Y + + + +V LF + + G+
Sbjct: 400 LEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGI 459
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ D ++ Y GLV+K A +
Sbjct: 460 IPDVFTYNIMISSYGRVGLVDK-----------------------------------ASE 484
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++E + + C P VTY S+IN + +A +F EMQ+KG+D V YS ++ +G
Sbjct: 485 LFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFG 544
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K+ ++ A L +M ++GC PN+ YN L+D R + KL++ M+++ + PD +
Sbjct: 545 KSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSI 604
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
+Y+ + +R++ V+ R++G V+
Sbjct: 605 TYSILERLESRSQR---TVRIRKPTRISGWVV 633
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 171/402 (42%), Gaps = 35/402 (8%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VYE+M+ G LD Y +++A K G ++ +F + K + ++ Y IL
Sbjct: 208 VYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYT---YTILIR 264
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV-KLAEELFKEAEEKGML 326
GK+GR + L FF +M KG + + + ++I + V K+ L K E
Sbjct: 265 MSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQP 324
Query: 327 RDPEVCLKLVLMYIEEGL--VEKTLDVVESMKN----AKLKISDCIS----------CAI 370
+ L ++ E L + + LD+ N + L S C S C +
Sbjct: 325 NQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRM 384
Query: 371 VNGFSK--RRGYWA-------------AVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
N K R + + A+ + + +G + Y + +A ++
Sbjct: 385 WNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQV 444
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
S +F +M+ G V Y+ M++ YG+ G + A L M+A C+P+V YNSL
Sbjct: 445 SFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSL 504
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
++ G+ +L + L+KEM+ + PD +Y+ +I + ++ + +M ++E G
Sbjct: 505 INCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGC 564
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ I++ + + EE KL + MK +G D Y
Sbjct: 565 TPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITY 606
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/412 (19%), Positives = 152/412 (36%), Gaps = 67/412 (16%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
S + YK + + +S + + + +M+ KG D Y L+ + A V A ++
Sbjct: 184 LSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQV 243
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F++ ++K + D L+ M + G K L + M + ++ I+ K
Sbjct: 244 FEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGK 303
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVT--------------------------------YAS 404
+ + V +++ C P Q T Y+
Sbjct: 304 NKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSY 363
Query: 405 IINAYCRIALYSKAEKVFIEM-----------------------------------QQKG 429
++ + C+ S+A VF M +KG
Sbjct: 364 LVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKG 423
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
V Y+ + + GK ++ L KMK G P+V+ YN ++ +GR + +
Sbjct: 424 IVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKAS 483
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+L++ ME PD V+Y ++I+ + + D + E + G D I++ F
Sbjct: 484 ELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECF 543
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
K +++E L +M SEG + Y+ ++ L G +A L + +
Sbjct: 544 GKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMK 595
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 112/291 (38%), Gaps = 32/291 (10%)
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V K V E M+ K+ +++ +K A +V+E + + C+P TY
Sbjct: 202 VSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTI 261
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I + SK F EM KG ++A+++++ GK + +++++KM
Sbjct: 262 LIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVEND 321
Query: 465 CEPNVWIYNSLMDM---HGRAKNLRQVEKLWKEMERRKV--------------------- 500
C+PN + Y+ +D+ G+ L +V + R +
Sbjct: 322 CQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVF 381
Query: 501 --------TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
D+ ++ +++ A + + + G V D + ++ KL
Sbjct: 382 CRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKL 441
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
Q+ + L MK+ G D Y+ +++ GL +A L + E +
Sbjct: 442 KQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEAS 492
>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
Length = 526
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 175/396 (44%), Gaps = 49/396 (12%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
YE M S GI + +++ + K+G + +V A FL+ K L +Y I D+
Sbjct: 58 YEAMVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLH---LDKVIYNIAMDT 114
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
K+G EA+K +MK G+ D Y LI + E++ A+++F+E + + +
Sbjct: 115 YCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANI--E 172
Query: 329 PEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
P++ +L + + GLV + D+++ M + L+
Sbjct: 173 PDIVTYNILASGFCKSGLVMEVFDLLDRMADHGLE------------------------- 207
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
P +TY I +CR S+AE +F +++KG D V YSSMV Y
Sbjct: 208 ----------PNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLL 257
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
+G A L ++ +G + + + L++ R N++ + K M V PD +S
Sbjct: 258 SGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVIS 317
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y+ +IS Y + + D ++++ G ID + I++ + K +++E +L M
Sbjct: 318 YSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMT 377
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+ G K D Y L D L+ + LQQ +EG
Sbjct: 378 NLGIKPDVIAY----TVLLDGHLK---ETLQQGWEG 406
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 125/536 (23%), Positives = 222/536 (41%), Gaps = 42/536 (7%)
Query: 88 HGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI--RYLVQSK-KWDSIVSLSEDFK 144
+ M+ D +E+ D EA+KL E + + + + YL+QS K +++ + ++
Sbjct: 3 YNMVMDGLCKEMRLD---EAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYE 59
Query: 145 I---YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL----LAFNSAMGGYN 197
+ + + H S L+ C R K + + ++ F+ + L + +N AM Y
Sbjct: 60 AMVSHGIETNCHIVSYLL-QCFR--KLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYC 116
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
K + + +MK G+ D Y ++ Y G+ + +F E ++
Sbjct: 117 KNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIV 176
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ Y IL KSG E M + G+ + Y I F + AE LF
Sbjct: 177 T---YNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLF 233
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT-LDVVESMKNAKLKISDCISCA-IVNGFS 375
EEKG+ + +V Y+ G + + V + L D SC+ ++N
Sbjct: 234 NVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNL--VDHFSCSKLINDLC 291
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ A V + ++ +P ++Y+ +I+ YC+ KA F +M Q+G V+
Sbjct: 292 RVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVI 351
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH----------GRAKNL 485
Y+ ++ Y K GR+++A L +M G +P+V Y L+D H G AK
Sbjct: 352 VYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKER 411
Query: 486 RQV------EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
R KL M+ ++ PD YT +I +A + ++E G D
Sbjct: 412 RSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDA 471
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN--ALRDAGLQMQA 593
++ + +I + LLQ+M +G + DE L S +N +LR +Q A
Sbjct: 472 YAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDE-LTFSVLNQSSLRSRKIQFCA 526
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 195/451 (43%), Gaps = 46/451 (10%)
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
E F S + Y + E+MKS G+ L Y ++ + KI DS+
Sbjct: 274 EPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADN 333
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
LF E K+ KL S + +Y + + +SG A + R+M+E GI +Y S++
Sbjct: 334 LFKEAKT-KLSS--LNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMH 390
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEV----CLKLVLMYIEEGLVEKTLDVVESMKNA 358
+ I +F+ +E G P + CL + +Y++ G V K L + + M++
Sbjct: 391 GYTIIQNENKCLVVFERLKECGF--KPSIISYGCL--LNLYVKIGKVAKALSISKEMESC 446
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+K ++ ++NGF + A ++E+++ G P + Y +I A+C++ +A
Sbjct: 447 GIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRA 506
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+ +MQ++ A+ ++ Y G ++ A+ + M+ GC P V YN+L+
Sbjct: 507 ICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHG 566
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG---- 534
R +++ + +M +TP++ +YT ++ Y + + +++ + + +G
Sbjct: 567 LVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLD 626
Query: 535 --------------GVIDRAIA-----------------GIMVGVFSKLSQIEELVKLLQ 563
G + A+A I++ +++ + E L++
Sbjct: 627 VYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMK 686
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
MK +G + Y S +NA AG +A+
Sbjct: 687 QMKEDGVPPNIHTYTSYINACCKAGDMQRAE 717
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 196/433 (45%), Gaps = 10/433 (2%)
Query: 156 SRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKS 214
S ++ + ++ + A L++ DG + + ++S M GY + ++V+E++K
Sbjct: 351 SNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKE 410
Query: 215 AGI---VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
G ++ GC ++ Y KIG K ++ E +S + + Y +L +
Sbjct: 411 CGFKPSIISYGC---LLNLYVKIGKVAKALSISKEMESCGIK---HNNKTYSMLINGFIH 464
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
A F +M G+ D +IY LI +F + + A + ++ +++ M
Sbjct: 465 LHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRA 524
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
++ Y G ++ LD ++ M+ + + A+++G ++ AV V +++
Sbjct: 525 FRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMS 584
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
G P + TY I+ Y KA + F ++++ G V Y +++ K+GR++
Sbjct: 585 IAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQ 644
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
A+ + +M + N +IYN L+D R ++ + E L K+M+ V P+ +YT+ I
Sbjct: 645 SALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYI 704
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+A +A + K E G + ++ ++++S + +K ++MK G K
Sbjct: 705 NACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLK 764
Query: 572 LDERLYHSAMNAL 584
DE YH + +L
Sbjct: 765 PDEASYHCLVTSL 777
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 156/362 (43%), Gaps = 11/362 (3%)
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFS----THMYKILCDSLGKSGRAFEALKFFRDMK 286
Y K GD A F ++R ++ F H Y + D G AL +MK
Sbjct: 252 YAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRG-------ALSCVEEMK 304
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
+G+ Y+ LI FA I + + A+ LFKEA+ K + + ++ + + G +E
Sbjct: 305 SEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNME 364
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ ++V M+ + + ++++G++ + + V+E+L G P ++Y ++
Sbjct: 365 RAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLL 424
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
N Y +I +KA + EM+ G YS ++ + +A + +M G +
Sbjct: 425 NLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQ 484
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+ IYN L++ + N+ + + ++M++ ++ P ++ +I Y A + +
Sbjct: 485 PDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDT 544
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ R +G V ++ + +++ V +L M G +E Y M
Sbjct: 545 LDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAA 604
Query: 587 AG 588
+G
Sbjct: 605 SG 606
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/455 (20%), Positives = 182/455 (40%), Gaps = 29/455 (6%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F+P + L+ V+ K +S+S++ + + + T S L+ + F A
Sbjct: 413 FKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAF 472
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + + G + +N + + K+ I + EKM+ + + + I+E Y
Sbjct: 473 AIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGY 532
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
GD + +AL R+ P + Y L L + + A+ M GI
Sbjct: 533 AVAGDMK--SALDTLDLMRRSGCVP-TVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGIT 589
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y ++ +A+ ++ A E F + +E G+ D + L+ + G ++ L V
Sbjct: 590 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 649
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
M K+ + I +++G+++R W A + +Q+ G P TY S INA C+
Sbjct: 650 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 709
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+AEKV EM G V Y++++ + + A+ +MK G +P+
Sbjct: 710 AGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEAS 769
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV------- 524
Y+ L+ + R + +YT +IS E D+ V
Sbjct: 770 YHCLV----------------TSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVH 813
Query: 525 --KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
++ ++ GG + A+ I ++ L + E
Sbjct: 814 WSRWLHKIERTGGALTEALQRIFPPDWNSLEFLGE 848
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 135/292 (46%)
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
+ +I +A + A F+ +G+ + V LV Y + L VE MK
Sbjct: 245 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 304
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ L+++ +++GF+K +A ++++ ++ + Y++II+A+C+
Sbjct: 305 SEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNME 364
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+AE++ EM++ G D + Y SM+ Y + + ++K G +P++ Y L+
Sbjct: 365 RAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLL 424
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+++ + + + + KEME + + +Y+ +I+ + +F + E +G
Sbjct: 425 NLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQ 484
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
DRAI +++ F K+ ++ + +L+ M+ E + R + + AG
Sbjct: 485 PDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAG 536
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/245 (17%), Positives = 98/245 (40%), Gaps = 39/245 (15%)
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
S+ + A V +E++ P + + +I Y + A F M+ +G +
Sbjct: 222 SRPDNWQAVVSAFERIPK----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNA 277
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE---------------------------- 466
++S+V Y +R A+ V +MK++G E
Sbjct: 278 FVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKE 337
Query: 467 -------PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
N IY++++ H ++ N+ + E+L +EME + Y +++ Y +
Sbjct: 338 AKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQN 397
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ C+ + + G G ++ ++ K+ ++ + + + ++M+S G K + + Y
Sbjct: 398 ENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSM 457
Query: 580 AMNAL 584
+N
Sbjct: 458 LINGF 462
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 109/503 (21%), Positives = 218/503 (43%), Gaps = 19/503 (3%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
A D +N ++ RP +K ++ LV++K + ++ L + +++ + + T +
Sbjct: 33 AIDSFN---RMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+ S R+ A ++ + G + ++ + + + G ++ ++++ S G
Sbjct: 90 LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST---PFSTHMYKILCDSLGKSG 273
I LD Y ++ KIG + L RK++ P MY + D L K
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLL-----RKIEGEICRP-DVVMYNTIIDGLCKDK 203
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
+A + +M EK + + Y SLI F + ++ A L E K + +P VC
Sbjct: 204 LVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNV--NPNVCT 261
Query: 334 --KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
LV +EG + + +V M + A+++G+ + A V+ +
Sbjct: 262 FNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMA 321
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
G +Y+ +I+ ++ + +A +F M+ + VVAYSS++ K+GRI
Sbjct: 322 QMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRIN 381
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
A+ V +M +G PNV Y SL+D ++ + + L K+++ + + + +Y ++
Sbjct: 382 SALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILV 441
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+ K + + M G +D IM+ K S +E + LL M+ +G
Sbjct: 442 DGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCV 501
Query: 572 LDERLYHSAMNALRDAGLQMQAQ 594
D Y + +NA + + +A+
Sbjct: 502 PDAIAYETIINAFFEKDMNDKAE 524
>gi|255661208|gb|ACU25773.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 164/338 (48%), Gaps = 6/338 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G +AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRR 378
+ G+ D ++ ++ + L + ++ M+ A + + D +S ++ + + +
Sbjct: 70 LKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGV-VPDTVSYSTLLTMYVENQ 128
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y+
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYN 188
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ +YG +A+ L M+ K E NV YN++M ++G+ + L +EM R
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNR 248
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ P+ ++Y+T+IS + + + D + + R +G ID + M+ + + +
Sbjct: 249 GIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHA 308
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D +A++ L AG +A W+
Sbjct: 309 KRLLHELK----RPDNIPRDTAIHILAGAGRIEEATWV 342
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 154/363 (42%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K GI D Y S+I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGIKPDLVAYNSMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-V 371
A L E E G++ D L+ MY+E + L V M+ K + D +C I +
Sbjct: 98 ARSLISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKC-LLDLTTCNIMI 156
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ + + A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y++M+ +YGKT A L+ +M +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ + M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIDLFSKYKKYPNVVEVFEKMRGLGYFSDSNVISLV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 106/212 (50%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G +P++ YNS++++ G+AK R+ L EM V PD VSY+T+++ Y
Sbjct: 67 FSRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKDIEQN 218
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 157/344 (45%), Gaps = 11/344 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+NS + + K ++ + +M+ AG+V D+ Y ++ Y + + ++F
Sbjct: 79 LVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G V Y ++I AY R L + A+++
Sbjct: 254 AITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ + + + + GRI +A W+ + G ++ ++ ++D+ + K
Sbjct: 314 ELKRPD----NIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
V +++++M D + V++AY + EFD Y
Sbjct: 370 KYPNVVEVFEKMRGLGYFSDSNVISLVLNAYGKLHEFDKANDMY 413
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 145/359 (40%), Gaps = 20/359 (5%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P+ +I ++K + SL + + V+PD + S L+ V +KF A
Sbjct: 76 KPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVENQKFLEA-- 133
Query: 174 LLQVFITDGEIA----LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
L VF EI L N + Y +L M ++ M+ GI + Y ++
Sbjct: 134 -LSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLR 192
Query: 230 AYYKIGDSE---KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
Y GD+E + LF + + ++ + Y + GK+ +A ++M
Sbjct: 193 VY---GDAELFGEAIHLFRLMQRKDIEQNVVT---YNTMMMIYGKTLEHEKANNLIQEMH 246
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
+GI + Y+++I + + ++ A LF++ G+ D + +++ Y GLV
Sbjct: 247 NRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVA 306
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
++ +K I + I+ G + A V+ Q I G + + +I
Sbjct: 307 HAKRLLHELKRPD-NIPRDTAIHILAGAGRIE---EATWVFRQAIDAGEVKDITVFERMI 362
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
+ + + Y +VF +M+ G+ S ++ YGK A + M+ +GC
Sbjct: 363 DLFSKYKKYPNVVEVFEKMRGLGYFSDSNVISLVLNAYGKLHEFDKANDMYMGMQDEGC 421
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 190/453 (41%), Gaps = 82/453 (18%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+L+ L ++ D + ED K + +PDA+T + L+ +A + + ++
Sbjct: 168 MLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSK 227
Query: 182 G-EIALLAFNSAMGGYNKLHMYYSTILVYEKMK---------SAGIVLD----------- 220
G + L+AFN+ + K M I V KM + I LD
Sbjct: 228 GCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRL 287
Query: 221 ------------SGCYCQIMEAYYKIGDSEKVAALFLECK----SRKLDSTPFSTHMYKI 264
Y ++++ K G + + +F C+ K D F + M ++
Sbjct: 288 NEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVF--CRMWNSHEKGDRDAFVS-MLEV 344
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
LC++ + EA+ M EKGI+ D +Y + + + +V LF + + G
Sbjct: 345 LCNA----EKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNG 400
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
++ D ++ Y GLV+K A
Sbjct: 401 IIPDVFTYNIMISSYGRVGLVDK-----------------------------------AS 425
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+++E + + C P VTY S+IN + +A +F EMQ+KG+D V YS ++ +
Sbjct: 426 ELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECF 485
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
GK+ ++ A L +M ++GC PN+ YN L+D R + KL++ M+++ + PD
Sbjct: 486 GKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDS 545
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
++Y+ + +R++ V+ R++G V+
Sbjct: 546 ITYSILERLESRSQR---TVRIRKPTRISGWVV 575
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 171/402 (42%), Gaps = 35/402 (8%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VYE+M+ G LD Y +++A K G ++ +F + K + ++ Y IL
Sbjct: 150 VYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYT---YTILIR 206
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV-KLAEELFKEAEEKGML 326
GK+GR + L FF +M KG + + + ++I + V K+ L K E
Sbjct: 207 MSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQP 266
Query: 327 RDPEVCLKLVLMYIEEGL--VEKTLDVVESMKN----AKLKISDCIS----------CAI 370
+ L ++ E L + + LD+ N + L S C S C +
Sbjct: 267 NQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRM 326
Query: 371 VNGFSK--RRGYWA-------------AVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
N K R + + A+ + + +G + Y + +A ++
Sbjct: 327 WNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQV 386
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
S +F +M+ G V Y+ M++ YG+ G + A L M+A C+P+V YNSL
Sbjct: 387 SFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSL 446
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
++ G+ +L + L+KEM+ + PD +Y+ +I + ++ + +M ++E G
Sbjct: 447 INCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGC 506
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ I++ + + EE KL + MK +G D Y
Sbjct: 507 TPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITY 548
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/412 (19%), Positives = 152/412 (36%), Gaps = 67/412 (16%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
S + YK + + +S + + + +M+ KG D Y L+ + A V A ++
Sbjct: 126 LSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQV 185
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F++ ++K + D L+ M + G K L + M + ++ I+ K
Sbjct: 186 FEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGK 245
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVT--------------------------------YAS 404
+ + V +++ C P Q T Y+
Sbjct: 246 NKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSY 305
Query: 405 IINAYCRIALYSKAEKVFIEM-----------------------------------QQKG 429
++ + C+ S+A VF M +KG
Sbjct: 306 LVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKG 365
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
V Y+ + + GK ++ L KMK G P+V+ YN ++ +GR + +
Sbjct: 366 IVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKAS 425
Query: 490 KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVF 549
+L++ ME PD V+Y ++I+ + + D + E + G D I++ F
Sbjct: 426 ELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECF 485
Query: 550 SKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
K +++E L +M SEG + Y+ ++ L G +A L + +
Sbjct: 486 GKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMK 537
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 112/291 (38%), Gaps = 32/291 (10%)
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V K V E M+ K+ +++ +K A +V+E + + C+P TY
Sbjct: 144 VSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTI 203
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I + SK F EM KG ++A+++++ GK + +++++KM
Sbjct: 204 LIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVEND 263
Query: 465 CEPNVWIYNSLMDM---HGRAKNLRQVEKLWKEMERRKV--------------------- 500
C+PN + Y+ +D+ G+ L +V + R +
Sbjct: 264 CQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVF 323
Query: 501 --------TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
D+ ++ +++ A + + + G V D + ++ KL
Sbjct: 324 CRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKL 383
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEGT 603
Q+ + L MK+ G D Y+ +++ GL +A L + E +
Sbjct: 384 KQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEAS 434
>gi|410110073|gb|AFV61116.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
virgata]
Length = 424
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 154/326 (47%), Gaps = 3/326 (0%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 2 GLFDEMRQRALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLI 58
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A +F + G D ++ ++ + L + ++ M+ A +
Sbjct: 59 ELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVM 118
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++ + + + + A+ V+ ++ C+ T +I+ Y ++ + +A+K+
Sbjct: 119 PNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M++ G + VV+Y++++ +YG +A+ L M+ K NV YNS+M ++G+
Sbjct: 179 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGK 238
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ +
Sbjct: 239 TLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVL 298
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKS 567
M + + + +LL ++KS
Sbjct: 299 YQTMXVAYERAGLVAHAKRLLHELKS 324
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 151/319 (47%), Gaps = 6/319 (1%)
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
F +M+++ + D Y++LI F A ++ E+ + D + L+ +
Sbjct: 3 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 62
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ K + + +K + A++N F K + + A + ++ + G +P
Sbjct: 63 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA 122
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS---MVAMYGKTGRIRDAMWLV 457
+Y++++ Y + +A VF EM++ KC++ ++ M+ +YG+ G ++A L
Sbjct: 123 SYSTLLTMYVENKKFLEALSVFSEMREI---KCLLDLTTCNIMIDVYGQLGMAKEADKLF 179
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
M+ G EPNV YN+L+ ++G A+ + L++ M+R+ + + V+Y +++ Y +
Sbjct: 180 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKT 239
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
E + E + G + ++ ++ K+ +++ L Q ++S G ++D+ LY
Sbjct: 240 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLY 299
Query: 578 HSAMNALRDAGLQMQAQWL 596
+ A AGL A+ L
Sbjct: 300 QTMXVAYERAGLVAHAKRL 318
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 168/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F+ + Y + +
Sbjct: 40 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKRSGFTPDLVAYNAMIN 94
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +M+ G++ + + Y++L+ + + A +F E E L
Sbjct: 95 VFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLL 154
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 155 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 214
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 215 RLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV 274
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + +Y ++ + RA + ++L E++ +PD +
Sbjct: 275 GKLDRAAMLFQKLRSSGVEIDQVLYQTMXVAYERAGLVAHAKRLLHELK----SPDNIPR 330
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ +FSK + ++++ M+
Sbjct: 331 DTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVIEVFDKMRG 390
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 391 LGYFPDSNVIALVLNA 406
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 161/348 (46%), Gaps = 11/348 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG++ ++ Y ++ Y + + ++F
Sbjct: 86 LVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFS 145
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 146 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 200
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K ++++ ++++Y + EK ++++ M+N ++ +
Sbjct: 201 YGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 260
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++ AY R L + A+++
Sbjct: 261 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMXVAYERAGLVAHAKRLLH 320
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+ K D + + + + GRI +A ++ + G ++ ++ ++ + + K
Sbjct: 321 EL--KSPDN--IPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYK 376
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
V +++ +M PD V++AY + EFD Y E +
Sbjct: 377 KYANVIEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQ 424
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 139/315 (44%), Gaps = 12/315 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 119 PNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ IV + Y +M Y K
Sbjct: 179 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGK 238
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 239 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 295
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++ ++ V A+ L E L+ P+ + ++I G +E+ V
Sbjct: 296 QVLYQTMXVAYERAGLVAHAKRLLHE------LKSPDNIPRDTAIHILAGAGRIEEATYV 349
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y ++V++++ G P A ++NAY +
Sbjct: 350 FRQAIDAGEVKDITVFERMIHLFSKYKKYANVIEVFDKMRGLGYFPDSNVIALVLNAYGK 409
Query: 412 IALYSKAEKVFIEMQ 426
+ + KA V++EMQ
Sbjct: 410 LHEFDKANGVYMEMQ 424
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 143/304 (47%), Gaps = 3/304 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ KMK + D Y +++ + GDS+ V ++ + K D + Y + D
Sbjct: 322 VFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIW---NAMKADGYNDNVVAYTAVID 378
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+L + GR FEAL+ F +MK+KGI+ + Y SLI F A ELFK + G
Sbjct: 379 ALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKP 438
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ + + Y + G K + E MK+ + A++ G +K A +V+
Sbjct: 439 NGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVF 498
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+L + G P +TY +I + + + +A K+F +M + V+A +S++ K
Sbjct: 499 HELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKA 558
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR +A + ++K EP YN+L+ GR +++V L +EM P+ ++Y
Sbjct: 559 GRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITY 618
Query: 508 TTVI 511
T++
Sbjct: 619 NTIL 622
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 187/425 (44%), Gaps = 18/425 (4%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
F + GG S + MK AGIVL++ Y ++ K G + ++ +
Sbjct: 163 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY---R 219
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+D S Y +L + GK L R+M+ G+ P++Y+ IC +
Sbjct: 220 VMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGV--KPNVYSYTIC-IRVLG 276
Query: 309 EVKLAEELFK---EAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKIS 363
+ K +E ++ + E +G P+V VL+ + + G + DV MK + K
Sbjct: 277 QAKRFDEAYRILAKMENEGC--KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 334
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+++ F + ++++ + + G V Y ++I+A C++ +A ++F
Sbjct: 335 RVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFD 394
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM+QKG +Y+S+++ + K R DA+ L M G +PN + + ++ +G++
Sbjct: 395 EMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSG 454
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ + ++ M+ + + PD V+ V+ ++ M + ++E + G D
Sbjct: 455 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 514
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA-----QWLQQ 598
+M+ SK S+ +E VK+ DM D +S ++ L AG +A Q +
Sbjct: 515 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM 574
Query: 599 NFEGT 603
N E T
Sbjct: 575 NLEPT 579
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/516 (21%), Positives = 209/516 (40%), Gaps = 18/516 (3%)
Query: 87 LHGMLKDPQTQELAYDYYN------------EAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
+HG + T L +YY E K P+ ++ L +S +
Sbjct: 433 IHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 492
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAM 193
+ + K V PD T + ++ C +A KF A + I + + +LA NS +
Sbjct: 493 MAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLI 552
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
K ++ ++K + G Y ++ + G ++V L E
Sbjct: 553 DTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH---S 609
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+ P + Y + D L K+G +AL M KG + D S Y ++I A
Sbjct: 610 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 669
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC-AIVN 372
+F + + K ++ D ++ +++ GL+++ L +++ +D SC +++
Sbjct: 670 FSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLME 728
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G K+ G +++ E + S G +I C+ +A ++ + + G
Sbjct: 729 GILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSL 788
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
Y+S++ I A L A+MK GC P+ + YN L+D G++ + ++ K+
Sbjct: 789 KTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQ 848
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+EM R+ V+Y T+IS ++R + + Y G G ++ K
Sbjct: 849 EEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKA 908
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+IE+ L +M G K + +Y+ +N R AG
Sbjct: 909 GRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 944
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 170/381 (44%), Gaps = 3/381 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY M G+V Y +M A+ K D E V L E ++ + +S Y I
Sbjct: 217 VYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYS---YTICIR 273
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
LG++ R EA + M+ +G D + LI + A+++F + ++
Sbjct: 274 VLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKP 333
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D + L+ + + G + +++ +MK + A+++ + + A++++
Sbjct: 334 DRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMF 393
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++ +G +P Q +Y S+I+ + + + A ++F M G + + YGK+
Sbjct: 394 DEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKS 453
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G A+ MK+KG P+V N+++ ++ L ++++ E++ V+PD ++Y
Sbjct: 454 GESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITY 513
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T +I ++A +FD VK + + N V D ++ K + +E ++ +K
Sbjct: 514 TMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKE 573
Query: 568 EGTKLDERLYHSAMNALRDAG 588
+ + Y++ + L G
Sbjct: 574 MNLEPTDGTYNTLLAGLGREG 594
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 186/447 (41%), Gaps = 14/447 (3%)
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
D VPD +S + + K + E A+ + + K++ P T L+ L +
Sbjct: 535 DMIENNCVPDVLAVNSLIDTLYKAGRGDE-AWRIFYQLKEM-NLEPTDGTYNTLLAGLGR 592
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLA 188
K ++ L E+ N P+ T + ++ + A +L T G I L +
Sbjct: 593 EGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSS 652
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK----VAALF 244
+N+ + G K Y ++ +MK ++ D C I+ ++ KIG ++ + F
Sbjct: 653 YNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYF 711
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
L+ S K D + + M IL K ++++F + GI D LI
Sbjct: 712 LQPGS-KTDRSSCHSLMEGIL-----KKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHL 765
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ A EL K+ + G+ + L+ ++E L++ + MK +
Sbjct: 766 CKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDE 825
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++ K +KV E++ +G VTY +II+ + +A ++
Sbjct: 826 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 885
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+ +GF Y ++ K GRI DA L +M GC+ N IYN L++ H A N
Sbjct: 886 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 945
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVI 511
+V L+++M + + PD SYT +I
Sbjct: 946 TEKVCHLFQDMVDQGINPDIKSYTIII 972
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 105/510 (20%), Positives = 218/510 (42%), Gaps = 22/510 (4%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VPD ++ L G+ K + +A ++E K + P+ T ++I+ ++ K+D
Sbjct: 472 VPDVVAGNAVLFGLAKSGRLG-MAKRVFHELKAM-GVSPDTITYTMMIKCCSKASKFDEA 529
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARK----FKIANTLLQVFI--TDGEIALLAFN 190
V + D N +PD + L+ + +A + ++I L ++ + TDG +N
Sbjct: 530 VKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDG-----TYN 584
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ + G + + + E+M + + Y I++ K G + ++
Sbjct: 585 TLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTK 644
Query: 251 KL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
D + ++T +Y ++ K R EA F MK K ++ D + +++ SF I
Sbjct: 645 GCIPDLSSYNTVIYGLV-----KEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIG 698
Query: 309 EVKLAEELFKEA-EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+K A + K+ + G D C L+ +++ +EK+++ E + ++ + + D
Sbjct: 699 LMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFL 758
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
C ++ K++ A ++ ++ S G Y S+I L AE +F EM++
Sbjct: 759 CPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKE 818
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G Y+ ++ GK+ RI + + + +M KG E YN+++ +++ L Q
Sbjct: 819 LGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQ 878
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
L+ + + +P +Y ++ +A + +NE G + I I++
Sbjct: 879 AIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLN 938
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
E++ L QDM +G D + Y
Sbjct: 939 GHRIAGNTEKVCHLFQDMVDQGINPDIKSY 968
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/337 (18%), Positives = 142/337 (42%), Gaps = 1/337 (0%)
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
K +K D P Y L D G +G + ++ + MK G ++ Y ++I + +
Sbjct: 325 KMKKSDQKPDRV-TYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQV 383
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
V A E+F E ++KG++ + L+ +++ L++ + M K +
Sbjct: 384 GRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTH 443
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+N + K A++ YE + S+G +P V +++ + A++VF E++
Sbjct: 444 VLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKA 503
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G + Y+ M+ K + +A+ + M C P+V NSL+D +A +
Sbjct: 504 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDE 563
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+++ +++ + P +Y T+++ R + + E + + ++
Sbjct: 564 AWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 623
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
K + + + +L M ++G D Y++ + L
Sbjct: 624 CLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 660
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 105/252 (41%)
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G V +V + M+ +K + AI G G +A + G + T
Sbjct: 138 HGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYT 197
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y ++ + +A +V+ M G V YS ++ +GK + +WL+ +M+
Sbjct: 198 YNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREME 257
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
A G +PNV+ Y + + G+AK + ++ +ME PD +++T +I A
Sbjct: 258 AHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRIS 317
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ + + + DR ++ F + ++++ MK++G + Y + +
Sbjct: 318 DAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVI 377
Query: 582 NALRDAGLQMQA 593
+AL G +A
Sbjct: 378 DALCQVGRVFEA 389
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 173/402 (43%), Gaps = 29/402 (7%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYST 205
+ ++PD T S +V++ A + A L+ + DG +A AFN +G +
Sbjct: 308 WKLVPDKFTYSTVVSALADAGRVDDAVALVHEMVVDGVVAAEAFNPVLGAMLRTGDVTGA 367
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
++ M+ G + Y ++ G ++ AA+ + + + + P Y +
Sbjct: 368 AKLFSFMQLKGCAPSAATYNVLLHGLLLCGRAK--AAMGVMRRMERAEVVP-GVMTYGAV 424
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
D L + GR +A K +M+ KG++ + +++ +I F + EV A ++ G+
Sbjct: 425 VDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGI 484
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF----SKRRGYW 381
P V L ++ +GL M A+L + I V S RGY+
Sbjct: 485 --KPNVVLYSAMI---DGLAR-----CGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYF 534
Query: 382 ------AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
A+ +E ++ GC P VTY+ +IN C + A V+ M +G +
Sbjct: 535 QIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTI 594
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKG-CEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
AY+SM+ + +G + + L M A+G P+V YN L+D RAK+L + L +
Sbjct: 595 AYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQ 654
Query: 495 MERRKVTPDKVSYTTV---ISAYNRAREF--DMCVKFYNEFR 531
M + PD V+ T I + +EF + V+ N R
Sbjct: 655 MLDQACDPDTVTCNTFLREIEVGQKGQEFLEGLVVRLCNRKR 696
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 162/386 (41%), Gaps = 25/386 (6%)
Query: 167 KFKIANTLLQVFITDG-------EIALLAFN--------SAMGGYNKLHMYYSTILVYEK 211
+F + LL F + LL+FN S + ++L++ + +V+
Sbjct: 245 RFPLPPHLLPAFFSHSLRRFTRLAPTLLSFNLLLKCVCSSLVPRNHQLYLELALRVVHRS 304
Query: 212 MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
+ + +V D Y ++ A G + AL E +D + + + ++ +
Sbjct: 305 IPAWKLVPDKFTYSTVVSALADAGRVDDAVALVHE---MVVDGV-VAAEAFNPVLGAMLR 360
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+G A K F M+ KG + Y L+ K A + + E ++
Sbjct: 361 TGDVTGAAKLFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMT 420
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
+V + G +E V+E M++ L ++ + ++ GF K A +V++ ++
Sbjct: 421 YGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMV 480
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+ G P V Y+++I+ R ++AE +F EM + ++ YSSMV Y + G
Sbjct: 481 AAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSS 540
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMH---GRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
A+ M GC PN Y+ L++ GR+K+ V WK M R PD ++YT
Sbjct: 541 QALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMV---WKHMLGRGCVPDTIAYT 597
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNG 534
++I + + D ++ + + G
Sbjct: 598 SMIKGFCVSGMVDAGLRLFYDMLARG 623
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 101/215 (46%), Gaps = 5/215 (2%)
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
AA+ V ++ +PG +TY ++++ R A KV EM+ KG +S ++
Sbjct: 401 AAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVI 460
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ K G + A + M A G +PNV +Y++++D R + + E L++EM K
Sbjct: 461 TGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCV 520
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ ++Y++++ Y + + + F+ + G + +++ + + ++ + +
Sbjct: 521 PNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMV 580
Query: 562 LQDMKSEGTKLDERLYHS-----AMNALRDAGLQM 591
+ M G D Y S ++ + DAGL++
Sbjct: 581 WKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRL 615
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 13/217 (5%)
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
V+ + + +P + TY+++++A A + EM G VVA + + G
Sbjct: 301 VHRSIPAWKLVPDKFTYSTVVSALADAGRVDDAVALVHEMVVDG----VVAAEAFNPVLG 356
Query: 446 ---KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD---MHGRAKNLRQVEKLWKEMERRK 499
+TG + A L + M+ KGC P+ YN L+ + GRAK V + MER +
Sbjct: 357 AMLRTGDVTGAAKLFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGV---MRRMERAE 413
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
V P ++Y V+ R + K E R G V + + ++ F KL +++
Sbjct: 414 VVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRAS 473
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ M + G K + LY + ++ L G +A+ L
Sbjct: 474 RVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTEAELL 510
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 127/318 (39%), Gaps = 14/318 (4%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S H++ L +L +S R AL+ F + S ++L+ F L F
Sbjct: 201 SPHLFPHLIAALSRSPRPLLALRLFLRPPTSAAITHHSFNSALL-RFP--LPPHLLPAFF 257
Query: 318 KEAEEKGMLRDPEV-CLKLVLMYIEEGLV--------EKTLDVVE-SMKNAKLKISDCIS 367
+ + P + L+L + LV E L VV S+ KL
Sbjct: 258 SHSLRRFTRLAPTLLSFNLLLKCVCSSLVPRNHQLYLELALRVVHRSIPAWKLVPDKFTY 317
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+V+ + AV + +++ G + + + ++ A R + A K+F MQ
Sbjct: 318 STVVSALADAGRVDDAVALVHEMVVDGVVAAE-AFNPVLGAMLRTGDVTGAAKLFSFMQL 376
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
KG Y+ ++ GR + AM ++ +M+ P V Y +++D R L
Sbjct: 377 KGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLED 436
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
K+ +EM + + P++ ++ VI+ + + E D + ++ G + + M+
Sbjct: 437 ACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMID 496
Query: 548 VFSKLSQIEELVKLLQDM 565
++ ++ E L ++M
Sbjct: 497 GLARCGKMTEAELLFREM 514
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 193/448 (43%), Gaps = 22/448 (4%)
Query: 102 DYYNEAKKLPE--FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
D Y K++ E F P LI L+++ + + + + + + T + L+
Sbjct: 340 DAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 399
Query: 160 ASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKL-------HMYYSTILVYEKM 212
++ + IA LL+ E+ + FN G + + HM+ S + +M
Sbjct: 400 KGYCKSGQADIAERLLK------EMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEM 453
Query: 213 KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK-LDSTPFSTHMYKILCDSLGK 271
+ G ++ K G K L+L+ ++ L T S + LC++
Sbjct: 454 LLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEA--- 510
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
G+ E + +++ +G + D Y +LI ++ A E +KG+ D
Sbjct: 511 -GKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYT 569
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQL 390
L+ + VE+ + K + I D + ++ ++G K K+++++
Sbjct: 570 YSILIRGLLNMNKVEEAIQFWGDCKRNGM-IPDVYTYSVMIDGCCKAERTEEGQKLFDEM 628
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+S P V Y +I AYCR S A ++ +M+ KG Y+S++ R+
Sbjct: 629 MSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 688
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
+A L+ +M+ +G EPNV+ Y +L+D +G+ + +VE L +EM + V P+K++YT +
Sbjct: 689 EEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 748
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVID 538
I Y R + +E R G V D
Sbjct: 749 IGGYARDGNVTEASRLLHEMREKGIVPD 776
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/457 (19%), Positives = 196/457 (42%), Gaps = 7/457 (1%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTI 206
+ P TC+ L+ S VRA +F+ V + F +A+ + K I
Sbjct: 213 GMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCKGVSPDVYLFTTAINAFCKGGKVEEAI 272
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
++ KM+ AG+V + Y +++ G ++ + R ++ T + Y IL
Sbjct: 273 ELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLIT---YSILV 329
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
L K+ R +A ++M EKG + +Y +LI S + A E+ KG+
Sbjct: 330 KGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLS 389
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
L+ Y + G + +++ M + ++ +++ + +A++
Sbjct: 390 LTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRF 449
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG- 445
+++ + PG ++I+ C+ +SKA +++++ KGF V +S ++G
Sbjct: 450 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGF--LVDTKTSNALLHGL 507
Query: 446 -KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ G++ + + ++ +G + YN+L+ K L + EM ++ + PD
Sbjct: 508 CEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDN 567
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
+Y+ +I + + ++F+ + + NG + D +M+ K + EE KL +
Sbjct: 568 YTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDE 627
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
M S + + +Y+ + A +G A L+++ +
Sbjct: 628 MMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMK 664
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/473 (18%), Positives = 201/473 (42%), Gaps = 9/473 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIY--NVLPDAHTCSRLVASCVRARKFKIAN 172
P K+T +L+ LV++ ++ E F + V PD + + + + + K + A
Sbjct: 216 PSKTTCNILLTSLVRATEFQKCC---EAFHVVCKGVSPDVYLFTTAINAFCKGGKVEEAI 272
Query: 173 TLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L G + ++ +N+ + G Y + EKM G+ Y +++
Sbjct: 273 ELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGL 332
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K ++++ + K P + +Y L DSL ++G +A++ M KG+
Sbjct: 333 TK---AKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLS 389
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
S Y +LI + + +AE L KE G + ++ + + + L
Sbjct: 390 LTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRF 449
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
V M + + +++G K + AV+++ + +++G + T ++++ C
Sbjct: 450 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCE 509
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ ++ E+ +GF V+Y+++++ ++ +A + +M KG +P+ +
Sbjct: 510 AGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYT 569
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y+ L+ + + + W + +R + PD +Y+ +I +A + K ++E
Sbjct: 570 YSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMM 629
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
N + + ++G + + ++ ++L +DMK +G + Y S + +
Sbjct: 630 SNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 682
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 35/256 (13%)
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
+ Y IL L + EA++F+ D K G++ D Y+ +I + ++LF
Sbjct: 567 NYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFD 626
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E + + V L+ Y G + L++ E MK+
Sbjct: 627 EMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKH--------------------- 665
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+G P TY S+I I+ +A+ + EM+ +G + V Y+
Sbjct: 666 --------------KGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYT 711
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ YGK G++ L+ +M +K PN Y ++ + R N+ + +L EM +
Sbjct: 712 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREK 771
Query: 499 KVTPDKVSYTTVISAY 514
+ PD ++Y I Y
Sbjct: 772 GIVPDSITYKEFIYGY 787
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 149/350 (42%), Gaps = 11/350 (3%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S + ++ C + G + AL F + KG+ + L+ S TE + E F
Sbjct: 183 SDLLIEVYCTQFKRDG-CYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAF 241
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
KG+ D + + + + G VE+ +++ M+ A + + +++G
Sbjct: 242 -HVVCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMS 300
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
Y A E+++ +G P +TY+ ++ + A V EM +KGF V+ Y
Sbjct: 301 GRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVY 360
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++++ + G + A+ + M +KG YN+L+ + ++ E+L KEM
Sbjct: 361 NNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLS 420
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM-----NGGVIDRAIAGIMV-GVFSK 551
++ S+T+VI FD ++F E + GG++ I+G+ G SK
Sbjct: 421 IGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 480
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR-DAGLQMQAQWLQQNF 600
+E +K L TK L H A + + G ++Q + L + F
Sbjct: 481 --AVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGF 528
>gi|255661190|gb|ACU25764.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 426
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 162/337 (48%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALAWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS +++ + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWSKIGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D +A++ L +G +A W+
Sbjct: 310 RLLHELK----RPDNIPRDTAIHILAGSGRIEEATWV 342
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 152/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFSPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G++ + L+ MY+E + L V M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVMPNTVSYSTLLTMYVENKKFLEALTVFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+++G EPN Y++++ + + L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWSKIGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGSGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYSNVVEVFDKMRGLGYFPDSNVTALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 163/351 (46%), Gaps = 11/351 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG++ ++ Y ++ Y + + +F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLTMYVENKKFLEALTVFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M++ ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ +SK A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWSKIGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ + + + + +GRI +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPD----NIPRDTAIHILAGSGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
V +++ +M PD V++AY + EFD Y E + G
Sbjct: 370 KYSNVVEVFDKMRGLGYFPDSNVTALVLNAYGKLHEFDKANNVYIEMQDEG 420
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALAWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM V P+ VSY+T+++ Y
Sbjct: 67 FSRLKRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 139/318 (43%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + L+ V++KK+ +++ + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTVSYSTLLTMYVENKKFLEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E +SR ++ + Y + K G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQSRGIEPNSIT---YSTIISIWSKIGKLDRAAMLFQKLRSSGVEID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDTAIHILAGSGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A ++NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYSNVVEVFDKMRGLGYFPDSNVTALVLNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V+IEMQ +G
Sbjct: 403 LHEFDKANNVYIEMQDEG 420
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 196 YNKLHMYYSTILVYEK-------MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
YN + M Y L +EK M+S GI +S Y I+ + KIG ++ A LF + +
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWSKIGKLDRAAMLFQKLR 281
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE-KGILEDPSIYASLICSFASI 307
S ++ +Y+ + + ++G A + ++K I D +I+ A
Sbjct: 282 SSGVE---IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHI-----LAGS 333
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++ A +F++A + G ++D V +++ ++ + ++V + M+ ++
Sbjct: 334 GRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYSNVVEVFDKMRGLGYFPDSNVT 393
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
++N + K + A VY ++ +GC+
Sbjct: 394 ALVLNAYGKLHEFDKANNVYIEMQDEGCL 422
>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
Length = 540
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 110/501 (21%), Positives = 207/501 (41%), Gaps = 18/501 (3%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLP----DAHTC 155
AY+ E + L + + T ++++ L + K+ D +S ++V P D +
Sbjct: 23 AYELLKEMEALG-IKKSQVTHGIILKALCERKEVDQALSY-----FHSVSPRSDLDVVSY 76
Query: 156 SRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSA 215
+ L+ + + +A L + + G ++A+ + + K H I +E+M +
Sbjct: 77 TTLIMGLADSGRIDVACELFEEMSSSGSQCVVAYTAIINALFKAHRPDQAIACFERMVAR 136
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
D + ++ K G + +F E + +Y L D L K+
Sbjct: 137 KCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDII---VYTSLVDGLSKASMM 193
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
EA K +++ +G+ Y S I V EE K E G + EV +
Sbjct: 194 DEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRV---EEAGKLVREMGKMCAAEVLHCI 250
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
Y+ EG +E+ L + + M + + +++G R A +++E ++ QGC
Sbjct: 251 FGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGC 310
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
+P TY I++ +C+ A KV M G + Y+S++ + R R+A+
Sbjct: 311 VPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAIN 370
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM-ERRKVTPDKVSYTTVISAY 514
+ + M K +P++ YN LM + + +EM ER + P VSY T+I
Sbjct: 371 VYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGL 430
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+A D + + E NG V D ++ + +++E +LL+DM G D
Sbjct: 431 GKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDA 490
Query: 575 RLYHSAMNALRDAGLQMQAQW 595
Y++ + L G ++ W
Sbjct: 491 LAYNALVKVLC-GGAKVGPAW 510
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 152/356 (42%), Gaps = 38/356 (10%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y I+ L +GR A + ++M+ GI + + ++ + EV A F
Sbjct: 7 YNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYFHSVS 66
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC--AIVNGFSKRRG 379
+ L D L++ + G ++ ++ E M ++ S C+ AI+N K
Sbjct: 67 PRSDL-DVVSYTTLIMGLADSGRIDVACELFEEMSSSG---SQCVVAYTAIINALFKAHR 122
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
A+ +E+++++ C P T+ +I C+ ++A +VF EM +KG+ ++ Y+S
Sbjct: 123 PDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTS 182
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD---MHGR----AKNLRQVEK-- 490
+V K + +A L+ ++ ++G +P Y S + +GR K +R++ K
Sbjct: 183 LVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMC 242
Query: 491 -----------------------LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
L EM ++ VT D YT +I R D + +
Sbjct: 243 AAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMF 302
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
G V D G++V F K +++ K+++ M + G + + +Y+S M+
Sbjct: 303 EAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDG 358
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 4/238 (1%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
LI L ++ D + E +PD T +V+ + K + A ++++ G
Sbjct: 285 LIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAG 344
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
E +NS M G+ ++ I VY M + Y +M K+G +
Sbjct: 345 LEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADAR 404
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
+ E + R D + Y+ L LGK+GRA EA+ F +M + G++ D SLI
Sbjct: 405 LVLREMRER--DGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLI 462
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV-VESMKNA 358
+ A + A +L ++ G+ D LV + V DV VE M N+
Sbjct: 463 QALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNS 520
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/405 (18%), Positives = 165/405 (40%), Gaps = 20/405 (4%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + F + G+ K + A + + E + ++P+ L+ L ++ D
Sbjct: 140 PDLRTFTVVITGLCKAGKLNR-ACEVFQEMNR-KGWKPDIIVYTSLVDGLSKASMMDEAR 197
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGY 196
L ++ + P T + ++ + + + A L++ G++ A + GGY
Sbjct: 198 KLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREM---GKMCAAEVLHCIFGGY 254
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + ++M G+ LD CY ++ + + +++ +F E R+ P
Sbjct: 255 VLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMF-EAMVRQ-GCVP 312
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
T Y ++ K G+ A K M G+ + +Y SL+ F + + A +
Sbjct: 313 -DTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINV 371
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVE--KTLD---VVESMKNAKLKISDCISC-AI 370
+ K + P + +LM GL + +T D V+ M+ + +S +
Sbjct: 372 YSTMLRK--MVKPSIVTYNILML---GLCKLGQTADARLVLREMRERDGIVPTIVSYRTL 426
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++G K A+ V+ +++ G +P + S+I A +A ++ +M + G
Sbjct: 427 IHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGI 486
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+AY+++V + ++ A ++ +M C P+ + ++
Sbjct: 487 TPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAM 531
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 143/304 (47%), Gaps = 3/304 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ KMK + D Y +++ + GDS+ V ++ + K D + Y + D
Sbjct: 412 VFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIW---NAMKADGYNDNVVAYTAVID 468
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+L + GR FEAL+ F +MK+KGI+ + Y SLI F A ELFK + G
Sbjct: 469 ALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKP 528
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ + + Y + G K + E MK+ + A++ G +K A +V+
Sbjct: 529 NGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVF 588
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+L + G P +TY +I + + + +A K+F +M + V+A +S++ K
Sbjct: 589 HELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKA 648
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR +A + ++K EP YN+L+ GR +++V L +EM P+ ++Y
Sbjct: 649 GRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITY 708
Query: 508 TTVI 511
T++
Sbjct: 709 NTIL 712
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 119/529 (22%), Positives = 221/529 (41%), Gaps = 14/529 (2%)
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
D VPD +S + + K + E A+ + + K++ P T L+ L +
Sbjct: 625 DMIENNCVPDVLAVNSLIDTLYKAGRGDE-AWRIFYQLKEM-NLEPTDGTYNTLLAGLGR 682
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLA 188
K ++ L E+ N P+ T + ++ + A +L T G I L +
Sbjct: 683 EGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSS 742
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK----VAALF 244
+N+ + G K Y ++ +MK ++ D C I+ ++ KIG ++ + F
Sbjct: 743 YNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYF 801
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
L+ S K D + + M IL K ++++F + GI D LI
Sbjct: 802 LQPGS-KTDRSSCHSLMEGIL-----KKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHL 855
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ A EL K+ + G+ + L+ ++E L++ + MK +
Sbjct: 856 CKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDE 915
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++ K +KV E++ +G VTY +II+ + +A ++
Sbjct: 916 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 975
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+ +GF Y ++ K GRI DA L +M GC+ N IYN L++ H A N
Sbjct: 976 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 1035
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+V L+++M + + PD SYT +I +A + + + ++ + G D +
Sbjct: 1036 TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNL 1095
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
++ K ++EE V L +M+ +G + Y+S + L AG +A
Sbjct: 1096 LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEA 1144
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 187/425 (44%), Gaps = 18/425 (4%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
F + GG S + MK AGIVL++ Y ++ K G + ++ +
Sbjct: 253 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY---R 309
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+D S Y +L + GK L R+M+ G+ P++Y+ IC +
Sbjct: 310 VMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGV--KPNVYSYTIC-IRVLG 366
Query: 309 EVKLAEELFK---EAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKIS 363
+ K +E ++ + E +G P+V VL+ + + G + DV MK + K
Sbjct: 367 QAKRFDEAYRILAKMENEGC--KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 424
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+++ F + ++++ + + G V Y ++I+A C++ +A ++F
Sbjct: 425 RVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFD 484
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM+QKG +Y+S+++ + K R DA+ L M G +PN + + ++ +G++
Sbjct: 485 EMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSG 544
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
+ + ++ M+ + + PD V+ V+ ++ M + ++E + G D
Sbjct: 545 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 604
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA-----QWLQQ 598
+M+ SK S+ +E VK+ DM D +S ++ L AG +A Q +
Sbjct: 605 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM 664
Query: 599 NFEGT 603
N E T
Sbjct: 665 NLEPT 669
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 197/463 (42%), Gaps = 14/463 (3%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+PD +++ ++G++K+ + E A+ + + KK+ P+ +TL ++ V+
Sbjct: 737 IPDLSSYNTVIYGLVKEERYNE-AFSIFCQMKKV--LIPDYATLCTILPSFVKIGLMKEA 793
Query: 137 VSLSEDFKIY-NVLPDAHTCSRLVASCVR----ARKFKIANTLLQVFITDGEIALLAFNS 191
+ + +D+ + D +C L+ ++ + + A + IT + L
Sbjct: 794 LHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIK 853
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ K + + +K KS G+ L +G Y ++ + LF E K
Sbjct: 854 HLCKQKKALEAHELV---KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 910
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
F+ Y +L D++GKS R E LK +M KG Y ++I ++
Sbjct: 911 CGPDEFT---YNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLE 967
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A +L+ +G P L+ ++ G +E ++ M K + I ++
Sbjct: 968 QAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILL 1027
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
NG +++ ++ QG P +Y II+ C+ + F ++ + G +
Sbjct: 1028 NGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLE 1087
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
++ Y+ ++ GK+ R+ +A+ L +M+ KG PN++ YNSL+ G+A + K+
Sbjct: 1088 PDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKM 1147
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
++E+ + P+ +Y +I Y+ + D Y + G
Sbjct: 1148 YEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGG 1190
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 170/381 (44%), Gaps = 3/381 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY M G+V Y +M A+ K D E V L E ++ + +S Y I
Sbjct: 307 VYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYS---YTICIR 363
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
LG++ R EA + M+ +G D + LI + A+++F + ++
Sbjct: 364 VLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKP 423
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D + L+ + + G + +++ +MK + A+++ + + A++++
Sbjct: 424 DRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMF 483
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++ +G +P Q +Y S+I+ + + + A ++F M G + + YGK+
Sbjct: 484 DEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKS 543
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G A+ MK+KG P+V N+++ ++ L ++++ E++ V+PD ++Y
Sbjct: 544 GESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITY 603
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T +I ++A +FD VK + + N V D ++ K + +E ++ +K
Sbjct: 604 TMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKE 663
Query: 568 EGTKLDERLYHSAMNALRDAG 588
+ + Y++ + L G
Sbjct: 664 MNLEPTDGTYNTLLAGLGREG 684
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/337 (18%), Positives = 142/337 (42%), Gaps = 1/337 (0%)
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
K +K D P Y L D G +G + ++ + MK G ++ Y ++I + +
Sbjct: 415 KMKKSDQKPDRV-TYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQV 473
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
V A E+F E ++KG++ + L+ +++ L++ + M K +
Sbjct: 474 GRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTH 533
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+N + K A++ YE + S+G +P V +++ + A++VF E++
Sbjct: 534 VLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKA 593
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G + Y+ M+ K + +A+ + M C P+V NSL+D +A +
Sbjct: 594 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDE 653
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+++ +++ + P +Y T+++ R + + E + + ++
Sbjct: 654 AWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 713
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
K + + + +L M ++G D Y++ + L
Sbjct: 714 CLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 750
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 138/350 (39%), Gaps = 10/350 (2%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL----QVF 178
LI++L + KK L + FK + V + L+ V IA L ++
Sbjct: 851 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 910
Query: 179 ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE 238
E AMG ++ + V E+M G Y I+ K E
Sbjct: 911 CGPDEFTYNLLLDAMGKSMRIE---EMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLE 967
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
+ L+ S+ TP + Y L D L K+GR +A F +M E G + +IY
Sbjct: 968 QAIDLYYNLMSQGFSPTPCT---YGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYN 1024
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
L+ + LF++ ++G+ D + ++ + G + L +
Sbjct: 1025 ILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM 1084
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
L+ +++G K + AV ++ ++ +G +P TY S+I + ++A
Sbjct: 1085 GLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEA 1144
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
K++ E+ KG+ V Y++++ Y +G A +M GC PN
Sbjct: 1145 GKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 105/252 (41%)
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G V +V + M+ +K + AI G G +A + G + T
Sbjct: 228 HGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYT 287
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y ++ + +A +V+ M G V YS ++ +GK + +WL+ +M+
Sbjct: 288 YNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREME 347
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
A G +PNV+ Y + + G+AK + ++ +ME PD +++T +I A
Sbjct: 348 AHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRIS 407
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ + + + DR ++ F + ++++ MK++G + Y + +
Sbjct: 408 DAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVI 467
Query: 582 NALRDAGLQMQA 593
+AL G +A
Sbjct: 468 DALCQVGRVFEA 479
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 139/316 (43%), Gaps = 6/316 (1%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSED 142
++S + G++ D ++A + E K+L P++ T LL+ + +S + + ++ + E+
Sbjct: 883 YNSLICGLV-DENLIDIAEGLFAEMKEL-GCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE 940
Query: 143 FKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHM 201
T + +++ V++R+ + A L ++ G + + G K
Sbjct: 941 MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 1000
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
++ +M G + Y ++ + G++EKV LF + + ++ S
Sbjct: 1001 IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS--- 1057
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y I+ D+L K+G+ + L +FR + E G+ D Y LI ++ A LF E +
Sbjct: 1058 YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 1117
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+KG++ + L+L + G + + E + K + A++ G+S
Sbjct: 1118 KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTD 1177
Query: 382 AAVKVYEQLISQGCIP 397
+A Y ++I GC+P
Sbjct: 1178 SAYAAYGRMIVGGCLP 1193
>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 957
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 104/528 (19%), Positives = 213/528 (40%), Gaps = 58/528 (10%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ ++ + +++D+++ E + ++P AH ++ + +A + A L
Sbjct: 140 PDEVAGGCMLEAYARWERYDTLLEFYEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALML 199
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + + E + + + NK + ++ M++AG + D Y I+ A K
Sbjct: 200 WEDLLVEKLEPNFVLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGK 259
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G ++ AL+L+ K + + + F+ Y I+ + K+GR A + +M+ G + D
Sbjct: 260 LGRYQESEALYLDMKKQGIVPSKFT---YTIMINVWSKAGRFASAAETLAEMQRSGCIAD 316
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+Y S+I + + AE++FKE + G+L + + + E G + L + +
Sbjct: 317 EVVYCSIINMYGKAGLYEEAEKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFD 376
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M L + +++ F + A KVY ++ G VTY ++IN Y +
Sbjct: 377 VMAEKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAGS-ANVVTYGNMINLYSKFQ 435
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP------ 467
+ AE + EM++ G Y S V +Y + I A +V +MK G E
Sbjct: 436 MVEDAENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMKDDGLESVCNERE 495
Query: 468 ------------NVWIYNSLMDMHGRAKNLRQVE-------------------------- 489
+ I N L+ A LR+ E
Sbjct: 496 MFPLGQALQSPIDTQILNQLLIKRAEAGELREAELLLDKLVEAGGCIVDTAAVLMINLYG 555
Query: 490 ---------KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
L+ ++++ P Y T+I +E + + ++ NG + D
Sbjct: 556 RRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENGRMFDAV 615
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
I+V ++K + ++ L++ K G +D Y++++ A +G
Sbjct: 616 TVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSG 663
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 120/567 (21%), Positives = 228/567 (40%), Gaps = 99/567 (17%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
++I L + + + V +D + LPD + ++ + + +++ + L
Sbjct: 217 IIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLDMKKQ 276
Query: 182 GEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G + + + + ++K + S +M+ +G + D YC I+ Y K G E+
Sbjct: 277 GIVPSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKAGLYEEA 336
Query: 241 AALFLECKSRKLDSTPFS-THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
+F E + L S S T M K+ ++ GR EALK F M EKG+L + +
Sbjct: 337 EKIFKEMDTLGLLSHEKSYTSMAKVRAEA----GRHAEALKLFDVMAEKGLLTTRMTWNT 392
Query: 300 LICSFASITEVKLA----------------------------------EELFKEAEEKGM 325
L+ F I +V+ A E L E E G+
Sbjct: 393 LLHCFVRIGDVEQATKVYNDMVEAGSANVVTYGNMINLYSKFQMVEDAENLLAEMRESGV 452
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK--------------ISDCISCAIV 371
D + V +Y +++K VV+ MK+ L+ + I I+
Sbjct: 453 KPDEYIYGSFVKLYCNSDMIDKATMVVQEMKDDGLESVCNEREMFPLGQALQSPIDTQIL 512
Query: 372 NGFSKRRGYWAAVKVYEQLISQ-----GCIPGQVTYASI--INAYCRIALYSKAEKVFIE 424
N +R ++ E L+ + GCI V A++ IN Y R L+ KA+ +F
Sbjct: 513 NQLLIKRAEAGELREAELLLDKLVEAGGCI---VDTAAVLMINLYGRRGLFQKAKSLFNS 569
Query: 425 MQQKGFDKCVVAYSSMVAM-----------------------------------YGKTGR 449
+Q+K + Y++M+ + Y K GR
Sbjct: 570 LQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENGRMFDAVTVSILVHAYTKEGR 629
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+DA L+ + K G + YN+ + + ++ NL+ +++ EM+ + P +YT
Sbjct: 630 FKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTI 689
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+IS +++ + V+ + + D M+ + + +E L Q+M+++G
Sbjct: 690 LISLFSKLGDLGRAVQAFEVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKG 749
Query: 570 TKLDERLYHSAMNALRDAGLQMQAQWL 596
K +E +Y++ ++A AGL +A+ L
Sbjct: 750 FKPNEVIYNNLLDAFARAGLFAEARLL 776
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 180/400 (45%), Gaps = 7/400 (1%)
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYK 263
+ +L+ + +++ G ++D+ I Y + G +K +LF S + P S ++Y
Sbjct: 528 AELLLDKLVEAGGCIVDTAAVLMI-NLYGRRGLFQKAKSLF---NSLQKKDHPPSLYVYN 583
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
+ EA+ F M+E G + D + L+ ++ K A L K A++
Sbjct: 584 TMIKLCAVCKELEEAIFVFDRMEENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKKV 643
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G+ D + ++ G ++ L+V M+ A ++ S +++ FSK A
Sbjct: 644 GVAMDTVAYNTSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRA 703
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
V+ +E L S ++ Y+ +I+ Y +A +F EM+ KGF V Y++++
Sbjct: 704 VQAFEVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDA 763
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+ + G +A L++ M+ KGC P+ Y LM +G E L M+ R + PD
Sbjct: 764 FARAGLFAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPD 823
Query: 504 KVSYTTVISAY-NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
Y VI AY N + D C FY E + G ++ +V + Q E+ ++
Sbjct: 824 CRHYNEVIRAYGNVGKLSDACRIFY-ELKTVGIGLELGCFRTLVKIHLDHGQFEQGWQIY 882
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
+D+ S+ +D+ LY A+ AG + +A L+ +G
Sbjct: 883 KDL-SQSFTVDQNLYGIAVELCIGAGRRTEADQLKVELKG 921
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 170/386 (44%), Gaps = 5/386 (1%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
P + L+ +A K +A L + G E +A + Y + Y + +
Sbjct: 105 PSVIAYTTLLGIYGQAGKLTLAEETLSEMLDAGVEPDEVAGGCMLEAYARWERYDTLLEF 164
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
YE M+ G+V + Y ++ YK L+ + KL+ +Y I+
Sbjct: 165 YEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALMLWEDLLVEKLEPNFV---LYAIIIHI 221
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L K GR +A+ F+DM+ G L D +Y ++IC+ + + +E L+ + +++G++
Sbjct: 222 LNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLDMKKQGIVPS 281
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
++ ++ + G + + M+ + + + C+I+N + K Y A K+++
Sbjct: 282 KFTYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKAGLYEEAEKIFK 341
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ + G + + +Y S+ +++A K+F M +KG + +++++ + + G
Sbjct: 342 EMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFDVMAEKGLLTTRMTWNTLLHCFVRIG 401
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ A + M G NV Y ++++++ + + + E L EM V PD+ Y
Sbjct: 402 DVEQATKVYNDMVEAGS-ANVVTYGNMINLYSKFQMVEDAENLLAEMRESGVKPDEYIYG 460
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNG 534
+ + Y + D E + +G
Sbjct: 461 SFVKLYCNSDMIDKATMVVQEMKDDG 486
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 164/371 (44%), Gaps = 37/371 (9%)
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
F E ++ +P S Y L G++G+ A + +M + G+ D ++ +
Sbjct: 93 FFEWMKLQIPYSP-SVIAYTTLLGIYGQAGKLTLAEETLSEMLDAGVEPDEVAGGCMLEA 151
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+A E ++ ++G++ V +++ + L + E + KL+ +
Sbjct: 152 YARWERYDTLLEFYEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALMLWEDLLVEKLEPN 211
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+ I++ +K AV ++ + + G +P ++ Y +II A ++ Y ++E +++
Sbjct: 212 FVLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYL 271
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+M+++G Y+ M+ ++ K GR A +A+M+ GC + +Y S+++M+G+A
Sbjct: 272 DMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKAG 331
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYT----------------------------------- 508
+ EK++KEM+ + + SYT
Sbjct: 332 LYEEAEKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFDVMAEKGLLTTRMTWN 391
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
T++ + R + + K YN+ + G + G M+ ++SK +E+ LL +M+
Sbjct: 392 TLLHCFVRIGDVEQATKVYNDM-VEAGSANVVTYGNMINLYSKFQMVEDAENLLAEMRES 450
Query: 569 GTKLDERLYHS 579
G K DE +Y S
Sbjct: 451 GVKPDEYIYGS 461
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 125/259 (48%)
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
L+ +Y + G + + + M +A ++ + ++ +++ Y ++ YE + +G
Sbjct: 113 LLGIYGQAGKLTLAEETLSEMLDAGVEPDEVAGGCMLEAYARWERYDTLLEFYEAMRQRG 172
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
+P Y ++I + +S A ++ ++ + + V Y+ ++ + K GR DA+
Sbjct: 173 LVPSAHVYRTMIVTLYKAERHSDALMLWEDLLVEKLEPNFVLYAIIIHILNKEGRTEDAV 232
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
M+A G P+ +YN+++ G+ ++ E L+ +M+++ + P K +YT +I+ +
Sbjct: 233 HTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLDMKKQGIVPSKFTYTIMINVW 292
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
++A F + E + +G + D + ++ ++ K EE K+ ++M + G E
Sbjct: 293 SKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKAGLYEEAEKIFKEMDTLGLLSHE 352
Query: 575 RLYHSAMNALRDAGLQMQA 593
+ Y S +AG +A
Sbjct: 353 KSYTSMAKVRAEAGRHAEA 371
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A + +++ G P +V ++ AY R Y + + M+Q+G Y +M+
Sbjct: 126 AEETLSEMLDAGVEPDEVAGGCMLEAYARWERYDTLLEFYEAMRQRGLVPSAHVYRTMIV 185
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
K R DA+ L + + EPN +Y ++ + + +K+M P
Sbjct: 186 TLYKAERHSDALMLWEDLLVEKLEPNFVLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLP 245
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D++ Y T+I A + + Y + + G V + IM+ V+SK + + L
Sbjct: 246 DELLYNTIICALGKLGRYQESEALYLDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETL 305
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+M+ G DE +Y S +N AGL +A+
Sbjct: 306 AEMQRSGCIADEVVYCSIINMYGKAGLYEEAE 337
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
Query: 415 YSKAEKVFIEMQ-QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ +A + F M+ Q + V+AY++++ +YG+ G++ A +++M G EP+
Sbjct: 87 WRQAREFFEWMKLQIPYSPSVIAYTTLLGIYGQAGKLTLAEETLSEMLDAGVEPDEVAGG 146
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+++ + R + + + ++ M +R + P Y T+I +A + + + +
Sbjct: 147 CMLEAYARWERYDTLLEFYEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALMLWEDLLVE 206
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
+ + I++ + +K + E+ V +DM++ G DE LY++ + AL G ++
Sbjct: 207 KLEPNFVLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQES 266
Query: 594 QWL 596
+ L
Sbjct: 267 EAL 269
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 195/451 (43%), Gaps = 46/451 (10%)
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
E F S + Y + E+MKS G+ L Y ++ + KI DS+
Sbjct: 296 EPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADN 355
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
LF E K+ KL S + +Y + + +SG A + R+M+E GI +Y S++
Sbjct: 356 LFKEAKT-KLSS--LNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMH 412
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEV----CLKLVLMYIEEGLVEKTLDVVESMKNA 358
+ I +F+ +E G P + CL + +Y++ G V K L + + M++
Sbjct: 413 GYTIIQNENKCLVVFERLKECGF--KPSIISYGCL--LNLYVKIGKVAKALSISKEMESC 468
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+K ++ ++NGF + A ++E+++ G P + Y +I A+C++ +A
Sbjct: 469 GIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRA 528
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+ +MQ++ A+ ++ Y G ++ A+ + M+ GC P V YN+L+
Sbjct: 529 ICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHG 588
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG---- 534
R +++ + +M +TP++ +YT ++ Y + + +++ + + +G
Sbjct: 589 LVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLD 648
Query: 535 --------------GVIDRAIA-----------------GIMVGVFSKLSQIEELVKLLQ 563
G + A+A I++ +++ + E L++
Sbjct: 649 VYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMK 708
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
MK +G + Y S +NA AG +A+
Sbjct: 709 QMKEDGVPPNIHTYTSYINACCKAGDMQRAE 739
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 196/433 (45%), Gaps = 10/433 (2%)
Query: 156 SRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKS 214
S ++ + ++ + A L++ DG + + ++S M GY + ++V+E++K
Sbjct: 373 SNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKE 432
Query: 215 AGI---VLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGK 271
G ++ GC ++ Y KIG K ++ E +S + + Y +L +
Sbjct: 433 CGFKPSIISYGC---LLNLYVKIGKVAKALSISKEMESCGIK---HNNKTYSMLINGFIH 486
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
A F +M G+ D +IY LI +F + + A + ++ +++ M
Sbjct: 487 LHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRA 546
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
++ Y G ++ LD ++ M+ + + A+++G ++ AV V +++
Sbjct: 547 FRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMS 606
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
G P + TY I+ Y KA + F ++++ G V Y +++ K+GR++
Sbjct: 607 IAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQ 666
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
A+ + +M + N +IYN L+D R ++ + E L K+M+ V P+ +YT+ I
Sbjct: 667 SALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYI 726
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+A +A + K E G + ++ ++++S + +K ++MK G K
Sbjct: 727 NACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLK 786
Query: 572 LDERLYHSAMNAL 584
DE YH + +L
Sbjct: 787 PDEASYHCLVTSL 799
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 156/362 (43%), Gaps = 11/362 (3%)
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFS----THMYKILCDSLGKSGRAFEALKFFRDMK 286
Y K GD A F ++R ++ F H Y + D G AL +MK
Sbjct: 274 YAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRG-------ALSCVEEMK 326
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
+G+ Y+ LI FA I + + A+ LFKEA+ K + + ++ + + G +E
Sbjct: 327 SEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNME 386
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ ++V M+ + + ++++G++ + + V+E+L G P ++Y ++
Sbjct: 387 RAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLL 446
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
N Y +I +KA + EM+ G YS ++ + +A + +M G +
Sbjct: 447 NLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQ 506
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+ IYN L++ + N+ + + ++M++ ++ P ++ +I Y A + +
Sbjct: 507 PDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDT 566
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ R +G V ++ + +++ V +L M G +E Y M
Sbjct: 567 LDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAA 626
Query: 587 AG 588
+G
Sbjct: 627 SG 628
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 135/292 (46%)
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
+ +I +A + A F+ +G+ + V LV Y + L VE MK
Sbjct: 267 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 326
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ L+++ +++GF+K +A ++++ ++ + Y++II+A+C+
Sbjct: 327 SEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNME 386
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+AE++ EM++ G D + Y SM+ Y + + ++K G +P++ Y L+
Sbjct: 387 RAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLL 446
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+++ + + + + KEME + + +Y+ +I+ + +F + E +G
Sbjct: 447 NLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQ 506
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
DRAI +++ F K+ ++ + +L+ M+ E + R + + AG
Sbjct: 507 PDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAG 558
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/455 (20%), Positives = 182/455 (40%), Gaps = 29/455 (6%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F+P + L+ V+ K +S+S++ + + + T S L+ + F A
Sbjct: 435 FKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAF 494
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + + G + +N + + K+ I + EKM+ + + + I+E Y
Sbjct: 495 AIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGY 554
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
GD + +AL R+ P + Y L L + + A+ M GI
Sbjct: 555 AVAGDMK--SALDTLDLMRRSGCVP-TVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGIT 611
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y ++ +A+ ++ A E F + +E G+ D + L+ + G ++ L V
Sbjct: 612 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 671
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
M K+ + I +++G+++R W A + +Q+ G P TY S INA C+
Sbjct: 672 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 731
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+AEKV EM G V Y++++ + + A+ +MK G +P+
Sbjct: 732 AGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEAS 791
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV------- 524
Y+ L+ + R + +YT +IS E D+ V
Sbjct: 792 YHCLV----------------TSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVH 835
Query: 525 --KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
++ ++ GG + A+ I ++ L + E
Sbjct: 836 WSRWLHKIERTGGALTEALQRIFPPDWNSLEFLGE 870
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/245 (17%), Positives = 98/245 (40%), Gaps = 39/245 (15%)
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
S+ + A V +E++ P + + +I Y + A F M+ +G +
Sbjct: 244 SRPDNWQAVVSAFERIPK----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNA 299
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE---------------------------- 466
++S+V Y +R A+ V +MK++G E
Sbjct: 300 FVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKE 359
Query: 467 -------PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
N IY++++ H ++ N+ + E+L +EME + Y +++ Y +
Sbjct: 360 AKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQN 419
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ C+ + + G G ++ ++ K+ ++ + + + ++M+S G K + + Y
Sbjct: 420 ENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSM 479
Query: 580 AMNAL 584
+N
Sbjct: 480 LINGF 484
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 150/347 (43%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P T ++ + SL K+ R + F+ + GI D + LI F +T + A
Sbjct: 58 PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFS 117
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+F ++G + L+ G +++ L + + ++ ++NG
Sbjct: 118 VFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLC 177
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A ++ +L P V Y +II+ C+ L A ++ EM KG V
Sbjct: 178 KAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVF 237
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y++++ + G +++A L+ +MK K P+V+ +N L+D + + + L++EM
Sbjct: 238 TYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEM 297
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + + P+ V+YT++I + + + + + G + I++ K ++
Sbjct: 298 KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRL 357
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
E + Q + +G L+ R Y+ +N L AGL L+ EG
Sbjct: 358 ENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEG 404
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 169/390 (43%), Gaps = 10/390 (2%)
Query: 114 RPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
RP T ++ LV++K++ +++SL + F+ + PD T S L+ A
Sbjct: 56 RPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFA 115
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
++ + G + N+ + G + ++K+ + G LD Y ++
Sbjct: 116 FSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLING 175
Query: 231 YYKIGDSEKVAALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
K G+++ VA L LE S K D MY + L K+ +A + +M K
Sbjct: 176 LCKAGETKAVARLLRKLEGHSVKPDLV-----MYTTIIHCLCKNKLLGDACDLYSEMIVK 230
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI + Y +LI F + +K A L E + K + D L+ +EG +++
Sbjct: 231 GISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEA 290
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
+ + E MK+ + + ++++G K A+ + +++ QG P +Y +++A
Sbjct: 291 MSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDA 350
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
C+ A++ F + KG+ V Y+ M+ K G D M L +KM+ KGC PN
Sbjct: 351 LCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPN 410
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+ +++ + EK +EM R
Sbjct: 411 AITFKTIICALLEKDENDKAEKFLREMIAR 440
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 102/227 (44%), Gaps = 7/227 (3%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+Y +M GI + Y ++ + +G+ ++ +L E K + ++ + + IL D
Sbjct: 223 LYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINP---DVYTFNILID 279
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+L K G+ EA+ F +MK K + + Y SLI ++ A L K+ +E+G+
Sbjct: 280 ALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI-- 337
Query: 328 DPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
P V +L+ + G +E + + ++ ++NG K + +
Sbjct: 338 QPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMD 397
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
+ ++ +GC+P +T+ +II A KAEK EM +G K
Sbjct: 398 LKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGLLK 444
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 189/465 (40%), Gaps = 58/465 (12%)
Query: 107 AKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS----- 161
A K P FRP S + ++R L + ++S+ + ++ K + D + S
Sbjct: 77 ASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFE 136
Query: 162 ------C---VRARKFKIA------NTLLQVFITDGEIALL-----------------AF 189
C V +F +A N LL V + ++ L+ F
Sbjct: 137 LYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTF 196
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
N + K H ILV E+M S G+V D + +M+ + + G+ + K
Sbjct: 197 NILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGA----FRVKE 252
Query: 250 RKLDST-PFSTHMYKILCDSLGKSGRAFEALKF----------------FRDMKEKGILE 292
+ LD+ P + +L K GR EAL F + +MK KG
Sbjct: 253 QMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQP 312
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
D Y LI S +++ A L +E E G R+ L+ + + +E+ ++
Sbjct: 313 DEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIF 372
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
+ M+ L + +++G K R A ++ +Q+I +G P + TY S++ +CR
Sbjct: 373 DQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCRE 432
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
KA + M G + +V Y +++ K GR+ A L+ ++ KG Y
Sbjct: 433 GDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAY 492
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
N ++ + K ++ +L++EME + TPD +Y V + +
Sbjct: 493 NPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNS 537
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 182/441 (41%), Gaps = 42/441 (9%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTIL 207
P +T + LV V + + A + +V + G+I + +N + GY K +
Sbjct: 216 PSLYTYNFLVNGLVNSMFIESAEKVFEV-MDGGKIVPDTVTYNIMIKGYCKAGKLQKAME 274
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ M+ + D Y +++A Y D + +L+LE + R L+ P H Y ++
Sbjct: 275 KFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPP---HSYSLVIG 331
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L K + EA F M +KG + +IY +LI S
Sbjct: 332 GLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDS------------------------ 367
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
Y + G +E+ + + E MKN + +VNG K ++++
Sbjct: 368 -----------YSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELF 416
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ ++G + YAS+I+ + AE +F EM +KG + Y++++ K
Sbjct: 417 DFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKH 476
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G+I A+ L +M+ +GC+ V+ + L+D + + K W +M + +TP S+
Sbjct: 477 GKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASF 536
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+ + K ++ G + + A M+ K +I+E KL +
Sbjct: 537 RALAIGLCLCGKVARACKILDDLAPMGIIPETAFED-MINTLCKAQRIKEACKLADGIVD 595
Query: 568 EGTKLDERLYHSAMNALRDAG 588
G ++ R+ +NALR AG
Sbjct: 596 RGREIPGRIRTVLINALRKAG 616
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 156/363 (42%), Gaps = 3/363 (0%)
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
LV+ ++K G+++ +++++ +G E++ ++ K +D S + Y L
Sbjct: 169 LVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDP---SLYTYNFLV 225
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ L S A K F M I+ D Y +I + +++ A E F++ E K +
Sbjct: 226 NGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVK 285
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D + L+ E + L + M+ L+I ++ G K+R A V
Sbjct: 286 PDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAV 345
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+E + +GC Y ++I++Y + +A ++F M+ +GF+ V YS +V K
Sbjct: 346 FETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCK 405
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
+GR+ D M L + KG N Y SL+D G+A + E L++EM + D
Sbjct: 406 SGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYC 465
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y +I A + + D + + G I++ K + EE +K M
Sbjct: 466 YNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMI 525
Query: 567 SEG 569
+G
Sbjct: 526 DKG 528
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 163/378 (43%), Gaps = 5/378 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T ++I+ ++ K + D ++ NV PD T L+ +C R F +L
Sbjct: 251 PDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSL 310
Query: 175 -LQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L++ EI +++ +GG K V+E M G + Y ++++Y K
Sbjct: 311 YLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSK 370
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G E+ LF K+ + + Y +L + L KSGR + ++ F + KG+ +
Sbjct: 371 NGSMEEAMRLFERMKNEGFEPDAVT---YSVLVNGLCKSGRLDDGMELFDFCRNKGVAIN 427
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
YASLI ++ AE LF+E EKG RD ++ + G +++ L +
Sbjct: 428 AMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFG 487
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M+ + +++G K A+K ++++I +G P ++ ++ C
Sbjct: 488 RMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCG 547
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
++A K+ ++ G A+ M+ K RI++A L + +G E I
Sbjct: 548 KVARACKILDDLAPMGIIP-ETAFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRT 606
Query: 474 SLMDMHGRAKNLRQVEKL 491
L++ +A N V KL
Sbjct: 607 VLINALRKAGNSDLVIKL 624
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 160/372 (43%), Gaps = 40/372 (10%)
Query: 223 CYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFF 282
C+ ++E D K+ +F E K R L T + + L S G G E L +
Sbjct: 150 CHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANS---LIKSFGNLGLVEELLWVW 206
Query: 283 RDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
R MKE GI DPS+Y + L +F E+ EK
Sbjct: 207 RRMKENGI--DPSLYTY------NFLVNGLVNSMFIESAEK------------------- 239
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
V E M K+ + D ++ I + G+ K A++ + + + P ++T
Sbjct: 240 --------VFEVMDGGKI-VPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKIT 290
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y ++I A + +++EM+++G + +YS ++ K + +A + M
Sbjct: 291 YMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMN 350
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
KGC NV IY +L+D + + ++ + +L++ M+ PD V+Y+ +++ ++ D
Sbjct: 351 QKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLD 410
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
++ ++ R G I+ ++ K +IE+ L ++M +G D Y++ +
Sbjct: 411 DGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAII 470
Query: 582 NALRDAGLQMQA 593
+AL G QA
Sbjct: 471 DALAKHGKIDQA 482
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 35/230 (15%)
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ S+I A K VF E++ +G A +S++ +G G + + +W+ +MK
Sbjct: 151 HVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMK 210
Query: 462 AKGCEPNVWIYNSLMD-----------------MHG------------------RAKNLR 486
G +P+++ YN L++ M G +A L+
Sbjct: 211 ENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQ 270
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ + +++ME + V PDK++Y T+I A R+FD C+ Y E G I +++
Sbjct: 271 KAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVI 330
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
G K + E + + M +G + + +Y + +++ G +A L
Sbjct: 331 GGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRL 380
>gi|255661192|gb|ACU25765.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 426
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 163/338 (48%), Gaps = 6/338 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRR 378
+ G D ++ ++ + L + ++ M+ A + + D +S ++ + +
Sbjct: 70 LKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGV-MPDTVSYTTLLTMHVENK 128
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y+
Sbjct: 129 RFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYN 188
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHA 308
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D +A++ L AG +A W+
Sbjct: 309 KRLLHELK----RPDNIPRDTAIHILAAAGRJEEATWV 342
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 164/351 (46%), Gaps = 11/351 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+NS + + K ++ + +M++AG++ D+ Y ++ + + + ++F
Sbjct: 79 LVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVENKRFLEALSVFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L + G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ + + + + GRJ +A W+ + G ++ ++ L+ + + K
Sbjct: 314 ELKRPD----NIPRDTAIHILAAAGRJEEATWVFRQAIDAGEVKDITVFERLIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
V +++ +M R+ PD V++AY + EF+ Y E + G
Sbjct: 370 KYXNVVEVFDKMRERRYFPDSNVIALVLNAYGKLHEFEKANSVYMEMQDEG 420
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/397 (19%), Positives = 172/397 (43%), Gaps = 11/397 (2%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+++ + + K ++ + + +KM+ + D Y ++E K+ D K ++F
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF---- 67
Query: 249 SRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
+L + F+ + Y + + GK+ EA +M+ G++ D Y +L+
Sbjct: 68 -SRLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVE 126
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
A +F E E L D C ++ +Y + G+ ++ + M+ ++ +
Sbjct: 127 NKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVS 186
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
++ + + A+ ++ + + VTY S++ Y + + KA + EMQ
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 246
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+G + + YS++++++GK G++ A L K++ G E + +Y +++ + RA +
Sbjct: 247 NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVA 306
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
++L E++R PD + T I A + + + G V D + ++
Sbjct: 307 HAKRLLHELKR----PDNIPRDTAIHILAAAGRJEEATWVFRQAIDAGEVKDITVFERLI 362
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+FSK + +V++ M+ D + +NA
Sbjct: 363 HLFSKYKKYXNVVEVFDKMRERRYFPDSNVIALVLNA 399
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YNS++++ G+AK R+ L EM V PD VSYTT+++ +
Sbjct: 67 FSRLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 147/362 (40%), Gaps = 24/362 (6%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ +I ++K + SL + + V+PD + + L+ V ++F A
Sbjct: 75 FAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVENKRFLEA- 133
Query: 173 TLLQVFITDGEIA----LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
L VF EI L N + Y +L M ++ M+ GI + Y ++
Sbjct: 134 --LSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYNTLL 191
Query: 229 EAYYKIGDSE---KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
Y GD+E + LF + + ++ + Y + GK+ +A ++M
Sbjct: 192 RVY---GDAELFGEAIHLFRLMQRKNIEQNVVT---YNSMMMIYGKTLEHEKANNLIQEM 245
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+ +GI + Y+++I + + ++ A LF++ G+ D + +++ Y GLV
Sbjct: 246 QNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLV 305
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
++ +K D + W V+ Q I G + + +
Sbjct: 306 AHAKRLLHELKRPDNIPRDTAIHILAAAGRJEEATW----VFRQAIDAGEVKDITVFERL 361
Query: 406 INAYCRIALYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
I+ + + Y +VF +M+++ + D V+A ++ YGK A + +M+ +
Sbjct: 362 IHLFSKYKKYXNVVEVFDKMRERRYFPDSNVIAL--VLNAYGKLHEFEKANSVYMEMQDE 419
Query: 464 GC 465
GC
Sbjct: 420 GC 421
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++++G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P T ++ L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIPRDTAIH-----ILAAAGRJEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ LI F+ + E+F + E+ D V ++ Y + EK
Sbjct: 351 EVKDITVFERLIHLFSKYKKYXNVVEVFDKMRERRYFPDSNVIALVLNAYGKLHEFEKAN 410
Query: 350 DVVESMKNAKLKISD 364
V M++ SD
Sbjct: 411 SVYMEMQDEGCXFSD 425
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 2/237 (0%)
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
E GL K D + + K + C ++ + R + A ++ +++ +GC P V
Sbjct: 46 ESGLALKFFDWAKEQEGYKHDV--CTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVV 103
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TY +I+AY R +A ++F +MQ++G V Y ++V ++ K G +AM + KM
Sbjct: 104 TYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKM 163
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ G +P+ + Y+ ++ G+A + + KL++EM R P V+Y +I ++ +
Sbjct: 164 QQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNY 223
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
M +K YN+ + G DR IM+ V ++ ++E + +M+ G D +Y
Sbjct: 224 VMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIY 280
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 146/303 (48%), Gaps = 2/303 (0%)
Query: 262 YKILCDSLGKSGRAFEAL-KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
Y + +G++ R FEA + ++M+ +G Y LI ++ + A +F +
Sbjct: 70 YTTMIGIMGRA-RNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLGEAMRIFYQM 128
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
+E+G D LV ++ + G + +D+ + M+ A + I++ K
Sbjct: 129 QEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKV 188
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A+K++E+++ +G P VTY II+ + Y A K++ +MQ GF V YS M
Sbjct: 189 SEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIM 248
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ + G+ G +++A + +M+ G P+ IY ++DM G+A+N + + +++M +
Sbjct: 249 MEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAERALEWYQKMLDSGL 308
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
TP+ +++ +Y R ++FD+ + G V I++ + +Q ++V
Sbjct: 309 TPNVQISNSLLGSYLRMQQFDLAFGVIETMKAWGLVPTLQTHTILLSSCTASAQHHQVVN 368
Query: 561 LLQ 563
L+
Sbjct: 369 LMH 371
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 117/239 (48%), Gaps = 9/239 (3%)
Query: 359 KLKISDCISCAI-----VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+++ C C + ++ + + A++++ Q+ +GC P +VTY ++++ + +
Sbjct: 92 EMRREGCEPCVVTYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAG 151
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ A ++ +MQQ GF YS ++ GK G++ +A+ L +M +G P++ YN
Sbjct: 152 FHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYN 211
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
++D+ ++ N KL+ +M+ PD+V+Y+ ++ + +NE
Sbjct: 212 IIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQA 271
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
G V D I G+MV ++ K E ++ Q M G + ++ N+L + L+MQ
Sbjct: 272 GWVPDAPIYGVMVDMWGKARNAERALEWYQKMLDSGLTPNVQI----SNSLLGSYLRMQ 326
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 140/297 (47%), Gaps = 9/297 (3%)
Query: 278 ALKFFRDMKEK-GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--- 333
ALKFF KE+ G D Y ++I + L +E +G E C+
Sbjct: 50 ALKFFDWAKEQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGC----EPCVVTY 105
Query: 334 -KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
+L+ Y + + + + M+ C +V+ SK + A+ +Y+++
Sbjct: 106 NRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQ 165
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
G P TY+ II+ + S+A K+F EM ++GF +V Y+ ++ + K+G
Sbjct: 166 AGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVM 225
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
AM L M+ G P+ Y+ +M++ G+ +L++ E ++ EME+ PD Y ++
Sbjct: 226 AMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVD 285
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ +AR + +++Y + +G + I+ ++G + ++ Q + +++ MK+ G
Sbjct: 286 MWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIETMKAWG 342
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 147/320 (45%), Gaps = 4/320 (1%)
Query: 90 MLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVL 149
+LK + LA +++ AK+ ++ + T +I + +++ +++ L ++ +
Sbjct: 40 VLKHQKESGLALKFFDWAKEQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCE 99
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILV 208
P T +RL+ + RA A + +G + + + + ++K + + + +
Sbjct: 100 PCVVTYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDM 159
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
Y+KM+ AG D+ Y I+ K G + LF E R + + Y I+ D
Sbjct: 160 YQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVT---YNIIIDL 216
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
KSG A+K + DM++ G D Y+ ++ I ++ AE +F E E+ G + D
Sbjct: 217 QAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPD 276
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
+ +V M+ + E+ L+ + M ++ L + IS +++ + + + + A V E
Sbjct: 277 APIYGVMVDMWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIE 336
Query: 389 QLISQGCIPGQVTYASIINA 408
+ + G +P T+ ++++
Sbjct: 337 TMKAWGLVPTLQTHTILLSS 356
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%)
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ +G + +V Y +++ + GRA+N +L +EM R P V+Y +I AY RA
Sbjct: 59 EQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFL 118
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
++ + + + G DR +V + SK + + + Q M+ G + D Y
Sbjct: 119 GEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVI 178
Query: 581 MNALRDAG 588
++ L AG
Sbjct: 179 IHCLGKAG 186
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 200/482 (41%), Gaps = 39/482 (8%)
Query: 117 KSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQ 176
+ L ++R L +K +++ K P A + ++ + +++ + L
Sbjct: 1149 PTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYN 1208
Query: 177 VFITDGE--IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
T+G + +++ + + KL S I + +MK G+ + Y ++ ++K
Sbjct: 1209 EMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKF 1268
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
D+ +LF E + + F+ Y L LGK+GR EA FF +M+ +G D
Sbjct: 1269 NDAHGALSLFEEMRHQYCRPDVFT---YTELIRGLGKAGRIDEAYHFFCEMQREGCRPDT 1325
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
++I + A +LF+E E LR C+ V+ Y ++++
Sbjct: 1326 VFMNNMINFLGKAGRLDDAMKLFQEME---TLR----CIPSVVTYN---------TIIKA 1369
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
+ +K + S+ S W +E++ G P TY+ +I+ +C+
Sbjct: 1370 LFESKSRASEVPS-------------W-----FERMKESGISPSSFTYSILIDGFCKTNR 1411
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
KA + EM +KGF C AY S++ GK R A L ++K + +Y
Sbjct: 1412 MEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAV 1471
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
++ G+A L ++ EM + PD +Y ++S R D + + +G
Sbjct: 1472 MIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHG 1531
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ D I++ +K +++L +MK + D Y++ + AL AG+ +A
Sbjct: 1532 CIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAS 1591
Query: 595 WL 596
L
Sbjct: 1592 KL 1593
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 145/346 (41%), Gaps = 5/346 (1%)
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
T Y L + K GR A++ +MKE G+ IY LI F + A LF+
Sbjct: 1220 TVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFE 1279
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
E + D +L+ + G +++ M+ + ++N K
Sbjct: 1280 EMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAG 1339
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV---FIEMQQKGFDKCVV 435
A+K+++++ + CIP VTY +II A S+A +V F M++ G
Sbjct: 1340 RLDDAMKLFQEMETLRCIPSVVTYNTIIKAL--FESKSRASEVPSWFERMKESGISPSSF 1397
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
YS ++ + KT R+ AM L+ +M KG P Y SL+D G+AK +L++E+
Sbjct: 1398 TYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 1457
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ + Y +I +A D + ++E G D ++ ++ +
Sbjct: 1458 KENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGML 1517
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+E + ++ M+ G D Y+ +N L G +A + N +
Sbjct: 1518 DEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK 1563
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 6/192 (3%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA---YSSMVAMYGKTGRIRDAMWLV 457
TY ++I+ + Y + K+ EM + CVV S +V M G +R A+ +
Sbjct: 1115 TYMALIHCLEVVEQYGEMWKMIQEMVRNPI--CVVTPTELSDVVRMLGNAKMVRQAITIF 1172
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR-KVTPDKVSYTTVISAYNR 516
++K + C+P YNS++ M +V +L+ EM PD V+Y+ +ISA+ +
Sbjct: 1173 YQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCK 1232
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
D ++ NE + G I +++ +F K + + L ++M+ + + D
Sbjct: 1233 LGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFT 1292
Query: 577 YHSAMNALRDAG 588
Y + L AG
Sbjct: 1293 YTELIRGLGKAG 1304
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 36/209 (17%)
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM----------- 443
C+ + ++ + +A +F +++ + AY+SM+ M
Sbjct: 1145 CVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVH 1204
Query: 444 -------------------------YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+ K GR A+ L+ +MK G +P IY L+ +
Sbjct: 1205 QLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIAL 1264
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ + L++EM + PD +YT +I +A D F+ E + G D
Sbjct: 1265 FFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPD 1324
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
M+ K ++++ +KL Q+M++
Sbjct: 1325 TVFMNNMINFLGKAGRLDDAMKLFQEMET 1353
>gi|255661194|gb|ACU25766.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 426
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 163/338 (48%), Gaps = 6/338 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRR 378
+ G D ++ ++ + L + ++ M+ A + + D +S ++ + +
Sbjct: 70 LKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGV-MPDTVSYTTLLTMHVENK 128
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y+
Sbjct: 129 RFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYN 188
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 249 GIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHA 308
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D +A++ L AG +A W+
Sbjct: 309 KRLLHELK----RPDNIPRDTAIHILAAAGRLEEATWV 342
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 164/351 (46%), Gaps = 11/351 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+NS + + K ++ + +M++AG++ D+ Y ++ + + + ++F
Sbjct: 79 LVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVENKRFLEALSVFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L + G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ + + + + GR+ +A W+ + G ++ ++ L+ + + K
Sbjct: 314 ELKRPD----NIPRDTAIHILAAAGRLEEATWVFRQAIDAGEVKDITVFERLIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
V +++ +M R+ PD V++AY + EF+ Y E + G
Sbjct: 370 KYSNVVEVFDKMRERRYFPDSNVIALVLNAYGKLHEFEKANSVYMEMQDEG 420
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/398 (18%), Positives = 170/398 (42%), Gaps = 11/398 (2%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+++ + + K ++ + + +KM+ + D Y ++E K+ D K ++F
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF--- 67
Query: 248 KSRKLDSTPFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+L + F+ + Y + + K+ EA +M+ G++ D Y +L+
Sbjct: 68 --SRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHV 125
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
A +F E E L D C ++ +Y + G+ ++ + M+ ++ +
Sbjct: 126 ENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVV 185
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++ + + A+ ++ + + VTY S++ Y + + KA + EM
Sbjct: 186 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 245
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
Q +G + + YS++++++ K G++ A L K++ G E + +Y +++ + RA +
Sbjct: 246 QNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLV 305
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
++L E++R PD + T I A + + + G V D + +
Sbjct: 306 AHAKRLLHELKR----PDNIPRDTAIHILAAAGRLEEATWVFRQAIDAGEVKDITVFERL 361
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ +FSK + +V++ M+ D + +NA
Sbjct: 362 IHLFSKYKKYSNVVEVFDKMRERRYFPDSNVIALVLNA 399
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YNS++++ +AK R+ L EM V PD VSYTT+++ +
Sbjct: 67 FSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
+ F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 148/362 (40%), Gaps = 24/362 (6%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P+ +I ++K + SL + + V+PD + + L+ V ++F A
Sbjct: 75 FAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVENKRFLEA- 133
Query: 173 TLLQVFITDGEIA----LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
L VF EI L N + Y +L M ++ M+ GI + Y ++
Sbjct: 134 --LSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYNTLL 191
Query: 229 EAYYKIGDSE---KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
Y GD+E + LF + + ++ + Y + GK+ +A ++M
Sbjct: 192 RVY---GDAELFGEAIHLFRLMQRKNIEQNVVT---YNSMMMIYGKTLEHEKANNLIQEM 245
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+ +GI + Y+++I + + ++ A LF++ G+ D + +++ Y GLV
Sbjct: 246 QNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLV 305
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
++ +K D + W V+ Q I G + + +
Sbjct: 306 AHAKRLLHELKRPDNIPRDTAIHILAAAGRLEEATW----VFRQAIDAGEVKDITVFERL 361
Query: 406 INAYCRIALYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
I+ + + YS +VF +M+++ + D V+A ++ YGK A + +M+ +
Sbjct: 362 IHLFSKYKKYSNVVEVFDKMRERRYFPDSNVIAL--VLNAYGKLHEFEKANSVYMEMQDE 419
Query: 464 GC 465
GC
Sbjct: 420 GC 421
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 196 YNKLHMYYSTILVYEK-------MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
YN + M Y L +EK M++ GI +S Y I+ + K+G ++ A LF + +
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLR 281
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE-KGILEDPSIYASLICSFASI 307
+ ++ +Y+ + + ++G A + ++K I D +I+ A+
Sbjct: 282 NSGVE---IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHI-----LAAA 333
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++ A +F++A + G ++D V +L+ ++ + ++V + M+ + +
Sbjct: 334 GRLEEATWVFRQAIDAGEVKDITVFERLIHLFSKYKKYSNVVEVFDKMRERRYFPDSNVI 393
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
++N + K + A VY ++ +GCI
Sbjct: 394 ALVLNAYGKLHEFEKANSVYMEMQDEGCI 422
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 156/331 (47%), Gaps = 4/331 (1%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+EKM G+ +++++ G + + E + + + S +Y L D+
Sbjct: 327 FEKMNGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNAI---VYNTLMDA 383
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
KS R EA F +MK KGI + + L+ +++ + ++ E+L E ++ G+ +
Sbjct: 384 YCKSNRVEEAEGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEKLMAEMQDAGLKPN 443
Query: 329 PEVCLKLVLMY-IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ L+ Y ++ + + D MK +K + A+++ +S + A +
Sbjct: 444 AKSYTCLISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAF 503
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
E + +G P TY ++++A+ R K++ M++ + V ++++V + K
Sbjct: 504 ENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRRYKVEGTRVTFNTLVDGFAKH 563
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G ++A +++K G P V YN LM+ + R ++ +L +EM + PD V+Y
Sbjct: 564 GHYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGQHSKLPELLEEMAAHNLKPDSVTY 623
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+T+I A+ R R+F ++ E +G VID
Sbjct: 624 STMIYAFLRVRDFSQAFFYHQEMVKSGQVID 654
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 149/318 (46%), Gaps = 13/318 (4%)
Query: 279 LKFFRDMKEKGILEDPSIYASLICS--FASITEVKLAEEL---FKEAEEKGMLRDPEVCL 333
L FF+ M+ ++PS+ C+ F + + ++ ++L F RD V
Sbjct: 217 LYFFQWMRS----QEPSLVTPRACTVLFPLLGKARMGDKLMLLFTNLPSGREFRDVHVYN 272
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA--AVKVYEQLI 391
+ + G E V ESM+ + + D ++C+I+ ++ G+ A A + +E++
Sbjct: 273 AAISGLLSSGRCEDAWKVYESMEADNV-LPDHVTCSIMVIVMRKLGHSAKDAWQFFEKMN 331
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
+G G+ ++I ++C L S+A + E+++KG + Y++++ Y K+ R+
Sbjct: 332 GKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDAYCKSNRVE 391
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
+A L +MK KG + +N LM + R VEKL EM+ + P+ SYT +I
Sbjct: 392 EAEGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEKLMAEMQDAGLKPNAKSYTCLI 451
Query: 512 SAYNRAREF-DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
SAY + + DM + + + +G ++ +S E+ ++M+ EG
Sbjct: 452 SAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQREGI 511
Query: 571 KLDERLYHSAMNALRDAG 588
K Y + ++A R AG
Sbjct: 512 KPSIETYTALLDAFRRAG 529
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 140/336 (41%), Gaps = 12/336 (3%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL------A 313
H+Y L SGR +A K + M+ +L D + CS I KL A
Sbjct: 269 HVYNAAISGLLSSGRCEDAWKVYESMEADNVLPD-----HVTCSIMVIVMRKLGHSAKDA 323
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+ F++ KG+ EV L+ + EGL+ + L ++ ++ + + + +++
Sbjct: 324 WQFFEKMNGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDA 383
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+ K A ++ ++ ++G + T+ ++ AY R EK+ EMQ G
Sbjct: 384 YCKSNRVEEAEGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEKLMAEMQDAGLKPN 443
Query: 434 VVAYSSMVAMYGKTGRIRD-AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+Y+ +++ YGK + D A KMK G +P Y +L+ + + + +
Sbjct: 444 AKSYTCLISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAF 503
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+ M+R + P +YT ++ A+ RA + +K + R R +V F+K
Sbjct: 504 ENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRRYKVEGTRVTFNTLVDGFAKH 563
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+E ++ + G Y+ MNA G
Sbjct: 564 GHYKEARDVISKFANVGLHPTVMTYNMLMNAYARGG 599
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 189/460 (41%), Gaps = 44/460 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD+ + + + G+ K + +YY E + P T +L+ L ++ K +
Sbjct: 104 PDSVTYTAIVDGLFK-AGNYDAGLEYY-EKMVASKCEPTLLTYTVLVDGLCKAHKVERAC 161
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL-LAFNSAMGGY 196
+ E+ PD S L+ +A + A L+ + I G +A+ S + G
Sbjct: 162 DVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGL 221
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K + ++M+ + Y I+ Y +G E+ A+ E R D P
Sbjct: 222 CKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADR--DCAP 279
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
T Y + ++L GR EA K F M EKG D Y +I +F
Sbjct: 280 -DTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFC----------- 327
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+EG + V+ M A +K + I I++GF K
Sbjct: 328 ------------------------KEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVK 363
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG--FDKCV 434
A+++Y++++ G +P VTY ++INA C++ +A ++ EMQ++ + +
Sbjct: 364 SSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSI 423
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V YS ++ GK G A L+A+M G P+ + Y SL+ A + + +L +E
Sbjct: 424 VTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEE 483
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
M + + PD +Y T++ R+ + D E NG
Sbjct: 484 MLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNG 522
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 163/383 (42%), Gaps = 5/383 (1%)
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
DS Y I++ +K G+ + + + + K + T + Y +L D L K+ + A
Sbjct: 105 DSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLT---YTVLVDGLCKAHKVERAC 161
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
F +M KG D Y+SLI + V A +L +G +V
Sbjct: 162 DVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGL 221
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ G +++ + ++ M+ +L+ IV G+ A V E++ + C P
Sbjct: 222 CKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDT 281
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
++Y I A I +AEKVF M +KG + Y ++ + K G + A ++
Sbjct: 282 ISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRL 341
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M +PN +IY +MD ++ L + +L++ + + + P V+Y TVI+A + ++
Sbjct: 342 MDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKK 401
Query: 520 FDMCVKFYNEFRMNGGVIDRAIA--GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
D ++ E + ++ +I +++ K+ E LL +M G D Y
Sbjct: 402 MDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTY 461
Query: 578 HSAMNALRDAGLQMQAQWLQQNF 600
S + L AG +A L +
Sbjct: 462 TSLIQTLAGAGKVSRAMELLEEM 484
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 143/319 (44%), Gaps = 14/319 (4%)
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAEELFKEAEEKGM 325
+L + G+ +AL FF+ + +P++ + L+ FA+ + ++ L +E + +G+
Sbjct: 6 ALVRGGQLSDALGFFQSS-----ISEPNVSSFNILLRGFAARDDFEVVNALLREMKARGI 60
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC-------AIVNGFSKRR 378
+ ++ ++K + S ++ + I AIV+G K
Sbjct: 61 TSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAG 120
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
Y A ++ YE++++ C P +TY +++ C+ +A VF EM +KG ++AYS
Sbjct: 121 NYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYS 180
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
S++ K GR+ +A LV M A+G P Y S++ + +++ K +EM RR
Sbjct: 181 SLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRR 240
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
++ P +Y+ +++ Y + + E D + + + + EE
Sbjct: 241 RLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEA 300
Query: 559 VKLLQDMKSEGTKLDERLY 577
K+ + M +G K D Y
Sbjct: 301 EKVFETMVEKGCKPDMHTY 319
>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
Length = 1014
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 123/562 (21%), Positives = 233/562 (41%), Gaps = 18/562 (3%)
Query: 13 SALINTTYTCMKKSYRHTLFSTCKAFPFVTVNPSSIIN---HRFFQVNASTNFPTIELNR 69
SALIN + +R + +F V+ N II+ HR V A T + + R
Sbjct: 421 SALINEGMITEAEHFRQYMSRMKISFDSVSFN--CIIDSYCHRGNIVEAFTVYDA--MVR 476
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
H P+ + + L G+ + + A + +P EK T L+ + +
Sbjct: 477 YGHS----PNVCTYQNLLRGLCQGGHLVQ-AKQFMFCLLDIPSAIDEK-TFNALLLGICK 530
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLA 188
D + L E N LPD HT + L++ R K A +LQ+ + G + +A
Sbjct: 531 YGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVA 590
Query: 189 FNSAMGGY-NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+ + G N+ + ++ + E + G+ D Y +M Y K G+ + + +
Sbjct: 591 YTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDM 650
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
++ S Y IL K G+ ++L ++ M KGI D Y LI +
Sbjct: 651 YQSEVYPNSAS---YNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSEC 707
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+ +A + ++ +G+ D V L+ + E+ + L + MK ++ S
Sbjct: 708 GLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTY 767
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
A++NG ++ + +V +++ G P Y +++NA CR+ +A ++ EM+
Sbjct: 768 SAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKA 827
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G VA SS++ K G++ +A+ + + M G P V + +LM + +
Sbjct: 828 LGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIAD 887
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
L + ME ++ D VSY +I+ + + + Y E + G + + G
Sbjct: 888 ALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTG 947
Query: 548 VFSKLSQIEELVKLLQDMKSEG 569
++ +LL+D++ G
Sbjct: 948 AMYSTGIMQNGEELLEDIEERG 969
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 101/526 (19%), Positives = 205/526 (38%), Gaps = 65/526 (12%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+PD +++ ++G + + Y + + ++ F P +T +I ++++ D
Sbjct: 324 IPDECTYNTLINGFFGEGKINHAHYVFNHMLRQ--TFVPSVATYTTMIDGYCRNRRIDKA 381
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
+S+ + +I V+P + A +L+ + DG
Sbjct: 382 LSVLSEMQITGVMPS---------------EISKAKQILKSMLEDG-------------- 412
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
I+ Y + + G++ ++ + Q M + KI DS
Sbjct: 413 -----IDPDIVTYSALINEGMITEAEHFRQYM-SRMKIS----------------FDSVS 450
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
F+ + DS G EA + M G + Y +L+ + A++
Sbjct: 451 FNC-----IIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQF 505
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ D + L+L + G +++ LD+ E M +++GF +
Sbjct: 506 MFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCR 565
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ-QKGFDKCVV 435
+ A+ + + ++ +G +P V Y ++N A VF E+ ++G +
Sbjct: 566 KGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCI 625
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
AY+S++ Y K G I +++ M PN YN LM + + + L+K M
Sbjct: 626 AYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYM 685
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
R+ + PD V+Y +I + D+ VKF + + G DR + I++ FS+ S++
Sbjct: 686 VRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKM 745
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
++L MK + Y + +N L ++ +L Q+ E
Sbjct: 746 HNALQLFNCMKWLRMSPSSKTYSAMINGL------IRKNYLDQSHE 785
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 193/471 (40%), Gaps = 62/471 (13%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE------FRPEKSTLKLLIRYLVQSKK 132
D K F++ L G+ K Y +EA L E P+ T +L+ + K
Sbjct: 517 DEKTFNALLLGICK--------YGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGK 568
Query: 133 WDSIVSLSEDFKIYNVLPD--AHTCSRLVASCVRARKFKIANTLLQVFIT-DGEIA-LLA 188
+ + + V+PD A+TC L+ + + K A+ + Q I +G A +A
Sbjct: 569 ILPALIMLQMMLDKGVVPDTVAYTC--LLNGLINEGQVKAASYVFQEIICKEGLYADCIA 626
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LE 246
+NS M GY K + + M + + +S Y +M Y K G K L+ +
Sbjct: 627 YNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMV 686
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
K + D+ Y++L L + G A+KF M +GI D ++ LI +F+
Sbjct: 687 RKGIRPDNVT-----YRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSE 741
Query: 307 ITEVKLAEELF-----------------------------------KEAEEKGMLRDPEV 331
+++ A +LF +E + G+ +
Sbjct: 742 KSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTH 801
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
+ LV G +++ + E MK + +D +I+ G K AV V+ ++
Sbjct: 802 YIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMM 861
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
G +P T+ ++++ C+ + + A + M+ VV+Y+ ++ K RI
Sbjct: 862 RSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRIS 921
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
DA+ L +MK+KG PNV Y +L ++ E+L +++E R + P
Sbjct: 922 DALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERGLIP 972
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/453 (20%), Positives = 180/453 (39%), Gaps = 41/453 (9%)
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
SL+ +F + D TC+ L+ S +F+ A +LQ T + +N+ + Y
Sbjct: 214 SLAHNFPL-----DVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRLSNSVTYNTILHWYV 268
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
K + + + V E M+ I D Y +++ +I S + A L + RK D P
Sbjct: 269 KKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSAR--AFLLLKRMRKDDLIP- 325
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---CSFASI------- 307
Y L + G+ A F M + + + Y ++I C I
Sbjct: 326 DECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVL 385
Query: 308 ----------TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
+E+ A+++ K E G+ DP++ L I EG++ + + M
Sbjct: 386 SEMQITGVMPSEISKAKQILKSMLEDGI--DPDIVTYSAL--INEGMITEAEHFRQYMSR 441
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
K+ I++ + R A VY+ ++ G P TY +++ C+ +
Sbjct: 442 MKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQ 501
Query: 418 AEK---VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
A++ +++ +K +++++ K G + +A+ L KM C P++ Y
Sbjct: 502 AKQFMFCLLDIPSAIDEK---TFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTI 558
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L+ R + + + M + V PD V+YT +++ + + E
Sbjct: 559 LLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKE 618
Query: 535 GVIDRAIA--GIMVGVFSKLSQIEELVKLLQDM 565
G+ IA +M G + K I + +++ DM
Sbjct: 619 GLYADCIAYNSLMNG-YLKGGNINTIKRMMSDM 650
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 147/361 (40%), Gaps = 36/361 (9%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
H Y IL + G+ AL + M +KG++ D Y L+ + +VK A +F+E
Sbjct: 554 HTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQE 613
Query: 320 A---------------------------EEKGMLRD-------PEVCLKLVLM--YIEEG 343
K M+ D P +LM Y++ G
Sbjct: 614 IICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGG 673
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
K+L + + M ++ + ++ G S+ AVK E+++ +G P ++ +
Sbjct: 674 QFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFD 733
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
+I A+ + A ++F M+ YS+M+ + + + ++ +M
Sbjct: 734 ILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQV 793
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
G +PN Y +L++ R + + +L +EM+ + P V+ +++I + + +
Sbjct: 794 GLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEA 853
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
V ++ +G V A ++ K S+I + + L + M+S K+D Y+ +
Sbjct: 854 VIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITG 913
Query: 584 L 584
L
Sbjct: 914 L 914
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 19/203 (9%)
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
+ VTY +I++ Y + + A V +M++ + Y+ M+ + R A
Sbjct: 254 LSNSVTYNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFL 313
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L+ +M+ P+ YN+L++ + ++ M R+ P +YTT+I Y
Sbjct: 314 LLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYC 373
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
R R D + +E + I G+M SK QI L+ M +G D
Sbjct: 374 RNRRIDKALSVLSEMQ---------ITGVMPSEISKAKQI------LKSMLEDGIDPDIV 418
Query: 576 LYHSAMNALRDAGLQMQAQWLQQ 598
Y +AL + G+ +A+ +Q
Sbjct: 419 TY----SALINEGMITEAEHFRQ 437
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 127/338 (37%), Gaps = 77/338 (22%)
Query: 61 NFPTIELNRDSHHQTAV-PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKST 119
N TI+ +Q+ V P++ ++ +HG +K Q + Y Y +K RP+ T
Sbjct: 639 NINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRK--GIRPDNVT 696
Query: 120 LKLLIRYLVQSKKWDS-----------------------IVSLSEDFKIYNVL------- 149
+LLI L + D I + SE K++N L
Sbjct: 697 YRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMK 756
Query: 150 -----PDAHTCSRLVASCVRA----RKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLH 200
P + T S ++ +R + ++ +LQV + +A +A K+
Sbjct: 757 WLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKID 816
Query: 201 MYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE-------------- 246
+ + E+MK+ GIV I+ K G E+ +F
Sbjct: 817 RAFR---LKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFT 873
Query: 247 ------CKSRKL-DSTPFSTHM-----------YKILCDSLGKSGRAFEALKFFRDMKEK 288
CK K+ D+ M Y +L L K R +AL + +MK K
Sbjct: 874 TLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSK 933
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
G+ + + Y +L + S ++ EEL ++ EE+G++
Sbjct: 934 GLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERGLI 971
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 111/514 (21%), Positives = 218/514 (42%), Gaps = 27/514 (5%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A D + E + RP L + ++K++D ++ L + ++ + + +T S ++
Sbjct: 56 AVDLFQEMTR-SRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 160 ASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG-- 216
C R RK +A + + I G E + F++ + G + + ++M G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 217 ---IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH------MYKILCD 267
I L++ + K+ D A L ++ ++ T F + + K++C
Sbjct: 175 PTLITLNALVNGLCLNG--KVSD----AVLLID----RMVETGFQPNEVTYGPVLKVMC- 223
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
KSG+ A++ R M+E+ I D Y+ +I + A LF E E KG
Sbjct: 224 ---KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D + L+ + G + ++ M K+ A+++ F K A +++
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++I +G P VTY S+I+ +C+ KA + M KG + ++ ++ Y K
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
I D + L KM +G + YN+L+ L ++L++EM R+V PD VSY
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
++ E + ++ + + + +D I I++ S++++ L +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 568 EGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+G K D + Y+ + L G +A L + E
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 175/455 (38%), Gaps = 76/455 (16%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+EL R + DA K+ + G+ KD A++ +NE + + F+ + LI
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN-AFNLFNEME-IKGFKADIIIYTTLI 289
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
R + +WD L D + PD S L+ V+ K + A L
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL---------- 339
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+++M GI D+ Y +++ + K +K +
Sbjct: 340 ------------------------HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
S+ + + IL + K+ + L+ FR M +G++ D Y +LI F
Sbjct: 376 DLMVSKGCGP---NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI-EEGLVEKTLDVVESMKNAKLKIS 363
+ ++++A+ELF+E + +R V K++L + + G EK L++ E ++ +K+++
Sbjct: 433 CELGKLEVAKELFQEMVSR-RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I Y II+ C + A +F
Sbjct: 492 IGI-----------------------------------YNIIIHGMCNASKVDDAWDLFC 516
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+ KG V Y+ M+ K G + +A L KM+ G PN YN L+ H
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEG 576
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
+ + KL +E++R + D + V+ + R
Sbjct: 577 DATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGR 611
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 111/286 (38%), Gaps = 11/286 (3%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAY--DYYNEAKKLPEFRPEKSTLKLL 123
EL+++ + PD + S + G K+ Q + + D P R T +L
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR----TFNIL 393
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG- 182
I ++ D + L + V+ D T + L+ K ++A L Q ++
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
++++ + G + ++EK++ + + LD G Y I+ +
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
LF S L Y I+ L K G EA FR M+E G + Y LI
Sbjct: 514 LFC---SLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIR 570
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
+ + + +L +E + G D +K+V+ + +G ++K+
Sbjct: 571 AHLGEGDATKSAKLIEEIKRCGFSVDAST-VKMVVDMLSDGRLKKS 615
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 192/465 (41%), Gaps = 47/465 (10%)
Query: 108 KKLPEF--RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
+KLP F P+ + +++ L +K+WD + L + P+ T + L+A R
Sbjct: 202 RKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRN 261
Query: 166 RKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
F+ + L G L + + + G K + + +M S G+ + CY
Sbjct: 262 GLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCY 321
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
+++ E+ L E + P + IL D ++G ++
Sbjct: 322 NTVLKGLCSAERWEEAEDLLAEMFQ---EDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 378
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M E G + D Y ++I F +EGL
Sbjct: 379 MLEHGCIPDVITYTTVINGFC-----------------------------------KEGL 403
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V++ + ++++M K + ++ G + + A ++ +I QGC+P VT+ +
Sbjct: 404 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNT 463
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+IN C+ L +A ++ +M G +++YS+++ GK G+ +A+ L+ M KG
Sbjct: 464 LINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKG 523
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
PN IY+S+ R ++ +++ ++ V D Y VIS+ + E D +
Sbjct: 524 ITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAI 583
Query: 525 KFYNEFRMNGGVIDRAIAGIMV-GVFSKLSQIEELVKLLQDMKSE 568
F+ NG + + + I++ G+ S E LV+ QD+ SE
Sbjct: 584 DFFAYMVSNGCMPNESTYTILIRGLAS-----EGLVREAQDLLSE 623
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 152/338 (44%), Gaps = 2/338 (0%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
MY + D + K G A M G+ + Y +++ S + AE+L E
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRR 378
++ D LV + + GLV++ ++++E M I D I+ ++NGF K
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGC-IPDVITYTTVINGFCKEG 402
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
AV + + + + GC P ++Y ++ CR + A+++ M Q+G V ++
Sbjct: 403 LVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFN 462
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ K G + A+ L+ +M GC P++ Y++++D G+A + +L M +
Sbjct: 463 TLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINK 522
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+TP+ + Y+++ SA +R D ++ ++ + D A+ ++ K + +
Sbjct: 523 GITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRA 582
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ M S G +E Y + L GL +AQ L
Sbjct: 583 IDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDL 620
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 150/334 (44%), Gaps = 10/334 (2%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P + + L L ++G + + M E G D +YA++I ++A +
Sbjct: 245 PPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAND 304
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLV-----EKTLDVVESMKNAKLKISDCISCAI 370
+ G L+ VC VL +GL E+ D++ M + D +
Sbjct: 305 ILSRMPSYG-LKPNVVCYNTVL----KGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNIL 359
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
V+ F + +++ EQ++ GCIP +TY ++IN +C+ L +A + M G
Sbjct: 360 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC 419
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
++Y+ ++ + R DA L++ M +GC PN +N+L++ + + Q +
Sbjct: 420 KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIE 479
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L K+M +PD +SY+TVI +A + + ++ N G + I M S
Sbjct: 480 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 539
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ + ++++++ ++ + D LY++ +++L
Sbjct: 540 REGRTDKIIQMFDSIQDATVRSDAALYNAVISSL 573
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 145/341 (42%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P + + Y + SL G +AL +M +G P + ++ + + A
Sbjct: 105 PPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVR 164
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ KG D C +V E+G V++ ++++ + + + A++ G
Sbjct: 165 ALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLC 224
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ + ++ +++ GC P T+ ++I CR L+ + + +M + G +
Sbjct: 225 MAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLR 284
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y++++ K G A ++++M + G +PNV YN+++ A+ + E L EM
Sbjct: 285 MYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 344
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ D V++ ++ + + D ++ + +G + D ++ F K +
Sbjct: 345 FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLV 404
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+E V LL++M + G K + Y + L A + AQ L
Sbjct: 405 DEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQEL 445
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/389 (19%), Positives = 163/389 (41%), Gaps = 7/389 (1%)
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
+ S + + + + G LDSG ++ A + G ++ L RKL S +
Sbjct: 159 FRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELL-----RKLPSFGCEPDI 213
Query: 262 --YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
Y + L + R + + +M G + + + +LI + E +
Sbjct: 214 VSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQ 273
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
E G D + ++ ++G E D++ M + LK + ++ G
Sbjct: 274 MPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAER 333
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A + ++ + C VT+ +++ +C+ L + ++ +M + G V+ Y++
Sbjct: 334 WEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTT 393
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ + K G + +A+ L+ M A GC+PN Y ++ RA+ ++L M ++
Sbjct: 394 VINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 453
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
P+ V++ T+I+ + + ++ + +NG D ++ K + EE +
Sbjct: 454 CLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 513
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+LL M ++G + +Y S +AL G
Sbjct: 514 ELLNVMINKGITPNTIIYSSMASALSREG 542
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/372 (19%), Positives = 153/372 (41%), Gaps = 52/372 (13%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEF--RPEKSTLKLLIRYLVQSKKWDS 135
PD + + + + G+ KD E+A D + ++P + +P +++ L +++W+
Sbjct: 281 PDLRMYATIIDGICKDGH-HEVANDILS---RMPSYGLKPNVVCYNTVLKGLCSAERWEE 336
Query: 136 IVSL-----SEDFKI----YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA- 185
L ED + +N+L D + LV + LL+ + G I
Sbjct: 337 AEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIE---------LLEQMLEHGCIPD 387
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ + + + G+ K + +++ + M S C C+ Y I L
Sbjct: 388 VITYTTVINGFCKEGLVDEAVMLLKNM--------SACGCKPNTISYTI-------VLKG 432
Query: 246 ECKS-RKLDSTPFSTHM-----------YKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
C++ R +D+ +HM + L + + K G +A++ + M G D
Sbjct: 433 LCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPD 492
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y+++I + + A EL KG+ + + + EG +K + + +
Sbjct: 493 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFD 552
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
S+++A ++ + A+++ KR A+ + ++S GC+P + TY +I
Sbjct: 553 SIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEG 612
Query: 414 LYSKAEKVFIEM 425
L +A+ + E+
Sbjct: 613 LVREAQDLLSEL 624
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 77/198 (38%), Gaps = 11/198 (5%)
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
G +++I + C + A + + G VVAY++M+A Y + G++ A L
Sbjct: 43 GSGRLSALIRSLCAAGRTADAARA---LDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLA 99
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
A + PN + Y ++ + + EM R ++ A R
Sbjct: 100 AAVPVP---PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRG 156
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
F V+ G +D ++V + ++E V+LL+ + S G + D Y
Sbjct: 157 GGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSY 216
Query: 578 HSAMNALRDAGLQMQAQW 595
++ + GL M +W
Sbjct: 217 NAVLK-----GLCMAKRW 229
>gi|410110059|gb|AFV61109.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia salsoloides]
Length = 433
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 165/351 (47%), Gaps = 7/351 (1%)
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 2 EMRDRALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 58
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ + A +F + G D + ++ + L + ++ M+ A + +
Sbjct: 59 KLCDYSKAISIFSRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTA 118
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++ + + + + A+ V+ +L C+ T +I+ Y ++ + +A+K+F M
Sbjct: 119 SYSTLLTMYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
++ G + VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G+
Sbjct: 179 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 238
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ + M
Sbjct: 239 EKANNLIQEMQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 298
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + + + +LL ++KS D +A++ L AG +A ++
Sbjct: 299 IVAYERAGLVAHAKRLLHELKSP----DNIPRDTAIHILAGAGRIEEATYV 345
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 166/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F+ + Y +
Sbjct: 36 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKRSGFTPDLVAYNAXIN 90
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +M+ G++ + + Y++L+ + + A +F E E L
Sbjct: 91 VFGKAKLFREARSLISEMRIAGVMPNTASYSTLLTMYVENKKFLEALSVFSELREMKCLL 150
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 151 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 210
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 211 RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQGRGIEPNSITYSTIISIWGKV 270
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + ++ +++ + RA + ++L E++ +PD +
Sbjct: 271 GKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELK----SPDNIPR 326
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + G V D + M+ +FSK + +V++ M+
Sbjct: 327 DTAIHILAGAGRIEEATYVFRRAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRG 386
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 387 LGYFPDSNVIALVLNA 402
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 108/221 (48%), Gaps = 9/221 (4%)
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++ + P + TY+++I + + L+ A +M+Q +V YS+++ + K
Sbjct: 1 DEMRDRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKL 60
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
A+ + +++K G P++ YN+ +++ G+AK R+ L EM V P+ SY
Sbjct: 61 CDYSKAISIFSRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASY 120
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+T+++ Y ++F + ++E R ++D IM+ V+ +L +E KL M+
Sbjct: 121 STLLTMYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180
Query: 568 EGTKLDERLYHSAMNALRDAGL---------QMQAQWLQQN 599
G + + Y++ + DA L MQ + ++QN
Sbjct: 181 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 221
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 161/353 (45%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M+ AG++ ++ Y ++ Y + + ++F
Sbjct: 82 LVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASYSTLLTMYVENKKFLEALSVFS 141
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 142 ELREMKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 196
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+ ++ +
Sbjct: 197 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQGRGIEPN 256
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G Q+ + ++I AY R L + A+++
Sbjct: 257 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLH 316
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+ K D + + + + GRI +A ++ + G ++ ++ ++ + + K
Sbjct: 317 EL--KSPDN--IPRDTAIHILAGAGRIEEATYVFRRAIDAGEVKDITVFERMIHLFSKYK 372
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + EFD Y E + G V
Sbjct: 373 KYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANSVYMEMQEVGCV 425
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 130/315 (41%), Gaps = 72/315 (22%)
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ-VTYASIINAYCR 411
+ M++ L ++ F K G + A + Q + Q +PG V Y+++I +
Sbjct: 1 DEMRDRALSPDRYTYSTLITHFGKE-GLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRK 59
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ YSKA +F +++ GF +VAY++ + ++GK R+A L+++M+ G PN
Sbjct: 60 LCDYSKAISIFSRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTAS 119
Query: 472 YNSLM-----------------------------------DMHGRAKNLRQVEKLWKEME 496
Y++L+ D++G+ ++ +KL+ M
Sbjct: 120 YSTLLTMYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 179
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKF---------------YNEFRM--------- 532
+ + P+ VSY T++ Y A F + YN M
Sbjct: 180 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 239
Query: 533 --NGGVIDRAIAGI---------MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
N + + GI ++ ++ K+ +++ L Q ++S G ++D+ L+ + +
Sbjct: 240 KANNLIQEMQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 299
Query: 582 NALRDAGLQMQAQWL 596
A AGL A+ L
Sbjct: 300 VAYERAGLVAHAKRL 314
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 140/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 115 PNTASYSTLLTMYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKL 174
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 175 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 234
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E + R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 235 TLEHEKANNLIQEMQGRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 291
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
++ ++I ++ V A+ L E L+ P+ + ++I G +E+ V
Sbjct: 292 QILFQTMIVAYERAGLVAHAKRLLHE------LKSPDNIPRDTAIHILAGAGRIEEATYV 345
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A ++NAY +
Sbjct: 346 FRRAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGK 405
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 406 LHEFDKANSVYMEMQEVG 423
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 190/485 (39%), Gaps = 71/485 (14%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA------- 165
F P +++R L S+ + + E ++ ++P T + ++ SC +A
Sbjct: 235 FLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVD 294
Query: 166 --------RKFKIA----NTLLQVFITDGE-----------------IALLAFNSAMGGY 196
R + + N L+ F G+ + +FN + GY
Sbjct: 295 KIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGY 354
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCY-------CQ----------------------- 226
K ++ V ++M +AGI + Y C+
Sbjct: 355 CKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAAPDVVSYN 414
Query: 227 -IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+M Y K+ + + LF + K+ ++ + + Y L D L +SG A + +M
Sbjct: 415 TLMHGYIKMRKFVEASLLFDDLKAGNINPSIVT---YNTLIDGLCESGNLEGAQRLKEEM 471
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+ I D Y +L+ F + +A E++ E KG+ D + + G
Sbjct: 472 TSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDS 531
Query: 346 EKTLDVVESMKNAKLKISD-CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
EK + E M D I ++G K A++ ++ G +P VTY +
Sbjct: 532 EKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTT 591
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+I Y + A ++ EM K V+ Y ++ + K GR+ A +MK +G
Sbjct: 592 VIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRG 651
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
PNV +N+L+ +A N+ + + +ME ++P+K SYT +IS + +++ V
Sbjct: 652 VRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVV 711
Query: 525 KFYNE 529
K Y E
Sbjct: 712 KLYKE 716
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 156/342 (45%), Gaps = 18/342 (5%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++++N+ M GY K+ + L+++ +K+ I Y +++ + G+ E L
Sbjct: 410 VVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKE 469
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E S+ + + Y L K+G A + + +M KGI D Y +
Sbjct: 470 EMTSQLIYPDVIT---YTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTT-----R 521
Query: 306 SITEVKL--AEELFKEAEEKGMLRDPEVCLKLVLMYIE-EGL-----VEKTLDVVESMKN 357
++ E++L +E+ F+ EE M+ + L + + +GL +EK ++ +
Sbjct: 522 TVGELRLGDSEKAFRLHEE--MVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFR 579
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
L ++ G+ ++ + A +Y++++S+ P +TY +I+ + + +
Sbjct: 580 VGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQ 639
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A + EM+++G V+ +++++ K G I +A + KM+ +G PN + Y L+
Sbjct: 640 AFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILIS 699
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
H +V KL+KEM +++ PD ++ + + E
Sbjct: 700 KHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHE 741
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/328 (18%), Positives = 141/328 (42%), Gaps = 5/328 (1%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ + DS K+G K + +MK + I Y LI F+ +++ A + +
Sbjct: 277 FNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQ 336
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
G P L+ Y ++GL ++ V + M NA + + + N + + +
Sbjct: 337 RSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGI----YPTTSTYNIYIRALCEF 392
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+ +L+S P V+Y ++++ Y ++ + +A +F +++ + +V Y++++
Sbjct: 393 GRIDDARELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLI 452
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
++G + A L +M ++ P+V Y +L+ + NL +++ EM R+ +
Sbjct: 453 DGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIK 512
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEF-RMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
PD +YTT R + + + + E + D I + + K+ +E+ ++
Sbjct: 513 PDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIE 572
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ + G D Y + + + G
Sbjct: 573 FQRKIFRVGLVPDHVTYTTVIRGYLEKG 600
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 67/127 (52%)
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
Y + ++ K F +M +KGF V + ++ + + + A + M G P
Sbjct: 213 VYTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMP 272
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
V +N+++D +A +L +V+K+W EM+RR + +V+Y +I+ ++++ + + +F+
Sbjct: 273 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFH 332
Query: 528 NEFRMNG 534
+ + +G
Sbjct: 333 GDMQRSG 339
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 111/262 (42%), Gaps = 6/262 (2%)
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV-NGFSKRRGYWAAVKVYEQLISQGCI 396
+Y ++ + EK L E M + +C IV R A +VYE ++ G +
Sbjct: 213 VYTKKSMAEKCLLSFEKMIRKGF-LPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIM 271
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P +T+ +++++ + + +K+++EM+++ + V Y+ ++ + K+G++ +A
Sbjct: 272 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRF 331
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
M+ G + +N L++ + + + + EM + P +Y I A
Sbjct: 332 HGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCE 391
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
D E + D ++ + K+ + E L D+K+
Sbjct: 392 FGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVT 447
Query: 577 YHSAMNALRDAGLQMQAQWLQQ 598
Y++ ++ L ++G AQ L++
Sbjct: 448 YNTLIDGLCESGNLEGAQRLKE 469
>gi|255661154|gb|ACU25746.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 426
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 159/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYXKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ ++ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSXGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 151/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYXKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G+ + L+ MY+E + L + M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSXGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 162/353 (45%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG+ ++ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSXGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ +A + + GRI +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + EFD Y E + G V
Sbjct: 370 KYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYXKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 142/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSXGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDIAIHILAGAGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A ++NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANDVYMEMQEVG 420
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSXGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 119/239 (49%)
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+VE M ++ + ++N + R A+K +E++ S+G +P +VTY S+I+ Y
Sbjct: 165 LVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYG 224
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
R+ ++A +++ +++ + V Y ++ +Y + G + M LV +M+ G PN
Sbjct: 225 RVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAV 284
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
I N+LM +A + Q +K++ EM V+P V+ + ++ Y R +D + Y
Sbjct: 285 IMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETL 344
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ G D A+ ++ + ++E+ +L++MK G D Y +AMN G+
Sbjct: 345 KTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGM 403
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 160/353 (45%), Gaps = 4/353 (1%)
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFE-ALKFFRD 284
I+ I EK A F K+R + + + Y ++ L ++GR E + K +
Sbjct: 111 NIVTVLNNINRWEKALAFFEWLKARP-ELYEINRYTYNVMLKIL-RNGRQLELSEKLVEE 168
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M +GI D +++LI + + A + F+ + +G++ D ++ MY G
Sbjct: 169 MTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGR 228
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V + +++ E +K+ K+ AI N +++ Y + +++ +++ G P V +
Sbjct: 229 VNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNT 288
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
++ + ++A+KVF EM+ G V S +V MY + G A + +K +G
Sbjct: 289 LMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEG 348
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+ +V +YNSLM + Q E + KEM+R PD ++Y T ++ Y D
Sbjct: 349 WKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPAR 408
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG-TKLDERL 576
+ +++ G D + +M+ +IE+ K+ +M G DER+
Sbjct: 409 RMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPDERV 461
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 113/210 (53%)
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
K+ E++ +G P T++++IN R +A K F M+ +G V Y+S++ MY
Sbjct: 164 KLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMY 223
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
G+ GR+ +A+ L K+K+ + + Y ++ +++ RA + + + +L +EM +P+
Sbjct: 224 GRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNA 283
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
V T++ ++A + + K +NE R +G I+V +++++ ++ ++ +
Sbjct: 284 VIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYET 343
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+K+EG K D +Y+S M A + G QA+
Sbjct: 344 LKTEGWKCDVAVYNSLMKACVEGGRVEQAE 373
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 153/335 (45%), Gaps = 7/335 (2%)
Query: 98 ELAYDYYNEAKKLPE-FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCS 156
E A ++ K PE + + T ++++ L ++ + L E+ + PD +T S
Sbjct: 123 EKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFS 182
Query: 157 RLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSA 215
L+ R R+ + A + ++G + + +NS + Y ++ + +YEK+KS
Sbjct: 183 TLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSV 242
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
LD+ Y I Y + GD + + L E R S+P + M L +L K+G+
Sbjct: 243 NWKLDTVTYGAIANVYARAGDYQSIMQLVQEM--RDSGSSPNAVIM-NTLMGTLSKAGKV 299
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
+A K F +M+ G+ P + L+ + + A E+++ + +G D V L
Sbjct: 300 NQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSL 359
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ +E G VE+ D+++ MK A +N ++ + A ++++++++
Sbjct: 360 MKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNG 419
Query: 396 IPGQVTYASIINAYCRIA-LYSKAEKVFIEMQQKG 429
P + +I A C++A +A K+F EM + G
Sbjct: 420 KPDTPLFTVMIRA-CKLAGEIEQASKIFDEMMESG 453
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG--CEPNVWIYNSLMDMHG 480
+E + +DK + A ++V + R A+ +KA+ E N + YN ++ +
Sbjct: 96 VEAALESWDKSLSA-KNIVTVLNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKILR 154
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+ L EKL +EM R + PD +++T+I+ R R+ + +K++ + G V D
Sbjct: 155 NGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEV 214
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
++ ++ ++ ++ E V+L + +KS KLD Y + N AG
Sbjct: 215 TYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAG 262
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 139/266 (52%), Gaps = 6/266 (2%)
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
MK++ + I+ S+ + + A +F + E + + L ++ + +EE
Sbjct: 76 MKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENH 135
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPGQVTYA 403
V++ + M+ + S ++ K + +A+++++++ ++GC P TY
Sbjct: 136 VKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYG 195
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
++IN CR+ S+A+++F EM+QKGF VV Y+S++ ++ + +A+ L+ +MK
Sbjct: 196 TLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRN 255
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
EPNV+ Y+SLMD + + Q +L + M+++ P+ V+Y+T+I+ + R+
Sbjct: 256 DIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREA 315
Query: 524 VKFYNEFRMNG-----GVIDRAIAGI 544
V+ + R+ G G+ + I+G+
Sbjct: 316 VEILDRMRIQGLKPNAGLYGKIISGL 341
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/466 (19%), Positives = 195/466 (41%), Gaps = 56/466 (12%)
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVY 209
D T +++ V +F+ A +L+ + + F S GY ++H I V+
Sbjct: 49 DHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVF 108
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
KM+ + Y I++ + ++ + E + + S+ S + IL +L
Sbjct: 109 HKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLN---ILIKAL 165
Query: 270 GKSGRAFE-ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
K+ + AL+ F++M +G D Y +LI + + A+ELFKE E+KG
Sbjct: 166 CKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSAS 225
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
V+ Y ++++G + A+ + E
Sbjct: 226 -------VVTYT----------------------------SLIHGLCQSNNLDEAIGLLE 250
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ P TY+S+++ C+ S+A ++ M +K +V YS+++ K
Sbjct: 251 EMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKER 310
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
++R+A+ ++ +M+ +G +PN +Y ++ A + ++ EM ++P++ S++
Sbjct: 311 KLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWS 370
Query: 509 TVISAYNRAREFDMC--------VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
+ +N + +C + Y R ++ +V F K + + +
Sbjct: 371 LHVRMHNMVVQ-GLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAAR 429
Query: 561 LLQDMKSEGTKLDERLYHSAMNAL------RDAGLQMQAQWLQQNF 600
+L++M +G DE +++ + L R+A Q+ + LQQ F
Sbjct: 430 ILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQLLVE-LQQKF 474
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 73/174 (41%), Gaps = 1/174 (0%)
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
GF + +++ + R A ++ +MK + C I+ S+ +GR
Sbjct: 45 GFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDA 104
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+++ +ME ++ P + +Y T++ + FY E R G I++
Sbjct: 105 IRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKA 164
Query: 549 FSKLSQ-IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
K + ++ +++ Q+M + G + D Y + +N L G +A+ L + E
Sbjct: 165 LCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEME 218
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 111/495 (22%), Positives = 211/495 (42%), Gaps = 14/495 (2%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
V +A ++ +H +LK E A + Y L FRP T L+ L + + DS+
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTE-AMEVYRRMI-LEGFRPSLQTYSSLMVGLGKRRDIDSV 242
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG----EIALLAFNSA 192
+ L ++ + + P+ +T + + RA K A +L+ +G + A
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ KL V+EKMK+ D Y +++ + D + V + E +
Sbjct: 303 LCTARKLDCAKE---VFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK--- 356
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D + IL D+L K+G EA M+++GIL + Y +LIC + +
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC-AIV 371
A ELF E G+ + + Y + G L+ E MK + + ++C A +
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA-PNIVACNASL 475
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+K A +++ L G +P VTY ++ Y ++ +A K+ EM + G +
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
V+ +S++ K R+ +A + +MK +P V YN+L+ G+ +++ +L
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
++ M ++ P+ +++ T+ + E + +K + G V D ++ K
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655
Query: 552 LSQIEELVKLLQDMK 566
Q++E + MK
Sbjct: 656 NGQVKEAMCFFHQMK 670
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 169/399 (42%), Gaps = 14/399 (3%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY +M G Y +M K D + V L E ++ L ++ + I
Sbjct: 210 VYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYT---FTICIR 266
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
LG++G+ EA + + M ++G D Y LI + + ++ A+E+F++ +
Sbjct: 267 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK---ISDCISCAI-VNGFSKRRGYWAA 383
D + L+ + + + LD V+ + K + D ++ I V+ K + A
Sbjct: 327 DRVTYITLLDRFSDN----RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA 382
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+ + QG +P TY ++I R+ A ++F M+ G Y +
Sbjct: 383 FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
YGK+G A+ KMK KG PN+ N+ + +A R+ ++++ ++ + PD
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
V+Y ++ Y++ E D +K +E NG D + ++ K +++E K+
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFEG 602
MK K Y++ + L G +A L FEG
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL---FEG 598
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 186/470 (39%), Gaps = 72/470 (15%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKL--PEF--------------------- 113
VPD +++ + G++K+ Q +E A ++++ KKL P+F
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKE-AMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYK 698
Query: 114 -----------RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTC-SRLVAS 161
+P + LI ++ D+ VS SE + D + ++
Sbjct: 699 IITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 758
Query: 162 CVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVL 219
+ A TL + F D + L +N +GG + M V+ ++KS G +
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM------------------ 261
D Y +++AY K G +++ L+ E + + ++ + ++
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 262 ---------------YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
Y L D L KSGR +EA + F M + G + +IY LI F
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
E A LFK ++G+ D + LV G V++ L + +K + L
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQL-ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
I+NG K A+ ++ ++ S+G P TY S+I + +A K++ E+
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
Q+ G + V +++++ Y +G+ A + M G PN Y L
Sbjct: 1059 QRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 112/531 (21%), Positives = 218/531 (41%), Gaps = 30/531 (5%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +S ++ + K + E A+ + K++ + +P T L+ L ++ K +
Sbjct: 536 PDVIVVNSLINTLYKADRVDE-AWKMFMRMKEM-KLKPTVVTYNTLLAGLGKNGKIQEAI 593
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
L E P+ T + L + + +A +L + G + + +N+ + G
Sbjct: 594 ELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK---IGDSEKVAALFL-ECKSRKL 252
K + + +MK + D C ++ K I D+ K+ FL C +
Sbjct: 654 VKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQ-- 710
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED-PSIYASLICSFASITEVK 311
P + ++ L ++G A+ F + GI D SI +I V
Sbjct: 711 ---PANLFWEDLIGSILAEAGID-NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVS 766
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI--SDCISCA 369
A LF E K + P++ +L+ GL+E D++E ++ L++ + CI
Sbjct: 767 GARTLF-EKFTKDLGVQPKLPTYNLLI---GGLLEA--DMIEIAQDVFLQVKSTGCIPDV 820
Query: 370 -----IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++ + K ++Y+++ + C +T+ +I+ + A ++ +
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 425 -MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M + F Y ++ K+GR+ +A L M GC PN IYN L++ G+A
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
L+K M + V PD +Y+ ++ D + ++ E + +G D
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 544 IMVGVFSKLSQIEELVKLLQDMK-SEGTKLDERLYHSAMNALRDAGLQMQA 593
+++ K ++EE + L +MK S G D Y+S + L AG+ +A
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 110/247 (44%)
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
+G +E+ V + M+ +K I S + G A ++ G + +
Sbjct: 131 DGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYS 190
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y +I+ + ++A +V+ M +GF + YSS++ GK I M L+ +M+
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
G +PNV+ + + + GRA + + ++ K M+ PD V+YT +I A AR+ D
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ + + + DR ++ FS ++ + + +M+ +G D + +
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 582 NALRDAG 588
+AL AG
Sbjct: 371 DALCKAG 377
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 137/326 (42%), Gaps = 7/326 (2%)
Query: 85 SFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFK 144
+ L G L + E+A D + + K P+ +T L+ +S K D + L ++
Sbjct: 789 NLLIGGLLEADMIEIAQDVFLQVKSTGCI-PDVATYNFLLDAYGKSGKIDELFELYKEMS 847
Query: 145 IYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA--FNSAMGGYNKLHMY 202
+ + T + +++ V+A A L ++D + + A + + G +K
Sbjct: 848 THECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRL 907
Query: 203 YSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMY 262
Y ++E M G + Y ++ + K G+++ ALF K + Y
Sbjct: 908 YEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALF---KRMVKEGVRPDLKTY 964
Query: 263 KILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE- 321
+L D L GR E L +F+++KE G+ D Y +I ++ A LF E +
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+G+ D L+L G+VE+ + ++ A L+ + A++ G+S
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1084
Query: 382 AAVKVYEQLISQGCIPGQVTYASIIN 407
A VY+ +++ G P TY + N
Sbjct: 1085 HAYAVYQTMVTGGFSPNTGTYEQLPN 1110
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 190/456 (41%), Gaps = 48/456 (10%)
Query: 155 CSRLVASCVRARKFKIA-----NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVY 209
C+ L+++ VR +K + A N L + D + +++ + G+ K + +
Sbjct: 1 CNCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDS----ITYSTLINGFCKARDFQQAYRLL 56
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
++M+ GIV + Y I++ + D+ +V + + + + P S Y IL D+L
Sbjct: 57 DEMEKRGIVPHNAVYNTIIKG---LCDNGRVDSALVHYRDMQRHCAP-SVITYTILVDAL 112
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
KS R +A DM E G + Y +LI F + + A LF + E D
Sbjct: 113 CKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDV 172
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
L+ Y ++ + +++ M + + +++ K Y A + +
Sbjct: 173 FTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQM 232
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
++ + C P T+ +I+ +C++ A ++F M +G + Y+ M++ + R
Sbjct: 233 MLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANR 292
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNS----------------------------------- 474
I DA L+ +M GC P+V YNS
Sbjct: 293 IDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCST 352
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L+D +++ L EKL +EMER PD V+YT +I + +A + D + F++E G
Sbjct: 353 LIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG 412
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
V I++ K +++ + LL+ M G
Sbjct: 413 CVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 5/313 (1%)
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
+A EA F++ D Y++LI F + + A L E E++G++ V
Sbjct: 13 KAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYN 72
Query: 334 KLVLMYIEEGLVEKTLDVVESMKN--AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
++ + G V+ L M+ A I+ I +V+ K A + E +I
Sbjct: 73 TIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTI---LVDALCKSARISDASLILEDMI 129
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
GC P VTY ++IN +C++ +A +F +M + V Y+ ++ Y K R +
Sbjct: 130 EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQ 189
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
D L+ +M GCEPN YN+LMD ++ L + M RR P ++ +I
Sbjct: 190 DGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMI 249
Query: 512 SAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+ + + D+ + + G + D IM+ + ++I++ +LL+ M G
Sbjct: 250 DMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCP 309
Query: 572 LDERLYHSAMNAL 584
D Y+S ++ L
Sbjct: 310 PDVVTYNSIVSGL 322
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 186/425 (43%), Gaps = 9/425 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD+ + + ++G K Q+ AY +E +K P + +I+ L + + DS +
Sbjct: 31 PDSITYSTLINGFCKARDFQQ-AYRLLDEMEK-RGIVPHNAVYNTIIKGLCDNGRVDSAL 88
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
D + + P T + LV + ++ + A+ +L+ I G ++ +N+ + G+
Sbjct: 89 VHYRDMQ-RHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGF 147
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
KL ++++ +M D Y +++ Y K + A L E K P
Sbjct: 148 CKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQE--MVKYGCEP 205
Query: 257 -FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
F T Y L DSL KSG+ +A + M + + +I F + ++ LA E
Sbjct: 206 NFIT--YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYE 263
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
LF+ ++G L D ++ ++ ++E M A +IV+G
Sbjct: 264 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 323
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A +VYE L + G VT +++I+ C+ AEK+ EM++ G VV
Sbjct: 324 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 383
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
AY+ ++ + K ++ ++ ++M KGC P V Y+ ++D ++ +R L K M
Sbjct: 384 AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 443
Query: 496 ERRKV 500
R V
Sbjct: 444 LERGV 448
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 112/230 (48%), Gaps = 1/230 (0%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++ F +++ A +++ + C P +TY+++IN +C+ + +A ++ EM+++
Sbjct: 3 CLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKR 62
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G Y++++ GR+ A+ M+ + C P+V Y L+D ++ +
Sbjct: 63 GIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARISDA 121
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+ ++M P+ V+Y T+I+ + + D V +N+ N D I++
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+ K + ++ KLLQ+M G + + Y++ M++L +G + A L Q
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQ 231
>gi|449459510|ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 181/382 (47%), Gaps = 10/382 (2%)
Query: 223 CYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFF 282
Y ++ + E LF E + R L + ++ Y L GK G AL +
Sbjct: 161 AYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYT---YSTLITYFGKEGMFDAALSWL 217
Query: 283 RDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
+ M++ + D +Y++LI + + A +F + G+ D ++ ++ +
Sbjct: 218 QKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKA 277
Query: 343 GLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
L + +++ M+ + + D +S ++N F + + A+ V ++ C T
Sbjct: 278 KLFREARFLLKEMRAVDV-MPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTT 336
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+I+ Y ++ + +A+++F M++ G + VV+Y++++ +YG+ +A+ L M+
Sbjct: 337 CNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 396
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
K + NV YN+++ ++G+ + L ++M++R + P+ ++Y+T+IS + +A + D
Sbjct: 397 RKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLD 456
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ + R +G ID+ + M+ + K + +LL ++K D +A+
Sbjct: 457 RSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQP----DNIPRTTAI 512
Query: 582 NALRDAGLQMQAQWL-QQNFEG 602
L AG +A W+ +Q F+
Sbjct: 513 TILAKAGRIEEATWVFRQAFDA 534
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/497 (19%), Positives = 209/497 (42%), Gaps = 53/497 (10%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
+ P +++R ++++K+W+ L ++ + + D +T S L+ + F A
Sbjct: 155 YTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAAL 214
Query: 173 TLLQVFITD---GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
+ LQ D G++ L +++ + KL Y I ++ ++K +GI D Y ++
Sbjct: 215 SWLQKMEQDRVSGDLVL--YSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMIN 272
Query: 230 AYYKIGDSEKVAALFLECK-----SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
+ K A LF E + R +D P T Y L + ++ + EAL +
Sbjct: 273 VFGK-------AKLFREARFLLKEMRAVDVMP-DTVSYSTLLNMFVENEKFLEALSVISE 324
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL--KLVLMYIEE 342
MKE D + +I + + VK A+ LF + G+ +P V ++ +Y E
Sbjct: 325 MKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGI--EPNVVSYNTILRVYGEA 382
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
L + + + M+ ++K + ++ + K + A + + + +G P +TY
Sbjct: 383 ELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITY 442
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY------------------ 444
++II+ + + ++ +F +++ G + V Y +M+ Y
Sbjct: 443 STIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQ 502
Query: 445 -------------GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
K GRI +A W+ + G ++ ++ ++D+ R K + V ++
Sbjct: 503 PDNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEV 562
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+++M P+ V++AY + R+FD Y E + G V + M+ ++
Sbjct: 563 FEKMRNVGHFPNSDVIALVLNAYGKLRDFDTADALYMEMQEEGCVFTDEVHFQMLSLYGA 622
Query: 552 LSQIEELVKLLQDMKSE 568
+ + L L + + S+
Sbjct: 623 RNDYKRLESLFERLDSD 639
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 82/177 (46%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P Y ++ R + A +F EM+Q+ YS+++ +GK G A+
Sbjct: 157 PSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSW 216
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ KM+ ++ +Y++L+++ + + + ++ ++R +TPD V+Y T+I+ + +
Sbjct: 217 LQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGK 276
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
A+ F E R + D ++ +F + + E + ++ +MK LD
Sbjct: 277 AKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLD 333
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 61/130 (46%)
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+V+ YN ++ RAK L+ EM +R + D+ +Y+T+I+ + + FD + +
Sbjct: 157 PSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSW 216
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ + D + ++ + KL + + + +K G D Y++ +N
Sbjct: 217 LQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGK 276
Query: 587 AGLQMQAQWL 596
A L +A++L
Sbjct: 277 AKLFREARFL 286
>gi|14488297|gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza sativa]
gi|222612440|gb|EEE50572.1| hypothetical protein OsJ_30721 [Oryza sativa Japonica Group]
Length = 854
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 209/476 (43%), Gaps = 14/476 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ + +L++ + + +L ++ ++ P T + L+ R + A L
Sbjct: 259 PDACSYNILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARML 318
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ G E+ + FN + GY K + + +MK+ G++ D + + YK
Sbjct: 319 FDEMLQAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYK 378
Query: 234 IGDSEKVAALFL--ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
G AALF+ + + ++ + ST +L L GR +A + EKG+
Sbjct: 379 FGK----AALFVLDQQQLHEMFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQ 434
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
S + +LI +++ + A EL+K + G+ L++ G +++
Sbjct: 435 VSVSGFNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLF 494
Query: 352 VESMKNAKLKISDCI--SCAIVNGFSKRRG-YWAAVKVYEQLISQGCIPGQVTYASIINA 408
+E M +++ C+ S I S R G A+K ++ + G P V +++ +N
Sbjct: 495 LEYM----VRMGYCVIASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNG 550
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
CR+ +A FIEM ++G Y+S+++ + + G + +A+ L KM+ G P+
Sbjct: 551 LCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPD 610
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
++ N L+D R L L+ M +TPD V+Y T+++AY R+++ + + F N
Sbjct: 611 IFTRNILIDGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMN 670
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ +G D I + + + LL ++ + + Y++ M+ +
Sbjct: 671 KMLADGCEPDIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTLMDGI 726
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%)
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
EV+ A ++F+E +G + + ++ GLV + ++ M + C
Sbjct: 206 EVRAAWKVFEEMAARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYN 265
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++ G A +++++ GC P VTY ++N CR +A +F EM Q
Sbjct: 266 ILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQA 325
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
G + + ++ ++ Y K G++ +A A+MKA G P+ +N L
Sbjct: 326 GVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNIL 372
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 396 IPGQVTYASIINAYCRIALYSKAE---KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
+P +Y ++ +C LY +AE +F EM+ G +V Y+ ++ + GR+ +
Sbjct: 258 VPDACSYNILMKGHC---LYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVE 314
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A L +M G E N +N L+D + +A + EM+ + PD ++ ++S
Sbjct: 315 ARMLFDEMLQAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTF-NILS 373
Query: 513 A 513
A
Sbjct: 374 A 374
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 135/341 (39%), Gaps = 8/341 (2%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y IL G+A +A F +M+ G Y L+ + A LF E
Sbjct: 264 YNILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEML 323
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+ G+ + L+ Y + G +E MK L + DC + I++ + + G
Sbjct: 324 QAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGL-MPDCCTFNILSAGAYKFGK- 381
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK---AEKVFIEMQQKGFDKCVVAYS 438
AA+ V +Q Q++ I CR+ + A ++ +KG V ++
Sbjct: 382 AALFVLDQQQLHEMFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFN 441
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL-MDMHGRAKNLRQVEKLWKEMER 497
+++A Y K G +A L M G P+ N L M + R + L Q +L+ E
Sbjct: 442 ALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGR-LDQA-RLFLEYMV 499
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
R S+T + + RA + +K +++ ++ G D V +L ++E
Sbjct: 500 RMGYCVIASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDE 559
Query: 558 LVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+M G + Y+S ++A AG +A L+Q
Sbjct: 560 AYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQ 600
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 93/224 (41%), Gaps = 19/224 (8%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
A GF R G +AA ++ ++A+ + +A V +++
Sbjct: 144 AFCEGFRGRSGRYAARRL------------------ALHAFLAAGMADEALDVLARVRRA 185
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G + A ++++ + + G +R A + +M A+G PN+ I+N+++ +R
Sbjct: 186 GDTPSLSALAALLRLLFRGGEVRAAWKVFEEMAARGPRPNLAIFNAMIFGLCHRGLVRVS 245
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
L M R V PD SY ++ + + + ++E R+ G I++
Sbjct: 246 GGLLGVMGRFHVVPDACSYNILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNE 305
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
+ ++ E L +M G +++ ++ ++ AG QM+
Sbjct: 306 LCREGRMVEARMLFDEMLQAGVEVNTITFNVLIDGYAKAG-QME 348
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 61/156 (39%)
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A KVF EM +G + +++M+ G +R + L+ M P+ YN LM
Sbjct: 210 AWKVFEEMAARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYNILMK 269
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
H L+ EM P V+Y +++ R ++E G +
Sbjct: 270 GHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAGVEV 329
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ +++ ++K Q+E +MK+ G D
Sbjct: 330 NTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPD 365
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/485 (20%), Positives = 207/485 (42%), Gaps = 8/485 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ LV+SK + +++SL + + + P+ + L+ + A ++
Sbjct: 68 PPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSV 127
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L + G E + N+ + G+ + + ++K+ + G LD Y ++ K
Sbjct: 128 LAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCK 187
Query: 234 IGDSEKVAALFLECKSRKLDS--TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+G++ L R++D MY + DS+ K +A + +M + I
Sbjct: 188 VGETRAALELL-----RRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRIS 242
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y++LI F + ++K A LF + + + D LV + +EG V++ +
Sbjct: 243 SNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNG 302
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+ M +K ++++G+ A + + +G +Y +IN +C+
Sbjct: 303 LAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCK 362
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
I + +A K+F EM K V+ Y+S++ K+GRI A+ L+ M +G +P++
Sbjct: 363 IKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIIT 422
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
Y+S++D + + + L +++ + + P+ +YT +I + + + +
Sbjct: 423 YSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLL 482
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
+ G + +M+ F +E + LL MK D Y + +L D
Sbjct: 483 VKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDEND 542
Query: 592 QAQWL 596
+A+ L
Sbjct: 543 KAEKL 547
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 159/359 (44%), Gaps = 3/359 (0%)
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
++ D +LF C R+ + TP +IL SL KS L F+ M+ +G
Sbjct: 44 TFHNNNDVVDAVSLF-NCLLRQ-NPTPPDMEFGQIL-GSLVKSKHYHTVLSLFQKMEYRG 100
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
I + + LI F + + A + + + G D + + +G + + L
Sbjct: 101 IKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQAL 160
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+ + + + ++NG K AA+++ ++ + V Y++II++
Sbjct: 161 NFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSM 220
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ + A ++ EM + +V YS++++ + G+++DA+ L KM ++ P+V
Sbjct: 221 CKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDV 280
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
+ +N L+D + +++ + M ++ + PD V+Y +++ Y E +M N
Sbjct: 281 YTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNT 340
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G I++ F K+ +++ +KL ++M + + Y+S ++ L +G
Sbjct: 341 MSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSG 399
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 141/354 (39%), Gaps = 29/354 (8%)
Query: 121 KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
++I + K D + L ++ + P+ T + L+ ++ + A L+ +
Sbjct: 354 NIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHD 413
Query: 181 DGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
G+ ++ ++S + K H+ I + K+K GI + Y +++ K G E
Sbjct: 414 RGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLED 473
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
+F + + + T + Y ++ G EAL MK+ + D Y
Sbjct: 474 ARNIFEDLLVKGYNLT---VNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEI 530
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
+ICS E AE+L +E +G+L ++E G +L + + A
Sbjct: 531 IICSLFDKDENDKAEKLLREMITRGLLYS----------FLEYG--SWSLSFMAA--PAH 576
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+D + C S+ G WA K+ + I C+ + + +YS +
Sbjct: 577 FLNNDSLQCTS----SQESGNWA--KLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCD 630
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
++G+ V Y+ M+ + G +++ L++KM+ GC P+ Y+
Sbjct: 631 -----WSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 174/377 (46%), Gaps = 16/377 (4%)
Query: 158 LVASCVRARKFKIANTLLQVFITDG---EIALLAF-NSAMGGYNKLHMYYSTILVYEKMK 213
L S +A +A + + +DG LL F S+ KLH + +L +++
Sbjct: 109 LTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVE 168
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
+V++S ++ K+ E LF E + S T + IL L G
Sbjct: 169 GCCMVVNS-----LLNTLVKLDRVEDAMKLFDE--HLRFQSCN-DTKTFNILIRGLCGVG 220
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
+A +AL+ M G D Y +LI F E+ A E+FK+ + G + P+V
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPDVVT 279
Query: 334 --KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
++ Y + G + + +++ M + ++ +V+G++K A ++ ++I
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
S GC P VT+ S+I+ YCR+ S+ +++ EM +G YS ++ R+
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
A L+ ++ +K P ++YN ++D +A + + + +EME++K PDK+++T +I
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 512 SAY-NRAREFDMCVKFY 527
+ + R F+ F+
Sbjct: 460 IGHCMKGRMFEAVSIFH 476
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 178/416 (42%), Gaps = 35/416 (8%)
Query: 204 STILVYEKMKSAGIVLDSG-CYCQI---------MEAYYKIGDSEKVAALFLECKSRKLD 253
ST+ VY V DS C+C + E K+ ++ + F E KL+
Sbjct: 46 STLFVYR-------VPDSDLCFCYLSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLN 98
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
S Y +L SL K+G A + F MK G+ + + L+ SFA ++ A
Sbjct: 99 -IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE-SMK--NAKLKISDCISCAI 370
L ++ E E C +V+ + LV+ LD VE +MK + L+ C
Sbjct: 158 TALLLQSFEV------EGCC-MVVNSLLNTLVK--LDRVEDAMKLFDEHLRFQSCNDTKT 208
Query: 371 VN----GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
N G A+++ + GC P VTY ++I +C+ +KA ++F +++
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 427 QKGF-DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
VV Y+SM++ Y K G++R+A L+ M G P +N L+D + +A +
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
E++ +M PD V++T++I Y R + + + E G + I+
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ +++ + +LL + S+ +Y+ ++ AG +A + + E
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
>gi|255661212|gb|ACU25775.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 426
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 164/338 (48%), Gaps = 6/338 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G +AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRR 378
+ G++ D ++ ++ + L + ++ M+ + + D +S ++ + + +
Sbjct: 70 LKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGV-VPDTVSYSTLLTMYVENQ 128
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y+
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPNVVSYN 188
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++ +YG +A+ L M+ K E NV YN++M ++G+ + L +EM R
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHSR 248
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ P+ ++Y+T+IS + + + D + + R +G ID + M+ + + +
Sbjct: 249 GIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHA 308
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D +A++ L AG +A W+
Sbjct: 309 KRLLHELK----RPDNIPRDTAIHILAGAGRIEEATWV 342
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 154/363 (42%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K GI+ D Y S+I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLYDYSKAISIFSRLKRSGIVPDLVAYNSMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-V 371
A L E G++ D L+ MY+E + L V M+ K + D +C I +
Sbjct: 98 ARSLISEMRMVGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKC-LLDLTTCNIMI 156
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ + + A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLDMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y++M+ +YGKT A L+ +M ++G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNTMMMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN------------------ 533
++++ V D V Y T+I AY RA + +E +
Sbjct: 277 FQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRI 336
Query: 534 -------------GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
G V D + MV +FSK + +V++ + M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMVDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 107/216 (49%), Gaps = 9/216 (4%)
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
+G P + TY+++I + + L+ A +M+Q +V YS+++ + K
Sbjct: 3 RGLSPXRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDYSK 62
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A+ + +++K G P++ YNS++++ G+AK R+ L EM V PD VSY+T+++
Sbjct: 63 AISIFSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTLLT 122
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
Y ++F + + E R ++D IM+ V+ +L +E KL M+ G +
Sbjct: 123 MYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEP 182
Query: 573 DERLYHSAMNALRDAGL---------QMQAQWLQQN 599
+ Y++ + DA L MQ + ++QN
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 185/425 (43%), Gaps = 12/425 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + T LI + + +D +S + + V D S L+ + + A ++
Sbjct: 7 PXRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDYSKAISI 66
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G + L+A+NS + + K ++ + +M+ G+V D+ Y ++ Y +
Sbjct: 67 FSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTLLTMYVE 126
Query: 234 IGDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ ++F E + K LD T + I+ D G+ A EA K F M++ GI
Sbjct: 127 NQKFLEALSVFAEMREIKCLLDLTTCN-----IMIDVYGQLDMAKEADKLFWSMRKMGIE 181
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y +L+ + A LF+ + K + ++ ++++Y + EK ++
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNL 241
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++ M + ++ + I++ + K A ++++L S G V Y ++I AY R
Sbjct: 242 IQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYER 301
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
L + A+++ E+++ + + + + GRI +A W+ + G ++ +
Sbjct: 302 AGLVAHAKRLLHELKRPD----NIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+ ++D+ + K V +++++M PD V++AY + EFD Y E +
Sbjct: 358 FERMVDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYLEMQ 417
Query: 532 MNGGV 536
G V
Sbjct: 418 DEGCV 422
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 74/148 (50%)
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
+++G YS+++ +GK G DA+ + KM+ ++ +Y++L+++ + +
Sbjct: 1 RERGLSPXRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDY 60
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ ++ ++R + PD V+Y ++I+ + +A+ F +E RM G V D +
Sbjct: 61 SKAISIFSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTL 120
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ ++ + + E + + +M+ LD
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCLLD 148
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 88/195 (45%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q + G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P T ++ L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIPRDTAIH-----ILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ ++ F+ + E+F++ G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMVDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M++ SD
Sbjct: 411 DVYLEMQDEGCVFSD 425
>gi|255661218|gb|ACU25778.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 426
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 163/337 (48%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK GR +AL + + M+E + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGRFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G+ D ++ ++ + L ++ ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGITPDLVAYNSMINVFGKAKLFKEARSLIGEMRTAGVMPNTISYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C +T +I+ Y ++ + +A+K+F ++ + VV+Y++
Sbjct: 130 FIEALSVFAEMREIQCSLDLITCNIMIDVYGQLGMAKEADKLFWGXRKMEIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YN++M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNTITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIITYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D +A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDTAIHILAGAGRIEEATWV 342
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 153/370 (41%), Gaps = 47/370 (12%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K GI D Y S+I F K
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G++ + L+ MY+E + L V M+ + + D I+C I+
Sbjct: 98 ARSLIGEMRTAGVMPNTISYSTLLTMYVENKKFIEALSVFAEMREIQCSL-DLITCNIMI 156
Query: 373 GFSKRRG--------YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+ G +W K+ + P V+Y +++ Y L+ +A +F
Sbjct: 157 DVYGQLGMAKEADKLFWGXRKMEIE-------PNVVSYNTLLRVYGDAELFGEAIHLFRL 209
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
MQ+K ++ VV Y++M+ +YGKT A L+ +M+ +G EPN Y++++ + G+
Sbjct: 210 MQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNTITYSTIISIWGKVGK 269
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE--------------- 529
L + L++++ + D+V Y T+I Y RA + +E
Sbjct: 270 LDRAAMLFQKLRSSGIEIDQVLYQTMIITYERAGLVAHAKRLLHELKRPDNIPRDTAIHI 329
Query: 530 -------------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
FR G V D + M+ +FSK + ++++ M+ G D
Sbjct: 330 LAGAGRIEEATWVFRQAIEAGEVKDITVFEHMIDLFSKYKKYSNIIEVFDKMRGIGYFPD 389
Query: 574 ERLYHSAMNA 583
R+ +NA
Sbjct: 390 SRVIALVLNA 399
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/424 (19%), Positives = 191/424 (45%), Gaps = 14/424 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS----CVRARKFKI 170
P++ T LI + + ++D +S + + V D S L+ C ++ I
Sbjct: 7 PDRYTYSTLITHFGKEGRFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 171 ANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ L + IT L+A+NS + + K ++ + +M++AG++ ++ Y ++
Sbjct: 67 FSRLKRSGITPD---LVAYNSMINVFGKAKLFKEARSLIGEMRTAGVMPNTISYSTLLTM 123
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y + + + + AL + + R++ + I+ D G+ G A EA K F ++ I
Sbjct: 124 Y--VENKKFIEALSVFAEMREIQCS-LDLITCNIMIDVYGQLGMAKEADKLFWGXRKMEI 180
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
+ Y +L+ + A LF+ + K + ++ ++++Y + EK +
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANN 240
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+++ M+N ++ + I++ + K A ++++L S G QV Y ++I Y
Sbjct: 241 LIQEMQNRGIEPNTITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIITYE 300
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
R L + A+++ E+++ + + + + GRI +A W+ + G ++
Sbjct: 301 RAGLVAHAKRLLHELKRPD----NIPRDTAIHILAGAGRIEEATWVFRQAIEAGEVKDIT 356
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
++ ++D+ + K + +++ +M PD V++AY + +EFD + Y E
Sbjct: 357 VFEHMIDLFSKYKKYSNIIEVFDKMRGIGYFPDSRVIALVLNAYGKLQEFDKANEVYMEM 416
Query: 531 RMNG 534
+ G
Sbjct: 417 QDEG 420
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 101/212 (47%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + + A +M++ +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGRFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YNS++++ G+AK ++ L EM V P+ +SY+T+++ Y
Sbjct: 67 FSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLIGEMRTAGVMPNTISYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R +D IM+ V+ +L +E KL + + +
Sbjct: 127 NKKFIEALSVFAEMREIQCSLDLITCNIMIDVYGQLGMAKEADKLFWGXRKMEIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 149/360 (41%), Gaps = 24/360 (6%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ +I ++K + SL + + V+P+ + S L+ V +KF A
Sbjct: 77 PDLVAYNSMINVFGKAKLFKEARSLIGEMRTAGVMPNTISYSTLLTMYVENKKFIEA--- 133
Query: 175 LQVFITDGEIA----LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
L VF EI L+ N + Y +L M ++ + I + Y ++
Sbjct: 134 LSVFAEMREIQCSLDLITCNIMIDVYGQLGMAKEADKLFWGXRKMEIEPNVVSYNTLLRV 193
Query: 231 YYKIGDSE---KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
Y GD+E + LF + + ++ + Y + GK+ +A ++M+
Sbjct: 194 Y---GDAELFGEAIHLFRLMQRKNIEQNVVT---YNTMMMIYGKTLEHEKANNLIQEMQN 247
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
+GI + Y+++I + + ++ A LF++ G+ D + +++ Y GLV
Sbjct: 248 RGIEPNTITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIITYERAGLVAH 307
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
++ +K I + I+ G + A V+ Q I G + + +I+
Sbjct: 308 AKRLLHELKRPD-NIPRDTAIHILAGAGRIE---EATWVFRQAIEAGEVKDITVFEHMID 363
Query: 408 AYCRIALYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
+ + YS +VF +M+ G+ D V+A ++ YGK A + +M+ +GC
Sbjct: 364 LFSKYKKYSNIIEVFDKMRGIGYFPDSRVIAL--VLNAYGKLQEFDKANEVYMEMQDEGC 421
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 196 YNKLHMYYSTILVYEK-------MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
YN + M Y L +EK M++ GI ++ Y I+ + K+G ++ A LF + +
Sbjct: 222 YNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNTITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE-KGILEDPSIYASLICSFASI 307
S ++ +Y+ + + ++G A + ++K I D +I+ A
Sbjct: 282 SSGIE---IDQVLYQTMIITYERAGLVAHAKRLLHELKRPDNIPRDTAIHI-----LAGA 333
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++ A +F++A E G ++D V ++ ++ + ++V + M+ +
Sbjct: 334 GRIEEATWVFRQAIEAGEVKDITVFEHMIDLFSKYKKYSNIIEVFDKMRGIGYFPDSRVI 393
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
++N + K + + A +VY ++ +GCI
Sbjct: 394 ALVLNAYGKLQEFDKANEVYMEMQDEGCI 422
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 98/227 (43%), Gaps = 9/227 (3%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
E P + L+R ++ + + L + N+ + T + ++ + + + A
Sbjct: 179 EIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKA 238
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
N L+Q G E + +++ + + K+ ++++K++S+GI +D Y ++
Sbjct: 239 NNLIQEMQNRGIEPNTITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIIT 298
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
Y + G L E K + D+ P T ++ L +GR EA FR E G
Sbjct: 299 YERAGLVAHAKRLLHELK--RPDNIPRDTAIH-----ILAGAGRIEEATWVFRQAIEAGE 351
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
++D +++ +I F+ + E+F + G D V + LVL
Sbjct: 352 VKDITVFEHMIDLFSKYKKYSNIIEVFDKMRGIGYFPDSRV-IALVL 397
>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g19290
gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 145/303 (47%), Gaps = 1/303 (0%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILE-DPSIYASLICSFASITEVKLAEELFKEAEE 322
I+ ++ +SG +A+ F ++ + LE + Y SLI +A I +V+ + + E
Sbjct: 230 IVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSE 289
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
+G+ R+ L+ Y ++GL+E+ V E +K KL + +++G+ +
Sbjct: 290 RGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRD 349
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
AV+V++ +I G S+IN YC+ +AE++F M Y+++V
Sbjct: 350 AVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVD 409
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
Y + G + +A+ L +M K P V YN L+ + R V LWK M +R V
Sbjct: 410 GYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNA 469
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D++S +T++ A + +F+ +K + G + D +M+ K+ ++ E ++L
Sbjct: 470 DEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL 529
Query: 563 QDM 565
++
Sbjct: 530 DNV 532
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/445 (20%), Positives = 197/445 (44%), Gaps = 13/445 (2%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL------LAFNSAMGGYNKL 199
+ V PD TCS +V + R+ A VF + E +L + +NS + GY +
Sbjct: 219 FEVSPDVFTCSIVVNAYCRSGNVDKA----MVFAKETESSLGLELNVVTYNSLINGYAMI 274
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
V M G+ + Y +++ Y K G E+ +F K +KL +
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVA---DQ 331
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
HMY +L D ++G+ +A++ +M E G+ + +I SLI + ++ AE++F
Sbjct: 332 HMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSR 391
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ + D LV Y G V++ L + + M ++ + ++ G+S+
Sbjct: 392 MNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGA 451
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ + +++ ++ +G +++ ++++ A ++ +++A K++ + +G + +
Sbjct: 452 FHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNV 511
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
M++ K ++ +A ++ + C+P V Y +L + + NL++ + + MER+
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P Y T+IS + R + E R G A G ++ + + I++
Sbjct: 572 IFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAY 631
Query: 560 KLLQDMKSEGTKLDERLYHSAMNAL 584
+M +G L+ + N+L
Sbjct: 632 ATCFEMIEKGITLNVNICSKIANSL 656
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 3/274 (1%)
Query: 329 PEV--CLKLVLMYIEEGLVEKTLDVV-ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
P+V C +V Y G V+K + E+ + L+++ +++NG++ +
Sbjct: 223 PDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTR 282
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
V + +G VTY S+I YC+ L +AE VF +++K Y ++ Y
Sbjct: 283 VLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYC 342
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+TG+IRDA+ + M G N I NSL++ + ++ L + E+++ M + PD
Sbjct: 343 RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHH 402
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y T++ Y RA D +K ++ V I++ +S++ +++ L + M
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
G DE + + AL G +A L +N
Sbjct: 463 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWEN 496
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 166/381 (43%), Gaps = 14/381 (3%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITD 181
L+ L + ++ + L E+ +L D T + +++ + K A +L V I
Sbjct: 477 LLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 536
Query: 182 GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ A+ + + GY K+ V E M+ GI Y ++ +K KVA
Sbjct: 537 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVA 596
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
L +E ++R L TP + Y L G +A +M EKGI + +I + +
Sbjct: 597 DLVIELRARGL--TP-TVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIA 653
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE--KTLDVVESMKNA- 358
S + ++ A L ++ + +L LK ++E KT + ES++N+
Sbjct: 654 NSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLK---EFLEASATTCLKTQKIAESVENST 710
Query: 359 --KLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQG-CIPGQVTYASIINAYCRIAL 414
KL + + I + + G K A K++ L+S IP + TY +I+
Sbjct: 711 PKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGD 770
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+KA + EM KG +V Y++++ K G + A L+ K+ KG PN YN+
Sbjct: 771 INKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNT 830
Query: 475 LMDMHGRAKNLRQVEKLWKEM 495
L+D ++ N+ + +L ++M
Sbjct: 831 LIDGLVKSGNVAEAMRLKEKM 851
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/492 (17%), Positives = 181/492 (36%), Gaps = 84/492 (17%)
Query: 150 PDAHTCSRLVASCVRA----RKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYST 205
PD HT + LV RA K+ + + Q + ++ +N + GY+++ ++
Sbjct: 399 PDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVP---TVMTYNILLKGYSRIGAFHDV 455
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ +++ M G+ D ++EA +K+GD
Sbjct: 456 LSLWKMMLKRGVNADEISCSTLLEALFKLGDFN--------------------------- 488
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
EA+K + ++ +G+L D +I + +V A+E+
Sbjct: 489 -----------EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 537
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ L Y + G +++ V E M+ + + + +++G K R
Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVAD 597
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+ +L ++G P TY ++I +C I + KA EM +KG V S +
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLF 657
Query: 446 KTGRIRDAMWLVAKM-------------------KAKGC-------------------EP 467
+ +I +A L+ K+ A C P
Sbjct: 658 RLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVP 717
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEM-ERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
N +YN + +A L KL+ ++ + PD+ +YT +I A + +
Sbjct: 718 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 777
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+E + G + + ++ KL ++ +LL + +G + Y++ ++ L
Sbjct: 778 RDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVK 837
Query: 587 AGLQMQAQWLQQ 598
+G +A L++
Sbjct: 838 SGNVAEAMRLKE 849
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 90/464 (19%), Positives = 185/464 (39%), Gaps = 56/464 (12%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ + G + Y +EA KL + +K + ++ Y + K + I
Sbjct: 399 PDHHTYNTLVDGYCRA--------GYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIG 450
Query: 138 SLSEDFKIYNVL------PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFN 190
+ + ++ ++ D +CS L+ + + F A L + + G + + N
Sbjct: 451 AFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLN 510
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDS----------GCYCQIMEAYYKIGDSEKV 240
+ G K+ EK+ A +LD+ Y + YYK+G+ ++
Sbjct: 511 VMISGLCKM----------EKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEA 560
Query: 241 AAL--FLECKSRKLDSTPFST-HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
A+ ++E K F T MY L K + +++ +G+ + Y
Sbjct: 561 FAVKEYMERKG------IFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV-----LMYIEEG--LVEKTLD 350
+LI + +I + A E EKG+ + +C K+ L I+E L++K +D
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD 674
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ + + + + + ++ A V + +P + Y I C
Sbjct: 675 F-DLLLPGYQSLKEFLEASATTCLKTQK---IAESVENSTPKKLLVPNNIVYNVAIAGLC 730
Query: 411 RIALYSKAEKVFIEM-QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ A K+F ++ F Y+ ++ G I A L +M KG PN+
Sbjct: 731 KAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNI 790
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
YN+L+ + N+ + ++L ++ ++ +TP+ ++Y T+I
Sbjct: 791 VTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
>gi|356557985|ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 692
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 155/340 (45%), Gaps = 9/340 (2%)
Query: 236 DSEKVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
D E LF E R K D+ FST L + SG +A++ F M G D
Sbjct: 171 DFEGAEKLFDEMLQRGVKPDNITFST-----LVNCASVSGLPNKAVELFEKMSGFGCEPD 225
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+ ++ ++A V A L+ A+ + D L+ MY G +K L+V +
Sbjct: 226 GITCSGMVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTLIKMYSMAGNYDKCLEVYQ 285
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
MK +K + ++ + + + A +++++ S G P +TYAS++ Y R
Sbjct: 286 EMKVLGVKPNVATYNTLLGAMLRSKKHRQAKAIHKEMKSNGVSPDFITYASLLEVYTRAQ 345
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG-CEPNVWIY 472
A V+ EM+ G D Y+ ++AM G A+ + +MK+ G C+P+ W +
Sbjct: 346 CSEDALGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTF 405
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+SL+ ++ R+ + +VE + EM + P T++I Y +A+ D VK + +
Sbjct: 406 SSLITIYSRSGKVSEVEGMLNEMIQSGFQPTIFVMTSLIRCYGKAKRTDDVVKIFKQLLD 465
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
G V + ++ V ++ + EEL KL ++ TKL
Sbjct: 466 LGIVPNDHFCCCLLNVLTQTPK-EELGKLTDCIEKANTKL 504
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 107/228 (46%), Gaps = 35/228 (15%)
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG-------- 429
R + A K++++++ +G P +T+++++N L +KA ++F +M G
Sbjct: 170 RDFEGAEKLFDEMLQRGVKPDNITFSTLVNCASVSGLPNKAVELFEKMSGFGCEPDGITC 229
Query: 430 ------------FDKCV---------------VAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
DK V V +S+++ MY G + + +MK
Sbjct: 230 SGMVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTLIKMYSMAGNYDKCLEVYQEMKV 289
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
G +PNV YN+L+ R+K RQ + + KEM+ V+PD ++Y +++ Y RA+ +
Sbjct: 290 LGVKPNVATYNTLLGAMLRSKKHRQAKAIHKEMKSNGVSPDFITYASLLEVYTRAQCSED 349
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
+ Y E + NG + + ++ + + + + V++ +MKS GT
Sbjct: 350 ALGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDRAVEIFYEMKSSGT 397
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%)
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+ AEK+F EM Q+G + +S++V +G A+ L KM GCEP+ +
Sbjct: 172 FEGAEKLFDEMLQRGVKPDNITFSTLVNCASVSGLPNKAVELFEKMSGFGCEPDGITCSG 231
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
++ + R N+ + L+ + + D V+++T+I Y+ A +D C++ Y E ++ G
Sbjct: 232 MVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTLIKMYSMAGNYDKCLEVYQEMKVLG 291
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ A ++G + + + + ++MKS G D Y S +
Sbjct: 292 VKPNVATYNTLLGAMLRSKKHRQAKAIHKEMKSNGVSPDFITYASLL 338
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 121/287 (42%), Gaps = 5/287 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKF-KIAN 172
+P+ T L+ S + V L E + PD TCS +V + R K N
Sbjct: 188 KPDNITFSTLVNCASVSGLPNKAVELFEKMSGFGCEPDGITCSGMVYAYARTNNVDKAVN 247
Query: 173 TLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+ + + + F++ + Y+ Y + VY++MK G+ + Y ++ A
Sbjct: 248 LYDRAKAENWSLDAVTFSTLIKMYSMAGNYDKCLEVYQEMKVLGVKPNVATYNTLLGAML 307
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+ + A+ E KS + S F T Y L + ++ + +AL +++MK G+
Sbjct: 308 RSKKHRQAKAIHKEMKSNGV-SPDFIT--YASLLEVYTRAQCSEDALGVYKEMKGNGMDM 364
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLR-DPEVCLKLVLMYIEEGLVEKTLDV 351
+Y L+ A + A E+F E + G + D L+ +Y G V + +
Sbjct: 365 TADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTFSSLITIYSRSGKVSEVEGM 424
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+ M + + + + +++ + K + VK+++QL+ G +P
Sbjct: 425 LNEMIQSGFQPTIFVMTSLIRCYGKAKRTDDVVKIFKQLLDLGIVPN 471
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 114/281 (40%), Gaps = 45/281 (16%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A + Y+ AK + + T LI+ + +D + + ++ K+ V P+ T + L+
Sbjct: 245 AVNLYDRAKA-ENWSLDAVTFSTLIKMYSMAGNYDKCLEVYQEMKVLGVKPNVATYNTLL 303
Query: 160 ASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVL 219
+ +R++K + A ++++MKS G+
Sbjct: 304 GAMLRSKKHRQAKA----------------------------------IHKEMKSNGVSP 329
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
D Y ++E Y + SE ++ E K +D T + +C +G + RA E
Sbjct: 330 DFITYASLLEVYTRAQCSEDALGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDRAVE-- 387
Query: 280 KFFRDMKEKGILE-DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
F +MK G + D ++SLI ++ +V E + E + G V L+
Sbjct: 388 -IFYEMKSSGTCQPDSWTFSSLITIYSRSGKVSEVEGMLNEMIQSGFQPTIFVMTSLIRC 446
Query: 339 YIEEGLVEKTLDVVESMK---NAKLKISDCISCAIVNGFSK 376
Y G ++T DVV+ K + + +D C ++N ++
Sbjct: 447 Y---GKAKRTDDVVKIFKQLLDLGIVPNDHFCCCLLNVLTQ 484
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 137/326 (42%), Gaps = 3/326 (0%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+ +M++ G+ D Y ++ Y K G ++ LF + + L T + Y IL D
Sbjct: 366 FVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLT---YNILIDG 422
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
+ G EA + +M E+G L D Y L+ + + +A E F E KG+ D
Sbjct: 423 YCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPD 482
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
+ + G + K + E M + +++G K A +
Sbjct: 483 CFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQM 542
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
+++ G P +TY +I+A+C L +A K F +M G V Y+ + Y + G
Sbjct: 543 KMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRG 602
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ A KM +G EPN YN L+ R + + + EM R + P+K +YT
Sbjct: 603 NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYT 662
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNG 534
+I + ++ ++FY E NG
Sbjct: 663 LLIDGNCKEGNWEDAMRFYFEMHQNG 688
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 189/453 (41%), Gaps = 21/453 (4%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFK----IANTLLQVFITDGEIALLAFNSAMGGYNKLHM 201
+ V PD C+R++ A ++ + +LQ+ I E +++ +N+ + + K
Sbjct: 196 HGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGI---EPSIVTYNTLLDSFLKEGR 252
Query: 202 YYSTILVYEKMKSAGIVLDSGC------YCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
++ ++M++ G SGC + ++ + GD E+ A + + +L S
Sbjct: 253 NDKVAMLLKEMETRG----SGCLPNDVTHNVVITGLARKGDLEEAAEMV---EGMRL-SK 304
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
S+ Y L L G +A +M+ +GI+ Y ++I +V+ A+
Sbjct: 305 KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQV 364
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
F E G+ D L+ Y + G +++ L + +++A L + +++G+
Sbjct: 365 KFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYC 424
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
+ A ++ E+++ QGC+P TY ++ + A + F EM KG
Sbjct: 425 RLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCF 484
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
AY++ + G I A L M +G + YN L+D + NL + L +M
Sbjct: 485 AYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKM 544
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ PD ++YT +I A+ KF+ + +G + + + + +
Sbjct: 545 VHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNL 604
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ M EG + +E Y+ ++AL G
Sbjct: 605 YSAYGWFRKMLEEGVEPNEITYNVLIHALCRTG 637
>gi|225452658|ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 178/367 (48%), Gaps = 10/367 (2%)
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
E LF E + R L ++ Y L GK G AL + + M++ + D +Y
Sbjct: 172 ELAHGLFEEMRQRALAPDRYT---YSTLITHFGKEGMFDSALSWLQKMEQDRVSGDLVLY 228
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++LI + + A +F + G+ D ++ ++ + L + ++ M+
Sbjct: 229 SNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGKAKLFREARLLLPEMRA 288
Query: 358 AKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ + D +S +++ + + Y A+ V+ ++ C T +I+ Y ++ +
Sbjct: 289 GGV-MPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAK 347
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+A+++F M++ G + +V+Y++++ +YG+ +A+ L M+ K E NV YN+++
Sbjct: 348 EADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI 407
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
++G++ + L +EM+ R + P+ ++Y+T+IS +++A + D + + R +G
Sbjct: 408 KIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIE 467
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
ID+ + M+ + + + +LL ++K + D +A+ L AG +A W+
Sbjct: 468 IDQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAITILAGAGRIEEATWV 523
Query: 597 -QQNFEG 602
+Q F+
Sbjct: 524 FRQAFDA 530
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 176/412 (42%), Gaps = 44/412 (10%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL--DSTPFST--HMYK 263
++E+M+ + D Y ++ + K G + + + + ++ D +S + +
Sbjct: 177 LFEEMRQRALAPDRYTYSTLITHFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSR 236
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
LCD +A+ F +K GI D Y S+I F + A L E
Sbjct: 237 KLCD-------YSKAISIFSRLKRSGISPDLVAYNSMINVFGKAKLFREARLLLPEMRAG 289
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWA 382
G++ D L+ MY+E G + L V M + + D +C + ++ + +
Sbjct: 290 GVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPL-DLTTCNVMIDVYGQLDMAKE 348
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A +++ + G PG V+Y +++ Y L+ +A +F MQ+K ++ VV Y++M+
Sbjct: 349 ADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 408
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+YGK+ A LV +M+ +G EPN Y++++ + +A L + L++++ +
Sbjct: 409 IYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEI 468
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMN----------------------------- 533
D+V Y T+I AY RA + +E +
Sbjct: 469 DQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAGAGRIEEATWVFRQAF 528
Query: 534 --GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
G V D + G M+ +FS+ + ++++ M+ G D + +NA
Sbjct: 529 DAGEVKDITVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLNA 580
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 99/505 (19%), Positives = 212/505 (41%), Gaps = 50/505 (9%)
Query: 102 DYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS 161
D+ NE + P ++IR ++++K+W+ L E+ + + PD +T S L+
Sbjct: 143 DWINEE---ASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITH 199
Query: 162 CVRARKFKIANTLLQVFITD---GEIAL-------------------------------- 186
+ F A + LQ D G++ L
Sbjct: 200 FGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPD 259
Query: 187 -LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+A+NS + + K ++ L+ +M++ G++ D+ Y ++ Y + G + ++F
Sbjct: 260 LVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFS 319
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLICS 303
E + P ++ D G+ A EA + F M++ GI +P I Y +L+
Sbjct: 320 EMNEVR---CPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGI--EPGIVSYNTLLRV 374
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++ +Y + EK ++V+ M+N ++ +
Sbjct: 375 YGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPN 434
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 435 AITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLH 494
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ + + + + GRI +A W+ + G ++ ++ ++D+ R +
Sbjct: 495 ELKRPD----NIPRETAITILAGAGRIEEATWVFRQAFDAGEVKDITVFGCMIDLFSRNR 550
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
V +++ +M PD V++A + REF+ Y E G V +
Sbjct: 551 KHTNVIEVFDKMRGAGYFPDSNVIALVLNACGKLREFEKADAIYKEMEEEGCVFSDEVHF 610
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSE 568
M+ ++ + + L + + S+
Sbjct: 611 QMLSLYGARGDFQMVDSLFERLDSD 635
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 81/177 (45%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P Y +I R + A +F EM+Q+ YS+++ +GK G A+
Sbjct: 153 PSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDSALSW 212
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ KM+ ++ +Y++L+++ + + + ++ ++R ++PD V+Y ++I+ + +
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGK 272
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
A+ F E R G + D ++ ++ + + E + + +M LD
Sbjct: 273 AKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLD 329
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%)
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
P+V+ YN ++ RAK L++EM +R + PD+ +Y+T+I+ + + FD + +
Sbjct: 153 PSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDSALSW 212
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ + D + ++ + KL + + + +K G D Y+S +N
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGK 272
Query: 587 AGLQMQAQWL 596
A L +A+ L
Sbjct: 273 AKLFREARLL 282
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 174/377 (46%), Gaps = 16/377 (4%)
Query: 158 LVASCVRARKFKIANTLLQVFITDG---EIALLAF-NSAMGGYNKLHMYYSTILVYEKMK 213
L S +A +A + + +DG LL F S+ KLH + +L +++
Sbjct: 109 LTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVE 168
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
+V++S ++ K+ E LF E + S T + IL L G
Sbjct: 169 GCCMVVNS-----LLNTLVKLDRVEDAMKLFDE--HLRFQSCN-DTKTFNILIRGLCGVG 220
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
+A +AL+ M G D Y +LI F E+ A E+FK+ + G + P+V
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPDVVT 279
Query: 334 --KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
++ Y + G + + +++ M + ++ +V+G++K A ++ ++I
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
S GC P VT+ S+I+ YCR+ S+ +++ EM +G YS ++ R+
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 452 DAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
A L+ ++ +K P ++YN ++D +A + + + +EME++K PDK+++T +I
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 512 SAY-NRAREFDMCVKFY 527
+ + R F+ F+
Sbjct: 460 IGHCMKGRMFEAVSIFH 476
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 178/416 (42%), Gaps = 35/416 (8%)
Query: 204 STILVYEKMKSAGIVLDSG-CYCQI---------MEAYYKIGDSEKVAALFLECKSRKLD 253
ST+ VY V DS C+C + E K+ ++ + F E KL+
Sbjct: 46 STLFVYR-------VPDSDLCFCYLSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLN 98
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
S Y +L SL K+G A + F MK G+ + + L+ SFA ++ A
Sbjct: 99 -IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE-SMK--NAKLKISDCISCAI 370
L ++ E E C +V+ + LV+ LD VE +MK + L+ C
Sbjct: 158 TALLLQSFEV------EGCC-MVVNSLLNTLVK--LDRVEDAMKLFDEHLRFQSCNDTKT 208
Query: 371 VN----GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
N G A+++ + GC P VTY ++I +C+ +KA ++F +++
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 427 QKGF-DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
VV Y+SM++ Y K G++R+A L+ M G P +N L+D + +A +
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
E++ +M PD V++T++I Y R + + + E G + I+
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ +++ + +LL + S+ +Y+ ++ AG +A + + E
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 167/363 (46%), Gaps = 44/363 (12%)
Query: 224 YCQIMEAYYKIGD---SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALK 280
+ ++ AY K+G+ +E+V ++ K+ STP + Y L +S G+ G+ A
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVL-----SKMGSTP-NVISYTALMESYGRGGKCNNAEA 202
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
FR M+ G Y ++ +F + K AEE+F
Sbjct: 203 IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF----------------------- 239
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
E LD K + LK + ++ + K Y A KV+ ++ +G V
Sbjct: 240 -----ETLLD----EKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 290
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TY S+++ Y + K++ +MQ+ VV+Y+ ++ YG+ R +A+ + +M
Sbjct: 291 TYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 347
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
G P YN L+D + + Q + ++K M R ++ PD SYTT++SAY A +
Sbjct: 348 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 407
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ KF+ +++G + G ++ ++K + +E+++++ + M+ G K ++ + +
Sbjct: 408 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTI 467
Query: 581 MNA 583
M+A
Sbjct: 468 MDA 470
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 142/324 (43%), Gaps = 17/324 (5%)
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+G A L+ ++ ++G+ D + + F + + L E+ + + E+
Sbjct: 90 TGSAVPVLRQYKTDGDQGLPRD--LVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEI 147
Query: 332 -CLKLVLMYIEEG---LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
L L+ Y + G E+ L V+ M + IS A++ + + A ++
Sbjct: 148 DFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVIS---YTALMESYGRGGKCNNAEAIF 204
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF---IEMQQKGFDKCVVAYSSMVAMY 444
++ S G P +TY I+ + + +AE+VF ++ ++ Y M+ MY
Sbjct: 205 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 264
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
K G A + + M KG + YNSLM + ++V K++ +M+R + PD
Sbjct: 265 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE---TSYKEVSKIYDQMQRSDIQPDV 321
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEELVKLLQ 563
VSY +I AY RAR + + + E ++ GV A I++ F+ +E+ + +
Sbjct: 322 VSYALLIKAYGRARREEEALSVFEEM-LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 380
Query: 564 DMKSEGTKLDERLYHSAMNALRDA 587
M+ + D Y + ++A +A
Sbjct: 381 SMRRDRIFPDLWSYTTMLSAYVNA 404
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 57/149 (38%), Gaps = 32/149 (21%)
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ YGK G A +++ + G PNV Y +LM+ +GR E +++ M+
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
P ++Y ++ + +F + EE+
Sbjct: 212 PEPSAITYQIILKTFVEGDKF--------------------------------KEAEEVF 239
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ L D K K D+++YH + + AG
Sbjct: 240 ETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 189/418 (45%), Gaps = 10/418 (2%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGI---VLDSGCYCQ 226
A L++ DG + + ++S M GY + ++V+E++K G ++ GC
Sbjct: 392 AEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGC--- 448
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
++ Y KIG K ++ E +S + + Y +L + A F +M
Sbjct: 449 LLNLYVKIGKVAKALSISKEMESCGIKH---NNKTYSMLINGFIHLHDFANAFAIFEEML 505
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
G+ D +IY LI +F + + A + ++ +++ M ++ Y G ++
Sbjct: 506 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMK 565
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
LD ++ M+ + + A+++G ++ AV V +++ G P + TY I+
Sbjct: 566 SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 625
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
Y KA + F ++++ G V Y +++ K+GR++ A+ + +M +
Sbjct: 626 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 685
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
N +IYN L+D R ++ + E L K+M+ V P+ +YT+ I+A +A + K
Sbjct: 686 RNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKV 745
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
E G + ++ ++++S + +K ++MK G K DE YH + +L
Sbjct: 746 IEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSL 803
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 185/432 (42%), Gaps = 52/432 (12%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+E M++ GI ++ + ++ AY D + E KS L+ T + Y IL
Sbjct: 319 TFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVT---YSILIS 375
Query: 268 SLGK------SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
K SG A + R+M+E GI +Y S++ + I +F+ +
Sbjct: 376 GFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 435
Query: 322 EKGMLRDPEV----CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E G P + CL + +Y++ G V K L + + M++ +K ++ ++NGF
Sbjct: 436 ECGF--KPSIISYGCL--LNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHL 491
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
+ A ++E+++ G P + Y +I A+C++ +A + +MQ++ A+
Sbjct: 492 HDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAF 551
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++ Y G ++ A+ + M+ GC P V YN+L+ R +++ + +M
Sbjct: 552 RPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI 611
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID--------RA--------- 540
+TP++ +YT ++ Y + + +++ + + +G +D RA
Sbjct: 612 AGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQS 671
Query: 541 ------------------IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
I I++ +++ + E L++ MK +G + Y S +N
Sbjct: 672 ALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYIN 731
Query: 583 ALRDAGLQMQAQ 594
A AG +A+
Sbjct: 732 ACCKAGDMQRAE 743
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/455 (20%), Positives = 182/455 (40%), Gaps = 29/455 (6%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F+P + L+ V+ K +S+S++ + + + T S L+ + F A
Sbjct: 439 FKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAF 498
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + + G + +N + + K+ I + EKM+ + + + I+E Y
Sbjct: 499 AIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGY 558
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
GD + +AL R+ P + Y L L + + A+ M GI
Sbjct: 559 AVAGDMK--SALDTLDLMRRSGCVP-TVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGIT 615
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y ++ +A+ ++ A E F + +E G+ D + L+ + G ++ L V
Sbjct: 616 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 675
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
M K+ + I +++G+++R W A + +Q+ G P TY S INA C+
Sbjct: 676 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 735
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+AEKV EM G V Y++++ + + A+ +MK G +P+
Sbjct: 736 AGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEAS 795
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV------- 524
Y+ L+ + R + +YT +IS E D+ V
Sbjct: 796 YHCLV----------------TSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVH 839
Query: 525 --KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
++ ++ GG + A+ I ++ L + E
Sbjct: 840 WSRWLHKIERTGGALTEALQRIFPPDWNSLEFLGE 874
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 120/260 (46%), Gaps = 6/260 (2%)
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
+++ Y + G E+M+ ++ + + ++V+ ++ R A+ E++ S+G
Sbjct: 303 MIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEG 362
Query: 395 CIPGQVTYASIINAYCRI------ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
VTY+ +I+ + +I +AE++ EM++ G D + Y SM+ Y
Sbjct: 363 LELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQ 422
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ + ++K G +P++ Y L++++ + + + + KEME + + +Y+
Sbjct: 423 NENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYS 482
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I+ + +F + E +G DRAI +++ F K+ ++ + +L+ M+ E
Sbjct: 483 MLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKE 542
Query: 569 GTKLDERLYHSAMNALRDAG 588
+ R + + AG
Sbjct: 543 RMQPSNRAFRPIIEGYAVAG 562
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 29/147 (19%)
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
+ M+ Y K G A M+A+G EPN +++ SL+ + A+++R +EM+
Sbjct: 300 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 359
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ V+Y+ +IS + + + G ++RA E
Sbjct: 360 SEGLELTIVTYSILISGFAKIND-----------SHQSGNMERA---------------E 393
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNA 583
ELV+ +M+ +G +YHS M+
Sbjct: 394 ELVR---EMEEDGIDAPIDVYHSMMHG 417
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 174/376 (46%), Gaps = 14/376 (3%)
Query: 158 LVASCVRARKFKIANTLLQVFITDG---EIALLAF-NSAMGGYNKLHMYYSTILVYEKMK 213
L S +A +A + + +DG LL F S+ KLH + +L +++
Sbjct: 109 LTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQSYEVE 168
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
+V++S ++ K+ E LF E + S T + IL L G
Sbjct: 169 GCCMVVNS-----LLNTLVKLDRVEDAMKLFEE--HLRFQSCN-DTKTFNILIRGLCGVG 220
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK-GMLRDPEVC 332
+A +A++ M G L D Y +LI F E+K A E+F + + G D
Sbjct: 221 KAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTY 280
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
++ Y + G +++ +++ M + ++ +V+G++K A ++ ++IS
Sbjct: 281 TSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMIS 340
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
GC P VT+ S+I+ YCR+ ++ +++ EM +G YS ++ K R+
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLK 400
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A L+ ++ +K P ++YN ++D +A + + + +EME++K PDK+++T +I
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILII 460
Query: 513 AY-NRAREFDMCVKFY 527
+ + R F+ F+
Sbjct: 461 GHCMKGRMFEAVSIFH 476
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 175/403 (43%), Gaps = 35/403 (8%)
Query: 204 STILVYEKMKSAGIVLDSG-CYCQI---------MEAYYKIGDSEKVAALFLECKSRKLD 253
ST+ VY V DS C+C + E K+ ++ + F E KL+
Sbjct: 46 STLFVYR-------VPDSDLCFCYLSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLN 98
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
S Y +L SL K+G A + F MK GI + + L+ SFA ++ A
Sbjct: 99 -IRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCA 157
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE-SMK--NAKLKISDCISCAI 370
L ++ E E C +V+ + LV+ LD VE +MK L+ C
Sbjct: 158 TALLLQSYEV------EGCC-MVVNSLLNTLVK--LDRVEDAMKLFEEHLRFQSCNDTKT 208
Query: 371 VN----GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
N G AV++ + GC+P VTY ++I +C+ KA ++F +++
Sbjct: 209 FNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVK 268
Query: 427 QK-GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
G VV Y+SM++ Y K G++++A L+ M G P +N L+D + +A +
Sbjct: 269 SSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
E++ +M PD V++T++I Y R + + + + E G + I+
Sbjct: 329 HTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ K +++ + +LL + S+ +Y+ ++ AG
Sbjct: 389 INALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAG 431
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/306 (18%), Positives = 130/306 (42%), Gaps = 7/306 (2%)
Query: 116 EKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL 175
+ T +LIR L K + V L + LPD T + L+ ++ + K AN +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMF 264
Query: 176 QVFITDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ + ++ + S + GY K ++ + M GI + + +++ Y K
Sbjct: 265 DDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
G+ E + + + F + + L D + G+ + + + +M +G+
Sbjct: 325 AGEMHTAE----EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFP 380
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ Y+ LI + + A EL + K ++ P + ++ + + G V + + +V
Sbjct: 381 NAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIV 440
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
E M+ K K ++ G + + AV ++ ++++ GC P ++T +S+++ +
Sbjct: 441 EEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500
Query: 413 ALYSKA 418
+ +A
Sbjct: 501 GMAKEA 506
>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 167/363 (46%), Gaps = 44/363 (12%)
Query: 224 YCQIMEAYYKIGD---SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALK 280
+ ++ AY K+G+ +E+V ++ K+ STP + Y L +S G+ G+ A
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVL-----SKMGSTP-NVISYTALMESYGRGGKCNNAEA 195
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
FR M+ G Y ++ +F + K AEE+F
Sbjct: 196 IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF----------------------- 232
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
E LD K + LK + ++ + K Y A KV+ ++ +G V
Sbjct: 233 -----ETLLD----EKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 283
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TY S+++ Y + K++ +MQ+ VV+Y+ ++ YG+ R +A+ + +M
Sbjct: 284 TYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 340
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
G P YN L+D + + Q + ++K M R ++ PD SYTT++SAY A +
Sbjct: 341 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 400
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ KF+ +++G + G ++ ++K + +E+++++ + M+ G K ++ + +
Sbjct: 401 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTI 460
Query: 581 MNA 583
M+A
Sbjct: 461 MDA 463
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 8/209 (3%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF---IEMQQKGFDKCVVAYSS 439
A ++ ++ S G P +TY I+ + + +AE+VF ++ ++ Y
Sbjct: 193 AEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHM 252
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
M+ MY K G A + + M KG + YNSLM + ++V K++ +M+R
Sbjct: 253 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE---TSYKEVSKIYDQMQRSD 309
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEEL 558
+ PD VSY +I AY RAR + + + E ++ GV A I++ F+ +E+
Sbjct: 310 IQPDVVSYALLIKAYGRARREEEALSVFEEM-LDAGVRPTHKAYNILLDAFAISGMVEQA 368
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDA 587
+ + M+ + D Y + ++A +A
Sbjct: 369 KTVFKSMRRDRIFPDLWSYTTMLSAYVNA 397
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 32/149 (21%)
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ YGK G A +++ + G PNV Y +LM+ +GR E +++ M+
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
P ++Y ++ + + G K + EE+
Sbjct: 205 PEPSAITYQIILKTF--------------------------VEG------DKFKEAEEVF 232
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ L D K K D+++YH + + AG
Sbjct: 233 ETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 187/403 (46%), Gaps = 28/403 (6%)
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
+MK G V D Y ++ Y K D + E T + Y + D L
Sbjct: 35 RMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVT---YTNIVDGLC 91
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL--AEELFKEAEEKGMLRD 328
K+GR +A+K +M++KG P+IY + E KL A+++ +E +G D
Sbjct: 92 KAGRTKDAVKLLDEMRDKGC--SPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 149
Query: 329 PEVCLKLVLMY--IEEGLVEKTLDVVESMKN--AKLKIS-DCIS-CAIVNGFSKRRGYWA 382
V+ Y +GL + D V+ + A++ ++ D +S ++NG K +
Sbjct: 150 -------VVTYNSFIKGLCK--CDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDS 200
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A ++ +Q+ ++GC P VTY+S+I+ +C+ +A + M + G +VAY+S++
Sbjct: 201 ASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLG 260
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ G I A ++ +M+ +G P+V YN+ +D +A+ +++ + ++ M R TP
Sbjct: 261 ALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTP 320
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
+ SY+ ++ + +E D + + R ++D + +++ K + +E L
Sbjct: 321 NASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALF 380
Query: 563 QDMKSEGTKLDERLYHSAM---NALR---DAGLQMQAQWLQQN 599
+ E + +++ M + R D LQ+ Q L++N
Sbjct: 381 SKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERN 423
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 153/366 (41%), Gaps = 46/366 (12%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ IL L +S + +A + MKE G + D +IY +LI ++ + A + E
Sbjct: 13 FAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAE-- 70
Query: 322 EKGMLRDPEVCLKLVLMY--IEEGLVE--KTLDVV---ESMKNAKLKISDCISCAIVNGF 374
M+++ CL V+ Y I +GL + +T D V + M++ + IV G
Sbjct: 71 ---MVKNH--CLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125
Query: 375 SKRR---------------GYWAAVKVYEQLISQGC-----------------IPGQVTY 402
+ R GY+ V Y I C P V+Y
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSY 185
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
++IN C+ A ++ +M +G VV YSS++ + K G + AM L+ M
Sbjct: 186 TTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK 245
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
GC PN+ YNSL+ R ++ + E + EMERR TPD VSY I +A
Sbjct: 246 LGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKK 305
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
++ G + + ++V K ++++ + L++ + + +D LY ++
Sbjct: 306 AKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLD 365
Query: 583 ALRDAG 588
L G
Sbjct: 366 GLCKGG 371
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/462 (19%), Positives = 182/462 (39%), Gaps = 59/462 (12%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P+ T +L+R L +S + + L K +PD + L++ +A+ F A
Sbjct: 7 QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 66
Query: 174 LLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L + + + ++ + + + G K + + ++M+ G + Y I+E
Sbjct: 67 FLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL- 125
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
C+ RKLD EA K +M +G
Sbjct: 126 --------------CEERKLD-----------------------EAKKMLEEMAVRGYFP 148
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC--LKLVLMYIEEGLVEKTLD 350
D Y S I V A + M P+V ++ + G ++
Sbjct: 149 DVVTYNSFIKGLCKCDRVDEARKFLAR-----MPVTPDVVSYTTVINGLCKSGDLDSASR 203
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+++ M N ++++GF K A+ + + ++ GC P V Y S++ A
Sbjct: 204 MLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALH 263
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
R+ KAE + +EM+++GF VV+Y++ + K R++ A + +M +GC PN
Sbjct: 264 RLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNAS 323
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
Y+ L++ + K L L ++ + D + YT ++ + FD +++
Sbjct: 324 SYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSK- 382
Query: 531 RMNGGVIDRAIA-------GIMVGVFSKLSQIEELVKLLQDM 565
V+D I +M+ K QI++ +++ + M
Sbjct: 383 -----VLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 419
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 108/266 (40%), Gaps = 67/266 (25%)
Query: 390 LISQGCIPGQVTYASIINAYCR-----------------------------IALYSKAE- 419
+I + C P T+A ++ CR I+ YSKA+
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 420 -----KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
K EM + VV Y+++V K GR +DA+ L+ +M+ KGC PN++ YN
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 475 LMDMHGRAKNLRQVEKLWKEM--------------------------ERRK------VTP 502
+++ + L + +K+ +EM E RK VTP
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D VSYTTVI+ ++ + D + ++ G D ++ F K ++E + LL
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAG 588
M G + + Y+S + AL G
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLG 266
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 109/503 (21%), Positives = 209/503 (41%), Gaps = 41/503 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKK----LPEFRPEKSTLKLLIRYLVQSKKW 133
PD ++SF+ G+ K D +EA+K +P P+ + +I L +S
Sbjct: 148 PDVVTYNSFIKGLCK--------CDRVDEARKFLARMP-VTPDVVSYTTVINGLCKSGDL 198
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
DS + + PD T S L+ + + + A LL + G ++A+NS
Sbjct: 199 DSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSL 258
Query: 193 MGGYNKL-HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+G ++L H+ + ++ E M+ G D Y ++ K +K A+F R
Sbjct: 259 LGALHRLGHIGKAEDMLVE-MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERG 317
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
TP ++ Y +L + L K +A+ +EK + D +Y L+
Sbjct: 318 --CTPNASS-YSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFD 374
Query: 312 LAEELF-KEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISC 368
A LF K +EK + +P+V V++ + + ++K L + + M +C +
Sbjct: 375 EACALFSKVLDEK--ICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE-----RNCCNV 427
Query: 369 A----IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+V+G A + ++ +G IP VTY ++++A C+ + A ++F E
Sbjct: 428 VTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEE 487
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+ G VV YS+++ +A L K+ +V ++N+++ + +
Sbjct: 488 AVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGS 540
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISA-YNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
KL+ E+ V P+ ++ IS +A ++ G D +A
Sbjct: 541 GDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVAN 600
Query: 544 IMVGVFSKLSQIEELVKLLQDMK 566
++ VF+K +EE ++ MK
Sbjct: 601 TLIDVFAKCGDLEEARRIFYSMK 623
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 145/316 (45%), Gaps = 17/316 (5%)
Query: 282 FRDMKEKGILEDPSI--YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
+ +M + GI +PSI Y +L+ SF V A +L +E E + P CL + Y
Sbjct: 219 YAEMLQLGI--EPSIVTYNTLLDSFFREGRVDQAAKLLREMEAR-----PGGCLPSDVTY 271
Query: 340 -------IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
+G +EK +V+ M+ +K K S ++ G+ R A + ++ +
Sbjct: 272 NVVINGLARKGELEKAAQLVDRMRMSK-KASAFTFNPLITGYFARGSVEKAGALQLEMEN 330
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
+G +P VTY +II+ R A F+EM+ G ++ Y+S++ Y K G +++
Sbjct: 331 EGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKE 390
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A+WL +K G P+V YN L+D + R +L + + +EM + PD +YT +++
Sbjct: 391 ALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMN 450
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
+ R M +F++E G D + L E +L + M S G
Sbjct: 451 GSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISS 510
Query: 573 DERLYHSAMNALRDAG 588
D Y+ ++ L +G
Sbjct: 511 DTVTYNIFLDGLCKSG 526
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 156/355 (43%), Gaps = 15/355 (4%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ +N+ + G + + + + +M++ G++ D Y ++ Y K G+ ++ LF
Sbjct: 337 VVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFG 396
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ K L + + Y IL D + G EA +F ++M E+G D S Y L+
Sbjct: 397 DLKRAGLAPSVLT---YNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSR 453
Query: 306 SITEVKLAEELFKEAEEKGMLRD-----PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL 360
+ + + E F E KG+ D + +L+L G + + E M + +
Sbjct: 454 KVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELIL-----GSTSEAFQLTEVMISRGI 508
Query: 361 KISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
SD ++ I ++G K A ++ +++S G P +TY +I+A+C +A
Sbjct: 509 S-SDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREAR 567
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
+F M G V Y+ + Y + G + A KM +G PN YN L+
Sbjct: 568 DIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHAL 627
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
R + + EM R ++P+K +YT +I + ++ ++ Y+E +G
Sbjct: 628 CRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHG 682
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/526 (20%), Positives = 207/526 (39%), Gaps = 27/526 (5%)
Query: 69 RDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
R+ H P K+ + L L+D + Y E +L P T L+
Sbjct: 185 REMAHHGVPPFIKECNLVLRA-LRDEARWDDMRSVYAEMLQL-GIEPSIVTYNTLLDSFF 242
Query: 129 QSKKWDSIVSLSEDF--KIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL 186
+ + D L + + LP T + ++ R + + A L+ + +
Sbjct: 243 REGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASA 302
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
FN + GY + +M++ GIV Y I+ ++ G+ E F+E
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
++ L + Y L + K+G EAL F D+K G+ Y L+ +
Sbjct: 363 MRAMGLLPDLIT---YNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCR 419
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL--DVVESMKNAKLKISD 364
+ +++ A +E E+G P+V +LM + + + + M + L+ D
Sbjct: 420 LGDLEEARRFKQEMVEQGC--QPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQ-PD 476
Query: 365 C------ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
C IS ++ G + A ++ E +IS+G VTY ++ C+ A
Sbjct: 477 CFAYNTRISAELILGSTSE-----AFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDA 531
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
++++M G + Y+ ++ + + GR+R+A + M G P+ Y +
Sbjct: 532 YVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHA 591
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ R NL +++M V P++V+Y +I A R ++ + ++E G +
Sbjct: 592 YCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPN 651
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ +++ K EE ++L +M G D H NAL
Sbjct: 652 KYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPD----HCTHNAL 693
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 3/169 (1%)
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F EM G + + ++ R D + A+M G EP++ YN+L+D R
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243
Query: 482 AKNLRQVEKLWKEMERRK--VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDR 539
+ Q KL +EME R P V+Y VI+ R E + + + RM+
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAF 303
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
++ G F++ S +E+ L +M++EG Y++ ++ + +G
Sbjct: 304 TFNPLITGYFARGS-VEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSG 351
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 182/441 (41%), Gaps = 42/441 (9%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTIL 207
P +T + LV V + + A + +V + G+I + +N + GY K +
Sbjct: 218 PSLYTYNFLVNGLVNSMFIESAEKVFEV-MDGGKIVPDTVTYNIMIKGYCKAGKLQKAME 276
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ M+ + D Y +++A Y D + +L+LE + R L+ P H Y ++
Sbjct: 277 KFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPP---HSYSLVIG 333
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L K + EA F M +KG + +IY +LI S
Sbjct: 334 GLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDS------------------------ 369
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
Y + G +E+ + + E MKN + +VNG K ++++
Sbjct: 370 -----------YSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELF 418
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ ++G + YAS+I+ + AE +F EM +KG + Y++++ K
Sbjct: 419 DFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKH 478
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G+I A+ L +M+ +GC+ V+ + L+D + + K W +M + +TP S+
Sbjct: 479 GKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASF 538
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+ + K ++ G + + A M+ K +I+E KL +
Sbjct: 539 RALAIGLCLCGKVARACKILDDLAPMGIIPETAFED-MINTLCKAQRIKEACKLADGIVD 597
Query: 568 EGTKLDERLYHSAMNALRDAG 588
G ++ R+ +NALR AG
Sbjct: 598 RGREIPGRIRTVLINALRKAG 618
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 156/363 (42%), Gaps = 3/363 (0%)
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
LV+ ++K G+++ +++++ +G E++ ++ K +D S + Y L
Sbjct: 171 LVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDP---SLYTYNFLV 227
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ L S A K F M I+ D Y +I + +++ A E F++ E K +
Sbjct: 228 NGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVK 287
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D + L+ E + L + M+ L+I ++ G K+R A V
Sbjct: 288 PDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAV 347
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+E + +GC Y ++I++Y + +A ++F M+ +GF+ V YS +V K
Sbjct: 348 FETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCK 407
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
+GR+ D M L + KG N Y SL+D G+A + E L++EM + D
Sbjct: 408 SGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYC 467
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
Y +I A + + D + + G I++ K + EE +K M
Sbjct: 468 YNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMI 527
Query: 567 SEG 569
+G
Sbjct: 528 DKG 530
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 163/378 (43%), Gaps = 5/378 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T ++I+ ++ K + D ++ NV PD T L+ +C R F +L
Sbjct: 253 PDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSL 312
Query: 175 -LQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L++ EI +++ +GG K V+E M G + Y ++++Y K
Sbjct: 313 YLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSK 372
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G E+ LF K+ + + Y +L + L KSGR + ++ F + KG+ +
Sbjct: 373 NGSMEEAMRLFERMKNEGFEPDAVT---YSVLVNGLCKSGRLDDGMELFDFCRNKGVAIN 429
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
YASLI ++ AE LF+E EKG RD ++ + G +++ L +
Sbjct: 430 AMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFG 489
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M+ + +++G K A+K ++++I +G P ++ ++ C
Sbjct: 490 RMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCG 549
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
++A K+ ++ G A+ M+ K RI++A L + +G E I
Sbjct: 550 KVARACKILDDLAPMGIIP-ETAFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRT 608
Query: 474 SLMDMHGRAKNLRQVEKL 491
L++ +A N V KL
Sbjct: 609 VLINALRKAGNSDLVIKL 626
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 160/372 (43%), Gaps = 40/372 (10%)
Query: 223 CYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFF 282
C+ ++E D K+ +F E K R L T + + L S G G E L +
Sbjct: 152 CHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANS---LIKSFGNLGLVEELLWVW 208
Query: 283 RDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
R MKE GI DPS+Y + L +F E+ EK
Sbjct: 209 RRMKENGI--DPSLYT------YNFLVNGLVNSMFIESAEK------------------- 241
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
V E M K+ + D ++ I + G+ K A++ + + + P ++T
Sbjct: 242 --------VFEVMDGGKI-VPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKIT 292
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y ++I A + +++EM+++G + +YS ++ K + +A + M
Sbjct: 293 YMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMN 352
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
KGC NV IY +L+D + + ++ + +L++ M+ PD V+Y+ +++ ++ D
Sbjct: 353 QKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLD 412
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
++ ++ R G I+ ++ K +IE+ L ++M +G D Y++ +
Sbjct: 413 DGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAII 472
Query: 582 NALRDAGLQMQA 593
+AL G QA
Sbjct: 473 DALAKHGKIDQA 484
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 35/230 (15%)
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ S+I A K VF E++ +G A +S++ +G G + + +W+ +MK
Sbjct: 153 HVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMK 212
Query: 462 AKGCEPNVWIYNSLMD-----------------MHG------------------RAKNLR 486
G +P+++ YN L++ M G +A L+
Sbjct: 213 ENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQ 272
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ + +++ME + V PDK++Y T+I A R+FD C+ Y E G I +++
Sbjct: 273 KAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVI 332
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
G K + E + + M +G + + +Y + +++ G +A L
Sbjct: 333 GGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRL 382
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 174/393 (44%), Gaps = 5/393 (1%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+NS + +++ + I + E M A I Y ++ A G+ +K L CK
Sbjct: 49 YNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALEL---CK 105
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ + I+ +L + +A+ +F MK + D +I I
Sbjct: 106 KMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIG 165
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCI 366
+ A ELF E+ P+V +M Y G VE + + M +K +
Sbjct: 166 QCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVA 225
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
+++ ++ R + A+ ++ + G P V+Y S++NAY R A KA +VF +M+
Sbjct: 226 YNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK 285
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+ V+Y++++ YG G +++A+ L+ +M+ G +P+V ++L+ GR + +
Sbjct: 286 KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQIT 345
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
++E + + R + + V+Y + I +Y +++ ++ Y R + D I++
Sbjct: 346 RIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILI 405
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
SKL + E ++ +DM + +Y S
Sbjct: 406 SGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSS 438
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/500 (20%), Positives = 194/500 (38%), Gaps = 37/500 (7%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P+ LI ++ +W +++ ED + P T + ++ +C A +K A
Sbjct: 43 KPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALE 102
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L + +G L+ N + Y I +E MK A + D+ I+
Sbjct: 103 LCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLV 162
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
KIG + LF + R+ P Y + S G+ F M +G+
Sbjct: 163 KIGQCGEAIELFNSMRERRTKCPP-DVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKP 221
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ Y SL+ ++AS + A +F ++ G+ D L+ Y EK +V
Sbjct: 222 NIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVF 281
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
MK K + A+++ + AV + ++ G P V+ ++++ A R
Sbjct: 282 NKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRC 341
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
++ E + + +G D VAY+S + Y G A+ L M+ +P+ Y
Sbjct: 342 RQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTY 401
Query: 473 N-----------------------------------SLMDMHGRAKNLRQVEKLWKEMER 497
N SL+ + + L + E + M++
Sbjct: 402 NILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKK 461
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
PD ++YTT+I AYN + + E +NG D I ++ F+K + E
Sbjct: 462 SGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPER 521
Query: 558 LVKLLQDMKSEGTKLDERLY 577
+++L++ MK + L+++ Y
Sbjct: 522 VLQLMEFMKKKSIPLNQKSY 541
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 173/400 (43%), Gaps = 6/400 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + S L+ + Q ++ A + +N+ KK +P K + LI + V
Sbjct: 256 PDIVSYTSLLNAYGRSAQPEK-AREVFNKMKK-NSCKPNKVSYNALIDAYGSAGMLKEAV 313
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L + + + PD + S L+A+C R R+ T+L+ + G ++ +A+NS + Y
Sbjct: 314 GLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSY 373
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
Y + +Y M+ + + D+ Y ++ K+G + F + K+ ST
Sbjct: 374 LSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSST- 432
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+Y L S K G+ EA F MK+ G D Y +LI ++ + K A +L
Sbjct: 433 --KEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDL 490
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
FKE E G+ D +C L+ + + G E+ L ++E MK + ++ I+ +
Sbjct: 491 FKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTM 550
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
R + A ++ E L S T ++N + K+F +M +
Sbjct: 551 IRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLST 610
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
Y+ ++ G+ R + ++ M+ G P ++++ +++
Sbjct: 611 YAVVLRNLLVVGKWRKYIEVLQWMEDSGVHPTLYMFQNVL 650
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 135/311 (43%), Gaps = 8/311 (2%)
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
IY +I +A +V A LF E +E D ++ L+ + G ++++E M
Sbjct: 13 IYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDM 72
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
A + + ++N + A+++ +++ G P VT+ +++A A Y
Sbjct: 73 LRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQY 132
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK--GCEPNVWIYN 473
SKA F M+ + ++ K G+ +A+ L M+ + C P+V Y
Sbjct: 133 SKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYT 192
Query: 474 SLMD---MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
S+M ++G+ +N + + L M V P+ V+Y +++ AY + +N
Sbjct: 193 SIMHSYCIYGQVENCKAIFDL---MVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
+ NG D ++ + + +Q E+ ++ MK K ++ Y++ ++A AG+
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGML 309
Query: 591 MQAQWLQQNFE 601
+A L E
Sbjct: 310 KEAVGLLHEME 320
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/488 (21%), Positives = 208/488 (42%), Gaps = 38/488 (7%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP + L+ LVQS + +I VLPD T + + + R + A
Sbjct: 180 RPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVE 239
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
++ G E+ L+A+++ M Y + + E ++ G+ + Y +++ Y
Sbjct: 240 FVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYC 299
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K G E+ + E K + Y ++ + + GR +A + +M++ GI
Sbjct: 300 KDGRMEEAERVVKEMK--ETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHV 357
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ +Y ++I + ++ +++ +E E+ GM D L+ Y EG + K ++
Sbjct: 358 NLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMC 417
Query: 353 ESMK-----------NAKLK-------ISDC----------------ISCA-IVNGFSKR 377
M N LK I D ISC+ +++G K
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA 477
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A+ ++++ +++G +T+ ++IN C+I ++AE++ M++ + Y
Sbjct: 478 GKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTY 537
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++ Y K G++ A L+ KM+ G P+V ++NS + H AK +V + EM
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSA 597
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
R ++P+ V+Y +I+ + + Y E NG + I ++ F K +++E
Sbjct: 598 RGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDE 657
Query: 558 LVKLLQDM 565
+LQ +
Sbjct: 658 ANLVLQKL 665
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/474 (18%), Positives = 191/474 (40%), Gaps = 18/474 (3%)
Query: 143 FKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE--------------IALLA 188
F++ P + ++L+ RAR+F A LL E + ++
Sbjct: 91 FRLAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVS 150
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
F+ + + S + V++ M G +++ + GD A ++ + +
Sbjct: 151 FDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMR 210
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ F+ I+ + + GR +A++F +M+ G+ + Y +++ + +
Sbjct: 211 IAGVLPDEFTV---AIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ A + + + KG+ + LV Y ++G +E+ VV+ MK + D ++
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAY 327
Query: 369 AI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+ +NG+ +R A +V ++ G Y ++IN C++ + +KV EM+
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED 387
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G +Y++++ Y + G +R A + M G YN+L+ +
Sbjct: 388 VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDD 447
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+LW M +R V P+++S +T++ +A + + + + E G + ++
Sbjct: 448 ALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVIN 507
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
K+ ++ E +LL MK D Y + + G A L E
Sbjct: 508 GLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKME 561
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 151/347 (43%), Gaps = 14/347 (4%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
FNS + G+ ++ ++ +M + G+ + Y ++ + K G+ + L+ E
Sbjct: 572 FNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMV 631
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ ++ F + L K G+ EA + + ++ CS ++I
Sbjct: 632 NNGMNPNVF---ICSALMSCFYKEGKVDEANLVLQKLVNIDMIPG--------CSISTIE 680
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI-EEGLVEKTLDVVESMKNAKLKISDCIS 367
K++ + A+ G V +++ + + G + + ES++N + +
Sbjct: 681 IDKISHVVDTIAD--GNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTY 738
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++++G + A + + ++S G P +TY S+I C+ S+A +F ++Q
Sbjct: 739 SSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQS 798
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
KG + Y++++ Y K G+ +A L KM +G +P V Y+ L+ + +
Sbjct: 799 KGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEE 858
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
KL +M V P+ ++Y T+I Y ++ + K Y+E + G
Sbjct: 859 AIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRG 905
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 119/271 (43%), Gaps = 42/271 (15%)
Query: 253 DSTPFSTH-MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
D P S + M+ ++ L KSGR +A F ++ K L D Y+SLI A+
Sbjct: 693 DGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAA----- 747
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
G +++ + + M +A L + +++
Sbjct: 748 ------------------------------SGSIDEAFSLRDVMLSAGLTPNIITYNSLI 777
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
G K AV ++ +L S+G P +TY ++I+ YC+ ++A K+ +M ++G
Sbjct: 778 YGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQ 837
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
V+ YS ++ G + +A+ L+ +M +PN Y +L+ + ++ N+ ++ KL
Sbjct: 838 PTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKL 897
Query: 492 WKEMERRKVTPD------KVSYTTVISAYNR 516
+ EM R + P K S V++ +NR
Sbjct: 898 YDEMHIRGLLPTNWIGNWKRSDPVVVNNWNR 928
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 88/476 (18%), Positives = 188/476 (39%), Gaps = 30/476 (6%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
+I L + + + + + ++ + + PD ++ + L+ R + A + ++ + +G
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424
Query: 183 EIAL-LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
A L +N+ + G+ LH + ++ M G+ + +++ +K G +E+
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
L+ E +R L + + + + L K GR EA + MKE D Y +L
Sbjct: 485 NLWKETLARGLAKNVIT---FNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLF 541
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + ++ A L + E G E+ + + K D+ M L
Sbjct: 542 DGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLS 601
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP---------------GQVTYASII 406
+ A++ G+ K A +Y ++++ G P G+V A+++
Sbjct: 602 PNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLV 661
Query: 407 ---------NAYCRIALY--SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
C I+ K V + V ++ ++ K+GRI DA
Sbjct: 662 LQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKS 721
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L ++ K P+ + Y+SL+ + ++ + L M +TP+ ++Y ++I
Sbjct: 722 LFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLC 781
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
++ + V +N+ + G + ++ + K + E KL Q M EG +
Sbjct: 782 KSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQ 837
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 4/207 (1%)
Query: 121 KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
++I L +S + SL E + LPD T S L+ C + A +L V ++
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLS 763
Query: 181 DGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
G ++ +NS + G K + ++ K++S GI + Y +++ Y K G + +
Sbjct: 764 AGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTE 823
Query: 240 VAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
L + + T + Y IL L G EA+K M E + + Y +
Sbjct: 824 AFKLKQKMVEEGIQPTVIT---YSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCT 880
Query: 300 LICSFASITEVKLAEELFKEAEEKGML 326
LI + ++ +L+ E +G+L
Sbjct: 881 LIHGYIKSGNMEEISKLYDEMHIRGLL 907
>gi|410110125|gb|AFV61142.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
micromera]
Length = 434
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 166/355 (46%), Gaps = 7/355 (1%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 1 GLFDEMRQRALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLI 57
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ A +F + G D ++ ++ + L + ++ MK A +
Sbjct: 58 ELSRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVM 117
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++ + + + + A+ V+ ++ C T +I+ Y ++ + +A+K+
Sbjct: 118 PNTTSYSTLLTMYXENKKFLEALSVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M++ G + VV+Y++++ +YG +A+ L M+ K E NV YNS++ ++G+
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGK 237
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ +
Sbjct: 238 TLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQIL 297
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M+ + + + +LL ++K + D +A++ L AG +A ++
Sbjct: 298 FQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYV 348
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 165/376 (43%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K D K ++F +L + F+ + Y + +
Sbjct: 39 QKMEQDQVPGDLVLYSNLIELSRKXCDYSKAISIF-----SRLKRSGFTPDLVAYNAMIN 93
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +MK G++ + + Y++L+ + + A +F E E
Sbjct: 94 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYXENKKFLEALSVFSEMREIKCXL 153
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 154 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 213
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + VTY S+I Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 214 RLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKX 273
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + ++ +++ + RA + ++L E++R PD +
Sbjct: 274 GKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKR----PDNIPR 329
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ + SK + ++++ M+
Sbjct: 330 DTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVIEVFDKMRG 389
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 390 LGYFPDSNVIAVVLNA 405
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 192/428 (44%), Gaps = 18/428 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVA----SCVRARKFKI 170
P++ T LI + + +D+ +S + + V D S L+ C ++ I
Sbjct: 13 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKXCDYSKAISI 72
Query: 171 ANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ L + T L+A+N+ + + K ++ + +MK+AG++ ++ Y ++
Sbjct: 73 FSRLKRSGFTPD---LVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTM 129
Query: 231 YYKIGDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
Y + + ++F E + K LD T + I+ D G+ G A EA K F M++
Sbjct: 130 YXENKKFLEALSVFSEMREIKCXLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKM 184
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI + Y +L+ + A LF+ + K + ++ ++++Y + EK
Sbjct: 185 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKA 244
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
++++ M++ ++ + I++ + K A ++++L S G Q+ + ++I A
Sbjct: 245 NNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 304
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
Y R L + A+++ E+++ + + + + GRI +A ++ + G +
Sbjct: 305 YERAGLVAHAKRLLHELKRPD----NIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKD 360
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ ++ ++ + + K V +++ +M PD V++AY + +EFD Y
Sbjct: 361 ITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYM 420
Query: 529 EFRMNGGV 536
E + G V
Sbjct: 421 EMQEVGCV 428
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 142/355 (40%), Gaps = 47/355 (13%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA- 171
F P+ +I ++K + SL + K V+P+ + S L+ +KF A
Sbjct: 81 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYXENKKFLEAL 140
Query: 172 ------------------NTLLQVFITDG-----------------EIALLAFNSAMGGY 196
N ++ V+ G E ++++N+ + Y
Sbjct: 141 SVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 200
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
++ I ++ M+ I + Y ++ Y K + EK L E +SR ++
Sbjct: 201 GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNS 260
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y + GK G+ A F+ ++ G+ D ++ ++I ++ V A+ L
Sbjct: 261 IT---YSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 317
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E L+ P+ + ++I G +E+ V +A + +++
Sbjct: 318 LHE------LKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 371
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
SK + Y ++V++++ G P A ++NAY ++ + KA V++EMQ+ G
Sbjct: 372 SKYKKYSNVIEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVG 426
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 84/195 (43%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q + G E + +++ + + K ++++K++S+G+ +D + ++
Sbjct: 244 ANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTMIV 303
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P T ++ L +GR EA FR + G
Sbjct: 304 AYERAGLVAHAKRLLHELK--RPDNIPRDTAIH-----ILAGAGRIEEATYVFRQAIDAG 356
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I + + E+F + G D V ++ Y + +K
Sbjct: 357 EVKDITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKAN 416
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 417 DVYMEMQEVGCVFSD 431
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/488 (21%), Positives = 208/488 (42%), Gaps = 38/488 (7%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP + L+ LVQS + +I VLPD T + + + R + A
Sbjct: 180 RPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVE 239
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
++ G E+ L+A+++ M Y + + E ++ G+ + Y +++ Y
Sbjct: 240 FVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYC 299
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K G E+ + E K + Y ++ + + GR +A + +M++ GI
Sbjct: 300 KDGRMEEAERVVKEMK--ETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHV 357
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ +Y ++I + ++ +++ +E E+ GM D L+ Y EG + K ++
Sbjct: 358 NLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMC 417
Query: 353 ESMK-----------NAKLK-------ISDC----------------ISCA-IVNGFSKR 377
M N LK I D ISC+ +++G K
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA 477
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A+ ++++ +++G +T+ ++IN C+I ++AE++ M++ + Y
Sbjct: 478 GKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTY 537
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
++ Y K G++ A L+ KM+ G P+V ++NS + H AK +V + EM
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSA 597
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
R ++P+ V+Y +I+ + + Y E NG + I ++ F K +++E
Sbjct: 598 RGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDE 657
Query: 558 LVKLLQDM 565
+LQ +
Sbjct: 658 ANLVLQKL 665
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/474 (18%), Positives = 191/474 (40%), Gaps = 18/474 (3%)
Query: 143 FKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE--------------IALLA 188
F++ P + ++L+ RAR+F A LL E + ++
Sbjct: 91 FRLAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVS 150
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
F+ + + S + V++ M G +++ + GD A ++ + +
Sbjct: 151 FDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMR 210
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ F+ I+ + + GR +A++F +M+ G+ + Y +++ + +
Sbjct: 211 IAGVLPDEFTV---AIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ A + + + KG+ + LV Y ++G +E+ VV+ MK + D ++
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAY 327
Query: 369 AI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
+ +NG+ +R A +V ++ G Y ++IN C++ + +KV EM+
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED 387
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G +Y++++ Y + G +R A + M G YN+L+ +
Sbjct: 388 VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDD 447
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+LW M +R V P+++S +T++ +A + + + + E G + ++
Sbjct: 448 ALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVIN 507
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
K+ ++ E +LL MK D Y + + G A L E
Sbjct: 508 GLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKME 561
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 177/430 (41%), Gaps = 46/430 (10%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTI 206
V P+ +CS L+ +A K + A L + + G ++ FN+ + G K+
Sbjct: 460 VAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAE 519
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
+ ++MK DS Y + + Y K+G + A L K L P S M+
Sbjct: 520 ELLDRMKELRCPPDSLTYRTLFDGYCKLG--QLGTATHLMNKMEHLGFAP-SVEMFNSFI 576
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ + + +M +G+ + Y +LI + + A L+ E GM
Sbjct: 577 TGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMN 636
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKL------------KISDCISC------ 368
+ +C L+ + +EG V++ V++ + N + KIS +
Sbjct: 637 PNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNP 696
Query: 369 --------AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEK 420
I+ G K A ++E L ++ +P TY+S+I+ +A
Sbjct: 697 HSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFS 756
Query: 421 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHG 480
+ M G ++ Y+S++ K+G++ A+ L K+++KG PN YN+L+D +
Sbjct: 757 LRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYC 816
Query: 481 R------AKNLRQ--VE--------KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+ A L+Q VE KL +M V P+ ++Y T+I Y ++ +
Sbjct: 817 KEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEIS 876
Query: 525 KFYNEFRMNG 534
K Y+E + G
Sbjct: 877 KLYDEMHIRG 886
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/474 (18%), Positives = 187/474 (39%), Gaps = 30/474 (6%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
+I L + + + + + ++ + + PD ++ + L+ R + A + ++ + +G
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424
Query: 183 EIAL-LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
A L +N+ + G+ LH + ++ M G+ + +++ +K G +E+
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
L+ E +R L + + + + L K GR EA + MKE D Y +L
Sbjct: 485 NLWKETLARGLAKNVIT---FNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLF 541
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + ++ A L + E G E+ + + K D+ M L
Sbjct: 542 DGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLS 601
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP---------------GQVTYASII 406
+ A++ G+ K A +Y ++++ G P G+V A+++
Sbjct: 602 PNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLV 661
Query: 407 ---------NAYCRIALY--SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
C I+ K V + V ++ ++ K+GRI DA
Sbjct: 662 LQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKS 721
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
L ++ K P+ + Y+SL+ + ++ + L M +TP+ ++Y ++I
Sbjct: 722 LFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLC 781
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
++ + V +N+ + G + ++ + K + E KL Q M EG
Sbjct: 782 KSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 149/351 (42%), Gaps = 36/351 (10%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
FNS + G+ ++ ++ +M + G+ + Y ++ + K G+ + L+ E
Sbjct: 572 FNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMV 631
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ ++ F + L K G+ EA + + ++ CS ++I
Sbjct: 632 NNGMNPNVF---ICSALMSCFYKEGKVDEANLVLQKLVNIDMIPG--------CSISTIE 680
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI-EEGLVEKTLDVVESMKNAKLKISDCIS 367
K++ + A+ G V +++ + + G + + ES++N + +
Sbjct: 681 IDKISHVVDTIAD--GNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTY 738
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++++G + A + + ++S G P +TY S+I C+ S+A +F ++Q
Sbjct: 739 SSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQS 798
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG----------------CEPNVWI 471
KG + Y++++ Y K G+ +A L KM +G +PN
Sbjct: 799 KGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYIT 858
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD------KVSYTTVISAYNR 516
Y +L+ + ++ N+ ++ KL+ EM R + P K S V++ +NR
Sbjct: 859 YCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGNWKRSDPVVVNNWNR 909
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 117/540 (21%), Positives = 217/540 (40%), Gaps = 41/540 (7%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
VP FD+ +++ +E A + + + +K F P+ + L+ L + +
Sbjct: 179 NVCVPGFGVFDALFSALIELGMLEE-ASECFLKMRKFRVF-PKPRSCNALLHRLSKVGRG 236
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSA 192
D +D + T + ++ + ++A +L G ++ +NS
Sbjct: 237 DLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSL 296
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G+ KL + I ++E+MK A D Y ++ + K K E K+ L
Sbjct: 297 IDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL 356
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---CSFASITE 309
+ Y D+ K G EA+KFF DM+ + + Y SLI C ++ E
Sbjct: 357 KPNVVT---YSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAE 413
Query: 310 -VKLAEELF------------------------KEAEE-------KGMLRDPEVCLKLVL 337
+KL EE+ KEAEE G+ + E LV
Sbjct: 414 ALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVH 473
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
+I+ +E D+++ MK +K + I+ G A + ++ G
Sbjct: 474 GFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINT 533
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
V Y ++++AY + ++A + EM G V Y +++ K+G +++AM
Sbjct: 534 NAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHF 593
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+M G +PNV +Y +L+D + +KL+ EM + + PDK++YT +I +
Sbjct: 594 GRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKH 653
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ + G +D ++ S Q+++ LL +M +G DE +Y
Sbjct: 654 GNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVY 713
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/475 (20%), Positives = 203/475 (42%), Gaps = 9/475 (1%)
Query: 98 ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSR 157
E+A + + K+ F P+ T LI + D + + E K + PD T +
Sbjct: 272 EMARSLFTQMKE-AGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNA 330
Query: 158 LVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAG 216
L+ + + A L +G + ++ +++ + + K M I + M+
Sbjct: 331 LINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVA 390
Query: 217 IVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
+ + Y +++A K G+ + L E + + Y L D L + GR
Sbjct: 391 LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGI---KLNVVTYTALLDGLCEEGRMK 447
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
EA + FR M G+ + Y +L+ F E++ A+++ KE +EK + P++ L
Sbjct: 448 EAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI--KPDLLLYGT 505
Query: 337 LMY--IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
+++ E +E+ ++ +K + + + I +++ + K A+ + E+++ G
Sbjct: 506 ILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLG 565
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
I +VTY ++I+ C+ L +A F M + G V Y+++V K A
Sbjct: 566 LIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAK 625
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L +M KG P+ Y +L+D + + NL++ L M + D +YT +I
Sbjct: 626 KLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGL 685
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ + + +E G + D + ++ + L +++E ++L +M G
Sbjct: 686 SHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 740
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 179/419 (42%), Gaps = 71/419 (16%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL------------ 300
D P +T + + +L + GRA +AL R M G + D +Y ++
Sbjct: 174 DRVPPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAE 233
Query: 301 --------------------------ICSFASITEV-KLAEELF---------------- 317
+C + E +L + +
Sbjct: 234 AATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLR 293
Query: 318 -----KEAEEK-GML-RDPEVCLKLVLMYIE----EGLVEKTLDVVESMKNAKLKISDCI 366
++A+E ML R PEV + ++ I EG + + ++ E M +
Sbjct: 294 GLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHT 353
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
+++G K +AV++ +++ +GC P VTY+++++++CR ++ A + +M
Sbjct: 354 YNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMS 413
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
KGF Y+ ++ GK G++ +AM LV +MK++GC+P++ YN+++ +
Sbjct: 414 AKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMD 473
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ E ++ + V + ++Y T+I A + + ++ NE ++G +D ++
Sbjct: 474 EAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLI 533
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG-----LQMQAQWLQQNF 600
K ++ + LL++M ++G K + Y+ +N L AG L++ + L Q
Sbjct: 534 KALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGL 592
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 198/492 (40%), Gaps = 29/492 (5%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T + R L + + ++L + +PDA ++ + V A TL
Sbjct: 178 PTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATL 237
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKL-HMYYSTILVYEKMKSA--------GIVLDSGCY 224
L + G A + FN + G L H+ + LV M G +L C
Sbjct: 238 LDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCR 297
Query: 225 C-QIMEAYYKIGDSEKVAALFLECKSR------KL------------DSTPFSTHMYKIL 265
Q EAY +G +V + L R KL P H Y IL
Sbjct: 298 TRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNIL 357
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
L K GR A++ +M+EKG + Y++L+ SF A + + KG
Sbjct: 358 MHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGF 417
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
+ + ++ ++G +++ + +V+ MK+ K C I+ A
Sbjct: 418 SMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEH 477
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++ L+ +G + +TY ++I+A + + ++ EM G VV+Y+ ++
Sbjct: 478 IFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALC 537
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K G + +M L+ +M KG +PN + YN L++ +A +R +L KEM + +TPD V
Sbjct: 538 KEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIV 597
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y T+I+ + + + D I++ K+ +++ LL
Sbjct: 598 TYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKA 657
Query: 566 KSEGTKLDERLY 577
S G +ER +
Sbjct: 658 VSGGIVPNERTW 669
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/443 (20%), Positives = 188/443 (42%), Gaps = 53/443 (11%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTC--SRLVASCVRARKFKIAN 172
P T L+R L ++++ D E + + +P+ + + ++ C+ K A
Sbjct: 283 PSVVTYGFLLRGLCRTRQAD------EAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARAT 336
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L ++ + G + +N M G KL S + + ++M+ G + Y ++ ++
Sbjct: 337 ELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSF 396
Query: 232 YKIGDSEKVAALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
+ G + A+ + K ++S ++ +Y +LGK G+ EA++ ++MK +G
Sbjct: 397 CRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIY-----ALGKDGKLDEAMRLVQEMKSQG 451
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
D Y ++I + ++ AE +F E+G+ + G+ TL
Sbjct: 452 CKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGV--------------VANGITYNTL 497
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWA-AVKVYEQLISQGCIPGQVTYASIINA 408
+ ++ ++ G W +++ +++ GC V+Y +I A
Sbjct: 498 --IHALLHS--------------------GRWQEGLRLANEMVLHGCPLDVVSYNGLIKA 535
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
C+ ++ + EM KG +Y+ ++ K G++RDA+ L +M +G P+
Sbjct: 536 LCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPD 595
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ YN+L++ + L +++ V PD V+Y +IS + + R D +
Sbjct: 596 IVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLD 655
Query: 529 EFRMNGGVIDRAIAGIMVGVFSK 551
+ G V + G+MV F +
Sbjct: 656 KAVSGGIVPNERTWGMMVQNFVR 678
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 200/463 (43%), Gaps = 50/463 (10%)
Query: 112 EFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
+FR E +KLL R ++ K++ + E PD C++L+ + + A
Sbjct: 75 DFR-ETHLMKLLNRS-CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKA 132
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ ++++ + E + A+N+ + G+ K++ + V +MK+ G + D Y IM
Sbjct: 133 SRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTY-NIMIG- 190
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ + K+ LD+ + Y IL ++ G EA+K +M +G+L
Sbjct: 191 -SLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLL 249
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
D Y ++I +GM + EG+VE+ ++
Sbjct: 250 PDMYTYNAII---------------------RGMCK--------------EGMVERAAEL 274
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ S+ + + D IS I+ +G W K+ ++ S+GC P +VTY+ +I++ C
Sbjct: 275 ITSLTSKGCE-PDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLC 333
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
R +A V M +K +Y +++ K GR+ A+ ++ M + GC P++
Sbjct: 334 RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIV 393
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY----NRAREFDMCVKF 526
YN+++ + N Q +++ ++ P+ SY T+ISA +R+R M
Sbjct: 394 NYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAM 453
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
++ G D ++ + +EE + LL DM+ G
Sbjct: 454 ISK----GIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 492
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 167/367 (45%), Gaps = 37/367 (10%)
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE---DPSIYA-- 298
FLEC K TP ILC L K F+ ++ + E ILE +P ++A
Sbjct: 100 FLECLVNK-GYTPDV-----ILCTKLIKGFFNFKNIEKASRVME--ILESHTEPDVFAYN 151
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRD--------PEVC----LKLVLMYIEEGLVE 346
++I F + +++ A ++ + +G L D +C L L L +++ L++
Sbjct: 152 AVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLD 211
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
+ V + + I IV G G A+K+ E+++++G +P TY +II
Sbjct: 212 NCMPTV-------ITYTILIEATIVEG-----GINEAMKLLEEMLARGLLPDMYTYNAII 259
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
C+ + +A ++ + KG + V++Y+ ++ + G+ + LVA+M ++GCE
Sbjct: 260 RGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 319
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
PN Y+ L+ R + + + K M +++TPD SY +ISA + D+ +
Sbjct: 320 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 379
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRD 586
+ NG + D ++ K + +++ ++ G + Y++ ++AL
Sbjct: 380 MDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 439
Query: 587 AGLQMQA 593
G + +A
Sbjct: 440 CGDRSRA 446
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 180/432 (41%), Gaps = 9/432 (2%)
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
+SH + PD +++ + G K Q E A N K F P+ T ++I L
Sbjct: 140 ESHTE---PDVFAYNAVISGFCKVNQI-EAATQVLNRMKAR-GFLPDIVTYNIMIGSLCN 194
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLA 188
+K +++ + + N +P T + L+ + + A LL+ + G + +
Sbjct: 195 RRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYT 254
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+N+ + G K M + + S G D Y ++ A+ G ++ L E
Sbjct: 255 YNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMF 314
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
SR + + Y IL SL + GR EA+ + M EK + D Y LI +
Sbjct: 315 SRGCEPNKVT---YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 371
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ LA + G L D ++ + G + L++ ++ +
Sbjct: 372 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYN 431
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++ A+ + +IS+G P ++TY S+I+ CR L +A + +M+Q
Sbjct: 432 TMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQS 491
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
GF V++Y+ ++ K RI DA+ + A+M KGC PN Y L++ G A +
Sbjct: 492 GFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEA 551
Query: 489 EKLWKEMERRKV 500
+L + R V
Sbjct: 552 MELANSLFSRDV 563
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 142/331 (42%), Gaps = 14/331 (4%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
A + MK +G L D Y +I S + ++ LA + + +L D C+ V+
Sbjct: 166 ATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQ-----LLLDN--CMPTVI 218
Query: 338 MY-------IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
Y I EG + + + ++E M L AI+ G K A ++ L
Sbjct: 219 TYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSL 278
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
S+GC P ++Y ++ A+ + + EK+ EM +G + V YS +++ + GRI
Sbjct: 279 TSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRI 338
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
+A+ ++ M K P+ + Y+ L+ + L + M PD V+Y T+
Sbjct: 339 DEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTI 398
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
++A + + ++ +N+ R G + + M+ + ++ M S+G
Sbjct: 399 LAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGI 458
Query: 571 KLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
DE Y+S ++ L GL +A L + E
Sbjct: 459 DPDEITYNSLISCLCRDGLVEEAIGLLDDME 489
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 158/379 (41%), Gaps = 18/379 (4%)
Query: 143 FKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-------LLAFNSAMGG 195
K LPD T + ++ S RK +A T+L + D + L+ GG
Sbjct: 173 MKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGG 232
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
N+ + + E+M + G++ D Y I+ K G E+ A L S+ +
Sbjct: 233 INE------AMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPD 286
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
S Y IL + G+ E K +M +G + Y+ LI S + A
Sbjct: 287 VIS---YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAIS 343
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGF 374
+ K EK + D L+ +EG ++ + +++ M + + D ++ I+
Sbjct: 344 VLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC-LPDIVNYNTILAAL 402
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K A++++ +L GC P +Y ++I+A S+A + M KG D
Sbjct: 403 CKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDE 462
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ Y+S+++ + G + +A+ L+ M+ G P V YN ++ + + + ++ E
Sbjct: 463 ITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAE 522
Query: 495 MERRKVTPDKVSYTTVISA 513
M + P++ +Y +I
Sbjct: 523 MIEKGCRPNETTYILLIEG 541
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 167/353 (47%), Gaps = 6/353 (1%)
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
++G+ LF + ST H + + + G++GR +A+ FR M G++
Sbjct: 225 RLGEINLALGLFERARLEGYGST---VHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVP 281
Query: 293 DPSIYASLICSFA-SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y S+I + A + + + E G++ D L+ + +G+ E +
Sbjct: 282 NVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKL 341
Query: 352 VESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ M + + + D + ++ K A +V+E++ S+ P VTY+++++ Y
Sbjct: 342 LSEMDH-RCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYA 400
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ L A ++ EM+ + V+Y+++V +Y K G + +A+ +M+ G +V
Sbjct: 401 KANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVV 460
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
YN+L+ +G+ +V +L++EM+ R + P+ ++Y+T+I Y + F + Y EF
Sbjct: 461 TYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREF 520
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+M ID ++ K +E + LL M +G K + ++S ++A
Sbjct: 521 KMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKPNVVTFNSIIDA 573
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 136/283 (48%), Gaps = 1/283 (0%)
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
K+ G ++ + +++I + + E+ LA LF+ A +G ++ + G
Sbjct: 205 KQNGRVDKGKLVSAMIGTLGRLGEINLALGLFERARLEGYGSTVHSFSAMISAFGRNGRF 264
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRR-GYWAAVKVYEQLISQGCIPGQVTYAS 404
+D+ SM + + + +I++ +K + VK Y+++I+ G +P ++TY S
Sbjct: 265 PDAVDLFRSMSSWGVVPNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNS 324
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+++ ++ A+K+ EM + V Y++ + K G+I A + +M +K
Sbjct: 325 LLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKR 384
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
PNV Y+++MD + +A L L++EM+ R V D+VSY T++ Y + D +
Sbjct: 385 VWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAI 444
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
+ E +G D ++ + K +E+ +L ++MK+
Sbjct: 445 EKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKA 487
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 163/335 (48%), Gaps = 5/335 (1%)
Query: 153 HTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTIL-VYE 210
H+ S ++++ R +F A L + + G + ++ +NS + K + + ++ Y+
Sbjct: 249 HSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAGAKGEVSFDVVVKFYD 308
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
+M + G++ D Y ++ G E L E R + F+ Y D+L
Sbjct: 309 EMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFT---YNTYLDTLC 365
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
K+G+ A + F +M K + + Y++++ +A ++ A L++E + + + D
Sbjct: 366 KAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRV 425
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
LV +Y + G +++ ++ + M+ + + A+++G+ K Y +++E++
Sbjct: 426 SYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEM 485
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
++ P +TY+++I+ Y + ++ +A V+ E + + VV YS+++ K G +
Sbjct: 486 KARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLM 545
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
++ L+ M KG +PNV +NS++D ++ L
Sbjct: 546 ESSIMLLMAMMEKGIKPNVVTFNSIIDASQQSPTL 580
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 84/448 (18%), Positives = 175/448 (39%), Gaps = 75/448 (16%)
Query: 62 FP-TIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNE--AKKLPEFRPEKS 118
FP ++L R VP+ ++S + K + ++ +Y+E A L P++
Sbjct: 264 FPDAVDLFRSMSSWGVVPNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGL---MPDRL 320
Query: 119 TLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVF 178
T L+ W+ L + ++PD T + + + +A + +A + +
Sbjct: 321 TYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEM 380
Query: 179 ITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
+ ++ +++ M GY K ++ + +YE+MK + LD Y ++ Y K+G+
Sbjct: 381 SSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNL 440
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
++ +CK + Y L GK G E + F +MK + I + Y
Sbjct: 441 DEAIE---KCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTY 497
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
+++I ++ E+F+EA +DV K
Sbjct: 498 STMI-------DMYTKGEMFQEA----------------------------MDVYREFKM 522
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA-----YCRI 412
A+L+I AI++ K +++ + ++ +G P VT+ SII+A
Sbjct: 523 ARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKPNVVTFNSIIDASQQSPTLEY 582
Query: 413 ALYSKAEKVFIEMQQ-------------KGFDKCVVAYSSMVAMYGKTGRIRDA------ 453
+ ++ + ++Q G D+ + + + A K G ++
Sbjct: 583 GVNGSSDAIDYPIEQSSPIVIDGAFQNKPGEDRILKMFEQLAAE--KAGHLKKNRSGRQD 640
Query: 454 ----MWLVAKMKAKGCEPNVWIYNSLMD 477
+WL KM +PNV ++++++
Sbjct: 641 KHCILWLFQKMHELNIKPNVVTFSAILN 668
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/553 (20%), Positives = 222/553 (40%), Gaps = 81/553 (14%)
Query: 109 KLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDF-KIYNVLPDAHTCSRLVASCVRARK 167
K + P + L+I D + F KI++ +PD +C+ L+ V+ K
Sbjct: 93 KSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGK 152
Query: 168 FKIANTLLQVFIT-DGEI-----------------------------------ALLAFNS 191
+IA + + +GE+ ++ +N+
Sbjct: 153 VEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNT 212
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ GY K ++++++K G + Y I+ + K G E V L +E R
Sbjct: 213 LIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERG 272
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
LD S H+Y + D+ K G EA M + G D + Y LI S EV
Sbjct: 273 LD---VSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVH 329
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
AE+L ++A ++G+L + L+ Y ++G + LD++ M K A++
Sbjct: 330 KAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALI 389
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTY----------------------------- 402
+G A+ V +++ +G +P Y
Sbjct: 390 HGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVA 449
Query: 403 ------ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
A++++ + R + +A+K+F +KG D VV Y++M+ Y K G ++DA+
Sbjct: 450 PDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLC 509
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+M P+ + Y++++D + + +L +++ M + P+ V+YT +I+ +
Sbjct: 510 FKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCL 569
Query: 517 AREFDMCVKFYNE---FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ + + K + + R+ V+ I++G F K + + + M E +
Sbjct: 570 SGDINRAEKTFKQMLSLRLKPNVVTYT---ILIGCFCKGVNLTKACSFFEQMLMEKCLPN 626
Query: 574 ERLYHSAMNALRD 586
+ Y+ MN L +
Sbjct: 627 DVTYNYLMNGLTN 639
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 151/334 (45%), Gaps = 8/334 (2%)
Query: 273 GRAFEALKFFRD-MKEKGILEDPSIYASLICSFASITEVKLAEELFKE-AEEKGMLRDPE 330
G AL+F+R +K + D SL+ +V++A +++ E + G + +
Sbjct: 115 GLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYT 174
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
VC+ +V +EG VE ++E + +++G+ K+ A ++++L
Sbjct: 175 VCI-MVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKEL 233
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+G +P TY +IIN +C+ + +K+ +EM ++G D + Y++++ K G
Sbjct: 234 KMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCR 293
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
+A V M GC+P++ YN L+ + + E+L ++ +R + P+KVSYT +
Sbjct: 294 IEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPL 353
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGT 570
I Y + E+ + + G D ++ +++ + + M +G
Sbjct: 354 IHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGV 413
Query: 571 KLDERLYHSAMNALRDAGLQ-----MQAQWLQQN 599
D +Y+ M+ L G + A+ L QN
Sbjct: 414 LPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQN 447
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 146/357 (40%), Gaps = 23/357 (6%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILV 208
PD T + L+ + A + +A T+ + G + +N M G K + ++
Sbjct: 380 PDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVL 439
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+M + D+ +++ + + GD E+ LF + +D Y +
Sbjct: 440 LAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVG---YNAMIKG 496
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
K G +AL F+ M + D Y+++I + + ++ A +F KG +
Sbjct: 497 YCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFG-LMVKGACK- 554
Query: 329 PEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
P V +L+ + G + + + M + +LK + ++ F K A
Sbjct: 555 PNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSF 614
Query: 387 YEQLISQGCIPGQVTYASIINAYCR----IALYSKAEKV--------FIEMQQKGFDKCV 434
+EQ++ + C+P VTY ++N + ++E+ F M G+D+
Sbjct: 615 FEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRA 674
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD---MHGRAKNLRQV 488
+Y+S++ + ++ A+ L KM +KG P+ +L+ + GR+++ V
Sbjct: 675 ASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNV 731
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 90/215 (41%), Gaps = 36/215 (16%)
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM-WLVAKMKAKGCEPNVW--- 470
+S+ E + M+ K A+S +++++ G + A+ + +K C P+V+
Sbjct: 82 FSEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCN 141
Query: 471 -----------------IYNSLMDMHGRAKNLR------------QVEKLWKEMERR--- 498
+Y+ ++D +G N +VE WK +E+R
Sbjct: 142 SLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGR 201
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
P+ V Y T+I Y + + + + E +M G + G ++ F K + E +
Sbjct: 202 GCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVV 261
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
KLL +M G + +Y++ ++A G +++A
Sbjct: 262 DKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEA 296
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 182/405 (44%), Gaps = 12/405 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ ST L+ L ++ + L + +V PD T L+ +A A +
Sbjct: 129 PDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKV 188
Query: 175 LQVFITDGE---IALLAFNSAMGGYNKL-HMYYSTILVYEKMKSA-GIVLDSGCYCQIME 229
L + G ++ N+ + G K+ + + + V E+M+ G ++ Y + +
Sbjct: 189 LDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLAD 248
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
A ++GD + +A +E + K TP M I+ L + GR AL FFR+ K
Sbjct: 249 ACCRVGDID-MACQIVE-RMEKEGVTPNVITMNTIV-GGLCRVGRVGAALDFFRE-KRTT 304
Query: 290 ILE---DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
LE + Y++L+ +F V LA ELF E ++G D + ++ + G +
Sbjct: 305 WLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLV 364
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
++ SMK A K+ ++ GF +++ A +++E++ G P TY +++
Sbjct: 365 DACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLL 424
Query: 407 NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE 466
+ C+ +S +++ M G VV + ++V Y K G+ +A+ + M +
Sbjct: 425 SCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQ 484
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVI 511
PN IYN+L+D +++ + KL+ EM V + +Y ++
Sbjct: 485 PNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALL 529
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 145/329 (44%), Gaps = 27/329 (8%)
Query: 277 EALKFFRDMKEKGI-LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
+A F RD G D S + SL+ + ++ ELF E + P++
Sbjct: 113 DAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASV--KPDIVTYG 170
Query: 336 VLM--YIEEGLVEKTLDVVESMKNAKLKISD--CISCAIVNGFSKRRGYWAAVKVYEQLI 391
+L+ + GLV L V++ M + + I +V+G K A+ ++ +
Sbjct: 171 ILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERM 230
Query: 392 SQ--GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
Q GC P VTY + +A CR+ A ++ M+++G V+ +++V + GR
Sbjct: 231 RQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGR 290
Query: 450 IRDAM---------WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
+ A+ WL +A+G N Y++L+ N+ +L+ EM +
Sbjct: 291 VGAALDFFREKRTTWL----EARG---NAVTYSTLVSAFLHCNNVALAMELFHEMADQGY 343
Query: 501 TPDKVSYTTVISAYNRA-REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
PD V Y T+IS +A R D C + G +DR I++G F + ++ E
Sbjct: 344 PPDAVMYFTMISGLTQAGRLVDAC-NIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAH 402
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+L ++MK G + D Y++ ++ L AG
Sbjct: 403 QLFEEMKGAGLQPDVYTYNTLLSCLCKAG 431
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/489 (19%), Positives = 200/489 (40%), Gaps = 53/489 (10%)
Query: 115 PEKSTL-KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
P S L KLL R+ S D+ L + PD T + L+++ RA +
Sbjct: 96 PSASLLSKLLARF---SSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLR---G 149
Query: 174 LLQVFITDGEIA----LLAFNSAMGGYNKLHMYYSTILVYEKMKSAG--IVLDSGCYCQI 227
+ ++F + E + ++ + + K + + V ++M S G + D +
Sbjct: 150 MTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTV 209
Query: 228 MEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
++ KIG + A +F++ + R++ +T Y L D+ + G A + M++
Sbjct: 210 VDGLCKIGRLQD-AIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEK 268
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
+G+ + +++ + V A + F+E K
Sbjct: 269 EGVTPNVITMNTIVGGLCRVGRVGAALDFFRE---------------------------K 301
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+E+ NA +V+ F A++++ ++ QG P V Y ++I+
Sbjct: 302 RTTWLEARGNA------VTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMIS 355
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+ A + M++ GF AY+ ++ + + R+ +A L +MK G +P
Sbjct: 356 GLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQP 415
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
+V+ YN+L+ +A + V++L M P V++ T++ Y +A + D +K +
Sbjct: 416 DVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIF 475
Query: 528 ---NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
E R+ + I ++ K +++ +KL +M+ + Y++ + L
Sbjct: 476 RSMGEARIQPNTV---IYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGL 532
Query: 585 RDAGLQMQA 593
+D + +A
Sbjct: 533 QDKNMPEKA 541
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 10/263 (3%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE--FRPEKSTLKL 122
+EL + Q PDA + + + G+ Q L D N A + + F+ ++ +
Sbjct: 332 MELFHEMADQGYPPDAVMYFTMISGLT---QAGRLV-DACNIAASMKKAGFKLDRKAYNI 387
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
LI + K+ L E+ K + PD +T + L++ +A F + LL I DG
Sbjct: 388 LIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDG 447
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ +++ F + + GY K + ++ M A I ++ Y +++ K + +
Sbjct: 448 CQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAI 507
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + ++ P + Y L L +A + MKE+ D L+
Sbjct: 508 KLFDEMRE---NNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLM 564
Query: 302 CSFASITEVKLAEELFKEAEEKG 324
I E + + ++ +EKG
Sbjct: 565 EWLPEIGETERLKCFMEQRDEKG 587
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 119/529 (22%), Positives = 220/529 (41%), Gaps = 14/529 (2%)
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
D VPD +S + + K + E A+ + + K++ P T L+ L +
Sbjct: 579 DMIENNCVPDVLVVNSLIDTLYKAGRGDE-AWQIFYQLKEM-NLEPTDGTYNTLLAGLGR 636
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLA 188
K ++ L E+ N P+ T + ++ + A +L T G I L +
Sbjct: 637 EGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSS 696
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK----VAALF 244
+N+ + G K Y ++ +MK ++ D C I+ ++ KIG ++ + F
Sbjct: 697 YNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKEYF 755
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
L+ S K D + + M IL K ++++F + GI D LI
Sbjct: 756 LQPGS-KTDRSSCHSLMEGIL-----KKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHL 809
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ A EL K+ + G+ L+ ++E L++ + MK +
Sbjct: 810 CKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDE 869
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++ K +KV E++ +G VTY +II+ + +A ++
Sbjct: 870 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 929
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+ +GF Y ++ K GRI DA L +M GC+ N IYN L++ H A N
Sbjct: 930 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 989
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+V L+++M + + PD SYT +I +A + + + ++ + G D +
Sbjct: 990 TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNL 1049
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
++ K ++EE V L +M+ +G + Y+S + L AG +A
Sbjct: 1050 LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEA 1098
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 184/424 (43%), Gaps = 16/424 (3%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
F + GG S + MK AGIVL++ Y ++ K G + ++ K
Sbjct: 207 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY---K 263
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC--SFAS 306
+D S Y +L + GK L R+M+ G+ P++Y+ IC
Sbjct: 264 VMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGV--KPNVYSYTICIRVLGQ 321
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKISD 364
A + E E +G P+V VL+ + + G + DV MK + K
Sbjct: 322 ARRFDEAYRILAEMENEGC--KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDR 379
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+++ F+ + ++++ + + G V Y ++I+A C++ +A ++F E
Sbjct: 380 VTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDE 439
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M+QKG +Y+S+++ + K R DA+ L M G +PN + + ++ +G++
Sbjct: 440 MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGE 499
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+ + ++ M+ + + PD V+ V+ ++ M + ++E + G D +
Sbjct: 500 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTM 559
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA-----QWLQQN 599
M+ SK S+ +E VK+ DM D + +S ++ L AG +A Q + N
Sbjct: 560 MIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMN 619
Query: 600 FEGT 603
E T
Sbjct: 620 LEPT 623
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 142/304 (46%), Gaps = 3/304 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ KMK + D Y +++ + G+S+ V ++ + K D + Y + D
Sbjct: 366 VFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIW---NAMKADGYNDNVVAYTAVID 422
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+L + GR FEAL+ F +MK+KGI+ + Y SLI F A ELFK + G
Sbjct: 423 ALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKP 482
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ + + Y + G K + E MK+ + A++ G +K A +V+
Sbjct: 483 NGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVF 542
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+L + G P +TY +I + + + +A K+F +M + V+ +S++ K
Sbjct: 543 HELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKA 602
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
GR +A + ++K EP YN+L+ GR +++V L +EM P+ ++Y
Sbjct: 603 GRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITY 662
Query: 508 TTVI 511
T++
Sbjct: 663 NTIL 666
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/463 (20%), Positives = 197/463 (42%), Gaps = 14/463 (3%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ-SKKWDS 135
+PD +++ ++G++K+ + E A+ + + KK+ P+ +TL ++ V+ ++
Sbjct: 691 IPDLSSYNTVIYGLVKEERYNE-AFSIFCQMKKV--LIPDYATLCTILPSFVKIGLMKEA 747
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVR----ARKFKIANTLLQVFITDGEIALLAFNS 191
+ + E F D +C L+ ++ + + A + IT + L
Sbjct: 748 LHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIK 807
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ K + + +K KS G+ L +G Y ++ + LF E K
Sbjct: 808 HLCKQKKALEAHELV---KKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELG 864
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
F+ Y +L D++GKS R E LK +M KG Y ++I ++
Sbjct: 865 CGPDEFT---YNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLE 921
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A +L+ +G P L+ ++ G +E ++ M K + I ++
Sbjct: 922 QAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILL 981
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
NG +++ ++ QG P +Y II+ C+ + F ++ + G +
Sbjct: 982 NGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLE 1041
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
++ Y+ ++ GK+ R+ +A+ L +M+ KG PN++ YNSL+ G+A + K+
Sbjct: 1042 PDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKM 1101
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
++E+ + P+ +Y +I Y+ + D Y + G
Sbjct: 1102 YEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGG 1144
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 173/381 (45%), Gaps = 3/381 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY+ M G+V Y +M A+ K D E V L E ++ + +S Y I
Sbjct: 261 VYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYS---YTICIR 317
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
LG++ R EA + +M+ +G D + LI + A+++F + ++
Sbjct: 318 VLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKP 377
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D + L+ + + G + +++ +MK + A+++ + + A++++
Sbjct: 378 DRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMF 437
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+++ +G +P Q +Y S+I+ + + + A ++F M G + + YGK+
Sbjct: 438 DEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKS 497
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G A+ MK+KG P+V N+++ ++ L ++++ E++ V+PD ++Y
Sbjct: 498 GESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITY 557
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T +I ++A +FD VK + + N V D + ++ K + +E ++ +K
Sbjct: 558 TMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKE 617
Query: 568 EGTKLDERLYHSAMNALRDAG 588
+ + Y++ + L G
Sbjct: 618 MNLEPTDGTYNTLLAGLGREG 638
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 108/253 (42%)
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ G V +V + M+ +K + AI G G +A + G +
Sbjct: 181 DHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAY 240
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TY ++ + +A +V+ M G V YS ++ +GK + +WL+ +M
Sbjct: 241 TYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 300
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+A G +PNV+ Y + + G+A+ + ++ EME PD +++T +I A
Sbjct: 301 EAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRI 360
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ + + + DR ++ F+ + + ++++ MK++G + Y +
Sbjct: 361 SDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAV 420
Query: 581 MNALRDAGLQMQA 593
++AL G +A
Sbjct: 421 IDALCQVGRVFEA 433
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 155/397 (39%), Gaps = 18/397 (4%)
Query: 79 DAKKFDSFLHGMLKDPQTQ---ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
D S + G+LK T+ E A + L +F L LI++L + KK
Sbjct: 763 DRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDF-----FLCPLIKHLCKQKKALE 817
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL----QVFITDGEIALLAFNS 191
L + FK + V + + L+ V IA L ++ E
Sbjct: 818 AHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLD 877
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
AMG ++ + V E+M G Y I+ K E+ L+ S+
Sbjct: 878 AMGKSMRIE---EMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 934
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
TP + Y L D L K+GR +A F +M E G + +IY L+ +
Sbjct: 935 FSPTPCT---YGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTE 991
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
LF++ ++G+ D + ++ + G + L + L+ ++
Sbjct: 992 KVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLI 1051
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+G K + AV ++ ++ +G +P TY S+I + ++A K++ E+ KG+
Sbjct: 1052 DGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWK 1111
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
V Y++++ Y +G A +M GC PN
Sbjct: 1112 PNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1148
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 140/320 (43%), Gaps = 6/320 (1%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSED 142
++S + G++ D ++A + E K+L P++ T LL+ + +S + + ++ + E+
Sbjct: 837 YNSLICGLV-DENLIDIAEGLFAEMKEL-GCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE 894
Query: 143 FKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHM 201
T + +++ V++R+ + A L ++ G + + G K
Sbjct: 895 MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 954
Query: 202 YYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM 261
++ +M G + Y ++ + G++EKV LF + + ++ S
Sbjct: 955 IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS--- 1011
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y I+ D+L K+G+ + L +FR + E G+ D Y LI ++ A LF E +
Sbjct: 1012 YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 1071
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+KG++ + L+L + G + + E + K + A++ G+S
Sbjct: 1072 KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTD 1131
Query: 382 AAVKVYEQLISQGCIPGQVT 401
+A Y ++I GC+P T
Sbjct: 1132 SAYAAYGRMIVGGCLPNSST 1151
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 155/350 (44%), Gaps = 17/350 (4%)
Query: 236 DSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS 295
D + A L CK +L P + H Y +L + K G E + + +MK GI+ +
Sbjct: 206 DGNVMLAKNLFCKMNRLGLVP-NPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAY 264
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE-----KTLD 350
Y LI + + V A ++F E EKG+ C + + GL + +
Sbjct: 265 AYNCLISEYCNDGMVDKAFKVFAEMREKGI-----ACGVMTYNILIGGLCRGKKFGEAVK 319
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+V + L + ++NGF R +AV+++ QL S G P VTY ++I Y
Sbjct: 320 LVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYS 379
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
++ + A + EM+++ V Y+ ++ + + A + + M+ G P+V+
Sbjct: 380 KVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVY 439
Query: 471 IYNSLMD---MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
Y+ L+ +HG N+++ KL+K + + P+ V Y T+I Y + ++
Sbjct: 440 TYSVLLHGLCVHG---NMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLL 496
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
NE +G V + A +G+ + + +E LL M + G K LY
Sbjct: 497 NEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 161/347 (46%), Gaps = 6/347 (1%)
Query: 238 EKVAALFLECKSRK-LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+K +F E KS+ LD+ F M K C++ G + + ++E G+ + I
Sbjct: 141 DKAWWIFNELKSKVVLDAYSFGI-MIKGCCEA----GYFVKGFRLLAMLEEFGLSPNVVI 195
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y +LI V LA+ LF + G++ +P L+ + ++GL + + E+MK
Sbjct: 196 YTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMK 255
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ + + +++ + A KV+ ++ +G G +TY +I CR +
Sbjct: 256 RSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFG 315
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+A K+ ++ + G +V Y+ ++ + ++ A+ L ++K+ G P + YN+L+
Sbjct: 316 EAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLI 375
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+ + +NL L KEME R + P KV+YT +I A+ R + + ++ +G V
Sbjct: 376 AGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLV 435
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
D +++ ++E KL + + + + +Y++ ++
Sbjct: 436 PDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHG 482
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 173/435 (39%), Gaps = 43/435 (9%)
Query: 185 ALLAFNSAMGGYNKL-HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
ALL FN+A Y L H +S + + L SG Q ++ ++L
Sbjct: 22 ALLLFNTAT--YQGLQHTSHSISFILNHL------LSSGMLPQAQSLILRLISGRIPSSL 73
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
L+ T +Y + ++ S +AL F M +G + + + +L+C
Sbjct: 74 MLQLTQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCL 133
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCL---------------KLVLMYIEEGL---- 344
A +F E + K +L + +L+ M E GL
Sbjct: 134 LIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNV 193
Query: 345 VEKTLDVVESMKNAKLKISDCISC---------------AIVNGFSKRRGYWAAVKVYEQ 389
V T + K+ + ++ + C ++NGF K+ ++YE
Sbjct: 194 VIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYEN 253
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ G +P Y +I+ YC + KA KVF EM++KG V+ Y+ ++ + +
Sbjct: 254 MKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKK 313
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+A+ LV K+ G PN+ YN L++ + + +L+ +++ ++P V+Y T
Sbjct: 314 FGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNT 373
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+I+ Y++ + E + I++ F++L+ E+ ++ M+ G
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSG 433
Query: 570 TKLDERLYHSAMNAL 584
D Y ++ L
Sbjct: 434 LVPDVYTYSVLLHGL 448
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/442 (19%), Positives = 185/442 (41%), Gaps = 13/442 (2%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
H+ VP + F++ L +++ + A+ +NE K + + + ++I+ ++
Sbjct: 117 HEGHVPLSNTFNNLLCLLIRSNYFDK-AWWIFNELKS--KVVLDAYSFGIMIKGCCEAGY 173
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALL----A 188
+ L + + + P+ + L+ C + +A L F + L+
Sbjct: 174 FVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNL---FCKMNRLGLVPNPHT 230
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
++ M G+ K + +YE MK +GIV ++ Y ++ Y G +K +F E +
Sbjct: 231 YSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMR 290
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ + + Y IL L + + EA+K + + G+ + Y LI F +
Sbjct: 291 EKGIACGVMT---YNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVR 347
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
++ A LF + + G+ L+ Y + + LD+V+ M+ + S
Sbjct: 348 KMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYT 407
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+++ F++ A +++ + G +P TY+ +++ C +A K+F + +
Sbjct: 408 ILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEM 467
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
V Y++M+ Y K G A+ L+ +M G PNV + S + + R + ++
Sbjct: 468 HLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEA 527
Query: 489 EKLWKEMERRKVTPDKVSYTTV 510
E L +M + P Y V
Sbjct: 528 ELLLGQMINSGLKPSVSLYKMV 549
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/463 (20%), Positives = 201/463 (43%), Gaps = 13/463 (2%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+PD F++ +HG++ + + + + ++ K L P+ TL L+ +V++ +
Sbjct: 646 MPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKML---TPDCVTLCTLLPGVVKNGLMEDA 702
Query: 137 VSLSEDF-KIYNVLPDAHTCSRLVASCVRA----RKFKIANTLLQVFITDGEIALLAFNS 191
++EDF V D L+ + + + L+ + L+
Sbjct: 703 FKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIK 762
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ + + + S + + K L+S Y ++E + + + E LF E K+
Sbjct: 763 VLCKHKQALVAQSVFIRFTKELGVKPTLES--YNFLIEGFLGVHNDEMAWNLFTEMKNAG 820
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
F+ Y +L D+ GKSG+ E + + M + + +I + +
Sbjct: 821 CAPDVFT---YNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLD 877
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A +LF + P L+ ++ G +E+ ++ E M + + ++ I ++
Sbjct: 878 KALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILI 937
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
NGF K A +++++++ +G P +Y S++ C A F +++Q G
Sbjct: 938 NGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLY 997
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+AY+ M+ G++ RI +A+ L +M+++G P+++ YNSL+ G A + Q KL
Sbjct: 998 LDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKL 1057
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
++E++ + P+ +Y +I Y+ + D Y + G
Sbjct: 1058 YEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGG 1100
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 119/543 (21%), Positives = 218/543 (40%), Gaps = 15/543 (2%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
IEL D PD +S ++ + K + E A+ + K + + P T LI
Sbjct: 529 IELLSDMSENQCEPDIIVINSLINTLYKAGRVDE-AWKMFCRLKDM-KLAPTVVTYNTLI 586
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
L + + + L P+ T + ++ + + +A +L T +
Sbjct: 587 AGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCM 646
Query: 185 A-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG---DSEKV 240
+L FN+ + G I ++ +MK + D C ++ K G D+ K+
Sbjct: 647 PDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKI 705
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG-ILEDPSIYAS 299
A F+ +D + M IL + E F D G + +D S+
Sbjct: 706 AEDFVHRLGVYVDRRFWEDLMGGILTQA------GTEKTILFGDRLVCGRVCKDGSVLMP 759
Query: 300 LICSFASITEVKLAEELF-KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
+I + +A+ +F + +E G+ E L+ ++ E ++ MKNA
Sbjct: 760 IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNA 819
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+++ K ++YEQ+I C P +T+ II + KA
Sbjct: 820 GCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKA 879
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+F ++ F Y ++ K+GR+ +A L +M GC PN IYN L++
Sbjct: 880 LDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILING 939
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
G+ ++ +L+K M R + PD SYT+++ A D + ++ + + G +D
Sbjct: 940 FGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLD 999
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+M+ + +IEE + L +M+S G D Y+S + L AG+ QA L +
Sbjct: 1000 SIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYE 1059
Query: 599 NFE 601
+
Sbjct: 1060 ELQ 1062
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/475 (20%), Positives = 194/475 (40%), Gaps = 49/475 (10%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVS 138
+A ++ +H +L+ +E A + Y L +P T L+ + + +++ S
Sbjct: 193 NAYSYNGLIHLLLQSGLCRE-ALEMYRRMV-LEGLKPSLKTFSALMVATGKRRDTETVKS 250
Query: 139 LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG----EIALLAFNSAMG 194
L E+ + + P+ +T + + RA + A +++ DG + A+
Sbjct: 251 LLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALC 310
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS 254
KL + ++ KMK++ D Y +++ + GD +V + E ++ D
Sbjct: 311 TAGKLD---DAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEA---DG 364
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
+ IL ++L K+G EA M+++G+L + Y +LI + + A
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDAL 424
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC-AIVNG 373
+LF E G++ + + Y + G +K L+ E MK + + ++C A +
Sbjct: 425 DLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIA-PNIVACNASLYS 483
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYA------------------------------ 403
++ A ++ +L S G P VTY
Sbjct: 484 LAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPD 543
Query: 404 -----SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
S+IN + +A K+F ++ VV Y++++A GK G+++ AM L A
Sbjct: 544 IIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFA 603
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
M GC PN +N+++D + + K+ +M PD +++ T+I
Sbjct: 604 SMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHG 658
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 108/235 (45%)
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
L+ + ++ GL + L++ M LK S A++ KRR + E++ S G
Sbjct: 200 LIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLG 259
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
P TY I R +A ++ M+ G VV Y+ ++ G++ DAM
Sbjct: 260 LKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAM 319
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L KMKA +P+ Y +++D +L +V++ W EME PD +++T +++A
Sbjct: 320 ELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNAL 379
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+A D + R G + + ++ +++++++ + L +M++ G
Sbjct: 380 CKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLG 434
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 137/331 (41%), Gaps = 6/331 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P + ++ + G L E+A++ + E K P+ T LL+ +S K + +
Sbjct: 788 PTLESYNFLIEGFL-GVHNDEMAWNLFTEMKN-AGCAPDVFTYNLLLDAHGKSGKINELF 845
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-DGEIALLAFNSAMGGY 196
L E + P+ T + ++A+ V++ A L ++ D + + G
Sbjct: 846 ELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGL 905
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K ++E+M G ++ Y ++ + K GD LF K +
Sbjct: 906 LKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELF---KRMVREGIR 962
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y L L ++GR +AL +F +K+ G+ D Y +I ++ A L
Sbjct: 963 PDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTL 1022
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ E + +G+ D L+L G+VE+ + E ++ L+ + A++ G+S
Sbjct: 1023 YDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSM 1082
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
+A VY++++ GC P T+A + N
Sbjct: 1083 SGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 103/238 (43%)
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
V M+N +K I G R G + ++ G +Y +I+
Sbjct: 146 VFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLL 205
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ L +A +++ M +G + +S+++ GK L+ +M++ G +PN++
Sbjct: 206 QSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIY 265
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
Y + + GRA + + ++ K ME PD V+YT +I A A + D ++ + +
Sbjct: 266 TYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKM 325
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ + DR M+ FS + + + +M+++G D + +NAL AG
Sbjct: 326 KASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAG 383
>gi|7529747|emb|CAB86932.1| putative protein [Arabidopsis thaliana]
gi|24030379|gb|AAN41351.1| unknown protein [Arabidopsis thaliana]
Length = 526
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 167/363 (46%), Gaps = 44/363 (12%)
Query: 224 YCQIMEAYYKIGD---SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALK 280
+ ++ AY K+G+ +E+V ++ K+ STP + Y L +S G+ G+ A
Sbjct: 85 FLMLITAYGKLGNFNGAERVLSVL-----SKMGSTP-NVISYTALMESYGRGGKCNNAEA 138
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
FR M+ G Y ++ +F + K AEE+F
Sbjct: 139 IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF----------------------- 175
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
E LD K + LK + ++ + K Y A KV+ ++ +G V
Sbjct: 176 -----ETLLD----EKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 226
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TY S+++ Y + K++ +MQ+ VV+Y+ ++ YG+ R +A+ + +M
Sbjct: 227 TYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 283
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
G P YN L+D + + Q + ++K M R ++ PD SYTT++SAY A +
Sbjct: 284 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 343
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ KF+ +++G + G ++ ++K + +E+++++ + M+ G K ++ + +
Sbjct: 344 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTI 403
Query: 581 MNA 583
M+A
Sbjct: 404 MDA 406
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 8/209 (3%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF---IEMQQKGFDKCVVAYSS 439
A ++ ++ S G P +TY I+ + + +AE+VF ++ ++ Y
Sbjct: 136 AEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHM 195
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
M+ MY K G A + + M KG + YNSLM + ++V K++ +M+R
Sbjct: 196 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE---TSYKEVSKIYDQMQRSD 252
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GIMVGVFSKLSQIEEL 558
+ PD VSY +I AY RAR + + + E ++ GV A I++ F+ +E+
Sbjct: 253 IQPDVVSYALLIKAYGRARREEEALSVFEEM-LDAGVRPTHKAYNILLDAFAISGMVEQA 311
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDA 587
+ + M+ + D Y + ++A +A
Sbjct: 312 KTVFKSMRRDRIFPDLWSYTTMLSAYVNA 340
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 57/149 (38%), Gaps = 32/149 (21%)
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ YGK G A +++ + G PNV Y +LM+ +GR E +++ M+
Sbjct: 88 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 147
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
P ++Y ++ + +F + EE+
Sbjct: 148 PEPSAITYQIILKTFVEGDKF--------------------------------KEAEEVF 175
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ L D K K D+++YH + + AG
Sbjct: 176 ETLLDEKKSPLKPDQKMYHMMIYMYKKAG 204
>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
Length = 845
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 184/406 (45%), Gaps = 15/406 (3%)
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
++ + FN + GY K Y +M++ G+V DS + I +K G + ++
Sbjct: 320 QVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVH 379
Query: 243 LFLECKSRKLDSTPFSTHM----YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
D FS+HM +L L R +A + E+G+ + +
Sbjct: 380 ----------DHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFN 429
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
+LI +++ + A EL++ + G+ L++ +G +++ ++E M +
Sbjct: 430 ALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSK 489
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+S + + + + + A+K ++ + + G + +++ IN CR+ ++A
Sbjct: 490 GYCLSTSFTICL-DAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEA 548
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+ F EM +G + Y+S+++ K G + +A+ LV M+ G P+++ N L+D
Sbjct: 549 YQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDG 608
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
R L+ V+ L +M +TPD V+Y T+I+AY RA++ + + F N+ + G D
Sbjct: 609 LCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPD 668
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
I + + + + KLL ++ + + Y++ M+ +
Sbjct: 669 IFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGI 714
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/435 (20%), Positives = 171/435 (39%), Gaps = 44/435 (10%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+L FN+ + G+ M + M +GI D Y +++ + G S +F
Sbjct: 217 SLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFKMF 276
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ T + Y IL D L GR EA + F +M + GI + + LI +
Sbjct: 277 EGMHRSGCEPTVVT---YNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGY 333
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM-------YIEEGLVEKTLDVVESMKN 357
A ++ A ++E + +G++ P+ C ++ Y + LV M
Sbjct: 334 AKSGQMDQASAAYREMQARGLV--PDSCTFNIIAARAHKFGYAAQ-LVHDHDMFSSHMSA 390
Query: 358 AKLKISDCISC----------------------------AIVNGFSKRRGYWAAVKVYEQ 389
L + C C A++ +SK + A ++Y
Sbjct: 391 DGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRI 450
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV-VAYSSMVAMYGKTG 448
+ G P T+ +I C +A+ + M KG+ C+ +++ + Y + G
Sbjct: 451 MNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGY--CLSTSFTICLDAYFRDG 508
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
A+ M G + + +++ ++ R + + + + EM R + P+ ++Y
Sbjct: 509 NAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYN 568
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
++ISA +A +K R +G V D + I++ + +++ + LL DM S
Sbjct: 569 SIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSN 628
Query: 569 GTKLDERLYHSAMNA 583
G D Y++ +NA
Sbjct: 629 GLTPDTVTYNTIINA 643
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%)
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
AA V+E++ ++G P T+ +++ +C + A + M + G V +Y+ ++
Sbjct: 201 AAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILI 260
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ G RDA + M GCEP V YN L+D+ + + +L+ EM + +
Sbjct: 261 KGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQ 320
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ +++ +I Y ++ + D Y E + G V D I+ K +LV
Sbjct: 321 VNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLV 378
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 87/202 (43%)
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
+G A EAL ++ G S ++L+ EV+ A +F+E +G
Sbjct: 161 AGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAEGPRPSLAT 220
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI 391
++L + G+V ++ M + + C ++ G A K++E +
Sbjct: 221 FNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFKMFEGMH 280
Query: 392 SQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 451
GC P VTY +++ C +A ++F EM Q G + ++ ++ Y K+G++
Sbjct: 281 RSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKSGQMD 340
Query: 452 DAMWLVAKMKAKGCEPNVWIYN 473
A +M+A+G P+ +N
Sbjct: 341 QASAAYREMQARGLVPDSCTFN 362
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 114/277 (41%), Gaps = 12/277 (4%)
Query: 140 SEDFKIYNVL---PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGY 196
SE ++I N L P + T + L+ + A LL+ ++ G +F + Y
Sbjct: 445 SELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDAY 504
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ + ++ M + G+ D + + ++ + F E SR +
Sbjct: 505 FRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNN 564
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS--LICSFASITEVKLAE 314
+ Y + +L K+G EALK ++M++ G++ P IY S LI ++K+ +
Sbjct: 565 IT---YNSIISALCKAGNMTEALKLVQNMRQSGLV--PDIYTSNILIDGLCREGKLKMVD 619
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-VNG 373
L + G+ D ++ Y + ++ + M A + D + I ++
Sbjct: 620 NLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCE-PDIFTYNIWMHS 678
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+ A K+ ++L++ C P VTY ++++ C
Sbjct: 679 LCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGIC 715
>gi|255661182|gb|ACU25760.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 426
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 162/337 (48%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D +++++ + L + ++ MK A + + ++ + + +
Sbjct: 70 LKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS++ ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D +A++ L AG +A ++
Sbjct: 310 RLLHELK----RPDNIPRDTAIHILAGAGRIEEATYV 342
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 149/314 (47%), Gaps = 6/314 (1%)
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+++ + D Y++LI F A ++ E+ + D + L+ + +
Sbjct: 1 RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDY 60
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
K + + +KN+ A++ F K + + A + ++ + G IP +Y+++
Sbjct: 61 SKAISIFSRLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTL 120
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS---MVAMYGKTGRIRDAMWLVAKMKA 462
+ Y + +A VF EM++ KC++ ++ M+ +YG+ G ++A L M+
Sbjct: 121 LTMYVENKKFLEALSVFSEMREI---KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 177
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
G EPNV YN+L+ ++G A+ + L++ M+R+ + + V+Y ++I Y + E +
Sbjct: 178 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEK 237
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
E + G + ++ ++ K+ +++ L Q ++S G ++D+ L+ + +
Sbjct: 238 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIV 297
Query: 583 ALRDAGLQMQAQWL 596
A AGL A+ L
Sbjct: 298 AYERAGLVAHAKRL 311
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 164/374 (43%), Gaps = 7/374 (1%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
+KM+ + D Y ++E K+ D K ++F K+ TP Y +
Sbjct: 33 QKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKNSGY--TP-DLVAYNAMIIVF 89
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
GK+ EA +MK G++ + + Y++L+ + + A +F E E L D
Sbjct: 90 GKAKLFREARSLISEMKTAGVIPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDL 149
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 150 TTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRL 209
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
+ + VTY S+I Y + + KA + EMQ +G + + YS++++++GK G+
Sbjct: 210 MQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGK 269
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ A L K+++ G E + ++ +++ + RA + ++L E++R PD + T
Sbjct: 270 LDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRDT 325
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
I A + + + G V D + M+ + SK + +V++ M+ G
Sbjct: 326 AIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLG 385
Query: 570 TKLDERLYHSAMNA 583
D + +NA
Sbjct: 386 YFPDSNVIAIVLNA 399
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/425 (19%), Positives = 189/425 (44%), Gaps = 12/425 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P++ T LI + + +D+ +S + + V D S L+ + + A ++
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 175 LQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G L+A+N+ + + K ++ + +MK+AG++ ++ Y ++ Y +
Sbjct: 67 FSRLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTLLTMYVE 126
Query: 234 IGDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ ++F E + K LD T + I+ D G+ G A EA K F M++ GI
Sbjct: 127 NKKFLEALSVFSEMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y +L+ + A LF+ + K + ++ ++++Y + EK ++
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNL 241
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
++ M++ ++ + I++ + K A ++++L S G Q+ + ++I AY R
Sbjct: 242 IQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYER 301
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
L + A+++ E+++ + + + + GRI +A ++ + G ++ +
Sbjct: 302 AGLVAHAKRLLHELKRPD----NIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITV 357
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+ ++ + + K V +++ +M PD V++AY + EFD Y E +
Sbjct: 358 FERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAIVLNAYGKLHEFDKANDVYMEMQ 417
Query: 532 MNGGV 536
G V
Sbjct: 418 EVGCV 422
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 143/355 (40%), Gaps = 47/355 (13%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA- 171
+ P+ +I ++K + SL + K V+P+ + S L+ V +KF A
Sbjct: 75 YTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTLLTMYVENKKFLEAL 134
Query: 172 ------------------NTLLQVFITDG-----------------EIALLAFNSAMGGY 196
N ++ V+ G E ++++N+ + Y
Sbjct: 135 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
++ I ++ M+ I + Y ++ Y K + EK L E +SR ++
Sbjct: 195 GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNS 254
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ Y + GK G+ A F+ ++ G+ D ++ ++I ++ V A+ L
Sbjct: 255 IT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 311
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E L+ P+ + ++I G +E+ V +A + +++
Sbjct: 312 LHE------LKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 365
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
SK + Y V+V++++ G P A ++NAY ++ + KA V++EMQ+ G
Sbjct: 366 SKYKKYANVVEVFDKMRGLGYFPDSNVIAIVLNAYGKLHEFDKANDVYMEMQEVG 420
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q + G E + +++ + + K+ ++++K++S+G+ +D + ++
Sbjct: 238 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P T ++ L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIPRDTAIH-----ILAGAGRIEEATYVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I + + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAIVLNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|255661164|gb|ACU25751.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 426
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 159/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ + ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 150/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G+ + L+ MY+E + L M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSXFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 161/353 (45%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG+ ++ Y ++ Y + + + F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSXFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ +A + + GRI +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + EFD Y E + G V
Sbjct: 370 KYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 141/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDIAIHILAGAGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A ++NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANDVYMEMQEVG 420
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|255661130|gb|ACU25734.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 426
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 160/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K + NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIDQNVVTYNSMMMIYGKTLEHVKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 150/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G+ + L+ MY+E + L V M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K D
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNID 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+SM+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHVKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM------------------- 532
++++ V D+V Y T+I AY RA + +E +
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 533 ------------NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALI 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 160/355 (45%), Gaps = 15/355 (4%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG+ ++ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE--KTLDVVESMKNAKLK 361
+ A LF+ + K + D V +M I +E K ++++ M+N ++
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNI--DQNVVTYNSMMMIYGKTLEHVKANNLIQEMQNRGIE 251
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
E+++ +A + + GRI +A W+ + G ++ ++ ++ + +
Sbjct: 312 LHELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSK 367
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
K V +++ +M PD +++AY + EFD Y E + G V
Sbjct: 368 YKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 98/193 (50%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL 589
Y++ + DA L
Sbjct: 187 YNTLLRVYGDAEL 199
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 141/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIDQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ K L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 232 TLEHVKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDIAIHILAGAGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A I+NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANDVYMEMQEVG 420
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|8778411|gb|AAF79419.1|AC025808_1 F18O14.1 [Arabidopsis thaliana]
Length = 689
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 145/303 (47%), Gaps = 1/303 (0%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILE-DPSIYASLICSFASITEVKLAEELFKEAEE 322
I+ ++ +SG +A+ F ++ + LE + Y SLI +A I +V+ + + E
Sbjct: 15 IVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSE 74
Query: 323 KGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWA 382
+G+ R+ L+ Y ++GL+E+ V E +K KL + +++G+ +
Sbjct: 75 RGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRD 134
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
AV+V++ +I G S+IN YC+ +AE++F M Y+++V
Sbjct: 135 AVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVD 194
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
Y + G + +A+ L +M K P V YN L+ + R V LWK M +R V
Sbjct: 195 GYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNA 254
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D++S +T++ A + +F+ +K + G + D +M+ K+ ++ E ++L
Sbjct: 255 DEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL 314
Query: 563 QDM 565
++
Sbjct: 315 DNV 317
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/445 (20%), Positives = 197/445 (44%), Gaps = 13/445 (2%)
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL------LAFNSAMGGYNKL 199
+ V PD TCS +V + R+ A VF + E +L + +NS + GY +
Sbjct: 4 FEVSPDVFTCSIVVNAYCRSGNVDKA----MVFAKETESSLGLELNVVTYNSLINGYAMI 59
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFST 259
V M G+ + Y +++ Y K G E+ +F K +KL +
Sbjct: 60 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVA---DQ 116
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
HMY +L D ++G+ +A++ +M E G+ + +I SLI + ++ AE++F
Sbjct: 117 HMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSR 176
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ + D LV Y G V++ L + + M ++ + ++ G+S+
Sbjct: 177 MNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGA 236
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ + +++ ++ +G +++ ++++ A ++ +++A K++ + +G + +
Sbjct: 237 FHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNV 296
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
M++ K ++ +A ++ + C+P V Y +L + + NL++ + + MER+
Sbjct: 297 MISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 356
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P Y T+IS + R + E R G A G ++ + + I++
Sbjct: 357 IFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAY 416
Query: 560 KLLQDMKSEGTKLDERLYHSAMNAL 584
+M +G L+ + N+L
Sbjct: 417 ATCFEMIEKGITLNVNICSKIANSL 441
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 3/274 (1%)
Query: 329 PEV--CLKLVLMYIEEGLVEKTLDVV-ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
P+V C +V Y G V+K + E+ + L+++ +++NG++ +
Sbjct: 8 PDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTR 67
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
V + +G VTY S+I YC+ L +AE VF +++K Y ++ Y
Sbjct: 68 VLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYC 127
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
+TG+IRDA+ + M G N I NSL++ + ++ L + E+++ M + PD
Sbjct: 128 RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHH 187
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y T++ Y RA D +K ++ V I++ +S++ +++ L + M
Sbjct: 188 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 247
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
G DE + + AL G +A L +N
Sbjct: 248 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWEN 281
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 166/381 (43%), Gaps = 14/381 (3%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITD 181
L+ L + ++ + L E+ +L D T + +++ + K A +L V I
Sbjct: 262 LLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 321
Query: 182 GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ A+ + + GY K+ V E M+ GI Y ++ +K KVA
Sbjct: 322 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVA 381
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
L +E ++R L TP + Y L G +A +M EKGI + +I + +
Sbjct: 382 DLVIELRARGL--TP-TVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIA 438
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE--KTLDVVESMKNA- 358
S + ++ A L ++ + +L LK ++E KT + ES++N+
Sbjct: 439 NSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLK---EFLEASATTCLKTQKIAESVENST 495
Query: 359 --KLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQG-CIPGQVTYASIINAYCRIAL 414
KL + + I + + G K A K++ L+S IP + TY +I+
Sbjct: 496 PKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGD 555
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+KA + EM KG +V Y++++ K G + A L+ K+ KG PN YN+
Sbjct: 556 INKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNT 615
Query: 475 LMDMHGRAKNLRQVEKLWKEM 495
L+D ++ N+ + +L ++M
Sbjct: 616 LIDGLVKSGNVAEAMRLKEKM 636
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/512 (17%), Positives = 182/512 (35%), Gaps = 124/512 (24%)
Query: 150 PDAHTCSRLVASCVRA----RKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYST 205
PD HT + LV RA K+ + + Q + ++ +N + GY+++ ++
Sbjct: 184 PDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVP---TVMTYNILLKGYSRIGAFHDV 240
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ +++ M G+ D ++EA +K+GD
Sbjct: 241 LSLWKMMLKRGVNADEISCSTLLEALFKLGDFN--------------------------- 273
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
EA+K + ++ +G+L D +I + +V A+E+ +
Sbjct: 274 -----------EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVN---I 319
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
R C V Y +++ + K+ + V + +R+G + ++
Sbjct: 320 FR----CKPAVQTY-------------QALSHGYYKVGNLKEAFAVKEYMERKGIFPTIE 362
Query: 386 VYEQLIS--------------------QGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
+Y LIS +G P TY ++I +C I + KA EM
Sbjct: 363 MYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 422
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM-------------------KAKGC- 465
+KG V S + + +I +A L+ K+ A C
Sbjct: 423 IEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCL 482
Query: 466 ------------------EPNVWIYNSLMDMHGRAKNLRQVEKLWKEM-ERRKVTPDKVS 506
PN +YN + +A L KL+ ++ + PD+ +
Sbjct: 483 KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT 542
Query: 507 YTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
YT +I A + + +E + G + + ++ KL ++ +LL +
Sbjct: 543 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLP 602
Query: 567 SEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+G + Y++ ++ L +G +A L++
Sbjct: 603 QKGITPNAITYNTLIDGLVKSGNVAEAMRLKE 634
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 92/468 (19%), Positives = 186/468 (39%), Gaps = 64/468 (13%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ + G + Y +EA KL + +K + ++ Y + K + I
Sbjct: 184 PDHHTYNTLVDGYCR--------AGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIG 235
Query: 138 SLSEDFKIYNVL------PDAHTCSRLVASCVRARKFKIA-----NTLLQVFITDGEIAL 186
+ + ++ ++ D +CS L+ + + F A N L + +TD
Sbjct: 236 AFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTD----T 291
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDS----------GCYCQIMEAYYKIGD 236
+ N + G K+ EK+ A +LD+ Y + YYK+G+
Sbjct: 292 ITLNVMISGLCKM----------EKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGN 341
Query: 237 SEKVAAL--FLECKSRKLDSTPFST-HMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
++ A+ ++E K F T MY L K + +++ +G+
Sbjct: 342 LKEAFAVKEYMERKG------IFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPT 395
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV-----LMYIEEG--LVE 346
+ Y +LI + +I + A E EKG+ + +C K+ L I+E L++
Sbjct: 396 VATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQ 455
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
K +D + + + + + + ++ A V + +P + Y I
Sbjct: 456 KIVDF-DLLLPGYQSLKEFLEASATTCLKTQK---IAESVENSTPKKLLVPNNIVYNVAI 511
Query: 407 NAYCRIALYSKAEKVFIEM-QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
C+ A K+F ++ F Y+ ++ G I A L +M KG
Sbjct: 512 AGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGI 571
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
PN+ YN+L+ + N+ + ++L ++ ++ +TP+ ++Y T+I
Sbjct: 572 IPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 619
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 1/200 (0%)
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK-GFDKCVVAYSSMVAMYGKTG 448
+IS P T + ++NAYCR KA E + G + VV Y+S++ Y G
Sbjct: 1 MISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG 60
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ ++ M +G NV Y SL+ + + + + E +++ ++ +K+ D+ Y
Sbjct: 61 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 120
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
++ Y R + V+ ++ G + I ++ + K Q+ E ++ M
Sbjct: 121 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 180
Query: 569 GTKLDERLYHSAMNALRDAG 588
K D Y++ ++ AG
Sbjct: 181 SLKPDHHTYNTLVDGYCRAG 200
>gi|410110071|gb|AFV61115.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
macrostachya]
Length = 437
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 153/322 (47%), Gaps = 3/322 (0%)
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 2 EMRQRALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 58
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ + A +F + G D ++ ++ + L + ++ M+ A + +
Sbjct: 59 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA 118
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++ + + + + A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M
Sbjct: 119 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
++ G + VV+Y++++ +YG +A+ L M+ K NV YNS+M ++G+
Sbjct: 179 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEH 238
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ + M
Sbjct: 239 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 298
Query: 546 VGVFSKLSQIEELVKLLQDMKS 567
+ + + + +LL ++KS
Sbjct: 299 IVAYERAGLVAHAKRLLHELKS 320
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 150/316 (47%), Gaps = 6/316 (1%)
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+M+++ + D Y++LI F A ++ E+ + D + L+ + +
Sbjct: 2 EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 61
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
K + + +K + A++N F K + + A + ++ + G +P +Y+
Sbjct: 62 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYS 121
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS---MVAMYGKTGRIRDAMWLVAKM 460
+++ Y + +A VF EM++ KC++ ++ M+ +YG+ G ++A L M
Sbjct: 122 TLLTMYVENKKFLEALSVFSEMREI---KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ G EPNV YN+L+ ++G A+ + L+ M+R+ + + V+Y +++ Y + E
Sbjct: 179 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEH 238
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ E + G + ++ ++ K+ +++ L Q ++S G ++D+ LY +
Sbjct: 239 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 298
Query: 581 MNALRDAGLQMQAQWL 596
+ A AGL A+ L
Sbjct: 299 IVAYERAGLVAHAKRL 314
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 169/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F+ + Y + +
Sbjct: 36 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKRSGFTPDLVAYNAMIN 90
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +M+ G++ + + Y++L+ + + A +F E E L
Sbjct: 91 VFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLL 150
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 151 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 210
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 211 XLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV 270
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + +Y +++ + RA + ++L E++ +PD +
Sbjct: 271 GKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----SPDNIPR 326
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ +FSK + +V++ M+
Sbjct: 327 DTAIHILAGAGRIEEATYVFRQAIDAGEVKDIMVFERMIHLFSKYKKYANVVEVFDKMRG 386
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 387 LGYFPDSNVIALVLNA 402
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 163/353 (46%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG++ ++ Y ++ Y + + ++F
Sbjct: 82 LVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFS 141
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 142 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 196
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF + K ++++ ++++Y + EK ++++ M+N ++ +
Sbjct: 197 YGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 256
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 257 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLH 316
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+ K D + + + + GRI +A ++ + G ++ ++ ++ + + K
Sbjct: 317 EL--KSPDN--IPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDIMVFERMIHLFSKYK 372
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + EFD Y E + G V
Sbjct: 373 KYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVGCV 425
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 142/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 115 PNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 174
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ IV + Y +M Y K
Sbjct: 175 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGK 234
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 235 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 291
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + ++I G +E+ V
Sbjct: 292 QVLYQTMIVAYERAGLVAHAKRLLHE------LKSPDNIPRDTAIHILAGAGRIEEATYV 345
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A ++NAY +
Sbjct: 346 FRQAIDAGEVKDIMVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGK 405
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 406 LHEFDKANGVYMEMQEVG 423
>gi|302762392|ref|XP_002964618.1| hypothetical protein SELMODRAFT_61490 [Selaginella moellendorffii]
gi|300168347|gb|EFJ34951.1| hypothetical protein SELMODRAFT_61490 [Selaginella moellendorffii]
Length = 523
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 159/352 (45%), Gaps = 14/352 (3%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S + L +SL K+G+ A+K F M G ED Y ++ + S + A +
Sbjct: 140 SAKTFVKLAESLCKAGKEDIAVKLFDRMGANGAPEDIHTYHCVVDAITSFGRIDHATAVL 199
Query: 318 KEAEEKGM-LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+ E+ + D +++ + G ++K L + MK+++ ++NGF K
Sbjct: 200 EAMEQSDCCMPDTVTYTRMIDGFCRRGELDKALVIYSRMKDSESSPDVVTFGCLINGFCK 259
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A+ + + + G P ++TY+SII+ C + L+ A VF +Q+ +
Sbjct: 260 ALKFDEAIIILKASLDAGLEPDEITYSSIIDPLCNLELWDIALVVFELARQRNCPGSIYL 319
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKM--------KAKG---CEPNVWIYNSLMDMHGRAKNL 485
YS ++ K G+I +A+ L+ M +A G C+P + IYN+++D + +
Sbjct: 320 YSRLMNCLCKAGKIEEAVLLLEDMSHGRKHSGQALGGEVCKPTLVIYNNVIDAFCQENRI 379
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-GI 544
+ ++ K ME + + D V+YT+ + A D K +G IA
Sbjct: 380 EEALQMAKAMEEQGIGADVVTYTSFLRALCNVGMVDEACKLLEMMATSGSSFPDVIACNA 439
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+VG F +++EE LL+ M G + D+ Y + AL A +M+A L
Sbjct: 440 LVGAFCSAARVEEACNLLRAMLEHGIEPDDLTYTQVIGALC-ASKRMEAAML 490
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 189/452 (41%), Gaps = 61/452 (13%)
Query: 80 AKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSL 139
A+ ++S + + + QE+ ++ E + F PE ST LL+R +
Sbjct: 70 ARIYNSVFKALDRMHRFQEV-FEMVEELIEQENFVPEDSTADLLVRIYCKG--------- 119
Query: 140 SEDFKIYNVLPDAHTCSRLVASCVR--ARKF-KIANTLLQVFITDGEIALLAFNSAMGGY 196
+ V A RLV + VR A+ F K+A +L + D + L A G
Sbjct: 120 ------FAVDKGAWFLGRLVNAGVRVSAKTFVKLAESLCKAGKEDIAVKLFDRMGANGAP 173
Query: 197 NKLHMYYSTI-------------LVYEKMKSAGIVL-DSGCYCQIMEAYYKIGDSEKVAA 242
+H Y+ + V E M+ + + D+ Y ++++ + + G+ +K A
Sbjct: 174 EDIHTYHCVVDAITSFGRIDHATAVLEAMEQSDCCMPDTVTYTRMIDGFCRRGELDK--A 231
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L + + + +S+P + L + K+ + EA+ + + G+ D Y+S+I
Sbjct: 232 LVIYSRMKDSESSP-DVVTFGCLINGFCKALKFDEAIIILKASLDAGLEPDEITYSSIID 290
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
++ +A +F+ A ++ + +L+ + G +E+ + ++E M + +
Sbjct: 291 PLCNLELWDIALVVFELARQRNCPGSIYLYSRLMNCLCKAGKIEEAVLLLEDMSHGR--- 347
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF 422
K G + L + C P V Y ++I+A+C+ +A ++
Sbjct: 348 -------------KHSG--------QALGGEVCKPTLVIYNNVIDAFCQENRIEEALQMA 386
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE-PNVWIYNSLMDMHGR 481
M+++G VV Y+S + G + +A L+ M G P+V N+L+
Sbjct: 387 KAMEEQGIGADVVTYTSFLRALCNVGMVDEACKLLEMMATSGSSFPDVIACNALVGAFCS 446
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
A + + L + M + PD ++YT VI A
Sbjct: 447 AARVEEACNLLRAMLEHGIEPDDLTYTQVIGA 478
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 128/318 (40%), Gaps = 16/318 (5%)
Query: 149 LPDAHTCSRLVAS-CVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTIL 207
+PD T +R++ C R K ++ ++ ++ F + G+ K + I+
Sbjct: 209 MPDTVTYTRMIDGFCRRGELDKALVIYSRMKDSESSPDVVTFGCLINGFCKALKFDEAII 268
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ + AG+ D Y I++ + + +F + R + P S ++Y L +
Sbjct: 269 ILKASLDAGLEPDEITYSSIIDPLCNLELWDIALVVFELARQR---NCPGSIYLYSRLMN 325
Query: 268 SLGKSGRAFEALKFFRDMKEK---------GILEDPS--IYASLICSFASITEVKLAEEL 316
L K+G+ EA+ DM G + P+ IY ++I +F ++ A ++
Sbjct: 326 CLCKAGKIEEAVLLLEDMSHGRKHSGQALGGEVCKPTLVIYNNVIDAFCQENRIEEALQM 385
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC-AIVNGFS 375
K EE+G+ D + G+V++ ++E M + D I+C A+V F
Sbjct: 386 AKAMEEQGIGADVVTYTSFLRALCNVGMVDEACKLLEMMATSGSSFPDVIACNALVGAFC 445
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
A + ++ G P +TY +I A C A +F M+ +
Sbjct: 446 SAARVEEACNLLRAMLEHGIEPDDLTYTQVIGALCASKRMEAAMLLFEYMKVANHTPKLT 505
Query: 436 AYSSMVAMYGKTGRIRDA 453
Y ++ G ++DA
Sbjct: 506 TYKELMLGLYVNGSLQDA 523
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/526 (20%), Positives = 213/526 (40%), Gaps = 46/526 (8%)
Query: 114 RPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
RP + + L L ++K++D +++L + ++ + D +T + ++ R RK A
Sbjct: 85 RPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFA 144
Query: 172 -------------------NTLLQVFITDGEI-----------------ALLAFNSAMGG 195
NTLL +G + L+ N+ + G
Sbjct: 145 FSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNG 204
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ + +M + G + Y I+ K G++ L RK++
Sbjct: 205 LCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLL-----RKMEHR 259
Query: 256 PFSTHM--YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
H+ Y I+ D+L K GR +AL FF +M+ KGI + Y SLI SF S
Sbjct: 260 KIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDG 319
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+L ++ + + + L+ ++EG + + D+ M ++ + +++ G
Sbjct: 320 AQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYG 379
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+ A ++ + ++S+GC P TY +IN +C+ ++F +M +G
Sbjct: 380 LCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIAD 439
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V YS+++ + ++ ++ A + +M ++G P + Y L+D L + +
Sbjct: 440 TVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILD 499
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
+M + K+ D Y +I A + D + G D IM+ K S
Sbjct: 500 QMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRS 559
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNA-LRDAGLQMQAQWLQQ 598
+ E L + MK +G + D Y++ + A LR + Q +++
Sbjct: 560 SLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEE 605
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 163/345 (47%), Gaps = 9/345 (2%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+ +M++ GI + Y ++ ++ G + A L + +RK+ TP + + L DS
Sbjct: 288 FSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKI--TP-NVVTFSALIDS 344
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L K G+ EA + +M +GI + Y SLI + + A ++ KG D
Sbjct: 345 LVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGC--D 402
Query: 329 PEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVK 385
P++ +L+ + + V+ + + M + + I+D ++ ++ GF + R A K
Sbjct: 403 PDIWTYNILINGFCKAKQVDDGMRLFRKM-SLRGMIADTVTYSTLIQGFCQSRKLIVAKK 461
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
V+++++SQG PG +TYA +++ C +A + +M + + + Y+ ++
Sbjct: 462 VFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMC 521
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
++ DA L + +KG + ++ YN ++ + +L + + L+++M+ PD
Sbjct: 522 NANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGC 581
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
+Y T+I A+ R + V+ E + G D + I++ + S
Sbjct: 582 TYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLS 626
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/478 (20%), Positives = 196/478 (41%), Gaps = 41/478 (8%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +LIR + + L + + +LP + + ++ + + +K A +L
Sbjct: 315 PTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL 374
Query: 175 LQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
+ G +N + + + ++EKM G+ Y ++ Y
Sbjct: 375 FKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVN 434
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFE-ALKFFRDMKEKGILED 293
G ++ L+ E + TP ++ + K+ AF+ A +MK+ G+ +
Sbjct: 435 GCMDEAVKLYTEMPGKGF--TPNVVTYTTLMKGHINKA--AFDKAYALLAEMKQNGVSCN 490
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y +LI + V E+ K E +G ++ + +
Sbjct: 491 DYTYNTLINGLCVVGRVCEVGEMLKRFETEG--------------FVPTAMTYNS----- 531
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
I+NGF K +A VY+Q+ ++G P VTY S I+ YC+ +
Sbjct: 532 ----------------IINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTS 575
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
A K+ +++ KG + AY+S++ + + G + A+ ++ M G PN+ +YN
Sbjct: 576 CCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYN 635
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
S + + K + + +L+++M + + D +YTT+I +++ +K Y+E
Sbjct: 636 SFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAK 695
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA-LRDAGLQ 590
G + D + + I++ KLL +M + + +Y+ +N LR+ LQ
Sbjct: 696 GNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQ 753
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 190/449 (42%), Gaps = 9/449 (2%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR-PEKSTLKLLI 124
EL R +P +F+ + G+L D +L D + K++ + P+ T +LI
Sbjct: 338 ELCRQMRDHGLLPSTNEFNMVIKGLLND----KLWKDAVSLFKEMADSGIPDAFTYNILI 393
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHT-CSRLVASCVRARKFKIANTLLQVFITDGE 183
+L Q +K ++L E V P T S L+ CV + ++
Sbjct: 394 HWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFT 453
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
++ + + M G+ + + +MK G+ + Y ++ +G +V +
Sbjct: 454 PNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEM 513
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
++ T + Y + + K+G A ++ M KGI + Y S I
Sbjct: 514 LKRFETEGFVPTAMT---YNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDG 570
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ + LA ++ + KG+ D L+ + +EG + L V+ M L +
Sbjct: 571 YCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPN 630
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+ + + G+ + A+++YE++I +G TY ++I+ + + + A K++
Sbjct: 631 ISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYS 690
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM KG + ++++ + G I DA L+ +M PNV +YN L++ + R
Sbjct: 691 EMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNG 750
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
L++ +L EM RK+ PD +Y ++
Sbjct: 751 KLQEAFRLHDEMLERKIMPDDTTYDILVG 779
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/437 (20%), Positives = 185/437 (42%), Gaps = 5/437 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + ++I+ L+ K W VSL ++ + PDA T + L+ + RK + A L
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ G + ++ ++S + Y + +Y +M G + Y +M+ +
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+K AL E K + ++ Y L + L GR E + + + +G +
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDYT---YNTLINGLCVVGRVCEVGEMLKRFETEGFVPT 525
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y S+I F + A ++++ KG+ + + Y + + L ++
Sbjct: 526 AMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLN 585
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
++ L+ +++ GF + A++V ++ G +P Y S I Y +
Sbjct: 586 DVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLK 645
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ +A +++ +M ++G D Y++++ + K G + A+ L ++M AKG P+ +
Sbjct: 646 MMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFT 705
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+L R ++ KL EM R + P+ + Y +I+ Y R + + ++E
Sbjct: 706 ALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLER 765
Query: 534 GGVIDRAIAGIMVGVFS 550
+ D I+VG+ S
Sbjct: 766 KIMPDDTTYDILVGMKS 782
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 100/484 (20%), Positives = 206/484 (42%), Gaps = 21/484 (4%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+++R + +D V L ++ + PD CS +AS + R A +L+
Sbjct: 182 VVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDA 241
Query: 182 GEIAL-LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
G + FNS + K + + +++ + G + +M Y + K
Sbjct: 242 GFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKA 301
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASL 300
+F E L T + Y +L + G +A + R M++ G+L + + +
Sbjct: 302 LDIFEETLRDGLVPTDVT---YTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMV 358
Query: 301 ICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVESMKNA 358
I + K A LFKE + G+ P+ +L++ + + + L++ E M
Sbjct: 359 IKGLLNDKLWKDAVSLFKEMADSGI---PDAFTYNILIHWLCQRRKIREALNLWEKMNET 415
Query: 359 KLK-----ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
+K + C VNG AVK+Y ++ +G P VTY +++ + A
Sbjct: 416 GVKPYIVTYHSLLLCYCVNGCMDE-----AVKLYTEMPGKGFTPNVVTYTTLMKGHINKA 470
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ KA + EM+Q G Y++++ GR+ + ++ + + +G P YN
Sbjct: 471 AFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYN 530
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
S+++ +A + ++++M + + P+ V+YT+ I Y + D+ +K N+ R
Sbjct: 531 SIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCK 590
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G D A ++ F + + +++L M +G + +Y+S + ++ L+M
Sbjct: 591 GLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKN--LKMME 648
Query: 594 QWLQ 597
+ L+
Sbjct: 649 EALR 652
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 157/373 (42%), Gaps = 36/373 (9%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P M+ ++ + K G +A++ F +M I D + + I S + + A
Sbjct: 174 PLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALL 233
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ ++ ++ G + +V + ++ G +E+ L + + + K+S ++ +++G+
Sbjct: 234 VLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYC 293
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIIN----------AY--CR------------ 411
+R A+ ++E+ + G +P VTY +I AY CR
Sbjct: 294 LQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353
Query: 412 -----------IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
L+ A +F EM G Y+ ++ + +IR+A+ L KM
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGIPD-AFTYNILIHWLCQRRKIREALNLWEKM 412
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
G +P + Y+SL+ + + + KL+ EM + TP+ V+YTT++ + F
Sbjct: 413 NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
D E + NG + ++ + ++ E+ ++L+ ++EG Y+S
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSI 532
Query: 581 MNALRDAGLQMQA 593
+N AG+ A
Sbjct: 533 INGFIKAGMMGSA 545
>gi|410110145|gb|AFV61152.1| pentatricopeptide repeat-containing protein 123, partial [Nashia
inaguensis]
Length = 433
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 165/351 (47%), Gaps = 7/351 (1%)
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E + R L ++ Y L GK G A + + M++ + D +Y++LI
Sbjct: 2 EMRQRALSPDRYT---YSTLITHFGKEGLFDAAXSWLQKMEQDQVPGDLILYSNLIELSX 58
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ + A +F + G D ++ ++ + L + ++ MK A + +
Sbjct: 59 KLCDYSKAISIFSRLKRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 118
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++ + + + + A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M
Sbjct: 119 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
++ G + VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G+
Sbjct: 179 RKMGIEPSVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 238
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ + M
Sbjct: 239 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 298
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + + + +LL ++K + D +A++ L AG +A ++
Sbjct: 299 IVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYV 345
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 165/376 (43%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F + Y + +
Sbjct: 36 QKMEQDQVPGDLILYSNLIELSXKLCDYSKAISIF-----SRLKRSGFXPDLVAYNAMIN 90
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +MK G++ + + Y++L+ + + A +F E E L
Sbjct: 91 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLL 150
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ S ++ + + A+ ++
Sbjct: 151 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPSVVSYNTLLRVYGDAELFGEAIHLF 210
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 211 RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV 270
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + ++ +++ + RA + ++L E++R PD +
Sbjct: 271 GKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKR----PDNIPR 326
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ + SK + +V++ +
Sbjct: 327 DTAIHILAGAGRIEEATYVFRQAIDAGXVKDITVFERMIHLLSKYKKYSNVVEVFDKXRG 386
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 387 LGYFPDSDVIAIVLNA 402
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q ++ YS+++ + K A+ +
Sbjct: 10 PDRYTYSTLITHFGKEGLFDAAXSWLQKMEQDQVPGDLILYSNLIELSXKLCDYSKAISI 69
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM+ V P+ SY+T+++ Y
Sbjct: 70 FSRLKRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVE 129
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + ++E R ++D IM+ V+ +L +E KL M+ G +
Sbjct: 130 NKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPSVVS 189
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 190 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 221
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 166/355 (46%), Gaps = 15/355 (4%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +MK+AG++ ++ Y ++ Y + + ++F
Sbjct: 82 LVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFS 141
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI--YASLI 301
E + K LD T + I+ D G+ G A EA K F M++ GI +PS+ Y +L+
Sbjct: 142 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGI--EPSVVSYNTLL 194
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ A LF+ + K + ++ ++++Y + EK ++++ M++ ++
Sbjct: 195 RVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 254
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ I++ + K A ++++L S G Q+ + ++I AY R L + A+++
Sbjct: 255 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 314
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
E+++ + + + + GRI +A ++ + G ++ ++ ++ + +
Sbjct: 315 LHELKRPD----NIPRDTAIHILAGAGRIEEATYVFRQAIDAGXVKDITVFERMIHLLSK 370
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
K V +++ + PD V++AY + +EFD Y E + G V
Sbjct: 371 YKKYSNVVEVFDKXRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGCV 425
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 140/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 115 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 174
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E +++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 175 FWGMRKMGIEPSVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 234
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E +SR ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 235 TLEHEKANNLIQEMQSRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 291
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
++ ++I ++ V A+ L E L+ P+ + ++I G +E+ V
Sbjct: 292 QILFQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDTAIHILAGAGRIEEATYV 345
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ SK + Y V+V+++ G P A ++NAY +
Sbjct: 346 FRQAIDAGXVKDITVFERMIHLLSKYKKYSNVVEVFDKXRGLGYFPDSDVIAIVLNAYGK 405
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 406 LQEFDKANDVYMEMQEVG 423
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q + G E + +++ + + K+ ++++K++S+G+ +D + ++
Sbjct: 241 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIV 300
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P T ++ L +GR EA FR + G
Sbjct: 301 AYERAGLVAHAKRLLHELK--RPDNIPRDTAIH-----ILAGAGRIEEATYVFRQAIDAG 353
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I + + E+F + G D +V ++ Y + +K
Sbjct: 354 XVKDITVFERMIHLLSKYKKYSNVVEVFDKXRGLGYFPDSDVIAIVLNAYGKLQEFDKAN 413
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 414 DVYMEMQEVGCVFSD 428
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 191/446 (42%), Gaps = 8/446 (1%)
Query: 127 LVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIA 185
L + K++ + +SLS+ ++ + + T + L+ + + ++L + G +
Sbjct: 20 LAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPD 79
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
+ N+ M G ++ ++K+ + G +D Y ++ KIG++ L
Sbjct: 80 TITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLR 139
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
+ R ST + MY + D L K EA + +M +GI D Y +LI F
Sbjct: 140 MIEDR---STRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFC 196
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKIS 363
+ ++ A L E K + +P V + +L+ +EG V++ +++ M +K
Sbjct: 197 LLGQLMGAFSLLDEMILKNI--NPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPG 254
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+++G+ A +++ ++ G P +Y +IN C+ +A +
Sbjct: 255 VVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLR 314
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM K V Y+S++ K+GRI A+ L+ +M +G +V Y SL+D + +
Sbjct: 315 EMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQ 374
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
NL + L+ +M+ R + P +YT +I + + + + G ID
Sbjct: 375 NLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYT 434
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEG 569
+M+ K +E + + M+ G
Sbjct: 435 VMISGLCKEGMFDEALAIKSKMEDNG 460
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 159/431 (36%), Gaps = 74/431 (17%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
++L R ++ P+ +++ + G+ KD E AYD Y+E F P+ T LI
Sbjct: 135 VKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNE-AYDLYSEMDARGIF-PDAITYTTLI 192
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
+ SL ++ + N+ P + + L+ + + K A LL V +G
Sbjct: 193 YGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEG-- 250
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
G+V Y +M+ Y +G+ + +F
Sbjct: 251 ----------------------------IKPGVV----TYSTLMDGYCLVGEVQNAKQIF 278
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
++ +S Y I+ + L K R EA+ R+M K ++ D Y SLI
Sbjct: 279 HAMVQMGVNPNVYS---YNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 335
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
+ A L E +G D V+ Y
Sbjct: 336 CKSGRITSALNLMNEMHHRGQPAD-------VVTYT------------------------ 364
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
++++ K + A ++ ++ +G P TY ++I+ C+ A+++F
Sbjct: 365 ----SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQH 420
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+ KG V Y+ M++ K G +A+ + +KM+ GC PN + ++
Sbjct: 421 LLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDE 480
Query: 485 LRQVEKLWKEM 495
+ EKL EM
Sbjct: 481 NDKAEKLLHEM 491
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 41/252 (16%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA--------------LY 415
I+ +K + Y A+ + +Q+ +G VT +IN +C + L
Sbjct: 16 ILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLG 75
Query: 416 SKAEKVFIEMQQKGF-------------DKCV--------VAYSSMVAMYGKTGRIRDAM 454
+ + + + KG DK V V+Y +++ K G R A+
Sbjct: 76 YQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAV 135
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L+ ++ + PNV +YN+++D + K + + L+ EM+ R + PD ++YTT+I +
Sbjct: 136 KLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGF 195
Query: 515 NRAREFDMCVKFYNEF---RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+ +E +N GV I I++ K ++E LL M EG K
Sbjct: 196 CLLGQLMGAFSLLDEMILKNINPGV---YIYNILINALCKEGNVKEAKNLLAVMTKEGIK 252
Query: 572 LDERLYHSAMNA 583
Y + M+
Sbjct: 253 PGVVTYSTLMDG 264
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 85/214 (39%), Gaps = 4/214 (1%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
P + ++I L + K+ D ++L + N++PD T + L+ ++ + A
Sbjct: 287 NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALN 346
Query: 174 LLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L+ G+ A ++ + S + K ++ KMK GI Y +++
Sbjct: 347 LMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLC 406
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
K G + LF + + Y ++ L K G EAL M++ G +
Sbjct: 407 KGGRLKNAQELF---QHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIP 463
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ + +I S E AE+L E KG+L
Sbjct: 464 NAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 139/291 (47%), Gaps = 3/291 (1%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y ++ AY + G E+ + + L + F+ Y + + L K GR A
Sbjct: 4 YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFT---YNAIINGLCKKGRYARAKGILI 60
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+M G+ D + Y +L+ A+E+F E +G++ D L+ ++
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
+++ L MK L + I +++G+ + A+K+ ++++ QGC+ + Y
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
+I+N C+ + + A+K+F EM ++G +++++ + + G + A+ L M +
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+P++ YN+L+D + + + +LW M RK+ P+ ++Y +I+AY
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 291
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 148/342 (43%), Gaps = 48/342 (14%)
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
+ LS D YN L LV SC R F A + + G + L++F+S M
Sbjct: 65 IGLSPDTTTYNTL--------LVESC-RRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAV 115
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+++ ++ + MK G+V D+ Y +M Y
Sbjct: 116 FSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGY------------------------ 151
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
C ++G EALK +M E+G + D Y +++ + A++
Sbjct: 152 ----------C----RNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADK 197
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
LF E E+G L D L+ + ++G + K L + +M +K +++GF
Sbjct: 198 LFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFC 257
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A ++++ +IS+ P +TY +INAYC + S+A +++ M +KG +V
Sbjct: 258 KVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLV 317
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
++++ Y ++G A + +M AKG P+ YN+L++
Sbjct: 318 TCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 154/334 (46%), Gaps = 3/334 (0%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ +N+ +G Y + + + M G+ Y I+ K G + + +
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E + L +P +T +L +S + + EA + F +M +G++ D ++SL+ F+
Sbjct: 61 EMLNIGL--SPDTTTYNTLLVESCRRDNFS-EAKEIFGEMLRQGVVPDLVSFSSLMAVFS 117
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ A F++ ++ G++ D + L+ Y G + + L + + M +
Sbjct: 118 RNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVI 177
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
I+NG K + A K++++++ +G +P T+ ++I+ +C+ +KA +F M
Sbjct: 178 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 237
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
Q+ +VAY++++ + K G + A L M ++ PN Y L++ + ++
Sbjct: 238 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHV 297
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
+ +LW M + + P V+ TVI Y R+ +
Sbjct: 298 SEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGD 331
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 98/185 (52%)
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
VTY ++I AYCR L +A ++ M KG + Y++++ K GR A ++ +
Sbjct: 2 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M G P+ YN+L+ R N + ++++ EM R+ V PD VS++++++ ++R R
Sbjct: 62 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
D + ++ + + G V D I +++ + + + E +K+ +M +G LD Y++
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181
Query: 580 AMNAL 584
+N L
Sbjct: 182 ILNGL 186
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 124/262 (47%)
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
L+ Y EGL+E+ +++ SM + LK S AI+NG K+ Y A + ++++ G
Sbjct: 7 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 66
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
P TY +++ CR +S+A+++F EM ++G +V++SS++A++ + + A+
Sbjct: 67 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQAL 126
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
MK G P+ IY LM + R N+ + K+ EM + D ++Y T+++
Sbjct: 127 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 186
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ + K ++E G + D ++ + + + + L M K D
Sbjct: 187 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDI 246
Query: 575 RLYHSAMNALRDAGLQMQAQWL 596
Y++ ++ G +A L
Sbjct: 247 VAYNTLIDGFCKVGEMEKASEL 268
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/479 (20%), Positives = 200/479 (41%), Gaps = 52/479 (10%)
Query: 149 LPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTI- 206
LP +T S L+ C RAR+ +A + G A ++ +S + G +
Sbjct: 100 LPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
+++ +M G V D+ Y ++++ G S+ A L ++ P + +Y +
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQW-ALDILRMAVKQGGGCPCNVVVYSTVV 218
Query: 267 DSLGKSGRAFEALKFFRDM--------------------------KEKGILE-------- 292
L K G+ EA F +M K +GIL
Sbjct: 219 HGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQ 278
Query: 293 -DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
D Y +LI ++++ + K A +FKE +G++ + C V + G +E+ +
Sbjct: 279 PDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREF 338
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+SM K++ +++G++ ++ ++ G +P Q + ++N Y +
Sbjct: 339 FDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAK 398
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ +A +F +MQ++G + V+ Y +++ + + G + DAM M KG EPN +
Sbjct: 399 CGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAV 458
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS-------AYNRAREFDMCV 524
Y L+ +L + E+L E+ + + P +S+ ++I+ + R FDM +
Sbjct: 459 YQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMII 518
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ G D I ++ + + ++ E ++ M S G + D Y + +N
Sbjct: 519 R-------TGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNG 570
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 115/555 (20%), Positives = 227/555 (40%), Gaps = 37/555 (6%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTL-KLLIRYLVQSKKWDS 135
VPDA + + L + D ++Q A D A K P + ++ L + K
Sbjct: 171 VPDAISYSTVLKSVCDDGRSQ-WALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGE 229
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMG 194
L + V P+ T + ++ + +AR A +L+ + +G + + +N+ +
Sbjct: 230 ACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIH 289
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY-KIGDSEKVAALF--LECKSRK 251
GY+ L + + ++++M S G++ ++ C A+ K G E+ F + K K
Sbjct: 290 GYSTLGQWKQAVRMFKEMTSRGVIPNT-VTCSTFVAFLCKHGRIEEAREFFDSMLAKGHK 348
Query: 252 LDSTPFST------------------------------HMYKILCDSLGKSGRAFEALKF 281
L+ +ST H++ IL + K G EA+
Sbjct: 349 LNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFI 408
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
F DM+++G+ D Y ++I +F + + A + F +KG+ + V L+ +
Sbjct: 409 FEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCT 468
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
G + K ++V ++N L +++N K + A ++++ +I G
Sbjct: 469 HGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNI 528
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ S+I+ YC I S+A +V M G + +V Y ++V K GRI D + L ++
Sbjct: 529 FTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELL 588
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
KG +P + Y ++D A +++++EM + +Y+ +++ R +
Sbjct: 589 HKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTE 648
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
+ + + D I IM+ K + EE L + G + Y M
Sbjct: 649 EAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMM 708
Query: 582 NALRDAGLQMQAQWL 596
L G +A+ +
Sbjct: 709 ENLIKEGSVEEAEGV 723
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 2/205 (0%)
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVF-IEMQQKGFDKC-VVAYSSMVAM 443
++ ++ GC+P ++Y++++ + C A + + ++Q G C VV YS++V
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K G++ +A L +M +G PNV YNS++ +A+ + + + + ++M V PD
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
V+Y T+I Y+ ++ V+ + E G + + V K +IEE +
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340
Query: 564 DMKSEGTKLDERLYHSAMNALRDAG 588
M ++G KL+ Y + ++ AG
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAG 365
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 99/508 (19%), Positives = 190/508 (37%), Gaps = 76/508 (14%)
Query: 66 ELNRDSHHQTAVPDAKKFDSFLHGMLKD---PQTQELAYDYYNEAKKLPEFRPEKSTLKL 122
+L + Q P+ ++S +H + K + Q + +P+ T
Sbjct: 232 DLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNG-----VQPDNVTYNT 286
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVR------ARKFKIA----- 171
LI +W V + ++ V+P+ TCS VA + AR+F +
Sbjct: 287 LIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKG 346
Query: 172 --------NTLLQVFITDGEIALLA-----------------FNSAMGGYNKLHMYYSTI 206
+TLL + T G + ++ FN + GY K M +
Sbjct: 347 HKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAM 406
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST---------PF 257
++E M+ G+ D Y ++ A+ ++G + F + ++ F
Sbjct: 407 FIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGF 466
Query: 258 STH---------MYKI--------------LCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
TH +Y+I L + L K GR FEA + F + G D
Sbjct: 467 CTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADV 526
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
+I+ SLI + I ++ A + G+ D LV + G ++ L +
Sbjct: 527 NIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRE 586
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
+ + +K + I++G AA ++++++I G TY+ ++ CR
Sbjct: 587 LLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNC 646
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+A VF ++ +V + M++ K R +A L A + G P V Y
Sbjct: 647 TEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTI 706
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+M+ + ++ + E ++ M + ++P
Sbjct: 707 MMENLIKEGSVEEAEGVFSVMLKSGLSP 734
>gi|297849166|ref|XP_002892464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338306|gb|EFH68723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/495 (19%), Positives = 204/495 (41%), Gaps = 47/495 (9%)
Query: 111 PEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKI 170
P ++ T ++ L + K L E +N +P +CS LV R +
Sbjct: 94 PITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDK 153
Query: 171 ANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
A +L++ + G + + +N +G K S +++ E M +G D Y ++
Sbjct: 154 AMVILRIMVMSGGVPDTITYNMIIGNLCKKGHIRSALVLLEDMSLSGSPPDVITYNTVIR 213
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
+ G++E+ + K + + P Y +L + + + + A+ DM +G
Sbjct: 214 CMFDHGNAEQAIRFW---KDQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLEDMAVEG 270
Query: 290 ILEDPSIYASLI---CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
D Y SL+ C ++ EV L
Sbjct: 271 CYPDIVTYNSLVNYNCRRGNLEEVAL---------------------------------- 296
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC-IPGQVTYASI 405
V++ + + L+++ +++ YW V+ ++ Q P +TY +
Sbjct: 297 ----VIQHILSHGLELNTVTYNTLLHSLCSNE-YWDEVEEILNIMYQTSYCPTVITYNIL 351
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
IN C+ L S+A F +M ++ +V Y++++ K G + DA+ L+ +K+ C
Sbjct: 352 INGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAMSKEGMVDDAIELLGLLKSTSC 411
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVK 525
P + YNS++D R +++ +L+ M ++PD ++ ++I + RA + +
Sbjct: 412 LPGLITYNSVIDGLARKGLMKKALELYHHMLDAGISPDDITRRSLIYGFCRANLVEEASQ 471
Query: 526 FYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALR 585
E G I + +++ K ++E +++++ M + G K DE +Y + + +
Sbjct: 472 VLKETSNRGNGIRGSTYRLVIQGLCKKREMEMAIEVVEIMLTSGCKPDETIYTAIVKGVE 531
Query: 586 DAGLQMQAQWLQQNF 600
+ G+ +A LQ+
Sbjct: 532 EMGMGSEAVQLQKKL 546
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Glycine max]
Length = 1078
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 196/455 (43%), Gaps = 6/455 (1%)
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL-- 186
+S ++L + + LPD T + L+A + K A L I G ++
Sbjct: 607 RSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNP 666
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+ S + G K + + ++E+M + + D+ + I++ Y + G + KV +
Sbjct: 667 AVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILST 726
Query: 247 CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFAS 306
KS+ L F+ Y IL K ++DM G L D + SLI +
Sbjct: 727 MKSKNL---CFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQ 783
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
+A ++ + +G + D L+ + E ++K ++V+ M + +
Sbjct: 784 SKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDT 843
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
A+ NG + + A +V + L+ G +P Y ++IN CR+ A K+ EM+
Sbjct: 844 YNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMK 903
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
G VA S++V + +I +A+W++ M P V + +LM ++ + N+
Sbjct: 904 TLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVA 963
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ +L ME V D V+Y +IS + + K Y E + + +I +++
Sbjct: 964 KALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLI 1023
Query: 547 GVFSKLSQIEELVKLLQDMKS-EGTKLDERLYHSA 580
F + E KLL+D++ E +L+++ +S+
Sbjct: 1024 DSFCAGNYQIESEKLLRDIQDRELMRLNQQFCYSS 1058
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 111/523 (21%), Positives = 213/523 (40%), Gaps = 38/523 (7%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAKKLPEFR---PEKSTLKLLIRYLVQSKKWDSIVSL 139
FD + L++ + +Y L FR P T +++ LV+ +K D S
Sbjct: 108 FDLLIRVCLRNRMVGDAVQTFY-----LMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSF 162
Query: 140 SEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNK 198
+ + PD T + L+ + KFK A LL+ G + +N+ + Y K
Sbjct: 163 FKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCK 222
Query: 199 LHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFS 258
Y + + + M S GI +D Y ++ + DS L + R+ P +
Sbjct: 223 KGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCR--DSRSAKGYLLLKRMRRNMVYP-N 279
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
Y L + G+ A K F +M +L + Y +LI + + A L
Sbjct: 280 EITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMD 339
Query: 319 EAEEKGMLRDPEVCLKLVLMYI----EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
G LR EV +L + E G+V ++E M+ +++S A+++G
Sbjct: 340 VMVSHG-LRPNEVTYGALLNGLYKNAEFGMVS---SILERMRMGGVRVSHISYTAMIDGL 395
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K AV++ + ++ P VT++ +IN + R+ + A+++ +M + G
Sbjct: 396 CKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNG 455
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ YS+++ Y K G +++A+ A M G + + N L+ R L + E
Sbjct: 456 ILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNH 515
Query: 495 MERRKVTPDKVSYTTVISAYNRARE-------FDMCVKF--YNEFRMNGGVIDRAIAGIM 545
M R + P+ V++ +I+ Y + + FD F + GG++ G+
Sbjct: 516 MSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLK----GLC 571
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+G I E +K ++ +D ++++ + + +G
Sbjct: 572 IG-----GHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSG 609
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 103/505 (20%), Positives = 197/505 (39%), Gaps = 46/505 (9%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + T LI V+ K + + ++ ++N+LP++ T + L+A A L
Sbjct: 278 PNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRL 337
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ V ++ G + + + + G K + + E+M+ G+ + Y +++ K
Sbjct: 338 MDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCK 397
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G E+ L + K+ P + +L + + G+ A + M + G++ +
Sbjct: 398 NGMLEEAVQLLDD--MLKVSVNP-DVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPN 454
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
+Y++LI ++ + +K A + G + D C LV + G +E+ +
Sbjct: 455 GILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMN 514
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII------- 406
M L + I+NG+ A V++++ S G P TY ++
Sbjct: 515 HMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGG 574
Query: 407 ----------------------------NAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ CR S A + EM F Y+
Sbjct: 575 HINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYT 634
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKG-CEPNVWIYNSLMD---MHGRAKNLRQVEKLWKE 494
+++A K G+I A+ L K KG PN +Y SL+D HG A R +++E
Sbjct: 635 NLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHA---RAALYIFEE 691
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M + V PD V++ +I Y+R + + + + A I++ ++K
Sbjct: 692 MLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHA 751
Query: 555 IEELVKLLQDMKSEGTKLDERLYHS 579
+ L +DM G D+ +HS
Sbjct: 752 MARCFMLYKDMIRHGFLPDKFSWHS 776
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 97/539 (17%), Positives = 213/539 (39%), Gaps = 48/539 (8%)
Query: 63 PTIELNRDSH---HQTAVPDAKKFDSF----LHGMLKDPQTQELAYDYYNEAKKLPEFRP 115
P +ELN +H T + + +F L +L+ P + E + P
Sbjct: 46 PNLELNHVTHIICTTTHILVRARMYNFAKTTLKHLLQLPIGLNSVFGALMETYPICNSNP 105
Query: 116 EKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL 175
+ LLIR ++++ V + P +TC+ ++ S V+ +K + +
Sbjct: 106 --AVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFF 163
Query: 176 QVFITDGEIALLA-FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
+ + G +A FN + + + + + KM+ +G+ + Y ++ Y K
Sbjct: 164 KGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKK 223
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
G K A+ ++C + K T Y + D+L + R+ + + M+ + +
Sbjct: 224 G-RYKAASQLIDCMASKGIGVDVCT--YNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNE 280
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
Y +LI F ++++A ++F E +L + S
Sbjct: 281 ITYNTLISGFVREGKIEVATKVFDEMSLFNLLPN-------------------------S 315
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
+ L C + I A+++ + ++S G P +VTY +++N + A
Sbjct: 316 ITYNTLIAGHCTTGNI----------GEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAE 365
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+ + M+ G ++Y++M+ K G + +A+ L+ M P+V ++
Sbjct: 366 FGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSV 425
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L++ R + +++ +M + + P+ + Y+T+I Y + + Y +G
Sbjct: 426 LINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSG 485
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
V D ++V F + ++EE + M G + + +N ++G ++A
Sbjct: 486 HVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKA 544
>gi|356558071|ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Glycine max]
Length = 647
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 165/380 (43%), Gaps = 25/380 (6%)
Query: 141 EDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKL 199
ED K + PD T + ++ ++ K A L Q + G L+ +N+ + K
Sbjct: 255 EDMKRRHCEPDVFTYTIMIRMTGKSSKTDEALALFQAMLAKGCTPNLIGYNTMIEALAKG 314
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP--- 256
M +L++ KM I + Y I+ L E K KLD+
Sbjct: 315 RMVDKAVLLFSKMVENDIQPNEFTYSVILNL------------LVAEGKLNKLDNIVDIS 362
Query: 257 ---FSTHMYKILCDSLGKSGRAFEALKFFRDM---KEKGILEDPSIYASLICSFASITEV 310
+ +Y +L K G A EA + F +M +KG D S++ S S ++
Sbjct: 363 KKYINKQIYAYFVRTLSKVGHASEAHRLFCNMWNFHDKG---DKDACMSMLESLCSAGKM 419
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
A +L + EKG+ D + + + D+ E MK +
Sbjct: 420 TEAIDLLNKIHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPPDIFTYNIL 479
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++ F + AVK +E+L + C P ++Y S+IN + +A F EMQ+KG
Sbjct: 480 ISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGL 539
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+ VV YS+++ +GKT ++ A L +M A+ C PN+ YN L+D R+ +
Sbjct: 540 NPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEECTPNLITYNILLDCLERSGRTAEAVD 599
Query: 491 LWKEMERRKVTPDKVSYTTV 510
L+ +++++ +TPD ++Y +
Sbjct: 600 LYAKLKQQGLTPDSITYAVL 619
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 185/430 (43%), Gaps = 50/430 (11%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA--LFLECKSRKLDSTPFSTHMYKIL 265
VY M G LD Y +++A K EKV + +F + K R + F+ Y I+
Sbjct: 219 VYLDMIRHGYRLDIFGYNMLLDALAK---DEKVCSYKVFEDMKRRHCEPDVFT---YTIM 272
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
GKS + EAL F+ M KG + Y ++I + A V A LF + E
Sbjct: 273 IRMTGKSSKTDEALALFQAMLAKGCTPNLIGYNTMIEALAKGRMVDKAVLLFSKMVEND- 331
Query: 326 LRDPEVCLKLVL-MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK-------R 377
++ E ++L + + EG + K ++V+ +K I+ I V SK
Sbjct: 332 IQPNEFTYSVILNLLVAEGKLNKLDNIVDI---SKKYINKQIYAYFVRTLSKVGHASEAH 388
Query: 378 RGY---W-------------------------AAVKVYEQLISQGCIPGQVTYASIINAY 409
R + W A+ + ++ +G + Y ++ A
Sbjct: 389 RLFCNMWNFHDKGDKDACMSMLESLCSAGKMTEAIDLLNKIHEKGITTDTIMYNTVFTAL 448
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
R+ S ++ +M+Q G + Y+ +++ +G+ GR+ A+ +++ C+P+V
Sbjct: 449 GRLKQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEELENSDCKPDV 508
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
YNSL++ G+ ++ + +KEM+ + + PD V+Y+T+I + + + +M + ++E
Sbjct: 509 ISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDE 568
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ I++ + + E V L +K +G D Y + + L+ G
Sbjct: 569 MLAEECTPNLITYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY-AVLERLQSGG- 626
Query: 590 QMQAQWLQQN 599
+ ++ +QN
Sbjct: 627 HGKLRFRRQN 636
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 170/379 (44%), Gaps = 5/379 (1%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+NS + +++ + I + E M A I Y ++ A G+ +K L CK
Sbjct: 49 YNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALEL---CK 105
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ + I+ +L + +A+ +F MK + D +I I
Sbjct: 106 KMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIG 165
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCI 366
+ A ELF E+ P+V +M Y G VE + + M +K +
Sbjct: 166 QCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVA 225
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
+++ ++ R + A+ ++ + G P V+Y S++NAY R A KA +VF +M+
Sbjct: 226 YNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK 285
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+ V+Y++++ YG G +++A+ L+ +M+ G +P+V ++L+ GR + +
Sbjct: 286 KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQIT 345
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
++E + + R + + V+Y + I +Y +++ ++ Y R + D I++
Sbjct: 346 RIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILI 405
Query: 547 GVFSKLSQIEELVKLLQDM 565
SKL + E ++ +DM
Sbjct: 406 SGSSKLGKYTESLRFFEDM 424
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 159/363 (43%), Gaps = 7/363 (1%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y ++ Y + ++ LF E + + +Y L + ++G+ A+
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKP---DADIYNSLIHAHSRAGQWRWAINIME 70
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
DM I + Y ++I + + K A EL K+ E G+ D V +VL ++ G
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDL-VTHNIVLSALKNG 129
Query: 344 L-VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ--GCIPGQV 400
K + E MK A + I++ K A++++ + + C P V
Sbjct: 130 AQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVV 189
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TY SI+++YC + +F M +G +VAY+S++ Y G R+A+ + +
Sbjct: 190 TYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
K G P++ Y SL++ +GR+ + +++ +M++ P+KVSY +I AY A
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGML 309
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
V +E +G D ++ + QI + +L+ +S G L+ Y+S
Sbjct: 310 KEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSG 369
Query: 581 MNA 583
+ +
Sbjct: 370 IKS 372
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 194/488 (39%), Gaps = 25/488 (5%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P+ LI ++ +W +++ ED + P T + ++ +C A +K A
Sbjct: 43 KPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALE 102
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L + +G L+ N + Y I +E MK A + D+ I+
Sbjct: 103 LCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLV 162
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
KIG + LF + R+ P Y + S G+ F M +G+
Sbjct: 163 KIGQCGEAIELFNSMRERRTKCPP-DVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKP 221
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ Y SL+ ++AS + A +F ++ G+ D L+ Y EK +V
Sbjct: 222 NIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVF 281
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
MK K + A+++ + AV + ++ G P V+ ++++ A R
Sbjct: 282 NKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRC 341
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
++ E + + +G D VAY+S + Y G A+ L M+ +P+ Y
Sbjct: 342 RQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTY 401
Query: 473 NSLM-----------------DM------HGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
N L+ DM + L + E + M++ PD ++YTT
Sbjct: 402 NILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTT 461
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+I AYN + + E +NG D I ++ F+K + E +++L++ MK +
Sbjct: 462 LIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKS 521
Query: 570 TKLDERLY 577
L+++ Y
Sbjct: 522 IPLNQKSY 529
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 169/400 (42%), Gaps = 18/400 (4%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + S L+ + Q ++ A + +N+ KK +P K + LI + V
Sbjct: 256 PDIVSYTSLLNAYGRSAQPEK-AREVFNKMKK-NSCKPNKVSYNALIDAYGSAGMLKEAV 313
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L + + + PD + S L+A+C R R+ T+L+ + G ++ +A+NS + Y
Sbjct: 314 GLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSY 373
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
Y + +Y M+ + + D+ Y ++ K+G + F + K+ ST
Sbjct: 374 LSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSST- 432
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
K G+ EA F MK+ G D Y +LI ++ + K A +L
Sbjct: 433 --------------KEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDL 478
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
FKE E G+ D +C L+ + + G E+ L ++E MK + ++ I+ +
Sbjct: 479 FKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTM 538
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
R + A ++ E L S T ++N + K+F +M +
Sbjct: 539 IRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLST 598
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
Y+ ++ G+ R + ++ M+ G P ++++ +++
Sbjct: 599 YAVVLRNLLVVGKWRKYIEVLQWMEDSGVHPTLYMFQNVL 638
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 135/311 (43%), Gaps = 8/311 (2%)
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
IY +I +A +V A LF E +E D ++ L+ + G ++++E M
Sbjct: 13 IYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDM 72
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
A + + ++N + A+++ +++ G P VT+ +++A A Y
Sbjct: 73 LRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQY 132
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK--GCEPNVWIYN 473
SKA F M+ + ++ K G+ +A+ L M+ + C P+V Y
Sbjct: 133 SKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYT 192
Query: 474 SLMD---MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
S+M ++G+ +N + + L M V P+ V+Y +++ AY + +N
Sbjct: 193 SIMHSYCIYGQVENCKAIFDL---MVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
+ NG D ++ + + +Q E+ ++ MK K ++ Y++ ++A AG+
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGML 309
Query: 591 MQAQWLQQNFE 601
+A L E
Sbjct: 310 KEAVGLLHEME 320
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 170/379 (44%), Gaps = 5/379 (1%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
+NS + +++ + I + E M A I Y ++ A G+ +K L CK
Sbjct: 49 YNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALEL---CK 105
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ + I+ +L + +A+ +F MK + D +I I
Sbjct: 106 KMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIG 165
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCI 366
+ A ELF E+ P+V +M Y G VE + + M +K +
Sbjct: 166 QCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVA 225
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
+++ ++ R + A+ ++ + G P V+Y S++NAY R A KA +VF +M+
Sbjct: 226 YNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK 285
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+ V+Y++++ YG G +++A+ L+ +M+ G +P+V ++L+ GR + +
Sbjct: 286 KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQIT 345
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
++E + + R + + V+Y + I +Y +++ ++ Y R + D I++
Sbjct: 346 RIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILI 405
Query: 547 GVFSKLSQIEELVKLLQDM 565
SKL + E ++ +DM
Sbjct: 406 SGSSKLGKYTESLRFFEDM 424
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 159/363 (43%), Gaps = 7/363 (1%)
Query: 224 YCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFR 283
Y ++ Y + ++ LF E + + +Y L + ++G+ A+
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKP---DADIYNSLIHAHSRAGQWRWAINIME 70
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
DM I + Y ++I + + K A EL K+ E G+ D V +VL ++ G
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDL-VTHNIVLSALKNG 129
Query: 344 L-VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ--GCIPGQV 400
K + E MK A + I++ K A++++ + + C P V
Sbjct: 130 AQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVV 189
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TY SI+++YC + +F M +G +VAY+S++ Y G R+A+ + +
Sbjct: 190 TYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
K G P++ Y SL++ +GR+ + +++ +M++ P+KVSY +I AY A
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGML 309
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
V +E +G D ++ + QI + +L+ +S G L+ Y+S
Sbjct: 310 KEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSG 369
Query: 581 MNA 583
+ +
Sbjct: 370 IKS 372
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 154/392 (39%), Gaps = 2/392 (0%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P+ LI ++ +W +++ ED + P T + ++ +C A +K A
Sbjct: 43 KPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALE 102
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
L + +G L+ N + Y I +E MK A + D+ I+
Sbjct: 103 LCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLV 162
Query: 233 KIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
KIG + LF + R+ P Y + S G+ F M +G+
Sbjct: 163 KIGQCGEAIELFNSMRERRTKCPP-DVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKP 221
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ Y SL+ ++AS + A +F ++ G+ D L+ Y EK +V
Sbjct: 222 NIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVF 281
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
MK K + A+++ + AV + ++ G P V+ ++++ A R
Sbjct: 282 NKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRC 341
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
++ E + + +G D VAY+S + Y G A+ L M+ +P+ Y
Sbjct: 342 RQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTY 401
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
N L+ + + + +++M KV+ K
Sbjct: 402 NILISGSSKLGKYTESLRFFEDMVDSKVSSTK 433
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 135/311 (43%), Gaps = 8/311 (2%)
Query: 296 IYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
IY +I +A +V A LF E +E D ++ L+ + G ++++E M
Sbjct: 13 IYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDM 72
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
A + + ++N + A+++ +++ G P VT+ +++A A Y
Sbjct: 73 LRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQY 132
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK--GCEPNVWIYN 473
SKA F M+ + ++ K G+ +A+ L M+ + C P+V Y
Sbjct: 133 SKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYT 192
Query: 474 SLMD---MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
S+M ++G+ +N + + L M V P+ V+Y +++ AY + +N
Sbjct: 193 SIMHSYCIYGQVENCKAIFDL---MVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
+ NG D ++ + + +Q E+ ++ MK K ++ Y++ ++A AG+
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGML 309
Query: 591 MQAQWLQQNFE 601
+A L E
Sbjct: 310 KEAVGLLHEME 320
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 5/210 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + S L+ + Q ++ A + +N+ KK +P K + LI + V
Sbjct: 256 PDIVSYTSLLNAYGRSAQPEK-AREVFNKMKK-NSCKPNKVSYNALIDAYGSAGMLKEAV 313
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGY 196
L + + + PD + S L+A+C R R+ T+L+ + G ++ +A+NS + Y
Sbjct: 314 GLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSY 373
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
Y + +Y M+ + + D+ Y ++ K+G + F + K+ ST
Sbjct: 374 LSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTK 433
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
+ L +SLG R + K+ RD K
Sbjct: 434 EFLWTIRWLEESLGPVQR--DGSKWIRDWK 461
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 173/392 (44%), Gaps = 41/392 (10%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
+L+ L + K D + + +D K + PD +T + ++ + K + TL Q
Sbjct: 265 MLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEK 324
Query: 182 GEIA-LLAFNSAMGGYNKLHMYYSTILVYEKM--KSAGIVLDSGCYCQIMEAYYKIGDSE 238
G L+A+N+ + M TI ++ KM + + ++ Y ++ K+G +
Sbjct: 325 GYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLGHAS 384
Query: 239 KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
+ LF S + Y + +SL +G+ EAL + EK I D +Y
Sbjct: 385 EAHRLFCNMWSFHDEG---DRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYN 441
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
+++ + + + +L+++ ++ G P++ +L
Sbjct: 442 TVLSALGKLKKTSDLHDLYEKMKQDG--PSPDIFSYNIL--------------------- 478
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
++ F + AVK++E+L + C P +++ S+IN + +A
Sbjct: 479 ------------ISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEA 526
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
F EM+++G VV YS+++ +GKT ++ A L +M A+GC PN+ YN L+D
Sbjct: 527 HMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDC 586
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
R+ + L+ +++++ +TPD ++Y +
Sbjct: 587 LERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 618
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 167/379 (44%), Gaps = 7/379 (1%)
Query: 219 LDSGCYCQ--IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
L CY +++A+ + +S K +++E + R F+ Y +L D+L K +
Sbjct: 221 LQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFA---YNMLLDALAKDNKVD 277
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
+ F+DMK K D Y +I I + + LF+E EKG + ++
Sbjct: 278 QVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMI 337
Query: 337 LMYIEEGLVEKTLDVVESM--KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
+V+KT+ + M + + ++ I +V SK A +++ + S
Sbjct: 338 QALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFH 397
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
+ Y S++ + C ++A + ++ +K V Y+++++ GK + D
Sbjct: 398 DEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLH 457
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L KMK G P+++ YN L+ GRA + + K+++E+E PD +S+ ++I+
Sbjct: 458 DLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCL 517
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ + D + E R G D ++ F K ++E +L +M +EG +
Sbjct: 518 GKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNI 577
Query: 575 RLYHSAMNALRDAGLQMQA 593
Y+ ++ L +G +A
Sbjct: 578 VTYNILLDCLERSGRTAEA 596
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 178/391 (45%), Gaps = 43/391 (10%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VY +++ G LD Y +++A K ++V +F + K + + ++ Y I+
Sbjct: 247 VYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYT---YTIMIR 303
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK----LAEELFKEAEEK 323
GK G+A E+L F++M EKG + Y ++I + A+ V L ++ E K
Sbjct: 304 MTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNK 363
Query: 324 GMLRDPEVCLKLVLM-----------------YIEEGLVEKTLDVVESMKNAKLKISDCI 366
M + L L + +EG + + ++ES+ +A K ++ +
Sbjct: 364 FMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAG-KTTEAL 422
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
K++E+ IS V Y ++++A ++ S ++ +M+
Sbjct: 423 DLL--------------SKIHEKRISTD----TVMYNTVLSALGKLKKTSDLHDLYEKMK 464
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
Q G + +Y+ +++ +G+ GR+ +A+ + +++ C+P++ +NSL++ G+ ++
Sbjct: 465 QDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDID 524
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ +KEM ++PD V+Y+T+I + + + +M + ++E G + I++
Sbjct: 525 EAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILL 584
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ + E V L +K +G D Y
Sbjct: 585 DCLERSGRTAEAVDLYAKLKQQGLTPDSITY 615
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 198/498 (39%), Gaps = 49/498 (9%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +LI + K D+ +S + + P + + L+ + A +L
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESL 459
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
+ I E ++ + S MGGY + +Y +M GIV + ++ ++
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFR 519
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G LF E + + Y ++ + + G +A +F +M EKGI+ D
Sbjct: 520 AGLIRDAVKLFTEMAEWNVKPNRVT---YNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPD 576
Query: 294 PSIYASLI---CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM-YIEEGLVEKTL 349
Y LI C +E K+ F + KG E+C +L + EG +E+ L
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKV----FVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 350 DV-----------------------------------VESMKNAKLKISDCISCAIVNGF 374
V ++ M + LK D I ++++
Sbjct: 633 SVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAK 692
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
SK + A +++ +I++GC+P +VTY ++IN C+ ++AE + +M+
Sbjct: 693 SKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQ 752
Query: 435 VAYSSMVAMYGK-TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V Y + + K G ++ A+ L + KG N YN L+ R + + +L
Sbjct: 753 VTYGCFLDILTKGVGDMKKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRMEEASELIT 811
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
M V+PD ++YTT+IS R + ++ +N G DR ++
Sbjct: 812 RMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871
Query: 554 QIEELVKLLQDMKSEGTK 571
++ + +L +M +G K
Sbjct: 872 EMGKATELRNEMLRQGLK 889
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 199/483 (41%), Gaps = 18/483 (3%)
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA----NTLLQV 177
+LI L + +K V + +D + PD T LV + ++F++ + +L++
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRL 326
Query: 178 FITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
+ E A+ +S + G K + + +++ G+ + Y ++++ K +
Sbjct: 327 RFSPSEAAV---SSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNF 383
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
++ LF + K+ P Y IL D + G+ AL F +M + G+ PS+Y
Sbjct: 384 DEAELLFD--RMGKIGLCPNDV-TYSILIDMFCRRGKLDTALSFLGEMIDMGL--KPSVY 438
Query: 298 A--SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVE 353
SLI ++ AE L E K + +P V LM Y +G + K L +
Sbjct: 439 PYNSLINGHCKFGDISAAESLMAEMINKKL--EPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M + S +++G + AVK++ ++ P +VTY +I YC
Sbjct: 497 EMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEG 556
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
SKA + EM +KG +Y ++ TG+ +A V + CE N Y
Sbjct: 557 NMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
L+ R L + + ++M R V D V Y +I + ++ + + E
Sbjct: 617 GLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDR 676
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G D I M+ SK +E + M +EG +E Y + +N L AG +A
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 594 QWL 596
+ L
Sbjct: 737 EIL 739
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 122/261 (46%), Gaps = 1/261 (0%)
Query: 271 KSGRAFEALKFFRDMKEK-GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
+S R + + F+ M K +L + ++L+ LA ELF + G+ D
Sbjct: 168 RSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDV 227
Query: 330 EVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ 389
+ ++ E + + +++ M+ ++ +++G K++ W AV + +
Sbjct: 228 YIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKD 287
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
L + P VTY +++ C++ + ++ EM + F A SS+V K G+
Sbjct: 288 LAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGK 347
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
+ +A+ LV ++ G PN+++YN+L+D + +N + E L+ M + + P+ V+Y+
Sbjct: 348 VEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSI 407
Query: 510 VISAYNRAREFDMCVKFYNEF 530
+I + R + D + F E
Sbjct: 408 LIDMFCRRGKLDTALSFLGEM 428
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 103/495 (20%), Positives = 214/495 (43%), Gaps = 20/495 (4%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+ + +D + PD + + + G+ K Q E+ + +E +L F P ++ + L+
Sbjct: 282 VGIKKDLAGKELKPDVVTYCTLVCGLCK-VQEFEVGLEMIDEMLRL-RFSPSEAAVSSLV 339
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
L + K + ++L + + V P+ + L+ S + R F A L F G+I
Sbjct: 340 EGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELL---FDRMGKI 396
Query: 185 AL----LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKV 240
L + ++ + + + + + +M G+ Y ++ + K GD
Sbjct: 397 GLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAA 456
Query: 241 AALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA-- 298
+L E ++KL+ T + Y L G+ +AL+ + +M KGI+ PSIY
Sbjct: 457 ESLMAEMINKKLEPTVVT---YTSLMGGYCSKGKINKALRLYHEMTGKGIV--PSIYTFT 511
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
+L+ ++ A +LF E E + + ++ Y EEG + K + + M
Sbjct: 512 TLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEK 571
Query: 359 KLKISDCISC-AIVNGFSKRRGYWAAVKVYEQLISQG-CIPGQVTYASIINAYCRIALYS 416
+ + D S +++G G + KV+ + +G C ++ Y +++ +CR
Sbjct: 572 GI-VPDTYSYRPLIHGLC-LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+A V +M +G D +V Y ++ K + + L+ +M +G +P+ IY S++
Sbjct: 630 EALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMI 689
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D + + ++ +W M P++V+YT VI+ +A + ++ R V
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSV 749
Query: 537 IDRAIAGIMVGVFSK 551
++ G + + +K
Sbjct: 750 PNQVTYGCFLDILTK 764
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/294 (19%), Positives = 117/294 (39%), Gaps = 3/294 (1%)
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
L+ CY ++ + + G E+ ++ C+ L Y +L D K
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSV---CQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVF 666
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
L ++M ++G+ D IY S+I + + + K A ++ +G + + ++
Sbjct: 667 LGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+ G V + + M+ + ++ +K G I +G +
Sbjct: 727 LCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLAN 786
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
TY +I +CR +A ++ M G + Y++M++ + ++ A+ L
Sbjct: 787 TATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWN 846
Query: 459 KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
M KG P+ YN+L+ A + + +L EM R+ + P+ + T IS
Sbjct: 847 SMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/446 (20%), Positives = 190/446 (42%), Gaps = 23/446 (5%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPE------FRPEKSTLKLLIRYLVQS 130
+PD F+ ++G+ + + +E KL + F P T +L+ L +
Sbjct: 275 LPDVDTFNDVIYGLCR--------LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRV 326
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDG-EIALLA 188
K D L N D H + L+ V++ + AN L I +G +
Sbjct: 327 GKVDEAQVLLNKVPTPN---DVHF-TILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFT 382
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
FN+ + G K + S + + M + G + Y +++ + K E+ + E
Sbjct: 383 FNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMS 442
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
++ + + Y +L +L K+G+ +AL +M +KG D + +LI +
Sbjct: 443 AKGFE---LNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVD 499
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+ A L+++ G++ + L+ ++ G +++ L +V M + +
Sbjct: 500 RKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYN 559
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++ F K A+ ++++++ + +P ++ +IN CR+ A ++ +M +
Sbjct: 560 GLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHR 619
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G VV Y+S++ K G IR+A L K++A+G +P+ YN+L+ H RA
Sbjct: 620 GLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDA 679
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAY 514
L P+ V++ ++S +
Sbjct: 680 YLLLLRGVENAFIPNDVTWYILVSNF 705
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 169/391 (43%), Gaps = 10/391 (2%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ +M S G++ + +M+A + + + +L + K P S +Y+ L
Sbjct: 195 VFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRD--MTKHGCVPNSV-VYQTLIH 251
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+L K R EALK +M G L D + +I + + +L +G
Sbjct: 252 ALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGF-- 309
Query: 328 DPEVCLKLVLMYIEEGLVE-KTLDVVESMKNAKLKISDCISCAIVNGFSKR-RGYWAAVK 385
P VLM GL +D + + N +D ++NG+ K R A
Sbjct: 310 TPNDITYGVLM---NGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAF 366
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+Y+++I GC P T+ ++I+ C+ L A + +M G ++ Y++++ +
Sbjct: 367 LYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFC 426
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
K ++ +A +++ +M AKG E N+ YN L+ + + + + EM + PD
Sbjct: 427 KKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIF 486
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
++ T+I + + + Y + ++G + + ++ F + I+E +KL+ DM
Sbjct: 487 TFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDM 546
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
G LDE Y+ + A G +A L
Sbjct: 547 LFRGCPLDEITYNGLIKAFCKLGATEKALGL 577
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/467 (19%), Positives = 189/467 (40%), Gaps = 9/467 (1%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T ++++ L + D+ SL D + +P++ L+ + + + A L
Sbjct: 206 PTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKL 265
Query: 175 LQ-VFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+ +F+ + FN + G +L+ + + ++M G + Y +M +
Sbjct: 266 LEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCR 325
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD-MKEKGILE 292
+G ++ L + TP H + IL + KSGR EA F D M + G
Sbjct: 326 VGKVDEAQVLLNKV------PTPNDVH-FTILINGYVKSGRLDEANAFLYDKMIKNGCRP 378
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
D + +LI + A ++ + G + L+ + ++ +E+ V+
Sbjct: 379 DVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVL 438
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
M +++ ++ K A+ + ++ +GC P T+ ++I C++
Sbjct: 439 NEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKV 498
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
A ++ +M G V Y++++ + + G I++A+ LV M +GC + Y
Sbjct: 499 DRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITY 558
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N L+ + + L+ EM R+ + P +S +I+ R + ++ +
Sbjct: 559 NGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIH 618
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
G D ++ K+ I E L +++EG + D Y++
Sbjct: 619 RGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNT 665
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 147/375 (39%), Gaps = 5/375 (1%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
++ P+ F ++G +K + E Y++ K RP+ T LI L +
Sbjct: 337 NKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIK-NGCRPDVFTFNTLIHGLCKKGL 395
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNS 191
S V + D P+ T + L+ + + + A +L G E+ ++ +N
Sbjct: 396 MGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNV 455
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
+ K + + +M G D + ++ K+ E AL+ +
Sbjct: 456 LLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALY---RDML 512
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
LD +T Y L + + G EALK DM +G D Y LI +F + +
Sbjct: 513 LDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATE 572
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A LF E K ++ C L+ G V L+++ M + L +++
Sbjct: 573 KALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLI 632
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
NG K A ++ +L ++G P +TY ++I +CR ++ A + + + F
Sbjct: 633 NGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFI 692
Query: 432 KCVVAYSSMVAMYGK 446
V + +V+ + K
Sbjct: 693 PNDVTWYILVSNFIK 707
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 131/320 (40%), Gaps = 28/320 (8%)
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
+KG +Y LI + E K+ ++L + +E+G+ + + ++ Y L
Sbjct: 95 QKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPG 154
Query: 347 KTLDVVESMK------------NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
+ ++ MK N L I +C V A V+ +++S+G
Sbjct: 155 QATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSV-----------AANVFYEMLSKG 203
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
IP T+ ++ A C + A + +M + G V Y +++ K R+ +A+
Sbjct: 204 VIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEAL 263
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L+ +M GC P+V +N ++ R + + KL M R TP+ ++Y +++
Sbjct: 264 KLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGL 323
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD-MKSEGTKLD 573
R + D N+ V I++ + K +++E L D M G + D
Sbjct: 324 CRVGKVDEAQVLLNKVPTPNDV----HFTILINGYVKSGRLDEANAFLYDKMIKNGCRPD 379
Query: 574 ERLYHSAMNALRDAGLQMQA 593
+++ ++ L GL A
Sbjct: 380 VFTFNTLIHGLCKKGLMGSA 399
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 90/215 (41%), Gaps = 5/215 (2%)
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC---VVAYSSMV 441
K+ Q+ +G + + I+ Y R L +A ++ ++M KG C +Y+ ++
Sbjct: 123 KLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDM--KGVYCCEPTFKSYNVVL 180
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ A + +M +KG P V+ + +M + L ++M +
Sbjct: 181 DILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCV 240
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ V Y T+I A ++ + +K E + G + D ++ +L++I E KL
Sbjct: 241 PNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKL 300
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ M G ++ Y MN L G +AQ L
Sbjct: 301 VDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVL 335
>gi|414878623|tpg|DAA55754.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
Length = 891
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 128/574 (22%), Positives = 227/574 (39%), Gaps = 68/574 (11%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLK-----LLIRYLVQSKKW 133
D F SF+ G L D +LAY+ L E E+ ++ ++I L + K
Sbjct: 167 DVHGFSSFIIG-LCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDGLCKEMKL 225
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
+ E + PD ++ S L+ S + + A ++ ++ G EI
Sbjct: 226 KEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEINCYIVAYL 285
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ KL M I+ ++K + G+ LD Y M+AY K+G+ + L E + L
Sbjct: 286 LQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLNEMMAGSL 345
Query: 253 DSTPFSTH----------------------------------MYKILCDSLGKSGRAFEA 278
P H Y IL ++G +
Sbjct: 346 --VPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNGLVMKV 403
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
M ++G+ + Y I F + AE LF EE+G+ + +V
Sbjct: 404 FDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYGSMVCG 463
Query: 339 YIEEGLVEKTLDVVESMKNAKL-KISDCISCA-IVNGFSKRRGYWAAVKVYEQLISQGCI 396
Y+ G + + ++ AK + D +SC+ ++NG + A V + ++ + +
Sbjct: 464 YLHSGWTDHAYMLF--LRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEKNVV 521
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P ++Y+ +I+AYC+ A F +M ++G V+ Y+ ++ Y K GR+++A L
Sbjct: 522 PDVISYSKLISAYCQTRDMHNARLWFHDMVERGLSD-VIVYTVLMNGYCKVGRLQEACEL 580
Query: 457 VAKMKAKGCEPNVWIYNSLMDMH----------GRAKN-----LRQVEK-LWKEMERRKV 500
+M G +P+V Y L+D H G AK LR K L M+ ++
Sbjct: 581 FVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLNSMKDMEI 640
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
PD YT +I +A + ++E G + D ++ + +I +
Sbjct: 641 EPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALINGYCSQGEIAKAED 700
Query: 561 LLQDMKSEGTKLD----ERLYHSAMNALRDAGLQ 590
L Q+M ++G K D R+ M+ R GL+
Sbjct: 701 LFQEMIAKGMKPDIWSMMRVIGVPMSGRRTPGLK 734
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 106/248 (42%), Gaps = 4/248 (1%)
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
V++ + ++ I +++G K A KV E G P +Y+ +I+++C
Sbjct: 196 VLQEISQERVPIEAMAYNMVIDGLCKEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHC 255
Query: 411 RIALYSKAEKVFIEMQQKGFD-KC-VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
++ KA +M G + C +VAY ++ K G + + + K + G +
Sbjct: 256 KMGNLEKAWYHVEDMVSHGIEINCYIVAY--LLQCLRKLGMVSEVIVHFQKFRDLGVHLD 313
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+YN MD + + N+ + KL EM + PDK+ YT +I+ Y E + + +
Sbjct: 314 GVLYNIAMDAYCKLGNMNEAVKLLNEMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFE 373
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E D I+ +S+ + ++ +L+ M +G + + Y A+ G
Sbjct: 374 EMLKANIKPDVVTYNILASGYSRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGG 433
Query: 589 LQMQAQWL 596
+A+ L
Sbjct: 434 NLSEAEVL 441
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 163/384 (42%), Gaps = 45/384 (11%)
Query: 75 TAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWD 134
+ VPD + ++G +T+ A+ + E K +P+ T +L ++
Sbjct: 344 SLVPDKIHYTCLINGYCLKGETEN-AWQVFEEMLK-ANIKPDVVTYNILASGYSRNGLVM 401
Query: 135 SIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG--EIALLAFNSA 192
+ + E + P++ T +A R A L + G I +L + S
Sbjct: 402 KVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVL-YGSM 460
Query: 193 MGGYNKLHMYYS--TILVYEKMKSAGIVLDSGCYCQIMEAY---YKIGDSEKVAALFLEC 247
+ GY LH ++ +++ ++ G ++D +++ K+G++ V + LE
Sbjct: 461 VCGY--LHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLE- 517
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
K+ D +S L + ++ A +F DM E+G L D +Y L+ + +
Sbjct: 518 KNVVPDVISYSK-----LISAYCQTRDMHNARLWFHDMVERG-LSDVIVYTVLMNGYCKV 571
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD----------------- 350
++ A ELF + G+ P+V VL+ +G +++TL
Sbjct: 572 GRLQEACELFVQMINLGI--KPDVVAYTVLL---DGHLKETLQQGWQGIAKERRTFFLRT 626
Query: 351 ----VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
++ SMK+ +++ +++G K A ++++++++G IP TY ++I
Sbjct: 627 KHKVLLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALI 686
Query: 407 NAYCRIALYSKAEKVFIEMQQKGF 430
N YC +KAE +F EM KG
Sbjct: 687 NGYCSQGEIAKAEDLFQEMIAKGM 710
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 121/282 (42%), Gaps = 7/282 (2%)
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALK---FFRDMKEKGILEDPSIYASLICSFASI 307
KLD FS+ + LCD GK A+ ++ +++ ++ + + Y +I
Sbjct: 165 KLDVHGFSSFIIG-LCDC-GKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDGLCKE 222
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
++K AE++ + G D L+ + + G +EK VE M + ++I +C
Sbjct: 223 MKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEI-NCYI 281
Query: 368 CAIVNGFSKRRGYWAAVKV-YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
A + ++ G + V V +++ G V Y ++AYC++ ++A K+ EM
Sbjct: 282 VAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLNEMM 341
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+ Y+ ++ Y G +A + +M +P+V YN L + R +
Sbjct: 342 AGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNGLVM 401
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+V + + M + + P+ ++Y I+ + R +N
Sbjct: 402 KVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFN 443
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/478 (20%), Positives = 206/478 (43%), Gaps = 54/478 (11%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD ++S LH M++ + LA YN+ KL + P ++T +L+ L ++ K D +
Sbjct: 164 PDVFTYNSILHVMVQK-EVFLLALAVYNQMLKL-NYNPNRATFVILLNGLCKNGKTDDAL 221
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
+ ++ + P+ + +++ +A++ + LL
Sbjct: 222 KMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNT-------------------- 261
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
MK +G DS +++ + K+G ++ AL + + +
Sbjct: 262 --------------MKVSGCCPDSITCNALLDGFCKLGQIDEAFALL---QLFEKEGYVL 304
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
Y L D L ++ R E ++ R M + GI D +Y LI F + V A +
Sbjct: 305 GIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNML 364
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV-VESMKNAKLKISDCISCAIVNGFSK 376
+ ++G+ D L+ + + GL++K + +E KN S C ++ G +
Sbjct: 365 NDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTS-CTYTILICGMCR 423
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ---------- 426
A +++ Q+ + GC P +T+ ++I+ C+ +A +F +M+
Sbjct: 424 NGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLR 483
Query: 427 -QKGFDKCV--VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
+G D+ + + +MV ++G I A L+ ++ G P++ YN L++ +AK
Sbjct: 484 LSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAK 543
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
N+ KL++E++ + +PD V+Y T+I ++R + + ++ NG A+
Sbjct: 544 NINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAV 601
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 187/455 (41%), Gaps = 71/455 (15%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNE--AKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
P+ F L+G+ K+ +T + A ++E K +P P +++ L Q+K+ D
Sbjct: 199 PNRATFVILLNGLCKNGKTDD-ALKMFDEMTQKGIP---PNTMIYTIILSGLCQAKRTDD 254
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMG 194
+ L K+ PD+ TC+ L+ + + A LLQ+F +G + + ++S +
Sbjct: 255 VHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLID 314
Query: 195 GYNKLHMY--------------------YSTILV---------------YEKMKSAGIVL 219
G + Y TIL+ M G+
Sbjct: 315 GLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSP 374
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEAL 279
D+ CY +++ + +G +K +L LE K D P S Y IL + ++G EA
Sbjct: 375 DTYCYNALIKGFCDVGLLDKARSLQLEIS--KNDCFPTSC-TYTILICGMCRNGLLDEAR 431
Query: 280 KFFRDMKEKGILEDPSI--YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
+ F M+ G PSI + +LI E++ A LF + E + ++P + L+L
Sbjct: 432 QIFNQMENLGC--SPSIMTFNALIDGLCKAGELEEARHLFYKME---IGKNPSLFLRL-- 484
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
+ D V M A L+ +V + A K+ QL G +P
Sbjct: 485 --------SQGADRV--MDTASLQ-------TMVERLCESGLILKAYKLLMQLADSGVVP 527
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
+TY +IN +C+ + A K+F E+Q KG V Y +++ + + R DA ++
Sbjct: 528 DIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVL 587
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
+M GC P+ +Y LM R L LW
Sbjct: 588 DQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLW 622
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%)
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
++ +E + + P L+ Y + G+ EK ++ MK+ K +I++
Sbjct: 117 KILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVM 176
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
++ + A+ VY Q++ P + T+ ++N C+ A K+F EM QKG
Sbjct: 177 VQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNT 236
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
+ Y+ +++ + R D L+ MK GC P+ N+L+D + + + L +
Sbjct: 237 MIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQL 296
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
E+ Y+++I RA+ +D ++ + G D + I++ F ++
Sbjct: 297 FEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGM 356
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQ 597
++ + +L DM G D Y++ + D GL +A+ LQ
Sbjct: 357 VDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQ 399
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 166/421 (39%), Gaps = 51/421 (12%)
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+I F+ + Y K M + + KMK G D Y I+ + + + A
Sbjct: 128 QIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSIL--HVMVQKEVFLLA 185
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
L + + KL+ P + + IL + L K+G+ +ALK F +M +KGI + IY ++
Sbjct: 186 LAVYNQMLKLNYNP-NRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIIL- 243
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE-KTLDVVESMKNAKLK 361
GL + K D V + N +K
Sbjct: 244 ---------------------------------------SGLCQAKRTDDVHRLLNT-MK 263
Query: 362 ISDC----ISC-AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+S C I+C A+++GF K A + + +G + G Y+S+I+ R Y
Sbjct: 264 VSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYD 323
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ ++ +M + G + VV Y+ ++ + + G + A+ ++ M +G P+ + YN+L+
Sbjct: 324 EVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALI 383
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
L + L E+ + P +YT +I R D + +N+ G
Sbjct: 384 KGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCS 443
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMK-SEGTKLDERLYHSAMNALRDAGLQMQAQW 595
++ K ++EE L M+ + L RL A + A LQ +
Sbjct: 444 PSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVER 503
Query: 596 L 596
L
Sbjct: 504 L 504
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 125/295 (42%), Gaps = 37/295 (12%)
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSK-RRGYWAAVKVYEQLISQGCIPGQVTYA 403
V ++ V M++A K++ +S IVN + +R + + + VT+
Sbjct: 41 VLTVMETVNPMEDALEKLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSFRSWVTHN 100
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
+I+ + + K+ E++ +S ++A Y K+G A+ KMK
Sbjct: 101 LVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDF 160
Query: 464 GCEPNVWIYNSLMD---------------------------------MHGRAKNLRQVE- 489
GC+P+V+ YNS++ ++G KN + +
Sbjct: 161 GCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDA 220
Query: 490 -KLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
K++ EM ++ + P+ + YT ++S +A+ D + N +++G D ++
Sbjct: 221 LKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDG 280
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ-WLQQNFEG 602
F KL QI+E LLQ + EG L + Y S ++ L A + Q W ++ F+
Sbjct: 281 FCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKA 335
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 11/248 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ T +LI ++K + L + ++ PD+ T L+ R + + A +
Sbjct: 527 PDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRV 586
Query: 175 LQVFITDGEIALLAFNSAMGGYN----KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
L + +G A + ++ KL + +S L Y ++S D ++ E
Sbjct: 587 LDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKY--LRSLPSQEDETL--KLAEE 642
Query: 231 YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI 290
+++ G+ EK LE + KL++ F Y I L ++ R+ EALK F +KE +
Sbjct: 643 HFEKGELEKAVRCLLE-MNFKLNN--FEIAPYTIWLIGLCQARRSEEALKIFLVLKECQM 699
Query: 291 LEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
+P LI +++A ++F EKG + P +C +L+ I + ++ LD
Sbjct: 700 DVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALD 759
Query: 351 VVESMKNA 358
++ M +A
Sbjct: 760 LLNRMNSA 767
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 121/539 (22%), Positives = 223/539 (41%), Gaps = 100/539 (18%)
Query: 137 VSLSEDFKIYN------VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAF 189
+ L E F +YN ++PD S L+ RA K + N+L + + G ++ ++ F
Sbjct: 289 LRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIF 348
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKS 249
+S M Y ++ I VY +M GI + Y ++ + G + +F +
Sbjct: 349 SSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILK 408
Query: 250 RKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITE 309
+ L+ + + Y L D KS + + M KG + D + + LI +
Sbjct: 409 QGLEPSVLT---YSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGM 465
Query: 310 VKLAEELFKEAEEKGM-------------------LRD--------------PEVCLKLV 336
+ A F +A ++G+ RD P+V V
Sbjct: 466 MDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTV 525
Query: 337 LM--YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR---------------G 379
L+ E+G +++ L + + I C +++GF K+R G
Sbjct: 526 LVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNG 585
Query: 380 YWAAVKVYEQLIS----QGCI----------------PGQVTYASIINAYCRIALYSKAE 419
+ + +Y LI+ +GC+ P VTY ++I YC + ++SKA
Sbjct: 586 IFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAI 645
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
K+F ++ + ++ ++ Y K GR+ DAM + + M +G EPN+ Y+ L+D +
Sbjct: 646 KLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGY 705
Query: 480 GRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE-----FRMNG 534
+ +N +L+++M +V+P+ VSY+ +I +C K E F+
Sbjct: 706 FKTENTESAFELYEKMLGDRVSPNIVSYSILIDG--------LCKKGLMEEASLAFQCAI 757
Query: 535 G--VIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
G ++ IA GI++ + K+ ++ E + L M G D+ L AL + G Q
Sbjct: 758 GRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLL----QKALAEYGFQ 812
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 152/390 (38%), Gaps = 72/390 (18%)
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G+ VA+ F + R S T + L + K R EA + M EKGI+ D
Sbjct: 252 MGNQIGVASDFFDMMVRSGPSPNLVT--FSTLINVYCKELRLDEAFSLYNLMIEKGIVPD 309
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
IY+ LI +++ LF A +G V+ + +
Sbjct: 310 LVIYSILINGLFRAGKLEEGNSLFSMALARG--------------------VKMDVVIFS 349
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
S+ +A +++ D A++VY +++ +G P VTY+ +IN CR
Sbjct: 350 SIMDAYVRVGD---------------LGKAIEVYTRMLKEGISPNVVTYSILINGLCRNG 394
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV---- 469
+A VF ++ ++G + V+ YSS++ + K+ +RD L M KG P+V
Sbjct: 395 RVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCS 454
Query: 470 -------------------------------WIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++N+L+D R K R K++ M
Sbjct: 455 MLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMY 514
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
KV PD V+YT ++ D + + + G D I ++ F K
Sbjct: 515 KVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATG 574
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+++ + M+S G D +Y+ +N G
Sbjct: 575 LQIFKLMQSNGIFPDICIYNVLINMFFREG 604
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/475 (20%), Positives = 215/475 (45%), Gaps = 51/475 (10%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A + Y+ +L + P+ L+ LV+S++ L + K+Y+ + D
Sbjct: 153 AVEIYDYVVELYDSVPDVIACNSLLSLLVKSRR------LGDARKVYDEMCDRGDSVDNY 206
Query: 160 ASCVRAR------KFKIANTLLQVFITDGEIALLAF-NSAMGGYNKLHMYYSTILVYEKM 212
++C+ + K ++ L++ G I + F N+ +GGY KL + LV++++
Sbjct: 207 STCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKEL 266
Query: 213 KSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL-------------------- 252
K G + + ++ + K GD L E K R L
Sbjct: 267 KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYK 326
Query: 253 -------------DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
D P Y IL + L K G+ A+ F + +KG++ + YA
Sbjct: 327 VDPAESIGWIIANDCKP-DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAP 385
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVESMKN 357
LI ++ E +A +L + E+G P++ +L++ + G ++ +++ + +
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGC--KPDIVTYGILIHGLVVSGHMDDAVNMKVKLID 443
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+ I +++G K + A ++ +++ + +P YA++I+ + R + +
Sbjct: 444 RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDE 503
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A KVF +KG VV +++M+ + ++G + +A+ + +M + P+ + Y++++D
Sbjct: 504 ARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+ + +++ K+++ ME+ K P+ V+YT++I+ + +F M + + E ++
Sbjct: 564 GYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQL 618
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 112/513 (21%), Positives = 219/513 (42%), Gaps = 32/513 (6%)
Query: 86 FLHGMLKDPQTQELAYDYYNEAKKLPEFRPE---KSTLKLLIRYLVQSKKWDSIVSL-SE 141
F+ ++D + +D+ + KK F S LKLL RY + ++ D + +L +E
Sbjct: 69 FVFDRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNE 128
Query: 142 DFKI-YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLH 200
+ K+ + L +H S ++ +I + +++++ D ++A NS + K
Sbjct: 129 NVKLTHEAL--SHVLHAYAESGSLSKAVEIYDYVVELY--DSVPDVIACNSLLSLLVKSR 184
Query: 201 MYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH 260
VY++M G +D+ C +++ G E V +E + K P +
Sbjct: 185 RLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVE-VGRKLIEGRWGK-GCIP-NIV 241
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
Y + K G A F+++K KG + + ++I F + ++ L E
Sbjct: 242 FYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEV 301
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEK-----TLDVVESMKNAKLKISDC-----ISCAI 370
+E+G L++ + ++ + K +D ES+ + +DC +
Sbjct: 302 KERG--------LRVSVWFLNNIIDAKYRHGYKVDPAESI--GWIIANDCKPDVATYNIL 351
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+N K AV ++ +G IP ++YA +I AYC+ Y A K+ ++M ++G
Sbjct: 352 INRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC 411
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
+V Y ++ +G + DA+ + K+ +G P+ IYN LM + +
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
L+ EM R + PD Y T+I + R+ +FD K ++ G +D M+ F
Sbjct: 472 LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ ++E + + M E D+ Y + ++
Sbjct: 532 RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 161/392 (41%), Gaps = 45/392 (11%)
Query: 86 FLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKI 145
+ HG DP + + + N+ K P+ +T +LI L + K + V ++
Sbjct: 321 YRHGYKVDP-AESIGWIIANDCK------PDVATYNILINRLCKEGKKEVAVGFLDEASK 373
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYST 205
++P+ + + L+ + +++++ IA+ LL
Sbjct: 374 KGLIPNNLSYAPLIQAYCKSKEYDIASKLLL----------------------------- 404
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+M G D Y ++ G + + ++ R + +Y +L
Sbjct: 405 -----QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSP---DAAIYNML 456
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
L K+GR A F +M ++ IL D +YA+LI F + A ++F + EKG+
Sbjct: 457 MSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
D ++ + G++++ L + M L I++G+ K++ A+K
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIK 576
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++ + C P VTY S+IN +C + AE+ F EMQ + VV Y++++
Sbjct: 577 IFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLA 636
Query: 446 K-TGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
K + + A++ M C PN +N L+
Sbjct: 637 KESSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 127/305 (41%), Gaps = 37/305 (12%)
Query: 329 PEV--CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
P+V C L+ + ++ + V + M + + + +C +V G K+
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
E +GCIP V Y +II YC++ A VF E++ KGF + + +M+ + K
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM---HGRAKNLRQ---------------- 487
G + L++++K +G +VW N+++D HG + +
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 488 ----VEKLWKE------------MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+ +L KE ++ + P+ +SY +I AY +++E+D+ K +
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQM 591
G D GI++ +++ V + + G D +Y+ M+ L G +
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467
Query: 592 QAQWL 596
A+ L
Sbjct: 468 PAKLL 472
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 132/300 (44%), Gaps = 4/300 (1%)
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
G++ ++ Y +++AY K + + + L L+ R + Y IL L SG
Sbjct: 375 GLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVT---YGILIHGLVVSGHM 431
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
+A+ + ++G+ D +IY L+ A+ LF E ++ +L D V L
Sbjct: 432 DDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATL 491
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ +I G ++ V +K+ A++ GF + A+ ++ +
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
+P + TY++II+ Y + + A K+F M++ VV Y+S++ + G + A
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEE 611
Query: 456 LVAKMKAKGCEPNVWIYNSLM-DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
+M+ + PNV Y +L+ + + L + W+ M K P++V++ ++ +
Sbjct: 612 TFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGF 671
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/441 (20%), Positives = 179/441 (40%), Gaps = 37/441 (8%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD ++ ++ + K+ + +E+A + +EA K P + LI+ +SK++D
Sbjct: 343 PDVATYNILINRLCKEGK-KEVAVGFLDEASK-KGLIPNNLSYAPLIQAYCKSKEYDIAS 400
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA-FNSAMGGY 196
L PD T L+ V + A + I G A +N M G
Sbjct: 401 KLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD---SEKVAALFLECKSRKLD 253
K + L++ +M I+ D+ Y +++ + + GD + KV +L +E K K+D
Sbjct: 461 CKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVE-KGVKVD 519
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+ M K C +SG EAL M E+ ++ D Y+++I + ++ A
Sbjct: 520 VVHHNA-MIKGFC----RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATA 574
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
++F+ E+ + L+ + +G + + + M+ L + ++
Sbjct: 575 IKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS 634
Query: 374 FSKRRGYWA-AVKVYEQLISQGCIPGQVTYASIINAYCR-----------------IALY 415
+K AV +E +++ C+P +VT+ ++ + + +L+
Sbjct: 635 LAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLF 694
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
S + F M+ G+ AY+S + G ++ A KM KG P+ + ++
Sbjct: 695 S---EFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAI 751
Query: 476 MDMHGRAKNLRQVEKLWKEME 496
+ N +Q W+ M+
Sbjct: 752 LHGFCVVGNSKQ----WRNMD 768
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 115/311 (36%), Gaps = 35/311 (11%)
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A +++ E ++G D LV EG VE ++E + I+
Sbjct: 189 ARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIG 248
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF-- 430
G+ K A V+++L +G +P T+ ++IN +C+ + ++++ E++++G
Sbjct: 249 GYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRV 308
Query: 431 ------------------------------DKC---VVAYSSMVAMYGKTGRIRDAMWLV 457
+ C V Y+ ++ K G+ A+ +
Sbjct: 309 SVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFL 368
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+ KG PN Y L+ + ++K KL +M R PD V+Y +I +
Sbjct: 369 DEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVS 428
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
D V + G D AI +++ K + L +M D +Y
Sbjct: 429 GHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVY 488
Query: 578 HSAMNALRDAG 588
+ ++ +G
Sbjct: 489 ATLIDGFIRSG 499
>gi|255661156|gb|ACU25747.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 426
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 159/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ ++ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YN +M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNXMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D A++ L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDIAIHILAGAGRIEEATWV 342
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 150/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K G D Y ++I F +
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVN 372
A L E G+ + L+ MY+E + L + M+ K + D +C I+
Sbjct: 98 ARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKC-LLDLTTCNIMI 156
Query: 373 GFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ G A K++ + G P V+Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y+ M+ +YGKT A L+ +M+ +G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNXMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 162/353 (45%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG+ ++ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFA 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNXMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ +A + + GRI +A W+ + G ++ ++ ++ + + K
Sbjct: 314 ELKRPDNIPRDIA----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + EFD Y E + G V
Sbjct: 370 KYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P++ YN+++++ G+AK R+ L EM VTP+ SY+T+++ Y
Sbjct: 67 FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R ++D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 142/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNXMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDIAIHILAGAGRIEEATWV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A ++NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANDVYMEMQEVG 420
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q G E + +++ + + K+ ++++K++S+G+ +D Y ++
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIV 297
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P I L +GR EA FR + G
Sbjct: 298 AYERAGLVAHAKRLLHELK--RPDNIP-----RDIAIHILAGAGRIEEATWVFRQAIDAG 350
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I F+ + E+F + G D V ++ Y + +K
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAN 410
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 411 DVYMEMQEVGCVFSD 425
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 202/481 (41%), Gaps = 39/481 (8%)
Query: 120 LKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI 179
L +IR L +K +++ K P A + ++ + +++ + L
Sbjct: 162 LSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMS 221
Query: 180 TDGEIA--LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDS 237
+G + +++ + + KL S I + +MK G+ + Y I+ ++K+ +
Sbjct: 222 NEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNV 281
Query: 238 EKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
+LF E + F+ Y L LGK+GR EA F+ +M+ + D +
Sbjct: 282 HGALSLFEEMRYMYCRPDVFT---YTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVM 338
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKN 357
++I + +LF EE G+ C+ V+ Y +++++
Sbjct: 339 NNMINFLGKAGRLDDGLKLF---EEMGVSH----CIPNVVTYN---------TIIKALFE 382
Query: 358 AKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSK 417
+K ++S+ S W +E++ G P TY+ +I+ +C+ K
Sbjct: 383 SKSRVSEVFS-------------W-----FERMKGSGISPSPFTYSILIDGFCKTNRIEK 424
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
A + EM +KGF C AY S++ GK R A L ++K + +Y ++
Sbjct: 425 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIK 484
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
G+A L L+ EM + TP+ +Y ++S RA D + + + +G +
Sbjct: 485 HLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLP 544
Query: 538 DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQ 597
D I++ +K +++L +MK+ K D Y++ ++AL AG+ +A L
Sbjct: 545 DINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELM 604
Query: 598 Q 598
+
Sbjct: 605 K 605
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 153/375 (40%), Gaps = 13/375 (3%)
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
G EKV L+ E S + P T Y L + K GR A++ +MKE G+
Sbjct: 208 GQYEKVHELYNEM-SNEGHCHP-DTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTA 265
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
IY +I F + V A LF+E D +L+ + G +++
Sbjct: 266 KIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHE 325
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
M+ K + ++N K +K++E++ CIP VTY +II A L
Sbjct: 326 MQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKA-----L 380
Query: 415 YSKAEKV------FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+ +V F M+ G YS ++ + KT RI AM L+ +M KG P
Sbjct: 381 FESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPC 440
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
Y SL+D G+AK +L++E++ + Y +I +A D + ++
Sbjct: 441 PAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFD 500
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E G + ++ ++ ++E + ++ M+ G D Y+ +N L G
Sbjct: 501 EMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTG 560
Query: 589 LQMQAQWLQQNFEGT 603
+A + N + +
Sbjct: 561 GPHRAMEMLTNMKNS 575
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 83/216 (38%), Gaps = 36/216 (16%)
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM-- 443
+ E + S C+ + + +I + KA +F +++ + AY+SM+ M
Sbjct: 146 IQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLI 205
Query: 444 ----------------------------------YGKTGRIRDAMWLVAKMKAKGCEPNV 469
+ K GR A+ L+ +MK G +P
Sbjct: 206 HEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTA 265
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
IY ++ + + N+ L++EM PD +YT +I +A D FY+E
Sbjct: 266 KIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHE 325
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+ D + M+ K ++++ +KL ++M
Sbjct: 326 MQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEM 361
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 189/431 (43%), Gaps = 60/431 (13%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
E+MK+ GI L Y I+ + KI D++ LF E K++ D + +Y + +
Sbjct: 328 EEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGD---LNGIIYSNIIHAH 384
Query: 270 GKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDP 329
+SG A + R+M+E GI Y S++ + I + K +F+ R
Sbjct: 385 CQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFE--------RLK 436
Query: 330 EVCLK--------LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E C L+ +YI+ G V K + + + M++ +K ++ +++GF +
Sbjct: 437 ECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFA 496
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A ++E+++ G P + Y +I A+C++ +A ++ +MQ++ A+ ++
Sbjct: 497 NAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPII 556
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK---LWKEMERR 498
+ G ++ A+ ++ M+ GC P V YN+L +HG K QVE+ + +M
Sbjct: 557 EGFAVAGDMKRALNILDLMRRSGCAPTVMTYNAL--IHGLIKK-NQVERAVSVLNKMSIA 613
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG------------------GVIDRA 540
+TP++ +YT ++ Y + +++ + + G G + A
Sbjct: 614 GITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSA 673
Query: 541 IA-----------------GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+A I++ +++ + E L++ MK +G + Y S +NA
Sbjct: 674 LAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINA 733
Query: 584 LRDAGLQMQAQ 594
AG +AQ
Sbjct: 734 CCKAGDMQRAQ 744
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 185/415 (44%), Gaps = 4/415 (0%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
A L++ DG + + A++S M GY + ++V+E++K Y ++
Sbjct: 393 AEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLIN 452
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
Y KIG K A+ E +S + + Y +L A F +M + G
Sbjct: 453 LYIKIGKVTKAIAISKEMESYGIK---HNNKTYSMLISGFIHLHDFANAFSIFEEMLKSG 509
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
+ D +IY LI +F + + A + ++ +++ M ++ + G +++ L
Sbjct: 510 LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRAL 569
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
++++ M+ + + A+++G K+ AV V ++ G P + TY I+ Y
Sbjct: 570 NILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGY 629
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
KA + F ++++ G V Y +++ K+GR++ A+ + +M + N
Sbjct: 630 AANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNT 689
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
++YN L+D R ++ + L K+M+ V P+ +YT+ I+A +A + K E
Sbjct: 690 FVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEE 749
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G + ++ ++K S + +K ++MK G K DE YH + +L
Sbjct: 750 MADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSL 804
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 157/365 (43%), Gaps = 4/365 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F P + LI ++ K +++S++ + Y + + T S L++ + F A
Sbjct: 440 FTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAF 499
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
++ + + G + +N + + K+ I + EKM+ + + + I+E +
Sbjct: 500 SIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGF 559
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
GD ++ AL + R+ P + Y L L K + A+ M GI
Sbjct: 560 AVAGDMKR--ALNILDLMRRSGCAP-TVMTYNALIHGLIKKNQVERAVSVLNKMSIAGIT 616
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y ++ +A+ ++ A E F + +E G+ D + L+ + G ++ L V
Sbjct: 617 PNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAV 676
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
M K+ + + +++G+++R W A + +Q+ G P TY S INA C+
Sbjct: 677 TREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCK 736
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+A+KV EM G + Y++++ + K A+ +MK G +P+
Sbjct: 737 AGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAA 796
Query: 472 YNSLM 476
Y+ L+
Sbjct: 797 YHCLV 801
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 136/294 (46%), Gaps = 4/294 (1%)
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
+ +I +A + A F+ +G+ + V LV Y + L VE MK
Sbjct: 272 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMK 331
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
++++ I+ GF+K +A ++++ ++ + Y++II+A+C+
Sbjct: 332 AEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMD 391
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC--EPNVWIYNS 474
+AE++ EM++ G D + AY SM M+G T + L+ + K C P++ Y
Sbjct: 392 RAEELVREMEEDGIDAPIDAYHSM--MHGYTIIQDEKKCLIVFERLKECCFTPSIISYGC 449
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L++++ + + + + KEME + + +Y+ +IS + +F + E +G
Sbjct: 450 LINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSG 509
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
DRAI +++ F K+ ++ +++L+ M+ E + R + + AG
Sbjct: 510 LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAG 563
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 4/160 (2%)
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
S+ + A V +E++ P + + +I Y + A F M+ +G +
Sbjct: 249 SRPEDWQAVVSAFERIPK----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNA 304
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
++S+V Y +R + V +MKA+G E + Y+ ++ + + + + L+KE
Sbjct: 305 FVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKE 364
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+ + + + Y+ +I A+ ++ D + E +G
Sbjct: 365 AKAKLGDLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDG 404
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/471 (21%), Positives = 192/471 (40%), Gaps = 41/471 (8%)
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA---LLAFNSAMGGYNKLHMYYSTIL 207
DA T + ++ R + A L +V + G I ++ +NS + GY K+ +
Sbjct: 136 DAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFA 195
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V E+MK+ G+ +D Y ++ + G+ + + + K D + Y +
Sbjct: 196 VAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMV---DTMKRDGVEPNVVTYTMFIV 252
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
+ +A + +M KG+L D ++L+ A LF+E E+ G
Sbjct: 253 EYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAP 312
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ L+ + ++L ++ + + + + + A+++ K A ++
Sbjct: 313 NHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMF 372
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+S P VTY +I+A C+ AE+V EM++K VV +SS++ K
Sbjct: 373 RHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKR 432
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMD------------------------------ 477
G + A + +MK +G +PNV Y +++D
Sbjct: 433 GWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIV 492
Query: 478 ---MHGRAKN--LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
++G KN + + E L++EM R V D V+YTT+I + K E
Sbjct: 493 DSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTE 552
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ D + + + L + +E L++M+S G K D+ Y++ + A
Sbjct: 553 KNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAA 603
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 197/465 (42%), Gaps = 6/465 (1%)
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
++ +++E K V D + LVA RA + A ++ DG E ++ +
Sbjct: 191 ETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMF 250
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ Y + + +YE+M G++ D ++ K G + ALF E + K+
Sbjct: 251 IVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREME--KI 308
Query: 253 DSTPFSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
+ P H+ Y +L D+L K+ R E+L ++ +G++ D +Y +L+ ++
Sbjct: 309 GAAP--NHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKID 366
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A+++F+ A + L+ + G V+ V+ M+ + + +I+
Sbjct: 367 EAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSII 426
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
NG KR A ++ +G P VTY ++I+ + A V+ EM +G +
Sbjct: 427 NGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVE 486
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
S+V K G+I A L +M +G + Y +L+D + NL K+
Sbjct: 487 VNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKV 546
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+E+ + + PD V Y I+ + F E + G D+ M+ S+
Sbjct: 547 GQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSR 606
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + +KLL MK K + Y + + L +AG +A++L
Sbjct: 607 EGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYL 651
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 116/538 (21%), Positives = 222/538 (41%), Gaps = 43/538 (7%)
Query: 79 DAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVS 138
D ++S + G+ + + + A D + K+ P T + I + D S
Sbjct: 208 DVVGYNSLVAGLCRAGEV-DAARDMVDTMKR-DGVEPNVVTYTMFIVEYCRRNAVDDAFS 265
Query: 139 LSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYN 197
L E+ VLPD T S LV + +F A L + G + + +
Sbjct: 266 LYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLA 325
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE----------- 246
K ++ + ++ S G+V+D Y +M+ K G ++ +F
Sbjct: 326 KAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGV 385
Query: 247 ---------CKSRKLD------------STPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
CK+ +D S + + + + L K G +A + R+M
Sbjct: 386 TYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREM 445
Query: 286 KEKGILEDPSI--YASLI-CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEE 342
KE+GI DP++ Y ++I SF + + + A +++ E +G+ + + LV +
Sbjct: 446 KERGI--DPNVVTYGTVIDGSFKCLGQ-EAALDVYHEMLCEGVEVNKFIVDSLVNGLKKN 502
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
G +EK + M + + +++G K AA KV ++L + +P V Y
Sbjct: 503 GKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVY 562
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
IN C + +AE EMQ G V Y++M+A + G+ A+ L+ MK
Sbjct: 563 NVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKR 622
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
+PN+ Y++L+ A + + + L EM +P +++ V+ A ++ R D+
Sbjct: 623 SSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDL 682
Query: 523 CVKFYNEFRMNGGV-IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
++ + E+ MN G+ D + +V V + + +L++M G D +++
Sbjct: 683 ILEIH-EWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNA 739
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 184/433 (42%), Gaps = 48/433 (11%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGD-----------SEK-------VAALFLEC-- 247
++ +M G++LD Y +++ +K G+ +EK V +F+ C
Sbjct: 511 LFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLC 570
Query: 248 ---KSRKLDSTPFSTHM-----------YKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
KS++ +S F M Y + + + G+ +ALK MK I +
Sbjct: 571 MLGKSKEAES--FLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPN 628
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL-VEKTLDVV 352
Y++LI V+ A+ L E G + + VL +G + L++
Sbjct: 629 LITYSTLIVGLFEAGAVEKAKYLLNEMSSSG-FSPTSLTHRRVLQACSQGRRSDLILEIH 687
Query: 353 ESMKNAKLKISDCISCAIV-----NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
E M NA L + +V NG +++ A+ V E++ +G P +T+ ++I
Sbjct: 688 EWMMNAGLCADITVYNTLVRVLCYNGMTRK-----AMVVLEEMSGRGIAPDTITFNALIL 742
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+ + A + +M G V +++++ GRI ++ ++ +MK +G EP
Sbjct: 743 GHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEP 802
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
+ Y+ L+ +G+ N + +L+ EM + P +Y +IS +++ + +
Sbjct: 803 SNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELF 862
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA 587
NE + G + I+V +SKL E+ K L+DMK +G + S A
Sbjct: 863 NEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKP 922
Query: 588 GLQMQAQWLQQNF 600
G+ +A+ L +N
Sbjct: 923 GMSWEARRLLKNL 935
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/418 (19%), Positives = 172/418 (41%), Gaps = 47/418 (11%)
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
+D+ Y +M + + G A L CK PF + L + GR A
Sbjct: 101 VDTVSYNVVMSGFSEQGGLAPEALLAEMCKR----GVPFDAVTVNTVLVGLCRDGRVDRA 156
Query: 279 LKFFRDMKEKGILEDPSI--YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
M G + + + SL+ + + +++ A + + + +G+ D LV
Sbjct: 157 AALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLV 216
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
G V+ D+V++MK ++ + + + +R A +YE+++ +G +
Sbjct: 217 AGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVL 276
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P VT ++++ C+ +S+A +F EM++ G V Y ++ K R +++ L
Sbjct: 277 PDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSL 336
Query: 457 VAKMKAKGC-----------------------------------EPNVWIYNSLMDMHGR 481
+ ++ ++G PN Y L+D +
Sbjct: 337 LGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCK 396
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
A N+ E++ EME + ++P+ V+++++I+ + + E + G ID +
Sbjct: 397 AGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERG--IDPNV 454
Query: 542 ---AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ G F L Q E + + +M EG ++++ + S +N L+ G +A+ L
Sbjct: 455 VTYGTVIDGSFKCLGQ-EAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEAL 511
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 143/340 (42%), Gaps = 12/340 (3%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D + HMY +L L K GR +A +M +G++ Y ++I + +K
Sbjct: 278 DGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKD 337
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK---ISDCIS-C 368
A + E+ G +P+ L+Y GL LD E + N + I+
Sbjct: 338 ALGIKALMEQNGC--NPDDWTYNSLIY---GLCGGKLDEAEELLNGAIARGFTPTVITFT 392
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++NG+ K A++V +IS C Y +IN + +A++ EM
Sbjct: 393 NLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFAN 452
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G VV Y+S++ Y K G + A+ + M+ +GC PN W Y SL+ + K L +
Sbjct: 453 GLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKA 512
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
L +M+ +TP ++YTT+I + EFD + + NG D ++
Sbjct: 513 MALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDA 572
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
K + EE L +G L + Y S ++ AG
Sbjct: 573 LCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAG 609
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 146/327 (44%), Gaps = 3/327 (0%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L + L K R EA + +M G+ + IY S+I + + V A E+FK E
Sbjct: 426 YGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLME 485
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+G + L+ I++ + K + ++ M+ + ++ G K+ +
Sbjct: 486 HEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFD 545
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A +++E + G P + Y + +A C+ +AE+ + + +KG V Y+S+V
Sbjct: 546 NAFRLFEMMEKNGLTPDEQAYNVLTDALCK---SGRAEEAYSFLVRKGVVLTKVTYTSLV 602
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+ K G A L+ KM +GC+ +++ Y+ L+ + K L + + +M V
Sbjct: 603 DGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVK 662
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
+ V+YT +IS + + D +NE +G + + + K+ QIEE L
Sbjct: 663 CNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHL 722
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAG 588
+ +M+ +G D YH +N G
Sbjct: 723 IGEMERDGVTPDVVTYHIFINGCGHMG 749
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 140/311 (45%), Gaps = 3/311 (0%)
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
K + + ++G+L D Y ++I ++ + +A F E GM D C L+L Y
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
+ K ++ M + ++ ++ G + R A+ + ++ GC
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNL 284
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
Y +I C+ A + EM +G V Y++M+ Y K+GR++DA+ + A
Sbjct: 285 HMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344
Query: 460 MKAKGCEPNVWIYNSLMDMHGR-AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
M+ GC P+ W YNSL ++G L + E+L R TP +++T +I+ Y +A
Sbjct: 345 MEQNGCNPDDWTYNSL--IYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAE 402
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
D ++ + + +D G+++ V K +++E + L +M + G + +Y
Sbjct: 403 RIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYT 462
Query: 579 SAMNALRDAGL 589
S ++ G+
Sbjct: 463 SIIDGYCKVGM 473
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 117/563 (20%), Positives = 220/563 (39%), Gaps = 61/563 (10%)
Query: 78 PDAKKFDSFLHGML--KDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDS 135
PD ++S ++G+ K + +EL F P T LI ++++ D
Sbjct: 352 PDDWTYNSLIYGLCGGKLDEAEELLNGAIARG-----FTPTVITFTNLINGYCKAERIDD 406
Query: 136 IVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA-NTLLQVFITDGEIALLAFNSAMG 194
+ + + N D L+ ++ + K A TL ++F ++ + S +
Sbjct: 407 ALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIID 466
Query: 195 GYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL--------- 245
GY K+ M + + V++ M+ G ++ Y ++ + K AL
Sbjct: 467 GYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITP 526
Query: 246 -----------ECKSRKLDS-------------TPFSTHMYKILCDSLGKSGRAFEALKF 281
+CK + D+ TP Y +L D+L KSGRA EA F
Sbjct: 527 GVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTP-DEQAYNVLTDALCKSGRAEEAYSF 585
Query: 282 FRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIE 341
+ KG++ Y SL+ F+ A L ++ +G D L+ +
Sbjct: 586 ---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCK 642
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
+ + + L +++ M + +K + I++ K + A ++ ++IS G P T
Sbjct: 643 QKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATT 702
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y I++YC+I +AE + EM++ G VV Y + G G + A + +M
Sbjct: 703 YTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMV 762
Query: 462 AKGCEPNVWIY---------NSLMDMH----GRAKNLRQVEKLWKEMER---RKVTPDKV 505
CEPN W Y SL++ H N ++ +W+ +ER + P V
Sbjct: 763 DASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVV 822
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y+++I+ + +A + + + I +++ + + V + DM
Sbjct: 823 TYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDM 882
Query: 566 KSEGTKLDERLYHSAMNALRDAG 588
G + YH + L D G
Sbjct: 883 IEFGFQPQLESYHYLIVGLCDEG 905
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 181/399 (45%), Gaps = 9/399 (2%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGI---VLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++S M GY + ++V+E++K G ++ GC ++ Y KIG K ++
Sbjct: 406 YHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGC---LLNLYVKIGKVAKALSISK 462
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E +S + + Y +L + A F +M G+ D +IY LI +F
Sbjct: 463 EMESCGIK---HNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFC 519
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ + A + ++ +++ M ++ Y G ++ LD ++ M+ + +
Sbjct: 520 KMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVM 579
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
A+++G ++ AV V +++ G P + TY I+ Y KA + F ++
Sbjct: 580 TYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKI 639
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
++ G V Y +++ K+GR++ A+ + +M + N +IYN L+D R ++
Sbjct: 640 KESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDV 699
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ E L K+M+ V P+ +YT+ I+A +A + K E G + +
Sbjct: 700 WEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTL 759
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ ++++S + +K ++MK G K DE YH + +L
Sbjct: 760 IKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSL 798
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 194/451 (43%), Gaps = 46/451 (10%)
Query: 183 EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
E F S + Y + E+MKS G+ L Y ++ + KI DS+
Sbjct: 295 EPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADN 354
Query: 243 LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLIC 302
LF E K+ KL S + +Y + + +SG A + +M+E GI +Y S++
Sbjct: 355 LFKEAKT-KLSS--LNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMH 411
Query: 303 SFASITEVKLAEELFKEAEEKGMLRDPEV----CLKLVLMYIEEGLVEKTLDVVESMKNA 358
+ I +F+ +E G P + CL + +Y++ G V K L + + M++
Sbjct: 412 GYTIIQNENKCLVVFERLKECGF--KPSIISYGCL--LNLYVKIGKVAKALSISKEMESC 467
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+K ++ ++NGF + A ++E+++ G P + Y +I A+C++ +A
Sbjct: 468 GIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRA 527
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+ +MQ++ A+ ++ Y G ++ A+ + M+ GC P V YN+L+
Sbjct: 528 ICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHG 587
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG---- 534
R +++ + +M +TP++ +YT ++ Y + + +++ + + +G
Sbjct: 588 LVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLD 647
Query: 535 --------------GVIDRAIA-----------------GIMVGVFSKLSQIEELVKLLQ 563
G + A+A I++ +++ + E L++
Sbjct: 648 VYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMK 707
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
MK +G + Y S +NA AG +A+
Sbjct: 708 QMKEDGVPPNIHTYTSYINACCKAGDMQRAE 738
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 135/292 (46%)
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
+ +I +A + A F+ +G+ + V LV Y + L VE MK
Sbjct: 266 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 325
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ L+++ +++GF+K +A ++++ ++ + Y++II+A+C+
Sbjct: 326 SEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNME 385
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+AE++ EM++ G D + Y SM+ Y + + ++K G +P++ Y L+
Sbjct: 386 RAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLL 445
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+++ + + + + KEME + + +Y+ +I+ + +F + E +G
Sbjct: 446 NLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQ 505
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
DRAI +++ F K+ ++ + +L+ M+ E + R + + AG
Sbjct: 506 PDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAG 557
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/455 (20%), Positives = 182/455 (40%), Gaps = 29/455 (6%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
F+P + L+ V+ K +S+S++ + + + T S L+ + F A
Sbjct: 434 FKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAF 493
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
+ + + G + +N + + K+ I + EKM+ + + + I+E Y
Sbjct: 494 AIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGY 553
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
GD + +AL R+ P + Y L L + + A+ M GI
Sbjct: 554 AVAGDMK--SALDTLDLMRRSGCVP-TVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGIT 610
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
+ Y ++ +A+ ++ A E F + +E G+ D + L+ + G ++ L V
Sbjct: 611 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 670
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
M K+ + I +++G+++R W A + +Q+ G P TY S INA C+
Sbjct: 671 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 730
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+AEKV EM G V Y++++ + + A+ +MK G +P+
Sbjct: 731 AGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEAS 790
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV------- 524
Y+ L+ + R + +YT +IS E D+ V
Sbjct: 791 YHCLV----------------TSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVH 834
Query: 525 --KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
++ ++ GG + A+ I ++ L + E
Sbjct: 835 WSRWLHKIERTGGALTEALQRIFPPDWNSLEFLGE 869
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/245 (17%), Positives = 97/245 (39%), Gaps = 39/245 (15%)
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
S+ + A V +E++ P + + +I Y + A F M+ +G +
Sbjct: 243 SRPDNWQAVVSAFERIPK----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNA 298
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCE---------------------------- 466
++S+V Y +R A+ V +MK++G E
Sbjct: 299 FVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKE 358
Query: 467 -------PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
N IY++++ H ++ N+ + E+L EME + Y +++ Y +
Sbjct: 359 AKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQN 418
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
+ C+ + + G G ++ ++ K+ ++ + + + ++M+S G K + + Y
Sbjct: 419 ENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSM 478
Query: 580 AMNAL 584
+N
Sbjct: 479 LINGF 483
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 182/457 (39%), Gaps = 45/457 (9%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
+P T L+ L + I++L E+ K + P+ +T + + + RAR+ A
Sbjct: 232 KPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWG 291
Query: 174 LLQVFITDG----EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
+ + +G I A+ KL +Y KM+++ D Y +M+
Sbjct: 292 IFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKE---LYVKMRASSHSPDRVTYITLMD 348
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
+ K+GD E V + E ++D Y IL ++L KSG A M KG
Sbjct: 349 KFGKVGDLETVKRFWNE---MEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKG 405
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
I + Y ++IC + A EL + E G+ + + Y + G K +
Sbjct: 406 IFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAI 465
Query: 350 DVVESMK-----------NAKL-------KIS-------DCISCAI----------VNGF 374
D E+MK NA L +IS D C + + +
Sbjct: 466 DTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCY 525
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
SK A ++ ++IS+GC P + S+IN + A K+F ++ V
Sbjct: 526 SKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTV 585
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V Y+ ++ GK G+I A+ L M GC PN +NSL+D + + K++
Sbjct: 586 VTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCR 645
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
M PD ++Y T+I R D F+++ +
Sbjct: 646 MTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK 682
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 129/273 (47%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L D L S +AL+ F DMK G + Y L+ + + +L+ E
Sbjct: 799 YNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMR 858
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
+G + ++ ++ + K LD+ + + + C +++G K
Sbjct: 859 SRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSE 918
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+K++E+++ GC P V Y +IN + + A ++F +M ++G + +Y+ +V
Sbjct: 919 QAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILV 978
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
TGRI +A+ ++K G +P+ YN +++ G+++ L + L+ EM+ R ++
Sbjct: 979 ECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGIS 1038
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
PD +Y +I A + D+ VK Y E ++ G
Sbjct: 1039 PDLYTYNALILHLGIAGKVDVAVKMYEELQLVG 1071
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/517 (19%), Positives = 215/517 (41%), Gaps = 63/517 (12%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ ++G++++ + + A+ ++++ KK P+ TL LI +V+ + + +
Sbjct: 653 PDVLTYNTIIYGLIREGRI-DYAFWFFHQMKKF--LSPDYVTLCTLIPGVVRHGRVEDAI 709
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-------LLAFN 190
+ +F H +C++ + L++ +T+ EI +L N
Sbjct: 710 KVVMEF--------VH------QACLQTNS-QFWGELMECILTEAEIEEAISFAEILVCN 754
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSA--------------GIVLDSGCYCQIMEAYYKIGD 236
S H+ I V K K A GI Y +M+
Sbjct: 755 SVC---QDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNF 811
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+EK LF + KS F+ Y +L D+ GKS R + + +M+ +G +
Sbjct: 812 TEKALELFEDMKSAGTHPNNFT---YNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAIT 868
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
+ +I + + A +L+ E P L+ ++ G E+ + + E M
Sbjct: 869 HNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEML 928
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ + I ++NGF K A +++++++ +G P +Y ++ C
Sbjct: 929 DYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRID 988
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+A + F E++ G D V+Y+ ++ GK+ R+ +A+ L ++MK +G P+++ YN+L+
Sbjct: 989 EAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALI 1048
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG-- 534
G A + K+++E++ + P +Y +I ++ + D + + + G
Sbjct: 1049 LHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCS 1108
Query: 535 ----------------GVIDRAIAGIMVGVFSKLSQI 555
G++ + +G+F + I
Sbjct: 1109 PNTETFAQLPNKYPRAGLVHNPFGAVFIGLFFIFTSI 1145
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 114/245 (46%)
Query: 344 LVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYA 403
EK L++ E MK+A ++ +++ K + +Y ++ S+GC P +T+
Sbjct: 811 FTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHN 870
Query: 404 SIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAK 463
II+A + +KA ++ E+ F Y ++ K GR AM + +M
Sbjct: 871 IIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDY 930
Query: 464 GCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMC 523
GC PN IYN L++ G++ + +L+K+M + + PD SYT ++ D
Sbjct: 931 GCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEA 990
Query: 524 VKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
V+++ E ++ G D ++ K +++E + L +MK+ G D Y++ +
Sbjct: 991 VQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILH 1050
Query: 584 LRDAG 588
L AG
Sbjct: 1051 LGIAG 1055
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+KVY+++IS+G P TY++++ A R K + EM+ G + Y+ +
Sbjct: 219 ALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIR 278
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
G+ RI DA + +M +GC P+V Y L+D A L + ++L+ +M +P
Sbjct: 279 ALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSP 338
Query: 503 DKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
D+V+Y T++ + + + + +F+NE ++G D I++ K ++ +L
Sbjct: 339 DRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDML 398
Query: 563 QDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
M ++G + Y++ + L A +A L +N E
Sbjct: 399 DVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENME 437
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 131/299 (43%), Gaps = 2/299 (0%)
Query: 274 RAFEALKFFRD-MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
R E + F D M++K I + + Y ++ + + + A ++ E G + +
Sbjct: 145 RRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSY 204
Query: 333 LKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLIS 392
L+ + + G + L V + M + +K S A++ +R + + E++ S
Sbjct: 205 NGLIHLLLP-GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKS 263
Query: 393 QGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 452
G P TY I A R A +F EM +G V+ Y+ ++ G++
Sbjct: 264 IGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDK 323
Query: 453 AMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
A L KM+A P+ Y +LMD G+ +L V++ W EME PD V+YT +I
Sbjct: 324 AKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIE 383
Query: 513 AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
A ++ + D + G + M+ K +++E ++LL++M+S G K
Sbjct: 384 ALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVK 442
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 9/224 (4%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN----AYCRIALYSKAEKVFIE 424
I S + G A ++ G I +Y +I+ +C AL KV+
Sbjct: 171 TIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFCNEAL-----KVYKR 225
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M +G + YS+++ G+ G R M L+ +MK+ G PN++ Y + GRA+
Sbjct: 226 MISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARR 285
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGI 544
+ ++KEM+ PD ++YT +I A A + D + Y + R + DR
Sbjct: 286 IDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYIT 345
Query: 545 MVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
++ F K+ +E + + +M+ +G D Y + AL +G
Sbjct: 346 LMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSG 389
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 112/527 (21%), Positives = 219/527 (41%), Gaps = 23/527 (4%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+++ SH V D F G + D +T + ++NE + + + P+ T +LI
Sbjct: 329 VKMRASSHSPDRVTYITLMDKF--GKVGDLETVK---RFWNEME-VDGYAPDVVTYTILI 382
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
L +S D + + + P+ HT + ++ ++AR+ A LL+ + G +
Sbjct: 383 EALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLG-V 441
Query: 185 ALLAFNSAM--GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA- 241
AF+ + Y K I +E MK GI + S C + Y + ++ +++
Sbjct: 442 KPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGI-MPSIAACN--ASLYTLAETGRISE 498
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
A + K +P S Y +L K+G+ +A + +M KG D I SLI
Sbjct: 499 AEDIFNDLHKCGLSPDSV-TYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLI 557
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAK 359
+ V A ++F K + P V +L+ +EG + K L++ SM +
Sbjct: 558 NTLYKAGRVDAAWKMF--GRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESG 615
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+ ++++ SK A+K++ ++ C P +TY +II R A
Sbjct: 616 CPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAF 675
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC-EPNVWIYNSLMDM 478
F +M +K V +++ + GR+ DA+ +V + + C + N + LM+
Sbjct: 676 WFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMEC 734
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ + + + V D +I + ++ +++F N G+
Sbjct: 735 ILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHP 794
Query: 539 --RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ +M G+ + E+ ++L +DMKS GT + Y+ ++A
Sbjct: 795 TLESYNCLMDGLLGS-NFTEKALELFEDMKSAGTHPNNFTYNLLLDA 840
>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
Length = 1090
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 207/494 (41%), Gaps = 7/494 (1%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + + L G+ + + A + +P EK T L+ + + D +
Sbjct: 537 PNVCTYQNLLRGLCQGGHLVQ-AKQFMFCLLDIPSAVDEK-TFNALLLGICKYGTLDEAL 594
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
+ E N LPD HT + L++ R K A +LQ+ + G + +A+ + G
Sbjct: 595 DICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGL 654
Query: 197 -NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
N+ + ++ + E + G+ D Y +M Y K G+ + + + ++
Sbjct: 655 INEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPN 714
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
S Y IL K G+ ++L ++ M KGI D Y LI + + +A +
Sbjct: 715 SAS---YNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVK 771
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
++ +G+ D V L+ + E+ + L + MK L S A++NG
Sbjct: 772 FLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLI 831
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
++ + +V +++ G P Y +++NA CR+ +A ++ EM+ G V
Sbjct: 832 RKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEV 891
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
A SS++ + G++ +A+ + + M G P V + +LM + + L + M
Sbjct: 892 AESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLM 951
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
E ++ D VSY +I+ + + + Y E + G + + G ++
Sbjct: 952 ELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRM 1011
Query: 556 EELVKLLQDMKSEG 569
+ +LL+D++ G
Sbjct: 1012 QNGEELLEDIEERG 1025
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/562 (18%), Positives = 223/562 (39%), Gaps = 42/562 (7%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
QT VP + + + G ++ + + A +E + + P + T L+ +
Sbjct: 288 QTLVPSVATYTTMIDGYCRNRRIDK-ALSVLSEME-ITGVMPSELTYSALLNGYCKVSML 345
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSA 192
+ L D K + + C+ L+ + + A +L+ + DG + ++ +++
Sbjct: 346 GPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSAL 405
Query: 193 MGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKL 252
+ G ++ + T + +M+ +GI+ + Y ++ Y K G + F++ R L
Sbjct: 406 INGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGL 465
Query: 253 DSTP--------------------------------FSTHMYKILCDSLGKSGRAFEALK 280
+ P F++ + + DS G+ EA
Sbjct: 466 VANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFS 525
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
+ DM G + Y +L+ + A++ + D + L+L
Sbjct: 526 VYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGIC 585
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
+ G +++ LD+ E M +++GF ++ A+ + + ++ +G +P V
Sbjct: 586 KYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTV 645
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQK-GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
Y ++N A VF E+ K G +AY+S++ Y K G + +++
Sbjct: 646 AYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSD 705
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M PN YN LM + + + L+K M R+ + PD V+Y +I +
Sbjct: 706 MYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGL 765
Query: 520 FDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHS 579
D+ VKF + + G D+ + I++ FS+ S++ ++L MK + + +
Sbjct: 766 IDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSA 825
Query: 580 AMNALRDAGLQMQAQWLQQNFE 601
+N L ++ +L Q+ E
Sbjct: 826 MINGL------IRKNYLDQSHE 841
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 162/364 (44%), Gaps = 3/364 (0%)
Query: 151 DAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYE 210
D TC+ L+ S +F+ A +LQ + +N+ + Y K + + + V E
Sbjct: 154 DVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLSNSATYNTILHWYVKKGRFKAALCVLE 213
Query: 211 KMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLG 270
M+ I D Y +++ +I S + A L + RK D TP Y L +
Sbjct: 214 DMERDSIQADIYTYNIMIDKLCRIKRSAR--AFLLLKRMRKDDLTP-DECTYNTLINGFF 270
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
G+ A F M + ++ + Y ++I + + A + E E G++
Sbjct: 271 GEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSEL 330
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
L+ Y + ++ LD++ +K+ + I+ + +++GF + A ++ + +
Sbjct: 331 TYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSM 390
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
+ G P VTY+++IN CR+A + +++ MQ+ G V Y++++ Y K G +
Sbjct: 391 LEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYV 450
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
+ A+ + +G N I+N+L+ R + + E + M R ++ + VS+ +
Sbjct: 451 KVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCI 510
Query: 511 ISAY 514
I +Y
Sbjct: 511 IDSY 514
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 126/287 (43%)
Query: 271 KSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE 330
K GR AL DM+ I D Y +I I A L K + + D
Sbjct: 201 KKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDEC 260
Query: 331 VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
L+ + EG + V M L S +++G+ + R A+ V ++
Sbjct: 261 TYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEM 320
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
G +P ++TY++++N YC++++ A + ++++ +G + ++ + + G I
Sbjct: 321 EITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEI 380
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
A ++ M G +P+V Y++L++ R + + +++ M++ + P+ V YTT+
Sbjct: 381 SKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTL 440
Query: 511 ISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
I Y +A + +K + + G V + I ++ F + I E
Sbjct: 441 ICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITE 487
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 156/356 (43%), Gaps = 26/356 (7%)
Query: 165 ARKFKI----ANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD 220
ARKF + N LL T+GE F A + +KMKS + +
Sbjct: 148 ARKFPLDVTTCNILLNSLCTNGE-----FRKAED-------------MLQKMKSCCLS-N 188
Query: 221 SGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALK 280
S Y I+ Y K G K A LE R DS + Y I+ D L + R+ A
Sbjct: 189 SATYNTILHWYVKKGRF-KAALCVLEDMER--DSIQADIYTYNIMIDKLCRIKRSARAFL 245
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
+ M++ + D Y +LI F ++ A +F + ++ ++ Y
Sbjct: 246 LLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYC 305
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
++K L V+ M+ + S+ A++NG+ K A+ + L S+G +
Sbjct: 306 RNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKT 365
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
+I+ +C++ SKA+++ M + G D VV YS+++ + ++ + ++++M
Sbjct: 366 MCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRM 425
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+ G PN +Y +L+ + +A ++ K + ++ RR + + V + ++ A+ R
Sbjct: 426 QKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYR 481
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 161/381 (42%), Gaps = 22/381 (5%)
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
I++A + G+S+ V E +RK P IL +SL +G +A + MK
Sbjct: 126 ILKALVEEGESKYVWLFLRESLARKF---PLDVTTCNILLNSLCTNGEFRKAEDMLQKMK 182
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
L + + Y +++ + K A + ++ E + D +Y +++
Sbjct: 183 S-CCLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQAD---------IYTYNIMID 232
Query: 347 KTLDVVES---------MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
K + S M+ L +C ++NGF A V+ ++ Q +P
Sbjct: 233 KLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVP 292
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
TY ++I+ YCR KA V EM+ G + YS+++ Y K + A+ L+
Sbjct: 293 SVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLM 352
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+K++G N + L+D + + + +++ K M + PD V+Y+ +I+ R
Sbjct: 353 VDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRM 412
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ + + + +G + + + ++ + K ++ +K D+ G + ++
Sbjct: 413 AKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIH 472
Query: 578 HSAMNALRDAGLQMQAQWLQQ 598
++ + A G+ +A+ +Q
Sbjct: 473 NALLRAFYREGMITEAEHFRQ 493
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 141/326 (43%), Gaps = 1/326 (0%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
H Y IL + G+ AL + M EKG++ D Y L+ + +VK A +F+E
Sbjct: 610 HTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQE 669
Query: 320 AE-EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR 378
++G+ D L+ Y++ G V ++ M ++ + +++G+ KR
Sbjct: 670 IICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRG 729
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+ ++ +Y+ ++ +G P VTY +I L A K +M +G + +
Sbjct: 730 QFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFD 789
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
++ + + ++ +A+ L MK P+ ++++++ R L Q ++ EM +
Sbjct: 790 ILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQV 849
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+ P+ Y +++A R E D + E + G V ++ + ++EE
Sbjct: 850 GLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEA 909
Query: 559 VKLLQDMKSEGTKLDERLYHSAMNAL 584
V + +M G + + M++L
Sbjct: 910 VIVFSNMMRSGMVPTVATFTTLMHSL 935
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/443 (19%), Positives = 179/443 (40%), Gaps = 42/443 (9%)
Query: 62 FPTIELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLK 121
P + + + + VPD + L+G++ + Q + +Y + K + +
Sbjct: 626 LPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNS 685
Query: 122 LLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITD 181
L+ YL + ++I + D V P++ +
Sbjct: 686 LMNGYL-KGGNVNTIKRMMSDMYQNEVYPNSAS--------------------------- 717
Query: 182 GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+N M GY K + ++ +Y+ M GI D+ Y ++ + G + +A
Sbjct: 718 -------YNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLID-IA 769
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
FLE L+ ++ IL S + + AL+ F MK + ++++I
Sbjct: 770 VKFLE--KMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMI 827
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + E+ E + G+ + + LV G +++ + E MK +
Sbjct: 828 NGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIV 887
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA--E 419
++ +I+ G + AV V+ ++ G +P T+ +++++ C+ + + A
Sbjct: 888 PAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHL 947
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMH 479
K +E+ + D VV+Y+ ++ K I DA+ L +MK+KG PNV Y +L
Sbjct: 948 KRLMELCRLKVD--VVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAM 1005
Query: 480 GRAKNLRQVEKLWKEMERRKVTP 502
++ E+L +++E R + P
Sbjct: 1006 YSTGRMQNGEELLEDIEERGLIP 1028
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 130/341 (38%), Gaps = 83/341 (24%)
Query: 61 NFPTIE-LNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKST 119
N TI+ + D + P++ ++ +HG +K Q + Y Y +K RP+ T
Sbjct: 695 NVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRK--GIRPDNVT 752
Query: 120 LKLLIRYLVQSKKWDS-----------------------IVSLSEDFKIYNVL------- 149
+LLI L + D I S SE K++N L
Sbjct: 753 YRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMK 812
Query: 150 -----PDAHTCSRLVASCVRA----RKFKIANTLLQVFITD---------------GEI- 184
P + T S ++ +R + ++ + +LQV + GEI
Sbjct: 813 CLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEID 872
Query: 185 ----------------ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIM 228
A +A +S + G + ++V+ M +G+V + +M
Sbjct: 873 RAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLM 932
Query: 229 EAY---YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
+ KI D+ + L C+ K+D Y +L L K +AL + +M
Sbjct: 933 HSLCKESKIADALHLKRLMELCR-LKVDVVS-----YNVLITGLCKDKHISDALDLYGEM 986
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
K KG+ + + Y +L + S ++ EEL ++ EE+G++
Sbjct: 987 KSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLI 1027
>gi|413917008|gb|AFW56940.1| plastid transcriptionally active 12-like protein [Zea mays]
Length = 600
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 164/333 (49%), Gaps = 12/333 (3%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA--SLICSFASITEVKLAE 314
FS + +L + GK G A + + M +KG PS+ + L+ ++ + + AE
Sbjct: 138 FSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGY--QPSVISQTGLMEAYGRGKQYRKAE 195
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV-ESMKNAK---LKISDCISCAI 370
+F+ + G P V +++L + EG K + + E + N K K + +
Sbjct: 196 AVFRRMQTSGPQPSP-VTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMM 254
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+ + K Y A K++ Q+ +G VT+ S+++ Y + ++ +MQ+ G
Sbjct: 255 IYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETE---YKEVSNIYDQMQRAGL 311
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK 490
VV+YS ++ YGK R +A+ + +M G P YN L+D + + +
Sbjct: 312 KPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVEEANT 371
Query: 491 LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
+++ M R +V PD SYTT++ AY A E + KF+ + +G + + G ++ +S
Sbjct: 372 VFRAMRRHRVEPDLCSYTTMVLAYVNASEMNGAEKFFRRIKEDGLKPNVVVYGTLMKGYS 431
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
KL+ +E+++++ + M+ +G + ++ +Y + M+A
Sbjct: 432 KLNNLEKVMRVYERMRIQGVEPNQTIYTTIMDA 464
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 189/444 (42%), Gaps = 57/444 (12%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSE--------DFKIYNVLPDAHTCSRLVASCVRAR 166
P L LIR+ Q KKW+ + + E DF + L LV + +
Sbjct: 103 PRDVILGTLIRF-KQLKKWNIVSEILEWLRTQHWWDFSEMDFL-------MLVTAYGKLG 154
Query: 167 KFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
F A +L+ G + ++++ M Y + Y V+ +M+++G Y
Sbjct: 155 DFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVFRRMQTSGPQPSPVTYQ 214
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
I+++ + ++ A+F + + K S M+ ++ K+G +A K F M
Sbjct: 215 IILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYAQARKLFAQM 274
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
E+GI + SL+ SF E +KE
Sbjct: 275 SERGIPLSTVTFNSLM-SF---------ETEYKEVS------------------------ 300
Query: 346 EKTLDVVESMKNAKLKISDCISCA-IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
++ + M+ A LK D +S + ++ + K R A+ V+E+++ G P + +Y
Sbjct: 301 ----NIYDQMQRAGLK-PDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNI 355
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+++A+ L +A VF M++ + + +Y++MV Y + A ++K G
Sbjct: 356 LLDAFAISGLVEEANTVFRAMRRHRVEPDLCSYTTMVLAYVNASEMNGAEKFFRRIKEDG 415
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+PNV +Y +LM + + NL +V ++++ M + V P++ YTT++ A R +F V
Sbjct: 416 LKPNVVVYGTLMKGYSKLNNLEKVMRVYERMRIQGVEPNQTIYTTIMDAQGRNSDFGNAV 475
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGV 548
++ E G D+ I++ +
Sbjct: 476 IWFKEMEARGYPPDQKAKNILLSL 499
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 68/159 (42%), Gaps = 3/159 (1%)
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
Q +D + + +V YGK G A ++ M KG +P+V LM+ +GR K R
Sbjct: 133 QHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYR 192
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF---RMNGGVIDRAIAG 543
+ E +++ M+ P V+Y ++ + ++ + + + D+ +
Sbjct: 193 KAEAVFRRMQTSGPQPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFH 252
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+M+ ++ K + KL M G L ++S M+
Sbjct: 253 MMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMS 291
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 114 RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANT 173
RP + + +L+ S + ++ + + V PD + + +V + V A + A
Sbjct: 347 RPTRKSYNILLDAFAISGLVEEANTVFRAMRRHRVEPDLCSYTTMVLAYVNASEMNGAEK 406
Query: 174 LLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
+ DG + ++ + + M GY+KL+ + VYE+M+ G+ + Y IM+A
Sbjct: 407 FFRRIKEDGLKPNVVVYGTLMKGYSKLNNLEKVMRVYERMRIQGVEPNQTIYTTIMDAQG 466
Query: 233 KIGDSEKVAALFLECKSR 250
+ D F E ++R
Sbjct: 467 RNSDFGNAVIWFKEMEAR 484
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 183/404 (45%), Gaps = 20/404 (4%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ F + M G + + + ++M G+ + Y I++ K+GD+ V+AL L
Sbjct: 81 VVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT--VSALNL 138
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
K +L +Y + D L K GR +A F +M++KGI D Y+ +I F
Sbjct: 139 LRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFC 198
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
S + A+ L +E + + D L+ ++EG + D+++ M ++ + +
Sbjct: 199 SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV-CPNV 257
Query: 366 ISC-AIVNGFSKRRGYWAAVKVYEQLIS-----------QGCIPGQVTYASIINAYCRIA 413
++C +++G A+++++ + G P TY +I+
Sbjct: 258 VTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEG 317
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+ +AE+++ EM +G V YSSM+ K R+ +A + M +K PN+ +N
Sbjct: 318 KFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFN 377
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
+L+ + +A + +L+ EM RR + + ++Y T+I + + + + + E +
Sbjct: 378 TLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISS 437
Query: 534 GGVIDR-AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
G D I ++ G++SK EEL K L ++ +D L
Sbjct: 438 GVYPDTITIRNMLTGLWSK----EELKKALAMLEELQMSMDHHL 477
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 138/339 (40%), Gaps = 45/339 (13%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
+ L + L + GR EA+ M E G+ + Y +++ + + A L ++ E
Sbjct: 84 FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 143
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E ++ P+V I AI++G K +
Sbjct: 144 ELSHIK-PDVV---------------------------------IYSAIIDGLWKDGRHT 169
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A ++ ++ +G P VTY+ +IN +C +S+A+++ EM + VV +S ++
Sbjct: 170 DAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLI 229
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER---- 497
K G + A L+ +M + G PNV N+L+D + L+ +++K M++
Sbjct: 230 NALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMD 289
Query: 498 -------RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFS 550
V PD +Y +IS +F + Y E G V D M+
Sbjct: 290 IDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLC 349
Query: 551 KLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
K S+++E ++ M S+ + +++ + AG+
Sbjct: 350 KQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGM 388
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/343 (19%), Positives = 135/343 (39%), Gaps = 35/343 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + + + G+ KD + + A + + E + F P+ T +I S KW
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTD-AQNLFIEMQDKGIF-PDIVTYSCMINGFCSSGKWSEAQ 207
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGY 196
L ++ + + PD T S L+ + V+ A LLQ I+ G ++ N+ + G
Sbjct: 208 RLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGL 267
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
+ +++ M+ + + +D+ + +
Sbjct: 268 CDSGKLKDALEMFKAMQKSMMDIDA---------------------------THAFNGVE 300
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y IL L G+ EA + + +M +GI+ D Y+S+I + + A ++
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQM 360
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F K + L+ Y + G+V+ L++ M + + ++ GF K
Sbjct: 361 FDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRK 420
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
++ +++++IS G P +T +++ L+SK E
Sbjct: 421 VGNINGSLDIFQEMISSGVYPDTITIRNMLT-----GLWSKEE 458
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
L Q C P VT+ +++N CR +A + M + G + Y ++V K G
Sbjct: 72 LFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 131
Query: 450 IRDAMWLVAKMKA-KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
A+ L+ KM+ +P+V IY++++D + + L+ EM+ + + PD V+Y+
Sbjct: 132 TVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYS 191
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I+ + + ++ + E + D ++ K + LLQ+M S
Sbjct: 192 CMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS 251
Query: 569 GTKLDERLYHSAMNALRDAG 588
G + ++ ++ L D+G
Sbjct: 252 GVCPNVVTCNTLLDGLCDSG 271
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+ + +L G P VT+ ++++ C S+A +F +M + VV +++++
Sbjct: 34 ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPN----VVTFTTLMN 89
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER-RKVT 501
+ GR+ +A+ L+ +M G +PN Y +++D + + L ++ME +
Sbjct: 90 GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIK 149
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PD V Y+ +I + + E + G D M+ F + E +L
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
LQ+M D + +NAL G AQ L Q
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 175/395 (44%), Gaps = 39/395 (9%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
V+ M S GI + +M+A+ + + + +L + K P S +Y++L
Sbjct: 187 VFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRD--MTKHGCVPNSI-IYQMLIH 243
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---CSFASITEV-KLAEELF------ 317
+L ++ R EA+K +M G D + +I C I E KL + +
Sbjct: 244 ALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTA 303
Query: 318 ----------------KEAEEKGMLR---DPEVCL--KLVLMYIEEGLVEKTLDVV-ESM 355
K E + ML +P L L+ Y+ G E+ D++ ++M
Sbjct: 304 DALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNM 363
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
A + +++G K+ +A++ ++++ +G P +TY +I+ +C+ +
Sbjct: 364 VIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHF 423
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+A KV M KG V Y+ ++ K G+I+DA+ + +M +KGC+P+++ +NSL
Sbjct: 424 EEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSL 483
Query: 476 MDMHGRAKN--LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
++G KN + + L+++M V + V+Y T+I A+ R K E R
Sbjct: 484 --IYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFR 541
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
G +D ++ K E+ + L++ M E
Sbjct: 542 GCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGE 576
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 176/425 (41%), Gaps = 15/425 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA--- 171
P ++LI L ++ + + + L E+ + PD T + ++ +A + A
Sbjct: 233 PNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKL 292
Query: 172 --NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
LL+ F D I M G ++ + K+ + VL Y ++
Sbjct: 293 HDRMLLRDFTADALIQ----GYLMHGLCRMGKVDEARAMLSKIPNPNTVL----YNTLIN 344
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
Y G E+ L K+ + + I+ D L K G AL+F +M +KG
Sbjct: 345 GYVVSGRFEEAKDLLY--KNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKG 402
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
+ Y LI F + A ++ KG+ + L+ ++G ++ L
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDAL 462
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
+ M + K +++ G K A+ +Y ++ +G I VTY ++I+A+
Sbjct: 463 QMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAF 522
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
R+ L +A+K+ EM+ +G + Y+ ++ KTG + L+ +M + P++
Sbjct: 523 LRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSI 582
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
N L++ R + + ++M +R +TPD V+Y ++I+ + F + +N
Sbjct: 583 NSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNG 642
Query: 530 FRMNG 534
+ G
Sbjct: 643 LQAKG 647
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/439 (20%), Positives = 190/439 (43%), Gaps = 11/439 (2%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + F+ +HG+ K + E A ++ L +F + L+ L + K D
Sbjct: 268 PDVQTFNDVIHGLCKAGRIHEAAK--LHDRMLLRDFTADALIQGYLMHGLCRMGKVDEAR 325
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL--QVFITDGEIALLAFNSAMGG 195
++ KI N P+ + L+ V + +F+ A LL + I E FN + G
Sbjct: 326 AMLS--KIPN--PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDG 381
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K S + ++M G + Y +++ + K G E+ + + ++ L
Sbjct: 382 LCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLS-- 439
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+T Y L +L K G+ +AL+ + +M KG D + SLI +++ A
Sbjct: 440 -LNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALG 498
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L+++ +G++ + L+ ++ L+++ +V M+ + + ++
Sbjct: 499 LYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALC 558
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K + + EQ+ + P + +IN++CR + A + +M Q+G +V
Sbjct: 559 KTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIV 618
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y+S++ K GR ++A+ L ++AKG P+ YN+L+ + +L +
Sbjct: 619 TYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKG 678
Query: 496 ERRKVTPDKVSYTTVISAY 514
P++++++ +I+ +
Sbjct: 679 VSNGFIPNEITWSILINYF 697
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 154/366 (42%), Gaps = 13/366 (3%)
Query: 235 GDSEKVAA-LFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G+ KVA +F + SR + T ++ + ++ + A RDM + G + +
Sbjct: 178 GNCPKVAPNVFYDMLSRGISPTVYT---FGVVMKAFCMVNEVDSACSLLRDMTKHGCVPN 234
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
IY LI + + V A +L +E G D + ++ + G + + + +
Sbjct: 235 SIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHD 294
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQ--LISQGCIPGQVTYASIINAYCR 411
M + D + A++ G+ G KV E ++S+ P V Y ++IN Y
Sbjct: 295 RML-----LRDFTADALIQGY-LMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVV 348
Query: 412 IALYSKAEKV-FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
+ +A+ + + M GF+ ++ M+ K G + A+ + +M KG EPNV
Sbjct: 349 SGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVI 408
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
Y L+D + + + K+ M + ++ + V Y +I A + + ++ Y E
Sbjct: 409 TYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM 468
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
G D ++ K ++EE + L +DM EG + Y++ ++A L
Sbjct: 469 SSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELI 528
Query: 591 MQAQWL 596
QA L
Sbjct: 529 QQADKL 534
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 105/240 (43%), Gaps = 9/240 (3%)
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
++G + +Y LI ++ E K+ ++L K+ +++G + + + ++ Y + GL
Sbjct: 87 QRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPG 146
Query: 347 KTLDVVESMKNA-----KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
+ ++ M K + + +V G + A V+ ++S+G P T
Sbjct: 147 QATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPK----VAPNVFYDMLSRGISPTVYT 202
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+ ++ A+C + A + +M + G + Y ++ + R+ +AM L+ +M
Sbjct: 203 FGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMF 262
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
GCEP+V +N ++ +A + + KL M R T D + ++ R + D
Sbjct: 263 LMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVD 322
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 116/561 (20%), Positives = 226/561 (40%), Gaps = 35/561 (6%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
VPDA +++ + + ++QE A D K P+ + ++I L +
Sbjct: 233 VPDAFSYNTVIKSLCGGSRSQE-ALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKA 291
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGG 195
+L + V+P+ T + +V + +AR A +L Q+F + + + + + G
Sbjct: 292 CNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHG 351
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRKLD 253
Y+ L + ++++M G++ D + +M++ K S++ A +F + K K D
Sbjct: 352 YSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPD 411
Query: 254 STPFS------------------------------THMYKILCDSLGKSGRAFEALKFFR 283
+S +H + IL ++ K G EAL F
Sbjct: 412 IISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFT 471
Query: 284 DMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEG 343
+M+ +G+ + YA++I + + + A E + G+ + V L+ + G
Sbjct: 472 EMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHG 531
Query: 344 LVEKTLDVVESMKNAKLKISD-CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTY 402
+ K ++V M + + + +I++ A V+ +I G P T+
Sbjct: 532 DLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTF 591
Query: 403 ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKA 462
S+I+ YC + KA V M G + VV YS+++ Y K+GRI D + L +M
Sbjct: 592 NSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLC 651
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
K +P Y+ ++D RA +K++ EM +YT ++ R D
Sbjct: 652 KRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDE 711
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ +++ + AI M+ K+ + EE L + + G + Y +
Sbjct: 712 AITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMII 771
Query: 583 ALRDAGLQMQAQWLQQNFEGT 603
L G +A + + E T
Sbjct: 772 NLLKEGSVEEADIMFSSMEKT 792
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 144/332 (43%), Gaps = 4/332 (1%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--CSFASITEVKLA 313
P + H Y IL D ++ R FF + G+ D + + + +A T+ L+
Sbjct: 162 PLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALS 221
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVN 372
L E G + D ++ ++ LD++ M D +S +++
Sbjct: 222 M-LLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIH 280
Query: 373 GFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK 432
G A ++ +++ +G +P VTY SI++A C+ KAE V +M
Sbjct: 281 GLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQP 340
Query: 433 CVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLW 492
V Y++M+ Y GR ++A + +M +G P++ +NSLMD + K ++ +++
Sbjct: 341 DEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIF 400
Query: 493 KEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
+ + PD +SY+ ++ Y F ++ NG V D I++ +K
Sbjct: 401 HSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKR 460
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
++E + + +M+ +G + Y + + AL
Sbjct: 461 GMMDEALLIFTEMRGQGVSPNVVTYATVIAAL 492
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 144/328 (43%), Gaps = 8/328 (2%)
Query: 274 RAFEALK-FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVC 332
R EAL M E G + D Y ++I S + + A ++ KG P+V
Sbjct: 215 RTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMT-KGDGCSPDVV 273
Query: 333 LKLVLMY--IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
++++ EG + K ++ M + + +IV+ K R A V Q+
Sbjct: 274 SYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQM 333
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
P +VTY ++I+ Y + + +A K+F EM ++G +V ++S++ K R
Sbjct: 334 FDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRS 393
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE--KLWKEMERRKVTPDKVSYT 508
++A + + KG +P++ Y+ L +HG A R V+ L+ M + D +
Sbjct: 394 KEAAEIFHSIATKGHKPDIISYSIL--LHGYATEGRFVDMNNLFHSMTDNGIVADSHCFN 451
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
+I+A+ + D + + E R G + ++ ++ ++ + ++ L M S
Sbjct: 452 ILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISI 511
Query: 569 GTKLDERLYHSAMNALRDAGLQMQAQWL 596
G K + +YHS + G ++A+ L
Sbjct: 512 GLKPNTVVYHSLIQGFCTHGDLIKAKEL 539
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/491 (17%), Positives = 195/491 (39%), Gaps = 13/491 (2%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+PD F+S + + K +++E A +++ A K +P+ + +L+ ++ +
Sbjct: 374 IPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATK--GHKPDIISYSILLHGYATEGRFVDM 431
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA---LLAFNSAM 193
+L ++ D+H + L+ + A++ + LL G+ ++ + + +
Sbjct: 432 NNLFHSMTDNGIVADSHCFNILINA--HAKRGMMDEALLIFTEMRGQGVSPNVVTYATVI 489
Query: 194 GGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLD 253
++ + +M S G+ ++ Y +++ + GD K L E + +
Sbjct: 490 AALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGI- 548
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
P T I+ SL GR A F + G D + SLI + + ++ A
Sbjct: 549 PRPNITFFSSII-HSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKA 607
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
+ G D L+ Y + G ++ L + M ++K + +++G
Sbjct: 608 FGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDG 667
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
+ AA K++ ++I G TY I+ CR +A +F ++
Sbjct: 668 LFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFE 727
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ ++M+ K R +A L A + A G PN Y ++ + ++ + + ++
Sbjct: 728 IAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFS 787
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI--DRAIAGIMVGVFSK 551
ME+ P +I + E + Y +++G +I + + +++ +F+
Sbjct: 788 SMEKTGCAPSSRLLNDIIRMLLQKGE--IVKAGYYMSKVDGTIISLEASTTSLLISLFAS 845
Query: 552 LSQIEELVKLL 562
+ E +K L
Sbjct: 846 KGRYREQIKFL 856
>gi|224076898|ref|XP_002305039.1| predicted protein [Populus trichocarpa]
gi|222848003|gb|EEE85550.1| predicted protein [Populus trichocarpa]
Length = 800
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/472 (21%), Positives = 206/472 (43%), Gaps = 23/472 (4%)
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQ-TQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLV 128
D Q + DA+ + + G K ++ LA E+K + + + +++Y
Sbjct: 329 DMEKQELISDARCYSELIRGYCKAGDLSKALALHNDMESKGI---KTNCVIVSTILQYFC 385
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALL 187
+ +V + FK + D + + +V + + K A LL ++ ++ ++
Sbjct: 386 EKGMHSQVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIM 445
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+ + + GY + V+E+M+ G+ D + ++ A+ + G + + L+
Sbjct: 446 HYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYM 505
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
KS+ L + + ++ + L G+ EA FF +M++K I Y ++I +
Sbjct: 506 KSQDLKPNAIT---HNVMIEGLCIGGKVTEAEAFFCNMEDKSI----DNYGAMITGYCEA 558
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
+ A ELF E E+G+L D KL+ EEG ++ L ++++M + ++ S +
Sbjct: 559 KHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMY 618
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++ + A V++ L G P TY ++IN CR S+A +F +M+
Sbjct: 619 GKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKH 678
Query: 428 KGFDKCVVAYSSMVAMYGKT------GRIRDAMWLVA-----KMKAKGCEPNVWIYNSLM 476
+G +V ++ ++ + K R R + L A +M+ P+V Y +L+
Sbjct: 679 RGIKPDLVTFTVLLDGHLKRVHSEAFARKRKEVNLAASNIWKEMQNTEIRPDVICYTALI 738
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
D H + L L+ EM R V PD+ + T ++S + DM + N
Sbjct: 739 DGHCKVDRLEDAIGLYDEMMYRGVEPDRATCTALLSGCRNRGDVDMVLTKLN 790
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 180/393 (45%), Gaps = 7/393 (1%)
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYK 263
+ + +Y+++KS G+ + Y I++A+ + G + + +F E +L + + Y
Sbjct: 217 AALAIYKQLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQE---MELCGVIPNAYAYT 273
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
+ L + R+ + + KE I D Y ++I F + ++ AE + + E++
Sbjct: 274 TYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQ 333
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
++ D +L+ Y + G + K L + M++ +K + I I+ F ++ +
Sbjct: 334 ELISDARCYSELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQV 393
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
V+ +++ +V+Y +++A C++ +A + EM+ K D ++ Y++++
Sbjct: 394 VEEFKRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLING 453
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
Y G++ DA + +M+ KG EP+V +N L+ R + KL++ M+ + + P+
Sbjct: 454 YCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPN 513
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+++ +I + F+ M ID G M+ + + E+ +L
Sbjct: 514 AITHNVMIEGLCIGGKVTEAEAFF--CNMEDKSIDN--YGAMITGYCEAKHTEKASELFF 569
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ G +D + + L + G + +A WL
Sbjct: 570 ELSERGLLMDRGYIYKLLEKLCEEGEKDRALWL 602
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/494 (20%), Positives = 207/494 (41%), Gaps = 45/494 (9%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P F+ ++ ++ + + + A Y + K L P T ++I+ +
Sbjct: 196 LPHIFTFNYLMNKLIANGKV-DAALAIYKQLKSLG-LNPNDYTYSIIIKAFCRKGSLVEA 253
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL--LAFNSAMG 194
++ ++ ++ V+P+A+ + + ++ +LQ + +G I + A+ + +
Sbjct: 254 SNVFQEMELCGVIPNAYAYTTYIEGLCANQRSDFGYQVLQAW-KEGNIPIDVYAYVAVIR 312
Query: 195 GY-NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF--LECKSRK 251
G+ N++ M + +++ + M+ ++ D+ CY +++ Y K GD K AL +E K K
Sbjct: 313 GFCNEMKMDRAEVVLGD-MEKQELISDARCYSELIRGYCKAGDLSKALALHNDMESKGIK 371
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
+ ST + + C+ G + E K F+D++ I D Y ++ + + +V
Sbjct: 372 TNCVIVST-ILQYFCEK-GMHSQVVEEFKRFKDLR---IFLDEVSYNIVVDALCKLEKVD 426
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
A L E + K M D L+ Y G + V E M+ L+ ++
Sbjct: 427 QAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILL 486
Query: 372 NGFSKRRGYWAAVKVYEQLISQG---------------CIPGQVT--------------- 401
FS+R A+K+YE + SQ CI G+VT
Sbjct: 487 AAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAEAFFCNMEDKSID 546
Query: 402 -YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
Y ++I YC KA ++F E+ ++G ++ + G A+WL+ M
Sbjct: 547 NYGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKTM 606
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
EP+ +Y ++ RA ++R E ++ + + +TPD +YTT+I+ R
Sbjct: 607 LDLNMEPSKDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRL 666
Query: 521 DMCVKFYNEFRMNG 534
+ + + G
Sbjct: 667 SEARNLFQDMKHRG 680
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 151/369 (40%), Gaps = 12/369 (3%)
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
E + ALF + K R F+ + L + L +G+ AL ++ +K G+ +
Sbjct: 181 DEAINALF-QIKRRGFLPHIFT---FNYLMNKLIANGKVDAALAIYKQLKSLGLNPNDYT 236
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD----VV 352
Y+ +I +F + A +F+E E G++ + YIE + D V+
Sbjct: 237 YSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYA----YTTYIEGLCANQRSDFGYQVL 292
Query: 353 ESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 412
++ K + I A++ GF A V + Q I Y+ +I YC+
Sbjct: 293 QAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYSELIRGYCKA 352
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
SKA + +M+ KG V S+++ + + G + + K + Y
Sbjct: 353 GDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSY 412
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
N ++D + + + Q L EM+ +++ D + YTT+I+ Y + + + E
Sbjct: 413 NIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEG 472
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
G D I++ FS+ E +KL + MKS+ K + ++ + L G +
Sbjct: 473 KGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTE 532
Query: 593 AQWLQQNFE 601
A+ N E
Sbjct: 533 AEAFFCNME 541
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 119/303 (39%), Gaps = 35/303 (11%)
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
LV Y+ G++++ ++ + +K ++N AA+ +Y+QL S G
Sbjct: 170 LVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYKQLKSLG 229
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
P TY+ II A+CR +A VF EM+ G AY++ + R
Sbjct: 230 LNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQRSDFGY 289
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
++ K +V+ Y +++ + + E + +ME++++ D Y+ +I Y
Sbjct: 290 QVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYSELIRGY 349
Query: 515 NRAREFDMCVKFYNEFRMNG------------------GV-----------------IDR 539
+A + + +N+ G G+ +D
Sbjct: 350 CKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDE 409
Query: 540 AIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQN 599
I+V KL ++++ V LL +MK + +D Y + +N G + A + +
Sbjct: 410 VSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEE 469
Query: 600 FEG 602
EG
Sbjct: 470 MEG 472
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 87/201 (43%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
Y +++ +Y + +A +++++GF + ++ ++ G++ A+ + ++
Sbjct: 166 VYDALVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYKQL 225
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
K+ G PN + Y+ ++ R +L + +++EME V P+ +YTT I +
Sbjct: 226 KSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQRS 285
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
D + ++ ID ++ F +++ +L DM+ + D R Y
Sbjct: 286 DFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYSEL 345
Query: 581 MNALRDAGLQMQAQWLQQNFE 601
+ AG +A L + E
Sbjct: 346 IRGYCKAGDLSKALALHNDME 366
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 163/385 (42%), Gaps = 3/385 (0%)
Query: 204 STILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYK 263
S V+ M G + Y ++ ++G ++ +F K R+ D P + Y
Sbjct: 22 SAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFK--KMREDDCYP-TVRTYT 78
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
++ +L +SGR EA+ F +M+E+G + Y +I + T+++ + E EK
Sbjct: 79 VIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEK 138
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G++ L+ Y +EG+VE ++++ M + ++ ++ GF +++ A
Sbjct: 139 GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRA 198
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+ + +++ P VTY S+I+ C+I A ++ M + G YS +
Sbjct: 199 MALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDT 258
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
K GRI +A L +K KG + N IY +L+D + +A + L M P+
Sbjct: 259 LCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPN 318
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+Y +I + R+ + G I++ K + ++L
Sbjct: 319 SSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILD 378
Query: 564 DMKSEGTKLDERLYHSAMNALRDAG 588
M S G + D +Y + ++A G
Sbjct: 379 QMVSSGYQPDVYIYTAFIHAFCTRG 403
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/437 (21%), Positives = 183/437 (41%), Gaps = 49/437 (11%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAKKLPE--FRPEKSTLKLLIRYLVQSKKWDSIVSLS 140
+ + +HG+ + + E N KK+ E P T +++ L +S + ++L
Sbjct: 42 YTNLIHGLCEVGRVDE----GINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLF 97
Query: 141 EDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKL 199
+ + P+ HT + ++ + + K + +L + G + ++ +N+ + GY K
Sbjct: 98 SEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKE 157
Query: 200 HMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDS--TPF 257
M + + + M S + Y +++ + + + + AL S+ L+S TP
Sbjct: 158 GMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALL----SKMLESRLTP- 212
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
S Y L K G A + M E G++ D Y+ I + ++ A LF
Sbjct: 213 SVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLF 272
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+EKG +K ++ I A+++G+ K
Sbjct: 273 NSLKEKG-----------------------------------IKANEVIYTALIDGYCKA 297
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A + ++++++ C+P TY ++I+ C+ +A + M QKG V Y
Sbjct: 298 GKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTY 357
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+ ++ K G A ++ +M + G +P+V+IY + + N+++ E + M
Sbjct: 358 TILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFE 417
Query: 498 RKVTPDKVSYTTVISAY 514
R V PD ++YT VI AY
Sbjct: 418 RGVMPDALTYTLVIDAY 434
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 160/429 (37%), Gaps = 41/429 (9%)
Query: 72 HHQTAVPDAKKFDSFLHGMLKDPQTQE-LAYDYYNEAKKLPEFR--PEKSTLKLLIRYLV 128
H + P+ + ++ + G + +A K+ E R P T LI
Sbjct: 171 HSNSCNPNERTYNELICGFCRKKNVHRAMAL-----LSKMLESRLTPSVVTYNSLIHGQC 225
Query: 129 QSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LL 187
+ DS L V+PD T S + + + + + AN L G A +
Sbjct: 226 KIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEV 285
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
+ + + GY K + ++M + + +S Y +++ K KV L
Sbjct: 286 IYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCK---ERKVQEALLLM 342
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+S + Y IL ++ K G A + M G D IY + I +F +
Sbjct: 343 ESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTR 402
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD-CI 366
+K AE++ E+G++ D ++ Y GL+ DV++ M + S
Sbjct: 403 GNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTY 462
Query: 367 SCAI----------------------------VNGFSKRRGYWAAVKVYEQLISQGCIPG 398
SC I V K + A++++E+++ GC P
Sbjct: 463 SCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPN 522
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
TYA +I C++ A+K+F M ++G Y+S++ + G DA+ LV
Sbjct: 523 INTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVG 582
Query: 459 KMKAKGCEP 467
M G P
Sbjct: 583 AMMEHGHLP 591
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 405 IINAYCRIALYSKAE---------KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
++N YC++ +A VF M +KG + V+Y++++ + GR+ + +
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE--KLWKEMERRKVTPDKVSYTTVISA 513
+ KM+ C P V Y + +H ++ R++E L+ EM R P+ +YT +I+A
Sbjct: 61 IFKKMREDDCYPTVRTYTVI--VHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINA 118
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
+ + + + +E G V ++ + K +E ++L M S +
Sbjct: 119 MCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPN 178
Query: 574 ERLYH 578
ER Y+
Sbjct: 179 ERTYN 183
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 87/450 (19%), Positives = 169/450 (37%), Gaps = 63/450 (14%)
Query: 72 HHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSK 131
+ VPD + F+ + K + +E A +N K+ + + LI ++
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEE-ANVLFNSLKE-KGIKANEVIYTALIDGYCKAG 298
Query: 132 KWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG--------E 183
K D SL + + LP++ T + L+ + RK + A L++ I G
Sbjct: 299 KMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYT 358
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
I ++A G ++ H + ++M S+G D Y + A+ G+ ++ +
Sbjct: 359 ILIVAMLKE-GDFDYAHR------ILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDM 411
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
R + + Y ++ D+ G G A + M + G DPS + +
Sbjct: 412 MSMMFERGVMPDALT---YTLVIDAYGGLGLLNPAFDVLKRMFDTGC--DPSHH-----T 461
Query: 304 FASITEVKLAEELFKEAEEKGMLRD-PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKI 362
++ + + L EEL K+ + + P V V + E L++ E M
Sbjct: 462 YSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSP 521
Query: 363 SDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS------ 416
+ ++ G K A K+++ + +G P + Y S++N C + +Y
Sbjct: 522 NINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLV 581
Query: 417 -----------------------------KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
KA+ VF + Q G++ VA+ ++ K
Sbjct: 582 GAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKN 641
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
G L+ M+A+GC+ + Y L++
Sbjct: 642 GLSDGCSELLGVMEARGCQIHPQTYRMLIE 671
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 121/537 (22%), Positives = 222/537 (41%), Gaps = 100/537 (18%)
Query: 139 LSEDFKIYN------VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNS 191
L E F +YN ++PD S L+ RA K + N+L + + G ++ ++ F+S
Sbjct: 291 LDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSS 350
Query: 192 AMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK 251
M Y ++ I VY +M GI + Y ++ + G + +F + +
Sbjct: 351 IMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQG 410
Query: 252 LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
L+ + + Y L D KS + + M KG + D + + LI + +
Sbjct: 411 LEPSVLT---YSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMD 467
Query: 312 LAEELFKEAEEKGM-------------------LRD--------------PEVCLKLVLM 338
A F +A ++G+ RD P+V VL+
Sbjct: 468 EALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLV 527
Query: 339 --YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRR---------------GYW 381
E+G +++ L + + I C +++GF K+R G +
Sbjct: 528 KGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIF 587
Query: 382 AAVKVYEQLIS----QGCI----------------PGQVTYASIINAYCRIALYSKAEKV 421
+ +Y LI+ +GC+ P VTY ++I YC + ++SKA K+
Sbjct: 588 PDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKL 647
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F ++ + ++ ++ Y K GR+ DAM + + M +G EPN+ Y+ L+D + +
Sbjct: 648 FEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFK 707
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE-----FRMNGG- 535
+N +L+++M +V+P+ VSY+ +I +C K E F+ G
Sbjct: 708 TENTESAFELYEKMLGDRVSPNIVSYSILIDG--------LCKKGLMEEASLAFQCAIGR 759
Query: 536 -VIDRAIA-GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
++ IA GI++ + K+ ++ E + L M G D+ L AL + G Q
Sbjct: 760 HLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLL----QKALAEYGFQ 812
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 151/384 (39%), Gaps = 72/384 (18%)
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G+ VA+ F + R S T + L + K R EA + M EKGI+ D
Sbjct: 252 MGNQIGVASDFFDMMVRSGPSPNLVT--FSTLINVYCKELRLDEAFSLYNLMIEKGIVPD 309
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
IY+ LI +++ LF A +G V+ + +
Sbjct: 310 LVIYSILINGLFRAGKLEEGNSLFSMALARG--------------------VKMDVVIFS 349
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
S+ +A +++ D A++VY +++ +G P VTY+ +IN CR
Sbjct: 350 SIMDAYVRVGD---------------LGKAIEVYTRMLKEGISPNVVTYSILINGLCRNG 394
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV---- 469
+A VF ++ ++G + V+ YSS++ + K+ +RD L M KG P+V
Sbjct: 395 RVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCS 454
Query: 470 -------------------------------WIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
+++N+L+D R K R K++ M
Sbjct: 455 MLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMY 514
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
KV PD V+YT ++ D + + + G D I ++ F K
Sbjct: 515 KVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATG 574
Query: 559 VKLLQDMKSEGTKLDERLYHSAMN 582
+++ + M+S G D +Y+ +N
Sbjct: 575 LQIFKLMQSNGIFPDICIYNVLIN 598
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/519 (21%), Positives = 212/519 (40%), Gaps = 50/519 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P K + LHG+ K + A D++ ++ +T +LI LV++
Sbjct: 188 PSLKTHNLVLHGLCKSGKVLA-AMDHFEAVRR--SMPVSAATFSILINGLVKAGMMIQAH 244
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA-FNSAMGGY 196
SL+++ D HT + +V + +K + A L++ +G +A +N+ + G
Sbjct: 245 SLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGL 304
Query: 197 NKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTP 256
K+ I + K ++D+GC ++
Sbjct: 305 CKMGRLEEAIDLLRK------IVDNGCTPDVV---------------------------- 330
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
Y L D LGK R+FEA K F++M +G+ D Y +LI ++ A +
Sbjct: 331 ----TYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSV 386
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
+K G + D ++ + G + + + +SM+ L ++ + A+++G K
Sbjct: 387 YKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 446
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
R A+++ Q+ C P +TY +I+ C+ A F EM + G V
Sbjct: 447 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 506
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y+ +++ K G A ++ M + + ++Y+SL+D ++ L L+ EME
Sbjct: 507 YNILISGLCKAGNTDAACGVLDDMSS-----SRFVYSSLVDGLCKSGKLEGGCMLFHEME 561
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
R V + + T +I +A D V +N R G A I+ + K ++
Sbjct: 562 RSGVANSQ-TRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALI-KSGKVN 619
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
E + Q+M + K D Y++ +N + A +A +
Sbjct: 620 EGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRAHY 657
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/372 (19%), Positives = 147/372 (39%), Gaps = 24/372 (6%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
I+L R PD + S + G+ K+ ++ E AY + E + LI
Sbjct: 314 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE-AYKLFKEMASR-GLALDTVCYTALI 371
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI 184
R L+Q+ K S+ + + +PD T S ++ +A + A + + G
Sbjct: 372 RGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA 431
Query: 185 A-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
+ +++ + G K + + +MK A D+ Y +++ K GD E A
Sbjct: 432 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAF 491
Query: 244 FLE-----CKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
F E CK + Y IL L K+G A DM +Y+
Sbjct: 492 FDEMLEAGCKP--------DVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYS 538
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
SL+ +++ LF E E G + + + +L+ + V++ + + +++
Sbjct: 539 SLVDGLCKSGKLEGGCMLFHEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKE 597
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+ + +I++ K VY+++ ++ P +VTY +++N +A
Sbjct: 598 GMPHPYAYN-SIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRA 655
Query: 419 EKVFIEMQQKGF 430
++EM +G+
Sbjct: 656 HYYYLEMTGRGY 667
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 169/407 (41%), Gaps = 32/407 (7%)
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL-----LA 188
D L E +LPD T + +++ RA K A+ + + DGE+ L +
Sbjct: 236 DEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVT 295
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
FN + G+ + M + E MK G + Y + + G + ++ E
Sbjct: 296 FNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMV 355
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
++ +S Y I+ D L ++ +A + M G+ D Y +L+ + S
Sbjct: 356 ENGIEPNIYS---YNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKG 412
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
+V A+ + E KG + C L+ +EG + ++++ M ++ D ++C
Sbjct: 413 KVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQL-DTVTC 471
Query: 369 AIV-NGFSKRRGYWAAVKVYEQLISQGC----------------------IPGQVTYASI 405
IV NG + A +V ++ + G +P +TY ++
Sbjct: 472 NIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTL 531
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
IN C++ +A+K FIEM K V Y + V + K G+I A+ ++ M+ GC
Sbjct: 532 INGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGC 591
Query: 466 EPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS 512
+ YNSL+ G + ++ L EM R + PD +Y +I+
Sbjct: 592 SKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMIN 638
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 156/386 (40%), Gaps = 44/386 (11%)
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
STP +Y +L S + R + DM + G+ + + LI S + A
Sbjct: 111 STPLPLQLYHLLLRSSLQQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHA 170
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG 373
ELF + EKG + LV + G ++ L+ V+ ++ + +V+
Sbjct: 171 RELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVDGKMGGN--VNRVVYNTLVSS 228
Query: 374 FSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG---- 429
F K+ A K+ E++ +G +P VT+ S I+A CR +A ++F +MQ G
Sbjct: 229 FCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGL 288
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK---------------------------- 461
VV ++ M+ + + G + +A LV MK
Sbjct: 289 PKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGR 348
Query: 462 -------AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
G EPN++ YN +MD R + +L M V PD V+YTT++ Y
Sbjct: 349 SVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGY 408
Query: 515 -NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLD 573
++ + F+ NE G + ++ K + E ++LQ M + +LD
Sbjct: 409 CSKGKVFE-AKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLD 467
Query: 574 ERLYHSAMNAL-RDAGLQMQAQWLQQ 598
+ +N L R+ L+ ++ + +
Sbjct: 468 TVTCNIVVNGLCRNGELEKASEVVSE 493
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 149/308 (48%), Gaps = 4/308 (1%)
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
L++E MK G+ + Y ++ A K + + A+ + + + D + + L
Sbjct: 368 LLWE-MKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVT---FNTLI 423
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+ + G EALK R+ + + + Y LI F EV +A +L E +G
Sbjct: 424 AAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHT 483
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D L+ + G V++ L V E M ++ I +++G K+R AA +
Sbjct: 484 PDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNL 543
Query: 387 YEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 446
+++ Q P + Y ++I+ + R S A K+F M++KG + +VAY++M+ Y K
Sbjct: 544 LVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCK 603
Query: 447 TGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVS 506
+G + +A+ ++ M+ GC P+ + Y +L+D + + +++ + +M +R+ P+ V+
Sbjct: 604 SGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVT 663
Query: 507 YTTVISAY 514
Y ++I Y
Sbjct: 664 YASLICGY 671
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 138/327 (42%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y +L D + G L +M+ KGI+ Y ++I +++ E L E +
Sbjct: 314 YNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMK 373
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E+G+ + ++ ++ + + L V+ M ++ ++ F +
Sbjct: 374 ERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVE 433
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+K+ + I + P Q++Y +I+ +C A + +EM +G VV +++
Sbjct: 434 EALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALI 493
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+G++ +A+ + KM + P+ IYN L+ + + L + L EM +KV
Sbjct: 494 HGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQ 553
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
PDK YTT+I + R+ + K + GG D M+ + K + E V
Sbjct: 554 PDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMC 613
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAG 588
+ M+ G DE Y + ++ G
Sbjct: 614 MSSMRKVGCIPDEFTYTTLIDGYAKKG 640
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%)
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
D +C +V G ++ E +GC+PG V Y +I+ YCR + +
Sbjct: 276 DYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLG 335
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
EM+ KG VV Y +++ G+ + L+ +MK +G PNV IYN+++ + +
Sbjct: 336 EMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCR 395
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
+ Q + +M + PD V++ T+I+A+ R + + +K E
Sbjct: 396 SASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLRE 441
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 147/378 (38%), Gaps = 54/378 (14%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA-NT 173
P+ TL LI LV S + D + + E V+PDA+ + L++ + R A N
Sbjct: 484 PDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNL 543
Query: 174 LLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L+++ + + + + G+ + ++E M+ G D Y +++ Y K
Sbjct: 544 LVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCK 603
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
G + A+ RK+ P Y L D K G AL+F DM ++ +
Sbjct: 604 SGMMNE--AVMCMSSMRKVGCIP-DEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPN 660
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
YASLIC + +I AE LF + +G+ P V VL
Sbjct: 661 IVTYASLICGYCNIGNTDSAEVLFASMQSEGLF--PNVVHYTVL---------------- 702
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY--CR 411
I + F K + AA +E ++ C P T ++N CR
Sbjct: 703 ----------------IGSLFKKDKAIQAAA-YFEHMLLNHCSPNDATMHYLVNGLTNCR 745
Query: 412 IALYS-------KAEK------VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA 458
+ + +A K VF + G D + AY++++ + + AM L
Sbjct: 746 YGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKE 805
Query: 459 KMKAKGCEPNVWIYNSLM 476
KM KGC P+ + SL+
Sbjct: 806 KMSNKGCLPDPVTFLSLL 823
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 155/402 (38%), Gaps = 69/402 (17%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
PD + +HG++ Q E A++ + P+ + +LI L + + +
Sbjct: 483 TPDVVTLGALIHGLVVSGQVDEALMVREKMAER--QVMPDANIYNVLISGLCKKRMLSAA 540
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGG 195
+L + V PD + L+ +R+ K A + + G ++A+N+ + G
Sbjct: 541 KNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKG 600
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
Y K M ++ M+ G + D Y +++ Y K GD +
Sbjct: 601 YCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKA---------------- 644
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
AL+F DM ++ + YASLIC + +I AE
Sbjct: 645 ----------------------ALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEV 682
Query: 316 LFKEAEEKGMLRDPEVCLKLVLM--------------YIEEGLVEKTLDVVESMKNAKLK 361
LF + +G+ P V VL+ Y E L+ +M
Sbjct: 683 LFASMQSEGLF--PNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNG 740
Query: 362 ISDC------ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+++C +C+ + K+ A + V++ LIS G P Y +II + CR +
Sbjct: 741 LTNCRYGMINSNCSDTDQAHKKS---ALLDVFKGLISDGLDPRISAYNAIIFSLCRHNML 797
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMY---GKTGRIRDAM 454
KA ++ +M KG V + S++ + GK+G+ R A+
Sbjct: 798 GKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRSAL 839
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 2/248 (0%)
Query: 272 SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
SG+ EAL M E+ ++ D +IY LI + A+ L E E+ + D V
Sbjct: 499 SGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFV 558
Query: 332 CLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQL 390
L+ +I + + E M+ K D ++ A++ G+ K AV +
Sbjct: 559 YTTLIDGFIRSDKLSDARKIFEFMEE-KGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSM 617
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
GCIP + TY ++I+ Y + A + +M ++ +V Y+S++ Y G
Sbjct: 618 RKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNT 677
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTV 510
A L A M+++G PNV Y L+ + Q ++ M +P+ + +
Sbjct: 678 DSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYL 737
Query: 511 ISAYNRAR 518
++ R
Sbjct: 738 VNGLTNCR 745
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 37/184 (20%)
Query: 418 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKT--GRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
A +++ EM + + YS+ V + G GR+ + L+ +GC P YN L
Sbjct: 258 ARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVL 317
Query: 476 MDMH-----------------------------------GRAKNLRQVEKLWKEMERRKV 500
+D + GR +L ++E L EM+ R +
Sbjct: 318 IDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGL 377
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
+P+ Y TVI A + R + N+ + D ++ F + +EE +K
Sbjct: 378 SPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALK 437
Query: 561 LLQD 564
LL++
Sbjct: 438 LLRE 441
>gi|297736717|emb|CBI25753.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 156/330 (47%), Gaps = 29/330 (8%)
Query: 179 ITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSE 238
+T+ E ALLAF G + K ++K + V+ Y ++ + K + +
Sbjct: 153 MTNPETALLAF----GFFRK------------RLKPSREVI---LYNVTLKVFRKCRNLD 193
Query: 239 KVAALFLECKSR--KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+ LF E R K D+ FST + SL +A+++F M E G D
Sbjct: 194 RAEKLFDEMLERGVKPDNITFSTIISCARVSSLPN-----KAVEWFEKMPEFGCHPDDVT 248
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
Y+++I ++ V +A +L+ A + DP L+ +Y G + L+V E MK
Sbjct: 249 YSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMK 308
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+K + I +++ + + W A +Y+++ + G P TYA+++ AY R
Sbjct: 309 ALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAE 368
Query: 417 KAEKVFIEMQQKGFDKCVV---AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
A V+ EM++KG C+ +SS++ +Y +G++ +A ++ M G EPN+++
Sbjct: 369 DALIVYKEMKEKGSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLT 428
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
SL+ +G+A +V + + + +TPD
Sbjct: 429 SLIQCYGKANRTDEVVRTFDRLLELDITPD 458
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 116/231 (50%), Gaps = 10/231 (4%)
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
E L ++ L+ +K + S ISCA V+ + AV+ +E++ GC P VT
Sbjct: 196 EKLFDEMLE--RGVKPDNITFSTIISCARVSSLPNK-----AVEWFEKMPEFGCHPDDVT 248
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y+++I+AY R A K++ + + + V +S+++ +YG +G + + +MK
Sbjct: 249 YSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMK 308
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
A G +PN+ IYN+L+D GRAK Q + ++KEM + P +Y ++ AY RAR +
Sbjct: 309 ALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAE 368
Query: 522 MCVKFYNEFRMNGG---VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ Y E + G + D ++ ++S ++ E +L M G
Sbjct: 369 DALIVYKEMKEKGSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAG 419
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 134/299 (44%), Gaps = 6/299 (2%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLI-CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLV 336
A K F +M E+G+ D ++++I C+ S K A E F++ E G D ++
Sbjct: 195 AEKLFDEMLERGVKPDNITFSTIISCARVSSLPNK-AVEWFEKMPEFGCHPDDVTYSAMI 253
Query: 337 LMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCI 396
Y G V+ L + + + K +I ++ + + + VYE++ + G
Sbjct: 254 DAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVK 313
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P V Y ++++A R +A+ ++ EM G Y++++ YG+ DA+ +
Sbjct: 314 PNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIV 373
Query: 457 VAKMKAKG---CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+MK KG C P+ W ++SL+ ++ + + + E + M P+ T++I
Sbjct: 374 YKEMKEKGSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQC 433
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
Y +A D V+ ++ D G M+ V ++ S EEL KL+ + KL
Sbjct: 434 YGKANRTDEVVRTFDRLLELDITPDDRFCGCMLNVMTQ-SPKEELGKLIDCIDKANPKL 491
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%)
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+AEK+F EM ++G + +S++++ + A+ KM GC P+ Y++++
Sbjct: 194 RAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMI 253
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
D +GRA N+ KL+ K D V+++T+I Y + FD C+ Y E + G
Sbjct: 254 DAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVK 313
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA 583
+ I ++ + + + + ++M + G + Y + + A
Sbjct: 314 PNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRA 360
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
V+ Y+ + ++ K + A L +M +G +P+ +++++ R +L W
Sbjct: 176 VILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISC-ARVSSLPNKAVEWF 234
Query: 494 E-MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
E M PD V+Y+ +I AY RA DM +K Y+ R ID ++ ++
Sbjct: 235 EKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMS 294
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ + + ++MK+ G K + +Y++ ++A+ A QA+
Sbjct: 295 GNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAK 336
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 148/301 (49%), Gaps = 6/301 (1%)
Query: 273 GRAFEALKFFRDMKEKG-ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
GR AL R+M+E+G I + Y ++I + + V A ++F E KG ++ PE
Sbjct: 86 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK-PEA 144
Query: 332 CL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG-FSKRRGYWAAVKVYE 388
+ L+ Y ++G ++ L + M + ++ +V+ F RG A ++ E
Sbjct: 145 VMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG-TEAYELVE 203
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ +G P TY +IN +C+ KA ++F M ++G VV Y+S++ K G
Sbjct: 204 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKG 263
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
++++ L + +G P++ +YN+L++ H + N+ + ++ EME++++ PD V+Y
Sbjct: 264 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 323
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
T++ D K +E G D ++ +S +++ +++ +M ++
Sbjct: 324 TLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK 383
Query: 569 G 569
G
Sbjct: 384 G 384
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 160/371 (43%), Gaps = 44/371 (11%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA--FNSAMGGYNKLHMYYS 204
+ P+ +T +++ + + A + +T GE+ A +N+ +GGY +
Sbjct: 103 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 162
Query: 205 TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKI 264
+L ++M G+ + Y ++ A + G + L E + L F+ Y I
Sbjct: 163 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT---YNI 219
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L + K G +AL+ F +M +G+ Y SLI + + +V+ ++LF EA +G
Sbjct: 220 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRG 279
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ D + L+ + G +++ +++ M+ ++
Sbjct: 280 IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA----------------------- 316
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
P VTY +++ C + +A K+ EM ++G +V Y+++++ Y
Sbjct: 317 ------------PDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGY 364
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR--QVEKLWKEMERRKVTP 502
G ++DA+ + +M KG P + YN+L+ G KN + E + KEM +TP
Sbjct: 365 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALI--QGLCKNGQGDDAENMVKEMVENGITP 422
Query: 503 DKVSYTTVISA 513
D +Y ++I
Sbjct: 423 DDSTYISLIEG 433
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 94/240 (39%), Gaps = 43/240 (17%)
Query: 389 QLISQGCIPGQVTYASI------------------------------------INAYCRI 412
+L+ Q P VTY ++ I+ +C++
Sbjct: 62 ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 121
Query: 413 ALYSKAEKVFIEMQQKGFDKC-VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+A KVF EM KG K V Y++++ Y G++ A+ +M +G V
Sbjct: 122 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 181
Query: 472 YNSLMD---MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
YN L+ M GR + +L +EM + + PD +Y +I+ + + ++ +
Sbjct: 182 YNLLVHALFMDGRGT---EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 238
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G ++ SK Q++E KL + G + D LY++ +N+ +G
Sbjct: 239 NMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 298
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 117/304 (38%), Gaps = 27/304 (8%)
Query: 27 YRHTLFSTCKAFPFVTVNPSSIINHRFFQVNASTNFPTIELNRDSHHQTAVPDAKKFDSF 86
YR + A T N ++ H F T EL + + PD ++
Sbjct: 166 YRDRMVERGVAMTVATYN---LLVHALFMDGRGTE--AYELVEEMGGKGLAPDVFTYNIL 220
Query: 87 LHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ-------SKKWDSIV-- 137
++G K+ ++ + N +++ R T LI L + K +D V
Sbjct: 221 INGHCKEGNVKKALEIFENMSRR--GVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 278
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
+ D +YN L ++H+ S + R F+I + + I ++ +N+ M G
Sbjct: 279 GIRPDLVLYNALINSHSTSGNID-----RAFEIMGEMEKKRIAPDDVT---YNTLMRGLC 330
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
L + ++M GI D Y ++ Y GD + + E ++ + T
Sbjct: 331 LLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 390
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ Y L L K+G+ +A ++M E GI D S Y SLI + E + +E
Sbjct: 391 T---YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAIDDERL 447
Query: 318 KEAE 321
A+
Sbjct: 448 AAAD 451
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 148/301 (49%), Gaps = 6/301 (1%)
Query: 273 GRAFEALKFFRDMKEKG-ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
GR AL R+M+E+G I + Y ++I + + V A ++F E KG ++ PE
Sbjct: 533 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK-PEA 591
Query: 332 CL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG-FSKRRGYWAAVKVYE 388
+ L+ Y ++G ++ L + M + ++ +V+ F RG A ++ E
Sbjct: 592 VMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT-EAYELVE 650
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ +G P TY +IN +C+ KA ++F M ++G VV Y++++ K G
Sbjct: 651 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKG 710
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
++++ L + +G P++ +YN+L++ H + N+ + ++ EME++++ PD V+Y
Sbjct: 711 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 770
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
T++ D K +E G D ++ +S +++ +++ +M ++
Sbjct: 771 TLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK 830
Query: 569 G 569
G
Sbjct: 831 G 831
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 161/377 (42%), Gaps = 44/377 (11%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA--FNSAMGGYNKLHMYYS 204
+ P+ +T +++ + + A + +T GE+ A +N+ +GGY +
Sbjct: 550 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 609
Query: 205 TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKI 264
+L ++M G+ + Y ++ A + G + L E + L F+ Y I
Sbjct: 610 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT---YNI 666
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L + K G +AL+ F +M +G+ Y +LI + + +V+ ++LF EA +G
Sbjct: 667 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG 726
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ D + L+ + G +++ +++ M+ ++
Sbjct: 727 IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA----------------------- 763
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
P VTY +++ C + +A K+ EM ++G +V Y+++++ Y
Sbjct: 764 ------------PDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 811
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR--QVEKLWKEMERRKVTP 502
G ++DA+ + +M KG P + YN+L+ G KN + E + KEM +TP
Sbjct: 812 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALI--QGLCKNGQGDDAENMVKEMVENGITP 869
Query: 503 DKVSYTTVISAYNRARE 519
D +Y ++I E
Sbjct: 870 DDSTYISLIEGLTTEDE 886
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 94/240 (39%), Gaps = 43/240 (17%)
Query: 389 QLISQGCIPGQVTYASI------------------------------------INAYCRI 412
+L+ Q P VTY ++ I+ +C++
Sbjct: 509 ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 568
Query: 413 ALYSKAEKVFIEMQQKGFDKC-VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+A KVF EM KG K V Y++++ Y G++ A+ +M +G V
Sbjct: 569 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 628
Query: 472 YNSLMD---MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
YN L+ M GR + +L +EM + + PD +Y +I+ + + ++ +
Sbjct: 629 YNLLVHALFMDGRGT---EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 685
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G ++ SK Q++E KL + G + D LY++ +N+ +G
Sbjct: 686 NMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 745
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 11/184 (5%)
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
+ D +YN L ++H+ S + R F+I + + I ++ +N+ M G
Sbjct: 726 GIRPDLVLYNALINSHSTSGNID-----RAFEIMGEMEKKRIAPDDVT---YNTLMRGLC 777
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
L + ++M GI D Y ++ Y GD + + E ++ + T
Sbjct: 778 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 837
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ Y L L K+G+ +A ++M E GI D S Y SLI + E + +E
Sbjct: 838 T---YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAIDDERL 894
Query: 318 KEAE 321
A+
Sbjct: 895 AAAD 898
>gi|410110069|gb|AFV61114.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
lycioides]
Length = 429
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 165/351 (47%), Gaps = 7/351 (1%)
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 1 EMRQRALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 57
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ + A +F + G D ++ ++ + L + ++ M+ A + +
Sbjct: 58 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA 117
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEM 425
++ + + + + A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M
Sbjct: 118 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 177
Query: 426 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNL 485
++ G + VV+Y++++ +YG +A+ L M+ K NV YNS+M ++G+
Sbjct: 178 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEH 237
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ + M
Sbjct: 238 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 297
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ + + + +LL ++KS D +A++ L AG +A ++
Sbjct: 298 IVAYERAGLVAHAKRLLHELKSP----DNIPRDTAIHILAGAGRIEEATYV 344
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 169/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F+ + Y + +
Sbjct: 35 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKRSGFTPDLVAYNAMIN 89
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +M+ G++ + + Y++L+ + + A +F E E L
Sbjct: 90 VFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLL 149
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 150 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 209
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 210 RLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV 269
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + +Y +++ + RA + ++L E++ +PD +
Sbjct: 270 GKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----SPDNIPR 325
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ +FSK + +V++ M+
Sbjct: 326 DTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRG 385
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 386 LGYFPDSNVIALVLNA 401
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 164/353 (46%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG++ ++ Y ++ Y + + ++F
Sbjct: 81 LVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFS 140
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 141 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 195
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K ++++ ++++Y + EK ++++ M+N ++ +
Sbjct: 196 YGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 255
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 256 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLH 315
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+ K D + + + + GRI +A ++ + G ++ ++ ++ + + K
Sbjct: 316 EL--KSPDN--IPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYK 371
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + EFD Y E + G V
Sbjct: 372 KYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVGCV 424
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 142/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 114 PNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 173
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ IV + Y +M Y K
Sbjct: 174 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGK 233
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 234 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 290
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + ++I G +E+ V
Sbjct: 291 QVLYQTMIVAYERAGLVAHAKRLLHE------LKSPDNIPRDTAIHILAGAGRIEEATYV 344
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y V+V++++ G P A ++NAY +
Sbjct: 345 FRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGK 404
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 405 LHEFDKANGVYMEMQEVG 422
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 200/484 (41%), Gaps = 85/484 (17%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYST 205
N+ P+ T S L+ + K ++A +LQ + ++ F+S + GY K M
Sbjct: 456 NLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKA 515
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ V +M ++ ++ Y +++ Y+K G+ + E KSR+L+ S ++ IL
Sbjct: 516 VDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEE---SNVIFDIL 572
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK-- 323
++L + GR EA DM KGI D YASLI + A + +E +EK
Sbjct: 573 LNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNI 632
Query: 324 ------------GMLR----DPE-VCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
G+LR DP VC ++ IE GL DCI
Sbjct: 633 RFDVVAYNALIKGLLRLGKYDPRYVCSRM----IELGLA-----------------PDCI 671
Query: 367 S-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL----------- 414
+ I+N + + A+ + ++ S G +P VTY +I C+
Sbjct: 672 TYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLV 731
Query: 415 --YSKAEK-----------------------VFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
YS++EK V EM ++G +V Y++++ Y
Sbjct: 732 KAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSH 791
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRA----KNLRQVEKLWKEMERRKVTPDKV 505
+ A+ ++M G PN+ YN+L+ A + + + EKL EM R + P+
Sbjct: 792 VEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAA 851
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y ++S Y R + + E G V +++ ++K ++ E +LL D+
Sbjct: 852 TYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDL 911
Query: 566 KSEG 569
++G
Sbjct: 912 LTKG 915
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 118/583 (20%), Positives = 229/583 (39%), Gaps = 55/583 (9%)
Query: 32 FSTCKAFPFVTVNPSSIINHRFFQVNASTNFPTIELN-RDSHHQTAVPDAKKFDSFLHGM 90
FS +A V P N +Q NAS ++L D VPD + +H +
Sbjct: 82 FSHMRALGLVPTLP--FWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSL 139
Query: 91 LKDPQTQ-ELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVL 149
K L Y N+ + + T +I Q D L + +
Sbjct: 140 CKVGDLDLALGYLRNNDVVDI-----DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLC 194
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFNSAMGGYNKLHMYYSTIL 207
D+ TC+ LV R + A ++ + DG + ++ N+ + GY + +
Sbjct: 195 FDSITCNILVKGYCRIGLVQYAEWVMYNLV-DGGVTKDVIGLNTLIDGYCEAVLMSQATE 253
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+ E + + +D Y +++A+ K GD + +LF
Sbjct: 254 LIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLF----------------------- 290
Query: 268 SLGKSGRAFEALKFFRD---MKEKGILEDPSI---------YASLICSFASITEVKLAEE 315
E L F++D +K ++ I Y +LI ++ V+ +
Sbjct: 291 --------NEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHS 342
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L+K+ G++ D C ++ + G + + + M L + I+N
Sbjct: 343 LYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLF 402
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVV 435
K A + Q++ +G VT ++++ ++ +AE+VF + + V
Sbjct: 403 KSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCV 462
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
YS+++ Y K G++ A ++ KM+ + PNV ++S+++ + + L + + +EM
Sbjct: 463 TYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREM 522
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+R V P+ + Y +I Y +A E D+ F E + I I++ ++ ++
Sbjct: 523 VQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRM 582
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+E L+ DM S+G D Y S ++ G Q+ A + Q
Sbjct: 583 DEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQ 625
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 196/471 (41%), Gaps = 55/471 (11%)
Query: 167 KFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQ 226
+ K + + Q I + + L+ + + + Y K + +Y+KM GI+ D
Sbjct: 302 RLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSS 361
Query: 227 IMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMK 286
I+ + + G + A LF E LD S Y + +SL KSGR EA M
Sbjct: 362 ILYGFCRHGKLTEAAVLFREMYEMGLDPNHVS---YATIINSLFKSGRVMEAFNLQSQMV 418
Query: 287 EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE 346
+GI D +++ + + K AEE+F+ + + + L+ Y + G +E
Sbjct: 419 VRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKME 478
Query: 347 KTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII 406
V++ M+ + + +I+NG++K+ AV V +++ + +P + YA +I
Sbjct: 479 LAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILI 538
Query: 407 NAY------------C-----------------------RIALYSKAEKVFIEMQQKGFD 431
+ Y C R+ +A + I+M KG D
Sbjct: 539 DGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGID 598
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEK- 490
+V Y+S++ Y K G A+ +V +MK K +V YN+L+ K L ++ K
Sbjct: 599 PDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALI------KGLLRLGKY 652
Query: 491 ----LWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ M + PD ++Y T+I+ Y + + + NE + G + + I++
Sbjct: 653 DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILI 712
Query: 547 GVFSKLSQIEELV--KLLQDMKSEGTKLDERL-YHSAMNALRDAGLQMQAQ 594
G K + + K L S K D+ L H + A +GL+++ Q
Sbjct: 713 GGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVA---SGLELKRQ 760
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 177/430 (41%), Gaps = 38/430 (8%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTL--KL 122
+++ R+ + +P+ + + G K + Q++A D+ E K R E+S + +
Sbjct: 516 VDVLREMVQRNVMPNTIVYAILIDGYFKAGE-QDVADDFCKEMKSR---RLEESNVIFDI 571
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT-- 180
L+ L + + D SL D + PD + L+ FK N L + I
Sbjct: 572 LLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDG-----YFKEGNQLAALSIVQE 626
Query: 181 ----DGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
+ ++A+N+ + G +L Y V +M G+ D Y I+ Y G
Sbjct: 627 MKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTIINTYCIKGK 685
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG-------RAFEALKFFRDMKEKG 289
+E + E KS + + Y IL L K+G F + R K
Sbjct: 686 TEDALDILNEMKSYGIMPNAVT---YNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADK 742
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
IL+ I+ L+ AS E+K + + E ++G+ D L+ Y VEK L
Sbjct: 743 ILQ---IHEKLV---ASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKAL 796
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ----GCIPGQVTYASI 405
M + + ++ G S ++ E+L+S+ G +P TY +
Sbjct: 797 KTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDIL 856
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
++ Y R+ K + IEM KGF + Y+ +++ Y K+G++ +A L+ + KG
Sbjct: 857 VSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGR 916
Query: 466 EPNVWIYNSL 475
PN + Y+ L
Sbjct: 917 IPNSFTYDIL 926
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 150/365 (41%), Gaps = 25/365 (6%)
Query: 256 PFSTHMYKILCDSLGK----SGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVK 311
P TH+Y +L + R A F M+ G++ + +L+ F + V
Sbjct: 52 PTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVS 111
Query: 312 LAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIV 371
+ ++ + G++ D LV + G ++ L + + N + I + ++
Sbjct: 112 QVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNTVI 169
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
GF ++ + +++ +G +T ++ YCRI L AE V + G
Sbjct: 170 WGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVT 229
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
K V+ ++++ Y + + A L+ + ++ YN+L+ + +L + E L
Sbjct: 230 KDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESL 289
Query: 492 -------WKEMERRK------------VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
WK+ +R K + P V+YTT+I+AY + + Y + M
Sbjct: 290 FNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIM 349
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
NG + D ++ F + ++ E L ++M G + Y + +N+L +G M+
Sbjct: 350 NGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVME 409
Query: 593 AQWLQ 597
A LQ
Sbjct: 410 AFNLQ 414
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 155/390 (39%), Gaps = 33/390 (8%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIG--DSEKVAAL 243
++ + S + GY K + + + ++MK I D Y +++ ++G D V +
Sbjct: 601 IVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSR 660
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
+E L P Y + ++ G+ +AL +MK GI+ + Y LI
Sbjct: 661 MIE-----LGLAP-DCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGG 714
Query: 304 F--ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD------VVESM 355
+ + +A + D ++ I E LV L+ V++ M
Sbjct: 715 LCKTGFVPTPITHKFLVKAYSRSEKADK-------ILQIHEKLVASGLELKRQKVVLDEM 767
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASII----NAYCR 411
+ A++ G+ A+K Y Q+ G P TY +++ NA
Sbjct: 768 VKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLM 827
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+ + EK+ EM ++G Y +V+ YG+ G + + L +M KG P +
Sbjct: 828 EEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKT 887
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY---NRAREFDMCVKFYN 528
YN L+ + ++ + + +L ++ + P+ +Y + + + E D +K
Sbjct: 888 YNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSY 947
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
E + +I+ G+ FSK ++I L
Sbjct: 948 EIEVKKLLIEMGRKGLK---FSKKAEIRRL 974
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 148/301 (49%), Gaps = 6/301 (1%)
Query: 273 GRAFEALKFFRDMKEKG-ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV 331
GR AL R+M+E+G I + Y ++I + + V A ++F E KG ++ PE
Sbjct: 528 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK-PEA 586
Query: 332 CL--KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNG-FSKRRGYWAAVKVYE 388
+ L+ Y ++G ++ L + M + ++ +V+ F RG A ++ E
Sbjct: 587 VMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT-EAYELVE 645
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ +G P TY +IN +C+ KA ++F M ++G VV Y++++ K G
Sbjct: 646 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKG 705
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
++++ L + +G P++ +YN+L++ H + N+ + ++ EME++++ PD V+Y
Sbjct: 706 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 765
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSE 568
T++ D K +E G D ++ +S +++ +++ +M ++
Sbjct: 766 TLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK 825
Query: 569 G 569
G
Sbjct: 826 G 826
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 161/377 (42%), Gaps = 44/377 (11%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA--FNSAMGGYNKLHMYYS 204
+ P+ +T +++ + + A + +T GE+ A +N+ +GGY +
Sbjct: 545 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 604
Query: 205 TILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKI 264
+L ++M G+ + Y ++ A + G + L E + L F+ Y I
Sbjct: 605 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT---YNI 661
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L + K G +AL+ F +M +G+ Y +LI + + +V+ ++LF EA +G
Sbjct: 662 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG 721
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
+ D + L+ + G +++ +++ M+ ++
Sbjct: 722 IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA----------------------- 758
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
P VTY +++ C + +A K+ EM ++G +V Y+++++ Y
Sbjct: 759 ------------PDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 806
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR--QVEKLWKEMERRKVTP 502
G ++DA+ + +M KG P + YN+L+ G KN + E + KEM +TP
Sbjct: 807 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALI--QGLCKNGQGDDAENMVKEMVENGITP 864
Query: 503 DKVSYTTVISAYNRARE 519
D +Y ++I E
Sbjct: 865 DDSTYISLIEGLTTEDE 881
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 94/240 (39%), Gaps = 43/240 (17%)
Query: 389 QLISQGCIPGQVTYASI------------------------------------INAYCRI 412
+L+ Q P VTY ++ I+ +C++
Sbjct: 504 ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 563
Query: 413 ALYSKAEKVFIEMQQKGFDKC-VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
+A KVF EM KG K V Y++++ Y G++ A+ +M +G V
Sbjct: 564 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 623
Query: 472 YNSLMD---MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
YN L+ M GR + +L +EM + + PD +Y +I+ + + ++ +
Sbjct: 624 YNLLVHALFMDGRGT---EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 680
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G ++ SK Q++E KL + G + D LY++ +N+ +G
Sbjct: 681 NMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 740
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 11/184 (5%)
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
+ D +YN L ++H+ S + R F+I + + I ++ +N+ M G
Sbjct: 721 GIRPDLVLYNALINSHSTSGNID-----RAFEIMGEMEKKRIAPDDVT---YNTLMRGLC 772
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
L + ++M GI D Y ++ Y GD + + E ++ + T
Sbjct: 773 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 832
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ Y L L K+G+ +A ++M E GI D S Y SLI + E + +E
Sbjct: 833 T---YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAIDDERL 889
Query: 318 KEAE 321
A+
Sbjct: 890 AAAD 893
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 182/439 (41%), Gaps = 5/439 (1%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
+ P TL L+ + V+L + PD T + LV + K A
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200
Query: 173 TLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAY 231
L++ + G + L+ + + + G K + + KM+ I D Y I++
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 232 YKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
K + LF + +++ + F+ Y L L GR +A + DM EK I
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFT---YNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 292 EDPSIYASLICSFASITEVKLAEELFKE-AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLD 350
D + +LI +F ++ AE+L+ E + K D L+ + + VE+ ++
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
V M L + +++GF + R A V++Q++S G P +TY +++ C
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
A VF MQ++ +V Y++M+ K G++ D L + KG +PNV
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
Y ++M R + + L+ EM+ P+ +Y T+I A R + + E
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Query: 531 RMNGGVIDRAIAGIMVGVF 549
R G D + G++ +
Sbjct: 558 RSCGFAGDASTFGLVTNML 576
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/492 (20%), Positives = 209/492 (42%), Gaps = 12/492 (2%)
Query: 114 RPEKSTLKL--LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIA 171
RP S ++ L+ + + K+D ++SL E + + + +T S + R + +A
Sbjct: 70 RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLA 129
Query: 172 NTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+L + G +++ NS + G+ + + + ++M G D+ + ++
Sbjct: 130 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 189
Query: 231 YYKIGDSEKVAALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
++ + + AL + K + D Y + + L K G AL M++
Sbjct: 190 LFQHNKASEAVALVERMVVKGCQPDLVT-----YGAVINGLCKRGEPDLALNLLNKMEKG 244
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
I D IY ++I + A +LF + E KG+ D L+ G
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLI-SQGCIPGQVTYASIIN 407
++ M + A+++ F K A K+Y++++ S+ C P V Y ++I
Sbjct: 305 SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
+C+ + +VF EM Q+G V Y++++ + + +A + +M + G P
Sbjct: 365 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 424
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFY 527
++ YN L+D N+ +++ M++R + D V+YTT+I A +A + + +
Sbjct: 425 DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Query: 528 NEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNA-LRD 586
+ G + M+ F + EE L +MK +G + Y++ + A LRD
Sbjct: 485 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRD 544
Query: 587 AGLQMQAQWLQQ 598
A+ +++
Sbjct: 545 GDEAASAELIKE 556
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 168/411 (40%), Gaps = 11/411 (2%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS-CVRARKFKIA 171
++P+ T L+ L Q K V+L E + PD T ++ C R
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 172 NTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA- 230
N L ++ E ++ +N+ + G K ++ KM++ GI D Y ++
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 231 --YYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM-KE 287
Y + D+ ++ + LE K+ D F+ L D+ K G+ EA K + +M K
Sbjct: 296 CNYGRWSDASRLLSDMLE-KNINPDLVFFNA-----LIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
K D Y +LI F V+ E+F+E ++G++ + L+ + + +
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
V + M + + +++G A+ V+E + + VTY ++I
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIE 469
Query: 408 AYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEP 467
A C+ +F + KG VV Y++M++ + + G +A L +MK G P
Sbjct: 470 ALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLP 529
Query: 468 NVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAR 518
N YN+L+ R + +L KEM D ++ V + + R
Sbjct: 530 NSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGR 580
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 88/205 (42%), Gaps = 6/205 (2%)
Query: 383 AVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVA 442
A+ ++ ++ P V ++ +++A ++ + + +MQ G + YS +
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 443 MYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP 502
+ + ++ A+ ++ KM G P++ NSL++ + + L +M P
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 503 DKVSYTTVISA---YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
D V++TT++ +N+A E V + G D G ++ K + + +
Sbjct: 179 DTVTFTTLVHGLFQHNKASE---AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 560 KLLQDMKSEGTKLDERLYHSAMNAL 584
LL M+ + D +Y++ ++ L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGL 260
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 189/441 (42%), Gaps = 22/441 (4%)
Query: 156 SRLVASCVRARKFKIANTLLQVFITDGEIALLAFN---------SAMGGYNKLHMYYSTI 206
+R + +R + +A+ + + +LL F SA N L + +S +
Sbjct: 49 NRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNIN-LPLIHSLL 107
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
L M S G V D + + + E LF S+ D S Y I+
Sbjct: 108 L---DMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVS---YTIII 161
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
D+L + R EA K +R + +KG+ D +L+ S V LA EL + G+
Sbjct: 162 DALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVK 221
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW-AAVK 385
+ V L+ + G V+K + + M + D ++ I+ + G AV+
Sbjct: 222 VNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGC-VPDLVTYNILLNYCCEEGMVDEAVR 280
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE-MQQKGFDKC-VVAYSSMVAM 443
+ E + G P +Y ++ +C+ + +A + +E MQ KG C VV+Y++++
Sbjct: 281 LVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGM--CDVVSYNTVITA 338
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+ K R R L +M KG P++ +N L+D R + V+KL EM + +V PD
Sbjct: 339 FCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPD 398
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+ YT V+ + + D+ + + NG D ++ F K S++ + + L
Sbjct: 399 CIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFD 458
Query: 564 DMKSEGTKLDERLYHSAMNAL 584
+M+S+G DE Y + L
Sbjct: 459 EMQSKGLYPDEVTYKLIVGGL 479
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/458 (18%), Positives = 183/458 (39%), Gaps = 44/458 (9%)
Query: 59 STNFPTIE-LNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEK 117
+ N P I L D VPD F+++L+ + + + + +++ K + P+
Sbjct: 97 NINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRD--PDV 154
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
+ ++I L +K++D + + PD C LV + +A L+
Sbjct: 155 VSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVG 214
Query: 178 FITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
I G ++ L +N+ + G+ ++ V + MK + +GC ++
Sbjct: 215 VIKGGVKVNSLVYNALIDGFCRMGR------VDKAMKIKAFMSRTGCVPDLVT------- 261
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
Y IL + + G EA++ M+ G+ D
Sbjct: 262 -------------------------YNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYS 296
Query: 297 YASLICSFASITEVKLAEELFKE-AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM 355
Y L+ F V A + E + KGM D ++ + + K ++ E M
Sbjct: 297 YNELLKGFCKANMVDRAHLMMVERMQTKGMC-DVVSYNTVITAFCKARRTRKGYELFEEM 355
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
++ +++ F + K+ +++ +P + Y ++++ C+
Sbjct: 356 CGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKV 415
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
A VF +M + G + V++Y++++ + KT R+ DAM L +M++KG P+ Y +
Sbjct: 416 DVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLI 475
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ R K + ++W +M R T ++ T+++A
Sbjct: 476 VGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNA 513
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 130/288 (45%), Gaps = 4/288 (1%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
+Y L D + GR +A+K M G + D Y L+ V A L +
Sbjct: 226 VYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETM 285
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKT-LDVVESMKNAKLKISDCIS-CAIVNGFSKRR 378
E G+ D +L+ + + +V++ L +VE M+ + D +S ++ F K R
Sbjct: 286 ERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGM--CDVVSYNTVITAFCKAR 343
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
+++E++ +G P VT+ +I+A+ R +K+ EM + + Y+
Sbjct: 344 RTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYT 403
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
++V K G++ A + M G P+V YN+L++ + + L+ EM+ +
Sbjct: 404 AVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSK 463
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ PD+V+Y ++ R ++ + + +++ G ++R ++ +V
Sbjct: 464 GLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLV 511
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 94/218 (43%), Gaps = 5/218 (2%)
Query: 388 EQLISQGCIPGQVTYASIINAYC----RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
+I +G TY+ I+A C I L + ++M GF + A+++ + +
Sbjct: 70 RHVIPRGFSLLPFTYSRFISALCSAPNNINL-PLIHSLLLDMDSLGFVPDIWAFNTYLNL 128
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+ R+ A+ L M +KG +P+V Y ++D AK + K+W+ + + ++PD
Sbjct: 129 LCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPD 188
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
+ ++ D+ + G ++ + ++ F ++ ++++ +K+
Sbjct: 189 YKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKA 248
Query: 564 DMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
M G D Y+ +N + G+ +A L + E
Sbjct: 249 FMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETME 286
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 195/435 (44%), Gaps = 28/435 (6%)
Query: 164 RARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLD--- 220
R+ F + N L+ + T + +FN+ +G K+ Y+ I +Y++M G+ D
Sbjct: 73 RSEAFSVFNHLIDMQPTP---PISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFIT 129
Query: 221 ----SGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAF 276
CYC + + + + A L + +T T + K LC LG R
Sbjct: 130 LNILINCYCNLNKVDFGL------AVLGEMLRRGHSPNTVTFTSLVKGLC--LGS--RIS 179
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFA----SITEVKLAEELFKEAEEKGMLRDPE-V 331
EA R M G + Y +L+ ++ VKL EE+ G+ P V
Sbjct: 180 EATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLV 239
Query: 332 CLKLVLMYI-EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK-VYEQ 389
C ++ + ++GL++K ++ MK + +I++G G W K ++ +
Sbjct: 240 CYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMC-HTGRWEGAKGLFNE 298
Query: 390 LISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 449
++ +G P VT+ +I+A C+ +A + M Q+G Y++++ + GR
Sbjct: 299 MVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGR 358
Query: 450 IRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTT 509
I DA L M++KG E + YN L++ + ++ + + +KL++EM +++ P ++Y T
Sbjct: 359 IDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNT 418
Query: 510 VISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+++ R + + E +++ + I++ K + + E ++L +++
Sbjct: 419 LLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHD 478
Query: 570 TKLDERLYHSAMNAL 584
+ ++++ ++ L
Sbjct: 479 FQPSIQIFNCLIDGL 493
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 111/545 (20%), Positives = 220/545 (40%), Gaps = 19/545 (3%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQEL-AYDYYNEAKKLPEFRPEKSTLKLL 123
I L +D+ + PD + ++FL K + A+ +N + + P S+ L
Sbjct: 42 ISLTKDT--VSNAPDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDM-QPTPPISSFNTL 98
Query: 124 IRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGE 183
+ + + K++ ++SL + + + PD T + L+ K +L + G
Sbjct: 99 LGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGH 158
Query: 184 IA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAA 242
+ F S + G + KM G + Y ++ G++
Sbjct: 159 SPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVK 218
Query: 243 LFLECKSRKLDSTPFSTHM------YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
L E + + F + Y + DSL K G + + F +MK +GI D
Sbjct: 219 LHEEMLN---GNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVA 275
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVES 354
Y+S+I + A+ LF E ++G+ P V VL+ + G +E+ +++
Sbjct: 276 YSSIIHGMCHTGRWEGAKGLFNEMVDEGV--HPNVVTFNVLIDALCKAGKMEEANHLLKL 333
Query: 355 MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
M +++GF A ++ + S+G V+Y +IN YC+
Sbjct: 334 MIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGR 393
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
+A+K++ EM K V+ Y++++ + G++RDA L +MK P YN
Sbjct: 394 MVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNI 453
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
L+D + +L + +L+ +E P + +I +AR+ ++ + +N G
Sbjct: 454 LLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEG 513
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL-RDAGLQMQA 593
+ +M+ K Q+E L M+ +G + +++ M ++ +Q
Sbjct: 514 LEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVV 573
Query: 594 QWLQQ 598
+ LQ+
Sbjct: 574 ELLQE 578
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/411 (19%), Positives = 166/411 (40%), Gaps = 82/411 (19%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ +I + + +W+ L + V P+ T + L+ + +A K + AN L
Sbjct: 271 PDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHL 330
Query: 175 LQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
L++ I GE D+ Y +++ +
Sbjct: 331 LKLMIQRGESP----------------------------------DTFTYNTLIDGFCLE 356
Query: 235 GDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDP 294
G + LF+ +S+ +++ S Y +L + KSGR EA K +R+M K I+
Sbjct: 357 GRIDDARDLFVSMESKGIETDAVS---YNVLINGYCKSGRMVEAKKLYREMMCKEIMPTV 413
Query: 295 SIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL-----VEKTL 349
Y +L+ +V+ A LF E + + PE C +L+ +GL + + +
Sbjct: 414 ITYNTLLTGLFREGKVRDAWNLFGEMKVHDL--TPESCTYNILL---DGLCKNNHLSEAM 468
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
++ ++N + S I +++G K R A +++ +L +G P +TY +I+
Sbjct: 469 ELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGL 528
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
C+ A+ +F+ M++K GC PN+
Sbjct: 529 CKSGQLENAKDLFLGMEEK-----------------------------------GCAPNL 553
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+N+LM + +++V +L +EM + +PD + + V+ ++ ++
Sbjct: 554 VTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKY 604
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 147/320 (45%), Gaps = 44/320 (13%)
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPS--IYASLICSFASIT 308
K+++ S + +C G+ R F++L+ F MK+ DPS Y +++
Sbjct: 78 KIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDC--DPSQKAYVTVLAILVEEN 135
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
++ LA + +K E G+ P V A L +
Sbjct: 136 QLNLAFKFYKNMREIGL--PPTV--------------------------ASLNV------ 161
Query: 369 AIVNGFSKRRGYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++ + G A +K++ ++ +GC P TY ++I+ CR +A+K+F EM +
Sbjct: 162 -LIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVE 220
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR- 486
K VV Y+S++ + + +AM + +MK+KG EPNV+ Y+SLMD G K+ R
Sbjct: 221 KDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD--GLCKDGRS 278
Query: 487 -QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
Q +L++ M R P+ V+YTT+I+ + ++ V+ + + G D + G +
Sbjct: 279 LQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKV 338
Query: 546 VGVFSKLSQIEELVKLLQDM 565
+ F +S+ E L +M
Sbjct: 339 ISGFCAISKFREAANFLDEM 358
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/428 (19%), Positives = 175/428 (40%), Gaps = 48/428 (11%)
Query: 151 DAHTCSRLVASCVRARKFKIANTLL-QVFITDGEIALLAFNSAMGGYNKLHMYYSTILVY 209
D + +V V A KFK A L+ ++ I + ++ S GY ++H + ++ V+
Sbjct: 50 DQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVF 109
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSL 269
KMK Y ++ + ++ F K+ + P + +L +L
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILV---EENQLNLAFKFYKNMREIGLPPTVASLNVLIKAL 166
Query: 270 GKSGRAFEA-LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
++ +A LK F +M ++G D Y +LI + A++LF E EK
Sbjct: 167 CRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD---- 222
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
C V+ Y +++NG + A++ E
Sbjct: 223 ---CAPTVVTYT----------------------------SLINGLCGSKNVDEAMRYLE 251
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ S+G P TY+S+++ C+ +A ++F M +G +V Y++++ K
Sbjct: 252 EMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQ 311
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+I++A+ L+ +M +G +P+ +Y ++ R+ EM +TP+++++
Sbjct: 312 KIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWN 371
Query: 509 TVISAYNRAREFDMCVKF-------YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
+ N +C + Y R G ++ +V K + ++ V+L
Sbjct: 372 IHVKTSNEVVR-GLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQL 430
Query: 562 LQDMKSEG 569
+ ++ ++G
Sbjct: 431 VDEIVTDG 438
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 106/248 (42%), Gaps = 36/248 (14%)
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
D++ MK +S+ I +I G+ + + +++V+ ++ C P Q Y +++
Sbjct: 72 DLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 131
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+ A K + M++ G V + + ++ A+ G + + + +M +GC+P+
Sbjct: 132 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPD 191
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ Y +L+ R + + +KL+ EM + P V+YT++I+ ++ D
Sbjct: 192 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD------- 244
Query: 529 EFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
E ++ L++MKS+G + + Y S M+ L G
Sbjct: 245 ----------------------------EAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDG 276
Query: 589 LQMQAQWL 596
+QA L
Sbjct: 277 RSLQAMEL 284
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 141/343 (41%), Gaps = 23/343 (6%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSK-KWDSI 136
P K + + L ++++ Q LA+ +Y +++ P ++L +LI+ L ++ D+
Sbjct: 119 PSQKAYVTVLAILVEENQLN-LAFKFYKNMREIG-LPPTVASLNVLIKALCRNDGTVDAG 176
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFI-TDGEIALLAFNSAMGG 195
+ + + PD++T L++ R + A L + D ++ + S + G
Sbjct: 177 LKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
+ E+MKS GI + Y +M+ K G S + LF +R
Sbjct: 237 LCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
+ Y L L K + EA++ M +G+ D +Y +I F +I++ + A
Sbjct: 297 MVT---YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAAN 353
Query: 316 LFKEAEEKGMLRD-----------PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISD 364
E G+ + EV L Y + + SM++ + +
Sbjct: 354 FLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANY-----PSRAFTLYLSMRSRGISVEV 408
Query: 365 CISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
++V K+ + AV++ +++++ GCIP + T+ +I
Sbjct: 409 ETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIG 451
>gi|356522073|ref|XP_003529674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 685
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 119/235 (50%), Gaps = 14/235 (5%)
Query: 347 KTLDVVESMKNAKLK---------ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
K LD +E + + L+ S ISCA + + AV+ +E++ S GC P
Sbjct: 176 KDLDAMEKLFDEMLQRGVRPDNVTFSTIISCARICSLPNK-----AVEWFEKMSSFGCEP 230
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
VTY+++I+AY R A +++ + + + V +S+++ MYG G + +
Sbjct: 231 DDVTYSAMIDAYGRAGNIDMALRLYDRARTEKWRLDTVTFSTLIKMYGLAGNYDGCLNVY 290
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+MK G +PN+ IYN+L+D GRAK Q + ++ EM +P+ V+Y +++ AY R
Sbjct: 291 QEMKVLGVKPNMVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFSPNWVTYASLLRAYGRG 350
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKL 572
R + + Y E + G ++ + ++ + + L E ++ +DMK+ T L
Sbjct: 351 RYSEDALFVYKEMKEKGMEMNTHLYNTLLAMCADLGLANEAFEIFEDMKTSATCL 405
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 135/306 (44%), Gaps = 1/306 (0%)
Query: 280 KFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY 339
K F +M ++G+ D ++++I + A E F++ G D ++ Y
Sbjct: 183 KLFDEMLQRGVRPDNVTFSTIISCARICSLPNKAVEWFEKMSSFGCEPDDVTYSAMIDAY 242
Query: 340 IEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQ 399
G ++ L + + + K ++ ++ + Y + VY+++ G P
Sbjct: 243 GRAGNIDMALRLYDRARTEKWRLDTVTFSTLIKMYGLAGNYDGCLNVYQEMKVLGVKPNM 302
Query: 400 VTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAK 459
V Y ++++A R +A+ ++ EM GF V Y+S++ YG+ DA+++ +
Sbjct: 303 VIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFSPNWVTYASLLRAYGRGRYSEDALFVYKE 362
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTP-DKVSYTTVISAYNRAR 518
MK KG E N +YN+L+ M + +++++M+ D +++++I+ Y+
Sbjct: 363 MKEKGMEMNTHLYNTLLAMCADLGLANEAFEIFEDMKTSATCLCDSWTFSSLITIYSCTG 422
Query: 519 EFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+ NE +G + +V + K+ + +++VK + G D+R
Sbjct: 423 NVSEAERMLNEMIESGSQPTIFVLTSLVQCYGKVGRTDDVVKTFNQLLDLGISPDDRFCG 482
Query: 579 SAMNAL 584
+N +
Sbjct: 483 CLLNVM 488
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 115/292 (39%), Gaps = 66/292 (22%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRK--LDSTPFSTH------ 260
+EKM S G D Y +++AY + G+ + L+ ++ K LD+ FST
Sbjct: 220 FEKMSSFGCEPDDVTYSAMIDAYGRAGNIDMALRLYDRARTEKWRLDTVTFSTLIKMYGL 279
Query: 261 ------------------------MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
+Y L D++G++ R ++A + +M G +
Sbjct: 280 AGNYDGCLNVYQEMKVLGVKPNMVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFSPNWVT 339
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
YASL+ ++ + A ++KE +EKGM + + L+ M + GL + ++ E MK
Sbjct: 340 YASLLRAYGRGRYSEDALFVYKEMKEKGMEMNTHLYNTLLAMCADLGLANEAFEIFEDMK 399
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
S C+ T++S+I Y S
Sbjct: 400 T----------------------------------SATCLCDSWTFSSLITIYSCTGNVS 425
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
+AE++ EM + G + +S+V YGK GR D + ++ G P+
Sbjct: 426 EAERMLNEMIESGSQPTIFVLTSLVQCYGKVGRTDDVVKTFNQLLDLGISPD 477
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 35/161 (21%)
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVIS---------------- 512
V +YN + + ++K+L +EKL+ EM +R V PD V+++T+IS
Sbjct: 162 VILYNVTLKVFRKSKDLDAMEKLFDEMLQRGVRPDNVTFSTIISCARICSLPNKAVEWFE 221
Query: 513 -------------------AYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
AY RA DM ++ Y+ R +D ++ ++
Sbjct: 222 KMSSFGCEPDDVTYSAMIDAYGRAGNIDMALRLYDRARTEKWRLDTVTFSTLIKMYGLAG 281
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ + + Q+MK G K + +Y++ ++A+ A QA+
Sbjct: 282 NYDGCLNVYQEMKVLGVKPNMVIYNTLLDAMGRAKRPWQAK 322
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 7/170 (4%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
++ +N+ + + + +Y +M + G + Y ++ AY + SE ++
Sbjct: 302 MVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFSPNWVTYASLLRAYGRGRYSEDALFVYK 361
Query: 246 ECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGI-LEDPSIYASLICSF 304
E K + ++ +TH+Y L G A EA + F DMK L D ++SLI +
Sbjct: 362 EMKEKGME---MNTHLYNTLLAMCADLGLANEAFEIFEDMKTSATCLCDSWTFSSLITIY 418
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVES 354
+ V AE + E E G V LV Y G V +T DVV++
Sbjct: 419 SCTGNVSEAERMLNEMIESGSQPTIFVLTSLVQCY---GKVGRTDDVVKT 465
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 190/454 (41%), Gaps = 82/454 (18%)
Query: 121 KLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFIT 180
+L+ L ++ D + ED K PDA+T + L+ +A K +LL+ ++
Sbjct: 222 NMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVS 281
Query: 181 DG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSA---------GIVLD---------- 220
+G + L+A+N+ + K M I + KM + I+LD
Sbjct: 282 EGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLHR 341
Query: 221 --------SGC-----YCQIMEAYYKIGDSEKVAALFLECK----SRKLDSTPFSTHMYK 263
SGC Y +++A K G + + ++F C+ K D F + M +
Sbjct: 342 LNEILDICSGCLNRPVYSYLIKALCKSGHASEAHSVF--CRMWNSHEKGDRYAFVS-MLE 398
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEK 323
LC++ + EA+ M EKGI D +Y + + + +V L+
Sbjct: 399 ALCNA----EKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRAN 454
Query: 324 GMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAA 383
G++ D ++ + GLV+K ++ E M++
Sbjct: 455 GVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGS------------------------ 490
Query: 384 VKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 443
C P VTY S+IN + +A +F +MQ+KG+D V YS ++
Sbjct: 491 -----------CKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIEC 539
Query: 444 YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPD 503
+GK+ ++ A L +M A+GC PN+ YN L+D R + K ++ ++++ +TPD
Sbjct: 540 FGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAHKFYETLKQQGLTPD 599
Query: 504 KVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVI 537
++Y+ + +R++ V+ R G VI
Sbjct: 600 SITYSILERLESRSQR---TVRIRKPSRNTGWVI 630
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/403 (19%), Positives = 161/403 (39%), Gaps = 37/403 (9%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
VYEKM+ G LD Y ++ A K G ++ +F + K D ++ Y IL
Sbjct: 205 VYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYT---YTILIR 261
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+G+ + + +M +G + + Y ++I + V A + + E R
Sbjct: 262 MSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKMIESD-CR 320
Query: 328 DPEVCLKLVLMYIEEG----LVEKTLDVVESM--------------KNAKLKISDCISCA 369
+ ++L + G + + LD+ K+ + + C
Sbjct: 321 PNQFTYSIMLDVLSTGGQLHRLNEILDICSGCLNRPVYSYLIKALCKSGHASEAHSVFCR 380
Query: 370 IVNGFSKRRGY---------------WAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL 414
+ N K Y A+ + + +G Y I +A ++
Sbjct: 381 MWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQ 440
Query: 415 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNS 474
S ++ M+ G V Y+ M++ +G+ G + A L +M+ C+P+V YNS
Sbjct: 441 VSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNS 500
Query: 475 LMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG 534
+++ G+ +L + L+K+M+ + PD +Y+ +I + ++ + DM ++E G
Sbjct: 501 MINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQG 560
Query: 535 GVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
+ + I++ + + E K + +K +G D Y
Sbjct: 561 CIPNIVTYNILLDCLERRGKTTEAHKFYETLKQQGLTPDSITY 603
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/345 (18%), Positives = 147/345 (42%), Gaps = 3/345 (0%)
Query: 257 FSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEEL 316
+ + YK L + +S ++ + + M+ KG D Y L+ + A V A ++
Sbjct: 181 LNGYTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQV 240
Query: 317 FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSK 376
F++ ++ D L+ M + G K + ++E M + ++ ++ K
Sbjct: 241 FEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGK 300
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ A+ + ++I C P Q TY+ +++ + ++ +++ ++ V
Sbjct: 301 NKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLHRLNEI-LDICSGCLNRPV-- 357
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
YS ++ K+G +A + +M + + + + S+++ A+ + L M
Sbjct: 358 YSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMP 417
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+ +T D Y + SA + ++ Y+ R NG V D IM+ F ++ ++
Sbjct: 418 EKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVD 477
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNFE 601
+ +L ++M+ K D Y+S +N L G +A L ++ +
Sbjct: 478 KASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQ 522
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 132/313 (42%), Gaps = 12/313 (3%)
Query: 278 ALKFFR--DMKEKGILEDPSIYAS-LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLK 334
AL FFR G D Y L+ F++ + A L E E G+ +
Sbjct: 100 ALSFFRFAATSLPGFRHDAFSYNRILVLLFSNRADPAEAMRLIAEMERDGVPGNISTVNL 159
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQG 394
LV M +E G + LD+ L+++ +V + R W +VYE++ +G
Sbjct: 160 LVGMGVEVG---RCLDLASKWG---LRLNGYTYKCLVQAHLRSREVWKGFEVYEKMRRKG 213
Query: 395 CIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 454
Y ++NA + + +A +VF +M+Q D Y+ ++ M GK G+ +
Sbjct: 214 YKLDIFAYNMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFV 273
Query: 455 WLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAY 514
L+ +M ++GC N+ YN++++ G+ K + + + +M P++ +Y+ ++
Sbjct: 274 SLLEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVL 333
Query: 515 NRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDE 574
+ + + + G ++R + ++ K E + M + K D
Sbjct: 334 STGGQLH---RLNEILDICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDR 390
Query: 575 RLYHSAMNALRDA 587
+ S + AL +A
Sbjct: 391 YAFVSMLEALCNA 403
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 201/484 (41%), Gaps = 19/484 (3%)
Query: 83 FDSFLHGMLKDPQTQELAYDYYNEAKKLP-EFRPEKSTLKLLIRYLVQSKKWDSIVSLSE 141
++ F +++ Q +E AY + E K P E P+ T +LIR L K SL E
Sbjct: 93 YNCFYEALIRTGQCEE-AYRLFKE--KWPQELIPDSITYGILIRGLCNFGKLKLACSLYE 149
Query: 142 DFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLA-FNSAMGGYNKLH 200
+ + P TC L+ + ++ ++A L+ F I A + + G +
Sbjct: 150 EMVDRGLRPVVLTCKFLLNALCKSGNLELA---LRYFEKMSSIPCAATWTILIDGLFRAI 206
Query: 201 MYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTH 260
+E+MK I ++ Y ++ K G KVA R L P T
Sbjct: 207 RVDEACYYFEEMKHTAIP-NNWTYTVVINGLVKAG---KVAE-----AERVLQEMPVPTL 257
Query: 261 M-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
Y + K+G +A DMK KG D Y +LI + E+ A EL +E
Sbjct: 258 ANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEE 317
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRR 378
+ + D L+ + + D++ +++N + +S +++GFSK
Sbjct: 318 MKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAA 377
Query: 379 GYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYS 438
A +++ ++++ G P VTY+++I C S+A EM K V YS
Sbjct: 378 RVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYS 437
Query: 439 SMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERR 498
S+++ + G + A + M A GC+PN+ +YNSL+ + L + KEM R
Sbjct: 438 SVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTER 497
Query: 499 KVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEEL 558
+PD V+Y T+I R D Y G I +++ L Q + +
Sbjct: 498 GCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRV 557
Query: 559 VKLL 562
++++
Sbjct: 558 LRVV 561
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 199/510 (39%), Gaps = 15/510 (2%)
Query: 86 FLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKI 145
FL L ELA Y+ + +P +T +LI L ++ + D E+ K
Sbjct: 165 FLLNALCKSGNLELALRYFEKMSSIPC----AATWTILIDGLFRAIRVDEACYYFEEMK- 219
Query: 146 YNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYST 205
+ +P+ T + ++ V+A K A +LQ L + S +GG+ K
Sbjct: 220 HTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVP---TLANYTSVIGGHCKAGDMGKA 276
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
+ E MK G D+ Y ++ + ++ + ++ L E KS F+ Y IL
Sbjct: 277 YHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFT---YDIL 333
Query: 266 CDSLGKSGRAFEALKFFRDMK-EKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKG 324
L ++ R EA ++ E + Y +LI F+ V A +LF E G
Sbjct: 334 IAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAG 393
Query: 325 MLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAV 384
D L+ G + +E M K+ + ++++G + AA
Sbjct: 394 QHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAAS 453
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
V++ +++ GC P Y S+I C+ A+ EM ++G V Y +++
Sbjct: 454 TVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGL 513
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+ R +A L + +G E + N ++ + L Q +++ + + +P
Sbjct: 514 CRWSRTDEACDLYVRSLEQGIEISETSCNVVI---ASLRCLEQAQRVLRVVLATGNSPTA 570
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
Y TVI + + + + G D + +VG + + + L++
Sbjct: 571 FFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEE 630
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
M G+K Y + +NAL AG +A
Sbjct: 631 MVRLGSKPSVGTYSTLLNALFKAGKPSEAH 660
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 107/536 (19%), Positives = 211/536 (39%), Gaps = 54/536 (10%)
Query: 73 HQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKK 132
+ VP + S + G K + AY + K+ ++ + T LI + ++
Sbjct: 250 QEMPVPTLANYTSVIGGHCKAGDMGK-AYHLLEDMKR-KGYQGDNLTYNTLIHGHCRLQE 307
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA--LLAFN 190
D L E+ K + +PD T L+A RA++ A LL + + ++++N
Sbjct: 308 IDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYN 367
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
+ + G++K ++ +M +AG D Y ++ G + + + E +
Sbjct: 368 TLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGK 427
Query: 251 K-LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI---CSFAS 306
K L P + + LC ++G A F M G + ++Y SLI C
Sbjct: 428 KILPKVPVYSSVISGLC----RAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGR 483
Query: 307 ITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCI 366
+ + KL KE E+G D L++ ++ D+ ++IS+
Sbjct: 484 LCDAKLR---VKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISE-T 539
Query: 367 SCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQ 426
SC +V + R A +V +++ G P YA++I + C+ ++A ++ +M
Sbjct: 540 SCNVV--IASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMI 597
Query: 427 QKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
G ++V + + AM + +M G +P+V Y++L++ +A
Sbjct: 598 GAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPS 657
Query: 487 QVEKLWKEM-ERRKVTPDKVSYTTVISAYN------------------------------ 515
+ + + + PD++ Y +I+AY+
Sbjct: 658 EAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTL 717
Query: 516 -----RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMK 566
R R M + E + N V++ A I++ F +L Q + V++L +MK
Sbjct: 718 LKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMK 773
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 153/359 (42%), Gaps = 16/359 (4%)
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
K+ S P + + IL D L ++ R EA +F +MK I + + Y +I +V
Sbjct: 185 KMSSIPCAA-TWTILIDGLFRAIRVDEACYYFEEMKHTAIPNNWT-YTVVINGLVKAGKV 242
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI 370
AE + +E + V + + + G + K ++E MK + + +
Sbjct: 243 AEAERVLQEMPVPTLANYTSV----IGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTL 298
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
++G + + A ++ E++ S +P TY +I CR S+A + ++ +
Sbjct: 299 IHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNE-- 356
Query: 431 DKC---VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
D C VV+Y++++ + K R+ DA L +M G P+V Y++L+ A +
Sbjct: 357 DDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASE 416
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
+EM +K+ P Y++VIS RA E D ++ NG + A+ ++
Sbjct: 417 AHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIY 476
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL-----RDAGLQMQAQWLQQNFE 601
K ++ + +++M G D Y + + L D + + L+Q E
Sbjct: 477 GLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIE 535
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 180/428 (42%), Gaps = 38/428 (8%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCD 267
+++ M G++LD Y +M+ +K G+ + E R L +Y + +
Sbjct: 526 LFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAV---VYNVFIN 582
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
L + G+ EA F ++M+ G+ D + Y ++I + A +L E + +
Sbjct: 583 CLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKP 642
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
+ LV+ +E G+VEK ++ M +A + ++ S R + ++V+
Sbjct: 643 NLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVH 702
Query: 388 E-----------------------------------QLISQGCIPGQVTYASIINAYCRI 412
E +++ +G P +T+ ++I +C+
Sbjct: 703 ELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKS 762
Query: 413 ALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIY 472
+ A + +M +G + +++++ GRI +A ++ +MK G EPN Y
Sbjct: 763 SHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTY 822
Query: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRM 532
+ L+ + + N + +L+ EM + P +Y ++IS + +A + + ++E +
Sbjct: 823 DILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKR 882
Query: 533 NGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQ 592
G + + I++ +SKL E+ LL+DMK G K + S A G+ +
Sbjct: 883 RGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWE 942
Query: 593 AQWLQQNF 600
A+ L +
Sbjct: 943 ARRLLKTL 950
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 186/449 (41%), Gaps = 39/449 (8%)
Query: 170 IANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
+A L++ DG + ++ +N+ + GY K+ + + V E+M + G+ LD Y ++
Sbjct: 174 LAEMLVRGRGIDG-LGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVA 232
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
++ GD++ A + + K D S + L K R EA + M G
Sbjct: 233 GFFYSGDAD---AAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSG 289
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
+L D ++L+ A LF+E ++ G+ + + + V ++L
Sbjct: 290 VLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESL 349
Query: 350 DVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAY 409
++ M + + + + +++ K A V +S P VTY +++A+
Sbjct: 350 GLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAH 409
Query: 410 CRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
CR AE++ ++M++K VV +SS++ K G I A + KMK G PNV
Sbjct: 410 CRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNV 469
Query: 470 WIYNSLMD---------------------------------MHGRAK--NLRQVEKLWKE 494
Y +L+D ++G K N+ + E L+K+
Sbjct: 470 VTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKD 529
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQ 554
M R + D V+Y T++ + +K E D + + + +L +
Sbjct: 530 MGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGK 589
Query: 555 IEELVKLLQDMKSEGTKLDERLYHSAMNA 583
E L++M++ G + D+ Y++ ++A
Sbjct: 590 FSEAKSFLKEMRNTGLEPDQATYNTMISA 618
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 174/410 (42%), Gaps = 4/410 (0%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
L+ S D+ ++E K V P T + L+ + ++ + A TL + + G
Sbjct: 230 LVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSG 289
Query: 183 EIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ ++ ++ + G + + ++ +M G+ + YC +++ K+ +
Sbjct: 290 VLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESL 349
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
L E SR MY + D LGK G+ EA R I + Y L+
Sbjct: 350 GLLGEMVSR---GVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLV 406
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + AE++ + EEK + + ++ ++ G + K + MK++ +
Sbjct: 407 DAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIA 466
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ +++GF K +G AA+ VY ++ +G S++N + +AE +
Sbjct: 467 PNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEAL 526
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F +M ++G V Y++++ KTG + A+ + ++ + P+ +YN ++ R
Sbjct: 527 FKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCR 586
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
+ + KEM + PD+ +Y T+ISA R +K NE +
Sbjct: 587 LGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMK 636
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 179/418 (42%), Gaps = 6/418 (1%)
Query: 181 DG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEK 239
DG E +++ + +G Y K+ +YE M +G++ D +++ + G +
Sbjct: 253 DGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSE 312
Query: 240 VAALFLECKSRKLDSTPFSTHM-YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYA 298
ALF E K+ P H+ Y DSL K R E+L +M +G+ D +Y
Sbjct: 313 AYALFREMD--KIGVAP--NHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYT 368
Query: 299 SLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNA 358
+++ +++ A+++ + A + + LV + G ++ ++ M+
Sbjct: 369 TVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEK 428
Query: 359 KLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKA 418
+ + +I+NG KR A ++ G P VTY ++I+ + + A
Sbjct: 429 SVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAA 488
Query: 419 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
V+ +M +G + S+V K G I +A L M +G + Y +LMD
Sbjct: 489 LDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDG 548
Query: 479 HGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVID 538
+ N+ K+ +E+ R ++PD V Y I+ R +F F E R G D
Sbjct: 549 LFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPD 608
Query: 539 RAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+A M+ + + +KLL +MK K + Y + + L +AG+ +A++L
Sbjct: 609 QATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYL 666
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 166/366 (45%), Gaps = 10/366 (2%)
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+G++ +A + + + R +D + L D K AL M +G+ D
Sbjct: 168 VGEAAALAEMLV--RGRGIDG--LGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLD 223
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDV 351
Y +L+ F + A E+ + + G+ +P V L+ Y + +E+ +
Sbjct: 224 VVGYNTLVAGFFYSGDADAAWEVAERMKADGV--EPSVVTHTTLIGEYCKMKRIEEAFTL 281
Query: 352 VESMKNAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
E M + + + D ++ A+V+G + + A ++ ++ G P VTY + I++
Sbjct: 282 YEGMVRSGV-LPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLA 340
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
++ +++ + EM +G +V Y++++ GK G+I +A ++ + PN
Sbjct: 341 KVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCV 400
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
Y L+D H RA N+ E++ +ME + V+P+ V+++++++ + + +
Sbjct: 401 TYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKM 460
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQ 590
+ +G + G ++ F K E + + +DM EG + + + S +N LR G
Sbjct: 461 KDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNI 520
Query: 591 MQAQWL 596
+A+ L
Sbjct: 521 EEAEAL 526
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 143/342 (41%), Gaps = 20/342 (5%)
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P + + L +L SG A +F + + DP S+I S+ S+ ++ A
Sbjct: 48 PPPARLLRRLIPALASSGLVAAASRF------RPVPGDPLTLNSIILSYCSLHALRPALS 101
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYI------EEGLVEKTLDVVESMKNAKLKISDCISCA 369
L + + P+V V I E+G V+ M +
Sbjct: 102 LLRSSSGP----QPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMST 157
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQ--VTYASIINAYCRIALYSKAEKVFIEMQQ 427
+ G S+ A + E L+ I G V + ++I+ YC++ + A V M
Sbjct: 158 ALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTT 217
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVA-KMKAKGCEPNVWIYNSLMDMHGRAKNLR 486
+G VV Y+++VA + +G DA W VA +MKA G EP+V + +L+ + + K +
Sbjct: 218 QGLSLDVVGYNTLVAGFFYSGDA-DAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIE 276
Query: 487 QVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+ L++ M R V PD V+ + ++ R F + E G + +
Sbjct: 277 EAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFI 336
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+K+ ++ E + LL +M S G +D +Y + M+ L G
Sbjct: 337 DSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEG 378
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 80/464 (17%), Positives = 172/464 (37%), Gaps = 76/464 (16%)
Query: 65 IELNRDSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLI 124
+++ RD H+ + DS ++G+ K+ +E + + ++ + L+
Sbjct: 489 LDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGER--GLLLDHVNYATLM 546
Query: 125 RYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-E 183
L ++ + + + ++ N+ PDA + + R KF A + L+ G E
Sbjct: 547 DGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLE 606
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
+N+ + + + + +MK + I + Y ++ + G EK L
Sbjct: 607 PDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYL 666
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E S TP + Y+ + + S + L+ M G+ D ++Y +L+
Sbjct: 667 LNEMASAGFTPTPLT---YRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHV 723
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY----------------IEEGL--- 344
+ A + E +G+ D L+L + + +GL
Sbjct: 724 LCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPN 783
Query: 345 ----------------VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
+ + V+ MK L+ ++ +V G++K+ A+++Y
Sbjct: 784 IATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYC 843
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG------------------- 429
+++S+G IP TY S+I+ + + + ++A+++F EM+++G
Sbjct: 844 EMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLR 903
Query: 430 ----------------FDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
F SSM + K G +A L+
Sbjct: 904 NGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLL 947
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 119/239 (49%)
Query: 351 VVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC 410
+VE M ++ + ++N + R A+K +E++ S+G +P +VTY S+I+ Y
Sbjct: 165 LVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYG 224
Query: 411 RIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVW 470
R+ ++A +++ +++ + V Y ++ +Y + G + + LV +M+ G PN
Sbjct: 225 RVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAV 284
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEF 530
I N+LM +A + Q +K++ EM V+P V+ + ++ Y R +D + Y
Sbjct: 285 IMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETL 344
Query: 531 RMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
+ G D A+ ++ + ++E+ +L++MK G D Y +AMN G+
Sbjct: 345 KTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGM 403
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 160/353 (45%), Gaps = 4/353 (1%)
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFE-ALKFFRD 284
I+ I EK A F K+R + + + Y ++ L ++GR E + K +
Sbjct: 111 NIVTVLNNINRWEKALAFFEWLKARP-ELYEINRYTYNVMLKIL-RNGRQLELSEKLVEE 168
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M +GI D +++LI + + A + F+ + +G++ D ++ MY G
Sbjct: 169 MTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGR 228
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
V + +++ E +K+ K+ AI N +++ Y + +++ +++ G P V +
Sbjct: 229 VNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNT 288
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
++ + ++A+KVF EM+ G V S +V MY + G A + +K +G
Sbjct: 289 LMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEG 348
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
+ +V +YNSLM + Q E + KEM+R PD ++Y T ++ Y D
Sbjct: 349 WKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPAR 408
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG-TKLDERL 576
+ +++ G D + +M+ +IE+ K+ +M G DER+
Sbjct: 409 RMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPDERV 461
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 113/210 (53%)
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
K+ E++ +G P T++++IN R +A K F M+ +G V Y+S++ MY
Sbjct: 164 KLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMY 223
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
G+ GR+ +A+ L K+K+ + + Y ++ +++ RA + + + +L +EM +P+
Sbjct: 224 GRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNA 283
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
V T++ ++A + + K +NE R +G I+V +++++ ++ ++ +
Sbjct: 284 VIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYET 343
Query: 565 MKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+K+EG K D +Y+S M A + G QA+
Sbjct: 344 LKTEGWKCDVAVYNSLMKACVEGGRVEQAE 373
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 153/335 (45%), Gaps = 7/335 (2%)
Query: 98 ELAYDYYNEAKKLPE-FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCS 156
E A ++ K PE + + T ++++ L ++ + L E+ + PD +T S
Sbjct: 123 EKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFS 182
Query: 157 RLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSA 215
L+ R R+ + A + ++G + + +NS + Y ++ + +YEK+KS
Sbjct: 183 TLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSV 242
Query: 216 GIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRA 275
LD+ Y I Y + GD + + L E R S+P + M L +L K+G+
Sbjct: 243 NWKLDTVTYGAIANVYARAGDYQSIIQLVQEM--RDSGSSPNAVIM-NTLMGTLSKAGKV 299
Query: 276 FEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKL 335
+A K F +M+ G+ P + L+ + + A E+++ + +G D V L
Sbjct: 300 NQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSL 359
Query: 336 VLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ +E G VE+ D+++ MK A +N ++ + A ++++++++
Sbjct: 360 MKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNG 419
Query: 396 IPGQVTYASIINAYCRIA-LYSKAEKVFIEMQQKG 429
P + +I A C++A +A K+F EM + G
Sbjct: 420 KPDTPLFTVMIRA-CKLAGEIEQASKIFDEMMESG 453
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Query: 423 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG--CEPNVWIYNSLMDMHG 480
+E + +DK + A ++V + R A+ +KA+ E N + YN ++ +
Sbjct: 96 VEAALESWDKSLSA-KNIVTVLNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKILR 154
Query: 481 RAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+ L EKL +EM R + PD +++T+I+ R R+ + +K++ + G V D
Sbjct: 155 NGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEV 214
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
++ ++ ++ ++ E V+L + +KS KLD Y + N AG
Sbjct: 215 TYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAG 262
>gi|255661204|gb|ACU25771.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 426
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 159/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G +AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G+ D ++ ++ + L ++ ++ MK A + ++ + + +
Sbjct: 70 LKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLTMYVENQK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C T +I+ Y ++ + +A+K+F M++ G + V++Y++
Sbjct: 130 FLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPNVISYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K E NV YN++M ++G+ + L +EM
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNXG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++K + D +A + L AG +A W+
Sbjct: 310 RLLHELK----RPDNIPRDTAXHILAGAGRIEEATWV 342
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 152/363 (41%), Gaps = 33/363 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D P +Y L + K +A+ F +K GI D Y S+I F K
Sbjct: 38 DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDXVAYNSMINVFGKAKLFKE 97
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAI-V 371
A L E + G+ D L+ MY+E + L V M+ K + D +C I +
Sbjct: 98 ARSLISEMKTAGVXPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCSL-DLTTCNIMI 156
Query: 372 NGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
+ + + A K++ + G P ++Y +++ Y L+ +A +F MQ+K +
Sbjct: 157 DVYGQLDMAKEADKLFWSMRKIGIEPNVISYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
+ VV Y++M+ +YGKT A L+ +M G EPN Y++++ + G+ L + L
Sbjct: 217 QNVVTYNTMMMIYGKTLEHEKANNLIQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXL 276
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE---------------------- 529
++++ V D+V Y T+I AY RA + +E
Sbjct: 277 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAXHILAGAGRI 336
Query: 530 ------FRMN---GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
FR G V D + M+ +FSK + +V++ M+ G D +
Sbjct: 337 EEATWVFRQAIDAGEVKDITVFSRMIDLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALV 396
Query: 581 MNA 583
+NA
Sbjct: 397 LNA 399
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 186/426 (43%), Gaps = 18/426 (4%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVAS----CVRARKFKI 170
PE+ T LI + + +D +S + + V D S L+ C ++ I
Sbjct: 7 PERYTYSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 171 ANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
+ L + IT +A +NS + + K ++ + +MK+AG+ D+ Y ++
Sbjct: 67 FSRLKRSGITPDXVA---YNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLTM 123
Query: 231 YYKIGDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEK 288
Y + + ++F E + K LD T + I+ D G+ A EA K F M++
Sbjct: 124 YVENQKFLEALSVFAEMREIKCSLDLTTCN-----IMIDVYGQLDMAKEADKLFWSMRKI 178
Query: 289 GILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKT 348
GI + Y +L+ + A LF+ + K + ++ ++++Y + EK
Sbjct: 179 GIEPNVISYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKA 238
Query: 349 LDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINA 408
++++ M N ++ + I++ + K A ++++L S G QV Y ++I A
Sbjct: 239 NNLIQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQVLYQTMIVA 298
Query: 409 YCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPN 468
Y R L + A+++ E+++ + + + GRI +A W+ + G +
Sbjct: 299 YERAGLVAHAKRLLHELKRPD----NIPRDTAXHILAGAGRIEEATWVFRQAIDAGEVKD 354
Query: 469 VWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYN 528
+ +++ ++D+ + K V +++ +M PD V++AY + EFD Y
Sbjct: 355 ITVFSRMIDLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAHXVYM 414
Query: 529 EFRMNG 534
+ G
Sbjct: 415 NMQDEG 420
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 9/212 (4%)
Query: 397 PGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWL 456
P + TY+++I + + L+ A M+Q +V YS+++ + K A+ +
Sbjct: 7 PERYTYSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+++K G P+ YNS++++ G+AK ++ L EM+ V PD VSY+T+++ Y
Sbjct: 67 FSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLTMYVE 126
Query: 517 AREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
++F + + E R +D IM+ V+ +L +E KL M+ G + +
Sbjct: 127 NQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPNVIS 186
Query: 577 YHSAMNALRDAGL---------QMQAQWLQQN 599
Y++ + DA L MQ + ++QN
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 143/360 (39%), Gaps = 24/360 (6%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ +I ++K + SL + K V PD + S L+ V +KF A
Sbjct: 77 PDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLTMYVENQKFLEA--- 133
Query: 175 LQVFITDGEIA----LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEA 230
L VF EI L N + Y +L M ++ M+ GI + Y ++
Sbjct: 134 LSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPNVISYNTLLRV 193
Query: 231 YYKIGDSE---KVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKE 287
Y GD+E + LF + + ++ + Y + GK+ +A ++M
Sbjct: 194 Y---GDAELFGEAIHLFRLMQRKNIEQNVVT---YNTMMMIYGKTLEHEKANNLIQEMHN 247
Query: 288 KGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEK 347
GI + Y+++I + + ++ A LF++ G+ D + +++ Y GLV
Sbjct: 248 XGIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAH 307
Query: 348 TLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIIN 407
++ +K D + W V+ Q I G + ++ +I+
Sbjct: 308 AKRLLHELKRPDNIPRDTAXHILAGAGRIEEATW----VFRQAIDAGEVKDITVFSRMID 363
Query: 408 AYCRIALYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC 465
+ + Y+ +VF +M+ G+ D V+A ++ YGK A + M+ +GC
Sbjct: 364 LFSKYKKYANVVEVFDKMRGLGYFPDSNVIAL--VLNAYGKLHEFDKAHXVYMNMQDEGC 421
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 51/121 (42%)
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+ + P + Y++L+ G+ + ME+ +V D V Y+ +I + ++
Sbjct: 1 RZRALSPERYTYSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ ++ + +G D M+ VF K +E L+ +MK+ G D Y +
Sbjct: 61 SKAISIFSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTL 120
Query: 581 M 581
+
Sbjct: 121 L 121
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 150/335 (44%), Gaps = 2/335 (0%)
Query: 261 MYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEA 320
MY + D + K G A + M G+ + Y +L+ S + EEL E
Sbjct: 336 MYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 395
Query: 321 EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS-CAIVNGFSKRRG 379
+K D LV + + GLV++ ++++E M + D I+ ++NGF K
Sbjct: 396 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGC-MPDVITYTTVINGFCKEGL 454
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
AV + + + + GC P ++Y ++ C + AE + +M Q+G + +++
Sbjct: 455 IDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNT 514
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ K G + A+ L+ +M GC P++ Y++++D G+A + +L M +
Sbjct: 515 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 574
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
++P+ + Y+++ SA +R + ++ ++ + D + ++ K + E +
Sbjct: 575 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAI 634
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ L M S G +E Y + L G +AQ
Sbjct: 635 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 669
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/474 (19%), Positives = 193/474 (40%), Gaps = 41/474 (8%)
Query: 108 KKLPEF--RPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA 165
+ LP F P+ + +++ L +K+W + L E+ P+ T + L++ R
Sbjct: 253 RDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRN 312
Query: 166 RKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCY 224
F+ + +L + G + + + + G K + +M S G+ + CY
Sbjct: 313 GLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCY 372
Query: 225 CQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRD 284
+++ E+ L E + P + IL D ++G ++
Sbjct: 373 NTLLKGLCSAERWEETEELLAEMFDK---DCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 429
Query: 285 MKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGL 344
M E G + D Y ++I F +EGL
Sbjct: 430 MLEHGCMPDVITYTTVINGFC-----------------------------------KEGL 454
Query: 345 VEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYAS 404
+++ + +++SM K + ++ G + A + Q+I QGC +T+ +
Sbjct: 455 IDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNT 514
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKG 464
+IN C+ L +A ++ +M G +++YS+++ GK G+ +A+ L+ M KG
Sbjct: 515 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 574
Query: 465 CEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCV 524
PN IY+S+ R + +V +++ ++ + D V Y VIS+ + E + +
Sbjct: 575 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAI 634
Query: 525 KFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYH 578
+F +G V + + I++ + ++E ++L ++ S+G + H
Sbjct: 635 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKH 688
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 154/340 (45%), Gaps = 10/340 (2%)
Query: 254 STPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLA 313
+ P + + L L ++G + M E G D +YA++I +++A
Sbjct: 294 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVA 353
Query: 314 EELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV-----EKTLDVVESMKNAKLKISDCISC 368
E+ G L+ VC +L +GL E+T +++ M + + D
Sbjct: 354 HEILNRMPSYG-LKPNVVCYNTLL----KGLCSAERWEETEELLAEMFDKDCPLDDVTFN 408
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
+V+ F + +++ EQ++ GC+P +TY ++IN +C+ L +A + M
Sbjct: 409 ILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 468
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G ++Y+ ++ R DA L+++M +GC N +N+L++ + + Q
Sbjct: 469 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 528
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
+L K+M +PD +SY+TVI +A + D ++ N G + I +
Sbjct: 529 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 588
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
S+ +I +++++ +++ + D LY++ +++L G
Sbjct: 589 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRG 628
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 165/369 (44%), Gaps = 18/369 (4%)
Query: 247 CKSRKLDS---------TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
C++ +L+S P + + Y + +L GR +AL +M +G P +Y
Sbjct: 138 CRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMY 197
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI-EEGLVEKTLDVVESMK 356
++ + + A + ++ +G D C LVL I ++G V++ L ++ +
Sbjct: 198 HVILEAACRGGGFRSAVRVLEDLHARGCALDVGNC-NLVLNAICDQGSVDEALHLLRDLP 256
Query: 357 NAKLKISDCIS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+ + D +S A++ G + + ++ E+++ C P VT+ ++I+ CR L+
Sbjct: 257 SFGCE-PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLF 315
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+ +V +M + G + Y++++ K G + A ++ +M + G +PNV YN+L
Sbjct: 316 ERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTL 375
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ A+ + E+L EM + D V++ ++ + + D ++ + +G
Sbjct: 376 LKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGC 435
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDA-----GLQ 590
+ D ++ F K I+E V LL+ M + G K + Y + L A
Sbjct: 436 MPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAED 495
Query: 591 MQAQWLQQN 599
+ +Q +QQ
Sbjct: 496 LMSQMIQQG 504
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 8/159 (5%)
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
Y++MVA Y + G++ A L A + PN + Y ++ + + EM
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPVP---PNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
RR P Y ++ A R F V+ + G +D +++ ++
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 557 ELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQW 595
E + LL+D+ S G + D Y++ + GL M +W
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLK-----GLCMAKRW 280
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/477 (21%), Positives = 203/477 (42%), Gaps = 10/477 (2%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P + L+ V+S +W + + F+ V P+ T + L+ + +F+ L
Sbjct: 111 PTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGL 170
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L G + + + +GG K + V+++M+ G+ D CY I++ ++K
Sbjct: 171 LTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFK 230
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
GD K ++ +L S Y ++ L K GR E L+ + MK+ D
Sbjct: 231 RGDFVKAGEMWERLLREELVFP--SVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCD 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVE 353
Y++LI + ++ A ++++E +G+ D C ++ + G VE+ ++ E
Sbjct: 289 LFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWE 348
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
M L+ + + G + A+ +++ L+ TY +++ C
Sbjct: 349 EMGKCSLRNVRSYN-IFLKGLFENGKVDDAMMLWDGLLEAD----SATYGVVVHGLCWNG 403
Query: 414 LYSKAEKVFIEMQQK--GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWI 471
++A +V E + + G D AYSS++ K GR+ +A +V M +GC+ N +
Sbjct: 404 YVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHV 463
Query: 472 YNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFR 531
N L+D + L K+++EM + + VSY +I+ RA F NE
Sbjct: 464 CNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEML 523
Query: 532 MNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
G D ++G + + ++ ++L G K D +Y+ ++ L +G
Sbjct: 524 EKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSG 580
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 152/368 (41%), Gaps = 54/368 (14%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE---CKSRKLDSTPFSTHMYKI 264
VYE+M G+ D ++ K G+ E+ L+ E C R + S Y I
Sbjct: 311 VYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRS-------YNI 363
Query: 265 LCDSLGKSGRAFEALKFFRDMKEKGILE-DPSIYASLICSFASITEVKLAEELFKEAE-- 321
L ++G+ +A+ + G+LE D + Y ++ V A ++ +EAE
Sbjct: 364 FLKGLFENGKVDDAMMLW-----DGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHR 418
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
E GM D L+ +EG +++ VVE M K + + +++GF K
Sbjct: 419 EGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLD 478
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
+AVKV+ ++ +GC V+Y +IN R + +A EM +KG+ ++ YS+++
Sbjct: 479 SAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLI 538
Query: 442 A----------------------------MYG-------KTGRIRDAMWLVAKMKAKGCE 466
MY +G++ DA+ L + ++ K C
Sbjct: 539 GGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKC- 597
Query: 467 PNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
N+ +N++M+ + N K+W + ++ PD +SY + V F
Sbjct: 598 VNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGF 657
Query: 527 YNEFRMNG 534
++ + G
Sbjct: 658 LDDALVRG 665
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 97/225 (43%), Gaps = 2/225 (0%)
Query: 366 ISCAIVNGFSKRRGYWAAVKVYEQLISQ-GCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
+ ++ ++K R A+ V++ + GC P ++ +++NA+ +++AE F
Sbjct: 79 VPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKY 138
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
+ V Y+ ++ + K G L+ M G P+ Y +L+ ++ +
Sbjct: 139 FEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGD 198
Query: 485 LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA-G 543
L +++ EM R V PD V Y +I + + +F + + V ++
Sbjct: 199 LGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYN 258
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+M+ K + E +++ + MK K D Y + ++ L +AG
Sbjct: 259 VMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAG 303
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 79/436 (18%), Positives = 163/436 (37%), Gaps = 39/436 (8%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKW 133
+ P ++ + G+ K + E + + KK E + + T LI L ++
Sbjct: 248 ELVFPSVVSYNVMISGLCKCGRFSE-GLEIWERMKK-NERKCDLFTYSALIHGLSEAGDL 305
Query: 134 DSIVSLSEDFKIYNVLPDAHTCSRLVASCVRA------------------RKFKIANTLL 175
+ E+ V PD TC+ ++ +A R + N L
Sbjct: 306 GGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFL 365
Query: 176 QVFITDGEI--------ALLAFNSAMGG-------YNKLHMYYSTILVYEKMKSAGIVLD 220
+ +G++ LL +SA G +N +L + + G+ +D
Sbjct: 366 KGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVD 425
Query: 221 SGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALK 280
Y ++ A K G ++ + +E +++ F++H+ +L D K + A+K
Sbjct: 426 EFAYSSLINALCKEGRLDEADGV-VELMNKR--GCKFNSHVCNVLIDGFVKHSKLDSAVK 482
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
FR+M KG Y LI + A + E EKG D L+
Sbjct: 483 VFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLY 542
Query: 341 EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQV 400
E +++ L + + K + +++ A+++Y L + C+ V
Sbjct: 543 ESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-NLV 601
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
T+ +I+ + ++ A K++ + + +++Y+ + GR+ DA+ +
Sbjct: 602 THNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDA 661
Query: 461 KAKGCEPNVWIYNSLM 476
+G P +N L+
Sbjct: 662 LVRGFLPTAITWNILV 677
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 154/330 (46%), Gaps = 9/330 (2%)
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPE-VCLKLV 336
L+FF++M+ G L + Y ++I + + A + KG+ +P + ++
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGL--EPNLITFNMI 59
Query: 337 LMYI-EEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGC 395
+ + +G +++T +V+ M + +VNG+ K + A+ ++ +++ G
Sbjct: 60 INGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGL 119
Query: 396 IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMW 455
P VTY S+IN+ C+ ++A + F +M +G Y++++ + + G + +A
Sbjct: 120 SPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYR 179
Query: 456 LVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYN 515
++ +M G P++ YN+L++ H + + L ++M + V PD VSY+T+IS +
Sbjct: 180 VLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFA 239
Query: 516 RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDER 575
R +E D + E + D ++ + ++ E + Q+M + DE
Sbjct: 240 RNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEF 299
Query: 576 LYHSAMNALRDAG-----LQMQAQWLQQNF 600
Y + +NA G L + + +Q+ F
Sbjct: 300 TYTTLINAYCKEGDLNKALHLHDEMIQKGF 329
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 163/354 (46%), Gaps = 3/354 (0%)
Query: 209 YEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDS 268
+++M+ G + + Y +++ Y K+ +++ + L+ + + ++ +
Sbjct: 6 FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLIT---FNMIING 62
Query: 269 LGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD 328
L + GR E + +M KG + D Y +L+ + A L E G+ +
Sbjct: 63 LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122
Query: 329 PEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYE 388
L+ + G + + ++ + M L ++ I+NGF+++ A +V
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182
Query: 389 QLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 448
++ G IP VTY ++IN +C + +A + +M KG VV+YS++++ + +
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242
Query: 449 RIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYT 508
+ A + +M K P+ Y+SL+ + L + +++EM K+ PD+ +YT
Sbjct: 243 ELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYT 302
Query: 509 TVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLL 562
T+I+AY + + + + ++E G + D +++ +K ++ +E +LL
Sbjct: 303 TLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLL 356
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/513 (20%), Positives = 212/513 (41%), Gaps = 29/513 (5%)
Query: 77 VPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSI 136
+P+ +++ + G K +T E A+ + + L P T ++I L + +
Sbjct: 15 LPNVVTYNTMIDGYCKLKRTDE-AFGFL-RSMGLKGLEPNLITFNMIINGLCRDGRLKET 72
Query: 137 VSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGG 195
+ + +PD T + LV + F A L + +G ++ + S +
Sbjct: 73 SEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINS 132
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
K + +++M G+ + Y I+ + + G ++ + E
Sbjct: 133 MCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGF--I 190
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
P S Y L + GR EA+ +DM KG+L D Y+++I FA E+ A +
Sbjct: 191 P-SIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQ 249
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
+ E K +L D L+ E+ + + D+ + M KL + ++N +
Sbjct: 250 MKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYC 309
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDK--- 432
K A+ +++++I +G +P VTY +IN + A +A ++ +++ +D
Sbjct: 310 KEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLF---YDDSIP 366
Query: 433 ------------CVVAYSSMVAM---YGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMD 477
C + + S VA+ + G + +A + M K +PN IYN ++
Sbjct: 367 SAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIH 426
Query: 478 MHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA-YNRAREFDMCVKFYNEFRMNGGV 536
H R N+ + KL+KEM P V+ ++ A + + ++ + R + +
Sbjct: 427 GHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILR-SCKL 485
Query: 537 IDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
D ++ ++V + K ++ + LL +M +G
Sbjct: 486 TDAELSKVLVEINQKEGNMDMVFNLLTEMAKDG 518
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 174/391 (44%), Gaps = 2/391 (0%)
Query: 208 VYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKIL 265
V M G++ + Y IM Y G ++ + +S ++ + Y L
Sbjct: 253 VLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTL 312
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
G M GI D +Y LIC++A +V A +F + ++G+
Sbjct: 313 LQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGL 372
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK 385
D ++ + + G VE + E M + L + + ++++G + A +
Sbjct: 373 NPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 432
Query: 386 VYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
+ +++ +G + + SII+++C+ ++EK+F M + G ++ YS+++ Y
Sbjct: 433 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 492
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
G++ +AM L++ M + G +PN Y +L++ + + + L+KEME V+PD +
Sbjct: 493 LAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDII 552
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
+Y ++ + R + Y +G I+ + I++ K ++ +++ Q++
Sbjct: 553 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNL 612
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
KL+ R ++ ++AL G +A+ L
Sbjct: 613 CLMDLKLEARTFNIMIDALLKVGRNGEAKDL 643
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 147/339 (43%), Gaps = 10/339 (2%)
Query: 255 TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAE 314
TP + H Y IL ++ R ++ +KG + + L+ + A
Sbjct: 84 TP-TVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 315 EL-FKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS--DCIS-CAI 370
++ + E + D C L+ +E ++ L++ M + + S D +S +
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTV 202
Query: 371 VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGF 430
+NGF K A Y +++ + P VTY+SII A C+ KA +V M + G
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGV 262
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGC-----EPNVWIYNSLMDMHGRAKNL 485
Y+S++ Y +G+ ++A+ + K+++ G EP++ Y +L+ + L
Sbjct: 263 MPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGAL 322
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
+ L M R + PD Y +I AY + + D + +++ R G D G +
Sbjct: 323 VGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAV 382
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+G+ K ++E+ + + M EG +Y+S ++ L
Sbjct: 383 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 421
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/506 (18%), Positives = 199/506 (39%), Gaps = 46/506 (9%)
Query: 70 DSHHQTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQ 129
D + PD + + ++G K+ + + AY Y+E P+ T +I L +
Sbjct: 186 DGRGGGSAPDVVSYTTVINGFFKEGDSGK-AYSTYHEMLD-RRISPDVVTYSSIIAALCK 243
Query: 130 SKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG------E 183
+ D + + V+P+ T + ++ + + K A L+ +DG E
Sbjct: 244 GQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLE 303
Query: 184 IALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAAL 243
+ + + + GY + + M GI D Y ++ AY K G ++ +
Sbjct: 304 PDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLV 363
Query: 244 FLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
F + + + L+ + Y + L KSGR +A+ +F M ++G+ +Y SLI
Sbjct: 364 FSKMRQQGLNPDAVT---YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 420
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ + + AEEL E ++G +CL +
Sbjct: 421 LCTCNKWERAEELILEMLDRG------ICLNTIFFN------------------------ 450
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
+I++ K + K+++ ++ G P +TY+++I+ YC +A K+
Sbjct: 451 -----SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLS 505
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
M G V Y +++ Y K R+ DA+ L +M++ G P++ YN ++ + +
Sbjct: 506 GMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTR 565
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAG 543
++L+ + + +Y ++ + + D ++ + + ++
Sbjct: 566 RTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFN 625
Query: 544 IMVGVFSKLSQIEELVKLLQDMKSEG 569
IM+ K+ + E L S G
Sbjct: 626 IMIDALLKVGRNGEAKDLFVAFSSNG 651
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/345 (18%), Positives = 140/345 (40%), Gaps = 10/345 (2%)
Query: 259 THMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFK 318
T + K LCD +S A E D + G D Y ++I F + A +
Sbjct: 162 TILLKGLCDE-NRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYH 220
Query: 319 EAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESM-KNAKLKISDCIS-CAIVNGFSK 376
E ++ + D ++ + ++K ++V+ SM KN + +C + +I++G+
Sbjct: 221 EMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMP--NCRTYTSIMHGYCS 278
Query: 377 RRGYWAAVKVYEQLISQGCIPGQV-----TYASIINAYCRIALYSKAEKVFIEMQQKGFD 431
A+ +++ S G P + TY +++ Y + M + G
Sbjct: 279 SGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIH 338
Query: 432 KCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKL 491
Y+ ++ Y K G++ +AM + +KM+ +G P+ Y +++ + ++ +
Sbjct: 339 PDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLY 398
Query: 492 WKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSK 551
+++M ++P + Y ++I +++ + E G ++ ++ K
Sbjct: 399 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 458
Query: 552 LSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
++ E KL M G K D Y + ++ AG +A L
Sbjct: 459 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKL 503
>gi|410110089|gb|AFV61124.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
macropoda]
Length = 427
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 168/355 (47%), Gaps = 7/355 (1%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 2 GLFDEMRQRALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLI 58
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A +F ++ G D ++ ++ + L + ++ MK A +
Sbjct: 59 ELSRKLCDYSKAISIFSRLKKSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVM 118
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++ + + + + A+ V+ ++ C+ T +I+ Y ++ + +A+K+
Sbjct: 119 PNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M++ G + VV+Y++++ +YG +A+ L M+ K E NV YNS+ ++G+
Sbjct: 179 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMXMIYGK 238
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ +
Sbjct: 239 TLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQIL 298
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M+ + + + +LL ++K + D +A++ L AG +A ++
Sbjct: 299 FQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYV 349
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 165/376 (43%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F+ + Y + +
Sbjct: 40 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKKSGFTPDLVAYNAMIN 94
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +MK G++ + Y++L+ + + A +F E E L
Sbjct: 95 VFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLL 154
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 155 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 214
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + VTY S+ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 215 RLMQRKNIEQNVVTYNSMXMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV 274
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + ++ +++ + RA + ++L E++R PD +
Sbjct: 275 GKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKR----PDNIPR 330
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ + SK + +V++ M+
Sbjct: 331 DTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRG 390
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 391 LGYFPDSDVIAIVLNA 406
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/437 (19%), Positives = 194/437 (44%), Gaps = 13/437 (2%)
Query: 101 YDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVA 160
Y ++E ++ P++ T LI + + +D+ +S + + V D S L+
Sbjct: 1 YGLFDEMRQRA-LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIE 59
Query: 161 SCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVL 219
+ + A ++ G L+A+N+ + + K ++ + +MK+AG++
Sbjct: 60 LSRKLCDYSKAISIFSRLKKSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMP 119
Query: 220 DSGCYCQIMEAYYKIGDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFE 277
++ Y ++ Y + + ++F E + K LD T + I+ D G+ G A E
Sbjct: 120 NTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCN-----IMIDVYGQLGMAKE 174
Query: 278 ALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL 337
A K F M++ GI + Y +L+ + A LF+ + K + ++ + +
Sbjct: 175 ADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMXM 234
Query: 338 MYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
+Y + EK ++++ M++ ++ + I++ + K A ++++L S G
Sbjct: 235 IYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEI 294
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
Q+ + ++I AY R L + A+++ E+++ + + + + GRI +A ++
Sbjct: 295 DQILFQTMIVAYERAGLVAHAKRLLHELKRPD----NIPRDTAIHILAGAGRIEEATYVF 350
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+ G ++ ++ ++ + + K V +++ +M PD V++AY +
Sbjct: 351 RQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKL 410
Query: 518 REFDMCVKFYNEFRMNG 534
+EFD Y E + G
Sbjct: 411 QEFDKANDVYMEMQEVG 427
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 180/419 (42%), Gaps = 29/419 (6%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
LI L++ + L + ++P+ T + ++ ++ K IA +L++ DG
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ +NS M G K + + + KM+ GI+ + Y +++ D +
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552
Query: 242 ALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
LF +E K D H Y +L D+L K+GRA EA F + KG+ Y +
Sbjct: 553 RLFEMMEQNGLKPDE-----HAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTT 604
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
LI F+ A L + ++G D L+ ++ + + L +++ M
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 664
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+K + +++ + + A ++Y ++ S G P TY IN+YC+ AE
Sbjct: 665 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 724
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM--- 476
+ ++M+++G VV Y+ ++ G G I A + +M CEPN W Y L+
Sbjct: 725 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 784
Query: 477 -----------DMHGRAKNLRQVEKLWKEMER---RKVTPDKVSYTTVISAYNRAREFD 521
D G NL +++ W+ +ER + P +Y+++I+ + +A +
Sbjct: 785 LKGNLAYVRSVDTSG-MWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLE 842
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 188/447 (42%), Gaps = 16/447 (3%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYST 205
+LPD T + ++ S + A+ ++ + G E N+ + GY +
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 237
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
++ M G + Y +++ K LFL K D + + L
Sbjct: 238 CWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKR---DGCSPNVRAFTFL 294
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
L KSGR +A F M + G++ Y ++I ++ + + A ++ + E+ G
Sbjct: 295 ISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGC 354
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA----IVNGFSKRRGYW 381
P+ L+Y GL ++ + E + N +K + ++NG+ +
Sbjct: 355 --HPDDWTYNTLIY---GLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 409
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+++ +++S C + +IN+ + +A+++ E+ G V+ Y+S++
Sbjct: 410 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSII 469
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y K+G++ A+ ++ M+ GC+PN W YNSLM + K L + L +M++ +
Sbjct: 470 DGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGII 529
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ ++YTT++ +FD + + NG D ++ K + EE
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAG 588
+ +G L + Y + ++ AG
Sbjct: 590 IV---RKGVALTKVYYTTLIDGFSKAG 613
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%)
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+VY QL+ G +P VTY ++I +YC+ + A + F + + G + +++V Y
Sbjct: 169 RVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGY 228
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+TG +R A WL M GC+ N + Y L+ AK +R+ L+ M+R +P+
Sbjct: 229 CRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNV 288
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
++T +IS ++ ++ NG V M+ +SKL ++ + +K+ +
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 348
Query: 565 MKSEGTKLDERLYHSAMNALRD 586
M+ G D+ Y++ + L D
Sbjct: 349 MEKNGCHPDDWTYNTLIYGLCD 370
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/473 (19%), Positives = 190/473 (40%), Gaps = 39/473 (8%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILV 208
P+ + L++ ++ + A L +G + +++ +N+ + GY+KL + +
Sbjct: 286 PNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI 345
Query: 209 YEKMKSAGIVLDSGCYCQIM---------EAYYKIGDSEK-----VAALFLE-----CKS 249
E M+ G D Y ++ EA + ++ K F C +
Sbjct: 346 KELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA 405
Query: 250 RKLDST------------PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
K D ++ L +SL K R EA + ++ G++ + Y
Sbjct: 406 EKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITY 465
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVESM 355
S+I + +V +A E+ K E G P LMY +++ + K + ++ M
Sbjct: 466 TSIIDGYCKSGKVDIALEVLKMMERDGC--QPNAWTYNSLMYGLVKDKKLHKAMALLTKM 523
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+ + + ++ G + A +++E + G P + YA + +A C+
Sbjct: 524 QKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG-- 581
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+AE+ + + +KG V Y++++ + K G A L+ +M +GC P+ + Y+ L
Sbjct: 582 -RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVL 640
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ + K L + + +M R + +YT +I R + D + YNE +G
Sbjct: 641 LHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH 700
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ + + K ++E+ L+ M+ EG D Y+ ++ G
Sbjct: 701 KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMG 753
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 132/329 (40%), Gaps = 38/329 (11%)
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD-------- 328
+A++ R + P Y + S A + ++ + + G+L D
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190
Query: 329 -------------------------PE--VCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
PE C LVL Y G + K + M +
Sbjct: 191 KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 250
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
++ ++ G + A+ ++ + GC P + +I+ C+ A +
Sbjct: 251 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 310
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M Q G V+ Y++M+ Y K GR+ DA+ + M+ GC P+ W YN+L ++G
Sbjct: 311 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL--IYGL 368
Query: 482 A-KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+ + E+L + TP V++T +I+ Y A +FD ++ N+ + +D
Sbjct: 369 CDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQ 428
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ G ++ K +++E +LL ++ + G
Sbjct: 429 VFGKLINSLIKKDRLKEAKELLNEISANG 457
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 165/406 (40%), Gaps = 40/406 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+A ++S ++G++KD + + A + +K P T L++ +D+
Sbjct: 495 PNAWTYNSLMYGLVKDKKLHK-AMALLTKMQK-DGIIPNVITYTTLLQGQCDEHDFDNAF 552
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL--LAFNSAMGG 195
L E + + PD H + L + +A + + A + FI +AL + + + + G
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYS----FIVRKGVALTKVYYTTLIDG 608
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
++K + E+M G DS Y ++ A K + + + R + T
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
F+ Y IL D + + G+ A + + +M G + Y I S+ ++ AE+
Sbjct: 669 IFA---YTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 725
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L + E +G+ D L+ G +++ ++ M A SC
Sbjct: 726 LILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGA--------SC------- 770
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE-----KVFIEMQQKGF 430
YW + + L+ G + Y ++ +++ E ++ M + G
Sbjct: 771 -EPNYWTYCLLLKHLLK-----GNLAYVRSVDTS---GMWNLIELDITWQLLERMVKHGL 821
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ V YSS++A + K GR+ +A L+ M KG PN IY L+
Sbjct: 822 NPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 867
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 87/437 (19%), Positives = 160/437 (36%), Gaps = 78/437 (17%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ ++G L D +T+E A + N A K F P T LI ++K+D +
Sbjct: 356 PDDWTYNTLIYG-LCDQKTEE-AEELLNNAVK-EGFTPTVVTFTNLINGYCMAEKFDDAL 412
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
+ D +L+ S ++ + K A LL
Sbjct: 413 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLN--------------------- 451
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
++ + G+V + Y I++ Y K G KV K + D
Sbjct: 452 -------------EISANGLVPNVITYTSIIDGYCKSG---KVDIALEVLKMMERDGCQP 495
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ Y L L K + +A+ M++ GI+ + Y +L+ + A LF
Sbjct: 496 NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 555
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+ E+ G+ D L + G E+ + A K+ +++GFSK
Sbjct: 556 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKV---YYTTLIDGFSKA 612
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A + E++I +GC P TY+ +++A C
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALC--------------------------- 645
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
K R+ +A+ ++ +M +G + ++ Y L+D R ++++ EM
Sbjct: 646 --------KQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 697
Query: 498 RKVTPDKVSYTTVISAY 514
P +YT I++Y
Sbjct: 698 SGHKPSATTYTVFINSY 714
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 179/438 (40%), Gaps = 43/438 (9%)
Query: 100 AYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLV 159
A Y+N + P T +L+ L ++ K + + E+ PD S L+
Sbjct: 182 AVSYFNSVSP-NKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLI 240
Query: 160 ASCVRARKFKIANTLLQVFITDGEIAL-LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
+A + A L+ + + G +A+ S + G K + ++M+ +
Sbjct: 241 DGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLR 300
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
Y I+ Y +G EK A+ E R D P T Y + ++L GR EA
Sbjct: 301 PRVDTYSFIVTGYIGMGKVEKAFAVMEEMADR--DCAP-DTISYTMFIEALYSIGRREEA 357
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
K F M EKG D Y +I +F
Sbjct: 358 EKVFETMVEKGCKPDMHTYGIIIDNFC--------------------------------- 384
Query: 339 YIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPG 398
+EG + V+ M A +K + I I++GF K A+++Y++++ G +P
Sbjct: 385 --KEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPS 442
Query: 399 QVTYASIINAYCRIALYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYGKTGRIRDAMWL 456
VTY ++INA C++ +A ++ EMQ++ + +V YS ++ GK G A L
Sbjct: 443 TVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDL 502
Query: 457 VAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNR 516
+A+M G P+ + Y SL+ A + + +L +EM + + PD +Y T++ R
Sbjct: 503 LAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR 562
Query: 517 AREFDMCVKFYNEFRMNG 534
+ + D E NG
Sbjct: 563 S-DVDAAWDLLQEMMRNG 579
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 184/437 (42%), Gaps = 7/437 (1%)
Query: 154 TCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMK 213
T + L+ + VR A Q I++ ++ +FN + G+ + + +MK
Sbjct: 98 TRNSLLLALVRGGHLSDALGFFQSSISEPNVS--SFNILLRGFAARDDFEVVNALLREMK 155
Query: 214 SAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSG 273
S GI + + I+ A D +K + F K + T F+ Y +L D L K+
Sbjct: 156 SRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFT---YTVLVDGLCKAH 212
Query: 274 RAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCL 333
+ A F +M KG D Y+SLI + V A +L +G
Sbjct: 213 KVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYT 272
Query: 334 KLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ 393
+V + G +++ + ++ M+ +L+ IV G+ A V E++ +
Sbjct: 273 SIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADR 332
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
C P ++Y I A I +AEKVF M +KG + Y ++ + K G + A
Sbjct: 333 DCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAA 392
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
++ M +PN +IY +MD ++ L + +L++ + + + P V+Y TVI+A
Sbjct: 393 THVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINA 452
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIA--GIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+ ++ D ++ E + ++ +I +++ K+ E LL +M G
Sbjct: 453 LCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVI 512
Query: 572 LDERLYHSAMNALRDAG 588
D Y S + L AG
Sbjct: 513 PDCFTYTSLIQTLAGAG 529
>gi|410110095|gb|AFV61127.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
montevidensis]
Length = 418
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 160/335 (47%), Gaps = 4/335 (1%)
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y L GK G AL + + M++ + D +Y++LI + + A +F +
Sbjct: 2 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 61
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
G D ++ ++ + L + ++ MK A + + ++ + + + +
Sbjct: 62 RSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKFL 121
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++++
Sbjct: 122 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLL 181
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
+YG +A+ L M+ K E NV YNS+M ++G+ + L +EM+ R +
Sbjct: 182 RVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 241
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + + +L
Sbjct: 242 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRL 301
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
L ++K + D +A++ L AG +A ++
Sbjct: 302 LHELK----RPDNIPRDTAIHILAGAGRIEEATYV 332
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 167/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F+ + Y + +
Sbjct: 23 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKRSGFTPDLVAYNAMIN 77
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +MK G++ + + Y++L+ + + A +F E E L
Sbjct: 78 VFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLL 137
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 138 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 197
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 198 RLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV 257
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + ++ +++ + RA + ++L E++R PD +
Sbjct: 258 GKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKR----PDNIPR 313
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ + SK + +V++ M+
Sbjct: 314 DTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRG 373
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 374 LGYFPDSDVIAIVLNA 389
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 104/208 (50%), Gaps = 9/208 (4%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
TY+++I + + L+ A +M+Q +V YS+++ + K A+ + +++
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
K G P++ YN+++++ G+AK R+ L EM+ V P+ SY+T+++ Y ++F
Sbjct: 61 KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKF 120
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSA 580
+ ++E R ++D IM+ V+ +L +E KL M+ G + + Y++
Sbjct: 121 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 180
Query: 581 MNALRDAGL---------QMQAQWLQQN 599
+ DA L MQ + ++QN
Sbjct: 181 LRVYGDAELFGEAIHLFRLMQRKNIEQN 208
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 164/353 (46%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +MK+AG++ ++ Y ++ Y + + ++F
Sbjct: 69 LVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFS 128
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 129 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 183
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K + ++ ++++Y + EK ++++ M++ ++ +
Sbjct: 184 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPN 243
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G Q+ + ++I AY R L + A+++
Sbjct: 244 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLH 303
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+++ + + + + GRI +A ++ + G ++ ++ ++ + + K
Sbjct: 304 ELKRPD----NIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYK 359
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
V +++ +M PD V++AY + +EFD Y E + G V
Sbjct: 360 KYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGCV 412
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 139/318 (43%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 102 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 161
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ I + Y +M Y K
Sbjct: 162 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 221
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E +SR ++ + Y + GK G+ A F+ ++ G D
Sbjct: 222 TLEHEKANNLIQEMQSRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGXEID 278
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
++ ++I ++ V A+ L E L+ P+ + ++I G +E+ V
Sbjct: 279 QILFQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDTAIHILAGAGRIEEATYV 332
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ SK + Y V+V++++ G P A ++NAY +
Sbjct: 333 FRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGK 392
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 393 LQEFDKANDVYMEMQEVG 410
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 35/204 (17%)
Query: 196 YNKLHMYYSTILVYEK-------MKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
YN + M Y L +EK M+S GI +S Y I+ + K+G ++ A LF + +
Sbjct: 212 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 271
Query: 249 S--RKLDSTPFST------------HMYKILCD--------------SLGKSGRAFEALK 280
S ++D F T H ++L + L +GR EA
Sbjct: 272 SSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATY 331
Query: 281 FFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI 340
FR + G ++D +++ +I + + E+F + G D +V ++ Y
Sbjct: 332 VFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYG 391
Query: 341 EEGLVEKTLDVVESMKNAKLKISD 364
+ +K DV M+ SD
Sbjct: 392 KLQEFDKANDVYMEMQEVGCVFSD 415
>gi|255661188|gb|ACU25763.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 426
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 160/337 (47%), Gaps = 4/337 (1%)
Query: 260 HMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKE 319
+ Y L GK G AL + + M++ + D +Y++LI + + A +F
Sbjct: 10 YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSR 69
Query: 320 AEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRG 379
+ G D ++ ++ + L + ++ M+ A + + ++ + + +
Sbjct: 70 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKK 129
Query: 380 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
+ A+ V+ ++ C+ T +I+ Y ++ + +A+K+F M++ G + VV+Y++
Sbjct: 130 FLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ +YG +A+ L M+ K NV YNS+M ++G+ + L +EM+ R
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
+ P+ ++Y+T+IS + + + D + + R +G ID+ + M+ + + +
Sbjct: 250 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAK 309
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+LL ++KS D +A++ L AG +A ++
Sbjct: 310 RLLHELKSP----DNIPRDTAIHILAGAGRIEEATYV 342
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 149/314 (47%), Gaps = 6/314 (1%)
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLV 345
+++ + D Y++LI F A ++ E+ + D + L+ + +
Sbjct: 1 RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 346 EKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASI 405
K + + +K + A++N F K + + A + ++ + G +P +Y+++
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTL 120
Query: 406 INAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS---MVAMYGKTGRIRDAMWLVAKMKA 462
+ Y + +A VF EM++ KC++ ++ M+ +YG+ G ++A L M+
Sbjct: 121 LTMYVENKKFLEALSVFSEMREI---KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 177
Query: 463 KGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
G EPNV YN+L+ ++G A+ + L++ M+R+ + + V+Y +++ Y + E +
Sbjct: 178 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEK 237
Query: 523 CVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
E + G + ++ ++ K+ +++ L Q ++S G ++D+ LY + +
Sbjct: 238 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIV 297
Query: 583 ALRDAGLQMQAQWL 596
A AGL A+ L
Sbjct: 298 AYERAGLVAHAKRL 311
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 169/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F+ + Y + +
Sbjct: 33 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKRSGFTPDLVAYNAMIN 87
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +M+ G++ + + Y++L+ + + A +F E E L
Sbjct: 88 VFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLL 147
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + G+ ++ + M+ ++ + ++ + + A+ ++
Sbjct: 148 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 207
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + + VTY S++ Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 208 RLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKV 267
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + +Y +++ + RA + ++L E++ +PD +
Sbjct: 268 GKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK----SPDNIPR 323
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ +FSK + L+++ M+
Sbjct: 324 DTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANLIEVFDKMRG 383
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 384 LGYFPDSNVIALVLNA 399
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 164/353 (46%), Gaps = 11/353 (3%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +M++AG++ ++ Y ++ Y + + ++F
Sbjct: 79 LVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFS 138
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ G A EA K F M++ GI + Y +L+
Sbjct: 139 EMREIKCLLDLTTCN-----IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRV 193
Query: 304 FASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKIS 363
+ A LF+ + K ++++ ++++Y + EK ++++ M+N ++ +
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPN 253
Query: 364 DCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFI 423
I++ + K A ++++L S G QV Y ++I AY R L + A+++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 424 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAK 483
E+ K D + + + + GRI +A ++ + G ++ ++ ++ + + K
Sbjct: 314 EL--KSPDN--IPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYK 369
Query: 484 NLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+ +++ +M PD V++AY + EFD Y E + G V
Sbjct: 370 KYANLIEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVGCV 422
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 142/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++N+ + Y ++ I ++ M+ IV + Y +M Y K
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGK 231
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E ++R ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 288
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
+Y ++I ++ V A+ L E L+ P+ + ++I G +E+ V
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHE------LKSPDNIPRDTAIHILAGAGRIEEATYV 342
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ FSK + Y ++V++++ G P A ++NAY +
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYANLIEVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 403 LHEFDKANGVYMEMQEVG 420
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/451 (19%), Positives = 204/451 (45%), Gaps = 5/451 (1%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTI 206
++P+ T S L+ + ++ A +L+ + G + +N + GY+ M+ ++
Sbjct: 255 IMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESV 314
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
V+++M S+ +V D G M A K G ++ +F S L Y L
Sbjct: 315 RVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIF---DSMVLKGPKPDVISYGALL 371
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+G F M +G++ D ++ +LI ++A + + + +F++ ++G+
Sbjct: 372 HGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVN 431
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D ++ + G ++ ++ M + + + ++ G RR A ++
Sbjct: 432 PDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKEL 491
Query: 387 YEQLISQGCIPGQVTY-ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++S+G P + + SIIN C+ ++ + V + G ++ ++S+V Y
Sbjct: 492 ISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYC 551
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
G +++A+ L+ M++ G EP+++ YN+L+D + + + L+++M ++VT V
Sbjct: 552 LVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSV 611
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
SY ++ +AR + + ++E +G + ++G + + +E LL+ +
Sbjct: 612 SYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 671
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
S K D ++ + A+ G + +A+ L
Sbjct: 672 FSMNVKFDILTFNIVIRAMFKVGRRQEAKEL 702
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 148/312 (47%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ + Y IL + ++ R L F + G+ D Y +LI F+ EV A +LF
Sbjct: 188 TIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLF 247
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+ EE+G++ + L+ + ++K V+ M A ++ ++ +++G+S
Sbjct: 248 YKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTS 307
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
+ +V+V++++ S +P S + A C+ +A +F M KG V++Y
Sbjct: 308 GMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISY 367
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+++ Y G I L M +G P+ ++N+L++ + R + + ++++M +
Sbjct: 368 GALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTK 427
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ V PD ++++TVISA+ R D ++ +N G D A+ ++ + +
Sbjct: 428 QGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVK 487
Query: 558 LVKLLQDMKSEG 569
+L+ DM S+G
Sbjct: 488 AKELISDMLSKG 499
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 104/219 (47%), Gaps = 6/219 (2%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
A+++GFSK A ++ ++ QG +P VTY+S+IN C+ KAE+V +M
Sbjct: 229 ALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGA 288
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM---HGRAKNL 485
G + Y+ ++ Y +G ++++ + +M + P+V NS M HGR K
Sbjct: 289 GVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEA 348
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
R + + M + PD +SY ++ Y A +N G V DR + +
Sbjct: 349 RDI---FDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTL 405
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ +++L +++ + + +DM +G D + + ++A
Sbjct: 406 INAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAF 444
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/575 (18%), Positives = 225/575 (39%), Gaps = 101/575 (17%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKL------PEFRPEKSTLKLLIRYL 127
Q +P+ + S ++G+ K T+E+ ++A+++ RP T LI
Sbjct: 253 QGIMPNVVTYSSLINGLCK---TKEM-----DKAERVLRQMVGAGVRPNNMTYNCLIHGY 304
Query: 128 VQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIAL 186
S W V + ++ ++PD C+ + + + + K A + + G + +
Sbjct: 305 STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDV 364
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+++ + + GY ++ M G+V D + ++ AY ++G +K +F +
Sbjct: 365 ISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFED 424
Query: 247 CKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ + D FST + + + GR +A++ F M + G+ D ++Y+ LI
Sbjct: 425 MTKQGVNPDIITFST-----VISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQ 479
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI----EEGLVEKTLDVVESMKNAKL 360
+ ++ A+EL + KG+ P C+K I +EG V + DVV+ + +
Sbjct: 480 CNRRDLVKAKELISDMLSKGI---PPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQ 536
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC---------- 410
+ + ++V+G+ AV + + + S G P TY ++++ YC
Sbjct: 537 RPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALT 596
Query: 411 --------RIALYSK-----------------AEKVFIEMQQKGFDKCVVAYSSMV---- 441
R+ L S A+++F EM + G + Y++++
Sbjct: 597 LFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLC 656
Query: 442 --------------------------------AMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
AM+ K GR ++A L A + G P +
Sbjct: 657 RNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMF-KVGRRQEAKELFAAISTYGLVPTI 715
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
Y ++ + ++ + L+ ME+ TPD +I E + ++
Sbjct: 716 LTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSK 775
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
G + + +++ +FS + E +KLL +
Sbjct: 776 IDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 810
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 101/223 (45%), Gaps = 6/223 (2%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++N + + R + V+ +L+ G P +Y ++I+ + + KA +F +M+++G
Sbjct: 195 LINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQG 254
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
VV YSS++ KT + A ++ +M G PN YN L+ + + ++
Sbjct: 255 IMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESV 314
Query: 490 KLWKEMERRKVTPDKV---SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+++KEM + PD S+ T + + R +E ++ + G D G ++
Sbjct: 315 RVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKE---ARDIFDSMVLKGPKPDVISYGALL 371
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
++ I + L M EG D ++++ +NA G+
Sbjct: 372 HGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGM 414
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 3/209 (1%)
Query: 383 AVKVYEQLISQGC---IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
AV++++++ C P TY +IN Y R VF + + G V +Y++
Sbjct: 170 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 229
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ + K G + A L KM+ +G PNV Y+SL++ + K + + E++ ++M
Sbjct: 230 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 289
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
V P+ ++Y +I Y+ + + V+ + E + V D + K +I+E
Sbjct: 290 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 349
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ M +G K D Y + ++ AG
Sbjct: 350 DIFDSMVLKGPKPDVISYGALLHGYATAG 378
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 116/521 (22%), Positives = 216/521 (41%), Gaps = 57/521 (10%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +LI L S + ++L + K P+ HT + L+ + K A +
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356
Query: 175 LQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L G I +++ +N+ + GY K M + + M+S ++ Y +++ K
Sbjct: 357 LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCK 416
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTH--------------------------------M 261
K AL + RKL + + +
Sbjct: 417 KRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWT 476
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y + D+L K GR EA F +K KG+ + IY +LI + + ++ +A L +
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER-- 534
Query: 322 EKGMLRDPEVCLKLVLMY--IEEGL-----VEKTLDVVESMKNAKLKISDCISCAIVNGF 374
ML D CL Y + EGL +++ +V M +K + ++
Sbjct: 535 ---MLND--ACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEM 589
Query: 375 SKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCV 434
K + A+KV+ ++S G P TY + ++AY + + + V +M ++G +
Sbjct: 590 LKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDL 649
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
V Y+ ++ Y + G A + M GC+P+++I + L+ KNL E KE
Sbjct: 650 VTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI------KNLSH-ENRMKE 702
Query: 495 MERRKVTPDKVSYTTVISAYN--RAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKL 552
R ++ D VS + + + E+++ +K + + +G ID +I G ++ F +
Sbjct: 703 T-RSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQ 761
Query: 553 SQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
++EE L+ MK G E +Y+S ++ G+ +A
Sbjct: 762 ERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEA 802
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 149/400 (37%), Gaps = 73/400 (18%)
Query: 189 FNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECK 248
FN+ + GY K+ L K+ AG+ D+ Y ++ + + + +FL
Sbjct: 197 FNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMP 256
Query: 249 SRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASIT 308
+ S Y L L ++GR EALK F DM E Y LI + +
Sbjct: 257 QKGCQRNEVS---YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSG 313
Query: 309 EVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISC 368
A LF E +EKG +P V VL
Sbjct: 314 RKVEALNLFNEMKEKGC--EPNVHTYTVL------------------------------- 340
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++G K A K+ ++ +G IP VTY ++I+ YC
Sbjct: 341 --IDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC------------------ 380
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
K G I DA ++ M++ C PN YN L+ + + + +
Sbjct: 381 -----------------KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKA 423
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGV 548
L +M RK++P ++Y ++I + + + + + NG V D+ + +
Sbjct: 424 MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDT 483
Query: 549 FSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
K ++EE L +K++G K +E +Y + ++ G
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 94/495 (18%), Positives = 185/495 (37%), Gaps = 51/495 (10%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + + G+ K+ + +EA+K+ EK + ++ Y +
Sbjct: 332 PNVHTYTVLIDGLCKE--------NKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEG 383
Query: 138 SLSEDFKIYNVL------PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFN 190
+ + F+I +++ P+ T + L+ + RK A LL + +L+ +N
Sbjct: 384 MIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYN 443
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
S + G K++ S + M G+V D Y ++ K G E+ LF K++
Sbjct: 444 SLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK 503
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ + +Y L D K G+ A M L + Y LI ++
Sbjct: 504 GVKANEV---IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISC 368
K A L + G+ P V +L+ +++G + L V M + + C
Sbjct: 561 KEASSLVAKMLTMGV--KPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
A ++ + + V ++ +G +P VTY +I+ Y R+ L +A M
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRD-----------------------------AMWLVAK 459
G + S ++ R+++ A+ L K
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEK 738
Query: 460 MKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
M GC +V IY +L+ + + L + + L M+ R ++P + Y +++ +
Sbjct: 739 MVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGV 798
Query: 520 FDMCVKFYNEFRMNG 534
+ V+ + NG
Sbjct: 799 YAEAVRLVDAMVENG 813
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 183/412 (44%), Gaps = 11/412 (2%)
Query: 116 EKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLL 175
E+ + + I L +S D S ++ K + L + + + L+ + + ++ A L
Sbjct: 65 ERHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLF 124
Query: 176 QVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKI 234
G + +N+ +GG ++ YE++ S+G Y +++ + K
Sbjct: 125 GEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKA 184
Query: 235 GDSEKVAALFLECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILE 292
+ L E +R + S P Y + D+L K G+ EA FF M++ G+
Sbjct: 185 DRVPEAVELLNELVARGGVVTSAP-----YNCIIDTLFKKGKIHEAELFFNRMEKDGVRP 239
Query: 293 DPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV 352
+ LI V A+E+F E G +C L+ + + G V++ +
Sbjct: 240 QEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIF 299
Query: 353 ESMKNAKLKISDCISCAI-VNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
E M N +D +SC I +NG K + A +V+E+++ + P VTY++ ++ CR
Sbjct: 300 ELMTNRGCTPND-VSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCR 358
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV-AKMKAKGCEPNVW 470
+A +V + KG VV Y+++++ GR+ +A + M+A GC PN +
Sbjct: 359 AHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNF 418
Query: 471 IYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDM 522
N L++ G A L + +L++ R V PD +++ + + + +D+
Sbjct: 419 TCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMANNTAKTEGWDI 470
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 157/345 (45%), Gaps = 3/345 (0%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+T Y IL ++ K+ R EA++ F +MK G S Y +LI + + A++ +
Sbjct: 100 NTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFY 159
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVV-ESMKNAKLKISDCISCAIVNGFSK 376
+ G LV + + V + ++++ E + + S +C I F K
Sbjct: 160 ERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKK 219
Query: 377 RRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVA 436
+ + A + + ++ G P +VT+ +I+ C+ ++A+++F + G VV
Sbjct: 220 GKIHEAEL-FFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVI 278
Query: 437 YSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEME 496
S ++ + K G + +A + M +GC PN N L++ +AK L Q ++++E+
Sbjct: 279 CSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVV 338
Query: 497 RRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIE 556
+R+ PD V+Y+T + RA D + GG D + ++ L +++
Sbjct: 339 KRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLD 398
Query: 557 ELVKLLQ-DMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQNF 600
E K+ + DM++ G + + +N AG +A+ L Q F
Sbjct: 399 EARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRF 443
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 149/334 (44%), Gaps = 11/334 (3%)
Query: 264 ILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE-- 321
+LC L G+ EAL+ F + G + A L+ +++ AEE K +
Sbjct: 6 VLC--LCHVGKLDEALELFHSLVSDGC----GLPADLL--VRELSKAGRAEECLKVVKLM 57
Query: 322 -EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGY 380
++ LR+ + + + +++K + +K+ + ++ ++N F K +
Sbjct: 58 LDRQQLRERHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRI 117
Query: 381 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSM 440
A++++ ++ + GC P TY ++I CR+ +A++ + + G + Y+ +
Sbjct: 118 DEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNIL 177
Query: 441 VAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKV 500
V + K R+ +A+ L+ ++ A+G YN ++D + + + E + ME+ V
Sbjct: 178 VDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGV 237
Query: 501 TPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVK 560
P +V++T +I +A + + + +GG I ++ F K ++E +
Sbjct: 238 RPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWR 297
Query: 561 LLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQ 594
+ + M + G ++ + +N L A QA+
Sbjct: 298 IFELMTNRGCTPNDVSCNILINGLCKAKRLSQAR 331
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 155/376 (41%), Gaps = 35/376 (9%)
Query: 253 DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKL 312
D+ + Y +L +L SGR EAL F +MKEKG + Y LI ++
Sbjct: 293 DNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDE 352
Query: 313 AEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVE---KTLDVVES--------------- 354
A ++ E EKG++ L+ Y +EG+++ + LD++ES
Sbjct: 353 ARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELIC 412
Query: 355 -----------------MKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIP 397
M KL S ++++G K +A ++ + G +P
Sbjct: 413 GLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVP 472
Query: 398 GQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLV 457
Q TY+ I+ C+ +A +F ++ KG V Y++++ Y K G+I A L+
Sbjct: 473 DQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLL 532
Query: 458 AKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRA 517
+M C PN + YN L++ + K +++ L +M V P V+YT +I +
Sbjct: 533 ERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKD 592
Query: 518 REFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLY 577
FD +K +N G D + + +EE+ ++ M EG D Y
Sbjct: 593 GAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTY 652
Query: 578 HSAMNALRDAGLQMQA 593
++ GL +A
Sbjct: 653 TVLIDGYARLGLTHRA 668
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 112/515 (21%), Positives = 211/515 (40%), Gaps = 50/515 (9%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P T +LI L S + ++L + K P+ HT + L+ + K A +
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356
Query: 175 LQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
L G I +++ +N+ + GY K M + + M+S ++ Y +++ K
Sbjct: 357 LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCK 416
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTH--------------------------------M 261
K AL + RKL + + +
Sbjct: 417 KRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWT 476
Query: 262 YKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAE 321
Y + D+L K GR EA F +K KG+ + IY +LI + + ++ +A L +
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536
Query: 322 EKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYW 381
L + L+ +E +++ +V M +K + ++ K +
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+KV+ ++S G P TY + ++AY + + + V +M ++G +V Y+ ++
Sbjct: 597 HALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y + G A + M GC+P+++I + L+ KNL E KE R ++
Sbjct: 657 DGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI------KNLSH-ENRMKE-TRSEIG 708
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
D VS T E+++ +K + + +G ID +I G ++ F + ++EE L
Sbjct: 709 IDSVSNTL---------EYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGL 759
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
+ MK G E +Y+S ++ G+ +A L
Sbjct: 760 VHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRL 794
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 149/401 (37%), Gaps = 73/401 (18%)
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
FN+ + GY K+ L K+ AG+ D+ Y ++ + + + +FL
Sbjct: 196 TFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIM 255
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
+ S Y L L ++GR EALK F DM E Y LI + +
Sbjct: 256 PQKGCQRNEVS---YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGS 312
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
A LF E +EKG +P V VL
Sbjct: 313 GRKVEALNLFNEMKEKGC--EPNVHTYTVL------------------------------ 340
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++G K A K+ ++ +G IP VTY ++I+ YC
Sbjct: 341 ---IDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC----------------- 380
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
K G I DA ++ M++ C PN YN L+ + + + +
Sbjct: 381 ------------------KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHK 422
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVG 547
L +M RK++P ++Y ++I + + + + + NG V D+ + +
Sbjct: 423 AMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFID 482
Query: 548 VFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
K ++EE L +K++G K +E +Y + ++ G
Sbjct: 483 TLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 107/570 (18%), Positives = 206/570 (36%), Gaps = 75/570 (13%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+ + + G+ K+ + +EA+K+ EK + ++ Y +
Sbjct: 332 PNVHTYTVLIDGLCKENKM--------DEARKMLSEMSEKGLIPSVVTYNALIDGYCKEG 383
Query: 138 SLSEDFKIYNVL------PDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFN 190
+ + F+I +++ P+ T + L+ + RK A LL + +L+ +N
Sbjct: 384 MIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYN 443
Query: 191 SAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSR 250
S + G K++ S + M G+V D Y ++ K G E+ LF K++
Sbjct: 444 SLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK 503
Query: 251 KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEV 310
+ + +Y L D K G+ A M L + Y LI ++
Sbjct: 504 GVKANEV---IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560
Query: 311 KLAEELFKEAEEKGMLRDPEVCLKLVLM--YIEEGLVEKTLDVVESMKNAKLKISDCISC 368
K A L + G+ P V +L+ +++G + L V M + + C
Sbjct: 561 KEASSLVAKMLTMGV--KPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIAL-------------- 414
A ++ + + V ++ +G +P VTY +I+ Y R+ L
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678
Query: 415 ---------------------------------------YSKAEKVFIEMQQKGFDKCVV 435
Y A K+F +M + G V
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVS 738
Query: 436 AYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
Y +++A + + R+ +A LV MK +G P+ IYNSL+D + + +L M
Sbjct: 739 IYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAM 798
Query: 496 ERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQI 555
+ P SY ++ + ++ G D +++ K +
Sbjct: 799 VENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLV 858
Query: 556 EELVKLLQDMKSEGTKLDERLYHSAMNALR 585
+E +L+ M+ +G + + Y + L
Sbjct: 859 DECSELIDIMEEKGCQPNPLTYSLLIEGLE 888
>gi|410110137|gb|AFV61148.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rubella]
Length = 440
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 168/355 (47%), Gaps = 7/355 (1%)
Query: 242 ALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI 301
LF E + R L ++ Y L GK G AL + + M++ + D +Y++LI
Sbjct: 1 GLFDEMRQRALSPDRYT---YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLI 57
Query: 302 CSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
+ + A +F + G D ++ ++ + L + ++ MK A +
Sbjct: 58 ELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVM 117
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
+ ++ + + + + A+ V+ ++ C+ T +I+ Y ++++ +A+K+
Sbjct: 118 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKL 177
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M++ G + VV++++++ +YG +A+ L M+ K E V YNS++ ++G+
Sbjct: 178 FWGMRKMGIEPSVVSFNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYGK 237
Query: 482 AKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAI 541
+ L +EM+ R + P+ ++Y+T+IS + + + D + + R +G ID+ +
Sbjct: 238 TLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQIL 297
Query: 542 AGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
M+ + + + +LL ++K + D +A++ L AG +A ++
Sbjct: 298 FQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYV 348
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 166/376 (44%), Gaps = 11/376 (2%)
Query: 210 EKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHM--YKILCD 267
+KM+ + D Y ++E K+ D K ++F +L + F+ + Y + +
Sbjct: 39 QKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF-----SRLKRSGFTPDLVAYNAMIN 93
Query: 268 SLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLR 327
GK+ EA +MK G++ + + Y++L+ + + A +F E E L
Sbjct: 94 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLL 153
Query: 328 DPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVY 387
D C ++ +Y + + ++ + M+ ++ S ++ + + A+ ++
Sbjct: 154 DLTTCNIMIDVYGQLSMAKEADKLFWGMRKMGIEPSVVSFNTLLRVYGDAELFGEAIHLF 213
Query: 388 EQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 447
+ + VTY S+I Y + + KA + EMQ +G + + YS++++++GK
Sbjct: 214 RLMQRKNIEQTVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV 273
Query: 448 GRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSY 507
G++ A L K+++ G E + ++ +++ + RA + ++L E++R PD +
Sbjct: 274 GKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKR----PDNIPR 329
Query: 508 TTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKS 567
T I A + + + G V D + M+ + SK + +V++ M+
Sbjct: 330 DTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRG 389
Query: 568 EGTKLDERLYHSAMNA 583
G D + +NA
Sbjct: 390 LGYFPDSNVIAVVLNA 405
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 166/360 (46%), Gaps = 25/360 (6%)
Query: 186 LLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFL 245
L+A+N+ + + K ++ + +MK+AG++ ++ Y ++ Y + + ++F
Sbjct: 85 LVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFS 144
Query: 246 ECKSRK--LDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICS 303
E + K LD T + I+ D G+ A EA K F M++ GI +PS+ S
Sbjct: 145 EMREIKCLLDLTTCN-----IMIDVYGQLSMAKEADKLFWGMRKMGI--EPSV-----VS 192
Query: 304 FASITEVKLAEELFKEA-------EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
F ++ V ELF EA + K + + ++++Y + EK ++++ M+
Sbjct: 193 FNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYGKTLEHEKANNLIQEMQ 252
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
+ ++ + I++ + K A ++++L S G Q+ + ++I AY R L +
Sbjct: 253 SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVA 312
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
A+++ E+++ + + + + GRI +A ++ + G ++ ++ ++
Sbjct: 313 HAKRLLHELKRPD----NIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMI 368
Query: 477 DMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+ + K V +++ +M PD V++AY + +EFD Y E + G V
Sbjct: 369 HLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVGCV 428
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 140/318 (44%), Gaps = 12/318 (3%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P ++ L+ V++KK+ +S+ + + L D TC+ ++ + K A+ L
Sbjct: 118 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKL 177
Query: 175 LQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYK 233
G E ++++FN+ + Y ++ I ++ M+ I Y ++ Y K
Sbjct: 178 FWGMRKMGIEPSVVSFNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYGK 237
Query: 234 IGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILED 293
+ EK L E +SR ++ + Y + GK G+ A F+ ++ G+ D
Sbjct: 238 TLEHEKANNLIQEMQSRGIEPNSIT---YSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 294
Query: 294 PSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI--EEGLVEKTLDV 351
++ ++I ++ V A+ L E L+ P+ + ++I G +E+ V
Sbjct: 295 QILFQTMIVAYERAGLVAHAKRLLHE------LKRPDNIPRDTAIHILAGAGRIEEATYV 348
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+A + +++ SK + Y V+V++++ G P A ++NAY +
Sbjct: 349 FRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGK 408
Query: 412 IALYSKAEKVFIEMQQKG 429
+ + KA V++EMQ+ G
Sbjct: 409 LQEFDKANDVYMEMQEVG 426
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 8/195 (4%)
Query: 171 ANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIME 229
AN L+Q + G E + +++ + + K+ ++++K++S+G+ +D + ++
Sbjct: 244 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIV 303
Query: 230 AYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKG 289
AY + G L E K + D+ P T ++ L +GR EA FR + G
Sbjct: 304 AYERAGLVAHAKRLLHELK--RPDNIPRDTAIH-----ILAGAGRIEEATYVFRQAIDAG 356
Query: 290 ILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTL 349
++D +++ +I + + E+F + G D V ++ Y + +K
Sbjct: 357 EVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKAN 416
Query: 350 DVVESMKNAKLKISD 364
DV M+ SD
Sbjct: 417 DVYMEMQEVGCVFSD 431
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 180/419 (42%), Gaps = 29/419 (6%)
Query: 123 LIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG 182
LI L++ + L + ++P+ T + ++ ++ K IA +L++ DG
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492
Query: 183 -EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVA 241
+ +NS M G K + + + KM+ GI+ + Y +++ D +
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552
Query: 242 ALF--LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYAS 299
LF +E K D H Y +L D+L K+GRA EA F + KG+ Y +
Sbjct: 553 RLFEMMEQNGLKPDE-----HAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTT 604
Query: 300 LICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAK 359
LI F+ A L + ++G D L+ ++ + + L +++ M
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 664
Query: 360 LKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE 419
+K + +++ + + A ++Y ++ S G P TY IN+YC+ AE
Sbjct: 665 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 724
Query: 420 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM--- 476
+ ++M+++G VV Y+ ++ G G I A + +M CEPN W Y L+
Sbjct: 725 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 784
Query: 477 -----------DMHGRAKNLRQVEKLWKEMER---RKVTPDKVSYTTVISAYNRAREFD 521
D G NL +++ W+ +ER + P +Y+++I+ + +A +
Sbjct: 785 LKGNLAYVRSVDTSG-MWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLE 842
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/447 (20%), Positives = 189/447 (42%), Gaps = 16/447 (3%)
Query: 147 NVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYST 205
+LPD T + ++ S + A+ ++ + G E N+ + GY +
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 237
Query: 206 ILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKIL 265
++ M G + Y +++ + + LFL K D + + L
Sbjct: 238 CWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKR---DGCSPNVRAFTFL 294
Query: 266 CDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGM 325
L KSGR +A F M + G++ Y ++I ++ + + A ++ + E+ G
Sbjct: 295 ISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGC 354
Query: 326 LRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCA----IVNGFSKRRGYW 381
P+ L+Y GL ++ + E + N +K + ++NG+ +
Sbjct: 355 --HPDDWTYNTLIY---GLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 409
Query: 382 AAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMV 441
A+++ +++S C + +IN+ + +A+++ E+ G V+ Y+S++
Sbjct: 410 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSII 469
Query: 442 AMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVT 501
Y K+G++ A+ ++ M+ GC+PN W YNSLM + K L + L +M++ +
Sbjct: 470 DGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGII 529
Query: 502 PDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKL 561
P+ ++YTT++ +FD + + NG D ++ K + EE
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589
Query: 562 LQDMKSEGTKLDERLYHSAMNALRDAG 588
+ +G L + Y + ++ AG
Sbjct: 590 IV---RKGVALTKVYYTTLIDGFSKAG 613
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%)
Query: 385 KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 444
+VY QL+ G +P VTY ++I +YC+ + A + F + + G + +++V Y
Sbjct: 169 RVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGY 228
Query: 445 GKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDK 504
+TG +R A WL M GC+ N + Y L+ AK +R+ L+ M+R +P+
Sbjct: 229 CRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNV 288
Query: 505 VSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
++T +IS ++ ++ NG V M+ +SKL ++ + +K+ +
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 348
Query: 565 MKSEGTKLDERLYHSAMNALRD 586
M+ G D+ Y++ + L D
Sbjct: 349 MEKNGCHPDDWTYNTLIYGLCD 370
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/473 (19%), Positives = 190/473 (40%), Gaps = 39/473 (8%)
Query: 150 PDAHTCSRLVASCVRARKFKIANTLLQVFITDGEI-ALLAFNSAMGGYNKLHMYYSTILV 208
P+ + L++ ++ + A L +G + +++ +N+ + GY+KL + +
Sbjct: 286 PNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI 345
Query: 209 YEKMKSAGIVLDSGCYCQIM---------EAYYKIGDSEK-----VAALFLE-----CKS 249
E M+ G D Y ++ EA + ++ K F C +
Sbjct: 346 KELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA 405
Query: 250 RKLDST------------PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIY 297
K D ++ L +SL K R EA + ++ G++ + Y
Sbjct: 406 EKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITY 465
Query: 298 ASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMY--IEEGLVEKTLDVVESM 355
S+I + +V +A E+ K E G P LMY +++ + K + ++ M
Sbjct: 466 TSIIDGYCKSGKVDIALEVLKMMERDGC--QPNAWTYNSLMYGLVKDKKLHKAMALLTKM 523
Query: 356 KNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALY 415
+ + + ++ G + A +++E + G P + YA + +A C+
Sbjct: 524 QKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG-- 581
Query: 416 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSL 475
+AE+ + + +KG V Y++++ + K G A L+ +M +GC P+ + Y+ L
Sbjct: 582 -RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVL 640
Query: 476 MDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGG 535
+ + K L + + +M R + +YT +I R + D + YNE +G
Sbjct: 641 LHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH 700
Query: 536 VIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ + + K ++E+ L+ M+ EG D Y+ ++ G
Sbjct: 701 KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMG 753
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 133/329 (40%), Gaps = 38/329 (11%)
Query: 277 EALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRD-------- 328
+A++ R + P Y + S A + ++ + + G+L D
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190
Query: 329 -------------------------PE--VCLKLVLMYIEEGLVEKTLDVVESMKNAKLK 361
PE C LVL Y G + K + M +
Sbjct: 191 KSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 250
Query: 362 ISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKV 421
++ ++ G + + A+ ++ + GC P + +I+ C+ A +
Sbjct: 251 RNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 310
Query: 422 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGR 481
F M Q G V+ Y++M+ Y K GR+ DA+ + M+ GC P+ W YN+L ++G
Sbjct: 311 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL--IYGL 368
Query: 482 A-KNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRA 540
+ + E+L + TP V++T +I+ Y A +FD ++ N+ + +D
Sbjct: 369 CDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQ 428
Query: 541 IAGIMVGVFSKLSQIEELVKLLQDMKSEG 569
+ G ++ K +++E +LL ++ + G
Sbjct: 429 VFGKLINSLIKKDRLKEAKELLNEISANG 457
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 165/406 (40%), Gaps = 40/406 (9%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
P+A ++S ++G++KD + + A + +K P T L++ +D+
Sbjct: 495 PNAWTYNSLMYGLVKDKKLHK-AMALLTKMQK-DGIIPNVITYTTLLQGQCDEHDFDNAF 552
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIAL--LAFNSAMGG 195
L E + + PD H + L + +A + + A + FI +AL + + + + G
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYS----FIVRKGVALTKVYYTTLIDG 608
Query: 196 YNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDST 255
++K + E+M G DS Y ++ A K + + + R + T
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668
Query: 256 PFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEE 315
F+ Y IL D + + G+ A + + +M G + Y I S+ ++ AE+
Sbjct: 669 IFA---YTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 725
Query: 316 LFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFS 375
L + E +G+ D L+ G +++ ++ M A SC
Sbjct: 726 LILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGA--------SC------- 770
Query: 376 KRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAE-----KVFIEMQQKGF 430
YW + + L+ G + Y ++ +++ E ++ M + G
Sbjct: 771 -EPNYWTYCLLLKHLLK-----GNLAYVRSVDTS---GMWNLIELDITWQLLERMVKHGL 821
Query: 431 DKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLM 476
+ V YSS++A + K GR+ +A L+ M KG PN IY L+
Sbjct: 822 NPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 867
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 87/437 (19%), Positives = 160/437 (36%), Gaps = 78/437 (17%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD +++ ++G L D +T+E A + N A K F P T LI ++K+D +
Sbjct: 356 PDDWTYNTLIYG-LCDQKTEE-AEELLNNAVK-EGFTPTVVTFTNLINGYCMAEKFDDAL 412
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
+ D +L+ S ++ + K A LL
Sbjct: 413 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLN--------------------- 451
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
++ + G+V + Y I++ Y K G KV K + D
Sbjct: 452 -------------EISANGLVPNVITYTSIIDGYCKSG---KVDIALEVLKMMERDGCQP 495
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ Y L L K + +A+ M++ GI+ + Y +L+ + A LF
Sbjct: 496 NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 555
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+ E+ G+ D L + G E+ + A K+ +++GFSK
Sbjct: 556 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKV---YYTTLIDGFSKA 612
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
A + E++I +GC P TY+ +++A C
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALC--------------------------- 645
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
K R+ +A+ ++ +M +G + ++ Y L+D R ++++ EM
Sbjct: 646 --------KQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 697
Query: 498 RKVTPDKVSYTTVISAY 514
P +YT I++Y
Sbjct: 698 SGHKPSATTYTVFINSY 714
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 186/468 (39%), Gaps = 49/468 (10%)
Query: 113 FRPEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIAN 172
+ P T LI+ L + L + PD T L+ IA
Sbjct: 135 YSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIAL 194
Query: 173 TLLQVFITD-------GEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYC 225
L Q + D + ++ +N + G K+ ++E+MK+ G++ Y
Sbjct: 195 KLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYN 254
Query: 226 QIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDM 285
++ + G E+ L E + L + + +L D+L K G+ EA K M
Sbjct: 255 SLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVT---FNVLIDTLCKEGKVIEAKKLLGVM 311
Query: 286 KEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVL-------- 337
E GI+ D Y SLI F + ++ A ELF KG +P+V VL
Sbjct: 312 IESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC--EPDVISYNVLINGYSKTL 369
Query: 338 -------MYIEEGLVEKTLDVV----------------------ESMKNAKLKISDCISC 368
+Y E LV K +V+ MK + +
Sbjct: 370 KVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYG 429
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
++G K + A+K++ +L S +I+ C+ A ++F ++ +
Sbjct: 430 IFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNE 489
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQV 488
G + VV Y+ M+ + + G++ A L+ KM+A GC P++ YN+LM + L +V
Sbjct: 490 GHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEV 549
Query: 489 EKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
+L M ++ V+PD ++ + V+ ++ ++ C+ F + GV
Sbjct: 550 VQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV 597
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 184/422 (43%), Gaps = 20/422 (4%)
Query: 185 ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALF 244
+L +FN + G K+ Y +Y +M+ +G+ D ++ + + A F
Sbjct: 68 SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAF 127
Query: 245 LECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
R + Y L L R EA + F M++ G D Y +LI
Sbjct: 128 AGILRRGYSPNIVT---YNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGL 184
Query: 305 ASITEVKLAEELFKEAEEKGMLRDP---EV-CLKLVLMY--IEEGLV-----EKTLDVVE 353
+ +A +L +E ML D E+ C V+ Y I +GL ++ + E
Sbjct: 185 CGTGNINIALKLHQE-----MLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239
Query: 354 SMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIA 413
MK + S ++++GF + + ++ ++++ QG P VT+ +I+ C+
Sbjct: 240 EMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEG 299
Query: 414 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYN 473
+A+K+ M + G +V Y+S++ + G + A L M +KGCEP+V YN
Sbjct: 300 KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN 359
Query: 474 SLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMN 533
L++ + + + + KL+ EM P+ ++Y +++ A + D K ++ + +
Sbjct: 360 VLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 419
Query: 534 GGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQA 593
G + GI + K + E +KL ++KS KL+ + ++ L AG +++
Sbjct: 420 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAG-KLET 478
Query: 594 QW 595
W
Sbjct: 479 AW 480
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 112/537 (20%), Positives = 227/537 (42%), Gaps = 17/537 (3%)
Query: 73 HQTAVPDAKKFDSFL--HGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQS 130
H +A+P +F H + + ++ + P P S+ L+ L +
Sbjct: 25 HSSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTP--TPSLSSFNHLLSGLAKI 82
Query: 131 KKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAF 189
K + + SL ++ + D T + L+ + + + G ++ +
Sbjct: 83 KHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTY 142
Query: 190 NSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD---SEKVAALFLE 246
N+ + G H ++ +M+ G D Y +++ G+ + K+ L
Sbjct: 143 NTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLN 202
Query: 247 CKSR-KLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFA 305
SR +++ P + Y I+ D L K GR EA + F +MK +G++ Y SLI F
Sbjct: 203 DISRYEINCKP-NVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFC 261
Query: 306 SITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDC 365
+ + ++ L E ++G+ D L+ +EG V + ++ M + + + D
Sbjct: 262 CAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI-VPDL 320
Query: 366 IS-CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIE 424
++ +++ GF +A +++ + S+GC P ++Y +IN Y + +A K++ E
Sbjct: 321 VTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNE 380
Query: 425 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKN 484
M G V+ Y S++ G++ DA L + MKA G N + Y +D G KN
Sbjct: 381 MLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLD--GLCKN 438
Query: 485 --LRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIA 542
L + KL+ E++ + + +I +A + + + + + G +
Sbjct: 439 DCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTY 498
Query: 543 GIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAG-LQMQAQWLQQ 598
IM+ F + Q+++ L+Q M++ G D Y++ M ++ L+ Q L +
Sbjct: 499 TIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHR 555
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 163/388 (42%), Gaps = 59/388 (15%)
Query: 105 NEAKKLPEFRPEKSTLKLLIRY--LVQ----SKKWDSIVSLSEDFKIYNVLPDAHTCSRL 158
+EAK+L E + + +I Y L+ + KW+ L ++ + PD T + L
Sbjct: 232 DEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVL 291
Query: 159 VASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIV 218
+ + + K A LL V I +GIV
Sbjct: 292 IDTLCKEGKVIEAKKLLGVMI----------------------------------ESGIV 317
Query: 219 LDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEA 278
D Y ++E + +GD LF+ S+ + S Y +L + K+ + EA
Sbjct: 318 PDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVIS---YNVLINGYSKTLKVEEA 374
Query: 279 LKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLM 338
+K + +M G + Y SL+ +V A++LF + G+ +
Sbjct: 375 MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN-----SYTYG 429
Query: 339 YIEEGLVEKTLDVVESMK--------NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQL 390
+GL + + E+MK N KL+I + ++C +++G K A +++E+L
Sbjct: 430 IFLDGLCKNDC-LFEAMKLFTELKSSNFKLEIEN-LNC-LIDGLCKAGKLETAWELFEKL 486
Query: 391 ISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 450
++G P VTY +I+ +CR KA + +M+ G ++ Y++++ + ++ ++
Sbjct: 487 SNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKL 546
Query: 451 RDAMWLVAKMKAKGCEPNVWIYNSLMDM 478
+ + L+ +M K P+ + ++DM
Sbjct: 547 EEVVQLLHRMAQKDVSPDAITCSIVVDM 574
>gi|242078641|ref|XP_002444089.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
gi|241940439|gb|EES13584.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
Length = 942
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/544 (20%), Positives = 224/544 (41%), Gaps = 77/544 (14%)
Query: 78 PDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKLPEFRPEKSTLKLLIRYLVQSKKWDSIV 137
PD + S + G + E A YY + K FRP S +I L + ++
Sbjct: 413 PDETTYRSMVEGFGR-ANIYEEAILYYRKLKG-AGFRPNASNFYTMINLLARRDDNETAA 470
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
+ ED + CS +V VRA G
Sbjct: 471 EIMEDMRAAGC-----QCSSIVTVLVRA---------------------------YGAVG 498
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
++H + + + + I+ D+ C I+ + + S AL++ + +K + F
Sbjct: 499 RMH---KVLPILQACFNKKILFDA-TSCSILVTSF-VQKSLLEEALYI-LREKKWKDSAF 552
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
++Y +L S + G +A++ + M + +P I ++I F+ + AE ++
Sbjct: 553 EDNLYHMLICSCKEGGSYNDAVRIYNQMPKSETHPNPRISCTMIDVFSMMKRFADAEAIY 612
Query: 318 KE------------------------------------AEEKGMLRDPEVCLKLVLMYIE 341
E ++K ++ D + L ++ Y +
Sbjct: 613 LELKASASVLDMIAYSVIVRMYIKAQRLEDACSILAEMEKQKEIIPDKYLFLDMLRTYQK 672
Query: 342 EGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVT 401
GL+EK D ++ ++++ + + I+N + ++++++I QG + VT
Sbjct: 673 CGLLEKLADTYYWIRKSQVECDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLANTVT 732
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
+++ Y + L+++AEKVFI +++G +++Y++++A Y K+G + V M+
Sbjct: 733 LNVLLDIYGKAGLFNRAEKVFIMARKQGLAD-IISYNTIIAAYAKSGNFHSMNYFVQMMQ 791
Query: 462 AKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFD 521
G + YN ++D +G+A L + + ++M+R K D +Y +I+ Y R +
Sbjct: 792 DAGFPVSPEAYNCMLDAYGKAGQLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWIE 851
Query: 522 MCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAM 581
E + G V D ++ + E+ VKL+Q+M+ +G D Y + +
Sbjct: 852 DVSNVLAELKDRGVVPDLYSYNTLIKAYGIARMPEDAVKLMQEMRIKGISPDRVTYANLI 911
Query: 582 NALR 585
AL+
Sbjct: 912 AALQ 915
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 108/536 (20%), Positives = 218/536 (40%), Gaps = 79/536 (14%)
Query: 118 STLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQV 177
+ + L R + +K D+I ++ D + N+ + RL C + K + A +LQ
Sbjct: 315 AMITLYTRLGLFAKSEDTINLMNNDGLVPNM---ENWLVRLNVYCQQG-KMEEAELVLQS 370
Query: 178 FITDG-EIALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGD 236
+ +G + ++A+N+ + GY K V++ + SAG+ D Y ++E + +
Sbjct: 371 MVDEGFTLNIVAYNTLITGYGKSSDVQKANRVFDSLGSAGLAPDETTYRSMVEGFGRANI 430
Query: 237 SEKVAALFLECKSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSI 296
E+ + + K P +++ Y ++ + L + A + DM+ G + SI
Sbjct: 431 YEEAILYYRKLKGAGF--RPNASNFYTMI-NLLARRDDNETAAEIMEDMRAAGC-QCSSI 486
Query: 297 YASLICSFASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMK 356
L+ ++ ++ + + + K +L D C LV ++++ L+E+ L ++ K
Sbjct: 487 VTVLVRAYGAVGRMHKVLPILQACFNKKILFDATSCSILVTSFVQKSLLEEALYILREKK 546
Query: 357 NAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYS 416
D + ++ + Y AV++Y Q+ P ++I+ + + ++
Sbjct: 547 WKDSAFEDNLYHMLICSCKEGGSYNDAVRIYNQMPKSETHPNPRISCTMIDVFSMMKRFA 606
Query: 417 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM-KAKGCEPN------- 468
AE +++E++ ++AYS +V MY K R+ DA ++A+M K K P+
Sbjct: 607 DAEAIYLELKASASVLDMIAYSVIVRMYIKAQRLEDACSILAEMEKQKEIIPDKYLFLDM 666
Query: 469 -----------------VWI-----------YNSLMDMHGRAKNLRQVEKLWKE------ 494
WI YN +++ GRA + ++ +++ E
Sbjct: 667 LRTYQKCGLLEKLADTYYWIRKSQVECDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGH 726
Query: 495 ----------------------------MERRKVTPDKVSYTTVISAYNRAREFDMCVKF 526
M R++ D +SY T+I+AY ++ F F
Sbjct: 727 LANTVTLNVLLDIYGKAGLFNRAEKVFIMARKQGLADIISYNTIIAAYAKSGNFHSMNYF 786
Query: 527 YNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMN 582
+ G + M+ + K Q+EE +LQ MK K D Y+ +N
Sbjct: 787 VQMMQDAGFPVSPEAYNCMLDAYGKAGQLEEFASVLQKMKRAKCKFDHYTYNIMIN 842
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 173/402 (43%), Gaps = 37/402 (9%)
Query: 138 SLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIALLAFNSAMGGYN 197
S ++ +IYN +P + T SC T++ VF +
Sbjct: 569 SYNDAVRIYNQMPKSETHPNPRISC----------TMIDVF------------------S 600
Query: 198 KLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPF 257
+ + +Y ++K++ VLD Y I+ Y K E ++ E + +K + P
Sbjct: 601 MMKRFADAEAIYLELKASASVLDMIAYSVIVRMYIKAQRLEDACSILAEMEKQK-EIIP- 658
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+++ + + K G + + +++ + D ++Y +I V +F
Sbjct: 659 DKYLFLDMLRTYQKCGLLEKLADTYYWIRKSQVECDEAMYNCIINCCGRAIPVDELSRIF 718
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
E ++G L + L+ +Y + GL + V + K ++D IS + +
Sbjct: 719 DEMIQQGHLANTVTLNVLLDIYGKAGLFNRAEKVF--IMARKQGLADIISYNTIIAAYAK 776
Query: 378 RGYWAAVKVYEQLISQGCIP-GQVTYASIINAYCRIALYSKAEKVFIEMQQKG--FDKCV 434
G + ++ + Q++ P Y +++AY + + V +M++ FD
Sbjct: 777 SGNFHSMNYFVQMMQDAGFPVSPEAYNCMLDAYGKAGQLEEFASVLQKMKRAKCKFDH-- 834
Query: 435 VAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKE 494
Y+ M+ +YG+ G I D ++A++K +G P+++ YN+L+ +G A+ KL +E
Sbjct: 835 YTYNIMINIYGRRGWIEDVSNVLAELKDRGVVPDLYSYNTLIKAYGIARMPEDAVKLMQE 894
Query: 495 MERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGV 536
M + ++PD+V+Y +I+A R F VK+ R G V
Sbjct: 895 MRIKGISPDRVTYANLIAALQRNENFLEAVKWSLWMRQTGVV 936
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/171 (18%), Positives = 89/171 (52%)
Query: 401 TYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKM 460
Y+++I Y R+ L++K+E M G + + + +Y + G++ +A ++ M
Sbjct: 312 AYSAMITLYTRLGLFAKSEDTINLMNNDGLVPNMENWLVRLNVYCQQGKMEEAELVLQSM 371
Query: 461 KAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREF 520
+G N+ YN+L+ +G++ ++++ +++ + + PD+ +Y +++ + RA +
Sbjct: 372 VDEGFTLNIVAYNTLITGYGKSSDVQKANRVFDSLGSAGLAPDETTYRSMVEGFGRANIY 431
Query: 521 DMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTK 571
+ + +Y + + G + + M+ + ++ E ++++DM++ G +
Sbjct: 432 EEAILYYRKLKGAGFRPNASNFYTMINLLARRDDNETAAEIMEDMRAAGCQ 482
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 108/230 (46%), Gaps = 4/230 (1%)
Query: 335 LVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ- 393
L+++Y + G + + + M+N +K + S I R G +A + L++
Sbjct: 282 LMVLYQKTGKLSEAEFTFQKMRNCNIKCVNAYSAMIT--LYTRLGLFAKSEDTINLMNND 339
Query: 394 GCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 453
G +P + +N YC+ +AE V M +GF +VAY++++ YGK+ ++ A
Sbjct: 340 GLVPNMENWLVRLNVYCQQGKMEEAELVLQSMVDEGFTLNIVAYNTLITGYGKSSDVQKA 399
Query: 454 MWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISA 513
+ + + G P+ Y S+++ GRA + +++++ P+ ++ T+I+
Sbjct: 400 NRVFDSLGSAGLAPDETTYRSMVEGFGRANIYEEAILYYRKLKGAGFRPNASNFYTMINL 459
Query: 514 YNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQ 563
R + + + + R G +I ++V + + ++ +++ +LQ
Sbjct: 460 LARRDDNETAAEIMEDMRA-AGCQCSSIVTVLVRAYGAVGRMHKVLPILQ 508
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/458 (20%), Positives = 200/458 (43%), Gaps = 13/458 (2%)
Query: 133 WDSIVSLSEDFKIYNVLPDAHTCSRLVASC-VRARKFKIANTLLQVFIT--DGEIA--LL 187
W+ ++ L + + + PD T + L+++C +R + + VF T DG I L
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG----LGDEAEMVFRTMNDGGIVPDLT 283
Query: 188 AFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLEC 247
++ + + KL + +M S G + D Y ++EAY K G ++ +F +
Sbjct: 284 TYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 248 KSRKLDSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASI 307
++ TP + + Y +L + G+SGR + + F +MK D + Y LI F
Sbjct: 344 QA--AGCTP-NANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEG 400
Query: 308 TEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCIS 367
K LF + E+ + D E ++ + GL E +++ M + S
Sbjct: 401 GYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAY 460
Query: 368 CAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQ 427
++ F + Y A+ + + G P TY S++ ++ R L ++E + +
Sbjct: 461 TGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVD 520
Query: 428 KGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQ 487
G + +++ + Y + G+ +A+ M+ C+P+ +++ ++ A+ + +
Sbjct: 521 SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDE 580
Query: 488 VEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNG-GVIDRAIAGIMV 546
+ ++EM+ + P + Y +++ Y + +D + E N I + I ++
Sbjct: 581 CREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIK 640
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
G + S + + +L + SEG L R Y++ ++AL
Sbjct: 641 GDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDAL 678
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 138/285 (48%), Gaps = 1/285 (0%)
Query: 315 ELFKEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGF 374
E+F E +G+ R L+ Y G E +L++++ MKN K+ S ++N
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINAC 221
Query: 375 SKRRGYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKC 433
++ W + ++ ++ +G P VTY ++++A L +AE VF M G
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281
Query: 434 VVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWK 493
+ YS +V +GK R+ L+++M + G P++ YN L++ + ++ ++++ ++
Sbjct: 282 LTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 494 EMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLS 553
+M+ TP+ +Y+ +++ + ++ +D + + E + + D A I++ VF +
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGG 401
Query: 554 QIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGLQMQAQWLQQ 598
+E+V L DM E + D Y + A GL A+ + Q
Sbjct: 402 YFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 446
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 125/252 (49%), Gaps = 16/252 (6%)
Query: 343 GLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQ-GCIPGQVT 401
G + + LD+ ++ KL ++D + F+ R + ++++++ + Q C P +
Sbjct: 90 GSIARCLDIFKN----KLSLNDF--ALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHI 143
Query: 402 YASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMK 461
Y +I+ R L K +VF EM +G + V +Y++++ YG+ GR ++ L+ +MK
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 462 AKGCEPNVWIYNSLMDMHGRAK-NLRQVEKLWKEMERRKVTPDKVSYTTVISA---YNRA 517
P++ YN++++ R + + L+ EM + PD V+Y T++SA
Sbjct: 204 NDKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLG 263
Query: 518 REFDMCVKFYNEFRMNGGVI-DRAIAGIMVGVFSKLSQIEELVKLLQDMKSEGTKLDERL 576
E +M + N+ GG++ D +V F KL ++E++ LL +M S G+ D
Sbjct: 264 DEAEMVFRTMND----GGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITS 319
Query: 577 YHSAMNALRDAG 588
Y+ + A +G
Sbjct: 320 YNVLLEAYAKSG 331
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 164/428 (38%), Gaps = 75/428 (17%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDGEIA-LLAFNSAMGGYNKLHMYYSTI 206
++PD T S LV + + R+ + + LL + G + + ++N + Y K +
Sbjct: 278 IVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAM 337
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
V+ +M++AG ++ Y ++ + + G + V LFLE KS D Y IL
Sbjct: 338 GVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDP---DAATYNILI 394
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLI--C---------------------- 302
+ G+ G E + F DM E+ I D Y +I C
Sbjct: 395 EVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIV 454
Query: 303 ----SFASITEVKLAEELFKEA-------EEKGMLRDPEVCLKLVLMYIEEGLVEKTLDV 351
++ + E L++EA E G E L+ + GLV+++ +
Sbjct: 455 PSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAI 514
Query: 352 VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 411
+ + ++ + + A + + + + AVK Y + C P + T ++++ Y
Sbjct: 515 LSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSF 574
Query: 412 IALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD------------------- 452
L + + F EM+ ++ Y M+A+YGKT R D
Sbjct: 575 ARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQV 634
Query: 453 ------------AMWLVA-----KMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEM 495
+ W + K+ ++GC + YN+L+D + ++ E
Sbjct: 635 IGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEA 694
Query: 496 ERRKVTPD 503
+R + P+
Sbjct: 695 TKRGLFPE 702
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 142/326 (43%), Gaps = 21/326 (6%)
Query: 115 PEKSTLKLLIRYLVQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTL 174
P+ +T +LI + + +V+L D N+ PD T ++ +C + + A +
Sbjct: 385 PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKI 444
Query: 175 LQVFITDGEI--ALLAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYY 232
LQ ++T +I + A+ + + + +Y ++ + M G Y ++ ++
Sbjct: 445 LQ-YMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFA 503
Query: 233 KIGDSEKVAALFLECKSRKLDS-TPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGIL 291
+ G ++ A+ SR +DS P + + ++ + G+ EA+K + DM++
Sbjct: 504 RGGLVKESEAIL----SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCD 559
Query: 292 EDPSIYASLICSFASITEVKLAEELFKEAEEKGMLRDPEV---CLKLVLMYIEEGLVEKT 348
D +++ ++ V E F+E + +L P + C+ L + G E+
Sbjct: 560 PDERTLEAVLSVYSFARLVDECREQFEEMKASDIL--PSIMCYCMMLAVY----GKTERW 613
Query: 349 LDV---VESMKNAKLKISDCISCAIVNGFSKRRGYWAAVK-VYEQLISQGCIPGQVTYAS 404
DV +E M + ++ + ++ G W V+ V ++L S+GC G Y +
Sbjct: 614 DDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNA 673
Query: 405 IINAYCRIALYSKAEKVFIEMQQKGF 430
+++A + +A +V E ++G
Sbjct: 674 LLDALWWLGQKERAARVLNEATKRGL 699
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/451 (19%), Positives = 204/451 (45%), Gaps = 5/451 (1%)
Query: 148 VLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIALLAFNSAMGGYNKLHMYYSTI 206
++P+ T S L+ + ++ A +L+ + G + +N + GY+ M+ ++
Sbjct: 184 IMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESV 243
Query: 207 LVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLECKSRKLDSTPFSTHMYKILC 266
V+++M S+ +V D G M A K G ++ +F S L Y L
Sbjct: 244 RVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIF---DSMVLKGPKPDVISYGALL 300
Query: 267 DSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELFKEAEEKGML 326
+G F M +G++ D ++ +LI ++A + + + +F++ ++G+
Sbjct: 301 HGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVN 360
Query: 327 RDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKRRGYWAAVKV 386
D ++ + G ++ ++ M + + + ++ G RR A ++
Sbjct: 361 PDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKEL 420
Query: 387 YEQLISQGCIPGQVTY-ASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 445
++S+G P + + SIIN C+ ++ + V + G ++ ++S+V Y
Sbjct: 421 ISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYC 480
Query: 446 KTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKV 505
G +++A+ L+ M++ G EP+++ YN+L+D + + + L+++M ++VT V
Sbjct: 481 LVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSV 540
Query: 506 SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQDM 565
SY ++ +AR + + ++E +G + ++G + + +E LL+ +
Sbjct: 541 SYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 600
Query: 566 KSEGTKLDERLYHSAMNALRDAGLQMQAQWL 596
S K D ++ + A+ G + +A+ L
Sbjct: 601 FSMNVKFDILTFNIVIRAMFKVGRRQEAKEL 631
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 148/312 (47%)
Query: 258 STHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSFASITEVKLAEELF 317
+ + Y IL + ++ R L F + G+ D Y +LI F+ EV A +LF
Sbjct: 117 TIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLF 176
Query: 318 KEAEEKGMLRDPEVCLKLVLMYIEEGLVEKTLDVVESMKNAKLKISDCISCAIVNGFSKR 377
+ EE+G++ + L+ + ++K V+ M A ++ ++ +++G+S
Sbjct: 177 YKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTS 236
Query: 378 RGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAY 437
+ +V+V++++ S +P S + A C+ +A +F M KG V++Y
Sbjct: 237 GMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISY 296
Query: 438 SSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMER 497
+++ Y G I L M +G P+ ++N+L++ + R + + ++++M +
Sbjct: 297 GALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTK 356
Query: 498 RKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEE 557
+ V PD ++++TVISA+ R D ++ +N G D A+ ++ + +
Sbjct: 357 QGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVK 416
Query: 558 LVKLLQDMKSEG 569
+L+ DM S+G
Sbjct: 417 AKELISDMLSKG 428
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 104/219 (47%), Gaps = 6/219 (2%)
Query: 369 AIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQK 428
A+++GFSK A ++ ++ QG +P VTY+S+IN C+ KAE+V +M
Sbjct: 158 ALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGA 217
Query: 429 GFDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDM---HGRAKNL 485
G + Y+ ++ Y +G ++++ + +M + P+V NS M HGR K
Sbjct: 218 GVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEA 277
Query: 486 RQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIM 545
R + + M + PD +SY ++ Y A +N G V DR + +
Sbjct: 278 RDI---FDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTL 334
Query: 546 VGVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNAL 584
+ +++L +++ + + +DM +G D + + ++A
Sbjct: 335 INAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAF 373
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/575 (18%), Positives = 225/575 (39%), Gaps = 101/575 (17%)
Query: 74 QTAVPDAKKFDSFLHGMLKDPQTQELAYDYYNEAKKL------PEFRPEKSTLKLLIRYL 127
Q +P+ + S ++G+ K T+E+ ++A+++ RP T LI
Sbjct: 182 QGIMPNVVTYSSLINGLCK---TKEM-----DKAERVLRQMVGAGVRPNNMTYNCLIHGY 233
Query: 128 VQSKKWDSIVSLSEDFKIYNVLPDAHTCSRLVASCVRARKFKIANTLLQVFITDG-EIAL 186
S W V + ++ ++PD C+ + + + + K A + + G + +
Sbjct: 234 STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDV 293
Query: 187 LAFNSAMGGYNKLHMYYSTILVYEKMKSAGIVLDSGCYCQIMEAYYKIGDSEKVAALFLE 246
+++ + + GY ++ M G+V D + ++ AY ++G +K +F +
Sbjct: 294 ISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFED 353
Query: 247 CKSRKL--DSTPFSTHMYKILCDSLGKSGRAFEALKFFRDMKEKGILEDPSIYASLICSF 304
+ + D FST + + + GR +A++ F M + G+ D ++Y+ LI
Sbjct: 354 MTKQGVNPDIITFST-----VISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQ 408
Query: 305 ASITEVKLAEELFKEAEEKGMLRDPEVCLKLVLMYI----EEGLVEKTLDVVESMKNAKL 360
+ ++ A+EL + KG+ P C+K I +EG V + DVV+ + +
Sbjct: 409 CNRRDLVKAKELISDMLSKGI---PPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQ 465
Query: 361 KISDCISCAIVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYC---------- 410
+ + ++V+G+ AV + + + S G P TY ++++ YC
Sbjct: 466 RPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALT 525
Query: 411 --------RIALYSK-----------------AEKVFIEMQQKGFDKCVVAYSSMV---- 441
R+ L S A+++F EM + G + Y++++
Sbjct: 526 LFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLC 585
Query: 442 --------------------------------AMYGKTGRIRDAMWLVAKMKAKGCEPNV 469
AM+ K GR ++A L A + G P +
Sbjct: 586 RNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMF-KVGRRQEAKELFAAISTYGLVPTI 644
Query: 470 WIYNSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRAREFDMCVKFYNE 529
Y ++ + ++ + L+ ME+ TPD +I E + ++
Sbjct: 645 LTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSK 704
Query: 530 FRMNGGVIDRAIAGIMVGVFSKLSQIEELVKLLQD 564
G + + +++ +FS + E +KLL +
Sbjct: 705 IDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 739
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 101/223 (45%), Gaps = 6/223 (2%)
Query: 370 IVNGFSKRRGYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIALYSKAEKVFIEMQQKG 429
++N + + R + V+ +L+ G P +Y ++I+ + + KA +F +M+++G
Sbjct: 124 LINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQG 183
Query: 430 FDKCVVAYSSMVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVE 489
VV YSS++ KT + A ++ +M G PN YN L+ + + ++
Sbjct: 184 IMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESV 243
Query: 490 KLWKEMERRKVTPDKV---SYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMV 546
+++KEM + PD S+ T + + R +E ++ + G D G ++
Sbjct: 244 RVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKE---ARDIFDSMVLKGPKPDVISYGALL 300
Query: 547 GVFSKLSQIEELVKLLQDMKSEGTKLDERLYHSAMNALRDAGL 589
++ I + L M EG D ++++ +NA G+
Sbjct: 301 HGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGM 343
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 3/209 (1%)
Query: 383 AVKVYEQLISQGC---IPGQVTYASIINAYCRIALYSKAEKVFIEMQQKGFDKCVVAYSS 439
AV++++++ C P TY +IN Y R VF + + G V +Y++
Sbjct: 99 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 158
Query: 440 MVAMYGKTGRIRDAMWLVAKMKAKGCEPNVWIYNSLMDMHGRAKNLRQVEKLWKEMERRK 499
++ + K G + A L KM+ +G PNV Y+SL++ + K + + E++ ++M
Sbjct: 159 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 218
Query: 500 VTPDKVSYTTVISAYNRAREFDMCVKFYNEFRMNGGVIDRAIAGIMVGVFSKLSQIEELV 559
V P+ ++Y +I Y+ + + V+ + E + V D + K +I+E
Sbjct: 219 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 278
Query: 560 KLLQDMKSEGTKLDERLYHSAMNALRDAG 588
+ M +G K D Y + ++ AG
Sbjct: 279 DIFDSMVLKGPKPDVISYGALLHGYATAG 307
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,730,153,972
Number of Sequences: 23463169
Number of extensions: 340755602
Number of successful extensions: 987822
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6299
Number of HSP's successfully gapped in prelim test: 4712
Number of HSP's that attempted gapping in prelim test: 849701
Number of HSP's gapped (non-prelim): 60683
length of query: 603
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 454
effective length of database: 8,863,183,186
effective search space: 4023885166444
effective search space used: 4023885166444
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)