Citrus Sinensis ID: 007462

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600---
MGDVVLNDEELKEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQVERKFILRHSNASAFTRYTNKPSEPQHSSLSGVCNQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVNSLATGHSKQSELAVSYPQQRPCPVPVSVKVNSTNQAMHKLDHKLDSLEDLGHISPATDQSASSSFCNGAVSRLNSMGYGSACGSNSNLDQVTAGRAAAESKNEEGLFPSNGNLRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSETLPLESENHSGNISDG
cccccccHHHHHHccccccccHHcccccccccEEEEEEccHHHHHHHHHHHHHccccEEEEccHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHHcccccccccEEEEEccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHccccccccccccccHHHHHcccccccccccccccccccccccccccccccHHHHHHHcccccccccccccHHHHHccccccccccccccccccHHHHccccccccccccHHHccccccccccccccccccccccHHcHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEHHHHHHHHHHccccccEEEEEcccccccccccccccccccc
*****************EGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR**************************************************************************DLSRQLWGKSLQNDVKMQNHE********************************************************************************************************************************************************************************************************************************************************************************************************************CY**********************F***********************
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MGDVVLNDEELKEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQVERKFILRHSNASAFTRYTNKPSEPQHSSLSGVCNQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVNSLATGHSKQSELAVSYPQQRPCPVPVSVKxxxxxxxxxxxxxxxxxxxxxGHISPATDQSASSSFCNGAVSRLNSMGYGSACGSNSNLDQVTAGRAAAESKNEEGLFPSNGNLRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSETLPLESENHSGNISDG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Two-component response regulator-like APRR5 Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The particular coordinated sequential expression of APRR9, APRR7, APRR5, APRR3 and APPR1 result to circadian waves that may be at the basis of the endogenous circadian clock.probableQ6LA42

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1W25, chain A
Confidence level:very confident
Coverage over the Query: 32-154
View the alignment between query and template
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Template: 3SY8, chain A
Confidence level:confident
Coverage over the Query: 31-184
View the alignment between query and template
View the model in PyMOL
Template: 3OGL, chain Q
Confidence level:probable
Coverage over the Query: 538-548
View the alignment between query and template
View the model in PyMOL
Template: 2BDQ, chain A
Confidence level:probable
Coverage over the Query: 2-23,35-136
View the alignment between query and template
View the model in PyMOL