Query 007464
Match_columns 603
No_of_seqs 217 out of 975
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 23:57:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007464.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007464hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02620 indole-3-acetic acid- 100.0 3E-135 6E-140 1120.6 55.2 573 8-586 19-607 (612)
2 PLN02247 indole-3-acetic acid- 100.0 3E-133 6E-138 1107.2 54.8 578 1-585 1-603 (606)
3 PLN02249 indole-3-acetic acid- 100.0 6E-125 1E-129 1049.7 55.6 568 7-585 17-595 (597)
4 PF03321 GH3: GH3 auxin-respon 100.0 2E-113 4E-118 956.2 41.4 513 13-562 2-527 (528)
5 COG1541 PaaK Coenzyme F390 syn 100.0 4.4E-27 9.5E-32 251.3 25.9 397 16-555 14-433 (438)
6 TIGR03335 F390_ftsA coenzyme F 99.9 3.1E-26 6.7E-31 251.8 26.6 391 23-534 13-432 (445)
7 TIGR02155 PA_CoA_ligase phenyl 99.9 5.4E-24 1.2E-28 232.0 26.5 380 22-533 6-410 (422)
8 TIGR02304 aden_form_hyp probab 99.9 2.9E-21 6.4E-26 210.3 26.5 315 23-484 23-377 (430)
9 COG1021 EntE Peptide arylation 99.5 2.6E-14 5.7E-19 148.8 10.4 130 294-451 306-459 (542)
10 PRK07529 AMP-binding domain pr 99.5 1.7E-12 3.7E-17 148.9 25.1 136 292-450 332-489 (632)
11 PRK06334 long chain fatty acid 99.5 1.2E-12 2.7E-17 147.2 22.9 134 292-451 298-455 (539)
12 PRK00174 acetyl-CoA synthetase 99.5 1.5E-11 3.3E-16 141.1 30.1 230 292-570 366-634 (637)
13 TIGR02188 Ac_CoA_lig_AcsA acet 99.5 2E-11 4.3E-16 139.8 30.7 228 292-567 357-624 (625)
14 PRK09274 peptide synthase; Pro 99.5 7.1E-12 1.5E-16 140.9 26.5 142 292-451 287-465 (552)
15 PRK07788 acyl-CoA synthetase; 99.4 1.4E-11 3.1E-16 138.4 24.9 132 292-451 322-472 (549)
16 PTZ00237 acetyl-CoA synthetase 99.4 2.2E-11 4.7E-16 140.4 26.2 132 292-451 379-537 (647)
17 PRK13295 cyclohexanecarboxylat 99.4 2.3E-11 5E-16 136.8 25.6 158 292-485 311-491 (547)
18 PRK04319 acetyl-CoA synthetase 99.4 3.1E-11 6.7E-16 136.5 26.7 132 292-451 322-477 (570)
19 PLN02574 4-coumarate--CoA liga 99.4 1.9E-11 4E-16 138.1 24.5 133 292-450 318-474 (560)
20 PRK05677 long-chain-fatty-acid 99.4 6.9E-11 1.5E-15 133.5 29.1 131 292-450 325-477 (562)
21 TIGR01734 D-ala-DACP-lig D-ala 99.4 6.9E-11 1.5E-15 130.8 28.0 133 291-451 256-418 (502)
22 PRK06155 crotonobetaine/carnit 99.4 7.5E-11 1.6E-15 132.7 27.6 131 293-451 294-445 (542)
23 PRK07514 malonyl-CoA synthase; 99.4 8.9E-11 1.9E-15 130.0 27.6 134 290-450 266-421 (504)
24 PRK05605 long-chain-fatty-acid 99.4 5.5E-11 1.2E-15 134.4 26.3 133 292-450 335-489 (573)
25 TIGR02316 propion_prpE propion 99.4 2.4E-10 5.3E-15 131.0 31.6 133 292-451 353-517 (628)
26 PRK06060 acyl-CoA synthetase; 99.4 6.8E-11 1.5E-15 137.4 27.3 133 292-451 259-410 (705)
27 COG0318 CaiC Acyl-CoA syntheta 99.4 2.6E-11 5.6E-16 136.6 23.0 131 294-451 292-446 (534)
28 PLN02654 acetate-CoA ligase 99.4 2.1E-10 4.6E-15 132.7 30.3 226 293-567 397-662 (666)
29 PRK09088 acyl-CoA synthetase; 99.4 5.4E-11 1.2E-15 131.4 24.2 132 292-450 251-405 (488)
30 TIGR03205 pimA dicarboxylate-- 99.4 8.5E-11 1.8E-15 131.9 25.8 134 292-451 311-466 (541)
31 PRK04813 D-alanine--poly(phosp 99.4 6E-11 1.3E-15 131.0 23.5 132 292-451 259-420 (503)
32 PRK06145 acyl-CoA synthetase; 99.4 1.3E-10 2.7E-15 128.7 25.9 133 292-451 263-418 (497)
33 PRK08314 long-chain-fatty-acid 99.4 2.4E-10 5.1E-15 128.2 28.4 133 292-451 304-461 (546)
34 PRK12583 acyl-CoA synthetase; 99.4 8.3E-11 1.8E-15 132.1 24.6 159 292-485 316-500 (558)
35 PRK08633 2-acyl-glycerophospho 99.4 8.9E-11 1.9E-15 143.0 26.2 133 292-451 897-1064(1146)
36 PRK08316 acyl-CoA synthetase; 99.4 2.1E-10 4.6E-15 127.4 26.9 132 293-451 286-440 (523)
37 PRK06164 acyl-CoA synthetase; 99.4 3E-10 6.4E-15 127.3 28.1 110 319-450 319-450 (540)
38 PRK03584 acetoacetyl-CoA synth 99.4 4.2E-10 9.2E-15 129.7 29.9 226 293-567 383-648 (655)
39 PRK07638 acyl-CoA synthetase; 99.4 1.7E-10 3.6E-15 127.7 25.4 127 300-450 258-405 (487)
40 PRK13382 acyl-CoA synthetase; 99.4 1.2E-10 2.6E-15 130.9 24.5 132 292-451 311-461 (537)
41 PRK10524 prpE propionyl-CoA sy 99.4 3.4E-10 7.5E-15 129.6 28.7 132 293-451 355-518 (629)
42 PRK06187 long-chain-fatty-acid 99.3 1.2E-10 2.6E-15 128.9 23.9 190 291-527 279-498 (521)
43 PLN02246 4-coumarate--CoA liga 99.3 2.4E-10 5.2E-15 128.2 26.4 132 293-450 298-456 (537)
44 PRK07656 long-chain-fatty-acid 99.3 2.1E-10 4.6E-15 127.0 25.6 131 292-450 280-436 (513)
45 PLN03051 acyl-activating enzym 99.3 1.8E-10 4E-15 128.3 25.2 131 293-450 236-401 (499)
46 PRK05852 acyl-CoA synthetase; 99.3 1E-10 2.3E-15 131.0 23.3 134 291-450 293-452 (534)
47 TIGR03208 cyc_hxne_CoA_lg cycl 99.3 1.4E-10 3E-15 130.1 23.2 131 292-450 309-461 (538)
48 PLN02860 o-succinylbenzoate-Co 99.3 5.6E-11 1.2E-15 134.3 19.7 149 291-451 286-459 (563)
49 PRK10946 entE enterobactin syn 99.3 2.2E-10 4.7E-15 128.7 24.1 132 292-450 299-453 (536)
50 PLN02614 long-chain acyl-CoA s 99.3 2.3E-11 5E-16 140.6 16.3 134 293-450 386-541 (666)
51 PLN02736 long-chain acyl-CoA s 99.3 4.6E-11 1E-15 137.6 18.4 135 293-451 376-533 (651)
52 PRK07786 long-chain-fatty-acid 99.3 5.3E-10 1.2E-14 125.6 26.5 130 294-450 291-443 (542)
53 TIGR01733 AA-adenyl-dom amino 99.3 1.2E-10 2.6E-15 125.0 20.1 132 292-450 233-399 (408)
54 PRK07059 Long-chain-fatty-acid 99.3 7.8E-10 1.7E-14 124.6 27.6 131 293-451 327-480 (557)
55 COG1022 FAA1 Long-chain acyl-C 99.3 2.2E-11 4.7E-16 137.5 14.7 133 294-470 354-506 (613)
56 PRK05851 long-chain-fatty-acid 99.3 6.6E-10 1.4E-14 124.5 26.8 63 384-451 366-440 (525)
57 PRK07867 acyl-CoA synthetase; 99.3 7.1E-10 1.5E-14 124.5 27.0 128 294-450 268-425 (529)
58 PRK07769 long-chain-fatty-acid 99.3 5.5E-10 1.2E-14 128.1 26.1 63 384-451 412-508 (631)
59 PRK12492 long-chain-fatty-acid 99.3 1.4E-09 2.9E-14 123.0 28.9 130 293-450 333-485 (562)
60 PRK07768 long-chain-fatty-acid 99.3 1.5E-09 3.3E-14 121.8 29.0 129 384-532 380-527 (545)
61 PRK08974 long-chain-fatty-acid 99.3 1.1E-09 2.3E-14 123.6 27.7 131 293-451 325-477 (560)
62 TIGR03098 ligase_PEP_1 acyl-Co 99.3 1E-09 2.3E-14 121.7 27.1 132 293-451 274-439 (515)
63 PRK07470 acyl-CoA synthetase; 99.3 4.5E-10 9.7E-15 125.5 24.2 132 291-450 278-438 (528)
64 COG0365 Acs Acyl-coenzyme A sy 99.3 4.1E-10 9E-15 125.5 23.5 131 291-451 288-441 (528)
65 TIGR02275 DHB_AMP_lig 2,3-dihy 99.3 7.8E-10 1.7E-14 123.7 26.0 132 293-451 299-453 (527)
66 PLN02387 long-chain-fatty-acid 99.3 5E-11 1.1E-15 138.6 16.7 134 293-450 420-580 (696)
67 TIGR01217 ac_ac_CoA_syn acetoa 99.3 8.8E-10 1.9E-14 127.2 26.6 222 293-567 384-646 (652)
68 PRK08315 AMP-binding domain pr 99.3 1.3E-09 2.9E-14 122.5 27.2 134 292-451 314-472 (559)
69 PRK13383 acyl-CoA synthetase; 99.3 1.2E-09 2.7E-14 121.9 26.4 131 292-450 291-440 (516)
70 PRK10252 entF enterobactin syn 99.3 4.7E-10 1E-14 138.6 25.2 131 293-451 717-882 (1296)
71 TIGR03443 alpha_am_amid L-amin 99.3 9.8E-11 2.1E-15 145.8 19.0 135 292-451 528-723 (1389)
72 KOG1176 Acyl-CoA synthetase [L 99.3 3.1E-10 6.7E-15 127.0 20.8 133 292-451 298-453 (537)
73 PRK06839 acyl-CoA synthetase; 99.3 1.5E-09 3.2E-14 119.9 26.2 130 292-450 263-415 (496)
74 PRK08751 putative long-chain f 99.3 4.3E-10 9.4E-15 126.7 21.9 132 292-451 328-482 (560)
75 PLN02861 long-chain-fatty-acid 99.3 7.9E-11 1.7E-15 136.0 16.1 133 294-450 384-538 (660)
76 PRK07787 acyl-CoA synthetase; 99.2 3.4E-09 7.4E-14 116.9 28.0 132 292-450 240-395 (471)
77 PRK08043 bifunctional acyl-[ac 99.2 1.1E-09 2.5E-14 127.6 25.3 127 293-451 479-636 (718)
78 PLN02330 4-coumarate--CoA liga 99.2 2.9E-09 6.2E-14 119.8 26.7 129 300-451 307-462 (546)
79 PRK12467 peptide synthase; Pro 99.2 1.4E-10 3.1E-15 156.1 18.8 133 292-451 3350-3516(3956)
80 PRK05857 acyl-CoA synthetase; 99.2 1.5E-09 3.3E-14 122.1 24.2 136 292-450 285-446 (540)
81 PRK12406 long-chain-fatty-acid 99.2 1.1E-08 2.3E-13 113.9 30.8 130 293-450 271-423 (509)
82 PRK03640 O-succinylbenzoic aci 99.2 4.2E-09 9E-14 116.0 27.2 128 293-450 254-404 (483)
83 PRK13388 acyl-CoA synthetase; 99.2 7.1E-10 1.5E-14 124.8 20.9 128 307-450 277-424 (540)
84 PRK06710 long-chain-fatty-acid 99.2 2.7E-09 5.8E-14 120.4 25.1 132 293-451 323-476 (563)
85 PRK06188 acyl-CoA synthetase; 99.2 2.2E-09 4.7E-14 119.9 24.0 131 292-450 280-437 (524)
86 PRK06087 short chain acyl-CoA 99.2 2.1E-09 4.5E-14 120.8 24.0 129 293-450 302-454 (547)
87 TIGR02262 benz_CoA_lig benzoat 99.2 5.3E-09 1.1E-13 116.3 26.9 131 293-451 278-429 (508)
88 KOG1177 Long chain fatty acid 99.2 1.1E-10 2.5E-15 124.4 12.6 63 384-450 426-505 (596)
89 PRK12316 peptide synthase; Pro 99.2 8E-10 1.7E-14 151.7 24.1 133 292-451 2260-2426(5163)
90 PRK08279 long-chain-acyl-CoA s 99.2 5.3E-09 1.2E-13 119.1 27.0 143 292-450 313-483 (600)
91 PTZ00342 acyl-CoA synthetase; 99.2 1.8E-09 3.9E-14 126.3 23.5 132 293-450 461-615 (746)
92 PRK12467 peptide synthase; Pro 99.2 4.8E-10 1E-14 151.2 21.3 131 293-450 771-934 (3956)
93 PRK08308 acyl-CoA synthetase; 99.2 4.8E-09 1.1E-13 113.8 25.3 59 387-451 278-336 (414)
94 PRK07824 O-succinylbenzoic aci 99.2 6.2E-09 1.3E-13 110.7 24.4 44 403-451 235-278 (358)
95 PRK08180 feruloyl-CoA synthase 99.2 2.2E-09 4.8E-14 122.8 22.3 130 291-450 332-491 (614)
96 PRK12316 peptide synthase; Pro 99.2 3.5E-10 7.7E-15 155.1 17.6 133 292-451 769-931 (5163)
97 TIGR01923 menE O-succinylbenzo 99.2 7.3E-09 1.6E-13 112.5 24.4 58 389-450 291-364 (436)
98 PRK06814 acylglycerophosphoeth 99.1 6E-09 1.3E-13 127.4 26.1 127 293-451 907-1055(1140)
99 PRK08008 caiC putative crotono 99.1 1.3E-08 2.9E-13 113.2 26.5 130 293-450 288-442 (517)
100 PRK05691 peptide synthase; Val 99.1 2.6E-09 5.6E-14 145.4 24.6 133 292-451 1387-1550(4334)
101 PRK05850 acyl-CoA synthetase; 99.1 1.1E-08 2.3E-13 115.9 25.7 63 384-451 391-481 (578)
102 PRK09192 acyl-CoA synthetase; 99.1 9.3E-09 2E-13 116.7 25.1 63 384-451 405-483 (579)
103 PRK08276 long-chain-fatty-acid 99.1 1E-08 2.2E-13 113.7 24.9 130 292-450 261-413 (502)
104 PLN03052 acetate--CoA ligase; 99.1 5.6E-09 1.2E-13 122.1 23.8 132 292-450 470-633 (728)
105 PLN02430 long-chain-fatty-acid 99.1 3.1E-09 6.7E-14 122.9 21.0 132 293-450 383-538 (660)
106 PLN03102 acyl-activating enzym 99.1 2.9E-09 6.2E-14 121.1 19.3 60 388-451 390-465 (579)
107 PF00501 AMP-binding: AMP-bind 99.1 2.8E-09 6E-14 115.1 18.2 118 292-435 276-417 (417)
108 PTZ00216 acyl-CoA synthetase; 99.1 9.2E-10 2E-14 128.1 14.7 132 293-451 428-582 (700)
109 PRK05691 peptide synthase; Val 99.1 4E-09 8.6E-14 143.6 22.6 133 292-451 3982-4147(4334)
110 PRK07008 long-chain-fatty-acid 99.1 3.4E-08 7.3E-13 111.1 26.6 133 292-450 292-453 (539)
111 PRK06178 acyl-CoA synthetase; 99.1 4E-08 8.6E-13 111.1 27.0 121 307-450 341-486 (567)
112 PRK12582 acyl-CoA synthetase; 99.1 2.9E-09 6.2E-14 122.1 17.9 128 292-449 345-502 (624)
113 PRK05620 long-chain-fatty-acid 99.1 3.2E-08 6.9E-13 112.2 26.2 131 294-451 299-475 (576)
114 PRK06018 putative acyl-CoA syn 99.0 9.2E-08 2E-12 107.6 26.3 132 292-450 293-454 (542)
115 KOG1256 Long-chain acyl-CoA sy 99.0 4.1E-09 8.9E-14 118.6 14.8 134 290-450 416-572 (691)
116 PRK08162 acyl-CoA synthetase; 98.9 1E-07 2.2E-12 107.0 22.6 59 389-451 387-461 (545)
117 PRK09029 O-succinylbenzoic aci 98.9 2.2E-07 4.7E-12 102.2 24.4 44 403-451 333-376 (458)
118 PRK12476 putative fatty-acid-- 98.9 2.4E-08 5.2E-13 114.3 16.6 65 384-453 423-522 (612)
119 KOG1175 Acyl-CoA synthetase [L 98.9 1.2E-07 2.5E-12 107.0 21.4 231 293-568 359-623 (626)
120 PRK13391 acyl-CoA synthetase; 98.8 1.9E-07 4.1E-12 104.1 18.8 130 293-451 275-427 (511)
121 PLN02479 acetate-CoA ligase 98.8 1.4E-07 3E-12 106.9 17.5 58 389-450 401-474 (567)
122 PRK13390 acyl-CoA synthetase; 98.7 6.4E-07 1.4E-11 99.5 21.0 129 293-450 270-423 (501)
123 PRK07868 acyl-CoA synthetase; 98.7 1.7E-07 3.6E-12 113.4 17.1 147 292-451 719-881 (994)
124 PRK07798 acyl-CoA synthetase; 98.7 6.5E-07 1.4E-11 99.6 18.9 133 293-451 296-453 (533)
125 PRK07445 O-succinylbenzoic aci 98.7 2.7E-07 5.8E-12 101.9 15.2 61 387-451 298-369 (452)
126 TIGR02372 4_coum_CoA_lig 4-cou 98.7 1E-06 2.2E-11 95.6 19.0 45 403-451 276-320 (386)
127 KOG1180 Acyl-CoA synthetase [L 98.5 3.8E-06 8.2E-11 91.8 18.7 161 267-472 389-574 (678)
128 PF04443 LuxE: Acyl-protein sy 98.3 3.4E-05 7.4E-10 83.0 17.7 81 26-118 31-116 (365)
129 KOG1179 Very long-chain acyl-C 98.1 9E-05 1.9E-09 81.6 16.1 224 306-554 368-623 (649)
130 COG1020 EntF Non-ribosomal pep 97.2 0.014 3.1E-07 67.1 18.1 63 384-450 561-640 (642)
131 PTZ00297 pantothenate kinase; 96.3 0.066 1.4E-06 67.2 15.4 56 390-450 825-881 (1452)
132 PF14535 AMP-binding_C_2: AMP- 95.1 0.073 1.6E-06 46.2 6.8 81 436-533 1-84 (96)
133 PRK09188 serine/threonine prot 94.9 0.11 2.4E-06 56.1 9.0 40 403-451 210-252 (365)
134 KOG1178 Non-ribosomal peptide 69.1 9.4 0.0002 46.6 6.4 45 403-451 455-499 (1032)
135 PRK07445 O-succinylbenzoic aci 64.5 5.9 0.00013 43.7 3.4 28 90-118 120-147 (452)
136 cd04931 ACT_PAH ACT domain of 55.4 68 0.0015 27.5 7.7 58 441-504 25-82 (90)
137 PRK12476 putative fatty-acid-- 49.3 16 0.00036 41.8 3.8 27 90-117 193-219 (612)
138 PF01797 Y1_Tnp: Transposase I 45.5 92 0.002 27.3 7.3 101 424-537 8-117 (121)
139 cd04880 ACT_AAAH-PDT-like ACT 42.5 1.6E+02 0.0035 23.5 7.8 55 443-502 12-66 (75)
140 KOG3628 Predicted AMP-binding 37.9 2.1E+02 0.0045 35.5 10.3 128 384-533 1174-1334(1363)
141 PRK07798 acyl-CoA synthetase; 37.0 17 0.00036 40.3 1.3 23 94-117 167-189 (533)
142 PF11454 DUF3016: Protein of u 35.8 88 0.0019 29.3 5.7 58 385-444 47-114 (141)
143 COG5475 Uncharacterized small 33.6 45 0.00097 26.0 2.7 25 403-430 4-28 (60)
144 cd04905 ACT_CM-PDT C-terminal 31.7 2.8E+02 0.0061 22.5 7.9 45 457-502 24-68 (80)
145 COG2139 RPL21A Ribosomal prote 31.6 34 0.00073 29.7 2.0 35 402-436 31-68 (98)
146 PRK11899 prephenate dehydratas 31.4 3.7E+02 0.008 28.1 10.1 57 441-502 205-261 (279)
147 CHL00123 rps6 ribosomal protei 30.9 2.3E+02 0.0049 24.6 7.2 53 434-487 13-72 (97)
148 KOG1179 Very long-chain acyl-C 30.5 28 0.00061 39.6 1.7 31 386-416 484-520 (649)
149 PF12401 DUF3662: Protein of u 30.3 62 0.0013 29.1 3.6 86 434-530 19-106 (116)
150 PRK04306 50S ribosomal protein 30.0 39 0.00084 29.6 2.2 35 403-437 34-71 (98)
151 PF09926 DUF2158: Uncharacteri 29.9 45 0.00098 25.8 2.3 19 404-425 1-19 (53)
152 PRK11898 prephenate dehydratas 29.6 3.6E+02 0.0078 28.1 9.7 57 441-502 208-264 (283)
153 cd03483 MutL_Trans_MLH1 MutL_T 29.2 2.4E+02 0.0052 25.5 7.4 44 408-453 30-73 (127)
154 PTZ00189 60S ribosomal protein 28.3 46 0.001 31.7 2.5 34 403-436 33-69 (160)
155 cd04904 ACT_AAAH ACT domain of 28.1 3E+02 0.0065 22.2 7.1 54 441-501 11-64 (74)
156 COG0077 PheA Prephenate dehydr 27.9 4E+02 0.0086 27.9 9.5 56 441-501 205-260 (279)
157 PRK09444 pntB pyridine nucleot 26.2 1.8E+02 0.0038 32.5 6.8 78 425-511 303-381 (462)
158 PLN00190 60S ribosomal protein 23.6 60 0.0013 30.9 2.3 34 403-436 33-69 (158)
159 PRK13390 acyl-CoA synthetase; 23.1 40 0.00087 37.2 1.3 19 93-112 151-169 (501)
160 COG1282 PntB NAD/NADP transhyd 21.7 1.2E+02 0.0027 32.7 4.4 57 425-482 305-361 (463)
161 PRK10622 pheA bifunctional cho 20.4 6.5E+02 0.014 27.5 9.9 58 440-502 307-364 (386)
162 PF07311 Dodecin: Dodecin; In 20.1 2.6E+02 0.0056 22.7 5.0 47 437-484 13-60 (66)
No 1
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=2.7e-135 Score=1120.55 Aligned_cols=573 Identities=39% Similarity=0.715 Sum_probs=541.6
Q ss_pred CChHHHHHHHHHHHhcHHHHHHHHHHHHHHHccCChhhHhcCCCCCCChhhhhhcCCCcccccchHHHHHHhcCCCCCCc
Q 007464 8 VDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 87 (603)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~Q~~~L~~iL~~n~~T~ygr~~gf~~i~s~~dF~~~vPv~~Yed~~p~ieR~~~Ge~~~lL 87 (603)
.++++.++.||+.++||.++|+++|++||++|++|+|||+|||++|+++++||++|||++|||++|||+||++||.++||
T Consensus 19 ~~~~~~l~~ie~~t~~~~~vQ~~vL~~IL~~n~~Teyg~~~~f~~i~~~~~F~~~VPv~~Yedl~pyI~Ri~~Ge~s~vL 98 (612)
T PLN02620 19 EKNKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGRTDRETFKKVMPVITYEDIQPDINRIANGDTSPIL 98 (612)
T ss_pred cchHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCCCCHHHHHHhCCCccHHHhHHHHHHHHcCCCCCcc
Confidence 34477889999999999999999999999999999999999999999999999999999999999999999999977999
Q ss_pred cCCCcceeeccccCCCCCcccccCChHHHHHHHHHHHHHHHHHhccCC-CCCCceEEEeecccccccCCCCeEecccccc
Q 007464 88 TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNV 166 (603)
Q Consensus 88 ~~~pi~~f~~TSGTT~G~~K~IP~t~~~l~~~~~~~~~~~~~~~~~~p-~~~Gk~l~~~~~~~~~~t~~Gi~~g~~S~~~ 166 (603)
|++||++|++|||||+|++|+||+|+++++++..++.+|..++++++| +..||.|||++.+.+.+|++|+|+|++|+.+
T Consensus 99 ~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~~~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~g~~st~~ 178 (612)
T PLN02620 99 CSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIKSEAKTPGGLVARPVLTSY 178 (612)
T ss_pred CCCChhhhhhcCCCCCCceeeeecCHHHHHHHHHHHHHHHHHHHhhCCCcccCcEEEEEecccCccCCCCcccccccchh
Confidence 999999999999999889999999999999888888999999999888 8999999999999999999999999999999
Q ss_pred ccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeecchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 007464 167 YRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246 (603)
Q Consensus 167 ~~~~~f~~~~~~~~~~~~~P~e~~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~f~~~ll~~~~~l~~~w~~l~~dI~~g~ 246 (603)
+++.+|+.++..+...|++|.+++.++|..|+|||||||+|+++++|..++++|+++|++++++|+++|++||+||++|+
T Consensus 179 y~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~v~~v~svfa~~ll~a~~~Le~~w~~L~~DI~~G~ 258 (612)
T PLN02620 179 YKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWTLLCRDIRTGT 258 (612)
T ss_pred hhhhhhhhcccccccceeCcHHhccCCCHHHHHHHHHHHHhhcchhhceEEeechHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999988887777789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecChHHHHHHHHHHhCCCCeeccc
Q 007464 247 LSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSAD 326 (603)
Q Consensus 247 ~~~~i~~~~~R~~l~~~l~~~p~~A~~l~~~~~~~~~~~gi~~~lWP~L~~i~~~~~G~~~~y~~~l~~~~gg~~i~~~~ 326 (603)
++++++++++|+++.+.|+|||++|++|+++|.+. +|+|++++|||||++|+||++|+|++|.+.|+.|+||+|+++.+
T Consensus 259 ls~~itd~~~R~av~~~L~p~pelA~~i~~~c~~~-~w~gii~rLWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~ 337 (612)
T PLN02620 259 IDSQITDPSVREAVMKILKPDPKLADFVEAECRKE-SWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTM 337 (612)
T ss_pred CCccCCCHHHHHHHHhhcCCCHHHHHHHHHHhccc-cccCcHHHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCcccccc
Confidence 99999999999999999999999999999999985 99999999999999999999999999999999999999999999
Q ss_pred cccCcccceecCCCCCCccccceeecCCceEEEEEeCCCCCccc-c---------cccCCCccccccccCCCCeEEEEEc
Q 007464 327 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES-Q---------VLCIEPKPVGLTEVKVGEEYEIIVT 396 (603)
Q Consensus 327 YgaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~-~---------~~~~~~~~v~l~eve~G~~yELVvT 396 (603)
|+||||.+|+|++|.|+++.+.|++.|+.+||||||.+ +++. . +..+++++|+++||+.|++||||||
T Consensus 338 Y~ASE~~~ginl~P~~~p~~~sy~L~p~~~yFEFip~~--~~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvT 415 (612)
T PLN02620 338 YASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVH--RNNGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVT 415 (612)
T ss_pred ccccceEEEeccCCCCCcccceeeecCCcEEEEEeecc--CcccccccccccccccccccCccccHHHccCCCeEEEEEE
Confidence 99999999999999998888999999999999999986 3211 0 0123567899999999999999999
Q ss_pred cccceeeceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCc
Q 007464 397 NVAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPG 476 (603)
Q Consensus 397 t~~GL~RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~ 476 (603)
|++||||||+||||+|+||||++|+|+|+||.+.+++++|||++|++|..||.+|...|...+++|+||++++|.++.||
T Consensus 416 t~~GLyRYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~dyts~~d~~~~Pg 495 (612)
T PLN02620 416 TYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDASLTEYTSYADTSTIPG 495 (612)
T ss_pred ecCceEEEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHHHHhhcccCceeeeEEeccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999877667999999999999888999
Q ss_pred eEEEEEEec--cC--CCHHHHHHHHHHHHHhccChhhHHHhhcC-CcCCeEEEEeccChHHHHHHHHhcCCCCCCCCCcC
Q 007464 477 HYVIFWEVS--GE--VNDEVLKECCNCLDRSFVDAGYVSARKVN-AIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTP 551 (603)
Q Consensus 477 hy~l~vE~~--~~--~~~~~l~~~~~~ld~~L~n~~Y~~~R~~g-~l~p~~v~~v~~GtF~~~~~~~~~~G~~~~Q~K~P 551 (603)
||++|||+. ++ ++.+.+++||..||++| |++|+.+|..+ +|+|++|++|++|||+++|++++++|++.+|||+|
T Consensus 496 hYvl~~El~~~~~~~~~~~~l~~cc~~lE~~L-n~~Yr~~R~~~~sIgPLeirvv~~GtF~~l~~~~~~~G~s~~QyK~P 574 (612)
T PLN02620 496 HYVLFWELCLNGSTPIPPSVFEDCCLTIEESL-NSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKTP 574 (612)
T ss_pred ceEEEEEEecCCCCCCCHHHHHHHHHHHHHHh-CHHHHHHHhcCCcCCCcEEEEeCCChHHHHHHHHHHcCCccccccCc
Confidence 999999983 22 46679999999999998 99999999986 59999999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHHhcccceEEeccCCCCcccceE
Q 007464 552 RCVGPTNKTVLQILCNNIGIEIFSGSLGLLIVNCV 586 (603)
Q Consensus 552 r~~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~~~ 586 (603)
||++ +++++++|+++|+++|||+++|+|.|++.
T Consensus 575 r~v~--~~~~~~~l~~~v~~~~~s~~~~~~~~~~~ 607 (612)
T PLN02620 575 RCVK--FAPIIELLNSRVVSNYFSPKCPKWVPGHK 607 (612)
T ss_pred eEec--CHHHHHHHHhhhheeeccccCCCCCcccc
Confidence 9999 99999999999999999999999999854
No 2
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=2.8e-133 Score=1107.20 Aligned_cols=578 Identities=39% Similarity=0.692 Sum_probs=542.5
Q ss_pred CCccccCCChHHHHHHHHHHHhcHHHHHHHHHHHHHHHccCChhhHhcCCCCCCChhhhhhcCCCcccccchHHHHHHhc
Q 007464 1 MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIID 80 (603)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~L~~iL~~n~~T~ygr~~gf~~i~s~~dF~~~vPv~~Yed~~p~ieR~~~ 80 (603)
|+|.++..++++.++.||..++||.++|+++|++||++|++|+|||+|.| +|.++++||++|||++|||++|||+||++
T Consensus 1 ~~~~~~~~~~~~~~~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~~~-~i~~~e~Fk~~VPv~~Yedl~pyI~Ri~~ 79 (606)
T PLN02247 1 MLPSYDPNDNEAGLKLLEDLTTNACQIQQQVLEEILTQNAGTEYLRSFLD-GESDKQSFKNKVPVVNYEDIKPCIERIAN 79 (606)
T ss_pred CCCccCCcchHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhhhhcCc-cCCCHHHHHHhCCCccHHHhHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999855 89999999999999999999999999999
Q ss_pred CCCCCCccCCCcceeeccccCCCCCcccccCChHHHHHHHHHHHHHHHHHhccCC-CCCCceEEEeecccccccCCCCeE
Q 007464 81 GDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNA 159 (603)
Q Consensus 81 Ge~~~lL~~~pi~~f~~TSGTT~G~~K~IP~t~~~l~~~~~~~~~~~~~~~~~~p-~~~Gk~l~~~~~~~~~~t~~Gi~~ 159 (603)
||.+++++++||.+|++|||||+|++|+||+|++++++...++.+|..++++.+| +..||.||+++.+.+.+|++|+|+
T Consensus 80 Ge~~~llt~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~l~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~ 159 (606)
T PLN02247 80 GESSSIISAQPITELLTSSGTSGGQPKLMPSTAEELDRKTFFYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSGLMA 159 (606)
T ss_pred CCCCceeCCCCcceeeccCCCCCCceeEeeccHHHHHHHHHHHHHHHHHHHhcCCCcccCcEEEEEecCcCccCCCCccc
Confidence 9966667799999999999999889999999999998877778899999999877 889999999999999999999999
Q ss_pred eccccccccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeecchhHHHHHHHHHHHHHHHHH
Q 007464 160 GTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 239 (603)
Q Consensus 160 g~~S~~~~~~~~f~~~~~~~~~~~~~P~e~~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~f~~~ll~~~~~l~~~w~~l~ 239 (603)
|++++.++++.+|+.++......|++|.++++++|..|+|||||||+|.+++++..++++|+++|++++++|+++|++||
T Consensus 160 g~~~t~y~~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~vl~v~svfa~s~l~a~~~Le~~we~L~ 239 (606)
T PLN02247 160 RPVLTSYYKSSNFRNRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKELC 239 (606)
T ss_pred ccccchhhccccccccccccccceeCcHHhhcCCCHHHHHHHHHHHHhhccccccEEEEeccHHHHHHHHHHHHHHHHHH
Confidence 99999999999998777665568999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCchHHHHHhhccC-CCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecChHHHHHHHHHHhC
Q 007464 240 DDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAG 318 (603)
Q Consensus 240 ~dI~~g~~~~~i~~~~~R~~l~~~l-~~~p~~A~~l~~~~~~~~~~~gi~~~lWP~L~~i~~~~~G~~~~y~~~l~~~~g 318 (603)
+||++|++++++++|++|+++.+.+ +|||++|++|+++|.+. +|.|++++|||||++|+||++|+|++|.+.|++|+|
T Consensus 240 ~DI~~G~ls~~it~p~~R~a~~~~l~~p~peLA~~l~~~c~~~-~w~gi~~rLWP~lk~I~~~~tGsm~~Y~~~L~~y~g 318 (606)
T PLN02247 240 SNIRTGCVSDWITDPSCRNAVSSILSKPNSELADLIESECSGK-SWEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSG 318 (606)
T ss_pred HHHhcCCcccccCCHHHHHHHhhcccCCCHHHHHHHHHHhccc-CccccHHHhCCCCcEEEEECCCCHHHHHHHHHHHcC
Confidence 9999999999999999999999999 69999999999999985 999999999999999999999999999999999999
Q ss_pred CCCeeccccccCcccceecCCCCCCccccceeecCCceEEEEEeCCCCCcccc----------cc-----cCCCcccccc
Q 007464 319 DLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ----------VL-----CIEPKPVGLT 383 (603)
Q Consensus 319 g~~i~~~~YgaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~----------~~-----~~~~~~v~l~ 383 (603)
|+|+++.+|+||||.+|+|++|.|+++.+.|+++|+.+||||||.+ +.+.+ +. .+++++|+++
T Consensus 319 glpl~s~~Y~sSE~~~ginl~p~~~p~~~sy~L~p~~~yFEFip~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 396 (606)
T PLN02247 319 GLPLVSTMYASSECYFGINLKPLSDPSDVSYTLLPNMAYFEFLPVD--KNNGEVIHFVQCNGTDDDDDALKEDLEIVDLV 396 (606)
T ss_pred CCceecccccccceEEEeccCcCCCccCCceeecCCcEEEEEeecC--CCcccccccccccccccccccccccCceecHH
Confidence 9999999999999999999999998888899999999999999986 32110 00 1245699999
Q ss_pred ccCCCCeEEEEEccccceeeceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeE
Q 007464 384 EVKVGEEYEIIVTNVAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVV 463 (603)
Q Consensus 384 eve~G~~yELVvTt~~GL~RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~ 463 (603)
||+.|++|||||||++||||||+||||+|+||||++|+|+|+||.+.+++++|||++|+++..||.+|.+.|++.++.++
T Consensus 397 evk~G~~YelVvTt~~GLYRYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~ 476 (606)
T PLN02247 397 DVKVGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPLGFLLT 476 (606)
T ss_pred HccCCCeEEEEEEecCceEEEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHHHHhhcccCeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887756689999
Q ss_pred eeEEeecCCCCCceEEEEEEecc-------CCCHHHHHHHHHHHHHhccChhhHHHhhcC-CcCCeEEEEeccChHHHHH
Q 007464 464 DFTSHVDLSTDPGHYVIFWEVSG-------EVNDEVLKECCNCLDRSFVDAGYVSARKVN-AIGPLELRVVLKGTFQQIL 535 (603)
Q Consensus 464 ~f~~~~~~~~~~~hy~l~vE~~~-------~~~~~~l~~~~~~ld~~L~n~~Y~~~R~~g-~l~p~~v~~v~~GtF~~~~ 535 (603)
||++++|.++.||||++|||+.. +.+...+++||..||++| |++|+.+|..+ +|+|++|++|++|||+++|
T Consensus 477 d~ts~~d~~~~PghYvlf~El~~~~~~~~~~~~~~~l~~cc~~lE~~L-n~~Yr~~R~~~~~igPLeirvv~~GtF~~l~ 555 (606)
T PLN02247 477 EYTSYADTSSIPGHYVLFWELKTRGSNDPPELDPKIMEQCCSTVEESL-DSVYRRCRKRDKSIGPLEIRVVKHGTFDALM 555 (606)
T ss_pred eeecccccCCCCCceEEEEEeecCCCCccccchHHHHHHHHHHHHHHh-hHHHHHHhhccCcCCCcEEEEeCCChHHHHH
Confidence 99999998889999999999952 134568999999999998 99999999985 9999999999999999999
Q ss_pred HHHhcCCCCCCCCCcCcccCCCCHHHHHHHhcccceEEeccCCCCcccce
Q 007464 536 DHYLGLGAALSQFKTPRCVGPTNKTVLQILCNNIGIEIFSGSLGLLIVNC 585 (603)
Q Consensus 536 ~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~~ 585 (603)
++++++|++.+|||+|||++ +++++++|+++|+++|||+++|+|.|+.
T Consensus 556 ~~~~~~G~s~~Q~K~Pr~v~--~~~~~~~l~~~v~~~~~s~~~~~~~~~~ 603 (606)
T PLN02247 556 DFCVSQGSSVNQYKTPRCIK--SEEALKILDSRVIGRFFSKRVPFWEPFG 603 (606)
T ss_pred HHHHHcCCCcccccCceEec--CHHHHHHHHhhhheeeccccCCCCCccc
Confidence 99999999999999999999 9999999999999999999999999984
No 3
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=6.4e-125 Score=1049.67 Aligned_cols=568 Identities=41% Similarity=0.717 Sum_probs=523.4
Q ss_pred CCChHHHHHHHHHHHhcHHHHHHHHHHHHHHHccCChhhHhcCCCCCCChhhhhhcCCCcccccchHHHHHHhcCCCCCC
Q 007464 7 TVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPI 86 (603)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~Q~~~L~~iL~~n~~T~ygr~~gf~~i~s~~dF~~~vPv~~Yed~~p~ieR~~~Ge~~~l 86 (603)
..++++.++.+|+.++||.++|+++|++||++|++|+|||+|||++|+++++||++|||++|||++|||+||++||.++|
T Consensus 17 ~~~~~~~l~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~gf~~i~~~~~F~~~VPv~~Yedl~pyIeRi~~Ge~~~v 96 (597)
T PLN02249 17 SEKDVKALKFIEEMTRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAVDRKTFKSKVPVVTYEDLKTEIQRISNGDRSPI 96 (597)
T ss_pred CCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCCCCHHHHHHhCCCccHHHhHHHHHHHHcCCCCce
Confidence 34456778999999999999999999999999999999999999999999999999999999999999999999986779
Q ss_pred ccCCCcceeeccccCCCCCcccccCChHHHHH--HHHHHHHHHHHHhccCC-CCCCceEEEeecccccccCCCCeEeccc
Q 007464 87 LTGKPITTISRSSGTTQGKPKFLPFNDELMET--TLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTAT 163 (603)
Q Consensus 87 L~~~pi~~f~~TSGTT~G~~K~IP~t~~~l~~--~~~~~~~~~~~~~~~~p-~~~Gk~l~~~~~~~~~~t~~Gi~~g~~S 163 (603)
||++||.+|++|||||+|++|+||+|+++++. +..++.+| ..+..+| ++.||.|++++.+.+.+|++|+|+|+.+
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~~~~~~~~~~~~--~~~~~~~~l~~Gk~l~~~~~~~~~~t~gG~p~~~~~ 174 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMP--VMNLYVPGLDKGKGLYFLFVKSESKTSGGLPARPAL 174 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHHHHHHHHHHHHHH--HHhccCCccccCcEEEEEeccccccCCCCCccCccc
Confidence 99999999999999999999999999999983 33346555 3344456 8899999999999999999999999999
Q ss_pred cccccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeecchhHHHHHHHHHHHHHHHHHHHHH
Q 007464 164 TNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIR 243 (603)
Q Consensus 164 ~~~~~~~~f~~~~~~~~~~~~~P~e~~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~f~~~ll~~~~~l~~~w~~l~~dI~ 243 (603)
+.++++..|+..+. ...|++|.+++.+.|..++|||||||||+.++++..|++.||+.+++++++|+++|+++|+||+
T Consensus 175 ~~~~~~~~f~~~~~--~~~~~~P~ev~~~~D~~~~~Y~~lL~gL~~~~~~~~i~~~~Ps~l~~~~~~l~~~weel~~dI~ 252 (597)
T PLN02249 175 TSYYKSDHFRTSDY--DNVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKELAQDIS 252 (597)
T ss_pred cccccccccccccc--cccccCcHHhhcCCCHHHHHHHHHHHHHhhccccceEEEECcHHHHHHHHHHHHHHHHHHHHHH
Confidence 98778777765543 5689999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCchHHHHHhhccC-CCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecChHHHHHHHHHHhCCCCe
Q 007464 244 EGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPL 322 (603)
Q Consensus 244 ~g~~~~~i~~~~~R~~l~~~l-~~~p~~A~~l~~~~~~~~~~~gi~~~lWP~L~~i~~~~~G~~~~y~~~l~~~~gg~~i 322 (603)
+|+++.++++|++|+.|..++ .|+|++|++|+++|.+. +|+|++++|||||++|+||++|||.+|++.+++++|++++
T Consensus 253 ~g~~~~~~~~~~~~~~v~~i~g~P~~~la~~i~~~~~~~-~~~gii~~lWPnl~~i~~~~~G~~~~Y~~~l~~~~g~~~~ 331 (597)
T PLN02249 253 TGTLSSKIFDPAIKNRMSKILNKPDQELAEFLIGVCSQE-NWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYSGGLPM 331 (597)
T ss_pred hCCCcccccchHHHHHHHhhcCCCCHHHHHHHHHHhccc-cccccHHHhCCCCCeEEEEecCChHHHHHHHHHHcCCCcc
Confidence 999999999999999999988 79999999999999875 8999999999999999999999999999999999999999
Q ss_pred eccccccCcccceecCCCCCCccccceeecCCceEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEcccccee
Q 007464 323 MSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAGLY 402 (603)
Q Consensus 323 ~~~~YgaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~~GL~ 402 (603)
++++|+||||++|+|+++.|+++.++|+++|+++||||||.+ +.++ ...+++++|+++|||.|++|||||||++|||
T Consensus 332 ~~~~Y~ASEg~~gi~~~~~~~p~~~~~~l~~~~~ffEFiP~~--~~~~-~~~~~~~~v~l~eVe~G~~Y~lVvTT~~GLy 408 (597)
T PLN02249 332 ASTIYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLPHN--HDGD-GALDETSLVELADVEVGKEYELVITTYAGLY 408 (597)
T ss_pred ccccccccceEEEeecCCCCCCCCcceEecCCcEEEEeeecc--cCCc-ccCCCCcEecHHHcCCCCeEEEEEEccccee
Confidence 999999999999999999888777899999999999999987 4321 0113578999999999999999999999999
Q ss_pred eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEE
Q 007464 403 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFW 482 (603)
Q Consensus 403 RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~hy~l~v 482 (603)
||++||+|+|+||+|++|+|+|+||++.++|++|||++|++++.||.+|...++..|+.|.||++.++.++.|+||++||
T Consensus 409 RY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~a~~~~~~~~~~v~eft~~~~~~~~p~Hyvl~w 488 (597)
T PLN02249 409 RYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSYAETKTIPGHYVIYW 488 (597)
T ss_pred EeecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHHHHHHhhhcCceEEEeEEecCCCCCCCceEEEE
Confidence 99999999999999999999999999999999999999999999999987666678999999999888877799999999
Q ss_pred Eecc------CCCHHHHHHHHHHHHHhccChhhHHHhhcC-CcCCeEEEEeccChHHHHHHHHhcCCCCCCCCCcCcccC
Q 007464 483 EVSG------EVNDEVLKECCNCLDRSFVDAGYVSARKVN-AIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCVG 555 (603)
Q Consensus 483 E~~~------~~~~~~l~~~~~~ld~~L~n~~Y~~~R~~g-~l~p~~v~~v~~GtF~~~~~~~~~~G~~~~Q~K~Pr~~~ 555 (603)
|+.. ..+.+.+++||+.++++| |.+|+++|..+ +|+||+|++|++|+|.+|+++++++|+++||||+|||++
T Consensus 489 ei~~~~~~~~~~~~~~~~~~~~~~e~~l-n~~Y~~~R~~~~~L~pl~v~vv~~GtF~~~~~~~~~~G~~~gQ~K~Prl~~ 567 (597)
T PLN02249 489 ELLGRDQSNALPSDEVMAKCCLEMEESL-NSVYRQSRVSDKSIGPLEIRVVQNGTFEELMDYAISRGSSINQYKVPRCVS 567 (597)
T ss_pred EEeccccccCCCCHHHHHHHHHHHHHHh-CHHHHHHHhcCCccCCeEEEEeCCchHHHHHHHHHhCCCcCCCcCCceEeC
Confidence 9932 246678899999999997 99999999885 899999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhcccceEEeccCCCCcccce
Q 007464 556 PTNKTVLQILCNNIGIEIFSGSLGLLIVNC 585 (603)
Q Consensus 556 ~~~~~~~~~l~~~~~~~~~s~~~~~~~~~~ 585 (603)
+++++++|+++|+++|||+++|+|.|+.
T Consensus 568 --~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 595 (597)
T PLN02249 568 --LTPIMELLDSRVVSAHFSPSLPHWSPER 595 (597)
T ss_pred --CHHHHHHHHhhhheeeccccCCCCCCCC
Confidence 9999999999999999999999999973
No 4
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=100.00 E-value=1.7e-113 Score=956.17 Aligned_cols=513 Identities=38% Similarity=0.669 Sum_probs=409.2
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHccCChhhHhcCCCCCCChhh--hhhcCCCcccccchHHHHHHhcCCCCCCccCC
Q 007464 13 LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPES--FKSCVPLVTHEDLQPYIQRIIDGDISPILTGK 90 (603)
Q Consensus 13 ~~~~~~~~~~~~~~~Q~~~L~~iL~~n~~T~ygr~~gf~~i~s~~d--F~~~vPv~~Yed~~p~ieR~~~Ge~~~lL~~~ 90 (603)
.+++|++.++||+++|+++|++||+.|++|+|||+|||++|++++| ||++|||++||||+|||+||++|| .+|||++
T Consensus 2 ~l~~f~~~~~~~~~~Q~~~L~~iL~~n~~T~yGr~~gf~~i~s~ed~~Fr~~VPi~~Yed~~pyIeR~~~Ge-~~vL~~~ 80 (528)
T PF03321_consen 2 VLKRFEKATKNPEQVQEEVLREILRRNADTEYGRDHGFAGIRSVEDESFRKRVPITDYEDYRPYIERIAEGE-ENVLTPG 80 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHCTTSHHHHCTT--S----HHHHHHHHS--BEHHHHHHHHHHHHTT---CCTSSS
T ss_pred hHHHHHHHHhCHHHHHHHHHHHHHHhhccCHhHHhcCCCCCCCcchHHHHHhCCCccHHHHHHHHHHHhcCC-CCCCCCC
Confidence 4789999999999999999999999999999999999999999999 999999999999999999999999 5699999
Q ss_pred CcceeeccccCCCCCcccccCChHHHHHHH--HHHHHHHHHHhccCC-C-CCCc--eEEEeecccccccCCCCeEecccc
Q 007464 91 PITTISRSSGTTQGKPKFLPFNDELMETTL--QIFRTSYAFRNREFP-I-GKGK--ALQFIYGSKQSKTKGGLNAGTATT 164 (603)
Q Consensus 91 pi~~f~~TSGTT~G~~K~IP~t~~~l~~~~--~~~~~~~~~~~~~~p-~-~~Gk--~l~~~~~~~~~~t~~Gi~~g~~S~ 164 (603)
||.+|+.||||||+++|+||+|++++..+. .++..|..++.+++| . ..|| .|.+.+.+...+|++|+|+|++|+
T Consensus 81 ~~~~f~~TSGTTg~~~K~IP~T~~~l~~~~~~~~~~~~~~~l~~~~p~~~~~gk~~~l~~~~~~~~~~t~~Gi~~g~~s~ 160 (528)
T PF03321_consen 81 PPIYFALTSGTTGGKSKLIPYTKEFLKEFRRLGAIAAWLYYLYRNFPGLLFQGKSLYLSFSFAPPPLRTPGGIPIGSISG 160 (528)
T ss_dssp --SEEEEEEEEETTEEEEEEESHHHHHHHHHHHHHHHHH--HHHHSSS--TTSE--EEEE------EE-TTS-EEE-HHH
T ss_pred CCCeEEeCCCCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHhcCcccccCCcceEEEeecCCCcccCCCCeEEecccc
Confidence 999999999999555999999999998865 457788888999999 5 6789 444445578889999999999999
Q ss_pred ccccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeecchhHHHHHHHHHHHHHHHHHHHHHh
Q 007464 165 NVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIRE 244 (603)
Q Consensus 165 ~~~~~~~f~~~~~~~~~~~~~P~e~~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~f~~~ll~~~~~l~~~w~~l~~dI~~ 244 (603)
+.+++ .+.++..+|++|.+++.+.|.++++||||+|+|++++||++|+++||++|+.++++|+++|+++|+||++
T Consensus 161 ~~~~~-----~~~~~~~~~~~P~~~~~~~~~~~~~y~~ll~~l~~~~~l~~i~~~~p~~l~~~~~~le~~~~~l~~dI~~ 235 (528)
T PF03321_consen 161 IPYRM-----IPPWFRSWFTSPSEVIAAIDDWEAKYCHLLCALLQDRDLRMISGWFPSFLLLLFRLLEKHWEELVEDIRD 235 (528)
T ss_dssp HHHT-------SCCHHG-BSS-HHHHT-S-HHHHHHHHHHHHHHCGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhh-----ChHHHccCccCCHHHHhcccHHHHHHHHHHHHhhcccCcCEEEeeCHHHHHHHHHHHHHhhhHhhHHhcC
Confidence 98874 3333345899999999999999999999999999889999999999999999999999999999999999
Q ss_pred cccCCCCCchHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecChHHHHHHHHHHhCCCCeec
Q 007464 245 GVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMS 324 (603)
Q Consensus 245 g~~~~~i~~~~~R~~l~~~l~~~p~~A~~l~~~~~~~~~~~gi~~~lWP~L~~i~~~~~G~~~~y~~~l~~~~gg~~i~~ 324 (603)
|+++ .++|||+||++|+++|.+ + .|++++|||||++|+||++|+|.+|+++|++++|++++++
T Consensus 236 G~~~--------------~~~p~p~rA~~L~~~~~~--~-~~~~~~lWP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~ 298 (528)
T PF03321_consen 236 GTLS--------------LLRPNPERAAELRAEFEK--G-RGIPKRLWPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQS 298 (528)
T ss_dssp TS----------------C-S--HHHHHHHHHHHCC--S-TTHHHHHSTT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE
T ss_pred Cccc--------------cCCCCHHHHHHHHHhhcc--c-CCCHHHhCCCCcEEEEEcCCChHHHHHHHHHHcCCCceee
Confidence 9996 467999999999999998 6 7899999999999999999999999999999999999999
Q ss_pred cccccCcccceecCCCCCCccccceeecCCceEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEccccceeec
Q 007464 325 ADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAGLYRY 404 (603)
Q Consensus 325 ~~YgaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~~GL~RY 404 (603)
.+|+||||++|+|++++. .+|.+.|+.+||||||.+ +.+++ ..+++++++++||+.|++|||||||.+|||||
T Consensus 299 ~~y~ASEg~i~i~~~~~~----~~~~l~~~~~ffEFip~~--~~~~~-~~~~~~~l~~~ele~G~~YelviTt~~GLyRY 371 (528)
T PF03321_consen 299 KGYGASEGFIGIPLDPED----PGYVLAPDSGFFEFIPVD--EDEQN-PSEQPKTLLLHELEVGEEYELVITTNSGLYRY 371 (528)
T ss_dssp -EEEETTEEEEEES-CCC------EEE-TTSSEEEEEE-S--TT--------SSSEEGGG--TT-EEEEEEESTTS-SSE
T ss_pred ccccccceEEEEecCCCC----CceEeecCCeEEEEEecc--CCccc-ccCCCceecHHHhcCCCeEEEEEecccceeee
Confidence 999999999999988443 468899999999999998 43310 11468999999999999999999999999999
Q ss_pred eeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeec-CCCCCceEEEEEE
Q 007464 405 RLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD-LSTDPGHYVIFWE 483 (603)
Q Consensus 405 r~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~-~~~~~~hy~l~vE 483 (603)
|+||||+|+||+|++|+|+|+||.++++|+.|||++|.+|++||.++++ +.|+++.+|++.++ .++.+|||++|||
T Consensus 372 ~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~---~~~~~~~~f~~~~~~~~~~~~~Y~~~~e 448 (528)
T PF03321_consen 372 RIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQ---ETGLELRDFTVAPDPSSGNPPHYVLFWE 448 (528)
T ss_dssp EECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHH---CTT-EEEEEEEEEE--SSSSBEEEEEEE
T ss_pred ecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHH---hcCCceeeEEEEeecccCCCCceEEEEE
Confidence 9999999999999999999999999999999999999999999999976 78999999999999 6788999999999
Q ss_pred eccCCCHHHHHHHHHHHHHhc--cChhhHHHhhc-CCcCCeEEEEeccChHHHHHHHHhcC-CCCCCCCCcCcccCCCCH
Q 007464 484 VSGEVNDEVLKECCNCLDRSF--VDAGYVSARKV-NAIGPLELRVVLKGTFQQILDHYLGL-GAALSQFKTPRCVGPTNK 559 (603)
Q Consensus 484 ~~~~~~~~~l~~~~~~ld~~L--~n~~Y~~~R~~-g~l~p~~v~~v~~GtF~~~~~~~~~~-G~~~~Q~K~Pr~~~~~~~ 559 (603)
+... .+.++.|++.||++| .|++|+.+|+. |+|+|++|++|++|+|++|+++++++ |++.+|||+|||++ ++
T Consensus 449 ~~~~--~~~~~~~~~~lD~~L~~~n~~Y~~~R~~~g~L~p~~v~~v~~g~f~~~~~~~~~~~G~~~~Q~K~pr~~~--~~ 524 (528)
T PF03321_consen 449 LEGE--PDDLEELAKALDESLQELNPHYRRARESDGQLGPPRVHIVRPGTFDALMERAVARLGGSAGQYKVPRLIR--DR 524 (528)
T ss_dssp ECS---HHHHHHHHHHHHHCS----HHHHHHHHTSTSC---EEEEE-TTHHHHHHHHHHCT-T--SSS----SS----TC
T ss_pred eCCC--chHHHHHHHHHHHHhhhCCchHHHHHhhcCCcCCcEEEEeCcchHHHHHHHHhhcCCCCccceeCccccC--cc
Confidence 9655 458889999999998 59999999999 99999999999999999999999999 99999999999999 88
Q ss_pred HHH
Q 007464 560 TVL 562 (603)
Q Consensus 560 ~~~ 562 (603)
++.
T Consensus 525 ~~~ 527 (528)
T PF03321_consen 525 EFV 527 (528)
T ss_dssp HHH
T ss_pred ccC
Confidence 874
No 5
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.96 E-value=4.4e-27 Score=251.34 Aligned_cols=397 Identities=19% Similarity=0.225 Sum_probs=253.9
Q ss_pred HHHHHHhc-HHHHHHHHHHHHHHH-ccCChhhHhc----CC--CCCCChhhhhhcCCCcccccchHHHH-HHhcCCCCCC
Q 007464 16 EFETITKD-AERIQRETLRKILEE-NASAEYLQNL----GL--NGRTDPESFKSCVPLVTHEDLQPYIQ-RIIDGDISPI 86 (603)
Q Consensus 16 ~~~~~~~~-~~~~Q~~~L~~iL~~-n~~T~ygr~~----gf--~~i~s~~dF~~~vPv~~Yed~~p~ie-R~~~Ge~~~l 86 (603)
+++.+.++ .++.|++.|+.+++. .+|++|+|++ |+ ..|.+.+|+. ++|++++++++.... ++.+...
T Consensus 14 ~~e~~~r~eL~~lq~~rl~~~~k~~yeNsPfYr~~f~~~~v~p~~i~~l~Dl~-klP~t~K~~lre~ypf~~~~~~~--- 89 (438)
T COG1541 14 EIETLSRKELEKLQEKRLKSTVKYVYENSPFYRKKFKEAGVDPDDIKTLEDLA-KLPFTTKDDLRENYPFGDFAVPK--- 89 (438)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHcCCChHHhhCHHHHH-hCCCCcHHHHHHhCCcccccccc---
Confidence 34444444 788999999999998 8999999997 44 4688999999 799999999988776 5555442
Q ss_pred ccCCCcceeeccccCCCCCcccccCChHHHHHHHHHHHHHHHHHhccCCCCCCceEEEeecccccccCCCCeEecccccc
Q 007464 87 LTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNV 166 (603)
Q Consensus 87 L~~~pi~~f~~TSGTT~G~~K~IP~t~~~l~~~~~~~~~~~~~~~~~~p~~~Gk~l~~~~~~~~~~t~~Gi~~g~~S~~~ 166 (603)
+.+..+..||||| |+|+.+|+|...+......+...+. . .....|..+.+..+ -|+..|.. +..
T Consensus 90 ---~~i~~ihaSSGTT-GkPt~~~~t~~D~~~wa~~~aR~~~---~-~g~~~gd~v~~~~~-------yGl~tgg~-~~~ 153 (438)
T COG1541 90 ---EEIVRIHASSGTT-GKPTVFGYTAKDIERWAELLARSLY---S-AGVRKGDKVQNAYG-------YGLFTGGL-GLH 153 (438)
T ss_pred ---cceEEEEccCCCC-CCceeeecCHHHHHHHHHHHHHHHH---H-ccCCCCCEEEEEee-------eccccCCc-hhH
Confidence 3465689999999 9999999998766432211111000 0 00233433332222 11111110 000
Q ss_pred ccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeecchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 007464 167 YRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 246 (603)
Q Consensus 167 ~~~~~f~~~~~~~~~~~~~P~e~~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~f~~~ll~~~~~l~~~w~~l~~dI~~g~ 246 (603)
+ .+. . ......|. ++. +-+.-++-|.+-.
T Consensus 154 ~-----ga~--r-ig~~vip~--------------------------------~~g-----------~~~~~~~l~~df~ 182 (438)
T COG1541 154 Y-----GAE--R-IGATVIPI--------------------------------SGG-----------NTERQLELMKDFK 182 (438)
T ss_pred H-----HHH--h-hCEEEEcc--------------------------------CCc-----------cHHHHHHHHHhcC
Confidence 0 000 0 00111121 110 1111111122111
Q ss_pred cCCCCCchHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecC---hHHHHHHHHHHhCCCCee
Q 007464 247 LSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLM 323 (603)
Q Consensus 247 ~~~~i~~~~~R~~l~~~l~~~p~~A~~l~~~~~~~~~~~gi~~~lWP~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~ 323 (603)
+ ..|.+.|+....+|+++++. |..++-. +++ .++.|+ .+..++.+++.| |++.+
T Consensus 183 ~----------tvI~~tps~~l~lae~~~~~--------G~~~~~~-~lk---~~i~gaE~~see~R~~ie~~~-g~~~~ 239 (438)
T COG1541 183 P----------TVIAATPSYLLYLAEEAEEE--------GIDPDKL-SLK---KGIFGAEPWSEEMRKVIENRF-GCKAF 239 (438)
T ss_pred C----------cEEEEChHHHHHHHHHHHHc--------CCChhhc-cee---EEEEecccCCHHHHHHHHHHh-CCcee
Confidence 1 12445555555667776654 3222211 466 667776 588999999999 68998
Q ss_pred ccccccCcc-cceecCCCCCCccccceeecCCceEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEccc----
Q 007464 324 SADYGSSEG-WIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---- 398 (603)
Q Consensus 324 ~~~YgaSEg-~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~---- 398 (603)
+.||+||+ ++| . .+|.... ++|++.|+.++|.++++ . ++ .|..|+.||||+||+
T Consensus 240 -diYGltE~~g~g-~--~eC~~~~-glhi~eD~~~~Ei~dP~--t---------~e-----~l~dge~GelV~T~L~~~~ 298 (438)
T COG1541 240 -DIYGLTEGFGPG-A--GECTERN-GLHIWEDHFIFEIVDPE--T---------GE-----QLPDGERGELVITTLTKEG 298 (438)
T ss_pred -eccccccccCCc-c--ccccccc-CCCcchhhceeeeecCC--c---------Cc-----cCCCCCeeEEEEEeccccC
Confidence 99999998 445 2 4575543 79999999999999886 2 23 457899999999996
Q ss_pred cceeeceeCCEEEEeceeCCC----CE-EEEEeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCC
Q 007464 399 AGLYRYRLGDVVKVMGFHNST----PE-LKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLST 473 (603)
Q Consensus 399 ~GL~RYr~GDvvrv~g~~~~~----P~-i~f~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~ 473 (603)
..|+||||||++++....|.| ++ .++.||.+||+.+.|.++++.+|+.+|.+... +.. +|.+......
T Consensus 299 ~PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~------~~~-~yqi~~~~~~ 371 (438)
T COG1541 299 MPLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPE------VTP-HYQIILTRNG 371 (438)
T ss_pred cceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccC------CCc-eEEEEEecCC
Confidence 449999999999999866644 33 48999999999999999999999999987532 211 8988776433
Q ss_pred CCceEEEEEEeccC-CCHHHHHHHHHHHHHhccChhhHHHhhcCCcCCeEEEEeccChHHHHHHHHhcCCCCCCCCCcCc
Q 007464 474 DPGHYVIFWEVSGE-VNDEVLKECCNCLDRSFVDAGYVSARKVNAIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPR 552 (603)
Q Consensus 474 ~~~hy~l~vE~~~~-~~~~~l~~~~~~ld~~L~n~~Y~~~R~~g~l~p~~v~~v~~GtF~~~~~~~~~~G~~~~Q~K~Pr 552 (603)
.-.+..+-||...+ .+.....+++..+...+ ..-...+++|.+|.+|+.++.. | |.+|
T Consensus 372 ~~d~L~V~vE~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~v~~v~~g~l~r~~------~------K~kr 430 (438)
T COG1541 372 GLDELTVRVELENEAEELEDERRLAKKLIKNI---------KSELGVRVEVELVEPGELPRTE------G------KAKR 430 (438)
T ss_pred CCceEEEEEEecCcccchHHHHHHHHHHHHHH---------HhhcCCceEEEEEeccceeccc------C------ceeE
Confidence 34567788888543 11122223333333332 3335688999999999977432 1 7778
Q ss_pred ccC
Q 007464 553 CVG 555 (603)
Q Consensus 553 ~~~ 555 (603)
++.
T Consensus 431 vvd 433 (438)
T COG1541 431 VVD 433 (438)
T ss_pred EEE
Confidence 775
No 6
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.95 E-value=3.1e-26 Score=251.78 Aligned_cols=391 Identities=14% Similarity=0.124 Sum_probs=224.6
Q ss_pred cHHHHHHHHHHHHHHH-ccCChhhHhc----CCC--CCCChhhhhhcCCCcccccchHHHHHHhcCCCCCCcc--CCCcc
Q 007464 23 DAERIQRETLRKILEE-NASAEYLQNL----GLN--GRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILT--GKPIT 93 (603)
Q Consensus 23 ~~~~~Q~~~L~~iL~~-n~~T~ygr~~----gf~--~i~s~~dF~~~vPv~~Yed~~p~ieR~~~Ge~~~lL~--~~pi~ 93 (603)
..++.|.+.|+++|++ .++++|||++ |++ .|++.+||+ ++|+++++|++..-... .+.=..++ .+.+.
T Consensus 13 ~l~~~q~~rl~~~l~~a~~~spfYr~~~~~~g~~p~~i~sl~dl~-~lP~~~k~~lr~~~p~~--~~~~~~~~~~~~~i~ 89 (445)
T TIGR03335 13 ELDALVEERIRYTVHYAAEHSPFYKKWFQENNISPSDIKSHEDLL-ELPVISGEVIRKNQPPV--TDDFMFKSADWKDIY 89 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCCHHHHHhcCCcc--ccccccccCCHHHeE
Confidence 4678999999999998 6899999985 764 789999999 69999999997653100 00001121 23355
Q ss_pred eeeccccCCCCCcccccCChHHHHHHHHHHHHHHHHHhccCCCCCCceEEEeecccccccCCCCeEeccccccccCchhh
Q 007464 94 TISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFK 173 (603)
Q Consensus 94 ~f~~TSGTT~G~~K~IP~t~~~l~~~~~~~~~~~~~~~~~~p~~~Gk~l~~~~~~~~~~t~~Gi~~g~~S~~~~~~~~f~ 173 (603)
.+..||||| |+||.+++|...+......+...+ ....+..|..+...++ .|...|. ..+
T Consensus 90 ~i~~TSGTT-G~Pk~v~~T~~dl~~~~~~~~r~~----~~~G~~~gD~vl~~~~-------~~~~~g~---~~~------ 148 (445)
T TIGR03335 90 TIHETSGTS-GTPKSFFLTWDDWKRYAEKYARSF----VSQGFTAGDRMVICAS-------YGMNVGA---NTM------ 148 (445)
T ss_pred EEEeCCCCC-CCcceeeecHHHHHHHHHHHHHHH----HHcCCCCCCeEEEEec-------CCcchhH---HHH------
Confidence 677799999 899999999877654322211110 0112333422221110 0100000 000
Q ss_pred hhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeecchhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q 007464 174 AEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV 253 (603)
Q Consensus 174 ~~~~~~~~~~~~P~e~~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~f~~~ll~~~~~l~~~w~~l~~dI~~g~~~~~i~~ 253 (603)
.+..+.++. .++.... . +..++.|++..+..
T Consensus 149 -------------------------~~~~~~~Ga------~vi~~~~---~-----------~~~~~~i~~~~~t~---- 179 (445)
T TIGR03335 149 -------------------------TLAAREVGM------SIIPEGK---C-----------TFPIRIIESYRPTG---- 179 (445)
T ss_pred -------------------------HHHHHHcCC------EEEcCCc---h-----------hHHHHHHHHhCCCE----
Confidence 000000000 0110000 0 01122233222211
Q ss_pred hHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccC
Q 007464 254 PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSS 330 (603)
Q Consensus 254 ~~~R~~l~~~l~~~p~~A~~l~~~~~~~~~~~gi~~~lWP~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaS 330 (603)
+.+.++....+|+++++. |+-.. .++++ .++.|| ....++.+++.| |++++ +.||+|
T Consensus 180 ------l~~~ps~ll~La~~~~~~--------g~~~~-~~~lr---~ii~gGE~l~~~~r~~ie~~~-g~~v~-~~YG~T 239 (445)
T TIGR03335 180 ------IVASVFKLLRLARRMKAE--------GIDPA-ESSIR---RLVVGGESFADESRNYVEELW-GCEVY-NTYGST 239 (445)
T ss_pred ------EEECHHHHHHHHHHHHHc--------CCCcc-cCcce---EEEEcCCCCCHHHHHHHHHHh-CCcEE-ecCChh
Confidence 222222223344444321 22222 34688 666666 355677888888 58999 999999
Q ss_pred cccceecCCCCCCccccceeecCCceEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEccc--------ccee
Q 007464 331 EGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV--------AGLY 402 (603)
Q Consensus 331 Eg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~--------~GL~ 402 (603)
|+.++. .|.. ..++|+..+..++|+++++ +.+ .|++|+.||||+|++ ..|+
T Consensus 240 E~~~~~----~c~~-~~g~h~~~d~~~vEIvDp~-----------~~~-----~vp~Ge~GELvvT~L~~~~~r~~~Pli 298 (445)
T TIGR03335 240 EGTMCG----ECQA-VAGLHVPEDLVHLDVYDPR-----------HQR-----FLPDGECGRIVLTTLLKPGERCGSLLI 298 (445)
T ss_pred hhhheE----EecC-CCCccccCCceEEEEEcCC-----------CCC-----CCcCCCceEEEEEecCCCCccCCceEE
Confidence 985432 3422 2479988888899999864 112 357899999999997 4499
Q ss_pred eceeCCEEEEe-ceeCCC----CEEEEEeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCC-CCCc
Q 007464 403 RYRLGDVVKVM-GFHNST----PELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLS-TDPG 476 (603)
Q Consensus 403 RYr~GDvvrv~-g~~~~~----P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~-~~~~ 476 (603)
||||||++++. ...|.| |++..+||.+||++++|.++++.+|+++|.+.... .++ -.+|.+..+.. ....
T Consensus 299 RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~---~~~-~~~~~~~~~~~~~~~~ 374 (445)
T TIGR03335 299 NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENM---DSL-TGEYEAFLYGEEEGEI 374 (445)
T ss_pred EeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCC---CCC-CccEEEEEecCCCCCc
Confidence 99999999974 345544 56777899999999999999999999999863100 011 12788776532 1122
Q ss_pred eEEEEEEeccCCCHHHHHHHHHHHHHhccChhhHHHh---hcCCcCCeEEEEeccChHHHH
Q 007464 477 HYVIFWEVSGEVNDEVLKECCNCLDRSFVDAGYVSAR---KVNAIGPLELRVVLKGTFQQI 534 (603)
Q Consensus 477 hy~l~vE~~~~~~~~~l~~~~~~ld~~L~n~~Y~~~R---~~g~l~p~~v~~v~~GtF~~~ 534 (603)
.-.+.+|...... ...+.+.+.+.+++ ...++..+ ..+ .-.++|.+|++|++++.
T Consensus 375 ~~~v~~e~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 432 (445)
T TIGR03335 375 TLRVSLECEDKDN-CSIHDIQENFTGTF-LKYKPELIGSYDEG-IFQILVNFTGPGELELH 432 (445)
T ss_pred eEEEEEEecCccc-chHHHHHHHHHHHH-hhhhhhhhhhhhcc-eEEEEEEEeCCCCcccc
Confidence 4456667643321 23334444444441 11222211 122 34578999999999743
No 7
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.93 E-value=5.4e-24 Score=231.96 Aligned_cols=380 Identities=16% Similarity=0.159 Sum_probs=218.8
Q ss_pred hcHHHHHHHHHHHHHHH-ccCChhhHhc----CC--CCCCChhhhhhcCCCcccccchHHHHHHhcCCCCCCcc--CCCc
Q 007464 22 KDAERIQRETLRKILEE-NASAEYLQNL----GL--NGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILT--GKPI 92 (603)
Q Consensus 22 ~~~~~~Q~~~L~~iL~~-n~~T~ygr~~----gf--~~i~s~~dF~~~vPv~~Yed~~p~ieR~~~Ge~~~lL~--~~pi 92 (603)
.+.++.|.+.|+++|+. .++++|||++ |+ +.|.+.+||+ ++|++++++++..... .+++ .+.+
T Consensus 6 ~~l~~~q~~~l~~~~~~a~~~~pfYr~~~~~~~i~~~~i~~~~dl~-~lP~~~K~~l~~~~~~-------~~~~~~~~~~ 77 (422)
T TIGR02155 6 DELRALQTQRLKWTVKHAYENVPHYRKAFDAAGVHPDDLQSLSDLA-KFPFTQKHDLRDNYPF-------GLFAVPREQV 77 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCcHHHHhhcCCC-------cccCCChHHc
Confidence 44678999999999998 5899999985 66 3788999998 6999999999765321 1221 2235
Q ss_pred ceeeccccCCCCCcccccCChHHHHHHHHHH-HHHHHHHhccCCCCCCceEEEeecccccccCCCCeEeccccccccCch
Q 007464 93 TTISRSSGTTQGKPKFLPFNDELMETTLQIF-RTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSST 171 (603)
Q Consensus 93 ~~f~~TSGTT~G~~K~IP~t~~~l~~~~~~~-~~~~~~~~~~~p~~~Gk~l~~~~~~~~~~t~~Gi~~g~~S~~~~~~~~ 171 (603)
..+..||||| |+||.+++|...+....... ..+.. ..+..|..+...++ .|. ..+.
T Consensus 78 ~~~~~TSGTT-G~Pk~v~~t~~~~~~~~~~~~~~~~~-----~g~~~~d~~~~~~~-------~~~----~~~~------ 134 (422)
T TIGR02155 78 VRIHASSGTT-GKPTVVGYTQNDIDTWSSVVARSIRA-----AGGRPGDLIHNAYG-------YGL----FTGG------ 134 (422)
T ss_pred EEEEECCCCC-CCCeEeccCHHHHHHHHHHHHHHHHH-----cCCCCCcEEEEccC-------ccc----cchh------
Confidence 4666899999 99999999987664332221 11111 11222322211110 000 0000
Q ss_pred hhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeecchhHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 007464 172 FKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 251 (603)
Q Consensus 172 f~~~~~~~~~~~~~P~e~~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~f~~~ll~~~~~l~~~w~~l~~dI~~g~~~~~i 251 (603)
... .|..+.++. ..+.... ..-+.+++.|++..++-
T Consensus 135 ---~~~---------------------~~~~~~~g~------~~~~~~~------------~~~~~~~~~i~~~~~t~-- 170 (422)
T TIGR02155 135 ---LGA---------------------HYGAEKLGC------TVVPISG------------GQTEKQVQLIQDFKPDI-- 170 (422)
T ss_pred ---HHH---------------------HHHHHHcCc------EEEecCC------------CCHHHHHHHHHHHCCCE--
Confidence 000 000000000 0000000 00123444555444432
Q ss_pred CchHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccc
Q 007464 252 TVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYG 328 (603)
Q Consensus 252 ~~~~~R~~l~~~l~~~p~~A~~l~~~~~~~~~~~gi~~~lWP~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~Yg 328 (603)
+.++++-...+|+++.+. |+-.+. ++++ .+++|| ....++.+++.| |++++ +.||
T Consensus 171 --------l~~~Ps~l~~L~~~~~~~--------~~~~~~-~~lr---~i~~~ge~l~~~~~~~i~~~~-g~~v~-~~YG 228 (422)
T TIGR02155 171 --------IMVTPSYMLNLLEELKRM--------GIDPAQ-TSLQ---VGIFGAEPWTNAMRKEIEARL-GMKAT-DIYG 228 (422)
T ss_pred --------EEEcHHHHHHHHHHHHHc--------CCCccc-CceE---EEEEeCCcCCHHHHHHHHHHh-CCceE-eccc
Confidence 333333333344443321 221111 3577 555555 366777888889 58998 9999
Q ss_pred cCccc-ceecCCCCCCccccceeecCCceEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEcccc----ceee
Q 007464 329 SSEGW-IGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA----GLYR 403 (603)
Q Consensus 329 aSEg~-~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~~----GL~R 403 (603)
+||+. .++. ..|.....++++..+..+.|.++++ +++ .|++|+.||||+|+.. .+.|
T Consensus 229 ~tE~~~~~~~--~~~~~~~~g~~~~~~~~~~eivd~~-----------~g~-----~v~~Ge~Gelvvt~~~~~~~p~~r 290 (422)
T TIGR02155 229 LSEVIGPGVA--MECVETQDGLHIWEDHFYPEIIDPH-----------TGE-----VLPDGEEGELVFTTLTKEALPVIR 290 (422)
T ss_pred chhhcCCcee--ecccccCCCceEecCeeEEEEECCC-----------CCC-----CCCCCCeeEEEEecCCccccceee
Confidence 99963 2222 1232122467776667788988754 122 4568999999999852 3679
Q ss_pred ceeCCEEEEeceeC--CCC-EEEEEeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEE
Q 007464 404 YRLGDVVKVMGFHN--STP-ELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVI 480 (603)
Q Consensus 404 Yr~GDvvrv~g~~~--~~P-~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~hy~l 480 (603)
|+|||+++++. .| ..| .+.|+||.+|++++.|++|++.+|+.+|.+. .++. ..|.+..+....+-..++
T Consensus 291 y~TGDl~~~~~-~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~------~~v~-~~~q~~~~~~~~~~~~~~ 362 (422)
T TIGR02155 291 YRTRDLTRLLP-GTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKM------DELS-PHYQLELTRNGHMDELTL 362 (422)
T ss_pred EEcCcEEEEEC-CCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhC------cCcC-CCEEEEEEcCCCccEEEE
Confidence 99999999875 22 223 3489999999999999999999999999753 2221 146665543222225667
Q ss_pred EEEeccCC----CHHHHHHHHHHHHHhccChhhHHHhhcCCcCCeEEEEeccChHHH
Q 007464 481 FWEVSGEV----NDEVLKECCNCLDRSFVDAGYVSARKVNAIGPLELRVVLKGTFQQ 533 (603)
Q Consensus 481 ~vE~~~~~----~~~~l~~~~~~ld~~L~n~~Y~~~R~~g~l~p~~v~~v~~GtF~~ 533 (603)
.+|...+. ..+..+.+.+.|.+.+ +...-..++|.++..|++.+
T Consensus 363 ~v~~~~~~~~~~~~~~~~~~~~~i~~~~---------~~~~~~~~~v~~~~~~~lp~ 410 (422)
T TIGR02155 363 KVELKPESYTLRLHEQASLLAGEIQHTI---------KQEVGVSMDVHLVEPGSLPR 410 (422)
T ss_pred EEEEecCcccccchHHHHHHHHHHHHHH---------HhccCcEEEEEEECCCCccC
Confidence 78875331 1122233334444443 22222236799999999863
No 8
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.89 E-value=2.9e-21 Score=210.27 Aligned_cols=315 Identities=13% Similarity=0.169 Sum_probs=204.3
Q ss_pred cHHHHHHHHHHHHHHH-ccCChhhHhcCCCCCCChhhhhhcCCCcccccchHHHHHHhcCC-CCC-------------Cc
Q 007464 23 DAERIQRETLRKILEE-NASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGD-ISP-------------IL 87 (603)
Q Consensus 23 ~~~~~Q~~~L~~iL~~-n~~T~ygr~~gf~~i~s~~dF~~~vPv~~Yed~~p~ieR~~~Ge-~~~-------------lL 87 (603)
..++.|++.|+++|+. .++++|||++. ++ +++ ++|+++++++....+++.... ..+ .+
T Consensus 23 ~l~~~Q~~rL~~ll~~a~~~sPfYr~~~--~~----~l~-~lPvl~K~~~~~~fd~~~t~~l~~~~~~~~a~~~e~~r~f 95 (430)
T TIGR02304 23 ALENWQAKQLEKFLQFVLSHSPWFQRYH--TI----PFN-QWPMMDKALMMEHFDELNTAGLKKDEALDCAMRSEKTRDF 95 (430)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhcc--CC----CHH-HCCCcCHHHHHHHHHHhhccCCChhhhhHHhhhhhhhccc
Confidence 4678999999999998 59999999973 33 566 799999999999999988421 000 01
Q ss_pred cC--CCcceeeccccCCCCCcccccCChHHHHHHHHHHHHHHHH-HhccCC--CCCC-ceEEEeecccccccCCCCeEec
Q 007464 88 TG--KPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAF-RNREFP--IGKG-KALQFIYGSKQSKTKGGLNAGT 161 (603)
Q Consensus 88 ~~--~pi~~f~~TSGTT~G~~K~IP~t~~~l~~~~~~~~~~~~~-~~~~~p--~~~G-k~l~~~~~~~~~~t~~Gi~~g~ 161 (603)
.+ +.+ ....||||| |+|-.|.++++..... ++. +.+..| +..| |...|.++..
T Consensus 96 ~~~~~~~-~v~~TSGSS-G~p~~f~~~~~~~~~~-------~a~~~~~~~~~g~~~g~r~a~~~~~~~------------ 154 (430)
T TIGR02304 96 KPCVGNI-SVGLSSGTS-GRRGLFVVSPEEQQMW-------AGGILAKVLPDGLFAKHRIAFFLRADN------------ 154 (430)
T ss_pred ccccCcE-EEEECCCCC-CCceEEEECHHHHHHH-------HHHHHhhhCccccccCCcEEEEEccCh------------
Confidence 00 233 456799999 9999999998765322 111 122222 3333 4444333321
Q ss_pred cccccccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeecchhHHHHHHHHHHHHHHHHHHH
Q 007464 162 ATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDD 241 (603)
Q Consensus 162 ~S~~~~~~~~f~~~~~~~~~~~~~P~e~~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~f~~~ll~~~~~l~~~w~~l~~d 241 (603)
..+. . .. .. ++ + +..+++. +.+++.++.
T Consensus 155 ---~ly~------~---~~----~~----------------~~---------~----------~~~~~l~-~~~~~~l~~ 182 (430)
T TIGR02304 155 ---NLYQ------S---VN----NR----------------WI---------S----------LDFFDLL-APFQAHIKR 182 (430)
T ss_pred ---hHHH------H---HH----hc----------------cc---------e----------eeecCCC-cCHHHHHHH
Confidence 0000 0 00 00 00 0 1112233 567788888
Q ss_pred HHhcccCCCCCchHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecC---hHHHHHHHHHHhC
Q 007464 242 IREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS---MEHYLKKLRHYAG 318 (603)
Q Consensus 242 I~~g~~~~~i~~~~~R~~l~~~l~~~p~~A~~l~~~~~~~~~~~gi~~~lWP~L~~i~~~~~G~---~~~y~~~l~~~~g 318 (603)
|.+-.+. .|.++++....+|+++++. |+ ++ +++ .++++| ....++.+++.|
T Consensus 183 L~~~~P~----------~L~g~pS~l~~LA~~~~~~--------~l--~~--~~k---~ii~~~E~l~~~~r~~Ie~~f- 236 (430)
T TIGR02304 183 LNQRKPS----------IIVAPPSVLRALALEVMEG--------EL--TI--KPK---KVISVAEVLEPQDRELIRNVF- 236 (430)
T ss_pred HHHhCCC----------EEEEcHHHHHHHHHHHHhc--------CC--CC--Cce---EEEEccCCCCHHHHHHHHHHh-
Confidence 8777663 3667766667777766532 23 22 456 455554 466777899999
Q ss_pred CCCeeccccccCcccceecCCCCCCccccceeecCCceEEEE--EeCCCCCcccccccCCCccccccccCCCCeEEEEEc
Q 007464 319 DLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF--IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT 396 (603)
Q Consensus 319 g~~i~~~~YgaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EF--ip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvT 396 (603)
|++++ +.||+|||+++ .+|+. .+||+.++..++|+ ++++ | .++.|||
T Consensus 237 g~~V~-~~YG~tEg~la----~eC~~--g~lHl~ed~~~vE~~ivD~~-----------------------~-~~~~ViT 285 (430)
T TIGR02304 237 KNTVH-QIYQATEGFLA----STCRC--GTLHLNEDLVHIEKQYLDEH-----------------------K-RFVPIIT 285 (430)
T ss_pred CCCee-EccCCchhheE----EecCC--CCEEEccccEEEEeeEECCC-----------------------C-ceEEEEe
Confidence 59999 89999998766 34543 46999999999994 4332 1 2345999
Q ss_pred cc----cceeeceeCCEEEEeceeCCC----CEE-EEEeecCceEee---eeee--cCHHHHHHHHHHHHHHhhhcCCee
Q 007464 397 NV----AGLYRYRLGDVVKVMGFHNST----PEL-KFICRRNLLLTI---NIDK--NTEKDLQLSVDEAAQLLAEEKQEV 462 (603)
Q Consensus 397 t~----~GL~RYr~GDvvrv~g~~~~~----P~i-~f~gR~~~~i~v---~Gek--v~e~~v~~av~~a~~~l~~~g~~l 462 (603)
++ ..|+||+|||++++.+..|.| |+| ++.||.+|++.+ +|.. +++..+..+|....+ + +
T Consensus 286 ~L~n~~~PlIRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~-----~--i 358 (430)
T TIGR02304 286 DFTRTTQPIVRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLP-----L--I 358 (430)
T ss_pred cCCCccceEEeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCC-----C--C
Confidence 97 459999999999988776644 466 589999999976 3444 588888887664322 2 4
Q ss_pred EeeEEeecCCCCCceEEEEEEe
Q 007464 463 VDFTSHVDLSTDPGHYVIFWEV 484 (603)
Q Consensus 463 ~~f~~~~~~~~~~~hy~l~vE~ 484 (603)
.+|.++.. ...+..+.++.
T Consensus 359 ~~yQi~Q~---~~~~l~v~~~~ 377 (430)
T TIGR02304 359 VEYRVLQT---GSAQLELIADC 377 (430)
T ss_pred ceEEEEEc---cCCeEEEEEEe
Confidence 68988765 35677766654
No 9
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.53 E-value=2.6e-14 Score=148.76 Aligned_cols=130 Identities=19% Similarity=0.215 Sum_probs=97.4
Q ss_pred CCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCc----cccceeecCCceEEEEEeCCCC
Q 007464 294 NAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPP----ELATFAVLPNIGYFEFIPQRLG 366 (603)
Q Consensus 294 ~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~~~----~~~~~~l~~~~~~~EFip~~~~ 366 (603)
+|+++. -|| .+...+++...+ |+.+. ..+|+.||.+.+.--. .|+ ...|..+.|+. |..-++
T Consensus 306 SLrllQ---VGGarl~~~~Arrv~~~l-gC~LQ-QVFGMAEGLvnyTRLD-Dp~E~i~~TQGrPlsP~D---EvrvvD-- 374 (542)
T COG1021 306 SLRLLQ---VGGARLSATLARRVPAVL-GCQLQ-QVFGMAEGLVNYTRLD-DPPEIIIHTQGRPLSPDD---EVRVVD-- 374 (542)
T ss_pred heeEEe---ecCcccCHHHHhhchhhh-CchHH-HHhhhhhhhhcccccC-CchHheeecCCCcCCCcc---eeEEec--
Confidence 577544 444 366777888888 69999 9999999987654211 112 12344444432 444444
Q ss_pred CcccccccCCCccccccccCCCCeEEEEE---ccccceee--------------ceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIV---TNVAGLYR--------------YRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G~~yELVv---Tt~~GL~R--------------Yr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
+++ .+|.+||+|+|.+ -|+.|||| ||+||+|+.+. ...+.+.||.|
T Consensus 375 ~dg-------------~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~----dGyl~V~GR~K 437 (542)
T COG1021 375 ADG-------------NPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDP----DGYLVVEGRVK 437 (542)
T ss_pred CCC-------------CCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecC----CceEEEEeeeh
Confidence 222 2678999999998 45899997 99999999995 78999999999
Q ss_pred ceEeeeeeecCHHHHHHHHHHH
Q 007464 430 LLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 430 ~~i~v~Gekv~e~~v~~av~~a 451 (603)
|.||.+||||..+|||+.+...
T Consensus 438 DQINRgGEKIAAeEvEn~LL~H 459 (542)
T COG1021 438 DQINRGGEKIAAEEVENLLLRH 459 (542)
T ss_pred hhhccccchhhHHHHHHHHhhC
Confidence 9999999999999999988764
No 10
>PRK07529 AMP-binding domain protein; Validated
Probab=99.52 E-value=1.7e-12 Score=148.94 Aligned_cols=136 Identities=12% Similarity=0.150 Sum_probs=95.3
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CccccceeecCCceEEEEEeCCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
+++++ .+++||. ....+++++.+ +++++ +.||+||+.......+.. ..+..|..+ |+ .-+.++..+
T Consensus 332 ~~slr---~v~~gg~~l~~~l~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~~svG~~~-p~-~~v~i~~~d- 403 (632)
T PRK07529 332 ISSLR---YALCGAAPLPVEVFRRFEAAT-GVRIV-EGYGLTEATCVSSVNPPDGERRIGSVGLRL-PY-QRVRVVILD- 403 (632)
T ss_pred ccceE---EEEEcCCCCCHHHHHHHHHHh-CCcEe-eeecccccCcccccCCccccccCCCccccc-CC-ceEEEEEcC-
Confidence 46788 6677763 55666777777 68999 999999986544332211 122234432 32 234555444
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
++ +. ...++.+|+.|||+|++ +.||+ +|+|||+++++. ...+.|+||.+
T Consensus 404 -~~--------g~--~~~~~~~g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~----dG~l~i~GR~~ 468 (632)
T PRK07529 404 -DA--------GR--YLRDCAVDEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDA----DGYFWLTGRAK 468 (632)
T ss_pred -CC--------Cc--ccccCCCCCceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcC----CceEEEEeccc
Confidence 21 11 11356789999999976 45543 699999999985 67999999999
Q ss_pred ceEeeeeeecCHHHHHHHHHH
Q 007464 430 LLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 430 ~~i~v~Gekv~e~~v~~av~~ 450 (603)
|+|+++|++|++.+||++|.+
T Consensus 469 d~i~~~G~~i~p~eIE~~l~~ 489 (632)
T PRK07529 469 DLIIRGGHNIDPAAIEEALLR 489 (632)
T ss_pred CEEEeCCEEECHHHHHHHHHh
Confidence 999999999999999999975
No 11
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.51 E-value=1.2e-12 Score=147.19 Aligned_cols=134 Identities=16% Similarity=0.180 Sum_probs=92.9
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CccccceeecCCceEEEEEeCCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
.++|+ .+++||. ....+++++.+++++++ +.||+||+...+...+.. ..+..|..+ ++ +|+.-.+
T Consensus 298 ~~~lr---~i~~gG~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~-~g---~~v~i~d- 368 (539)
T PRK06334 298 LPSLR---FVVIGGDAFKDSLYQEALKTFPHIQLR-QGYGTTECSPVITINTVNSPKHESCVGMPI-RG---MDVLIVS- 368 (539)
T ss_pred ccccc---EEEECCccCCHHHHHHHHHHCCCCeEE-ecccccccCceEEeccCCCCCCCCcCceec-CC---CEEEEEc-
Confidence 46788 6777773 55667777788778899 999999975433222111 111233322 22 2332222
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee---------------eceeCCEEEEeceeCCCCEEEEEee
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------RYRLGDVVKVMGFHNSTPELKFICR 427 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~---------------RYr~GDvvrv~g~~~~~P~i~f~gR 427 (603)
++ ++ .+|++|+.|||+|.+ +.||| +|+|||+++++. ...+.|+||
T Consensus 369 -~~-------~~-----~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~----~G~l~~~GR 431 (539)
T PRK06334 369 -EE-------TK-----VPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDR----HGELFLKGR 431 (539)
T ss_pred -CC-------CC-----ccCCCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECC----CCeEEEEec
Confidence 11 11 246789999999966 34554 699999999985 678999999
Q ss_pred cCceEeeeeeecCHHHHHHHHHHH
Q 007464 428 RNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 428 ~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
.+|+|+++|++|++.|||++|.+.
T Consensus 432 ~~d~ik~~G~~v~p~eIE~~l~~~ 455 (539)
T PRK06334 432 LSRFVKIGAEMVSLEALESILMEG 455 (539)
T ss_pred cCCeEEECCEEECHHHHHHHHHHc
Confidence 999999999999999999999864
No 12
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.49 E-value=1.5e-11 Score=141.08 Aligned_cols=230 Identities=14% Similarity=0.118 Sum_probs=130.8
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCC--CCeeccccccCcccceecC-CC---CCCccccceeecCCceEEEEEe
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGD--LPLMSADYGSSEGWIGANV-NP---SLPPELATFAVLPNIGYFEFIP 362 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg--~~i~~~~YgaSEg~~~i~~-~~---~~~~~~~~~~l~~~~~~~EFip 362 (603)
.++|+ .+.+||. ......+.+.+++ ++++ +.||+||+...+.. .+ .+.++..+.. .| +.-++.++
T Consensus 366 ~~~lr---~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p-~~-g~~~~i~d 439 (637)
T PRK00174 366 LSSLR---LLGSVGEPINPEAWEWYYKVVGGERCPIV-DTWWQTETGGIMITPLPGATPLKPGSATRP-LP-GIQPAVVD 439 (637)
T ss_pred cccee---EEEEeCCCCCHHHHHHHHHHhCCCCCceE-ecccccccCCceEecCCCCCCcCCCcccCC-CC-CceEEEEC
Confidence 35788 5666663 4445556666653 7899 99999997432211 11 1112223332 22 23344443
Q ss_pred CCCCCcccccccCCCccccccccCCCCeEEEEEccc-----ccee----------------eceeCCEEEEeceeCCCCE
Q 007464 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV-----AGLY----------------RYRLGDVVKVMGFHNSTPE 421 (603)
Q Consensus 363 ~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~-----~GL~----------------RYr~GDvvrv~g~~~~~P~ 421 (603)
.+ ++ +++.|+.|||+|+.. .|+| +|+|||+++++. ...
T Consensus 440 ~~------------g~-----~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~ 498 (637)
T PRK00174 440 EE------------GN-----PLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDE----DGY 498 (637)
T ss_pred CC------------CC-----CCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcC----CCc
Confidence 22 22 356799999999851 2332 499999999984 678
Q ss_pred EEEEeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeec-CCCCCceEEEEEEeccCC--CHHHHHHHHH
Q 007464 422 LKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD-LSTDPGHYVIFWEVSGEV--NDEVLKECCN 498 (603)
Q Consensus 422 i~f~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~-~~~~~~hy~l~vE~~~~~--~~~~l~~~~~ 498 (603)
+.|+||.+|+|+++|++|++.+||++|.+. .+ +.+..++.. .......-+.|+++..+. +.+..+++.+
T Consensus 499 l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~------~~--V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~ 570 (637)
T PRK00174 499 YWITGRVDDVLNVSGHRLGTAEIESALVAH------PK--VAEAAVVGRPDDIKGQGIYAFVTLKGGEEPSDELRKELRN 570 (637)
T ss_pred EEEEEecccEEEeCCEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999753 23 334444321 111112334566664332 2222334444
Q ss_pred HHHHhccChhhHHHhhcCCcCCeEEEEe------ccChHHHHHHHHhcCCCCCCCCCcCcccCCCCHHHHHHHhcccc
Q 007464 499 CLDRSFVDAGYVSARKVNAIGPLELRVV------LKGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCNNIG 570 (603)
Q Consensus 499 ~ld~~L~n~~Y~~~R~~g~l~p~~v~~v------~~GtF~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~~~~ 570 (603)
.+.+.| +. ...|-.+.+| ..|-..+-.=..+.+|.. +.+-+.-+. |++.++.+.+.+-
T Consensus 571 ~l~~~l--~~--------~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~ 634 (637)
T PRK00174 571 WVRKEI--GP--------IAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGEE--ILGDTSTLA--DPSVVEKLIEARQ 634 (637)
T ss_pred HHHhhc--CC--------ccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCCC--CCCCccccc--CHHHHHHHHHHHh
Confidence 444443 11 2345555555 344444321111223432 344455566 8889888876543
No 13
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.49 E-value=2e-11 Score=139.75 Aligned_cols=228 Identities=13% Similarity=0.098 Sum_probs=128.8
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhC--CCCeeccccccCcccce-ecCCC---CCCccccceeecCCceEEEEEe
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAG--DLPLMSADYGSSEGWIG-ANVNP---SLPPELATFAVLPNIGYFEFIP 362 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~g--g~~i~~~~YgaSEg~~~-i~~~~---~~~~~~~~~~l~~~~~~~EFip 362 (603)
.++|+ .+.+||. ....+.+.+.++ +++++ +.||+||+... +...+ ...++..+.. .| +.-++.++
T Consensus 357 l~~lr---~i~~~G~~l~~~~~~~~~~~~~~~~~~i~-~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p-~~-g~~~~i~d 430 (625)
T TIGR02188 357 LSSLR---LLGSVGEPINPEAWMWYYKVVGKERCPIV-DTWWQTETGGIMITPLPGATPTKPGSATLP-FF-GIEPAVVD 430 (625)
T ss_pred cccee---EEEEecCCCCHHHHHHHHHHcCCCCCceE-ecccccccCCceeecCCCCCCcCCCcccCC-cC-CceEEEEC
Confidence 35677 6666663 444455666665 38899 99999997432 21111 1112223332 22 22344443
Q ss_pred CCCCCcccccccCCCccccccccC-CCCeEEEEEcc-----cccee----------------eceeCCEEEEeceeCCCC
Q 007464 363 QRLGNLESQVLCIEPKPVGLTEVK-VGEEYEIIVTN-----VAGLY----------------RYRLGDVVKVMGFHNSTP 420 (603)
Q Consensus 363 ~~~~~~~~~~~~~~~~~v~l~eve-~G~~yELVvTt-----~~GL~----------------RYr~GDvvrv~g~~~~~P 420 (603)
.+ ++ .++ +|+.|||+|+. ..|+| +|+|||+++++. ..
T Consensus 431 ~~------------g~-----~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG 489 (625)
T TIGR02188 431 EE------------GN-----PVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDK----DG 489 (625)
T ss_pred CC------------CC-----CCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcC----CC
Confidence 21 22 345 79999999986 23343 399999999985 57
Q ss_pred EEEEEeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeec-CCCCCceEEEEEEeccC--CCHHHHHHHH
Q 007464 421 ELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD-LSTDPGHYVIFWEVSGE--VNDEVLKECC 497 (603)
Q Consensus 421 ~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~-~~~~~~hy~l~vE~~~~--~~~~~l~~~~ 497 (603)
.+.|+||.+|+|+++|++|++.+||++|.+. .+ |.+..++.. .......-+.||.+..+ .+.+..+++.
T Consensus 490 ~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~------p~--V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~ 561 (625)
T TIGR02188 490 YIWITGRVDDVINVSGHRLGTAEIESALVSH------PA--VAEAAVVGIPDDIKGQAIYAFVTLKDGYEPDDELRKELR 561 (625)
T ss_pred cEEEEecccCEEEeCCEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCeEEEEEEEeCCCCCCCHHHHHHHH
Confidence 8999999999999999999999999999853 22 345544321 11111233466766543 2222233444
Q ss_pred HHHHHhccChhhHHHhhcCCcCCeEEEEec------cChHHHHHHHHhcCCCCCCCCCcCcccCCCCHHHHHHHhc
Q 007464 498 NCLDRSFVDAGYVSARKVNAIGPLELRVVL------KGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCN 567 (603)
Q Consensus 498 ~~ld~~L~n~~Y~~~R~~g~l~p~~v~~v~------~GtF~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~ 567 (603)
+.+.+.| . . ...|-.|.+|. .|-..+-.=..+..|.. .+++.+.-+. |++.++.+++
T Consensus 562 ~~~~~~l-~-~--------~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~-~~~~~~~~~~--~p~~~~~~~~ 624 (625)
T TIGR02188 562 KHVRKEI-G-P--------IAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGEE-EILGDTSTLE--DPSVVEELIE 624 (625)
T ss_pred HHHHhhc-C-C--------CccCcEEEECCCCCCCCCccchHHHHHHHHcCCC-CCCCCccccc--CHHHHHHHHh
Confidence 4444443 1 1 23344444442 34433322112223431 2345556666 8888888765
No 14
>PRK09274 peptide synthase; Provisional
Probab=99.49 E-value=7.1e-12 Score=140.87 Aligned_cols=142 Identities=13% Similarity=0.135 Sum_probs=92.9
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhC-CCCeeccccccCcccceecCCCC-----------C-CccccceeecCCc
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAG-DLPLMSADYGSSEGWIGANVNPS-----------L-PPELATFAVLPNI 355 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~g-g~~i~~~~YgaSEg~~~i~~~~~-----------~-~~~~~~~~l~~~~ 355 (603)
.|+++ .+.+||. ...++++++.++ |++++ +.||+||+......... . +....|.. .|+
T Consensus 287 ~~~lr---~~~~gG~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~-~~~- 360 (552)
T PRK09274 287 LPSLR---RVISAGAPVPIAVIERFRAMLPPDAEIL-TPYGATEALPISSIESREILFATRAATDNGAGICVGRP-VDG- 360 (552)
T ss_pred Cchhh---EEEecCCcCCHHHHHHHHHHcCCCceEE-ccccccccceeEeecchhhhccccccccCCCCcccCcc-CCC-
Confidence 46788 6677763 566777888886 47898 99999997532211110 0 00012222 232
Q ss_pred eEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---ccce------------------eeceeCCEEEEec
Q 007464 356 GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGL------------------YRYRLGDVVKVMG 414 (603)
Q Consensus 356 ~~~EFip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL------------------~RYr~GDvvrv~g 414 (603)
.-+.+++.. +.. .+..-...+++.|+.|||+|++ +.|| .||+|||+++++.
T Consensus 361 ~~~~ivd~~--~~~------~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~ 432 (552)
T PRK09274 361 VEVRIIAIS--DAP------IPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDA 432 (552)
T ss_pred ceEEEEecc--ccc------cccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEcc
Confidence 334455532 100 0000011356789999999954 2333 3899999999985
Q ss_pred eeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 415 FHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 415 ~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
...+.|+||.+|+|+++|++|++.+||++|.+.
T Consensus 433 ----dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~ 465 (552)
T PRK09274 433 ----QGRLWFCGRKAHRVETAGGTLYTIPCERIFNTH 465 (552)
T ss_pred ----CCcEEEEeccCCeEEECCEEECcHHHHHHHHhC
Confidence 678999999999999999999999999999864
No 15
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.44 E-value=1.4e-11 Score=138.38 Aligned_cols=132 Identities=16% Similarity=0.046 Sum_probs=91.0
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCccccceeecCCceEEEEEeCCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~---~~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
.++|+ .++.||. ....+++++.+ +++++ +.||+||+.+.....+. ..++..|.. .+ +.-+++++.+
T Consensus 322 ~~~lr---~i~~gG~~l~~~~~~~~~~~~-~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~~-~~-~~~~~i~d~~- 393 (549)
T PRK07788 322 TSSLK---IIFVSGSALSPELATRALEAF-GPVLY-NLYGSTEVAFATIATPEDLAEAPGTVGRP-PK-GVTVKILDEN- 393 (549)
T ss_pred CCcee---EEEEeCCCCCHHHHHHHHHHh-Cccce-eccCcchhchhhccChhhhhhcCCCcccC-CC-CcEEEEECCC-
Confidence 46788 6666663 55666777777 46888 99999997432211111 111222332 22 2334554432
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee----------eceeCCEEEEeceeCCCCEEEEEeecCceE
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY----------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 432 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~----------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i 432 (603)
++ +++.|+.|||+|++ +.||+ +|+|||+++.+. ...+.|+||.+|++
T Consensus 394 -----------~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd~i 453 (549)
T PRK07788 394 -----------GN-----EVPRGVVGRIFVGNGFPFEGYTDGRDKQIIDGLLSSGDVGYFDE----DGLLFVDGRDDDMI 453 (549)
T ss_pred -----------cC-----CCCCCCeEEEEEeCCCccccccCCCcccccCCceecCceEEEcC----CCCEEEeccCcceE
Confidence 12 45679999999987 35555 589999999885 67899999999999
Q ss_pred eeeeeecCHHHHHHHHHHH
Q 007464 433 TINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 433 ~v~Gekv~e~~v~~av~~a 451 (603)
+++|++|++.+||+++.+.
T Consensus 454 ~~~G~~v~p~eIE~~l~~~ 472 (549)
T PRK07788 454 VSGGENVFPAEVEDLLAGH 472 (549)
T ss_pred EECCEEECHHHHHHHHHhC
Confidence 9999999999999999753
No 16
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.44 E-value=2.2e-11 Score=140.35 Aligned_cols=132 Identities=17% Similarity=0.137 Sum_probs=90.3
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCccccceeecCCceEEEEEeCCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~---~~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
.++|+ .+.+||. ....+.+++.+ |+++. +.||+||+...+..... .+.+..|.. .| +.-.+.++.+
T Consensus 379 l~~Lr---~i~~~G~~l~~~~~~~~~~~~-g~~i~-~~yG~TE~~~~~~~~~~~~~~~~~s~G~p-~~-g~~~~i~d~~- 450 (647)
T PTZ00237 379 LSNLK---EIWCGGEVIEESIPEYIENKL-KIKSS-RGYGQTEIGITYLYCYGHINIPYNATGVP-SI-FIKPSILSED- 450 (647)
T ss_pred cchhe---EEEecCccCCHHHHHHHHHhc-CCCEE-eeechHHhChhhhccCCCCCCCCCCCccC-cC-CceEEEECCC-
Confidence 35788 6666763 44555666767 58998 99999997533221111 111223332 12 2234444321
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc------cccee---------------eceeCCEEEEeceeCCCCEEEE
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN------VAGLY---------------RYRLGDVVKVMGFHNSTPELKF 424 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt------~~GL~---------------RYr~GDvvrv~g~~~~~P~i~f 424 (603)
++ +|+.|+.|||+++. ..||| +|+|||+++++. ...+.|
T Consensus 451 -----------g~-----~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~----dG~l~i 510 (647)
T PTZ00237 451 -----------GK-----ELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDE----NGYYTI 510 (647)
T ss_pred -----------CC-----CCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECC----CCeEEE
Confidence 22 45679999999974 35666 499999999985 689999
Q ss_pred EeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 425 ICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 425 ~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
+||.+|+|+++|++|++.|||++|.+.
T Consensus 511 ~GR~dd~i~~~G~rI~p~eIE~~l~~~ 537 (647)
T PTZ00237 511 VSRSDDQIKISGNKVQLNTIETSILKH 537 (647)
T ss_pred EeccCCEEEECCEEeCHHHHHHHHHhC
Confidence 999999999999999999999999853
No 17
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.43 E-value=2.3e-11 Score=136.82 Aligned_cols=158 Identities=8% Similarity=0.074 Sum_probs=101.9
Q ss_pred CCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCCC----ccccceeecCCceEEEEEeCC
Q 007464 292 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP----PELATFAVLPNIGYFEFIPQR 364 (603)
Q Consensus 292 WP~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~~----~~~~~~~l~~~~~~~EFip~~ 364 (603)
.|+++ .+++|| .....+++++.+ +++++ +.||+||+.......+..+ ....|.. .+ +.-++.++.+
T Consensus 311 ~~~l~---~~~~~G~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~-~~-~~~v~i~d~~ 383 (547)
T PRK13295 311 VSSLR---TFLCAGAPIPGALVERARAAL-GAKIV-SAWGMTENGAVTLTKLDDPDERASTTDGCP-LP-GVEVRVVDAD 383 (547)
T ss_pred cccce---EEEEecCCCCHHHHHHHHHHh-CCCeE-EeccCCCCCCeeeccCCCcchhccCccccc-cC-CcEEEEECCC
Confidence 56788 666666 356667777777 68999 9999999744222111110 0112222 12 2234444322
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEcc---cccee------------eceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 365 ~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~------------RYr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
+ .++..|+.|||+|++ +.||| +|+|||+++++. .+.+.|.||.+
T Consensus 384 ------------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~~TGD~~~~~~----~g~l~~~gR~~ 442 (547)
T PRK13295 384 ------------G-----APLPAGQIGRLQVRGCSNFGGYLKRPQLNGTDADGWFDTGDLARIDA----DGYIRISGRSK 442 (547)
T ss_pred ------------C-----CCCCCCCCCeEEEEcCcccccccCCccccccCCCCCeecceEEEEcC----CceEEEEeccC
Confidence 1 245679999999977 36665 499999999975 67899999999
Q ss_pred ceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCC-CCceEEEEEEec
Q 007464 430 LLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLST-DPGHYVIFWEVS 485 (603)
Q Consensus 430 ~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~-~~~hy~l~vE~~ 485 (603)
++++++|++|++.+|+++|.+. .+ +.+..+...... ....-+.+++..
T Consensus 443 ~~i~~~G~~v~p~~IE~~l~~~------~~--v~~~~v~~~~~~~~g~~~~~~v~~~ 491 (547)
T PRK13295 443 DVIIRGGENIPVVEIEALLYRH------PA--IAQVAIVAYPDERLGERACAFVVPR 491 (547)
T ss_pred CeEEECCEEECHHHHHHHHHhC------CC--eeeEEEEeeecCCCCcEEEEEEEeC
Confidence 9999999999999999998753 22 345555432111 112445666654
No 18
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.43 E-value=3.1e-11 Score=136.54 Aligned_cols=132 Identities=12% Similarity=0.110 Sum_probs=91.6
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCC--CCCccccceeecCCceEEEEEeCCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNP--SLPPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~-~i~~~~--~~~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
+++++ .+++||. ......+++.+ +++++ +.||+||+.. .+...+ ...++..|.. .| +..+++++.+
T Consensus 322 ~~~lr---~~~~gG~~l~~~~~~~~~~~~-g~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p-~~-g~~~~i~d~~- 393 (570)
T PRK04319 322 LSSLR---HILSVGEPLNPEVVRWGMKVF-GLPIH-DNWWMTETGGIMIANYPAMDIKPGSMGKP-LP-GIEAAIVDDQ- 393 (570)
T ss_pred cccce---EEEEcccCCCHHHHHHHHHHh-CCCeE-eceeecccCCEEEecCCCCCCCCCcCcCC-CC-CCEEEEECCC-
Confidence 56788 6666663 44556666767 58898 9999999743 221111 1112223432 22 3345555432
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc-----cccee-------------eceeCCEEEEeceeCCCCEEEEEee
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN-----VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICR 427 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt-----~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR 427 (603)
+ . ++++|+.|||+|+. +.||| +|+|||+++++. ...+.|+||
T Consensus 394 ---~--------~-----~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~----~g~l~~~GR 453 (570)
T PRK04319 394 ---G--------N-----ELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDE----DGYFWFQGR 453 (570)
T ss_pred ---C--------C-----CCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECC----CeeEEEEec
Confidence 1 1 45789999999974 24666 699999999985 678999999
Q ss_pred cCceEeeeeeecCHHHHHHHHHHH
Q 007464 428 RNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 428 ~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
.+|+++++|++|++.+||+++.+.
T Consensus 454 ~~d~i~~~G~~i~p~eIE~~l~~~ 477 (570)
T PRK04319 454 VDDVIKTSGERVGPFEVESKLMEH 477 (570)
T ss_pred CCCEEEECCEEECHHHHHHHHhhC
Confidence 999999999999999999999764
No 19
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.43 E-value=1.9e-11 Score=138.12 Aligned_cols=133 Identities=13% Similarity=0.119 Sum_probs=93.2
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceec--CCCCC--CccccceeecCCceEEEEEeCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGAN--VNPSL--PPELATFAVLPNIGYFEFIPQR 364 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~--~~~~~--~~~~~~~~l~~~~~~~EFip~~ 364 (603)
++.++ .+..||. ...++++.+.+++++++ +.||+||+..... ..... ..+..+. ...+.-.+.++++
T Consensus 318 ~~~lr---~~~~gg~~l~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~vG~--~~~~~~v~i~d~~ 391 (560)
T PLN02574 318 LKSLK---QVSCGAAPLSGKFIQDFVQTLPHVDFI-QGYGMTESTAVGTRGFNTEKLSKYSSVGL--LAPNMQAKVVDWS 391 (560)
T ss_pred cccce---EEEEecccCCHHHHHHHHHHCCCCcEE-ecccccccCceeecCCCccccCCCCceee--eCCCcEEEEEeCC
Confidence 45677 5666663 45566677777778999 9999999753221 11111 1122232 2234456666543
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEee
Q 007464 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 427 (603)
Q Consensus 365 ~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR 427 (603)
+++ +++.|+.|||+|++ +.||| +|+|||+++++. ...+.|+||
T Consensus 392 -----------~g~-----~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR 451 (560)
T PLN02574 392 -----------TGC-----LLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDE----DGYLYIVDR 451 (560)
T ss_pred -----------CCc-----CCCCCCCeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEEC----CCeEEEEec
Confidence 122 45789999999976 35554 499999999985 678999999
Q ss_pred cCceEeeeeeecCHHHHHHHHHH
Q 007464 428 RNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 428 ~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
.+|+++++|++|+..+||++|.+
T Consensus 452 ~~d~i~~~G~~v~~~eiE~~l~~ 474 (560)
T PLN02574 452 LKEIIKYKGFQIAPADLEAVLIS 474 (560)
T ss_pred chhheEECCEEECHHHHHHHHHh
Confidence 99999999999999999999875
No 20
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.43 E-value=6.9e-11 Score=133.47 Aligned_cols=131 Identities=18% Similarity=0.262 Sum_probs=92.3
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC--CccccceeecCCceEEEEEeCCCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL--PPELATFAVLPNIGYFEFIPQRLG 366 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~--~~~~~~~~l~~~~~~~EFip~~~~ 366 (603)
.++++ +++.||. ....+++++.+ +++++ +.||+||+...+...+.. .++..|.. .| +..++.++.+
T Consensus 325 ~~~lr---~v~~gG~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~vG~~-~~-~~~v~i~d~~-- 395 (562)
T PRK05677 325 FSALK---LTLSGGMALQLATAERWKEVT-GCAIC-EGYGMTETSPVVSVNPSQAIQVGTIGIP-VP-STLCKVIDDD-- 395 (562)
T ss_pred hhhce---EEEEcCccCCHHHHHHHHHHc-CCCee-ccCCccccCcceeecCccCCCCCccCcc-CC-CCEEEEECCC--
Confidence 45678 6677773 55556677767 58999 999999975433222211 12223432 23 3345555432
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
.. +|..|+.|||+|++ ..||| +|+|||+++++. ...+.|.||.+
T Consensus 396 ----------~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR~~ 456 (562)
T PRK05677 396 ----------GN-----ELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQE----DGYMRIVDRKK 456 (562)
T ss_pred ----------CC-----CCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECC----CCcEEEEecCc
Confidence 12 45789999999976 35555 499999999985 57899999999
Q ss_pred ceEeeeeeecCHHHHHHHHHH
Q 007464 430 LLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 430 ~~i~v~Gekv~e~~v~~av~~ 450 (603)
|++++.|++|++.+||++|.+
T Consensus 457 d~i~~~G~~i~p~eiE~~l~~ 477 (562)
T PRK05677 457 DMILVSGFNVYPNELEDVLAA 477 (562)
T ss_pred CeEEeCCEEECHHHHHHHHHh
Confidence 999999999999999999975
No 21
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.42 E-value=6.9e-11 Score=130.84 Aligned_cols=133 Identities=17% Similarity=0.261 Sum_probs=88.7
Q ss_pred cCCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCC-------CCCccccceeecCCceEEEE
Q 007464 291 LFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP-------SLPPELATFAVLPNIGYFEF 360 (603)
Q Consensus 291 lWP~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~-------~~~~~~~~~~l~~~~~~~EF 360 (603)
-+|+++ .+..|| .....+.+.+.+++++++ +.||+||+...+.... .++....+.. .|+ .-...
T Consensus 256 ~~~~l~---~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~-~~~-~~~~i 329 (502)
T TIGR01734 256 NYPHLT---HFLFCGEELPVKTAKALLERFPKATIY-NTYGPTEATVAVTSVKITQEILDQYPRLPIGFA-KPD-MNLFI 329 (502)
T ss_pred cCCccc---EEEEcCCcCCHHHHHHHHHHCCCcEEE-eCccCCcceEEEEEEEccccccccCCccccccc-cCC-CEEEE
Confidence 357777 555555 255666677778788998 9999999743332110 0111112221 122 11222
Q ss_pred EeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee-----------------eceeCCEEEEeceeCCCC
Q 007464 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------------RYRLGDVVKVMGFHNSTP 420 (603)
Q Consensus 361 ip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-----------------RYr~GDvvrv~g~~~~~P 420 (603)
++.+ +. .+.+|+.|||+|++ ..|+| +|+|||+++++. .
T Consensus 330 ~~~~------------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~----~- 387 (502)
T TIGR01734 330 MDEE------------GE-----PLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITD----G- 387 (502)
T ss_pred ECCC------------CC-----CCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEEC----C-
Confidence 2211 12 45679999999976 34444 799999999985 4
Q ss_pred EEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 421 ELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 421 ~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
.+.|+||.+|+++++|+||++.+||+++.+.
T Consensus 388 ~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~ 418 (502)
T TIGR01734 388 QLFYQGRLDFQIKLHGYRIELEDIEFNLRQS 418 (502)
T ss_pred EEEEeccccCeEEECcEEeCHHHHHHHHHcC
Confidence 9999999999999999999999999999864
No 22
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.41 E-value=7.5e-11 Score=132.75 Aligned_cols=131 Identities=15% Similarity=0.125 Sum_probs=90.4
Q ss_pred CCCceeeEEeecCh-HHHHHHHHHHhCCCCeeccccccCcccceecCC-CCCCccccceeecCCceEEEEEeCCCCCccc
Q 007464 293 PNAKYLSGIMTGSM-EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PSLPPELATFAVLPNIGYFEFIPQRLGNLES 370 (603)
Q Consensus 293 P~L~~i~~~~~G~~-~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~-~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~ 370 (603)
++++ .+.+|+. ...++.+++.+ +++++ +.||+||+...+... +...++..+.. ..+.-+++++.+
T Consensus 294 ~~l~---~~~~g~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~vG~~--~~~~~~~i~d~~------ 360 (542)
T PRK06155 294 HRVR---VALGPGVPAALHAAFRERF-GVDLL-DGYGSTETNFVIAVTHGSQRPGSMGRL--APGFEARVVDEH------ 360 (542)
T ss_pred CceE---EEEEcCCCHHHHHHHHHHc-CCCEE-eeecccccCccccCCCCCCCCCCcCcc--CCCceEEEECCC------
Confidence 4566 4445653 44556677777 58999 999999975433221 12222223322 233445555422
Q ss_pred ccccCCCccccccccCCCCeEEEEEccc------ccee-------------eceeCCEEEEeceeCCCCEEEEEeecCce
Q 007464 371 QVLCIEPKPVGLTEVKVGEEYEIIVTNV------AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLL 431 (603)
Q Consensus 371 ~~~~~~~~~v~l~eve~G~~yELVvTt~------~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~ 431 (603)
++ ++..|+.|||+|++. .||| ||+|||+++++. ...+.|+||.+|+
T Consensus 361 ------~~-----~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~----dG~l~i~GR~~d~ 425 (542)
T PRK06155 361 ------DQ-----ELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDA----DGWFRFVDRIKDA 425 (542)
T ss_pred ------CC-----CCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEEEcC----CceEEEEecCCCE
Confidence 12 467899999999764 4554 799999999974 6789999999999
Q ss_pred EeeeeeecCHHHHHHHHHHH
Q 007464 432 LTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 432 i~v~Gekv~e~~v~~av~~a 451 (603)
++++|+++++.+||++|.+.
T Consensus 426 i~~~G~~v~p~eIE~~l~~~ 445 (542)
T PRK06155 426 IRRRGENISSFEVEQVLLSH 445 (542)
T ss_pred EEeCCEEECHHHHHHHHHhC
Confidence 99999999999999999753
No 23
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.41 E-value=8.9e-11 Score=130.02 Aligned_cols=134 Identities=17% Similarity=0.187 Sum_probs=92.7
Q ss_pred ccCCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCC--CCCCccccceeecCCceEEEEEeCC
Q 007464 290 ELFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN--PSLPPELATFAVLPNIGYFEFIPQR 364 (603)
Q Consensus 290 ~lWP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~--~~~~~~~~~~~l~~~~~~~EFip~~ 364 (603)
...++++ .+..||. ....+.+++.+ +++++ +.||+||+.+..... ..+..+..+. ..+ +..+.+++++
T Consensus 266 ~~~~~lr---~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~-~~~v~i~d~~ 338 (504)
T PRK07514 266 EAAAHMR---LFISGSAPLLAETHREFQERT-GHAIL-ERYGMTETNMNTSNPYDGERRAGTVGF-PLP-GVSLRVTDPE 338 (504)
T ss_pred cccccee---eEEecCCCCCHHHHHHHHHHh-CCcce-eecccccccccccCCccccccCccccc-CCC-CcEEEEEECC
Confidence 3456788 6677763 44555666767 57888 999999985432211 1111111222 222 3455566533
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEee
Q 007464 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 427 (603)
Q Consensus 365 ~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR 427 (603)
+.+ .++.|+.|||+|++ ..||| +|+|||+++.+. ...+.|.||
T Consensus 339 -----------~~~-----~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~~GR 398 (504)
T PRK07514 339 -----------TGA-----ELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDE----RGYVHIVGR 398 (504)
T ss_pred -----------CCC-----CCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcC----CccEEEecc
Confidence 122 35679999999977 45666 399999999985 568999999
Q ss_pred cCceEeeeeeecCHHHHHHHHHH
Q 007464 428 RNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 428 ~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
.+|+++++|+++++.+||+++.+
T Consensus 399 ~~~~i~~~G~~i~~~~IE~~l~~ 421 (504)
T PRK07514 399 GKDLIISGGYNVYPKEVEGEIDE 421 (504)
T ss_pred ccceEEeCCeEECHHHHHHHHHh
Confidence 99999999999999999999875
No 24
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.40 E-value=5.5e-11 Score=134.42 Aligned_cols=133 Identities=18% Similarity=0.240 Sum_probs=92.7
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCccccceeecCCceEEEEEeCCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~---~~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
+++++ .++.||. ....+++++.+ +++++ +.||+||+...+...+. ..++..|. ..|+ ..+++++.+
T Consensus 335 ~~~lr---~i~~gg~~l~~~~~~~~~~~~-~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~- 406 (573)
T PRK05605 335 LSGVR---NAFSGAMALPVSTVELWEKLT-GGLLV-EGYGLTETSPIIVGNPMSDDRRPGYVGV-PFPD-TEVRIVDPE- 406 (573)
T ss_pred chhcc---EEEECCCcCCHHHHHHHHHHh-CCCee-cccccchhchhhhcCCcccCCcCCcccc-CCCC-CEEEEEcCC-
Confidence 45788 6666763 45556666666 57888 99999997533222221 11222333 2233 356666654
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
+. +. .+..|+.|||+|++ +.|+| +|+|||+++.+. ...+.|+||.+
T Consensus 407 -~~--------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~gR~d 468 (573)
T PRK05605 407 -DP--------DE-----TMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEE----DGFIRIVDRIK 468 (573)
T ss_pred -CC--------Cc-----cCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCcccCCEEEEcC----CCcEEEEeccc
Confidence 11 12 45679999999976 35666 699999999975 57899999999
Q ss_pred ceEeeeeeecCHHHHHHHHHH
Q 007464 430 LLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 430 ~~i~v~Gekv~e~~v~~av~~ 450 (603)
|+++++|++|++.+||+++..
T Consensus 469 d~i~~~G~~v~p~eIE~~l~~ 489 (573)
T PRK05605 469 ELIITGGFNVYPAEVEEVLRE 489 (573)
T ss_pred cceeeCCEEECHHHHHHHHHh
Confidence 999999999999999999975
No 25
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.40 E-value=2.4e-10 Score=131.04 Aligned_cols=133 Identities=9% Similarity=0.048 Sum_probs=88.7
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCccccee-cCCCC-----CCccccceeecCCceEEEEEe
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGA-NVNPS-----LPPELATFAVLPNIGYFEFIP 362 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i-~~~~~-----~~~~~~~~~l~~~~~~~EFip 362 (603)
.++|+ .+.+||. ....+.+++.+ +.+++ +.||+||....+ ...+. .+.+..|.. .|+ .-+..++
T Consensus 353 l~~lr---~~~~gGe~l~~~~~~~~~~~~-~~~~~-~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p-~~g-~~v~i~d 425 (628)
T TIGR02316 353 LSSLH---WLFLAGEPLDEPTAHWITDGL-GKPVI-DNYWQTETGWPVLAIMPGLDLKPVKLGSPGLP-MYG-YHLRVLD 425 (628)
T ss_pred cccee---EEEEecCCCCHHHHHHHHHHh-CCCEE-ecccccccCceeecCCCCCCcCCCCCCCcccC-cCC-ceEEEEE
Confidence 46788 6666663 44555566667 47888 999999975322 11111 111222332 222 2233343
Q ss_pred CCCCCcccccccCCCccccccccCCCCeEEEEEccc------ccee-----------------eceeCCEEEEeceeCCC
Q 007464 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV------AGLY-----------------RYRLGDVVKVMGFHNST 419 (603)
Q Consensus 363 ~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~------~GL~-----------------RYr~GDvvrv~g~~~~~ 419 (603)
.+ +++ ++..|+.|||+|+.- .|+| +|+|||+++.+. .
T Consensus 426 ~~-----------~g~-----~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~----d 485 (628)
T TIGR02316 426 EA-----------TGR-----PCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDE----D 485 (628)
T ss_pred CC-----------CCC-----CCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcC----C
Confidence 32 122 456799999999763 3333 599999999885 6
Q ss_pred CEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 420 PELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 420 P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
..+.|+||.+|+|+++|++|++.|||++|.+.
T Consensus 486 G~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~ 517 (628)
T TIGR02316 486 GYTFILGRTDDVINVAGHRLGTREIEESVSSH 517 (628)
T ss_pred CcEEEEEcCcceEEeCCEEeCHHHHHHHHHhC
Confidence 78999999999999999999999999999753
No 26
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.40 E-value=6.8e-11 Score=137.41 Aligned_cols=133 Identities=15% Similarity=0.158 Sum_probs=92.8
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC--CCccccceeecCCceEEEEEeCCCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS--LPPELATFAVLPNIGYFEFIPQRLG 366 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~--~~~~~~~~~l~~~~~~~EFip~~~~ 366 (603)
+++++ ++++||. ....+++.+.+++++++ +.||+||+......... ..+...|.. .++ ..++.++.+
T Consensus 259 ~~slr---~i~~gGe~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~iG~p-~~~-~~v~i~d~~-- 330 (705)
T PRK06060 259 FRSLR---CVVSAGEALELGLAERLMEFFGGIPIL-DGIGSTEVGQTFVSNRVDEWRLGTLGRV-LPP-YEIRVVAPD-- 330 (705)
T ss_pred cccee---EEEEecCcCCHHHHHHHHHHcCCCceE-eeeeccccCceEEeccCCCCCcCccccc-CCC-cEEEEECCC--
Confidence 45788 6677763 55666777888778999 99999997532221111 111122332 233 334444332
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee-----------eceeCCEEEEeceeCCCCEEEEEeecCceE
Q 007464 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 432 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-----------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i 432 (603)
++ .+..|+.|||+|++ ..||| +|+|||+++.+. ...+.|+||.+|++
T Consensus 331 ----------g~-----~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~~~~~~~TGDl~~~~~----dG~l~~~GR~dd~i 391 (705)
T PRK06060 331 ----------GT-----TAGPGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRDRVCIDS----DGWVTYRCRADDTE 391 (705)
T ss_pred ----------CC-----CCCCCCceEEEEccchhhhhhhCCCcccccCCCcEECCeeEEECC----CceEEEecccCceE
Confidence 12 35679999999976 35555 499999999875 67899999999999
Q ss_pred eeeeeecCHHHHHHHHHHH
Q 007464 433 TINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 433 ~v~Gekv~e~~v~~av~~a 451 (603)
+++|++|+..+||++|.+.
T Consensus 392 k~~G~~v~~~eIE~~l~~~ 410 (705)
T PRK06060 392 VIGGVNVDPREVERLIIED 410 (705)
T ss_pred EECCEEECHHHHHHHHHhC
Confidence 9999999999999999763
No 27
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.40 E-value=2.6e-11 Score=136.62 Aligned_cols=131 Identities=21% Similarity=0.248 Sum_probs=91.9
Q ss_pred CCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC----CccccceeecCCceEEEEEeCCCC
Q 007464 294 NAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL----PPELATFAVLPNIGYFEFIPQRLG 366 (603)
Q Consensus 294 ~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~----~~~~~~~~l~~~~~~~EFip~~~~ 366 (603)
+++ ++++||. ....+++++.++..+++ .+||+||+...+...+.. ..+.+|.. .|+ .|..-.+
T Consensus 292 ~lr---~~~~gg~~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~-~pg---~~v~Ivd-- 361 (534)
T COG0318 292 SLR---LVLSGGAPLPPELLERFEERFGPIAIL-EGYGLTETSPVVTINPPDDLLAKPGSVGRP-LPG---VEVRIVD-- 361 (534)
T ss_pred ceE---EEEecCCcCCHHHHHHHHHHhCCCceE-EeecccccCceeecCCCchhhhcCCccccc-CCC---cEEEEEe--
Confidence 477 8888884 66777788888656788 999999986433222221 12223332 222 3443333
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
+++ .+ +.+|+.|||+|.. +.||| ||+|||+++++. .+.+.|+||.+
T Consensus 362 ~~~-------~~------~~pg~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~----~G~l~i~gR~k 424 (534)
T COG0318 362 PDG-------GE------VLPGEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDE----DGYLYIVGRLK 424 (534)
T ss_pred CCC-------Cc------cCCCCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcC----CccEEEEeccc
Confidence 111 11 2238899999954 57766 599999998886 58899999999
Q ss_pred ceEeeeeeecCHHHHHHHHHHH
Q 007464 430 LLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 430 ~~i~v~Gekv~e~~v~~av~~a 451 (603)
|+|+.+||||++.+||+++.+.
T Consensus 425 d~I~~gG~ni~p~eiE~~l~~~ 446 (534)
T COG0318 425 DLIISGGENIYPEEIEAVLAEH 446 (534)
T ss_pred eEEEeCCeEECHHHHHHHHHhC
Confidence 9999999999999999999865
No 28
>PLN02654 acetate-CoA ligase
Probab=99.39 E-value=2.1e-10 Score=132.65 Aligned_cols=226 Identities=12% Similarity=0.066 Sum_probs=128.2
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCC--CCeeccccccCcccc-eecCCCCC---CccccceeecCCceEEEEEeC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGD--LPLMSADYGSSEGWI-GANVNPSL---PPELATFAVLPNIGYFEFIPQ 363 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg--~~i~~~~YgaSEg~~-~i~~~~~~---~~~~~~~~l~~~~~~~EFip~ 363 (603)
++|+ .+.+||. ....+.+.+.+|+ +++. +.||+||+.. .+...+.. .++..+.. .|+. -+..++.
T Consensus 397 ~~Lr---~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~-~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p-~~g~-~v~i~d~ 470 (666)
T PLN02654 397 KSLR---VLGSVGEPINPSAWRWFFNVVGDSRCPIS-DTWWQTETGGFMITPLPGAWPQKPGSATFP-FFGV-QPVIVDE 470 (666)
T ss_pred hhee---EEEEecCCCCHHHHHHHHHHhCCCCCcee-ccccccccCCeeeccCCCCCCCCCCccCCC-CCCc-eEEEECC
Confidence 4677 6666663 3444556666753 7888 9999999642 22111111 12223332 2222 1222321
Q ss_pred CCCCcccccccCCCccccccccCCCCeEEEEEcc-----cccee----------------eceeCCEEEEeceeCCCCEE
Q 007464 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN-----VAGLY----------------RYRLGDVVKVMGFHNSTPEL 422 (603)
Q Consensus 364 ~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt-----~~GL~----------------RYr~GDvvrv~g~~~~~P~i 422 (603)
. ++ +++.|+.|||+|+. +.|+| +|+|||+++++. ...+
T Consensus 471 ----~--------g~-----~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~----dG~l 529 (666)
T PLN02654 471 ----K--------GK-----EIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDK----DGYY 529 (666)
T ss_pred ----C--------CC-----CCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECC----CCcE
Confidence 1 22 34567789999975 23444 499999999985 6899
Q ss_pred EEEeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEe--ecCCCCCceEEEEEEeccC--CCHHHHHHHHH
Q 007464 423 KFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSH--VDLSTDPGHYVIFWEVSGE--VNDEVLKECCN 498 (603)
Q Consensus 423 ~f~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~--~~~~~~~~hy~l~vE~~~~--~~~~~l~~~~~ 498 (603)
.|+||.+|+|+++|++|++.|||++|.+. .+ +.+-.++ ++.. ..-.-..||.+..+ .+.+..+++..
T Consensus 530 ~i~GR~dd~I~~~G~ri~p~EIE~~l~~~------p~--V~eaaVvg~~d~~-~ge~~~a~Vvl~~~~~~~~~l~~~l~~ 600 (666)
T PLN02654 530 WLTGRVDDVINVSGHRIGTAEVESALVSH------PQ--CAEAAVVGIEHEV-KGQGIYAFVTLVEGVPYSEELRKSLIL 600 (666)
T ss_pred EEeeeccCeEEeCCEEECHHHHHHHHHhC------CC--eeeEEEEeeEcCC-CCeEEEEEEEECCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999853 12 3344443 2221 11233466666433 22222233434
Q ss_pred HHHHhccChhhHHHhhcCCcCCeEEEEec------cChHHHHHHHHhcCCCCCCCCCcCcccCCCCHHHHHHHhc
Q 007464 499 CLDRSFVDAGYVSARKVNAIGPLELRVVL------KGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCN 567 (603)
Q Consensus 499 ~ld~~L~n~~Y~~~R~~g~l~p~~v~~v~------~GtF~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~ 567 (603)
.+.+.| .....|-.|.+|+ .|-..+-.=..+..|. ..+.+.+.-+. |++.++.+.+
T Consensus 601 ~~~~~L----------~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~ 662 (666)
T PLN02654 601 TVRNQI----------GAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ-LDELGDTSTLA--DPGVVDQLIA 662 (666)
T ss_pred HHHHhC----------CCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCC-CCCCCCccccc--CHHHHHHHHH
Confidence 444443 1123455676663 3432221111122343 22567777788 8999888764
No 29
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.39 E-value=5.4e-11 Score=131.43 Aligned_cols=132 Identities=13% Similarity=0.248 Sum_probs=87.6
Q ss_pred CCCCceeeEEeecChHHHHHHHHHHh-CCCCeeccccccCcccc--eecCCCC---CCccccceeecCCceEEEEEeCCC
Q 007464 292 FPNAKYLSGIMTGSMEHYLKKLRHYA-GDLPLMSADYGSSEGWI--GANVNPS---LPPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 292 WP~L~~i~~~~~G~~~~y~~~l~~~~-gg~~i~~~~YgaSEg~~--~i~~~~~---~~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
.++++ .+.+||...-...++++. .+++++ +.||+||+.. +++.++. ..++..|.. . .+..+++++.+
T Consensus 251 ~~~l~---~~~~gG~~~~~~~~~~~~~~g~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~-~-~~~~~~i~d~~- 323 (488)
T PRK09088 251 LRHLT---ALFTGGAPHAAEDILGWLDDGIPMV-DGFGMSEAGTVFGMSVDCDVIRAKAGAAGIP-T-PTVQTRVVDDQ- 323 (488)
T ss_pred cccce---EEEecCCCCCHHHHHHHHHhCCcee-eeecccccccccccCCCcccccccCCccccC-C-CCcEEEEECCC-
Confidence 35677 777777422222233322 258999 8999999743 2221111 112223322 2 33445555432
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeec
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~ 428 (603)
+. +++.|+.|||+|++ ..||| +|+|||+++++. ...+.|+||.
T Consensus 324 -----------~~-----~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~ 383 (488)
T PRK09088 324 -----------GN-----DCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDA----DGFFWVVDRK 383 (488)
T ss_pred -----------CC-----CCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcC----CCcEEEeccc
Confidence 12 35678999999987 35555 499999999985 5789999999
Q ss_pred CceEeeeeeecCHHHHHHHHHH
Q 007464 429 NLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 429 ~~~i~v~Gekv~e~~v~~av~~ 450 (603)
+|+++++|+++++.+||++|.+
T Consensus 384 ~d~i~~~G~~i~~~~iE~~l~~ 405 (488)
T PRK09088 384 KDMFISGGENVYPAEIEAVLAD 405 (488)
T ss_pred cceEEeCCEEECHHHHHHHHHh
Confidence 9999999999999999999874
No 30
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.38 E-value=8.5e-11 Score=131.92 Aligned_cols=134 Identities=14% Similarity=0.153 Sum_probs=91.5
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecC-CCC--CCccccceeecCCceEEEEEeCCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANV-NPS--LPPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~-~~~--~~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
+++++ .++.||. ....+.+++.+ +++++ +.||+||+...... .+. ..++..|+.+ + +..++.+..+
T Consensus 311 ~~~l~---~i~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~-~-~~~~~v~~~d- 382 (541)
T TIGR03205 311 LSSLA---TIGSGGAPLPVEVANFFERKT-GLKLK-SGWGMTETCSPGTGHPPEGPDKPGSIGLML-P-GIELDVVSLD- 382 (541)
T ss_pred ccccc---eEEEccccCCHHHHHHHHHHh-CCCee-cccccccCCcccccCCCCCCCCCCCcceec-c-CceeEEEecC-
Confidence 34677 6777773 44556666667 58998 99999997432211 111 1122344443 2 2234444433
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
+. .+ +++.|+.|||+|++ +.||| ||+|||++++.. ...+.|+||.+
T Consensus 383 -~~--------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~i~GR~~ 444 (541)
T TIGR03205 383 -DP--------TK-----VLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDT----DGYFFLVDRKK 444 (541)
T ss_pred -CC--------Cc-----cCCCCCeeEEEEecCCccccccCChhhhHhhhccCCcccCceEEEcC----CceEEEEcccc
Confidence 11 12 45679999999987 35555 699999999874 56899999999
Q ss_pred ceEeeeeeecCHHHHHHHHHHH
Q 007464 430 LLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 430 ~~i~v~Gekv~e~~v~~av~~a 451 (603)
++++++|+++++.+||+++.+.
T Consensus 445 ~~i~~~G~~i~~~eIE~~l~~~ 466 (541)
T TIGR03205 445 DMIISGGFNVYPQMIEQAIYEH 466 (541)
T ss_pred CeEEECCEEECHHHHHHHHHhC
Confidence 9999999999999999999753
No 31
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.37 E-value=6e-11 Score=131.05 Aligned_cols=132 Identities=17% Similarity=0.212 Sum_probs=86.1
Q ss_pred CCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCCC-------ccccceeecCCceEEEEE
Q 007464 292 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP-------PELATFAVLPNIGYFEFI 361 (603)
Q Consensus 292 WP~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~~-------~~~~~~~l~~~~~~~EFi 361 (603)
.|+++ .++.|| .....+.+.+.+++++++ +.||+||....+...+.++ ....++. .++.. ...+
T Consensus 259 ~~~l~---~i~~~G~~l~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~-~~i~ 332 (503)
T PRK04813 259 LPNLT---HFLFCGEELPHKTAKKLLERFPSATIY-NTYGPTEATVAVTSIEITDEMLDQYKRLPIGYA-KPDSP-LLII 332 (503)
T ss_pred CCCce---EEEEecCcCCHHHHHHHHHHCCCceEE-eCcccchheeEEEEEEecccccccCCCCccccc-CCCCE-EEEE
Confidence 46788 445554 356667777888778888 9999999643222111110 1011221 11111 1122
Q ss_pred eCCCCCcccccccCCCccccccccCCCCeEEEEEccc---ccee-----------------eceeCCEEEEeceeCCCCE
Q 007464 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-----------------RYRLGDVVKVMGFHNSTPE 421 (603)
Q Consensus 362 p~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~---~GL~-----------------RYr~GDvvrv~g~~~~~P~ 421 (603)
+. . +. .+..|+.|||+|++. .||| +|+|||++++ . ...
T Consensus 333 d~----~--------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~----~g~ 390 (503)
T PRK04813 333 DE----E--------GT-----KLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-E----DGL 390 (503)
T ss_pred CC----C--------CC-----CCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-e----CCe
Confidence 21 1 12 356788999999762 2222 6999999998 3 578
Q ss_pred EEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 422 LKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 422 i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
+.+.||.+|+++++|+++++.+||+++.+.
T Consensus 391 ~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 420 (503)
T PRK04813 391 LFYQGRIDFQIKLNGYRIELEEIEQNLRQS 420 (503)
T ss_pred EEEeccccceEEECcEEeCHHHHHHHHHhC
Confidence 999999999999999999999999998763
No 32
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.37 E-value=1.3e-10 Score=128.71 Aligned_cols=133 Identities=13% Similarity=0.112 Sum_probs=93.1
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC---CC-CccccceeecCCceEEEEEeCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP---SL-PPELATFAVLPNIGYFEFIPQR 364 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~---~~-~~~~~~~~l~~~~~~~EFip~~ 364 (603)
.++++ .+++||. ...++.+.+.+++++++ +.||+||+........ .. .++..+..+ + +.-++.++.+
T Consensus 263 ~~~l~---~~~~gG~~~~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~-~-~~~~~i~~~~ 336 (497)
T PRK06145 263 LDSLA---WCIGGGEKTPESRIRDFTRVFTRARYI-DAYGLTETCSGDTLMEAGREIEKIGSTGRAL-A-HVEIRIADGA 336 (497)
T ss_pred cccce---EEEecCCCCCHHHHHHHHHHcCCCceE-EeecCcccCCcceeccCccccccCCCcccCC-C-CceEEEECCC
Confidence 35777 6676773 55667777788778899 9999999854322111 11 112233322 2 2334444322
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeec
Q 007464 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (603)
Q Consensus 365 ~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~ 428 (603)
.. .+..|+.|||++++ +.||| +|+|||+++.+. ...+.++||.
T Consensus 337 ------------~~-----~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~ 395 (497)
T PRK06145 337 ------------GR-----WLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGYLDE----EGFLYLTDRK 395 (497)
T ss_pred ------------CC-----CCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEEEcC----CCcEEEeccc
Confidence 12 35678999999976 46676 599999999985 6789999999
Q ss_pred CceEeeeeeecCHHHHHHHHHHH
Q 007464 429 NLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 429 ~~~i~v~Gekv~e~~v~~av~~a 451 (603)
+++++++|+++++.+||++|.+.
T Consensus 396 ~~~i~~~G~~v~~~~IE~~l~~~ 418 (497)
T PRK06145 396 KDMIISGGENIASSEVERVIYEL 418 (497)
T ss_pred cceEEeCCeEECHHHHHHHHHhC
Confidence 99999999999999999999764
No 33
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.37 E-value=2.4e-10 Score=128.18 Aligned_cols=133 Identities=17% Similarity=0.169 Sum_probs=90.6
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC-C-CccccceeecCCceEEEEEeCCCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS-L-PPELATFAVLPNIGYFEFIPQRLG 366 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~-~-~~~~~~~~l~~~~~~~EFip~~~~ 366 (603)
+++++ .+++||. ....+++.+.+ +++++ +.||+||+.......+. . ..+..|.. .|+ .-+..++.+
T Consensus 304 ~~~l~---~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~~-~~g-~~~~i~d~~-- 374 (546)
T PRK08314 304 LSSLR---YIGGGGAAMPEAVAERLKELT-GLDYV-EGYGLTETMAQTHSNPPDRPKLQCLGIP-TFG-VDARVIDPE-- 374 (546)
T ss_pred chhhh---eeeeccccCCHHHHHHHHHHc-CCcEE-ecccccccccceecCCCcCCCCCccCcc-cCC-eEEEEEeCC--
Confidence 46777 6677773 44556666667 58888 99999997543322211 1 11112222 222 223333322
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee-----------------eceeCCEEEEeceeCCCCEEEEEe
Q 007464 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------------RYRLGDVVKVMGFHNSTPELKFIC 426 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-----------------RYr~GDvvrv~g~~~~~P~i~f~g 426 (603)
++ ..++.|+.|||+|.+ +.||| +|+|||+++++. ...+.++|
T Consensus 375 ---------~~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~----~g~l~~~G 436 (546)
T PRK08314 375 ---------TL-----EELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDE----EGYFFITD 436 (546)
T ss_pred ---------CC-----cCCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcC----CCcEEEEe
Confidence 12 245789999999966 35554 799999999985 57899999
Q ss_pred ecCceEeeeeeecCHHHHHHHHHHH
Q 007464 427 RRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 427 R~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
|.+|+++++|++|++.+||++|.+.
T Consensus 437 R~~d~i~~~G~~v~~~eIE~~i~~~ 461 (546)
T PRK08314 437 RLKRMINASGFKVWPAEVENLLYKH 461 (546)
T ss_pred cchhhEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999999864
No 34
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.37 E-value=8.3e-11 Score=132.07 Aligned_cols=159 Identities=10% Similarity=0.046 Sum_probs=101.8
Q ss_pred CCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCC-----CccccceeecCCceEEEEEeC
Q 007464 292 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL-----PPELATFAVLPNIGYFEFIPQ 363 (603)
Q Consensus 292 WP~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~-----~~~~~~~~l~~~~~~~EFip~ 363 (603)
+++++ .++.|| .....+.+.+.+++.++. +.||+||+.........+ .....|.. .| +..++.++.
T Consensus 316 ~~~lr---~i~~~G~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p-~~-~~~~~i~d~ 389 (558)
T PRK12583 316 LSSLR---TGIMAGAPCPIEVMRRVMDEMHMAEVQ-IAYGMTETSPVSLQTTAADDLERRVETVGRT-QP-HLEVKVVDP 389 (558)
T ss_pred chhhe---EEEecCCCCCHHHHHHHHHHcCCccee-ccccccccccceeccCcccccccccCCCCcc-CC-CCeEEEECC
Confidence 46788 556565 255556677777666788 999999985432211111 01123332 22 334555543
Q ss_pred CCCCcccccccCCCccccccccCCCCeEEEEEccc---ccee--------------eceeCCEEEEeceeCCCCEEEEEe
Q 007464 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFIC 426 (603)
Q Consensus 364 ~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~---~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~g 426 (603)
+ + .+++.|+.|||+|++. .||| +|+|||+++.+. ...+.|.|
T Consensus 390 ~----~-------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----dg~l~i~G 448 (558)
T PRK12583 390 D----G-------------ATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDE----QGYVRIVG 448 (558)
T ss_pred C----C-------------CCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECC----CccEEEEe
Confidence 2 1 2457899999999763 4554 599999999875 57899999
Q ss_pred ecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeec-CCCCCceEEEEEEec
Q 007464 427 RRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD-LSTDPGHYVIFWEVS 485 (603)
Q Consensus 427 R~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~-~~~~~~hy~l~vE~~ 485 (603)
|.+++++++|++|++.+||++|.+. .+ +.+..++.. .......-+.+++..
T Consensus 449 R~~~~i~~~G~~v~~~~IE~~l~~~------~~--v~~~~v~~~~~~~~~~~~~~~v~~~ 500 (558)
T PRK12583 449 RSKDMIIRGGENIYPREIEEFLFTH------PA--VADVQVFGVPDEKYGEEIVAWVRLH 500 (558)
T ss_pred cccceeEECCEEeCHHHHHHHHHhC------CC--eeEEEEEeeecCCCCcEEEEEEEEC
Confidence 9999999999999999999998742 23 345555432 111223445667764
No 35
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.36 E-value=8.9e-11 Score=143.01 Aligned_cols=133 Identities=17% Similarity=0.199 Sum_probs=93.2
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCC-CC-----------CCccccceeecCCce
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS-----------LPPELATFAVLPNIG 356 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~-~~-----------~~~~~~~~~l~~~~~ 356 (603)
.++++ .+.+||. ...++++++.+ +++++ +.||+||+...+... +. +.++..|.. .| +.
T Consensus 897 ~~~lr---~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p-~~-~~ 969 (1146)
T PRK08633 897 FASLR---LVVAGAEKLKPEVADAFEEKF-GIRIL-EGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMP-LP-GV 969 (1146)
T ss_pred CCCee---eEEEcCCcCCHHHHHHHHHHh-CCCee-cccccccCcceEEEecCcccccccccccCCCCCCcccc-CC-CC
Confidence 56788 6777773 55666777777 58998 999999974322111 10 111223332 22 23
Q ss_pred EEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee-----------------eceeCCEEEEecee
Q 007464 357 YFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------------RYRLGDVVKVMGFH 416 (603)
Q Consensus 357 ~~EFip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-----------------RYr~GDvvrv~g~~ 416 (603)
-++.++++ ++ .++++|+.|||+|++ ..||| +|+|||+++++.
T Consensus 970 ~v~i~d~~-----------~~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~-- 1031 (1146)
T PRK08633 970 AVRIVDPE-----------TF-----EELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDE-- 1031 (1146)
T ss_pred EEEEEcCC-----------CC-----ccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcC--
Confidence 44555432 11 256789999999976 35554 599999999985
Q ss_pred CCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 417 NSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 417 ~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
...+.|+||.+|+++++|+++++.|||+++.+.
T Consensus 1032 --~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~ 1064 (1146)
T PRK08633 1032 --DGFLTITDRYSRFAKIGGEMVPLGAVEEELAKA 1064 (1146)
T ss_pred --CceEEEEecccchhhhCcEEECHHHHHHHHHhc
Confidence 688999999999999999999999999999864
No 36
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.36 E-value=2.1e-10 Score=127.36 Aligned_cols=132 Identities=17% Similarity=0.197 Sum_probs=88.6
Q ss_pred CCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccc-eecCCCC---CCccccceeecCCceEEEEEeCCC
Q 007464 293 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPS---LPPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 293 P~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaSEg~~-~i~~~~~---~~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
++++ .+..|| .....+.+++.+++++++ +.||+||+.. +....+. ...+..|..+ ++ .-+..++.+
T Consensus 286 ~~l~---~~~~gg~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~-~~-~~~~i~~~~- 358 (523)
T PRK08316 286 SSLR---KGYYGASIMPVEVLKELRERLPGLRFY-NCYGQTEIAPLATVLGPEEHLRRPGSAGRPV-LN-VETRVVDDD- 358 (523)
T ss_pred ccce---EEEEcCCcCCHHHHHHHHHHcCCCcee-eeecccccCccccccCccccccccCCcccCC-CC-cEEEEEcCC-
Confidence 4566 555555 245567778878788999 9999999643 3221111 1111122221 21 122222221
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
+. .+..|+.|||++++ ..|+| +|+|||+++.+. ...+.++||.+
T Consensus 359 -----------~~-----~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~i~gR~~ 418 (523)
T PRK08316 359 -----------GN-----DVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGVMDE----EGYITVVDRKK 418 (523)
T ss_pred -----------CC-----CCCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEEEcC----CceEEEecccc
Confidence 12 35679999999977 35555 599999999985 67899999999
Q ss_pred ceEeeeeeecCHHHHHHHHHHH
Q 007464 430 LLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 430 ~~i~v~Gekv~e~~v~~av~~a 451 (603)
++++++|+++++.+||++|.+.
T Consensus 419 ~~i~~~G~~i~~~~iE~~l~~~ 440 (523)
T PRK08316 419 DMIKTGGENVASREVEEALYTH 440 (523)
T ss_pred cEEEeCCeEECHHHHHHHHHhC
Confidence 9999999999999999999653
No 37
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.36 E-value=3e-10 Score=127.32 Aligned_cols=110 Identities=18% Similarity=0.165 Sum_probs=78.0
Q ss_pred CCCeeccccccCcccceecCCCCCC-----ccccceeecCCceEEEEEeCCCCCcccccccCCCccccccccCCCCeEEE
Q 007464 319 DLPLMSADYGSSEGWIGANVNPSLP-----PELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEI 393 (603)
Q Consensus 319 g~~i~~~~YgaSEg~~~i~~~~~~~-----~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~v~l~eve~G~~yEL 393 (603)
+++++ +.||+||+...+....... ....+.++. .+...++++++ +++ .++.|+.|||
T Consensus 319 ~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~i~d~~-----------~~~-----~~~~g~~Gel 380 (540)
T PRK06164 319 GVPLT-GLYGSSEVQALVALQPATDPVSVRIEGGGRPAS-PEARVRARDPQ-----------DGA-----LLPDGESGEI 380 (540)
T ss_pred CCcee-cceeeccccceeeccCCCCCCcceeccCccccC-CCeEEEEecCC-----------CCc-----CCCCCCeeEE
Confidence 58888 9999999854433222110 111233222 23345666543 122 4578999999
Q ss_pred EEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHH
Q 007464 394 IVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 394 VvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
+|++ +.||| +|+|||++++++ ...+.|+||.+++++++|+++++.+|++++.+
T Consensus 381 ~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~ 450 (540)
T PRK06164 381 EIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRG----DGQFVYQTRMGDSLRLGGFLVNPAEIEHALEA 450 (540)
T ss_pred EEecccccccccCCchhhhhcccCCCceecCCeEEEcC----CceEEEEeecCCeEEECCEEcCHHHHHHHHHh
Confidence 9988 35554 599999999985 57899999999999999999999999999975
No 38
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.36 E-value=4.2e-10 Score=129.66 Aligned_cols=226 Identities=14% Similarity=0.090 Sum_probs=127.7
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhC-CCCeeccccccCcccceecCC-CCC--CccccceeecCCceEEEEEeCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAG-DLPLMSADYGSSEGWIGANVN-PSL--PPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~g-g~~i~~~~YgaSEg~~~i~~~-~~~--~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
++|+ .+.+||. ....+.+.+.++ ++++. +.||+||....+... +.. .++..+.. .|+ .-+..++.
T Consensus 383 ~sLr---~i~~~Ge~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~p-~~g-~~~~ivd~-- 454 (655)
T PRK03584 383 SALR---TIGSTGSPLPPEGFDWVYEHVKADVWLA-SISGGTDICSCFVGGNPLLPVYRGEIQCR-GLG-MAVEAWDE-- 454 (655)
T ss_pred hheE---EEEEecCCCCHHHHHHHHHHhCCCceEE-eccChHhhhcccccCCCCCCcCCCccCCC-cCC-ceeEEECC--
Confidence 4677 6677763 445556666663 57888 999999963222111 111 11222221 222 22223322
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEccc-----ccee------------------eceeCCEEEEeceeCCCCEE
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV-----AGLY------------------RYRLGDVVKVMGFHNSTPEL 422 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~-----~GL~------------------RYr~GDvvrv~g~~~~~P~i 422 (603)
+ ++ ++ .|+.|||+|+.. .||| .|+|||+++++. ...+
T Consensus 455 --~--------g~-----~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l 514 (655)
T PRK03584 455 --D--------GR-----PV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITE----HGGV 514 (655)
T ss_pred --C--------CC-----CC-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECC----CCeE
Confidence 1 22 23 588999999752 3444 278999999985 6799
Q ss_pred EEEeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEee-cCCCCCceEEEEEEeccC--CCHHHHHHHHHH
Q 007464 423 KFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHV-DLSTDPGHYVIFWEVSGE--VNDEVLKECCNC 499 (603)
Q Consensus 423 ~f~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~-~~~~~~~hy~l~vE~~~~--~~~~~l~~~~~~ 499 (603)
.|+||.+|+|+++|++|++.|||++|.+. .+ |.+-.++. +.......-++||++..+ .+.+..+++.+.
T Consensus 515 ~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~------p~--V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~ 586 (655)
T PRK03584 515 VIYGRSDATLNRGGVRIGTAEIYRQVEAL------PE--VLDSLVIGQEWPDGDVRMPLFVVLAEGVTLDDALRARIRTT 586 (655)
T ss_pred EEEeeccCeeecCcEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999753 22 23443332 111122345577877543 222223344444
Q ss_pred HHHhccChhhHHHhhcCCcCCeEEEEec------cChHHH-HHHHHhcCCCCCCCCCcCcccCCCCHHHHHHHhc
Q 007464 500 LDRSFVDAGYVSARKVNAIGPLELRVVL------KGTFQQ-ILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCN 567 (603)
Q Consensus 500 ld~~L~n~~Y~~~R~~g~l~p~~v~~v~------~GtF~~-~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~ 567 (603)
+.+.| . ....|-.|.+|+ .|--.+ .++. +..|...+|...+.-+. |++.++.+.+
T Consensus 587 ~~~~L-~---------~~~~P~~i~~v~~lP~t~sGKi~r~~lr~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 648 (655)
T PRK03584 587 IRTNL-S---------PRHVPDKIIAVPDIPRTLSGKKVELPVKK-LLHGRPVKKAVNRDALA--NPEALDWFAD 648 (655)
T ss_pred HHhhC-C---------CCcCCCEEEECCCCCCCCCccchHHHHHH-HHcCCCCCCCCCccccc--CHHHHHHHHH
Confidence 44443 1 123455666653 333222 2222 22455555554556666 8888887754
No 39
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.35 E-value=1.7e-10 Score=127.68 Aligned_cols=127 Identities=15% Similarity=0.069 Sum_probs=90.5
Q ss_pred EEeecC--hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CccccceeecCCceEEEEEeCCCCCccccccc
Q 007464 300 GIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRLGNLESQVLC 374 (603)
Q Consensus 300 ~~~~G~--~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~ 374 (603)
.+.+|+ ......++.+.+++++++ +.||+||+.......+.. .+...|..+ + +..++.++.+
T Consensus 258 ~~~~G~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~-~-~~~~~i~d~~---------- 324 (487)
T PRK07638 258 IISSGAKWEAEAKEKIKNIFPYAKLY-EFYGASELSFVTALVDEESERRPNSVGRPF-H-NVQVRICNEA---------- 324 (487)
T ss_pred EEEcCCCCCHHHHHHHHHHcCCCeEE-EEecCCccCceEEecccccCCCCCCCCccc-C-CcEEEEECCC----------
Confidence 455555 355667788888888998 999999985433222111 112234322 2 3455555432
Q ss_pred CCCccccccccCCCCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeee
Q 007464 375 IEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDK 438 (603)
Q Consensus 375 ~~~~~v~l~eve~G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gek 438 (603)
+. ++++|+.|||+|++ ..|+| +|+|||+++++. ...+.|+||.+|+++++|++
T Consensus 325 --g~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~----~g~l~i~GR~~d~i~~~G~~ 393 (487)
T PRK07638 325 --GE-----EVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYEDE----EGFIYIVGREKNMILFGGIN 393 (487)
T ss_pred --CC-----CCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEcC----CCeEEEEecCCCeEEeCCEE
Confidence 12 45789999999976 35555 689999999885 67899999999999999999
Q ss_pred cCHHHHHHHHHH
Q 007464 439 NTEKDLQLSVDE 450 (603)
Q Consensus 439 v~e~~v~~av~~ 450 (603)
+++.+||+++.+
T Consensus 394 v~~~eiE~~l~~ 405 (487)
T PRK07638 394 IFPEEIESVLHE 405 (487)
T ss_pred ECHHHHHHHHHh
Confidence 999999999975
No 40
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.35 E-value=1.2e-10 Score=130.88 Aligned_cols=132 Identities=16% Similarity=0.105 Sum_probs=91.4
Q ss_pred CCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCccccceeecCCceEEEEEeCCC
Q 007464 292 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 292 WP~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~---~~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
+++++ .++.|| ......++++.+| .+++ +.||+||+.......+. ..++..|.. .+ +.-+++++.+
T Consensus 311 ~~~lr---~i~~gG~~l~~~~~~~~~~~~~-~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~p-~~-~~~~~i~d~~- 382 (537)
T PRK13382 311 GRSLR---FAAASGSRMRPDVVIAFMDQFG-DVIY-NNYNATEAGMIATATPADLRAAPDTAGRP-AE-GTEIRILDQD- 382 (537)
T ss_pred cccee---EEEEcCCCCCHHHHHHHHHHcC-CcEE-ecccccccCcceecChhHhccCCCCcccc-Cc-CcEEEEECCC-
Confidence 35678 667776 3556677777784 6888 99999997543221111 011123332 22 3345555432
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEccc---cce----------eeceeCCEEEEeceeCCCCEEEEEeecCceE
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGL----------YRYRLGDVVKVMGFHNSTPELKFICRRNLLL 432 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~---~GL----------~RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i 432 (603)
. .+++.|+.|||+|++. .|| -+|+|||+++.+. ...+.|+||.+|++
T Consensus 383 -----------~-----~~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd~i 442 (537)
T PRK13382 383 -----------F-----REVPTGEVGTIFVRNDTQFDGYTSGSTKDFHDGFMASGDVGYLDE----NGRLFVVGRDDEMI 442 (537)
T ss_pred -----------C-----CCCCCCCeeEEEEEcCCcccCccccchhhccCCCEeeCceEEEeC----CCcEEEecccccee
Confidence 1 2456799999999773 444 2799999999985 57899999999999
Q ss_pred eeeeeecCHHHHHHHHHHH
Q 007464 433 TINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 433 ~v~Gekv~e~~v~~av~~a 451 (603)
+++|++|++.+||.+|.+.
T Consensus 443 k~~G~~v~~~eIE~~l~~~ 461 (537)
T PRK13382 443 VSGGENVYPIEVEKTLATH 461 (537)
T ss_pred EECCEEECHHHHHHHHHhC
Confidence 9999999999999999753
No 41
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.35 E-value=3.4e-10 Score=129.64 Aligned_cols=132 Identities=7% Similarity=0.054 Sum_probs=88.5
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCccccee-cCCCC-----CCccccceeecCCceEEEEEeC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGA-NVNPS-----LPPELATFAVLPNIGYFEFIPQ 363 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i-~~~~~-----~~~~~~~~~l~~~~~~~EFip~ 363 (603)
+.|+ .+.+||. ....+.+++.+ +++++ +.||+||+...+ ...+. ..++..+.. .|+ .-++.++.
T Consensus 355 ~~lr---~i~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p-~~g-~~~~i~d~ 427 (629)
T PRK10524 355 SSLR---ALFLAGEPLDEPTASWISEAL-GVPVI-DNYWQTETGWPILAIARGVEDRPTRLGSPGVP-MYG-YNVKLLNE 427 (629)
T ss_pred hhee---EEEEeCCCCCHHHHHHHHHhc-CCCeE-eccccccccchhhcCCCCcccCcCCCCCcccC-cCC-ceEEEEeC
Confidence 5677 6677773 44555667777 58999 999999975211 11111 111222322 222 22444443
Q ss_pred CCCCcccccccCCCccccccccCCCCeEEEEEccc------ccee-----------------eceeCCEEEEeceeCCCC
Q 007464 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV------AGLY-----------------RYRLGDVVKVMGFHNSTP 420 (603)
Q Consensus 364 ~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~------~GL~-----------------RYr~GDvvrv~g~~~~~P 420 (603)
+ +++ +++.|+.|||+|+.. .|+| +|+|||+++++. ..
T Consensus 428 ~-----------~g~-----~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~----dG 487 (629)
T PRK10524 428 V-----------TGE-----PCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDA----DG 487 (629)
T ss_pred C-----------CCC-----CCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcC----CC
Confidence 1 122 357899999999763 2222 599999999874 67
Q ss_pred EEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 421 ELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 421 ~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
.+.|+||.+|+|+++|++|.+.+||++|.+.
T Consensus 488 ~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~ 518 (629)
T PRK10524 488 YYFILGRTDDVINVAGHRLGTREIEESISSH 518 (629)
T ss_pred cEEEEEEecCeEEeCCEEeCHHHHHHHHHhC
Confidence 8999999999999999999999999999753
No 42
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.35 E-value=1.2e-10 Score=128.94 Aligned_cols=190 Identities=17% Similarity=0.085 Sum_probs=113.6
Q ss_pred cCCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccc-eecCCCCC-------CccccceeecCCceEEE
Q 007464 291 LFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSL-------PPELATFAVLPNIGYFE 359 (603)
Q Consensus 291 lWP~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaSEg~~-~i~~~~~~-------~~~~~~~~l~~~~~~~E 359 (603)
.+++++ .+..|| ....++.+.+.+ +++++ +.||+||+.. +....... .....|.. .| +..++
T Consensus 279 ~~~~l~---~v~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~-~~-~~~~~ 351 (521)
T PRK06187 279 DFSSLR---LVIYGGAALPPALLREFKEKF-GIDLV-QGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRP-LP-GVEAR 351 (521)
T ss_pred Ccchhh---EEEEcCcCCCHHHHHHHHHHh-Ccchh-eeeccCccCcccccCCcccccccccccCCccccc-cC-CeEEE
Confidence 456788 555555 255667777777 68999 9999999643 22211110 11112222 22 33455
Q ss_pred EEeCCCCCcccccccCCCccccccccCC--CCeEEEEEccc---ccee-------------eceeCCEEEEeceeCCCCE
Q 007464 360 FIPQRLGNLESQVLCIEPKPVGLTEVKV--GEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPE 421 (603)
Q Consensus 360 Fip~~~~~~~~~~~~~~~~~v~l~eve~--G~~yELVvTt~---~GL~-------------RYr~GDvvrv~g~~~~~P~ 421 (603)
.++.+ +. ++.. |+.|||+|++. .|++ +|+|||+++.+. .+.
T Consensus 352 i~~~~------------~~-----~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~~~tGD~~~~~~----~g~ 410 (521)
T PRK06187 352 IVDDD------------GD-----ELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETIDGGWLHTGDVGYIDE----DGY 410 (521)
T ss_pred EECCC------------CC-----CCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhhCCceeccceEEEcC----CCC
Confidence 55432 11 3345 99999999884 4444 399999999975 578
Q ss_pred EEEEeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeec-CCCCCceEEEEEEeccCCCHHHHHHHHHHH
Q 007464 422 LKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD-LSTDPGHYVIFWEVSGEVNDEVLKECCNCL 500 (603)
Q Consensus 422 i~f~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~-~~~~~~hy~l~vE~~~~~~~~~l~~~~~~l 500 (603)
+.+.||.+|+++++|+++++.+||+++.+. .+ +.+..+... .......-.++++...... .....+.+.+
T Consensus 411 ~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~------~~--v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~l 481 (521)
T PRK06187 411 LYITDRIKDVIISGGENIYPRELEDALYGH------PA--VAEVAVIGVPDEKWGERPVAVVVLKPGAT-LDAKELRAFL 481 (521)
T ss_pred EEEeecccceEEcCCeEECHHHHHHHHHhC------CC--ceEEEEEeccCCCcCceEEEEEEECCCCC-CCHHHHHHHH
Confidence 999999999999999999999999988753 22 334444332 1112234456777643211 1122333334
Q ss_pred HHhccChhhHHHhhcCCcCCeEEEEec
Q 007464 501 DRSFVDAGYVSARKVNAIGPLELRVVL 527 (603)
Q Consensus 501 d~~L~n~~Y~~~R~~g~l~p~~v~~v~ 527 (603)
.+.| .....|..+++|.
T Consensus 482 ~~~l----------~~~~~p~~i~~v~ 498 (521)
T PRK06187 482 RGRL----------AKFKLPKRIAFVD 498 (521)
T ss_pred HHhc----------cCCCCceEEEEcc
Confidence 4443 1124667777764
No 43
>PLN02246 4-coumarate--CoA ligase
Probab=99.34 E-value=2.4e-10 Score=128.19 Aligned_cols=132 Identities=13% Similarity=0.117 Sum_probs=90.2
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC-------CCccccceeecCCceEEEEEe
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS-------LPPELATFAVLPNIGYFEFIP 362 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~-------~~~~~~~~~l~~~~~~~EFip 362 (603)
++++ .++.||. ....+.+++.++++++. +.||+||+...+..... ..++..|..+ + +.-.+.++
T Consensus 298 ~~lr---~~~~gg~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~-~-~~~~~i~d 371 (537)
T PLN02246 298 SSIR---MVLSGAAPLGKELEDAFRAKLPNAVLG-QGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVV-R-NAELKIVD 371 (537)
T ss_pred ccee---EEEEecCcCCHHHHHHHHHHcCCCeEe-ccccccccCcccccccccCCCCccccCCcccccc-C-CcEEEEec
Confidence 4677 6666663 55566777778777888 99999997532211000 0111223322 2 23344444
Q ss_pred CCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEE
Q 007464 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFI 425 (603)
Q Consensus 363 ~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~ 425 (603)
.+ +. .+++.|+.|||+|+. +.||| +|+|||+++++. ...+.|+
T Consensus 372 ~~-----------~~-----~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~ 431 (537)
T PLN02246 372 PE-----------TG-----ASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDD----DDELFIV 431 (537)
T ss_pred CC-----------CC-----CcCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeC----CCeEEEE
Confidence 32 11 245789999999976 35554 589999999985 5689999
Q ss_pred eecCceEeeeeeecCHHHHHHHHHH
Q 007464 426 CRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 426 gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
||.+|+++++|++|+..+||+++.+
T Consensus 432 GR~dd~i~~~G~~i~~~eIE~~l~~ 456 (537)
T PLN02246 432 DRLKELIKYKGFQVAPAELEALLIS 456 (537)
T ss_pred ecccceEEECCEEECcHHHHHHHHh
Confidence 9999999999999999999999875
No 44
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.34 E-value=2.1e-10 Score=127.03 Aligned_cols=131 Identities=18% Similarity=0.164 Sum_probs=88.1
Q ss_pred CCCCceeeEEeecC---hHHHHHHHHHHhCCC-CeeccccccCcccceecCCCCCC-----ccccceeecCCceEEEEEe
Q 007464 292 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDL-PLMSADYGSSEGWIGANVNPSLP-----PELATFAVLPNIGYFEFIP 362 (603)
Q Consensus 292 WP~L~~i~~~~~G~---~~~y~~~l~~~~gg~-~i~~~~YgaSEg~~~i~~~~~~~-----~~~~~~~l~~~~~~~EFip 362 (603)
.++++ .++.|| ....++.+++.++ + +++ +.||+||+...+...+... +...|. ..+ +.-++.++
T Consensus 280 ~~~l~---~v~~~g~~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-~~~-~~~~~i~d 352 (513)
T PRK07656 280 LSSLR---LAVTGAASMPVALLERFESELG-VDIVL-TGYGLSEASGVTTFNRLDDDRKTVAGTIGT-AIA-GVENKIVN 352 (513)
T ss_pred cccee---eEEecCCCCCHHHHHHHHHHcC-CCceE-eEEccccCCCceeecCccccccccCCCccc-cCC-CcEEEEEC
Confidence 35677 566666 2555666777774 5 788 9999999843222111110 111222 122 23344443
Q ss_pred CCCCCcccccccCCCccccccccCCCCeEEEEEccc---ccee--------------eceeCCEEEEeceeCCCCEEEEE
Q 007464 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFI 425 (603)
Q Consensus 363 ~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~---~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~ 425 (603)
.+ . ..++.|+.|||+|++. .|+| +|+|||+++.+. ...+.++
T Consensus 353 ~~------------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~----~g~~~~~ 411 (513)
T PRK07656 353 EL------------G-----EEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDE----EGYLYIV 411 (513)
T ss_pred CC------------C-----CCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcC----CeeEEEE
Confidence 22 1 2457899999999874 3443 499999999974 6789999
Q ss_pred eecCceEeeeeeecCHHHHHHHHHH
Q 007464 426 CRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 426 gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
||.+|++++.|++++..+||++|.+
T Consensus 412 GR~~d~i~~~G~~v~~~~iE~~l~~ 436 (513)
T PRK07656 412 DRKKDMFIVGGFNVYPAEVEEVLYE 436 (513)
T ss_pred ecccceEEeCCEEeCHHHHHHHHHh
Confidence 9999999999999999999999974
No 45
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.34 E-value=1.8e-10 Score=128.26 Aligned_cols=131 Identities=14% Similarity=0.039 Sum_probs=82.4
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhC-CCCeeccccccCcccceecC-CCCC--CccccceeecCCceEEEEEeCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAG-DLPLMSADYGSSEGWIGANV-NPSL--PPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~g-g~~i~~~~YgaSEg~~~i~~-~~~~--~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
++|+ .+++||. ......+++.++ ++++. +.||+||+..++.. .+.. .++..|.. .++ +|..-.+
T Consensus 236 ~~Lr---~i~~gG~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~p-~~~---~~~~ivd- 306 (499)
T PLN03051 236 SKLR---VFASTGEASAVDDVLWLSSVRGYYKPVI-EYCGGTELASGYISSTLLQPQAPGAFSTA-SLG---TRFVLLN- 306 (499)
T ss_pred hhhe---EEEecCCCCCHHHHHHHHHhccccceeE-eeeccccccceeecccccCCCCCccccCC-CCC---ceEEEEC-
Confidence 5788 6666663 333344444332 37788 99999996432211 1111 11223332 122 2332222
Q ss_pred CCcccccccCCCccccccccCCC--CeEEEEEccc-----ccee---------------------eceeCCEEEEeceeC
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVG--EEYEIIVTNV-----AGLY---------------------RYRLGDVVKVMGFHN 417 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G--~~yELVvTt~-----~GL~---------------------RYr~GDvvrv~g~~~ 417 (603)
+. ++ +++.| +.|||+|... .||| +|+|||+++++.
T Consensus 307 -~~--------g~-----~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~--- 369 (499)
T PLN03051 307 -DN--------GV-----PYPDDQPCVGEVALAPPMLGASDRLLNADHDKVYYKGMPMYGSKGMPLRRHGDIMKRTP--- 369 (499)
T ss_pred -CC--------CC-----CCCCCCCcceEEEEecCcCCCCccccCCcccceeeecCCccccCCcceeecCCeEEECC---
Confidence 11 22 34556 4799999542 2332 589999999985
Q ss_pred CCCEEEEEeecCceEeeeeeecCHHHHHHHHHH
Q 007464 418 STPELKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 418 ~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
...+.|+||.+|+|+++|++|++.|||++|.+
T Consensus 370 -dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~ 401 (499)
T PLN03051 370 -GGYFCVQGRADDTMNLGGIKTSSVEIERACDR 401 (499)
T ss_pred -CCcEEEEeccCCEEeeCCEECCHHHHHHHHHh
Confidence 67899999999999999999999999999985
No 46
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.34 E-value=1e-10 Score=131.00 Aligned_cols=134 Identities=13% Similarity=0.096 Sum_probs=92.1
Q ss_pred cCCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC-------CCCccccceeecCCceEEEE
Q 007464 291 LFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP-------SLPPELATFAVLPNIGYFEF 360 (603)
Q Consensus 291 lWP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~-------~~~~~~~~~~l~~~~~~~EF 360 (603)
-+++++ .+.+||. ...++.+.+.+ +++++ +.||+||+...+...+ ..+....+.+-...+...++
T Consensus 293 ~~~~lr---~i~~~G~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i 367 (534)
T PRK05852 293 KPAALR---FIRSCSAPLTAETAQALQTEF-AAPVV-CAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRI 367 (534)
T ss_pred cCCCee---EEEECCCCCCHHHHHHHHHHh-CCChh-hccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEE
Confidence 357788 6666662 55666777778 58998 8999999743222111 00111122321123444555
Q ss_pred EeCCCCCcccccccCCCccccccccCCCCeEEEEEccc---ccee-------------eceeCCEEEEeceeCCCCEEEE
Q 007464 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKF 424 (603)
Q Consensus 361 ip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~---~GL~-------------RYr~GDvvrv~g~~~~~P~i~f 424 (603)
++.+ ++ ++++|+.|||+|++. .|+| +|+|||+++.+. ...+.|
T Consensus 368 ~d~~------------g~-----~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~----dG~l~~ 426 (534)
T PRK05852 368 VGSD------------GL-----PLPAGAVGEVWLRGTTVVRGYLGDPTITAANFTDGWLRTGDLGSLSA----AGDLSI 426 (534)
T ss_pred ECCC------------CC-----CCCCCCceEEEEecCcccchhcCCcccchhhhcCCCcccCceEEEeC----CCcEEE
Confidence 5432 12 457899999999773 5555 499999999984 578999
Q ss_pred EeecCceEeeeeeecCHHHHHHHHHH
Q 007464 425 ICRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 425 ~gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
+||.+|+++++|+++++.+|++++.+
T Consensus 427 ~gR~~d~i~~~G~~v~~~~iE~~l~~ 452 (534)
T PRK05852 427 RGRIKELINRGGEKISPERVEGVLAS 452 (534)
T ss_pred EecchhhEEECCEEECHHHHHHHHHh
Confidence 99999999999999999999999975
No 47
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.33 E-value=1.4e-10 Score=130.09 Aligned_cols=131 Identities=11% Similarity=0.128 Sum_probs=89.0
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC----CccccceeecCCceEEEEEeCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL----PPELATFAVLPNIGYFEFIPQR 364 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~----~~~~~~~~l~~~~~~~EFip~~ 364 (603)
.|+++ .+++||. ....+++.+.+ +++++ +.||+||+.......+.. .....|.. .|+ .-+++++.+
T Consensus 309 ~~~l~---~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~~g-~~v~i~~~~ 381 (538)
T TIGR03208 309 VPSLF---TFLCAGAPIPGILVERAWELL-GALIV-SAWGMTENGAVTVTEPDDALEKASTTDGRP-LPG-VEVKVIDAN 381 (538)
T ss_pred CCcce---EEEEcCCCCCHHHHHHHHHHc-CCeEE-eeeccCcCCCccccCcccchhhccCccccc-CCC-CEEEEECCC
Confidence 36788 5666663 45555666667 58888 999999974322111111 01112222 222 334444322
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEccc---ccee------------eceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 365 ~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~---~GL~------------RYr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
+. .++.|+.|||+|++. .|+| +|+|||+++.+. ...+.|+||.+
T Consensus 382 ------------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~gR~~ 440 (538)
T TIGR03208 382 ------------GA-----KLSQGETGRLLVRGCSNFGGYLKRPHLNSTDAEGWFDTGDLAFQDA----EGYIRINGRSK 440 (538)
T ss_pred ------------CC-----CCcCCCCcEEEEecCcccccccCCcccccccCCCceeccceEEECC----CCcEEEEeccC
Confidence 12 456799999999773 5666 599999999975 57899999999
Q ss_pred ceEeeeeeecCHHHHHHHHHH
Q 007464 430 LLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 430 ~~i~v~Gekv~e~~v~~av~~ 450 (603)
++++++|++|++.+||++|.+
T Consensus 441 ~~i~~~G~~v~p~eIE~~l~~ 461 (538)
T TIGR03208 441 DVIIRGGENIPVVEIENLLYQ 461 (538)
T ss_pred ceEEECCEEECHHHHHHHHhc
Confidence 999999999999999999975
No 48
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.32 E-value=5.6e-11 Score=134.34 Aligned_cols=149 Identities=14% Similarity=0.176 Sum_probs=88.5
Q ss_pred cCCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCccccceeecCCceEEEEEeCCCCC
Q 007464 291 LFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGN 367 (603)
Q Consensus 291 lWP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~ 367 (603)
..++++ .+++||. ....+++++.+++++++ +.||+||+...+......++..... ......+.......
T Consensus 286 ~~~~lr---~~~~gG~~l~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 357 (563)
T PLN02860 286 VFPSVR---KILNGGGSLSSRLLPDAKKLFPNAKLF-SAYGMTEACSSLTFMTLHDPTLESP----KQTLQTVNQTKSSS 357 (563)
T ss_pred ccccee---EEEeCCCcCCHHHHHHHHHhcCCCcee-cCCCccccCcccccccccccccccc----hhhhhhhccccccc
Confidence 345778 7777773 55666777888889999 9999999743322111100000000 00000010000000
Q ss_pred cccccccCCCcccc-----ccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEE
Q 007464 368 LESQVLCIEPKPVG-----LTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFI 425 (603)
Q Consensus 368 ~~~~~~~~~~~~v~-----l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~ 425 (603)
........-+++++ +...++|+.|||+|.+ +.||| +|+|||+++++. ...+.|+
T Consensus 358 ~~~~~~~~vG~p~~~~~v~i~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~----dG~l~~~ 433 (563)
T PLN02860 358 VHQPQGVCVGKPAPHVELKIGLDESSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDK----AGNLWLI 433 (563)
T ss_pred ccccCCcccCCccCCcEEEEecCCCCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcC----CCCEEEe
Confidence 00000000011111 1111268999999976 45665 689999999974 6789999
Q ss_pred eecCceEeeeeeecCHHHHHHHHHHH
Q 007464 426 CRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 426 gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
||.+|+|+++|++|++.+||+++.+.
T Consensus 434 GR~~d~i~~~G~~v~p~eIE~~l~~~ 459 (563)
T PLN02860 434 GRSNDRIKTGGENVYPEEVEAVLSQH 459 (563)
T ss_pred ecccceeEECCEEccHHHHHHHHHhC
Confidence 99999999999999999999998753
No 49
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.32 E-value=2.2e-10 Score=128.71 Aligned_cols=132 Identities=14% Similarity=0.170 Sum_probs=90.0
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceec-CCCC--CCccccceeecCCceEEEEEeCCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGAN-VNPS--LPPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~-~~~~--~~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
.++++ ++..||. ....+++.+.+ +++++ +.||+||+.+... .+.. ......+..+.|+ ..++.++.+
T Consensus 299 ~~~l~---~v~~gg~~l~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~-~~v~i~d~~- 371 (536)
T PRK10946 299 LASLK---LLQVGGARLSETLARRIPAEL-GCQLQ-QVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPD-DEVWVADAD- 371 (536)
T ss_pred cccee---EEEECCCCCCHHHHHHHHHhc-CCeEE-EeecccccceeeecCCCccccccccCCcccCCC-ceEEEECCC-
Confidence 46788 6777773 45555666677 58998 9999999754432 1110 0011123322222 123333221
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeec
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~ 428 (603)
++ ++..|+.|||+|++ +.||| +|+|||+++.+. ...+.|.||.
T Consensus 372 -----------~~-----~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~----~G~l~~~gR~ 431 (536)
T PRK10946 372 -----------GN-----PLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDP----DGYITVVGRE 431 (536)
T ss_pred -----------CC-----CCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECC----CCcEEEeccc
Confidence 22 45689999999966 46665 599999999985 5789999999
Q ss_pred CceEeeeeeecCHHHHHHHHHH
Q 007464 429 NLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 429 ~~~i~v~Gekv~e~~v~~av~~ 450 (603)
+|+++++|+++++.+||.+|.+
T Consensus 432 ~d~i~~~G~~v~~~eiE~~l~~ 453 (536)
T PRK10946 432 KDQINRGGEKIAAEEIENLLLR 453 (536)
T ss_pred cceeecCCEEEcHHHHHHHHHh
Confidence 9999999999999999999975
No 50
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.31 E-value=2.3e-11 Score=140.63 Aligned_cols=134 Identities=18% Similarity=0.239 Sum_probs=89.8
Q ss_pred CCCceeeEEeecCh--HHHHHHHHHHhCCCCeeccccccCcccceecCC-CC--CCccccceeecCCceEEEEEeCCCCC
Q 007464 293 PNAKYLSGIMTGSM--EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS--LPPELATFAVLPNIGYFEFIPQRLGN 367 (603)
Q Consensus 293 P~L~~i~~~~~G~~--~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~-~~--~~~~~~~~~l~~~~~~~EFip~~~~~ 367 (603)
++|+ .+++||+ .....++.+.+++++++ ++||+||+..++... +. ..++.+|..+ |+. -+-+++++ +
T Consensus 386 ~~lr---~~~~Gga~l~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~-pg~-evki~d~~--~ 457 (666)
T PLN02614 386 GNVR---IILSGAAPLASHVESFLRVVACCHVL-QGYGLTESCAGTFVSLPDELDMLGTVGPPV-PNV-DIRLESVP--E 457 (666)
T ss_pred CcEE---EEEEcCCCCCHHHHHHHHHhcCCCEE-eeCchHhhhhheeeeccccCCcCCcccCcC-Cce-EEEEeeec--c
Confidence 4677 5566763 33344555667678999 999999974322211 11 1123344432 322 22333322 1
Q ss_pred cccccccCCCccccccccCCCCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecCce
Q 007464 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLL 431 (603)
Q Consensus 368 ~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~ 431 (603)
. +.. ++++|+.|||+|.. +.||| +|+|||+++++. ...+.|+||.+|+
T Consensus 458 ~-------~~~-----~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~gR~kd~ 521 (666)
T PLN02614 458 M-------EYD-----ALASTPRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQP----NGSMKIIDRKKNI 521 (666)
T ss_pred c-------Ccc-----cCCCCCCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEEEcC----CCCEEEEEcchhc
Confidence 1 112 45679999999966 57887 699999999985 6789999999999
Q ss_pred Eee-eeeecCHHHHHHHHHH
Q 007464 432 LTI-NIDKNTEKDLQLSVDE 450 (603)
Q Consensus 432 i~v-~Gekv~e~~v~~av~~ 450 (603)
|++ +|++|++.+||+++.+
T Consensus 522 ik~~~G~~V~p~eIE~~l~~ 541 (666)
T PLN02614 522 FKLSQGEYVAVENIENIYGE 541 (666)
T ss_pred eecCCCeeecHHHHHHHHhc
Confidence 996 7999999999999875
No 51
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.31 E-value=4.6e-11 Score=137.63 Aligned_cols=135 Identities=14% Similarity=0.107 Sum_probs=89.5
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC--CCCccccceeecCCceEEEEEeCCCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP--SLPPELATFAVLPNIGYFEFIPQRLGN 367 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~--~~~~~~~~~~l~~~~~~~EFip~~~~~ 367 (603)
++++ .+++||. ....+.+++.+ |++++ ++||+||+...+.... ...++..|.. .| +.-+.+++.+ +
T Consensus 376 ~~lr---~~~~gGa~l~~~~~~~~~~~~-g~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~p-~p-g~~v~i~d~~--~ 446 (651)
T PLN02736 376 GRVR---FMSSGASPLSPDVMEFLRICF-GGRVL-EGYGMTETSCVISGMDEGDNLSGHVGSP-NP-ACEVKLVDVP--E 446 (651)
T ss_pred CcEE---EEEeCCCCCCHHHHHHHHHHh-CCCeE-EEechHHhchheeccCCCCCCCCccCCc-cC-ceEEEEEEcc--c
Confidence 3677 6677763 45555666667 58888 9999999754332211 1112223332 23 2334455533 1
Q ss_pred cccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeecCc
Q 007464 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNL 430 (603)
Q Consensus 368 ~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~ 430 (603)
. .. ..+.++++.|||+|.+ +.||| +|+|||+++++. ...+.|+||.+|
T Consensus 447 ~---------~~--~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~----dG~l~i~GR~kd 511 (651)
T PLN02736 447 M---------NY--TSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLP----GGRLKIIDRKKN 511 (651)
T ss_pred c---------Cc--ccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcC----CCcEEEEEechh
Confidence 1 00 0123445578999966 57777 699999999985 678999999999
Q ss_pred eEee-eeeecCHHHHHHHHHHH
Q 007464 431 LLTI-NIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 431 ~i~v-~Gekv~e~~v~~av~~a 451 (603)
+|++ +|++|++.+||+++.+.
T Consensus 512 ~ik~~~G~~V~p~eIE~~l~~~ 533 (651)
T PLN02736 512 IFKLAQGEYIAPEKIENVYAKC 533 (651)
T ss_pred heEcCCCcEechHHHHHHHhcC
Confidence 9997 79999999999999753
No 52
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.31 E-value=5.3e-10 Score=125.62 Aligned_cols=130 Identities=13% Similarity=0.156 Sum_probs=91.6
Q ss_pred CCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCCCC---CccccceeecCCceEEEEEeCCCC
Q 007464 294 NAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSL---PPELATFAVLPNIGYFEFIPQRLG 366 (603)
Q Consensus 294 ~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~-~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~ 366 (603)
+++ ++..||. ...++.+.+.+++++++ +.||+||+.. +....... ..+..|..+ | +..+++++.+
T Consensus 291 ~lr---~i~~gg~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~-~-~~~~~i~d~~-- 362 (542)
T PRK07786 291 ALR---VLSWGAAPASDTLLRQMAATFPEAQIL-AAFGQTEMSPVTCMLLGEDAIRKLGSVGKVI-P-TVAARVVDEN-- 362 (542)
T ss_pred ceE---EEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccceEecCcccccccCCCccccC-C-CceEEEECCC--
Confidence 466 6666663 55677788888888999 9999999743 22111110 111223322 2 3455655532
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecCc
Q 007464 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNL 430 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~ 430 (603)
.+ ++..|+.|||++.+ ..||| +|+|||+++.+. ...+.++||.+|
T Consensus 363 ----------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~----~g~~~i~GR~~d 423 (542)
T PRK07786 363 ----------MN-----DVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQDE----EGYVWVVDRKKD 423 (542)
T ss_pred ----------CC-----CCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEEcC----CceEEEEecccc
Confidence 11 45679999999966 46666 499999999875 578999999999
Q ss_pred eEeeeeeecCHHHHHHHHHH
Q 007464 431 LLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 431 ~i~v~Gekv~e~~v~~av~~ 450 (603)
+++++|+++++.+||++|.+
T Consensus 424 ~i~~~G~~v~~~eiE~~l~~ 443 (542)
T PRK07786 424 MIISGGENIYCAEVENVLAS 443 (542)
T ss_pred eEEeCCEEECHHHHHHHHHh
Confidence 99999999999999999975
No 53
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.31 E-value=1.2e-10 Score=125.04 Aligned_cols=132 Identities=18% Similarity=0.238 Sum_probs=89.7
Q ss_pred CCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceec---CCCCCC----ccccceeecCCceEEEEE
Q 007464 292 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGAN---VNPSLP----PELATFAVLPNIGYFEFI 361 (603)
Q Consensus 292 WP~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~---~~~~~~----~~~~~~~l~~~~~~~EFi 361 (603)
.++++ .+..|| .....+.+++.+++++++ ..||+||+...+. ...... +...|. ..++ .....+
T Consensus 233 ~~~l~---~v~~~g~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~ 306 (408)
T TIGR01733 233 LASLR---LVILGGEALTPALVDRWRARGPGARLI-NLYGPTETTVWSTATLVDADDAPRESPVPIGR-PLAN-TRLYVL 306 (408)
T ss_pred ccCce---EEEEeCccCCHHHHHHHHHhCCCcEEE-ecccCCceEEEEEEEEcCccccCCccccccCc-ccCC-ceEEEE
Confidence 45788 555555 366667788888668898 9999999754321 111111 011221 1222 223333
Q ss_pred eCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee----------------------eceeCCEEEEecee
Q 007464 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY----------------------RYRLGDVVKVMGFH 416 (603)
Q Consensus 362 p~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~----------------------RYr~GDvvrv~g~~ 416 (603)
+.+ . ..++.|+.|||+|++ +.|+| +|+|||+++++.
T Consensus 307 ~~~------------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~-- 367 (408)
T TIGR01733 307 DDD------------L-----RPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLP-- 367 (408)
T ss_pred CCC------------C-----CCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcC--
Confidence 221 1 245679999999987 34454 699999999985
Q ss_pred CCCCEEEEEeecCceEeeeeeecCHHHHHHHHHH
Q 007464 417 NSTPELKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 417 ~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
..++.|+||.+|+++++|+++++.+|++++..
T Consensus 368 --~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~ 399 (408)
T TIGR01733 368 --DGNLEFLGRIDDQVKIRGYRIELGEIEAALLR 399 (408)
T ss_pred --CCCEEEeeccCCEEEeCeEEechHHHHHHHhc
Confidence 56899999999999999999999999999974
No 54
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.30 E-value=7.8e-10 Score=124.62 Aligned_cols=131 Identities=18% Similarity=0.174 Sum_probs=90.1
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CccccceeecCCceEEEEEeCCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRLG 366 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~ 366 (603)
++++ .+..||. ....+++++.+ +++++ +.||+||+...+...+.. .+...|..+ .+.-+++++.+
T Consensus 327 ~~l~---~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~--~g~~v~i~d~~-- 397 (557)
T PRK07059 327 SKLI---VANGGGMAVQRPVAERWLEMT-GCPIT-EGYGLSETSPVATCNPVDATEFSGTIGLPL--PSTEVSIRDDD-- 397 (557)
T ss_pred hhhe---EEEeccccCCHHHHHHHHHHh-CCCee-eccccccccchhhcCCCCCCCcCCcccCcc--CCcEEEEECCC--
Confidence 4566 6666663 45556677777 58999 999999975433222211 122233322 23345555432
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
++ .++.|+.|||+|++ +.||| +|+|||+++.+. ...+.|+||.+
T Consensus 398 ----------~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~ 458 (557)
T PRK07059 398 ----------GN-----DLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDE----RGYTKIVDRKK 458 (557)
T ss_pred ----------CC-----CCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcC----CCcEEEecccc
Confidence 12 35679999999976 23443 499999999874 57899999999
Q ss_pred ceEeeeeeecCHHHHHHHHHHH
Q 007464 430 LLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 430 ~~i~v~Gekv~e~~v~~av~~a 451 (603)
++++++|+++++.+||++|.+.
T Consensus 459 ~~i~~~G~~i~p~~iE~~l~~~ 480 (557)
T PRK07059 459 DMILVSGFNVYPNEIEEVVASH 480 (557)
T ss_pred cceEECCEEEcHHHHHHHHHhC
Confidence 9999999999999999999753
No 55
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=99.30 E-value=2.2e-11 Score=137.54 Aligned_cols=133 Identities=21% Similarity=0.312 Sum_probs=95.5
Q ss_pred CCceeeEEeecChHHHHHHHH--HHhCCCCeeccccccCcccceecCCCCCCccccceeecCCceEEEEEeCCCCCcccc
Q 007464 294 NAKYLSGIMTGSMEHYLKKLR--HYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ 371 (603)
Q Consensus 294 ~L~~i~~~~~G~~~~y~~~l~--~~~gg~~i~~~~YgaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~ 371 (603)
+++ ...+||++.-.+.+. +.. |+++. ++||+||...+++.++.. .|.+.
T Consensus 354 ri~---~~~sGGa~l~~~~~~f~~~l-Gi~i~-eGYGlTEts~~~~v~~~~----------------~~~~g-------- 404 (613)
T COG1022 354 RIR---YALSGGAPLSPELLHFFRSL-GIPIL-EGYGLTETSAVVSVNPPD----------------RFVLG-------- 404 (613)
T ss_pred cEE---EEEecCCcCCHHHHHHHHHc-CCCeE-EEecccccccceEEcccc----------------CcccC--------
Confidence 466 667787533333232 234 59999 999999987666544211 11111
Q ss_pred cccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeecCceEee
Q 007464 372 VLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTI 434 (603)
Q Consensus 372 ~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v 434 (603)
.-+++++-.|++.++.|||.|.+ +.||| ||+|||++.++. ...+.++||.+++++.
T Consensus 405 ---tvG~p~p~~evKI~d~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~----~g~L~i~gRkK~~i~l 477 (613)
T COG1022 405 ---TVGKPLPGIEVKIADDGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDE----DGYLVITGRKKELIKL 477 (613)
T ss_pred ---CcCCcCCCceEEEccCceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcC----CCcEEEeecccceEEC
Confidence 13566666788999999999977 69999 799999999996 6899999999999765
Q ss_pred -eeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeec
Q 007464 435 -NIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD 470 (603)
Q Consensus 435 -~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~ 470 (603)
+||+|.+..+|..+.+. --+...+++.+
T Consensus 478 ~~GknIaP~~IE~~l~~~--------~~I~qi~vvg~ 506 (613)
T COG1022 478 SNGKNIAPEPIESKLAKS--------PLIEQICVVGD 506 (613)
T ss_pred CCCcccChHHHHHHHhcC--------CCeeEEEEEec
Confidence 68999999999977642 23445566654
No 56
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.30 E-value=6.6e-10 Score=124.53 Aligned_cols=63 Identities=17% Similarity=0.171 Sum_probs=54.5
Q ss_pred ccCCCCeEEEEEcc---cccee---------eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 384 EVKVGEEYEIIVTN---VAGLY---------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 384 eve~G~~yELVvTt---~~GL~---------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
+|+.|+.|||+|++ +.||| +|+|||+++.+ ...+.|+||.+|+|+++|++|++.+||++|.+.
T Consensus 366 ~~~~g~~GEl~v~g~~~~~GY~~~~~~~~~~~~~TGDl~~~~-----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~ 440 (525)
T PRK05851 366 GVAGREIGEIEIRGASMMSGYLGQAPIDPDDWFPTGDLGYLV-----DGGLVVCGRAKELITVAGRNIFPTEIERVAAQV 440 (525)
T ss_pred cCCCCCeEEEEEecCchhhccccCCccCCCCceeccceEEEE-----CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhC
Confidence 36789999999976 45676 69999999874 357999999999999999999999999999864
No 57
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.30 E-value=7.1e-10 Score=124.54 Aligned_cols=128 Identities=14% Similarity=0.174 Sum_probs=86.0
Q ss_pred CCceeeEEeecC-hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCccccceeecCCceEEEEEeCCCCCccccc
Q 007464 294 NAKYLSGIMTGS-MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV 372 (603)
Q Consensus 294 ~L~~i~~~~~G~-~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~ 372 (603)
.++ ++.+|. ..+-..++.+.+ |++++ +.||+||+.+.+...+..+++..+.. .++ ++++..+ . +
T Consensus 268 ~lr---~~~gg~~~~~~~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~g~~-~~~---~~i~~~~--~-~--- 332 (529)
T PRK07867 268 PLR---IVYGNEGAPGDIARFARRF-GCVVV-DGFGSTEGGVAITRTPDTPPGALGPL-PPG---VAIVDPD--T-G--- 332 (529)
T ss_pred ceE---EEecCCCChHHHHHHHHHh-CCcEE-EeecccccccccccCCCCCCCCcCCC-CCC---EEEEECC--C-C---
Confidence 456 334333 344455666677 58998 99999997544432222222223332 232 6666543 1 1
Q ss_pred ccCCCccccccccCCCC------------eEEEEE-cc---cccee-------------eceeCCEEEEeceeCCCCEEE
Q 007464 373 LCIEPKPVGLTEVKVGE------------EYEIIV-TN---VAGLY-------------RYRLGDVVKVMGFHNSTPELK 423 (603)
Q Consensus 373 ~~~~~~~v~l~eve~G~------------~yELVv-Tt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~ 423 (603)
. ++..|+ .|||++ .. +.|+| ||+|||+++++. ...+.
T Consensus 333 -----~-----~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~ 398 (529)
T PRK07867 333 -----T-----ECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDA----DGYAY 398 (529)
T ss_pred -----C-----CCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEeC----CCcEE
Confidence 1 123333 899998 43 46666 899999999875 57899
Q ss_pred EEeecCceEeeeeeecCHHHHHHHHHH
Q 007464 424 FICRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 424 f~gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
|+||.+|+++++|+|+++.+||++|.+
T Consensus 399 ~~GR~~d~i~~~G~~v~p~eIE~~l~~ 425 (529)
T PRK07867 399 FAGRLGDWMRVDGENLGTAPIERILLR 425 (529)
T ss_pred EeccccCeEEECCEEeCHHHHHHHHHh
Confidence 999999999999999999999999975
No 58
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.30 E-value=5.5e-10 Score=128.09 Aligned_cols=63 Identities=27% Similarity=0.287 Sum_probs=54.6
Q ss_pred ccCCCCeEEEEEcc---cccee-------------------------------eceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 384 EVKVGEEYEIIVTN---VAGLY-------------------------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 384 eve~G~~yELVvTt---~~GL~-------------------------------RYr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
+++.|+.|||+|.. +.||| +|||||+++.. ...+.|+||.+
T Consensus 412 ~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-----dG~l~i~GR~~ 486 (631)
T PRK07769 412 ELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-----DGELYITGRVK 486 (631)
T ss_pred CCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-----CCEEEEEcccc
Confidence 56789999999976 34544 69999999884 47899999999
Q ss_pred ceEeeeeeecCHHHHHHHHHHH
Q 007464 430 LLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 430 ~~i~v~Gekv~e~~v~~av~~a 451 (603)
|+|+++|++|++.|||.+|.+.
T Consensus 487 d~Ik~~G~~V~p~eIE~~l~~~ 508 (631)
T PRK07769 487 DLVIIDGRNHYPQDLEYTAQEA 508 (631)
T ss_pred cEEEECCeeeCHHHHHHHHHhc
Confidence 9999999999999999999864
No 59
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.29 E-value=1.4e-09 Score=122.99 Aligned_cols=130 Identities=16% Similarity=0.238 Sum_probs=88.5
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCccccceeecCCceEEEEEeCCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 366 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~---~~~~~~~~~l~~~~~~~EFip~~~~ 366 (603)
++++ .+.+||. ....+.+++.+ +++++ +.||+||+.......+. ..++..|..+ ++ .-+++++.+
T Consensus 333 ~~lr---~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~-~~-~~v~ivd~~-- 403 (562)
T PRK12492 333 SALK---LTNSGGTALVKATAERWEQLT-GCTIV-EGYGLTETSPVASTNPYGELARLGTVGIPV-PG-TALKVIDDD-- 403 (562)
T ss_pred ccee---EEEeccccCCHHHHHHHHHHh-CCcee-eccCccccCceeeecCCcccccCCccceec-CC-CEEEEECCC--
Confidence 4677 5666663 44555666667 58998 99999997432211111 1112233322 22 223444321
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
+. .+.+|+.|||+|++ +.||| +|+|||+++++. ...+.|+||.+
T Consensus 404 ----------~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~----~G~l~i~GR~~ 464 (562)
T PRK12492 404 ----------GN-----ELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDP----DGFVRIVDRKK 464 (562)
T ss_pred ----------CC-----CCCCCCceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECC----CCeEEEecccC
Confidence 12 35679999999976 34555 599999999985 57899999999
Q ss_pred ceEeeeeeecCHHHHHHHHHH
Q 007464 430 LLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 430 ~~i~v~Gekv~e~~v~~av~~ 450 (603)
+++++.|+++++.+|++++.+
T Consensus 465 ~~i~~~G~~i~~~eIE~~l~~ 485 (562)
T PRK12492 465 DLIIVSGFNVYPNEIEDVVMA 485 (562)
T ss_pred CeEEECCEEECHHHHHHHHHh
Confidence 999999999999999999874
No 60
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.29 E-value=1.5e-09 Score=121.85 Aligned_cols=129 Identities=9% Similarity=0.044 Sum_probs=82.8
Q ss_pred ccCCCCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHH
Q 007464 384 EVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLS 447 (603)
Q Consensus 384 eve~G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~a 447 (603)
.+++|+.|||++++ ..|+| +|+|||+++++. ...+.|+||.+|+++++|+++++.+||++
T Consensus 380 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eiE~~ 455 (545)
T PRK07768 380 VLPPRGVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTE----EGEVVVCGRVKDVIIMAGRNIYPTDIERA 455 (545)
T ss_pred CCCCCCEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEec----CCEEEEEccccceEEECCEecCHHHHHHH
Confidence 35679999999976 34554 599999999974 56899999999999999999999999999
Q ss_pred HHHHHHHhhhcCCeeEeeEEe---ecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHHhccChhhHHHhhcCCcCCeEEE
Q 007464 448 VDEAAQLLAEEKQEVVDFTSH---VDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSFVDAGYVSARKVNAIGPLELR 524 (603)
Q Consensus 448 v~~a~~~l~~~g~~l~~f~~~---~~~~~~~~hy~l~vE~~~~~~~~~l~~~~~~ld~~L~n~~Y~~~R~~g~l~p~~v~ 524 (603)
|.+. . ++ .+..++ .+.........+++|.....+...+.++...+.+.+ +..-...|-.|.
T Consensus 456 l~~~-~-----~v--~~~~vv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l--------~~~~~~~p~~v~ 519 (545)
T PRK07768 456 AARV-E-----GV--RPGNAVAVRLDAGHSREGFAVAVESNAFEDPAEVRRIRHQVAHEV--------VAEVGVRPRNVV 519 (545)
T ss_pred HHhC-c-----cc--ccceEEEEEecCCCCceEEEEEEEecccccHHHHHHHHHHHHHHH--------HHHhCCCccEEE
Confidence 9864 2 21 122111 111111224566777643333333344444444332 111125667788
Q ss_pred EeccChHH
Q 007464 525 VVLKGTFQ 532 (603)
Q Consensus 525 ~v~~GtF~ 532 (603)
+++.+.|.
T Consensus 520 ~v~~~~lP 527 (545)
T PRK07768 520 VLGPGSIP 527 (545)
T ss_pred EeCCCcCC
Confidence 88866654
No 61
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.29 E-value=1.1e-09 Score=123.59 Aligned_cols=131 Identities=18% Similarity=0.191 Sum_probs=90.3
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCccccceeecCCceEEEEEeCCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 366 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~---~~~~~~~~~l~~~~~~~EFip~~~~ 366 (603)
|+++ ++..||. ....+++++.+ |++++ +.||+||+...+..... ..++..++. .| +.-+++++.+
T Consensus 325 ~~lr---~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~~-~~~~~i~~~~-- 395 (560)
T PRK08974 325 SSLK---LSVGGGMAVQQAVAERWVKLT-GQYLL-EGYGLTECSPLVSVNPYDLDYYSGSIGLP-VP-STEIKLVDDD-- 395 (560)
T ss_pred ccee---EEEecCccCCHHHHHHHHHHh-CCcEE-eeecccccCceeeccCCCCcccCCccccC-cC-CCEEEEECCC--
Confidence 5677 6666763 44455666666 68999 99999997543322111 111223332 22 2345555432
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecCc
Q 007464 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNL 430 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~ 430 (603)
+ .++..|+.|||+|++ ..|+| +|+|||+++.+. ...+.|+||.+|
T Consensus 396 ----------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d 456 (560)
T PRK08974 396 ----------G-----NEVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDE----EGFLRIVDRKKD 456 (560)
T ss_pred ----------C-----CCCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcC----CceEEEEecccc
Confidence 1 245789999999976 35555 399999999874 578999999999
Q ss_pred eEeeeeeecCHHHHHHHHHHH
Q 007464 431 LLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 431 ~i~v~Gekv~e~~v~~av~~a 451 (603)
++++.|+++++.+||++|.+.
T Consensus 457 ~i~~~G~~i~~~~IE~~l~~~ 477 (560)
T PRK08974 457 MILVSGFNVYPNEIEDVVMLH 477 (560)
T ss_pred eEEeCCEEECHHHHHHHHHhC
Confidence 999999999999999999753
No 62
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.29 E-value=1e-09 Score=121.70 Aligned_cols=132 Identities=19% Similarity=0.271 Sum_probs=89.0
Q ss_pred CCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CccccceeecCCceEEEEEeCCCC
Q 007464 293 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRLG 366 (603)
Q Consensus 293 P~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~ 366 (603)
++++ .+.+|| .....+.+++.+++++++ +.||+||+.......+.. .++..|.. .| +..+.+++.+
T Consensus 274 ~~l~---~~~~~g~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~-~~-~~~~~i~~~~-- 345 (515)
T TIGR03098 274 PSLR---YLTNSGGAMPRATLSRLRSFLPNARLF-LMYGLTEAFRSTYLPPEEVDRRPDSIGKA-IP-NAEVLVLRED-- 345 (515)
T ss_pred cceE---EEEecCCcCCHHHHHHHHHHCCCCeEe-eeeccccccceEecccccccCCCCCccee-cC-CCEEEEECCC--
Confidence 4667 556555 355666777778778888 999999985433222211 11223332 22 2234444321
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------------------eceeCCEEEEeceeCC
Q 007464 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------------------RYRLGDVVKVMGFHNS 418 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-------------------------RYr~GDvvrv~g~~~~ 418 (603)
++ .+..|+.|||++.+ +.|+| +|+|||++++..
T Consensus 346 ----------~~-----~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~---- 406 (515)
T TIGR03098 346 ----------GS-----ECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDE---- 406 (515)
T ss_pred ----------CC-----CCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcC----
Confidence 12 34568899999966 34444 488999999874
Q ss_pred CCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 419 TPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 419 ~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
...+.+.||.+|+++++|+++++.+||+++.+.
T Consensus 407 ~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~ 439 (515)
T TIGR03098 407 EGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYAT 439 (515)
T ss_pred CceEEEEeccccceecCCEEeCHHHHHHHHhcC
Confidence 568999999999999999999999999999753
No 63
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.29 E-value=4.5e-10 Score=125.52 Aligned_cols=132 Identities=16% Similarity=0.089 Sum_probs=87.5
Q ss_pred cCCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC----------CCCccccceeecCCceE
Q 007464 291 LFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP----------SLPPELATFAVLPNIGY 357 (603)
Q Consensus 291 lWP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~----------~~~~~~~~~~l~~~~~~ 357 (603)
..++++ .++.||. .....++.+.+ +.++. +.||+||+...+...+ ....+..|.. .+ +.-
T Consensus 278 ~~~~lr---~~~~gG~~l~~~~~~~~~~~~-g~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~-~~-g~~ 350 (528)
T PRK07470 278 DHSSLR---YVIYAGAPMYRADQKRALAKL-GKVLV-QYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFE-RT-GME 350 (528)
T ss_pred CCcceE---EEEEcCCCCCHHHHHHHHHHh-CcHHH-HhCCCcccCCceeecchhhccccccccceeeccCcc-cC-CcE
Confidence 356788 5666663 44455566667 46777 9999999643222111 0001112221 12 222
Q ss_pred EEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCE
Q 007464 358 FEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPE 421 (603)
Q Consensus 358 ~EFip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~ 421 (603)
++.++.+ + .+++.|+.|||+|++ ..||| +|+|||+++++. ...
T Consensus 351 ~~i~d~~------------~-----~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~ 409 (528)
T PRK07470 351 VQIQDDE------------G-----RELPPGETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTGDLGHLDA----RGF 409 (528)
T ss_pred EEEECCC------------C-----CCCCCCCceEEEEeCCccchhhcCCHHHHHhhhcCCcEecceeEEEcc----CCe
Confidence 3333321 1 245679999999976 35555 499999999885 678
Q ss_pred EEEEeecCceEeeeeeecCHHHHHHHHHH
Q 007464 422 LKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 422 i~f~gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
+.+.||.+|++++.|+++++.+||++|..
T Consensus 410 l~~~GR~dd~i~~~G~~v~~~~IE~~l~~ 438 (528)
T PRK07470 410 LYITGRASDMYISGGSNVYPREIEEKLLT 438 (528)
T ss_pred EEEeCCccceEEeCCEEECHHHHHHHHHh
Confidence 99999999999999999999999999975
No 64
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.29 E-value=4.1e-10 Score=125.48 Aligned_cols=131 Identities=12% Similarity=0.115 Sum_probs=92.2
Q ss_pred cCCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC--CccccceeecCCceEEEEEeCCC
Q 007464 291 LFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL--PPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 291 lWP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~--~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
-.+.|+ .+.+.|- ..-...+.+.+| +++. +.||.||+..+. ..+.. .++..+.. +|. .-.+.++.+
T Consensus 288 dlssLr---~~~SaGEPLnpe~~~w~~~~~g-~~i~-d~~gqTEtg~~~-~~~~~~~~~g~~g~p-~pG-~~~~vvdd~- 358 (528)
T COG0365 288 DLSSLR---VLGSAGEPLNPEAFEWFYSALG-VWIL-DIYGQTETGMGF-IAGRPPVKNGSSGLP-LPG-YAVRRVDDE- 358 (528)
T ss_pred cchhhe---eeeccCCCCCHHHHHHHHHHhC-CCEe-ccccccccCccc-cCCCCCcCCCCCCCC-CCC-ceeEEECCC-
Confidence 456788 6666663 555566777784 9999 999999976211 11111 12222332 232 234555432
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEccc-----cceee-------------ceeCCEEEEeceeCCCCEEEEEee
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV-----AGLYR-------------YRLGDVVKVMGFHNSTPELKFICR 427 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~-----~GL~R-------------Yr~GDvvrv~g~~~~~P~i~f~gR 427 (603)
+ + ++++|+ |+|+|... .|+|+ |.|||.+..+. ...|.|+||
T Consensus 359 ---g--------~-----~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~De----dGy~~i~GR 417 (528)
T COG0365 359 ---G--------N-----PVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERDE----DGYFWLHGR 417 (528)
T ss_pred ---C--------C-----cCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCceeEEcc----CCCEEEEee
Confidence 2 2 456788 99999753 44664 99999999996 799999999
Q ss_pred cCceEeeeeeecCHHHHHHHHHHH
Q 007464 428 RNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 428 ~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
.+|+||+.|..|...|||++|.+.
T Consensus 418 ~DDvI~vsG~Rig~~EvE~~l~~h 441 (528)
T COG0365 418 SDDVIKVSGKRIGPLEIESVLLAH 441 (528)
T ss_pred ccceEeccCeeccHHHHHHHHHhC
Confidence 999999999999999999999864
No 65
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.28 E-value=7.8e-10 Score=123.75 Aligned_cols=132 Identities=14% Similarity=0.147 Sum_probs=89.5
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CccccceeecCCceEEEEEeCCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRLG 366 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~ 366 (603)
++++ +++.||. .....++++.+ +++++ +.||+||+.+........ ..+..|..+.+ +...++++.+
T Consensus 299 ~~lr---~~~~gG~~l~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~-~~~v~i~d~~-- 370 (527)
T TIGR02275 299 SSLK---LLQVGGAKFSEAAARRVPAVF-GCQLQ-QVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSP-DDEVRVVDDH-- 370 (527)
T ss_pred cceE---EEEEcCCCCCHHHHHHHHHHh-CCeEE-eeeccCccCccccCCCCccccccccCCCCCCC-CceEEEECCC--
Confidence 4677 6777773 55556677777 58998 999999975432211100 01113333212 2233333321
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
++ .++.|+.+||+|++ +.||| +|+|||+++++. .+.+.|+||.+
T Consensus 371 ----------g~-----~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~~~gR~~ 431 (527)
T TIGR02275 371 ----------GN-----PVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTP----EGYIVVVGRAK 431 (527)
T ss_pred ----------CC-----CCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcC----CccEEEEeccc
Confidence 12 34679999999975 45555 599999999975 67899999999
Q ss_pred ceEeeeeeecCHHHHHHHHHHH
Q 007464 430 LLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 430 ~~i~v~Gekv~e~~v~~av~~a 451 (603)
|+++++|+++++.+||++|.+.
T Consensus 432 d~i~~~G~~v~~~eiE~~l~~~ 453 (527)
T TIGR02275 432 DQINRGGEKIAAEEIENLLLAH 453 (527)
T ss_pred ceeecCCEEECHHHHHHHHHhC
Confidence 9999999999999999998753
No 66
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.28 E-value=5e-11 Score=138.57 Aligned_cols=134 Identities=14% Similarity=0.175 Sum_probs=87.7
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCC-CC-CCccccceeecCCceEEEEEeCCCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS-LPPELATFAVLPNIGYFEFIPQRLGN 367 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~-~~-~~~~~~~~~l~~~~~~~EFip~~~~~ 367 (603)
++++ .+++||+ ....+.++..+ |++++ ++||+||+..+.... +. ...+.+|.. .| +.-+..++.+ +
T Consensus 420 ~~lr---~i~~GGapl~~~~~~~~~~~~-g~~v~-~~YG~TEt~~~~~~~~~~~~~~gsvG~p-~p-~~evkivd~~--~ 490 (696)
T PLN02387 420 GRIR---FMLSGGAPLSGDTQRFINICL-GAPIG-QGYGLTETCAGATFSEWDDTSVGRVGPP-LP-CCYVKLVSWE--E 490 (696)
T ss_pred CcEE---EEEEcCCCCCHHHHHHHHHHc-CCCee-EeechhhcccceeecCcccCCCCccCCC-CC-ceEEEEeecc--c
Confidence 4677 6777774 33333444456 58999 999999975433221 11 112233332 22 2345555533 1
Q ss_pred cccccccCCCccccccccCCCCeEEEEEcc---cccee------------------eceeCCEEEEeceeCCCCEEEEEe
Q 007464 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY------------------RYRLGDVVKVMGFHNSTPELKFIC 426 (603)
Q Consensus 368 ~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~------------------RYr~GDvvrv~g~~~~~P~i~f~g 426 (603)
.+ ..+.. +++..|||+|.. +.||| ||+|||+++++. ...+.|+|
T Consensus 491 ~~--------~~~~~---~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~----dG~l~i~g 555 (696)
T PLN02387 491 GG--------YLISD---KPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHP----DGCLEIID 555 (696)
T ss_pred cC--------cccCC---CCCCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEECC----CCcEEEEE
Confidence 11 11111 234568999966 57776 799999999985 68999999
Q ss_pred ecCceEee-eeeecCHHHHHHHHHH
Q 007464 427 RRNLLLTI-NIDKNTEKDLQLSVDE 450 (603)
Q Consensus 427 R~~~~i~v-~Gekv~e~~v~~av~~ 450 (603)
|.+|++++ +||+|++.+||+++.+
T Consensus 556 R~kd~ik~~~Ge~I~p~eIE~~l~~ 580 (696)
T PLN02387 556 RKKDIVKLQHGEYVSLGKVEAALSV 580 (696)
T ss_pred cccceEECCCCeEEchHHHHHHHhc
Confidence 99999998 6999999999999875
No 67
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.28 E-value=8.8e-10 Score=127.18 Aligned_cols=222 Identities=15% Similarity=0.129 Sum_probs=123.2
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhC-CCCeeccccccCcccceec-CCCCCC--ccccceeecCCceEEEEEeCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAG-DLPLMSADYGSSEGWIGAN-VNPSLP--PELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~g-g~~i~~~~YgaSEg~~~i~-~~~~~~--~~~~~~~l~~~~~~~EFip~~~ 365 (603)
++|+ .+++||. ....+.+.+.++ ++.+. ..||+||....+. ..+..+ .+..+.. .|+ +|..-.+
T Consensus 384 ~sLr---~i~~gGe~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~p-~~g---~~v~ivd- 454 (652)
T TIGR01217 384 SALQ---CVASTGSPLPPDGFRWVYDEIKADVWLA-SISGGTDICSCFAGANPTLPVHIGEIQAP-GLG---TAVQSWD- 454 (652)
T ss_pred hhee---EEEeecCCCCHHHHHHHHHHhCCCceEE-eccCHHHHhccccCCCCCCCCcCCccCCC-cCC---CceEEEC-
Confidence 5677 6677763 444455655564 34555 8899999522111 111111 1111111 121 2322223
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEccc-----ccee------------------eceeCCEEEEeceeCCCCEE
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV-----AGLY------------------RYRLGDVVKVMGFHNSTPEL 422 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~-----~GL~------------------RYr~GDvvrv~g~~~~~P~i 422 (603)
++ ++ ++ +|+.|||+++.- .||| .|++||+++++. ...+
T Consensus 455 -~~--------g~-----~~-~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~----dG~l 515 (652)
T TIGR01217 455 -PE--------GK-----PV-TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTP----RGGI 515 (652)
T ss_pred -CC--------CC-----CC-CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECC----CCcE
Confidence 11 22 23 489999999762 4554 178999999985 6789
Q ss_pred EEEeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEe--ecCCCCCceEEEEEEeccC--CCHHHHHHHHH
Q 007464 423 KFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSH--VDLSTDPGHYVIFWEVSGE--VNDEVLKECCN 498 (603)
Q Consensus 423 ~f~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~--~~~~~~~~hy~l~vE~~~~--~~~~~l~~~~~ 498 (603)
.|+||.+|+|+++|++|++.|||++|.+. .+ +.+-.++ ++.. ..-.-+.||.+..+ .+.+..+++.+
T Consensus 516 ~i~GR~dd~I~~~G~ri~p~EIE~~l~~~------p~--V~eaavvg~~~~~-~ge~~~afVv~~~~~~~~~~~~~~l~~ 586 (652)
T TIGR01217 516 VIHGRSDSTLNPQGVRMGSAEIYNAVERL------DE--VRESLCIGQEQPD-GGYRVVLFVHLAPGATLDDALLDRIKR 586 (652)
T ss_pred EEEecccCeEecCCEEcCHHHHHHHHHhC------CC--cceEEEEeeecCC-CCEEEEEEEEECCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999864 12 2343332 2211 11233467776533 22222233433
Q ss_pred HHHHhccChhhHHHhhcCCcCCeEEEEec------cChHHH-HHHHHhcCCCCCCCCCcCcccCCCCHHHHHHHhc
Q 007464 499 CLDRSFVDAGYVSARKVNAIGPLELRVVL------KGTFQQ-ILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCN 567 (603)
Q Consensus 499 ~ld~~L~n~~Y~~~R~~g~l~p~~v~~v~------~GtF~~-~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~ 567 (603)
.+.+.| ...-.|-.|.+|+ .|-..+ .++. +.+|. .++.+.-+. |++.++.+.+
T Consensus 587 ~~~~~l----------~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~-~~~~~---~~~~~~~~~--~~~~l~~~~~ 646 (652)
T TIGR01217 587 TIRAGL----------SPRHVPDEIIEVPGIPHTLTGKRVEVAVKR-VLQGT---PVDNPGAID--NPELLDLYEE 646 (652)
T ss_pred HHHhhC----------CCCcCCCEEEECCCCCCCCCccChHHHHHH-HHcCC---CCCCccccc--CHHHHHHHHH
Confidence 343333 1123455666653 233222 2221 12343 456677777 8999988854
No 68
>PRK08315 AMP-binding domain protein; Validated
Probab=99.27 E-value=1.3e-09 Score=122.47 Aligned_cols=134 Identities=10% Similarity=0.073 Sum_probs=89.9
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC-----CccccceeecCCceEEEEEeC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL-----PPELATFAVLPNIGYFEFIPQ 363 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~-----~~~~~~~~l~~~~~~~EFip~ 363 (603)
.++++ +++.||. ....+.+.+.++..+++ +.||+||+.......... .....|..+ | +.-++.++.
T Consensus 314 ~~~lr---~~~~~G~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~-~-~~~v~i~d~ 387 (559)
T PRK08315 314 LSSLR---TGIMAGSPCPIEVMKRVIDKMHMSEVT-IAYGMTETSPVSTQTRTDDPLEKRVTTVGRAL-P-HLEVKIVDP 387 (559)
T ss_pred chhhh---eeEecCCCCCHHHHHHHHHHcCCccee-EEEcccccccceeecCcccchhhccCCCCccC-C-CcEEEEEcC
Confidence 36777 5555652 44556677777655688 999999985433211110 011133322 2 334555543
Q ss_pred CCCCcccccccCCCccccccccCCCCeEEEEEccc---ccee--------------eceeCCEEEEeceeCCCCEEEEEe
Q 007464 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFIC 426 (603)
Q Consensus 364 ~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~---~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~g 426 (603)
+ +++ .+..|+.|||+|.+. .||| +|+|||+++.+. ...+.|+|
T Consensus 388 ~-----------~~~-----~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~G 447 (559)
T PRK08315 388 E-----------TGE-----TVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDE----EGYVNIVG 447 (559)
T ss_pred c-----------cCC-----cCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcC----CceEEEEe
Confidence 2 122 356799999999663 4444 699999999874 57899999
Q ss_pred ecCceEeeeeeecCHHHHHHHHHHH
Q 007464 427 RRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 427 R~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
|.++++++.|++++..+||+++.+.
T Consensus 448 R~d~~i~~~G~~v~~~eIE~~l~~~ 472 (559)
T PRK08315 448 RIKDMIIRGGENIYPREIEEFLYTH 472 (559)
T ss_pred eccceEEECCEEEcHHHHHHHHHhC
Confidence 9999999999999999999999753
No 69
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.27 E-value=1.2e-09 Score=121.86 Aligned_cols=131 Identities=15% Similarity=0.128 Sum_probs=90.6
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CccccceeecCCceEEEEEeCCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
+|+++ .+++||. ...++++.+.+ +++++ +.||+||+.......+.. .++..|.. .| +.-+++++.+
T Consensus 291 ~~~lr---~i~~gG~~l~~~~~~~~~~~~-g~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~~-~~~~~i~d~~- 362 (516)
T PRK13383 291 LPQLR---VVMSSGDRLDPTLGQRFMDTY-GDILY-NGYGSTEVGIGALATPADLRDAPETVGKP-VA-GCPVRILDRN- 362 (516)
T ss_pred CCceE---EEEECCCCCCHHHHHHHHHHc-Cchhh-hcccccccccceeccccccccCCCcccCC-CC-CcEEEEECCC-
Confidence 46777 6676763 55666777778 47888 999999975432211111 11122322 22 2235555432
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee----------eceeCCEEEEeceeCCCCEEEEEeecCceE
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY----------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 432 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~----------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i 432 (603)
++ ++.+|+.|||+|++ +.||+ +|+|||+++.+. ...+.++||.++++
T Consensus 363 -----------~~-----~~~~g~~Gel~v~g~~~~~~Y~~~~~~~~~~g~~~TGDl~~~d~----~G~l~i~GR~~~~i 422 (516)
T PRK13383 363 -----------NR-----PVGPRVTGRIFVGGELAGTRYTDGGGKAVVDGMTSTGDMGYLDN----AGRLFIVGREDDMI 422 (516)
T ss_pred -----------CC-----CCCCCCceEEEEecCcccccccCCchhheecCceecceeEEEcC----CccEEEeccccceE
Confidence 12 34679999999976 35565 688999999985 57899999999999
Q ss_pred eeeeeecCHHHHHHHHHH
Q 007464 433 TINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 433 ~v~Gekv~e~~v~~av~~ 450 (603)
+++|+++++.+|+++|.+
T Consensus 423 ~~~G~~v~~~eiE~~l~~ 440 (516)
T PRK13383 423 ISGGENVYPRAVENALAA 440 (516)
T ss_pred EECCEEECHHHHHHHHHh
Confidence 999999999999999975
No 70
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.27 E-value=4.7e-10 Score=138.62 Aligned_cols=131 Identities=17% Similarity=0.306 Sum_probs=89.4
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCCC---------ccccceeecCCceEEEE
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP---------PELATFAVLPNIGYFEF 360 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~~---------~~~~~~~l~~~~~~~EF 360 (603)
++++ .++.||. ....+++++.+ +++++ +.||+||+.+.....+.++ +...|..+ ++.. +..
T Consensus 717 ~~lr---~i~~gGe~l~~~~~~~~~~~~-~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~-~~~~-~~i 789 (1296)
T PRK10252 717 ASLR---QVFCSGEALPADLCREWQQLT-GAPLH-NLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPV-WNTG-LRI 789 (1296)
T ss_pred CCcc---EEEEecCCCCHHHHHHHHhcC-CCEEE-eCCCcchhhheeeeeecccccccccCCCCCCccccc-CCCE-EEE
Confidence 5688 6666662 45556666666 58898 9999999865433222111 00123322 2322 222
Q ss_pred EeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------------eceeCCEEEEeceeC
Q 007464 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------------RYRLGDVVKVMGFHN 417 (603)
Q Consensus 361 ip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------------RYr~GDvvrv~g~~~ 417 (603)
++.+ .+ .++.|+.|||+|+. ..||+ .|+|||+++.+.
T Consensus 790 ~d~~------------~~-----~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~--- 849 (1296)
T PRK10252 790 LDAR------------MR-----PVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLD--- 849 (1296)
T ss_pred ECCC------------CC-----CCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcC---
Confidence 3211 12 45789999999987 34544 599999999985
Q ss_pred CCCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 418 STPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 418 ~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
...+.|+||.+++++++|++|...|||.+|.+.
T Consensus 850 -~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~ 882 (1296)
T PRK10252 850 -DGAVEYLGRSDDQLKIRGQRIELGEIDRAMQAL 882 (1296)
T ss_pred -CCcEEEecccCCeEEEeeEEecHHHHHHHHHhC
Confidence 678999999999999999999999999999864
No 71
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.26 E-value=9.8e-11 Score=145.77 Aligned_cols=135 Identities=16% Similarity=0.181 Sum_probs=89.3
Q ss_pred CCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCC---CCC-c---------cccceeecCCc
Q 007464 292 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP---SLP-P---------ELATFAVLPNI 355 (603)
Q Consensus 292 WP~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~---~~~-~---------~~~~~~l~~~~ 355 (603)
+|.|+ .++.|| ......++++++++++++ +.||+||+.+...... ... . ...|.. .++.
T Consensus 528 ~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~-~~~~ 602 (1389)
T TIGR03443 528 IPSLH---HAFFVGDILTKRDCLRLQTLAENVCIV-NMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKG-MKNV 602 (1389)
T ss_pred CCCcc---EEEEecccCCHHHHHHHHHhCCCCEEE-ECccCCccceeEEEEEccccccccchhhcccCcCcCCCc-cCCC
Confidence 57788 555555 244556677777789999 9999999854332110 000 0 001111 1111
Q ss_pred eEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee------------------------------
Q 007464 356 GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY------------------------------ 402 (603)
Q Consensus 356 ~~~EFip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~------------------------------ 402 (603)
-+..++.+ + .. ..+..|+.|||+|.. ..|||
T Consensus 603 -~~~ivd~~----~------~~-----~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~ 666 (1389)
T TIGR03443 603 -QLLVVNRN----D------RT-----QTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNK 666 (1389)
T ss_pred -EEEEECCc----c------CC-----CcCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCccccccccccccc
Confidence 11122211 0 11 235789999999966 35555
Q ss_pred ------------eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 403 ------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 403 ------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
+|+|||+++... ...+.|+||.+|+|+++|++|.+.|||.+|.+.
T Consensus 667 ~~~~~~~~~~~~~y~TGDlg~~~~----dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~~ 723 (1389)
T TIGR03443 667 PEREFWLGPRDRLYRTGDLGRYLP----DGNVECCGRADDQVKIRGFRIELGEIDTHLSQH 723 (1389)
T ss_pred ccccccCCCccceeecCCceeEcC----CCCEEEecccCCEEEeCcEEecHHHHHHHHHhC
Confidence 599999999885 678999999999999999999999999999863
No 72
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.26 E-value=3.1e-10 Score=126.95 Aligned_cols=133 Identities=14% Similarity=0.169 Sum_probs=96.3
Q ss_pred CCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCccc--ceecCCCCC-CccccceeecCCceEEEEEeCCC
Q 007464 292 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGW--IGANVNPSL-PPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 292 WP~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaSEg~--~~i~~~~~~-~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
.|+++ .+.+|| .....+++++.+|...+. .+||+||.. +.++.+... .++.+|..+ + + .+.+-.+
T Consensus 298 l~sl~---~v~~gga~~~~~~~~~~~~~l~~~~v~-q~YGmTE~~~~~~~~~~~~e~k~~svG~~~-~-g--~~~~v~~- 368 (537)
T KOG1176|consen 298 LSSLR---SVLSGGAPLSPATLEKVKERLPNVTVI-QGYGMTEAGGLITSNDWGPERKPGSVGRLL-P-G--VRVKVLD- 368 (537)
T ss_pred CCccE---EEEecCCCCCHHHHHHHHHhCCCceEE-EeeccccccCceeecCCCccCcccccCccc-c-c--eEEEeeC-
Confidence 45677 443444 366677788889756777 999999974 455555442 355566644 3 2 2222222
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeec
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~ 428 (603)
+. +. ++.+++.|||++.+ ..||| ||+|||++-++. ...+.|++|.
T Consensus 369 -e~--------g~-----~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~----DG~l~IvdR~ 430 (537)
T KOG1176|consen 369 -ET--------GV-----SLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDE----DGYLYIVDRS 430 (537)
T ss_pred -CC--------CC-----CCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcC----CCeEEEecch
Confidence 11 22 45678999999955 58888 799999998885 7899999999
Q ss_pred CceEeeeeeecCHHHHHHHHHHH
Q 007464 429 NLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 429 ~~~i~v~Gekv~e~~v~~av~~a 451 (603)
+|+|+.+|+++++.|||++|.+-
T Consensus 431 KdlIk~~G~qv~P~EiE~vL~~h 453 (537)
T KOG1176|consen 431 KDLIKYGGEQVSPAEIEAVLLTH 453 (537)
T ss_pred hhheeeCCEEeCHHHHHHHHHhC
Confidence 99999999999999999999853
No 73
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.26 E-value=1.5e-09 Score=119.93 Aligned_cols=130 Identities=12% Similarity=0.158 Sum_probs=87.5
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCCC---CCccccceeecCCceEEEEEeCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPS---LPPELATFAVLPNIGYFEFIPQR 364 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~-~i~~~~~---~~~~~~~~~l~~~~~~~EFip~~ 364 (603)
++.++ .++.||. ....+.+++. |+++. +.||+||+.. ....... ...+..|.. .++ .-++.++.+
T Consensus 263 ~~~lr---~~~~gG~~~~~~~~~~~~~~--g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p-~~~-~~~~i~d~~ 334 (496)
T PRK06839 263 LQSVR---WFYNGGAPCPEELMREFIDR--GFLFG-QGFGMTETSPTVFMLSEEDARRKVGSIGKP-VLF-CDYELIDEN 334 (496)
T ss_pred Ccccc---eEEECCCCCCHHHHHHHHHh--CCeeE-eeccCCCCCcceEecccccccccCCCCccc-CCC-ceEEEECCC
Confidence 45677 6666663 4555556654 58888 9999999753 2221111 111122322 122 234444332
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEccc---ccee-------------eceeCCEEEEeceeCCCCEEEEEeec
Q 007464 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (603)
Q Consensus 365 ~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~---~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~ 428 (603)
+ . +++.|+.|||+|++. .|+| +|+|||+++.+. ...+.|+||.
T Consensus 335 ----~--------~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~ 393 (496)
T PRK06839 335 ----K--------N-----KVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVDE----DGFVYIVGRK 393 (496)
T ss_pred ----c--------C-----CCCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEcC----CCcEEEeccc
Confidence 1 1 357899999999774 4554 399999999975 5788999999
Q ss_pred CceEeeeeeecCHHHHHHHHHH
Q 007464 429 NLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 429 ~~~i~v~Gekv~e~~v~~av~~ 450 (603)
+|+++..|++|++.+||+++.+
T Consensus 394 ~d~i~~~G~~v~p~~iE~~l~~ 415 (496)
T PRK06839 394 KEMIISGGENIYPLEVEQVINK 415 (496)
T ss_pred cceEEECCEEECHHHHHHHHHh
Confidence 9999999999999999999975
No 74
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.25 E-value=4.3e-10 Score=126.67 Aligned_cols=132 Identities=15% Similarity=0.203 Sum_probs=90.0
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CccccceeecCCceEEEEEeCCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
+++++ .+.+||. ....+++++.+ +++++ +.||+||+...+...+.. .++..+.. .+ +.-+..++.+
T Consensus 328 l~~lr---~v~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~-~~-~~~v~i~d~~- 399 (560)
T PRK08751 328 FSSLK---MTLGGGMAVQRSVAERWKQVT-GLTLV-EAYGLTETSPAACINPLTLKEYNGSIGLP-IP-STDACIKDDA- 399 (560)
T ss_pred hhhhe---eeeeCCCCCCHHHHHHHHHHh-CCeEE-EeeccccCCCceecccccccccCCCcCcc-CC-CceEEEECCC-
Confidence 45778 6666662 55556677777 57888 999999985444322211 01112221 22 2233333321
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEccc---ccee--------------eceeCCEEEEeceeCCCCEEEEEeec
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~---~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~ 428 (603)
+. .++.|+.|||+|++. .||| +|+|||+++++. ...+.++||.
T Consensus 400 -----------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~GR~ 459 (560)
T PRK08751 400 -----------GT-----VLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDE----QGFVYIVDRK 459 (560)
T ss_pred -----------CC-----CCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcC----CceEEEEeec
Confidence 22 456789999999773 4554 499999999875 6789999999
Q ss_pred CceEeeeeeecCHHHHHHHHHHH
Q 007464 429 NLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 429 ~~~i~v~Gekv~e~~v~~av~~a 451 (603)
+|+++++|+++++.+||++|.+.
T Consensus 460 ~d~i~~~G~~v~p~eiE~~l~~~ 482 (560)
T PRK08751 460 KDMILVSGFNVYPNEIEDVIAMM 482 (560)
T ss_pred hhheeECCEEEcHHHHHHHHHhC
Confidence 99999999999999999999754
No 75
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.25 E-value=7.9e-11 Score=136.03 Aligned_cols=133 Identities=12% Similarity=0.151 Sum_probs=85.3
Q ss_pred CCceeeEEeecCh--HHHHHHHHHHhCCCCeeccccccCcccceecCC-CCC--CccccceeecCCceEEEEEeCCCCCc
Q 007464 294 NAKYLSGIMTGSM--EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PSL--PPELATFAVLPNIGYFEFIPQRLGNL 368 (603)
Q Consensus 294 ~L~~i~~~~~G~~--~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~-~~~--~~~~~~~~l~~~~~~~EFip~~~~~~ 368 (603)
+++ .+++||+ ..-..++.+.++..+++ ++||+||+..++... +.. ..+.+|..+ |+. -+-+++.+ +.
T Consensus 384 ~lr---~~~~Ggapl~~~~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~-p~~-ev~i~d~~--~~ 455 (660)
T PLN02861 384 RVR---LLLSGAAPLPRHVEEFLRVTSCSVLS-QGYGLTESCGGCFTSIANVFSMVGTVGVPM-TTI-EARLESVP--EM 455 (660)
T ss_pred cEE---EEEECCCCCCHHHHHHHHHHcCCCee-EecchhhhhhceeecccccCCCCCCccCcc-Cce-EEEEEEcc--cc
Confidence 567 6677774 22233444556545777 999999974332211 111 122344432 321 22333322 11
Q ss_pred ccccccCCCccccccccCCCCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecCceE
Q 007464 369 ESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 432 (603)
Q Consensus 369 ~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i 432 (603)
+ . ..+..|+.|||+|.. +.||| +|+|||+++++. ...+.|+||.+|+|
T Consensus 456 g--------~----~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~GR~kd~I 519 (660)
T PLN02861 456 G--------Y----DALSDVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQP----NGAMKIIDRKKNIF 519 (660)
T ss_pred C--------c----ccCCCCCceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEEECC----CCcEEEEeccccce
Confidence 1 0 122356678999965 67888 599999999985 68999999999999
Q ss_pred ee-eeeecCHHHHHHHHHH
Q 007464 433 TI-NIDKNTEKDLQLSVDE 450 (603)
Q Consensus 433 ~v-~Gekv~e~~v~~av~~ 450 (603)
++ +|++|++.+||+++.+
T Consensus 520 k~~~G~~I~p~eIE~~l~~ 538 (660)
T PLN02861 520 KLSQGEYVAVENLENTYSR 538 (660)
T ss_pred EcCCCeEEcHHHHHHHHhc
Confidence 97 7999999999999875
No 76
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.24 E-value=3.4e-09 Score=116.93 Aligned_cols=132 Identities=17% Similarity=0.209 Sum_probs=87.3
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC--CccccceeecCCceEEEEEeCCCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL--PPELATFAVLPNIGYFEFIPQRLG 366 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~--~~~~~~~~l~~~~~~~EFip~~~~ 366 (603)
.++++ .++.||. ....+++++.+ +++++ +.||+||+.+.+...... .++..+..+ ++ .-..+++.+
T Consensus 240 l~~l~---~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~vG~~~-~g-~~~~i~d~~-- 310 (471)
T PRK07787 240 LRGAR---LLVSGSAALPVPVFDRLAALT-GHRPV-ERYGMTETLITLSTRADGERRPGWVGLPL-AG-VETRLVDED-- 310 (471)
T ss_pred cccee---EEEECCCCCCHHHHHHHHHHc-CCCee-cccCccccCcceecCCCCcccCCcccccC-CC-cEEEEECCC--
Confidence 35677 6666763 45566777777 57899 999999986543211111 112233322 22 233333321
Q ss_pred CcccccccCCCccccccccCCCC-eEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeec
Q 007464 367 NLESQVLCIEPKPVGLTEVKVGE-EYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G~-~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~ 428 (603)
+..+. ..|+ .|||++++ ..|+| +|+|||+++++. ...+.++||.
T Consensus 311 ----------~~~~~----~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~----dg~l~~~GR~ 372 (471)
T PRK07787 311 ----------GGPVP----HDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDP----DGMHRIVGRE 372 (471)
T ss_pred ----------CCCCC----CCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcC----CCCEEEeCCC
Confidence 12221 1343 78999976 35666 599999999974 6789999996
Q ss_pred -CceEeeeeeecCHHHHHHHHHH
Q 007464 429 -NLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 429 -~~~i~v~Gekv~e~~v~~av~~ 450 (603)
+++++++|+|+++.+||++|..
T Consensus 373 ~d~~i~~~G~~v~~~eIE~~l~~ 395 (471)
T PRK07787 373 STDLIKSGGYRIGAGEIETALLG 395 (471)
T ss_pred CceeEeeCCEEECHHHHHHHHHh
Confidence 8999999999999999999975
No 77
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.24 E-value=1.1e-09 Score=127.58 Aligned_cols=127 Identities=13% Similarity=0.158 Sum_probs=81.2
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC--CCCccccceeecCCceEEEEEeCCCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP--SLPPELATFAVLPNIGYFEFIPQRLGN 367 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~--~~~~~~~~~~l~~~~~~~EFip~~~~~ 367 (603)
++|+ .+++||. ....+.+++.+ |++++ +.||+||+...+...+ ...++..|.. .|+. -...++.+
T Consensus 479 ~~lr---~i~~gg~~l~~~~~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~svG~p-~pg~-~~~i~d~~--- 548 (718)
T PRK08043 479 ARLR---YVVAGAEKLQESTKQLWQDKF-GLRIL-EGYGVTECAPVVSINVPMAAKPGTVGRI-LPGM-DARLLSVP--- 548 (718)
T ss_pred cceE---EEEEeCccCCHHHHHHHHHHc-CCCee-cccCcccccceEEecCCcccCCCCCCCc-CCCC-eeEEecCC---
Confidence 5688 6677763 44556666677 58999 9999999843222111 1112223332 2221 12222221
Q ss_pred cccccccCCCccccccccCCCCeEEEEEcc---cccee-----------------------eceeCCEEEEeceeCCCCE
Q 007464 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------------------RYRLGDVVKVMGFHNSTPE 421 (603)
Q Consensus 368 ~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-----------------------RYr~GDvvrv~g~~~~~P~ 421 (603)
+ .|+.|||.+.. +.||| +|+|||+++++. ...
T Consensus 549 -~-----------------~~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~----dG~ 606 (718)
T PRK08043 549 -G-----------------IEQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDE----QGF 606 (718)
T ss_pred -C-----------------CCCceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEcC----CCc
Confidence 0 13345666533 12322 599999999985 678
Q ss_pred EEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 422 LKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 422 i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
+.|+||.+|+|++.|++|++.+||+++.+.
T Consensus 607 l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~ 636 (718)
T PRK08043 607 VQIQGRAKRFAKIAGEMVSLEMVEQLALGV 636 (718)
T ss_pred EEEEecCCCeeEeCcEEcCHHHHHHHHHhC
Confidence 999999999999999999999999998754
No 78
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.23 E-value=2.9e-09 Score=119.85 Aligned_cols=129 Identities=18% Similarity=0.214 Sum_probs=88.5
Q ss_pred EEeecCh---HHHHHHHHHHhCCCCeeccccccCccc-ceecCC-CCC-----CccccceeecCCceEEEEEeCCCCCcc
Q 007464 300 GIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGW-IGANVN-PSL-----PPELATFAVLPNIGYFEFIPQRLGNLE 369 (603)
Q Consensus 300 ~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~-~~i~~~-~~~-----~~~~~~~~l~~~~~~~EFip~~~~~~~ 369 (603)
.+++||. ...++++++.+++++++ +.||+||+. +++... +.. ....+|..+ |+ .=+++++.+
T Consensus 307 ~i~~~g~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~-~~-~~v~i~d~~----- 378 (546)
T PLN02330 307 AIMTAAAPLAPELLTAFEAKFPGVQVQ-EAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFIL-PN-LEVKFIDPD----- 378 (546)
T ss_pred eEEEcCCcCCHHHHHHHHHHcCCCeEE-ecccccccccceecCCCccccccccccCcccccc-CC-cEEEEEeCC-----
Confidence 5566662 56667788888789999 999999974 332211 110 011123322 22 235555533
Q ss_pred cccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeecCceE
Q 007464 370 SQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 432 (603)
Q Consensus 370 ~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i 432 (603)
+.+ .+++|+.|||+|++ ..||| +|+|||+++++. ...+.|.||.+|++
T Consensus 379 ------~~~-----~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----dG~l~~~GR~~d~i 443 (546)
T PLN02330 379 ------TGR-----SLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDD----DGDIFIVDRIKELI 443 (546)
T ss_pred ------CCc-----cCCCCCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeC----CCcEEEEechHHhh
Confidence 112 45689999999975 34554 499999999985 56899999999999
Q ss_pred eeeeeecCHHHHHHHHHHH
Q 007464 433 TINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 433 ~v~Gekv~e~~v~~av~~a 451 (603)
++.|++|++.+|+.+|.+.
T Consensus 444 ~~~G~~v~~~~iE~~l~~~ 462 (546)
T PLN02330 444 KYKGFQVAPAELEAILLTH 462 (546)
T ss_pred hcCCEEECHHHHHHHHHhC
Confidence 9999999999999999753
No 79
>PRK12467 peptide synthase; Provisional
Probab=99.22 E-value=1.4e-10 Score=156.15 Aligned_cols=133 Identities=12% Similarity=0.112 Sum_probs=91.6
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC--CC-----ccccceeecCCceEEEEE
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS--LP-----PELATFAVLPNIGYFEFI 361 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~--~~-----~~~~~~~l~~~~~~~EFi 361 (603)
.|+|+ .++.||. ....+++.+.++++.++ +.||+||+.+.....+. .. ....|.. .++. ++.
T Consensus 3350 ~~~lr---~~~~gGe~~~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p-~~~~---~~~ 3421 (3956)
T PRK12467 3350 CASLD---IYVFGGEAVPPAAFEQVKRKLKPRGLT-NGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRP-VAGR---SIY 3421 (3956)
T ss_pred CCCce---EEEEecCCCCHHHHHHHHHhCCCCEEE-eCcccchhEeeeEEEecccccccCCCCCCCccc-cCCC---EEE
Confidence 46788 6677773 44556666667778898 99999998654322111 00 0112222 2222 222
Q ss_pred eCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee---------------------eceeCCEEEEeceeC
Q 007464 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------------RYRLGDVVKVMGFHN 417 (603)
Q Consensus 362 p~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~---------------------RYr~GDvvrv~g~~~ 417 (603)
-.+ +. .+ .|++|+.|||+|.. ..||| .|||||+++...
T Consensus 3422 v~d--~~--------~~-----~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~--- 3483 (3956)
T PRK12467 3422 VLD--GQ--------LN-----PVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRA--- 3483 (3956)
T ss_pred EEC--CC--------CC-----CCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecC---
Confidence 222 11 22 46789999999976 36665 299999999985
Q ss_pred CCCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 418 STPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 418 ~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
...+.|+||.+++++++|.+|...|||++|.+.
T Consensus 3484 -dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~ 3516 (3956)
T PRK12467 3484 -DGVIEYLGRIDHQVKIRGFRIELGEIEARLLQH 3516 (3956)
T ss_pred -CCcEEEeccccceEeeceEeecHHHHHHHHhhC
Confidence 789999999999999999999999999999763
No 80
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.22 E-value=1.5e-09 Score=122.06 Aligned_cols=136 Identities=9% Similarity=0.031 Sum_probs=87.0
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccce-ecCCCCC------CccccceeecCCceEEEEE
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIG-ANVNPSL------PPELATFAVLPNIGYFEFI 361 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~-i~~~~~~------~~~~~~~~l~~~~~~~EFi 361 (603)
.|+++ .+++||. ....+.+ +.+ ++++. +.||+||+... +...... .++..|.. .++. -..++
T Consensus 285 ~~~lr---~~~~gG~~~~~~~~~~~-~~~-g~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~-~~g~-~v~i~ 356 (540)
T PRK05857 285 VPSLR---LVGYGGSRAIAADVRFI-EAT-GVRTA-QVYGLSETGCTALCLPTDDGSIVKIEAGAVGRP-YPGV-DVYLA 356 (540)
T ss_pred Cccce---EEEEcCccCCchhHHHH-HHh-CCeee-cccCCCcCCceeeecccccccccccccCCcCcc-cCCc-EEEEE
Confidence 56788 5666663 2222222 345 58988 99999997432 2211100 11223332 2222 22233
Q ss_pred eCCCCCcccccccCCCccccccccCCCCeEEEEEccc---ccee-------------eceeCCEEEEeceeCCCCEEEEE
Q 007464 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFI 425 (603)
Q Consensus 362 p~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~---~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~ 425 (603)
+.+ + ...+....++.|+.|||+|++. .||| +|+|||+++.+. ...+.|+
T Consensus 357 d~~----~-------~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d~----~g~l~~~ 421 (540)
T PRK05857 357 ATD----G-------IGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERRE----DGFFYIK 421 (540)
T ss_pred Ccc----c-------cCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhcCCCceeccceEEEcC----CceEEEe
Confidence 322 1 1122223456789999999873 5666 699999999874 6789999
Q ss_pred eecCceEeeeeeecCHHHHHHHHHH
Q 007464 426 CRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 426 gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
||.+++++++|+++++.+||.++..
T Consensus 422 GR~~~~ik~~G~~v~p~eIE~~l~~ 446 (540)
T PRK05857 422 GRSSEMIICGGVNIAPDEVDRIAEG 446 (540)
T ss_pred ccccccEecCCEEECHHHHHHHHHh
Confidence 9999999999999999999999975
No 81
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.22 E-value=1.1e-08 Score=113.90 Aligned_cols=130 Identities=13% Similarity=0.078 Sum_probs=90.6
Q ss_pred CCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCccccceeecCCceEEEEEeCCCC
Q 007464 293 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 366 (603)
Q Consensus 293 P~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~---~~~~~~~~~l~~~~~~~EFip~~~~ 366 (603)
++++ .+++|| ....++++++.+ +++++ +.||+||+.......+. ..++..|.. .++ .-+++++.+
T Consensus 271 ~~l~---~v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~d~~-- 341 (509)
T PRK12406 271 SSLR---HVIHAAAPCPADVKRAMIEWW-GPVIY-EYYGSTESGAVTFATSEDALSHPGTVGKA-APG-AELRFVDED-- 341 (509)
T ss_pred Ccee---EEEEcCCCCCHHHHHHHHHHc-CCcEE-eeccccccCceEecCcccccccCCCcCcc-CCC-cEEEEECCC--
Confidence 5677 667666 366677788878 57888 99999997532211111 112223432 233 334444432
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEccc----ccee-------------eceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV----AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~----~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
+ ..++.|+.|||++++. .|++ +|+|||+++.+. ...+.|+||.+
T Consensus 342 ----------~-----~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~~ 402 (509)
T PRK12406 342 ----------G-----RPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDA----DGYLFLCDRKR 402 (509)
T ss_pred ----------C-----CCCCCCCceEEEEECCccccccccCCchhcccccCCCCeEEccEEEEcC----CceEEEeeccc
Confidence 1 2456899999999763 2555 599999999985 57899999999
Q ss_pred ceEeeeeeecCHHHHHHHHHH
Q 007464 430 LLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 430 ~~i~v~Gekv~e~~v~~av~~ 450 (603)
|+++++|++|++.+||++|.+
T Consensus 403 d~ik~~G~~v~~~~IE~~l~~ 423 (509)
T PRK12406 403 DMVISGGVNIYPAEIEAVLHA 423 (509)
T ss_pred ceEEECCEEECHHHHHHHHHh
Confidence 999999999999999999975
No 82
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.22 E-value=4.2e-09 Score=116.05 Aligned_cols=128 Identities=18% Similarity=0.190 Sum_probs=84.8
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccce-ecCCCCC---CccccceeecCCceEEEEEeCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIG-ANVNPSL---PPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~-i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
..++ ++..||. ...++.+++ + +++++ +.||+||.... +...+.. .++..|.. .++ .|+.-.+
T Consensus 254 ~~lr---~~~~~g~~~~~~~~~~~~~-~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p-~~~---~~~~i~~- 322 (483)
T PRK03640 254 SSFR---CMLLGGGPAPKPLLEQCKE-K-GIPVY-QSYGMTETASQIVTLSPEDALTKLGSAGKP-LFP---CELKIEK- 322 (483)
T ss_pred Ccce---EEEEcCCCCCHHHHHHHHH-h-CCCee-eeeccCcccccccccCcccccccCCCcccc-cCC---cEEEEec-
Confidence 3677 6666663 333444444 3 68999 99999996432 2111111 11223322 222 3332222
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEccc---ccee-------------eceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~---~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
+ + .+++.|+.|||+|++. .||+ +|+|||+++.+. ...+.|.||.+
T Consensus 323 -~---------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl~~~~~----~g~l~~~GR~~ 383 (483)
T PRK03640 323 -D---------G-----VVVPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDIGYLDE----EGFLYVLDRRS 383 (483)
T ss_pred -C---------C-----CcCCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccceEEEcC----CCCEEEeeccc
Confidence 1 1 1457899999999873 4554 599999999985 57899999999
Q ss_pred ceEeeeeeecCHHHHHHHHHH
Q 007464 430 LLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 430 ~~i~v~Gekv~e~~v~~av~~ 450 (603)
|+++++|++++..+|++++.+
T Consensus 384 ~~i~~~G~~v~~~~ie~~i~~ 404 (483)
T PRK03640 384 DLIISGGENIYPAEIEEVLLS 404 (483)
T ss_pred CeEEeCCEEECHHHHHHHHHh
Confidence 999999999999999999975
No 83
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.21 E-value=7.1e-10 Score=124.81 Aligned_cols=128 Identities=16% Similarity=0.154 Sum_probs=83.1
Q ss_pred HHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCccccceeecCCceEEEEEeCCCCCcccc---cccCCCcccccc
Q 007464 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ---VLCIEPKPVGLT 383 (603)
Q Consensus 307 ~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~---~~~~~~~~v~l~ 383 (603)
....+++.+.+ +++++ +.||+||+...+...+..+++..|..+ ++ ++++..+ ..... .-+++++.+
T Consensus 277 ~~~~~~~~~~~-~~~l~-~~YG~tE~~~~~~~~~~~~~~~vG~p~-~g---~~i~~~~--~~~~~~~~~~d~~g~~~--- 345 (540)
T PRK13388 277 PRDIAEFSRRF-GCQVE-DGYGSSEGAVIVVREPGTPPGSIGRGA-PG---VAIYNPE--TLTECAVARFDAHGALL--- 345 (540)
T ss_pred HHHHHHHHHHh-CCcee-cccccccccceeecCCCCCCCCCCCCC-CC---cEEEcCC--CCccccceeccCccccc---
Confidence 44556666667 58998 999999985433322222333345443 33 3444332 10000 000011111
Q ss_pred ccCCCCeEEEEEc-c---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHH
Q 007464 384 EVKVGEEYEIIVT-N---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQL 446 (603)
Q Consensus 384 eve~G~~yELVvT-t---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~ 446 (603)
...|+.|||+++ + +.||| +|+|||+++.+. ...+.++||.+|+++++|+++++.+||+
T Consensus 346 -~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~----dg~l~i~GR~~d~i~~~G~~v~p~eIE~ 420 (540)
T PRK13388 346 -NADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDA----DGWIYFAGRTADWMRVDGENLSAAPIER 420 (540)
T ss_pred -cCCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccceEEEcC----CCcEEEeccCCceEEECCEEeCHHHHHH
Confidence 134678999997 4 35666 699999999985 5789999999999999999999999999
Q ss_pred HHHH
Q 007464 447 SVDE 450 (603)
Q Consensus 447 av~~ 450 (603)
+|.+
T Consensus 421 ~l~~ 424 (540)
T PRK13388 421 ILLR 424 (540)
T ss_pred HHHh
Confidence 8875
No 84
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.20 E-value=2.7e-09 Score=120.43 Aligned_cols=132 Identities=16% Similarity=0.132 Sum_probs=90.1
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC---CCCccccceeecCCceEEEEEeCCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP---SLPPELATFAVLPNIGYFEFIPQRLG 366 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~---~~~~~~~~~~l~~~~~~~EFip~~~~ 366 (603)
++++ .+++||. .....++++.+ +++++ +.||+||+........ ...++..+. ..++. -.+.++.+
T Consensus 323 ~~lr---~v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~~-~~~i~~~~-- 393 (563)
T PRK06710 323 SSIR---ACISGSAPLPVEVQEKFETVT-GGKLV-EGYGLTESSPVTHSNFLWEKRVPGSIGV-PWPDT-EAMIMSLE-- 393 (563)
T ss_pred hhhh---heeeCCCcCCHHHHHHHHHhh-CCCEe-cccccccCccccccCcccccccCCccCC-CCCCC-eEEEEECC--
Confidence 5677 5566652 45556677767 57888 9999999753211111 111112232 23443 34555543
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEccc---ccee-------------eceeCCEEEEeceeCCCCEEEEEeecCc
Q 007464 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNL 430 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~---~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~ 430 (603)
+++ .+..|+.|||++++. .||| +|+|||++..+. ...+.++||.+|
T Consensus 394 ---------~~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~~~~~GR~dd 455 (563)
T PRK06710 394 ---------TGE-----ALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDE----DGFFYVKDRKKD 455 (563)
T ss_pred ---------CCc-----cCCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcC----CCcEEEeecccc
Confidence 112 457799999999773 5555 399999999875 678999999999
Q ss_pred eEeeeeeecCHHHHHHHHHHH
Q 007464 431 LLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 431 ~i~v~Gekv~e~~v~~av~~a 451 (603)
+++++|+++++.+||++|.+.
T Consensus 456 ~i~~~G~~v~p~eiE~~l~~~ 476 (563)
T PRK06710 456 MIVASGFNVYPREVEEVLYEH 476 (563)
T ss_pred EEEECCEEECHHHHHHHHHhC
Confidence 999999999999999999764
No 85
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.20 E-value=2.2e-09 Score=119.90 Aligned_cols=131 Identities=15% Similarity=0.111 Sum_probs=86.8
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC--------CccccceeecCCceEEEE
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL--------PPELATFAVLPNIGYFEF 360 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~--------~~~~~~~~l~~~~~~~EF 360 (603)
.++++ .+..||. ......+.+.++ .++. +.||+||+..++...... .....|.. .| +.-++.
T Consensus 280 l~~lr---~~~~gg~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p-~~-g~~v~i 352 (524)
T PRK06188 280 LSSLE---TVYYGASPMSPVRLAEAIERFG-PIFA-QYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRP-TP-GLRVAL 352 (524)
T ss_pred Cccee---EEEEcCCCCCHHHHHHHHHHhC-chhh-heeCccccCCceeecCchhccccccccCCccccc-cC-CcEEEE
Confidence 45777 5555652 334455555664 5676 999999985433321110 00112221 22 223444
Q ss_pred EeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEE
Q 007464 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKF 424 (603)
Q Consensus 361 ip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f 424 (603)
++.+ ++ +++.|+.|||+|++ +.|+| +|+|||+++.+. ...+.|
T Consensus 353 ~~~~------------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~ 411 (524)
T PRK06188 353 LDED------------GR-----EVAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAREDE----DGFYYI 411 (524)
T ss_pred EcCC------------CC-----CCCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEEEcC----CccEEE
Confidence 4332 12 45789999999987 35555 699999999985 578999
Q ss_pred EeecCceEeeeeeecCHHHHHHHHHH
Q 007464 425 ICRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 425 ~gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
.||.+++++++|+++++.+|++++.+
T Consensus 412 ~GR~~~~i~~~G~~i~~~~IE~~l~~ 437 (524)
T PRK06188 412 VDRKKDMIVTGGFNVFPREVEDVLAE 437 (524)
T ss_pred EeccccceecCCEEECHHHHHHHHHh
Confidence 99999999999999999999998864
No 86
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.20 E-value=2.1e-09 Score=120.77 Aligned_cols=129 Identities=16% Similarity=0.166 Sum_probs=85.9
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC-CC---CccccceeecCCceEEEEEeCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP-SL---PPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~-~~---~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
++++ .+++||. ....+.+.+ + +++++ +.||+||+........ .+ .....+.. . .+..++.++.+
T Consensus 302 ~~lr---~i~~gG~~~~~~~~~~~~~-~-~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~-~-~~~~~~i~d~~- 372 (547)
T PRK06087 302 SALR---FFLCGGTTIPKKVARECQQ-R-GIKLL-SVYGSTESSPHAVVNLDDPLSRFMHTDGYA-A-AGVEIKVVDEA- 372 (547)
T ss_pred CCeE---EEEEcCCCCCHHHHHHHHH-c-CCcEE-EEecccccCCccccCCCcchhhcCCcCCcc-C-CCceEEEEcCC-
Confidence 5677 6666663 344444544 3 68999 9999999743221111 11 01112221 1 23445554422
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeec
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~ 428 (603)
+. +++.|+.|||+|.+ +.||| +|+|||+++.+. .+.+.|.||.
T Consensus 373 -----------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~ 432 (547)
T PRK06087 373 -----------RK-----TLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDE----AGYIKITGRK 432 (547)
T ss_pred -----------CC-----CCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECC----CCCEEEEecc
Confidence 12 45789999999955 34443 599999999875 5788999999
Q ss_pred CceEeeeeeecCHHHHHHHHHH
Q 007464 429 NLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 429 ~~~i~v~Gekv~e~~v~~av~~ 450 (603)
+|+++++|+++++.+|+++|..
T Consensus 433 ~d~i~~~G~~v~p~~iE~~l~~ 454 (547)
T PRK06087 433 KDIIVRGGENISSREVEDILLQ 454 (547)
T ss_pred hhhhhcCCEEECHHHHHHHHHh
Confidence 9999999999999999999975
No 87
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.20 E-value=5.3e-09 Score=116.34 Aligned_cols=131 Identities=11% Similarity=0.041 Sum_probs=87.7
Q ss_pred CCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCC--CccccceeecCCceEEEEEeCCCCC
Q 007464 293 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL--PPELATFAVLPNIGYFEFIPQRLGN 367 (603)
Q Consensus 293 P~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~--~~~~~~~~l~~~~~~~EFip~~~~~ 367 (603)
.+++ .+..|| .....+.+++.+ +++++ +.||+||........... ..+..|.. .+ +.-++.++.+
T Consensus 278 ~~l~---~~~~~G~~l~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~G~~-~~-g~~v~i~d~~--- 347 (508)
T TIGR02262 278 VRLR---LCTSAGEALPAEVGQRWQARF-GVDIV-DGIGSTEMLHIFLSNLPGDVRYGTSGKP-VP-GYRLRLVGDG--- 347 (508)
T ss_pred ccce---eEEEcCCCCCHHHHHHHHHHh-CCchh-hCccccccCceeecCCccCCCCCCcCCC-CC-CcEEEEECCC---
Confidence 3566 445555 255556677777 58888 999999974322111111 11112221 12 2235555421
Q ss_pred cccccccCCCccccccccCCCCeEEEEEccc---ccee-------------eceeCCEEEEeceeCCCCEEEEEeecCce
Q 007464 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLL 431 (603)
Q Consensus 368 ~~~~~~~~~~~~v~l~eve~G~~yELVvTt~---~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~ 431 (603)
+. .+.+|+.|||++++. .||| +|+|||+++... ...+.|+||.+|+
T Consensus 348 ---------~~-----~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~gR~~d~ 409 (508)
T TIGR02262 348 ---------GQ-----DVAAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRND----DGSYTYAGRTDDM 409 (508)
T ss_pred ---------CC-----CCCCCCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEcC----CccEEEeccccce
Confidence 22 356799999999873 4554 589999999874 5689999999999
Q ss_pred EeeeeeecCHHHHHHHHHHH
Q 007464 432 LTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 432 i~v~Gekv~e~~v~~av~~a 451 (603)
+++.|+++++.+|+++|.+.
T Consensus 410 i~~~G~~v~~~~ie~~l~~~ 429 (508)
T TIGR02262 410 LKVSGIYVSPFEIESALIQH 429 (508)
T ss_pred eeeCCEEECHHHHHHHHHhC
Confidence 99999999999999999753
No 88
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=99.20 E-value=1.1e-10 Score=124.43 Aligned_cols=63 Identities=16% Similarity=0.335 Sum_probs=56.7
Q ss_pred ccCCCCeEEEEE---cccccee--------------eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHH
Q 007464 384 EVKVGEEYEIIV---TNVAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQL 446 (603)
Q Consensus 384 eve~G~~yELVv---Tt~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~ 446 (603)
+++.|..|||.+ +|..||| ||+|||+.+.+. .+.++++||.+|||..+||+|++.|||+
T Consensus 426 ~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~e----nG~i~iVGRskdmI~rGGENVyP~ElE~ 501 (596)
T KOG1177|consen 426 EVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDE----NGTIEIVGRSKDMIIRGGENVYPTELED 501 (596)
T ss_pred ccccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEcC----CCcEEEEEcccCeEEeCCcccChHHHHH
Confidence 567788899999 5568888 799999999996 6899999999999999999999999999
Q ss_pred HHHH
Q 007464 447 SVDE 450 (603)
Q Consensus 447 av~~ 450 (603)
.+.+
T Consensus 502 fL~~ 505 (596)
T KOG1177|consen 502 FLNK 505 (596)
T ss_pred HHhh
Confidence 8875
No 89
>PRK12316 peptide synthase; Provisional
Probab=99.20 E-value=8e-10 Score=151.66 Aligned_cols=133 Identities=15% Similarity=0.140 Sum_probs=89.3
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCC---CCCCcc----ccceeecCCceEEEEE
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN---PSLPPE----LATFAVLPNIGYFEFI 361 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~---~~~~~~----~~~~~l~~~~~~~EFi 361 (603)
.|+|+ +++.||. ....+++.+.++++.++ +.||.||+.+..... +..+.+ ..|..+ ++. -.-.
T Consensus 2260 ~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~-~~~-~~~i- 2332 (5163)
T PRK12316 2260 PPAVR---VYCFGGEAVPAASLRLAWEALRPVYLF-NGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGRAL-GNR-RAYI- 2332 (5163)
T ss_pred Cccee---EEEEecccCCHHHHHHHHHhCCCcEEE-ECccchhheeeeeeeecccccccCCCcCCccccc-CCC-EEEE-
Confidence 35788 7777773 44445555556678888 999999986533211 111110 122222 221 1112
Q ss_pred eCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee---------------------eceeCCEEEEeceeC
Q 007464 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------------RYRLGDVVKVMGFHN 417 (603)
Q Consensus 362 p~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~---------------------RYr~GDvvrv~g~~~ 417 (603)
.+ + +. ..|+.|+.|||+|.. ..||| +|||||+++.+.
T Consensus 2333 -~d--~--------~~-----~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~--- 2393 (5163)
T PRK12316 2333 -LD--A--------DL-----NLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRA--- 2393 (5163)
T ss_pred -EC--C--------CC-----CCCCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEecccEEEEcC---
Confidence 22 1 11 246789999999965 34554 599999999985
Q ss_pred CCCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 418 STPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 418 ~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
.+.+.|+||.+++++++|++|...|||.+|.+.
T Consensus 2394 -dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~ 2426 (5163)
T PRK12316 2394 -DGVVEYLGRIDHQVKIRGFRIELGEIEARLQAH 2426 (5163)
T ss_pred -CCcEEEecCCCCeEEEcCccCChHHHHHHHhhC
Confidence 689999999999999999999999999999753
No 90
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.19 E-value=5.3e-09 Score=119.10 Aligned_cols=143 Identities=13% Similarity=0.079 Sum_probs=86.7
Q ss_pred CCCCceeeEEeecC-hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCccccceeecC---CceEEEEEeCCCCC
Q 007464 292 FPNAKYLSGIMTGS-MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLP---NIGYFEFIPQRLGN 367 (603)
Q Consensus 292 WP~L~~i~~~~~G~-~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~~~~~~~~~l~~---~~~~~EFip~~~~~ 367 (603)
.++++ ++..++ .....+++.+.+|...++ +.||+||+.+.+.. ....++..+..... ...+..+-+..
T Consensus 313 ~~~l~---~~~g~~l~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~--- 384 (600)
T PRK08279 313 DHRLR---LMIGNGLRPDIWDEFQQRFGIPRIL-EFYAASEGNVGFIN-VFNFDGTVGRVPLWLAHPYAIVKYDVDT--- 384 (600)
T ss_pred Cccee---EEecCCCCHHHHHHHHHHhCcceee-eeecccccceeecc-cCCCCcccccccccccccceeeeeccCc---
Confidence 35666 334344 355666777778644577 99999998654321 11112223332110 12222221110
Q ss_pred cccccccCCCccccccccCCCCeEEEEEc--c---ccce-------------------eeceeCCEEEEeceeCCCCEEE
Q 007464 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVT--N---VAGL-------------------YRYRLGDVVKVMGFHNSTPELK 423 (603)
Q Consensus 368 ~~~~~~~~~~~~v~l~eve~G~~yELVvT--t---~~GL-------------------~RYr~GDvvrv~g~~~~~P~i~ 423 (603)
+..-...+. .+.++++|+.|||++. . +.|| -+|+|||+++++. ...+.
T Consensus 385 -~~~i~~~~~---~~~~~~~g~~Gel~~~i~~~~~~~GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~----dG~l~ 456 (600)
T PRK08279 385 -GEPVRDADG---RCIKVKPGEVGLLIGRITDRGPFDGYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDG----FGHAQ 456 (600)
T ss_pred -CceeeCCCC---ccccCCCCCceeEEEEecCcccccccCCchhhHHHHhhcccCCCCceEeecceEEEcC----CccEE
Confidence 100000011 1235788999999842 2 2333 2699999999985 57899
Q ss_pred EEeecCceEeeeeeecCHHHHHHHHHH
Q 007464 424 FICRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 424 f~gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
|.||.+|+++++|++|++.+||++|.+
T Consensus 457 ~~GR~~d~ik~~G~~i~p~eIE~~l~~ 483 (600)
T PRK08279 457 FVDRLGDTFRWKGENVATTEVENALSG 483 (600)
T ss_pred EecccCCeEEECCcccCHHHHHHHHhc
Confidence 999999999999999999999999986
No 91
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.19 E-value=1.8e-09 Score=126.27 Aligned_cols=132 Identities=17% Similarity=0.212 Sum_probs=87.8
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCC-CC-CCccccceeecCCceEEEEEeCCCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS-LPPELATFAVLPNIGYFEFIPQRLGN 367 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~-~~-~~~~~~~~~l~~~~~~~EFip~~~~~ 367 (603)
++|+ .+++||+ ....+.++..+ |+++. ++||+||+...+... +. ..++.+|..+.|. .|+.-.+ .
T Consensus 461 ~~lr---~~~sGGapl~~~~~~~~~~~~-g~~i~-~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~pg---~e~ki~d--~ 530 (746)
T PTZ00342 461 PNLE---VILNGGGKLSPKIAEELSVLL-NVNYY-QGYGLTETTGPIFVQHADDNNTESIGGPISPN---TKYKVRT--W 530 (746)
T ss_pred CCeE---EEEEcCCCCCHHHHHHHHHhc-CCCEE-EeeccCcccceeeeccCCCCCcccccCcCCCc---EEEEEec--c
Confidence 5788 6777774 44555566667 58998 999999974322221 11 1223344432232 3443332 0
Q ss_pred cccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeecCc
Q 007464 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNL 430 (603)
Q Consensus 368 ~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~ 430 (603)
.+ .. ....+..|||+|.. +.||| ||+|||+++++. ...+.|+||.+|
T Consensus 531 ~~-------~~-----~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~----dG~l~i~gR~kd 594 (746)
T PTZ00342 531 ET-------YK-----ATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINK----NGSLTFLDRSKG 594 (746)
T ss_pred cc-------cc-----cCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECC----CCeEEEEccCCC
Confidence 00 00 11234568999965 57887 599999999985 689999999999
Q ss_pred eEee-eeeecCHHHHHHHHHH
Q 007464 431 LLTI-NIDKNTEKDLQLSVDE 450 (603)
Q Consensus 431 ~i~v-~Gekv~e~~v~~av~~ 450 (603)
+|++ +||+|++.+||+++.+
T Consensus 595 lIkls~Ge~I~p~eIE~~l~~ 615 (746)
T PTZ00342 595 LVKLSQGEYIETDMLNNLYSQ 615 (746)
T ss_pred eEEeCCCEEEchHHHHHHHhc
Confidence 9995 7999999999999875
No 92
>PRK12467 peptide synthase; Provisional
Probab=99.19 E-value=4.8e-10 Score=151.16 Aligned_cols=131 Identities=17% Similarity=0.243 Sum_probs=89.1
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCc---cccceeecCCceEEEEEeC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPP---ELATFAVLPNIGYFEFIPQ 363 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~---~~~---~~~~~~l~~~~~~~EFip~ 363 (603)
++++ .++.||. ....+++.+.+++++++ +.||+||+.+.+..... ... ...|.. .++.. +..++.
T Consensus 771 ~~lr---~i~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p-~~~~~-~~i~d~ 844 (3956)
T PRK12467 771 RPQR---ALVCGGEALQVDLLARVRALGPGARLI-NHYGPTETTVGVSTYELSDEERDFGNVPIGQP-LANLG-LYILDH 844 (3956)
T ss_pred Cccc---EEEEEeecCCHHHHHHHHHhCCCCEEE-eCcCCChhhhheeeEecccccccCCCCcccCC-cCCCE-EEEECC
Confidence 4567 6666663 45556666666678999 99999998654322111 000 012222 23322 222322
Q ss_pred CCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee---------------------eceeCCEEEEeceeCCC
Q 007464 364 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------------RYRLGDVVKVMGFHNST 419 (603)
Q Consensus 364 ~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~---------------------RYr~GDvvrv~g~~~~~ 419 (603)
+ . ..|+.|+.|||+|+. ..||| +|||||+++.+. .
T Consensus 845 ~------------~-----~~vp~G~~GEL~i~G~~v~~GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~----d 903 (3956)
T PRK12467 845 Y------------L-----NPVPVGVVGELYIGGAGLARGYHRRPALTAERFVPDPFGADGGRLYRTGDLARYRA----D 903 (3956)
T ss_pred C------------C-----CCCCCCCceEEEecccccchhhcCCccccHhhCcCCCCCCCCceeEecCceeEEcC----C
Confidence 1 1 246789999999976 34554 499999999974 6
Q ss_pred CEEEEEeecCceEeeeeeecCHHHHHHHHHH
Q 007464 420 PELKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 420 P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
..+.|+||.+++++++|++|...+||.+|.+
T Consensus 904 G~l~~~GR~d~~vki~G~rI~~~eIE~~L~~ 934 (3956)
T PRK12467 904 GVIEYLGRMDHQVKIRGFRIELGEIEARLLA 934 (3956)
T ss_pred CcEEEeccccCeEEECCEecCHHHHHHHHHh
Confidence 7899999999999999999999999999975
No 93
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.19 E-value=4.8e-09 Score=113.85 Aligned_cols=59 Identities=12% Similarity=-0.009 Sum_probs=51.6
Q ss_pred CCCeEEEEEccccceeeceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 387 VGEEYEIIVTNVAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 387 ~G~~yELVvTt~~GL~RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
.|+.+|+++++..| +|+|||+++.+. ...+.|+||.+++++++|++|++.+||+++.+.
T Consensus 278 ~~~~gel~v~~~~~--~~~TGDl~~~~~----dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~ 336 (414)
T PRK08308 278 ENAPEEIVVKMGDK--EIFTKDLGYKSE----RGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRL 336 (414)
T ss_pred CCCCceEEEEcCCc--eEECCceEEECC----CccEEEecccCCeEEECCEEECHHHHHHHHHhC
Confidence 36678999988765 688999999875 568999999999999999999999999999753
No 94
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.17 E-value=6.2e-09 Score=110.68 Aligned_cols=44 Identities=9% Similarity=0.068 Sum_probs=40.0
Q ss_pred eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 403 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 403 RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
||+|||++++ . ...+.|+||.+|+++++|++|++.+||.+|.+.
T Consensus 235 ~~~TGDl~~~-~----~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~ 278 (358)
T PRK07824 235 WFRTDDLGAL-D----DGVLTVLGRADDAISTGGLTVLPQVVEAALATH 278 (358)
T ss_pred ceecccEEEE-e----CCEEEEEeccCCeEEECCEEECHHHHHHHHHhC
Confidence 8999999998 3 468899999999999999999999999999753
No 95
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.17 E-value=2.2e-09 Score=122.81 Aligned_cols=130 Identities=18% Similarity=0.210 Sum_probs=77.6
Q ss_pred cCCCCceeeEEeecCh---HHHHHHHHHH----hC-CCCeeccccccCcccceecCC--CCCCccccceeecCCceEEEE
Q 007464 291 LFPNAKYLSGIMTGSM---EHYLKKLRHY----AG-DLPLMSADYGSSEGWIGANVN--PSLPPELATFAVLPNIGYFEF 360 (603)
Q Consensus 291 lWP~L~~i~~~~~G~~---~~y~~~l~~~----~g-g~~i~~~~YgaSEg~~~i~~~--~~~~~~~~~~~l~~~~~~~EF 360 (603)
.+++|+ .+++||. ....+++++. +| +++++ +.||+||+...+... +...++..|.. .|+ .|+
T Consensus 332 ~~~~lr---~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~svG~p-~pg---~~v 403 (614)
T PRK08180 332 FFSRLK---LLFYAGAALSQDVWDRLDRVAEATCGERIRMM-TGLGMTETAPSATFTTGPLSRAGNIGLP-APG---CEV 403 (614)
T ss_pred hcccee---EEEEccCCCCHHHHHHHHHHHHhhcCCCceee-eeecccccCCceEecccccCCCCcccCc-cCC---cEE
Confidence 467788 6777773 4445555543 43 37788 999999975322211 11111222221 111 122
Q ss_pred EeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEE
Q 007464 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELK 423 (603)
Q Consensus 361 ip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~ 423 (603)
... ..|..|||+|.+ +.||| +|+|||++++++-......+.
T Consensus 404 ~i~----------------------d~~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~ 461 (614)
T PRK08180 404 KLV----------------------PVGGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLM 461 (614)
T ss_pred EEe----------------------cCCCCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceE
Confidence 111 124567999854 45666 699999999953111245789
Q ss_pred EEeecCceEe-eeeeecC--HHHHHHHHHH
Q 007464 424 FICRRNLLLT-INIDKNT--EKDLQLSVDE 450 (603)
Q Consensus 424 f~gR~~~~i~-v~Gekv~--e~~v~~av~~ 450 (603)
|+||.+|+++ .+|++++ +.|++.++.+
T Consensus 462 i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~ 491 (614)
T PRK08180 462 FDGRIAEDFKLSSGTWVSVGPLRARAVSAG 491 (614)
T ss_pred EecchhhhEEcCCCcEecchhhhHHHHhhc
Confidence 9999998877 5798776 7788777653
No 96
>PRK12316 peptide synthase; Provisional
Probab=99.15 E-value=3.5e-10 Score=155.08 Aligned_cols=133 Identities=14% Similarity=0.121 Sum_probs=90.7
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC----CCCccccceeecCCceEEEEEeCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP----SLPPELATFAVLPNIGYFEFIPQR 364 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~----~~~~~~~~~~l~~~~~~~EFip~~ 364 (603)
.|+++ .++.||. ....+++.+.+++++++ +.||.||+.+++.... .......|.. .++.. +..++.+
T Consensus 769 ~~~l~---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p-~~~~~-~~i~d~~ 842 (5163)
T PRK12316 769 CTSLR---RIVCSGEALPADAQEQVFAKLPQAGLY-NLYGPTEAAIDVTHWTCVEEGGDSVPIGRP-IANLA-CYILDAN 842 (5163)
T ss_pred CCCcc---EEEEeeccCCHHHHHHHHHhCCCCeEE-eCcCcChheeeeeEEecccccCCCCCCccc-cCCCE-EEEECCC
Confidence 46788 5666663 44555565556778999 9999999864332111 1111112332 23322 2222221
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------------eceeCCEEEEeceeCCCCE
Q 007464 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------------RYRLGDVVKVMGFHNSTPE 421 (603)
Q Consensus 365 ~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------------RYr~GDvvrv~g~~~~~P~ 421 (603)
.+ .++.|+.|||+|.. ..||+ +|+|||+++.+. ...
T Consensus 843 ------------~~-----~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~----dG~ 901 (5163)
T PRK12316 843 ------------LE-----PVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRA----DGV 901 (5163)
T ss_pred ------------CC-----CCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECC----CCC
Confidence 22 45789999999965 34554 699999999985 689
Q ss_pred EEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 422 LKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 422 i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
+.|+||.+++++++|++|.+.|||++|.+.
T Consensus 902 l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~ 931 (5163)
T PRK12316 902 IEYAGRIDHQVKLRGLRIELGEIEARLLEH 931 (5163)
T ss_pred EEeecccCCEEEEceEEcChHHHHHHHHhC
Confidence 999999999999999999999999999864
No 97
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.15 E-value=7.3e-09 Score=112.46 Aligned_cols=58 Identities=19% Similarity=0.268 Sum_probs=50.6
Q ss_pred CeEEEEEccc---ccee-------------eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHH
Q 007464 389 EEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 389 ~~yELVvTt~---~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
+.|||+|++. .||| +|+|||+++.++ ...+.+.||.+|+++++|++++..+|+++|.+
T Consensus 291 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 364 (436)
T TIGR01923 291 GHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDG----EGFLYVLGRRDDLIISGGENIYPEEIETVLYQ 364 (436)
T ss_pred CceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcC----CCCEEEeccccCeEEeCCEeeCHHHHHHHHHh
Confidence 6689999873 4555 399999999985 57899999999999999999999999999975
No 98
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.14 E-value=6e-09 Score=127.40 Aligned_cols=127 Identities=16% Similarity=0.182 Sum_probs=84.7
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC--CCccccceeecCCceEEEEEeCCCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS--LPPELATFAVLPNIGYFEFIPQRLGN 367 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~--~~~~~~~~~l~~~~~~~EFip~~~~~ 367 (603)
++++ .+.+||. ...++.+++.+ +++++ +.||+||+...+...+. ..++..|.. .|+. -....|.+
T Consensus 907 ~~lr---~v~~gg~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~p-~~g~-~~~~~~~~--- 976 (1140)
T PRK06814 907 RSLR---YVFAGAEKVKEETRQTWMEKF-GIRIL-EGYGVTETAPVIALNTPMHNKAGTVGRL-LPGI-EYRLEPVP--- 976 (1140)
T ss_pred ccee---EEEEcCCcCCHHHHHHHHHHh-CCcEE-eccccccccceEEecCCCCCCCCcCCcc-CCCC-eEEEeecC---
Confidence 4677 6677773 55556666667 58898 99999998544332211 111122221 1211 11111111
Q ss_pred cccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeecCc
Q 007464 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNL 430 (603)
Q Consensus 368 ~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~ 430 (603)
..|+.|||.+.+ ..|+| +|+|||+++.+. ...+.|+||.+|
T Consensus 977 ------------------~~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~~d 1034 (1140)
T PRK06814 977 ------------------GIDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDE----EGFITIKGRAKR 1034 (1140)
T ss_pred ------------------CCCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECC----CCeEEEEecccC
Confidence 136778988865 24444 799999999985 689999999999
Q ss_pred eEeeeeeecCHHHHHHHHHHH
Q 007464 431 LLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 431 ~i~v~Gekv~e~~v~~av~~a 451 (603)
+++++|+++++.|||+++.+.
T Consensus 1035 ~i~~~G~~v~~~eIE~~l~~~ 1055 (1140)
T PRK06814 1035 FAKIAGEMISLAAVEELAAEL 1055 (1140)
T ss_pred eeeeCCEEECHHHHHHHHHhc
Confidence 999999999999999998754
No 99
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.14 E-value=1.3e-08 Score=113.22 Aligned_cols=130 Identities=16% Similarity=0.101 Sum_probs=85.4
Q ss_pred CCCceeeEEeecC--hHHHHHHHHHHhCCCCeeccccccCcccceecCC-CC--CCccccceeecCCceEEEEEeCCCCC
Q 007464 293 PNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS--LPPELATFAVLPNIGYFEFIPQRLGN 367 (603)
Q Consensus 293 P~L~~i~~~~~G~--~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~-~~--~~~~~~~~~l~~~~~~~EFip~~~~~ 367 (603)
+.++ ++..|+ ....+.++.+.+ +++++ +.||+||+..+.... +. ......|.. .+ +.-.+.++.+
T Consensus 288 ~~l~---~~~~~~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~~-g~~~~i~d~~--- 357 (517)
T PRK08008 288 HCLR---EVMFYLNLSDQEKDAFEERF-GVRLL-TSYGMTETIVGIIGDRPGDKRRWPSIGRP-GF-CYEAEIRDDH--- 357 (517)
T ss_pred ccce---eeEEecCCCHHHHHHHHHHh-CCeEE-eeccccccccccccCCccccccCCccccC-CC-CcEEEEECCC---
Confidence 4566 344343 345556677777 58999 999999975322111 11 111112221 12 2234444321
Q ss_pred cccccccCCCccccccccCCCCeEEEEEccc------ccee--------------eceeCCEEEEeceeCCCCEEEEEee
Q 007464 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNV------AGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 427 (603)
Q Consensus 368 ~~~~~~~~~~~~v~l~eve~G~~yELVvTt~------~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR 427 (603)
++ ++..|+.|||+++.. .|+| +|+|||+++++. ...+.|+||
T Consensus 358 ---------~~-----~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR 419 (517)
T PRK08008 358 ---------NR-----PLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDE----EGFFYFVDR 419 (517)
T ss_pred ---------CC-----CCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECC----CCcEEEeec
Confidence 12 456799999999852 3443 599999999885 678999999
Q ss_pred cCceEeeeeeecCHHHHHHHHHH
Q 007464 428 RNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 428 ~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
.+|++++.|+++++.+||.++.+
T Consensus 420 ~~d~i~~~G~~i~p~~iE~~l~~ 442 (517)
T PRK08008 420 RCNMIKRGGENVSCVELENIIAT 442 (517)
T ss_pred ccceEEeCCEEECHHHHHHHHHh
Confidence 99999999999999999999965
No 100
>PRK05691 peptide synthase; Validated
Probab=99.14 E-value=2.6e-09 Score=145.36 Aligned_cols=133 Identities=13% Similarity=0.163 Sum_probs=91.7
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC----CCCccccceeecCCceEEEEEeCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP----SLPPELATFAVLPNIGYFEFIPQR 364 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~----~~~~~~~~~~l~~~~~~~EFip~~ 364 (603)
.|+|+ .++.||. ....+++.+.+++++++ +.||.||+.+.+.... .......|..+ ++. .+..++.+
T Consensus 1387 ~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~-~~~-~~~i~d~~ 1460 (4334)
T PRK05691 1387 CTSLR---RLFSGGEALPAELRNRVLQRLPQVQLH-NRYGPTETAINVTHWQCQAEDGERSPIGRPL-GNV-LCRVLDAE 1460 (4334)
T ss_pred CCccc---EEEEeecCCCHHHHHHHHHhCCCcEEE-eCCCcChheeeeeeeecccccCCCCccccee-CCC-EEEEECCC
Confidence 46788 6677773 55556677777788999 9999999865432111 11111123322 222 23333221
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEcc---cccee---------------------eceeCCEEEEeceeCCCC
Q 007464 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------------RYRLGDVVKVMGFHNSTP 420 (603)
Q Consensus 365 ~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~---------------------RYr~GDvvrv~g~~~~~P 420 (603)
.+ .|+.|+.|||+|.. ..||+ .|||||+++... .+
T Consensus 1461 ------------~~-----~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~----dG 1519 (4334)
T PRK05691 1461 ------------LN-----LLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNA----DG 1519 (4334)
T ss_pred ------------CC-----CCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECC----CC
Confidence 12 46789999999965 23443 599999999985 68
Q ss_pred EEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 421 ELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 421 ~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
.+.|+||.+++++++|++|...|||.+|.+.
T Consensus 1520 ~l~~~GR~d~qiki~G~rie~~eIE~~l~~~ 1550 (4334)
T PRK05691 1520 ALEYLGRLDQQVKLRGFRVEPEEIQARLLAQ 1550 (4334)
T ss_pred CEEEecccCcEEEECCEEcCHHHHHHHHHhC
Confidence 9999999999999999999999999999753
No 101
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.13 E-value=1.1e-08 Score=115.90 Aligned_cols=63 Identities=27% Similarity=0.342 Sum_probs=54.6
Q ss_pred ccCCCCeEEEEEcc---cccee-------------------------eceeCCEEEEeceeCCCCEEEEEeecCceEeee
Q 007464 384 EVKVGEEYEIIVTN---VAGLY-------------------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTIN 435 (603)
Q Consensus 384 eve~G~~yELVvTt---~~GL~-------------------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~ 435 (603)
+++.|+.|||+|.+ +.||| +|+|||+++++ ...+.|+||.+|+|+++
T Consensus 391 ~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-----~G~l~~~GR~~d~i~~~ 465 (578)
T PRK05850 391 ECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-----EGELFIVGRIKDLLIVD 465 (578)
T ss_pred CCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-----CCEEEEEcccccEEEEC
Confidence 56789999999976 34655 79999999875 36899999999999999
Q ss_pred eeecCHHHHHHHHHHH
Q 007464 436 IDKNTEKDLQLSVDEA 451 (603)
Q Consensus 436 Gekv~e~~v~~av~~a 451 (603)
|++|++.+||++|.+.
T Consensus 466 G~~i~p~eIE~~l~~~ 481 (578)
T PRK05850 466 GRNHYPDDIEATIQEI 481 (578)
T ss_pred CeecCHHHHHHHHHHh
Confidence 9999999999999864
No 102
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.13 E-value=9.3e-09 Score=116.69 Aligned_cols=63 Identities=17% Similarity=0.140 Sum_probs=54.8
Q ss_pred ccCCCCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHH
Q 007464 384 EVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLS 447 (603)
Q Consensus 384 eve~G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~a 447 (603)
+++.|+.|||+++. ..||| +|+|||++.+ . ...+.|+||.+|+++++|++|++.+||++
T Consensus 405 ~~~~g~~Gel~i~g~~~~~gY~~~~~~~~~~~~dgw~~TGDlg~~-~----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~ 479 (579)
T PRK09192 405 PLPERVVGHICVRGPSLMSGYFRDEESQDVLAADGWLDTGDLGYL-L----DGYLYITGRAKDLIIINGRNIWPQDIEWI 479 (579)
T ss_pred CCCCCCEEEEEecCCchhhhhcCCccccccccCCceeeccceeeE-E----CCEEEEEeccccEEEECCCccCHHHHHHH
Confidence 45679999999976 35666 6999999987 4 57899999999999999999999999999
Q ss_pred HHHH
Q 007464 448 VDEA 451 (603)
Q Consensus 448 v~~a 451 (603)
|.+.
T Consensus 480 l~~~ 483 (579)
T PRK09192 480 AEQE 483 (579)
T ss_pred HHhc
Confidence 9874
No 103
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.13 E-value=1e-08 Score=113.72 Aligned_cols=130 Identities=13% Similarity=0.052 Sum_probs=88.1
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CccccceeecCCceEEEEEeCCC
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~ 365 (603)
+.+++ +++.||. ....+.+++.+ +.+++ +.||+||+....-....+ .++..|..+ ..-++.++.+
T Consensus 261 ~~~lr---~i~~~g~~~~~~~~~~~~~~~-~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~---~~~~~i~d~~- 331 (502)
T PRK08276 261 VSSLR---VAIHAAAPCPVEVKRAMIDWW-GPIIH-EYYASSEGGGVTVITSEDWLAHPGSVGKAV---LGEVRILDED- 331 (502)
T ss_pred cccce---EEEecCCCCCHHHHHHHHHHh-CcHhh-hhcccccccceeEecCccccccCCCcceec---ccEEEEECCC-
Confidence 45677 6676763 55667777778 46777 999999975311111111 111233322 2234433321
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEccc---ccee--------------eceeCCEEEEeceeCCCCEEEEEeec
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~---~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~ 428 (603)
.. .+..|+.|||++++. .|+| +|+|||+++++. ...+.++||.
T Consensus 332 -----------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~ 391 (502)
T PRK08276 332 -----------GN-----ELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDE----DGYLYLTDRK 391 (502)
T ss_pred -----------CC-----CCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcC----CcCEEEeccC
Confidence 12 456799999999842 3343 689999999985 5789999999
Q ss_pred CceEeeeeeecCHHHHHHHHHH
Q 007464 429 NLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 429 ~~~i~v~Gekv~e~~v~~av~~ 450 (603)
+++++++|+++++.+|+.++.+
T Consensus 392 ~~~i~~~G~~v~~~~iE~~i~~ 413 (502)
T PRK08276 392 SDMIISGGVNIYPQEIENLLVT 413 (502)
T ss_pred cceEEeCCEEeCHHHHHHHHHh
Confidence 9999999999999999999975
No 104
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.13 E-value=5.6e-09 Score=122.07 Aligned_cols=132 Identities=11% Similarity=0.019 Sum_probs=81.2
Q ss_pred CCCCceeeEEeecChH---HHHHHHHHHhCCCCeeccccccCcccceecC-CCCCC--ccccceeecCCceEEEEEeCCC
Q 007464 292 FPNAKYLSGIMTGSME---HYLKKLRHYAGDLPLMSADYGSSEGWIGANV-NPSLP--PELATFAVLPNIGYFEFIPQRL 365 (603)
Q Consensus 292 WP~L~~i~~~~~G~~~---~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~-~~~~~--~~~~~~~l~~~~~~~EFip~~~ 365 (603)
++.|+ .+.+||.. .....+.+.++..++. +.||.||+..++.. .+..+ ++..+.. .++. -...+ +
T Consensus 470 lssLr---~i~s~Ge~l~~~~~~~~~~~~~~~~i~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~p-~~g~-~v~v~--d- 540 (728)
T PLN03052 470 WSSIR---CFGSTGEASSVDDYLWLMSRAGYKPII-EYCGGTELGGGFVTGSLLQPQAFAAFSTP-AMGC-KLFIL--D- 540 (728)
T ss_pred hhhee---EEEecCCCCCHHHHHHHHHhcCCCCeE-eeccChhhCcccccCCCCCCCCCCccccC-CCCc-eEEEE--C-
Confidence 36788 66766632 2223344445445777 99999997432211 11111 1112221 2222 12233 2
Q ss_pred CCcccccccCCCccccccccCCCC--eEEEEEccc--c------------cee----------eceeCCEEEEeceeCCC
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGE--EYEIIVTNV--A------------GLY----------RYRLGDVVKVMGFHNST 419 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~--~yELVvTt~--~------------GL~----------RYr~GDvvrv~g~~~~~ 419 (603)
+. ++ +|+.|+ .|||++... . ++| .|+|||+++.+. .
T Consensus 541 -~~--------g~-----~v~~g~~~~GEL~v~~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~~d~----d 602 (728)
T PLN03052 541 -DS--------GN-----PYPDDAPCTGELALFPLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFERTS----G 602 (728)
T ss_pred -CC--------CC-----CCCCCCCceEEEEEeCCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCceEEECC----C
Confidence 11 23 345564 599999531 1 122 489999999985 6
Q ss_pred CEEEEEeecCceEeeeeeecCHHHHHHHHHH
Q 007464 420 PELKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 420 P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
..+.|+||.+|+||++|++|...|||++|..
T Consensus 603 G~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~ 633 (728)
T PLN03052 603 GYYRAHGRADDTMNLGGIKVSSVEIERVCNA 633 (728)
T ss_pred CeEEEEecCCCEEeeCCEEeCHHHHHHHHHh
Confidence 7899999999999999999999999999864
No 105
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.12 E-value=3.1e-09 Score=122.91 Aligned_cols=132 Identities=15% Similarity=0.186 Sum_probs=84.2
Q ss_pred CCCceeeEEeecCh--HHHHHHHHHHhCCCCeeccccccCcccceecCC-CC--CCccccceeecCCceEEEEE--eCCC
Q 007464 293 PNAKYLSGIMTGSM--EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS--LPPELATFAVLPNIGYFEFI--PQRL 365 (603)
Q Consensus 293 P~L~~i~~~~~G~~--~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~-~~--~~~~~~~~~l~~~~~~~EFi--p~~~ 365 (603)
.+++ .+.+||+ .+...++-+.+++++++ ++||+||+...+... +. ..++.+|-. .| ..|+- +.+
T Consensus 383 ~~lr---~~~~gga~l~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~p-~~---~~evki~d~~- 453 (660)
T PLN02430 383 GRLR---LLISGGAPLSTEIEEFLRVTSCAFVV-QGYGLTETLGPTTLGFPDEMCMLGTVGAP-AV---YNELRLEEVP- 453 (660)
T ss_pred CeEE---EEEECCCCCCHHHHHHHHHhcCCCee-eecchhhhhhceEeeccccCCCCCCccCC-CC---ceEEEEEEcC-
Confidence 3577 6677774 22223333445557888 999999974322211 11 112233332 22 23332 221
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 366 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 366 ~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
+.+ ..++..|..|||+|.+ +.||| ||+|||+++++. ...+.|+||.+
T Consensus 454 -~~g------------~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d~----dG~l~i~gR~k 516 (660)
T PLN02430 454 -EMG------------YDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEILP----NGVLKIIDRKK 516 (660)
T ss_pred -CcC------------cccCCCCCcceEEecCCCccccccCChHHhhhhhhccceeccceEEECC----CCcEEEEEccc
Confidence 111 0133446679999976 57877 699999999974 67899999999
Q ss_pred ceEee-eeeecCHHHHHHHHHH
Q 007464 430 LLLTI-NIDKNTEKDLQLSVDE 450 (603)
Q Consensus 430 ~~i~v-~Gekv~e~~v~~av~~ 450 (603)
|+|++ +|++|++.+||+++.+
T Consensus 517 d~ik~~~G~~V~p~~IE~~l~~ 538 (660)
T PLN02430 517 NLIKLSQGEYVALEYLENVYGQ 538 (660)
T ss_pred ccEEcCCCcEEchHHHHHHHhc
Confidence 99996 6999999999998864
No 106
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.10 E-value=2.9e-09 Score=121.05 Aligned_cols=60 Identities=12% Similarity=0.119 Sum_probs=52.8
Q ss_pred CCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 388 GEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 388 G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
|+.|||+|++ +.||| ||+|||+++.+. ...+.|+||.+|+++++|++|++.+||+++.+.
T Consensus 390 ~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~----dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~ 465 (579)
T PLN03102 390 KTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIHP----DGHVEIKDRSKDIIISGGENISSVEVENVLYKY 465 (579)
T ss_pred CCceEEEEECcchhhhhcCChhhhHhhhccCceecCceEEEcC----CCeEEEEeccCcEEEECCEEECHHHHHHHHHhC
Confidence 3679999976 46776 699999999974 678999999999999999999999999999753
No 107
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=99.10 E-value=2.8e-09 Score=115.06 Aligned_cols=118 Identities=21% Similarity=0.349 Sum_probs=79.0
Q ss_pred CCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccc-eecCC-CCC--CccccceeecCCceEEEEEeCC
Q 007464 292 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVN-PSL--PPELATFAVLPNIGYFEFIPQR 364 (603)
Q Consensus 292 WP~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaSEg~~-~i~~~-~~~--~~~~~~~~l~~~~~~~EFip~~ 364 (603)
++++| .++.|| .....+++++.++.++++ +.||+||+.. ++... ... .++..|.. .| +.-+++++.+
T Consensus 276 l~~lr---~v~~~G~~l~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~~-~~~~~ivd~~ 349 (417)
T PF00501_consen 276 LSSLR---TVISGGEPLPPDLLRRLRKAFGNAPII-NLYGSTETGSIATIRPPEDDIEKPGSVGKP-LP-GVEVKIVDPN 349 (417)
T ss_dssp GTT-S---EEEEESST-CHHHHHHHHHHHTTSEEE-EEEEEGGGSSEEEEEETTTHHSSTTSEBEE-ST-TEEEEEECTT
T ss_pred ccccc---ccccccccCChhhccccccccccccce-ecccccccceeeeccccccccccccccccc-cc-cccccccccc
Confidence 55688 444444 366777888888655788 9999999754 43221 111 22223332 33 5566777543
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEee
Q 007464 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 427 (603)
Q Consensus 365 ~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR 427 (603)
+++ .++.|+.|||+|++ ..||| +|||||+++++. ...+.++||
T Consensus 350 -----------~~~-----~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~----~G~~~~~GR 409 (417)
T PF00501_consen 350 -----------TGE-----PLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDE----DGYLYILGR 409 (417)
T ss_dssp -----------TSS-----BESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEET----TSEEEEEEE
T ss_pred -----------ccc-----cccccccccccccCCccceeeeccccccccccccccceecceEEEECC----CCeEEEEEe
Confidence 122 45789999999985 35554 599999999984 589999999
Q ss_pred cCceEeee
Q 007464 428 RNLLLTIN 435 (603)
Q Consensus 428 ~~~~i~v~ 435 (603)
.+|+|+++
T Consensus 410 ~~~~i~~~ 417 (417)
T PF00501_consen 410 SDDMIKVR 417 (417)
T ss_dssp GSCEEEET
T ss_pred eCCEEEeC
Confidence 99999874
No 108
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=99.09 E-value=9.2e-10 Score=128.08 Aligned_cols=132 Identities=16% Similarity=0.167 Sum_probs=85.0
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCC-C-CCccccceeecCCceEEEEEeCCCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP-S-LPPELATFAVLPNIGYFEFIPQRLGN 367 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~-~-~~~~~~~~~l~~~~~~~EFip~~~~~ 367 (603)
++++ .+++||. ....+.++..+ + +++ ++||+||+........ . ...+.+|.. .|+ .|+.-.+ +
T Consensus 428 ~~lr---~i~~GGa~l~~~~~~~~~~~~-~-~l~-~~YG~TEt~~~~~~~~~~~~~~~svG~p-~~g---~evkI~d--~ 495 (700)
T PTZ00216 428 GRVR---AMLSGGGPLSAATQEFVNVVF-G-MVI-QGWGLTETVCCGGIQRTGDLEPNAVGQL-LKG---VEMKLLD--T 495 (700)
T ss_pred CcEE---EEEECCCCCCHHHHHHHHHHh-h-hHh-hccCcccccccccccCCCCCCCCCcCCc-CCC---eEEEEee--c
Confidence 4677 6777774 33334444445 4 888 9999999743222111 1 112223332 232 2333322 1
Q ss_pred cccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEeecCc
Q 007464 368 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNL 430 (603)
Q Consensus 368 ~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~ 430 (603)
.+. . ..+.+|..|||+|.. +.||| +|+|||+++++. ...+.|+||.+|
T Consensus 496 ~~~-------~----~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~----dG~l~i~GR~kd 560 (700)
T PTZ00216 496 EEY-------K----HTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIAA----NGTLRIIGRVKA 560 (700)
T ss_pred hhh-------c----cCCCCCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEcC----CCcEEEEEehHh
Confidence 110 0 013456678999965 56777 699999999985 689999999999
Q ss_pred eEe-eeeeecCHHHHHHHHHHH
Q 007464 431 LLT-INIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 431 ~i~-v~Gekv~e~~v~~av~~a 451 (603)
+++ .+|++|.+.+||+++.+.
T Consensus 561 ~ik~~~G~~I~p~eIE~~l~~~ 582 (700)
T PTZ00216 561 LAKNCLGEYIALEALEALYGQN 582 (700)
T ss_pred heecCCCceeccHHHHHHHhcC
Confidence 997 899999999999999753
No 109
>PRK05691 peptide synthase; Validated
Probab=99.08 E-value=4e-09 Score=143.58 Aligned_cols=133 Identities=14% Similarity=0.158 Sum_probs=88.0
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecC---CCCCCcc---ccceeecCCceEEEEEe
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANV---NPSLPPE---LATFAVLPNIGYFEFIP 362 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~---~~~~~~~---~~~~~l~~~~~~~EFip 362 (603)
.++|+ .++.||- ....+++.+.++++.++ +.||.||+.+.+.. +.....+ ..|.. .++...+ .+
T Consensus 3982 ~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p-~~~~~~~-v~- 4054 (4334)
T PRK05691 3982 LDGLR---WMLPTGEAMPPELARQWLQRYPQIGLV-NAYGPAECSDDVAFFRVDLASTRGSYLPIGSP-TDNNRLY-LL- 4054 (4334)
T ss_pred CCCce---EEEecCCcCCHHHHHHHHHhCCCCeEE-eCccCccceeEEEEEEcccccccCCcCCCCCc-cCCCEEE-EE-
Confidence 35788 5666662 33444455556788999 99999998764421 1111110 01221 1222111 11
Q ss_pred CCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee---------------------eceeCCEEEEeceeCC
Q 007464 363 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------------RYRLGDVVKVMGFHNS 418 (603)
Q Consensus 363 ~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~---------------------RYr~GDvvrv~g~~~~ 418 (603)
+ +. .+ .|+.|..|||+|.. ..||+ .|||||+++...
T Consensus 4055 -d--~~--------~~-----~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~---- 4114 (4334)
T PRK05691 4055 -D--EA--------LE-----LVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRS---- 4114 (4334)
T ss_pred -C--CC--------CC-----CCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecC----
Confidence 2 11 12 35789999999976 35555 399999999984
Q ss_pred CCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 419 TPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 419 ~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
...++|+||.++.++++|.+|...|||.+|.+.
T Consensus 4115 dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~ 4147 (4334)
T PRK05691 4115 DGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQ 4147 (4334)
T ss_pred CCcEEEecccCCcEEeceEEecHHHHHHHHHhC
Confidence 678999999999999999999999999998753
No 110
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.08 E-value=3.4e-08 Score=111.08 Aligned_cols=133 Identities=8% Similarity=0.048 Sum_probs=83.9
Q ss_pred CCCCceeeEEeecC---hHHHHHHHHHHhCCCCeeccccccCcccceecCCCCC-------C------ccccceeecCCc
Q 007464 292 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL-------P------PELATFAVLPNI 355 (603)
Q Consensus 292 WP~L~~i~~~~~G~---~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~-------~------~~~~~~~l~~~~ 355 (603)
+++++ .+++|| .....+++++.+ +++++ +.||+||+.......... + ....|..+ | +
T Consensus 292 ~~~l~---~~~~~G~~l~~~~~~~~~~~~-~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~-p-g 364 (539)
T PRK07008 292 FSTLR---RTVIGGSACPPAMIRTFEDEY-GVEVI-HAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVI-Y-G 364 (539)
T ss_pred cccce---EEEEcCCCCCHHHHHHHHHHh-CCcee-cccccccccccceecccccccccCCchhhhhhcccCCccc-c-c
Confidence 46777 555555 355666777777 58999 999999974311111100 0 00111111 1 2
Q ss_pred eEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee----------eceeCCEEEEeceeCCCCEE
Q 007464 356 GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY----------RYRLGDVVKVMGFHNSTPEL 422 (603)
Q Consensus 356 ~~~EFip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~----------RYr~GDvvrv~g~~~~~P~i 422 (603)
.-.++++.+ .+.+.. ..++.|||+++. ..|+| +|+|||+++.+. ...+
T Consensus 365 ~~~~i~d~~------------~~~~~~---~~~~~Gei~v~g~~~~~gy~~~~~~~~~~g~~~TGD~~~~~~----dg~l 425 (539)
T PRK07008 365 VDMKIVGDD------------GRELPW---DGKAFGDLQVRGPWVIDRYFRGDASPLVDGWFPTGDVATIDA----DGFM 425 (539)
T ss_pred eEEEEECCC------------CCccCC---CCCcceEEEEeCCccchhhcCChhhhhcCCCcccCceEEEcC----CCcE
Confidence 223333321 121211 112468999987 24444 499999999975 5789
Q ss_pred EEEeecCceEeeeeeecCHHHHHHHHHH
Q 007464 423 KFICRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 423 ~f~gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
.|+||.+|+++++|+|+++.+||+++..
T Consensus 426 ~~~GR~~d~i~~~G~~v~p~eIE~~l~~ 453 (539)
T PRK07008 426 QITDRSKDVIKSGGEWISSIDIENVAVA 453 (539)
T ss_pred EEeecccCEEEeCCeEEcHHHHHHHHHh
Confidence 9999999999999999999999999875
No 111
>PRK06178 acyl-CoA synthetase; Validated
Probab=99.08 E-value=4e-08 Score=111.05 Aligned_cols=121 Identities=20% Similarity=0.313 Sum_probs=80.7
Q ss_pred HHHHHHHHHHhCCCCeeccccccCcccceecCCC--CC-------CccccceeecCCceEEEEEeCCCCCcccccccCCC
Q 007464 307 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP--SL-------PPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEP 377 (603)
Q Consensus 307 ~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~--~~-------~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~ 377 (603)
....+.+++.+| .+++...||+||......... .. .+...|.. .|+ .-+++++++ +.
T Consensus 341 ~~~~~~~~~~~g-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p-~~g-~~v~v~d~~-----------~~ 406 (567)
T PRK06178 341 PDYRQRWRALTG-SVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLP-VPG-TEFKICDFE-----------TG 406 (567)
T ss_pred HHHHHHHHHHhC-CcccccccccccccccceeccccccCccccccCCcccccc-cCC-cEEEEEcCC-----------CC
Confidence 556667777775 555535799999643221111 00 01112322 232 234555433 11
Q ss_pred ccccccccCCCCeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCH
Q 007464 378 KPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTE 441 (603)
Q Consensus 378 ~~v~l~eve~G~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e 441 (603)
+ .++.|+.|||+|++ ..||| +|+|||+++.++ ...+.|+||.+|+++++|+++++
T Consensus 407 ~-----~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~i~GR~~d~i~~~G~~i~~ 477 (567)
T PRK06178 407 E-----LLPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDE----QGFLHYLGRRKEMLKVNGMSVFP 477 (567)
T ss_pred C-----cCCCCCceEEEEECCcccccccCChhhhhhcccCCceeecceEEEec----CCeEEEEecccccEEECCEEECH
Confidence 2 35678899999966 34544 599999999975 57899999999999999999999
Q ss_pred HHHHHHHHH
Q 007464 442 KDLQLSVDE 450 (603)
Q Consensus 442 ~~v~~av~~ 450 (603)
.+||+++.+
T Consensus 478 ~eiE~~l~~ 486 (567)
T PRK06178 478 SEVEALLGQ 486 (567)
T ss_pred HHHHHHHHh
Confidence 999999875
No 112
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.08 E-value=2.9e-09 Score=122.13 Aligned_cols=128 Identities=22% Similarity=0.332 Sum_probs=78.6
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHH----hC-CCCeeccccccCcccceecCCC-C-CCccccceeecCCceEEEEE
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHY----AG-DLPLMSADYGSSEGWIGANVNP-S-LPPELATFAVLPNIGYFEFI 361 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~----~g-g~~i~~~~YgaSEg~~~i~~~~-~-~~~~~~~~~l~~~~~~~EFi 361 (603)
+++|+ .+++||. ....+.+++. +| +++++ ++||+||+...+.... . ...+..|.. .|+ +|+
T Consensus 345 ~~slr---~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~svG~p-~pg---~~v- 415 (624)
T PRK12582 345 FKNLR---LMAYGGATLSDDLYERMQALAVRTTGHRIPFY-TGYGATETAPTTTGTHWDTERVGLIGLP-LPG---VEL- 415 (624)
T ss_pred hhhee---EEEecCCCCCHHHHHHHHHHHHhhcCCCceEE-eccccccccceeecccCCCCCCCCCCcC-CCC---cEE-
Confidence 56788 6677773 4444555554 33 37888 9999999854322111 0 111112211 111 111
Q ss_pred eCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEE
Q 007464 362 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKF 424 (603)
Q Consensus 362 p~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f 424 (603)
++ ++.|+.|||+|.+ +.||| +|+|||++++.+.......+.|
T Consensus 416 ----------------~i-----~~~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i 474 (624)
T PRK12582 416 ----------------KL-----APVGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIF 474 (624)
T ss_pred ----------------EE-----ccCCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEE
Confidence 11 2458889999966 46776 4999999998431112357899
Q ss_pred EeecCceEee-eeeecCHHHHH--HHHH
Q 007464 425 ICRRNLLLTI-NIDKNTEKDLQ--LSVD 449 (603)
Q Consensus 425 ~gR~~~~i~v-~Gekv~e~~v~--~av~ 449 (603)
+||.+|++++ +|+||++.++| .++.
T Consensus 475 ~GR~~d~i~~~~G~~i~p~~iE~e~~l~ 502 (624)
T PRK12582 475 DGRVAEDFKLSTGTWVSVGTLRPDAVAA 502 (624)
T ss_pred eccchhhEecCCCcEechHHHHHHHHHh
Confidence 9999999885 79999988885 4444
No 113
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.07 E-value=3.2e-08 Score=112.18 Aligned_cols=131 Identities=18% Similarity=0.127 Sum_probs=83.9
Q ss_pred CCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCC-CCC---C------ccccceeecCCceEEEE
Q 007464 294 NAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PSL---P------PELATFAVLPNIGYFEF 360 (603)
Q Consensus 294 ~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~-~~~---~------~~~~~~~l~~~~~~~EF 360 (603)
+++ +++.||. ....+++++.+ +++++ +.||+||+....... +.. . ....+. .+.+.-++.
T Consensus 299 ~l~---~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~--~~~~~~~~i 371 (576)
T PRK05620 299 SLQ---EIYVGGSAVPPILIKAWEERY-GVDVV-HVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGR--FPASLEYRI 371 (576)
T ss_pred cee---EEEEcCCCCCHHHHHHHHHHh-CCcee-eeccccccccceeeeccCCccccccccccccccCC--cCCceeEEE
Confidence 677 6666663 55556677767 58998 999999974321111 100 0 000111 112222333
Q ss_pred EeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee------------------------------eceeC
Q 007464 361 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY------------------------------RYRLG 407 (603)
Q Consensus 361 ip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~------------------------------RYr~G 407 (603)
++. + ..+ +...|+.|||++++ +.||| +|+||
T Consensus 372 ~~~-----g--------~~~---~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TG 435 (576)
T PRK05620 372 VND-----G--------QVM---ESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTG 435 (576)
T ss_pred ecC-----C--------ccc---cCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecC
Confidence 321 1 111 11346789999976 24443 59999
Q ss_pred CEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 408 DVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 408 Dvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
|+++++. ...+.|+||.++++++.|++|++.+||++|.+.
T Consensus 436 D~~~~~~----dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~ 475 (576)
T PRK05620 436 DVGSVTR----DGFLTIHDRARDVIRSGGEWIYSAQLENYIMAA 475 (576)
T ss_pred ceEEEcC----CceEEEEechhhhhhcCCEEEcHHHHHHHHhcC
Confidence 9999875 678999999999999999999999999999753
No 114
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=99.01 E-value=9.2e-08 Score=107.57 Aligned_cols=132 Identities=14% Similarity=0.135 Sum_probs=84.1
Q ss_pred CCCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCc-------------cccceeecCCc
Q 007464 292 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPP-------------ELATFAVLPNI 355 (603)
Q Consensus 292 WP~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~~~-------------~~~~~~l~~~~ 355 (603)
.|+++ .+++||. ...++.+++ + +++++ +.||+||+..........++ ...+..+ +
T Consensus 293 ~~~lr---~~~~~G~~l~~~~~~~~~~-~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~-- 363 (542)
T PRK06018 293 LPHLK---MVVCGGSAMPRSMIKAFED-M-GVEVR-HAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPP-F-- 363 (542)
T ss_pred cccce---EEEEcCCCCCHHHHHHHHH-h-CCCeE-eeecccccCcccccccCccccccCCchhhhhccccCCCCC-C--
Confidence 47788 6666662 556677877 6 68999 99999997432211110000 0011111 1
Q ss_pred eEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee-----------eceeCCEEEEeceeCCCCE
Q 007464 356 GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------RYRLGDVVKVMGFHNSTPE 421 (603)
Q Consensus 356 ~~~EFip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~-----------RYr~GDvvrv~g~~~~~P~ 421 (603)
..|+...+ + +++.++. ..+..|||++.. ..|+| +|+|||+++.+. ...
T Consensus 364 -g~~i~v~d--~--------~~~~~~~---~~~~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~~TGDl~~~~~----~g~ 425 (542)
T PRK06018 364 -GVEMKITD--D--------AGKELPW---DGKTFGRLKVRGPAVAAAYYRVDGEILDDDGFFDTGDVATIDA----YGY 425 (542)
T ss_pred -CcEEEEEC--C--------CCCCCCC---CCCceeEEEEecCCcchhhhcCcccEecCCcEEEcCCEEEEcC----Ccc
Confidence 12333322 1 1222211 113578999964 35565 499999999874 568
Q ss_pred EEEEeecCceEeeeeeecCHHHHHHHHHH
Q 007464 422 LKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 422 i~f~gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
+.|+||.+|+++++|+++++.+|+.++.+
T Consensus 426 ~~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 454 (542)
T PRK06018 426 MRITDRSKDVIKSGGEWISSIDLENLAVG 454 (542)
T ss_pred EEEEecCCCeEEECCEEECHHHHHHHHHh
Confidence 99999999999999999999999998875
No 115
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=99.01 E-value=4.1e-09 Score=118.56 Aligned_cols=134 Identities=19% Similarity=0.221 Sum_probs=92.0
Q ss_pred ccCCCCceeeEEeecChH---HHHHHHHHHhCCCCeeccccccCcccceecCC-CCC-CccccceeecCCceEEEEEeCC
Q 007464 290 ELFPNAKYLSGIMTGSME---HYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PSL-PPELATFAVLPNIGYFEFIPQR 364 (603)
Q Consensus 290 ~lWP~L~~i~~~~~G~~~---~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~-~~~-~~~~~~~~l~~~~~~~EFip~~ 364 (603)
.|++|.+ .+++|+++ ....-++..+ |++++ ++||.||+..|.... +.+ ..+++|-.+ |. +-+=+++++
T Consensus 416 ~LGg~vr---~~~sGaAPls~ev~~F~r~~~-g~~v~-eGYGlTEts~g~~~~~~~d~~lgsvG~p~-p~-~~vKL~dvp 488 (691)
T KOG1256|consen 416 SLGGNVR---LIISGAAPLSPEVLTFFRAAL-GCRVL-EGYGLTETSAGTTLTLPGDNVLGSVGPPV-PG-NEVKLVDVP 488 (691)
T ss_pred HhcCcee---EEEecCCCCCHHHHHHHHHhc-Cceee-ecccccccCCceEeccCCCCCCCCcCCcc-cC-ceEEEechH
Confidence 4667888 88999853 2322233334 69999 999999987444322 212 133344332 22 223333333
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------eceeCCEEEEeceeCCCCEEEEEee
Q 007464 365 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 427 (603)
Q Consensus 365 ~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR 427 (603)
|.+ --..|..|||.|.. +.||| |.+|||+++++. .+.+.++||
T Consensus 489 --e~n--------------y~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p----~G~l~IidR 548 (691)
T KOG1256|consen 489 --EMN--------------YDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDP----NGTLKIIDR 548 (691)
T ss_pred --HhC--------------cCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECC----CccEEEEec
Confidence 221 11346689999955 79999 899999999996 789999999
Q ss_pred cCceEeee-eeecCHHHHHHHHHH
Q 007464 428 RNLLLTIN-IDKNTEKDLQLSVDE 450 (603)
Q Consensus 428 ~~~~i~v~-Gekv~e~~v~~av~~ 450 (603)
.++++++. ||.|.+..||++..+
T Consensus 549 kK~ifklaqGEyVaPe~IEniy~~ 572 (691)
T KOG1256|consen 549 KKNIFKLAQGEYVAPEKIENIYKR 572 (691)
T ss_pred ccceEEcCCCCccChHHHHHHHhc
Confidence 99998875 899999999999986
No 116
>PRK08162 acyl-CoA synthetase; Validated
Probab=98.93 E-value=1e-07 Score=107.01 Aligned_cols=59 Identities=12% Similarity=0.129 Sum_probs=51.2
Q ss_pred CeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 389 EEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 389 ~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
+.|||+|++ +.|+| +|+|||+++.+. ...+.|+||.+++++++|+++++.+||.+|.+.
T Consensus 387 ~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~----dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~ 461 (545)
T PRK08162 387 TIGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHP----DGYIKIKDRSKDIIISGGENISSIEVEDVLYRH 461 (545)
T ss_pred ceeEEEEecCcchhhhcCChhhhHHHhhCCCcccCceEEEcC----CccEEEEecccceEEeCCEEECHHHHHHHHHhC
Confidence 369999987 35665 599999999985 578999999999999999999999999999753
No 117
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.92 E-value=2.2e-07 Score=102.16 Aligned_cols=44 Identities=11% Similarity=0.118 Sum_probs=40.1
Q ss_pred eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 403 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 403 RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
+|+|||+++++ ...+.|+||.+|++++.|+++++.+||++|.+.
T Consensus 333 ~~~TGD~~~~~-----~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~ 376 (458)
T PRK09029 333 WFATRDRGEWQ-----NGELTILGRLDNLFFSGGEGIQPEEIERVINQH 376 (458)
T ss_pred ccCCCCcEEEe-----CCEEEEecccccceeeCCEEeCHHHHHHHHhcC
Confidence 69999999987 367999999999999999999999999999753
No 118
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=98.90 E-value=2.4e-08 Score=114.27 Aligned_cols=65 Identities=28% Similarity=0.316 Sum_probs=55.4
Q ss_pred ccCCCCeEEEEEcc---cccee--------------------------------eceeCCEEEEeceeCCCCEEEEEeec
Q 007464 384 EVKVGEEYEIIVTN---VAGLY--------------------------------RYRLGDVVKVMGFHNSTPELKFICRR 428 (603)
Q Consensus 384 eve~G~~yELVvTt---~~GL~--------------------------------RYr~GDvvrv~g~~~~~P~i~f~gR~ 428 (603)
++++|+.|||+|.. +.||| +|+|||++++. ...+.|+||.
T Consensus 423 ~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-----dG~l~i~GR~ 497 (612)
T PRK12476 423 ELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-----DGELYITGRI 497 (612)
T ss_pred CCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-----CCEEEEEecc
Confidence 56789999999966 35655 79999999864 4689999999
Q ss_pred CceEeeeeeecCHHHHHHHHHHHHH
Q 007464 429 NLLLTINIDKNTEKDLQLSVDEAAQ 453 (603)
Q Consensus 429 ~~~i~v~Gekv~e~~v~~av~~a~~ 453 (603)
+|+|+++|++|++.+||++|.+..+
T Consensus 498 ~d~I~~~G~~I~p~eIE~~l~~~~p 522 (612)
T PRK12476 498 ADLIVIDGRNHYPQDIEATVAEASP 522 (612)
T ss_pred CcEEEECCcccCHHHHHHHHHHhcc
Confidence 9999999999999999999986533
No 119
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.90 E-value=1.2e-07 Score=106.96 Aligned_cols=231 Identities=13% Similarity=0.070 Sum_probs=131.5
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCccc-ceecCCCCC-CccccceeecCCc-eEEEEEeCCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGW-IGANVNPSL-PPELATFAVLPNI-GYFEFIPQRLG 366 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~-~~i~~~~~~-~~~~~~~~l~~~~-~~~EFip~~~~ 366 (603)
+.|+ ++.++|- ..-.+.+.+.++.-||. +.|++||.. .-+...+.. |. ..+..-.|.. ..++.++++
T Consensus 359 ~sLk---~~~S~Gepi~~~~~ew~~~~~~~~pv~-e~~~qtEtG~~~i~~~~g~~p~-~pg~~~~p~~g~~v~i~de~-- 431 (626)
T KOG1175|consen 359 KSLR---TCGSVGEPINPEAWEWWKRVTGLDPIY-ETYGQTETGGICITPKPGKLPI-KPGSAGKPFPGYDVQILDEN-- 431 (626)
T ss_pred ceEE---EEeecCccCCcchHHHHHHhcCccchh-hceeeeccCceeeeccCCCCCc-CccccCCCCCCcceEEECCC--
Confidence 4577 7777662 33335566667433677 999999963 333222222 11 1122222222 233333322
Q ss_pred CcccccccCCCccccccccCCC-CeEEEEEccc------cceee----------------ceeCCEEEEeceeCCCCEEE
Q 007464 367 NLESQVLCIEPKPVGLTEVKVG-EEYEIIVTNV------AGLYR----------------YRLGDVVKVMGFHNSTPELK 423 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G-~~yELVvTt~------~GL~R----------------Yr~GDvvrv~g~~~~~P~i~ 423 (603)
+. +++.+ +.+||+++.. .++|. |.|||-++.+. .+.+.
T Consensus 432 ----------g~-----~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~----dGY~~ 492 (626)
T KOG1175|consen 432 ----------GN-----ELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDE----DGYYW 492 (626)
T ss_pred ----------CC-----CcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcC----CceEE
Confidence 22 34444 7899999652 33442 99999999994 89999
Q ss_pred EEeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEE-EEEEeccCCCHHHHHHHHHHHHH
Q 007464 424 FICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYV-IFWEVSGEVNDEVLKECCNCLDR 502 (603)
Q Consensus 424 f~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~hy~-l~vE~~~~~~~~~l~~~~~~ld~ 502 (603)
+.||.||+||+.|-+++..|||+||.+.-. |.|=.|+.-.....|.-+ .||=+..+ .+..+++.++|..
T Consensus 493 i~GR~DDviNvsGhRigtaEIE~al~~hp~--------VaEsAvVg~p~~~~ge~v~aFvvl~~g--~~~~~~L~kel~~ 562 (626)
T KOG1175|consen 493 ILGRVDDVINVSGHRIGTAEIESALVEHPA--------VAESAVVGSPDPIKGEVVLAFVVLKSG--SHDPEQLTKELVK 562 (626)
T ss_pred EEecccccccccceeecHHHHHHHHhhCcc--------hhheeeecCCCCCCCeEEEEEEEEcCC--CCChHHHHHHHHH
Confidence 999999999999999999999999965311 223333321111123333 55555433 1233333344444
Q ss_pred hccChhhHHHhhcCCcCCeE-EEEe---ccChHHHHHHHHhcCCCCCCCCCcCcccCCCCHHHHHHHhcc
Q 007464 503 SFVDAGYVSARKVNAIGPLE-LRVV---LKGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCNN 568 (603)
Q Consensus 503 ~L~n~~Y~~~R~~g~l~p~~-v~~v---~~GtF~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~~ 568 (603)
.+ +...|-+.-|+ |..| +.=..-+.|+.++.+-.+.-|++-.-.+. |++.++.+.+.
T Consensus 563 ~V-------R~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~~~~d~st~~--dp~v~~~~~~~ 623 (626)
T KOG1175|consen 563 HV-------RSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGKAVGDTSTLA--DPSVIDHLRSI 623 (626)
T ss_pred HH-------HhhcCcccccceeEecCCCCccccchhHHHHHHHHhccCccccccccC--ChHHHHHHHHh
Confidence 33 01233333333 3333 22234556666665433333888888888 99999998864
No 120
>PRK13391 acyl-CoA synthetase; Provisional
Probab=98.80 E-value=1.9e-07 Score=104.09 Aligned_cols=130 Identities=11% Similarity=0.034 Sum_probs=88.3
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC-C--CccccceeecCCceEEEEEeCCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS-L--PPELATFAVLPNIGYFEFIPQRLG 366 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~-~--~~~~~~~~l~~~~~~~EFip~~~~ 366 (603)
++++ .+++||. ....+.+++.+ |.+++ +.||+||+......... + .++.+|..+ ++ ..++++.+
T Consensus 275 ~~l~---~~~~gg~~~~~~~~~~~~~~~-g~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~-~g--~~~i~d~~-- 344 (511)
T PRK13391 275 SSLE---VAIHAAAPCPPQVKEQMIDWW-GPIIH-EYYAATEGLGFTACDSEEWLAHPGTVGRAM-FG--DLHILDDD-- 344 (511)
T ss_pred ccee---EEEEccCCCCHHHHHHHHHHc-CCcee-eeeccccccceEEecCccccccCCCcCCcc-cc--eEEEECCC--
Confidence 3677 6666662 55666777878 47787 99999997532211111 1 112233322 22 34444422
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEccc--ccee---------------eceeCCEEEEeceeCCCCEEEEEeecC
Q 007464 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV--AGLY---------------RYRLGDVVKVMGFHNSTPELKFICRRN 429 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~--~GL~---------------RYr~GDvvrv~g~~~~~P~i~f~gR~~ 429 (603)
++ .++.|+.|||++.+. .|+| +|+|||+++.+. ...+.|+||.+
T Consensus 345 ----------~~-----~~~~g~~Gel~~~g~~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~----~g~l~~~gR~~ 405 (511)
T PRK13391 345 ----------GA-----ELPPGEPGTIWFEGGRPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDE----DGYLYLTDRAA 405 (511)
T ss_pred ----------CC-----CCCCCCceEEEEecCcceEEcCChhHhHHhhccCCCEEecCCEEEECC----CccEEEeccCC
Confidence 12 346789999999772 3343 689999999875 67899999999
Q ss_pred ceEeeeeeecCHHHHHHHHHHH
Q 007464 430 LLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 430 ~~i~v~Gekv~e~~v~~av~~a 451 (603)
|+++++|+++++.+|+++|.+.
T Consensus 406 ~~i~~~G~~v~~~eie~~l~~~ 427 (511)
T PRK13391 406 FMIISGGVNIYPQEAENLLITH 427 (511)
T ss_pred CEEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999753
No 121
>PLN02479 acetate-CoA ligase
Probab=98.79 E-value=1.4e-07 Score=106.94 Aligned_cols=58 Identities=12% Similarity=0.109 Sum_probs=50.9
Q ss_pred CeEEEEEcc---cccee-------------eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHH
Q 007464 389 EEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 389 ~~yELVvTt---~~GL~-------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
+.|||+|+. +.||| +|+|||+++++. ...+.|+||.+|++++.|+++++.+|+.++.+
T Consensus 401 ~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 474 (567)
T PLN02479 401 TMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKHP----DGYIEIKDRSKDIIISGGENISSLEVENVVYT 474 (567)
T ss_pred CceEEEEeccchhhhhhcCcccccchhcCCceecceeEEEcC----CccEEEeccccceEEeCCEEEcHHHHHHHHHh
Confidence 579999976 35666 699999999874 67899999999999999999999999999975
No 122
>PRK13390 acyl-CoA synthetase; Provisional
Probab=98.75 E-value=6.4e-07 Score=99.50 Aligned_cols=129 Identities=9% Similarity=0.065 Sum_probs=87.1
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC-C--CccccceeecCCceEEEEEeCCCC
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS-L--PPELATFAVLPNIGYFEFIPQRLG 366 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~-~--~~~~~~~~l~~~~~~~EFip~~~~ 366 (603)
++++ .+++||. ....+.+++++ +.+++ +.||+||+......+.. . .++..+.. .++ . .+.++.+
T Consensus 270 ~~l~---~v~~~g~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~~g-~-~~i~d~~-- 339 (501)
T PRK13390 270 SSLR---AVIHAAAPCPVDVKHAMIDWL-GPIVY-EYYSSTEAHGMTFIDSPDWLAHPGSVGRS-VLG-D-LHICDDD-- 339 (501)
T ss_pred hhhh---eEEEcCCCCCHHHHHHHHHhc-CCcee-eeecccccCceEEecchhhccCCCCcCCc-ccc-e-EEEECCC--
Confidence 4677 6666663 44556667777 47888 89999997432111111 1 11122332 222 2 3333321
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEccc---ccee----------------eceeCCEEEEeceeCCCCEEEEEee
Q 007464 367 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY----------------RYRLGDVVKVMGFHNSTPELKFICR 427 (603)
Q Consensus 367 ~~~~~~~~~~~~~v~l~eve~G~~yELVvTt~---~GL~----------------RYr~GDvvrv~g~~~~~P~i~f~gR 427 (603)
++ .+++|+.|||+|.+. .|+| +|+|||+++++. ...+.|.||
T Consensus 340 ----------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~----dg~l~~~gR 400 (501)
T PRK13390 340 ----------GN-----ELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDE----DGYLYLADR 400 (501)
T ss_pred ----------CC-----CCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECC----CCeEEEeec
Confidence 22 356899999999763 4453 679999999985 678999999
Q ss_pred cCceEeeeeeecCHHHHHHHHHH
Q 007464 428 RNLLLTINIDKNTEKDLQLSVDE 450 (603)
Q Consensus 428 ~~~~i~v~Gekv~e~~v~~av~~ 450 (603)
.+++++++|++|++.+||++|..
T Consensus 401 ~~~~i~~~G~~v~p~eIE~~l~~ 423 (501)
T PRK13390 401 KSFMIISGGVNIYPQETENALTM 423 (501)
T ss_pred cccceeECCeeeCHHHHHHHHHh
Confidence 99999999999999999999964
No 123
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.74 E-value=1.7e-07 Score=113.37 Aligned_cols=147 Identities=7% Similarity=-0.001 Sum_probs=91.6
Q ss_pred CCCCceeeEEeecCh-HHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCccccceeecCCceEEEEEeCCCCCccc
Q 007464 292 FPNAKYLSGIMTGSM-EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 370 (603)
Q Consensus 292 WP~L~~i~~~~~G~~-~~y~~~l~~~~gg~~i~~~~YgaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~ 370 (603)
.+.++ .+.+|++ ....+++.+.+++++++ +.||+||+.+.+...+...++..|..+ |+..-++..+.+ .+.++
T Consensus 719 ~~slr---~~~g~gl~~~l~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~svG~p~-pg~~~v~i~~~d-~~~g~ 792 (994)
T PRK07868 719 NHPVR---LFIGSGMPTGLWERVVEAFAPAHVV-EFFATTDGQAVLANVSGAKIGSKGRPL-PGAGRVELAAYD-PEHDL 792 (994)
T ss_pred CCceE---EEecCCCCHHHHHHHHHHhCchhee-eeeecccccccccccCCCCCcccCCcc-CCCCceeEEEec-CcCCc
Confidence 34677 4445554 55666777888778898 999999985432211111222344432 332123332211 00000
Q ss_pred ccccCCCccccccccCCCCeEEEEEccc----------cce-----eeceeCCEEEEeceeCCCCEEEEEeecCceEeee
Q 007464 371 QVLCIEPKPVGLTEVKVGEEYEIIVTNV----------AGL-----YRYRLGDVVKVMGFHNSTPELKFICRRNLLLTIN 435 (603)
Q Consensus 371 ~~~~~~~~~v~l~eve~G~~yELVvTt~----------~GL-----~RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~ 435 (603)
-.-++++. +.++++|+.|||++... .|. =+|+|||+++++. ...+.|+||.+++|+++
T Consensus 793 li~d~~G~---~~~~~~ge~Gel~~~~~~~~~p~~t~~~~~~~~~dgw~~TGDlg~~d~----dG~l~~~GR~dd~Ik~~ 865 (994)
T PRK07868 793 ILEDDRGF---VRRAEVNEVGVLLARARGPIDPTASVKRGVFAPADTWISTEYLFRRDD----DGDYWLVDRRGSVIRTA 865 (994)
T ss_pred eeecCCce---EEEcCCCCceEEEEecCCCCChhhhhHhcccccCCEEEeccceEEEcC----CCCEEEeccCCCEEEeC
Confidence 00000110 12467899999998642 222 3699999999985 78999999999999999
Q ss_pred eeecCHHHHHHHHHHH
Q 007464 436 IDKNTEKDLQLSVDEA 451 (603)
Q Consensus 436 Gekv~e~~v~~av~~a 451 (603)
|++|++.|||++|.+.
T Consensus 866 G~~I~p~EIE~~L~~h 881 (994)
T PRK07868 866 RGPVYTEPVTDALGRI 881 (994)
T ss_pred CceEcHHHHHHHHhcC
Confidence 9999999999999863
No 124
>PRK07798 acyl-CoA synthetase; Validated
Probab=98.70 E-value=6.5e-07 Score=99.61 Aligned_cols=133 Identities=14% Similarity=0.084 Sum_probs=86.0
Q ss_pred CCCceeeEEeecCh---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCCCCCccccceeecCCceEEEEEeCCCCCc
Q 007464 293 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 368 (603)
Q Consensus 293 P~L~~i~~~~~G~~---~~y~~~l~~~~gg~~i~~~~YgaSEg~~-~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~ 368 (603)
++++ .+.+||. ....+++++.+++++++ +.||+||... +......++....+-...+. .-++.++.+
T Consensus 296 ~~l~---~i~~gG~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~g~~~~~~~-~~~~i~~~~---- 366 (533)
T PRK07798 296 SSLF---AIASGGALFSPSVKEALLELLPNVVLT-DSIGSSETGFGGSGTVAKGAVHTGGPRFTIG-PRTVVLDED---- 366 (533)
T ss_pred CceE---EEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccccccCCCCCCccCCCCccCCC-ceEEEECCC----
Confidence 4667 6777773 55556677778778898 9999999633 32221111111111011122 234444332
Q ss_pred ccccccCCCccccccccCCCCe--EEEEEccc--c-----------------ceeeceeCCEEEEeceeCCCCEEEEEee
Q 007464 369 ESQVLCIEPKPVGLTEVKVGEE--YEIIVTNV--A-----------------GLYRYRLGDVVKVMGFHNSTPELKFICR 427 (603)
Q Consensus 369 ~~~~~~~~~~~v~l~eve~G~~--yELVvTt~--~-----------------GL~RYr~GDvvrv~g~~~~~P~i~f~gR 427 (603)
++ .+++|+. ++++.+.. . |-.+|+|||+++++. ...+.|+||
T Consensus 367 --------~~-----~~~~g~~~~g~l~~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~----~g~l~~~GR 429 (533)
T PRK07798 367 --------GN-----PVEPGSGEIGWIARRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEA----DGTITLLGR 429 (533)
T ss_pred --------CC-----CCCCCCCCeeEEEeecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcC----CCcEEEEcc
Confidence 12 3355666 78877542 2 223689999999985 678999999
Q ss_pred cCceEeeeeeecCHHHHHHHHHHH
Q 007464 428 RNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 428 ~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
.+++++++|++|++.+|++++.+.
T Consensus 430 ~~~~i~~~G~~v~~~eIE~~l~~~ 453 (533)
T PRK07798 430 GSVCINTGGEKVFPEEVEEALKAH 453 (533)
T ss_pred ccceEecCCEEeCHHHHHHHHHhC
Confidence 999999999999999999998753
No 125
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=98.68 E-value=2.7e-07 Score=101.92 Aligned_cols=61 Identities=10% Similarity=0.149 Sum_probs=52.6
Q ss_pred CCCeEEEEEcc---cccee--------eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 387 VGEEYEIIVTN---VAGLY--------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 387 ~G~~yELVvTt---~~GL~--------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
.|+.|||+|.+ +.|+| +|+|||+++++. ...+.|+||.+|+|+++|+||++.+||+++.+.
T Consensus 298 ~g~~Gel~v~g~~~~~gY~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~ 369 (452)
T PRK07445 298 ANQTGNITIQAQSLALGYYPQILDSQGIFETDDLGYLDA----QGYLHILGRNSQKIITGGENVYPAEVEAAILAT 369 (452)
T ss_pred CCCcceEEEeCCccchhhcCCccCCCCEEECCCEEEEcC----CCCEEEEeecCCEEEECCEEECHHHHHHHHHhC
Confidence 48899999954 45655 499999999874 678999999999999999999999999999863
No 126
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=98.67 E-value=1e-06 Score=95.62 Aligned_cols=45 Identities=11% Similarity=0.128 Sum_probs=41.0
Q ss_pred eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 403 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 403 RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
+|+|||+++.+. ...+.|+||.+|+|+++|+||++.+||+++.+.
T Consensus 276 ~~~tgD~g~~d~----~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~ 320 (386)
T TIGR02372 276 RLDLQDRLAWDK----DGGFTILGRKDEILQVGGVNVSPGHVRDILERN 320 (386)
T ss_pred eeecCceEEEcC----CCcEEEecccCCEEEECCEEEcHHHHHHHHHcC
Confidence 478999999875 689999999999999999999999999999863
No 127
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.55 E-value=3.8e-06 Score=91.85 Aligned_cols=161 Identities=17% Similarity=0.180 Sum_probs=102.2
Q ss_pred CHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecCh--HHHHHHHHHHhCCCCeeccccccCcc-cceecCCCCCC
Q 007464 267 NPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSM--EHYLKKLRHYAGDLPLMSADYGSSEG-WIGANVNPSLP 343 (603)
Q Consensus 267 ~p~~A~~l~~~~~~~~~~~gi~~~lWP~L~~i~~~~~G~~--~~y~~~l~~~~gg~~i~~~~YgaSEg-~~~i~~~~~~~ 343 (603)
+--..++|++..+. +|| -+.+||+ .+-.+++--.+=.+|+. .+||.||. .-|.-.++.+.
T Consensus 389 d~lVFkKIr~~lGG-------------~lR---~~LsGGapLS~dtQrF~nic~C~Pv~-qGYGLTEtca~~tv~e~~d~ 451 (678)
T KOG1180|consen 389 DALVFKKIRALLGG-------------NLR---YILSGGAPLSPDTQRFMNICFCCPVL-QGYGLTETCAAATVLEPEDF 451 (678)
T ss_pred HHHHHHHHHHHhCC-------------ceE---EEEeCCCCCCHHHHHHHHHhcccccc-ccccccchhcccEecChhhc
Confidence 44567888877553 578 6788885 33334444433246998 99999995 44555555542
Q ss_pred -ccccceeecCCceEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee-----------------
Q 007464 344 -PELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY----------------- 402 (603)
Q Consensus 344 -~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~v~l~eve~G~~yELVvTt---~~GL~----------------- 402 (603)
.+.+|-.+ ..+.+-.++.+ |.+ ..+. + .+ =+|||+|+. ..|||
T Consensus 452 ~~g~vG~pl--~c~eiKLvdw~--EgG-----Y~~~-----~-~P-PrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~ 515 (678)
T KOG1180|consen 452 STGRVGAPL--PCCEIKLVDWE--EGG-----YFAK-----N-KP-PRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQR 515 (678)
T ss_pred ccccccCCc--cceEEEEEEhh--hcC-----ccCC-----C-CC-CCceEEecCCccChhhhCChhhhhhhceecCCcE
Confidence 22233221 12344445544 211 1111 0 11 257888865 25555
Q ss_pred eceeCCEEEEeceeCCCCEEEEEeecCceEee-eeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCC
Q 007464 403 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTI-NIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLS 472 (603)
Q Consensus 403 RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v-~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~ 472 (603)
||+||||++++. ..++++++|++|+.++ +||-|+=.-||.++... --|-+-++++|..
T Consensus 516 WF~TGDIGe~~p----dG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~--------p~V~NICvyAd~~ 574 (678)
T KOG1180|consen 516 WFRTGDIGEFHP----DGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSS--------PYVDNICVYADSN 574 (678)
T ss_pred EEeccccceecC----CCcEEEeechhhhhhhcccceeehHHHHHHHhcC--------cchhheEEecccc
Confidence 899999999994 7899999999999775 79999999999988743 1234667888854
No 128
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.27 E-value=3.4e-05 Score=83.01 Aligned_cols=81 Identities=15% Similarity=0.244 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHH-ccCChhhHhc----CCCCCCChhhhhhcCCCcccccchHHHHHHhcCCCCCCccCCCcceeecccc
Q 007464 26 RIQRETLRKILEE-NASAEYLQNL----GLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSG 100 (603)
Q Consensus 26 ~~Q~~~L~~iL~~-n~~T~ygr~~----gf~~i~s~~dF~~~vPv~~Yed~~p~ieR~~~Ge~~~lL~~~pi~~f~~TSG 100 (603)
+...+.++++.+. .++++.||++ |++ .+++++. .+|.+--.-++. ..+.... .+.+.....|||
T Consensus 31 ~l~~~~~~~~~~~q~~~~~~Yr~~~~~~~~~--~~v~~~~-dIP~lPi~~FK~--~~L~S~~------~e~~~~~~tSSG 99 (365)
T PF04443_consen 31 ELFLALALELFRYQYEHNPPYRKYCDALGFD--EDVKDLE-DIPFLPIRFFKE--HELLSVP------EEEVEKVFTSSG 99 (365)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHcCCC--cccccHH-HCCcchHHHHhh--ceeeecC------hhhheeEEECCC
Confidence 3444556666665 7899999986 665 5566665 588887666663 1122221 234667789999
Q ss_pred CCCCCcccccCChHHHHH
Q 007464 101 TTQGKPKFLPFNDELMET 118 (603)
Q Consensus 101 TT~G~~K~IP~t~~~l~~ 118 (603)
|| |.+-.|......+..
T Consensus 100 Tt-G~~S~i~~D~~t~~~ 116 (365)
T PF04443_consen 100 TT-GQPSRIFRDRETAER 116 (365)
T ss_pred CC-CCCcEEEECHHHHHH
Confidence 99 666667776655543
No 129
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=98.08 E-value=9e-05 Score=81.62 Aligned_cols=224 Identities=15% Similarity=0.152 Sum_probs=133.1
Q ss_pred hHHHHHHHHHHhCCCCeeccccccCcccce-ecCCCCCCcccccee--ecCCceEEEEEeCCCCCcccccccCCCccccc
Q 007464 306 MEHYLKKLRHYAGDLPLMSADYGSSEGWIG-ANVNPSLPPELATFA--VLPNIGYFEFIPQRLGNLESQVLCIEPKPVGL 382 (603)
Q Consensus 306 ~~~y~~~l~~~~gg~~i~~~~YgaSEg~~~-i~~~~~~~~~~~~~~--l~~~~~~~EFip~~~~~~~~~~~~~~~~~v~l 382 (603)
-++..+.+.+.|| .+...+.||+|||-++ +|.+...-+ .|+. +..-..=++.|-.|. +.+++-.++++--
T Consensus 368 R~diW~~Fv~RFg-~~~IgE~YgaTEgn~~~~N~d~~vGA--~G~~~~~~~~l~p~~LIk~D~-~t~E~iRd~~G~C--- 440 (649)
T KOG1179|consen 368 RPDIWQQFVKRFG-IIKIGEFYGATEGNSNLVNYDGRVGA--CGFMSRLLKLLYPFRLIKVDP-ETGEPIRDSQGLC--- 440 (649)
T ss_pred CchHHHHHHHHcC-CCeEEEEeccccCcceeeeecCcccc--ccchhhhhhhccceEEEEecC-CCCceeecCCceE---
Confidence 3445566778885 5544499999999664 455433211 1221 111112266666541 1111101112211
Q ss_pred cccCCCCeEEEEE--------cccccee--------------------eceeCCEEEEeceeCCCCEEEEEeecCceEee
Q 007464 383 TEVKVGEEYEIIV--------TNVAGLY--------------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTI 434 (603)
Q Consensus 383 ~eve~G~~yELVv--------Tt~~GL~--------------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v 434 (603)
..+++||.|.||- +.+.|+- .|++||++..+. -..+.|.+|.+|..--
T Consensus 441 i~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~----~GylYF~DRtGDTFRW 516 (649)
T KOG1179|consen 441 IPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADE----LGYLYFKDRTGDTFRW 516 (649)
T ss_pred EECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEec----CCcEEEeccCCCceee
Confidence 2468999997773 2244432 499999999986 6899999999999999
Q ss_pred eeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEee-cCCCCCceEEEEEEeccCCCHHHHHHHHHHHHHhccChhhHHHh
Q 007464 435 NIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHV-DLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSFVDAGYVSAR 513 (603)
Q Consensus 435 ~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~-~~~~~~~hy~l~vE~~~~~~~~~l~~~~~~ld~~L~n~~Y~~~R 513 (603)
.||||+-.||++.+..... + .++.-|-+.. ..+++.|-=.+..+ +..+-+++++-..+...| |.|+.=|
T Consensus 517 KGENVsTtEVe~~l~~~~~-~----~dv~VYGV~VP~~EGRaGMAaI~~~---p~~~~d~~~l~~~l~~~L--P~YA~P~ 586 (649)
T KOG1179|consen 517 KGENVSTTEVEDVLSALDF-L----QDVNVYGVTVPGYEGRAGMAAIVLD---PTTEKDLEKLYQHLRENL--PSYARPR 586 (649)
T ss_pred cCCcccHHHHHHHHhhhcc-c----cceeEEEEecCCccCccceEEEEec---CcccchHHHHHHHHHhhC--ccccchH
Confidence 9999999999998886532 1 1222344332 33333332223321 223335666666677665 6777766
Q ss_pred hcCCcCCeEEEEeccChHHHHHHHHhcCCCCCCCCCcCccc
Q 007464 514 KVNAIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCV 554 (603)
Q Consensus 514 ~~g~l~p~~v~~v~~GtF~~~~~~~~~~G~~~~Q~K~Pr~~ 554 (603)
......-++ .-|||..-....++.|-..++.+-|--+
T Consensus 587 FlRl~~~i~----~TgTFKl~K~~L~~egf~p~~~~dply~ 623 (649)
T KOG1179|consen 587 FLRLQDEIE----KTGTFKLQKTELQKEGFNPAIISDPLYY 623 (649)
T ss_pred HHHHHhhhh----cccchhhHHHHHHHccCCccccCCceEE
Confidence 554333333 4699996666666778888888877653
No 130
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.18 E-value=0.014 Score=67.11 Aligned_cols=63 Identities=17% Similarity=0.358 Sum_probs=50.9
Q ss_pred ccCCCCeEEEEEccc---ccee--------------eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHH
Q 007464 384 EVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQL 446 (603)
Q Consensus 384 eve~G~~yELVvTt~---~GL~--------------RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~ 446 (603)
.++.|..+|+.++.. .|++ .|+|||++|-. ....++|+||.+..+++.|..+-..+|+.
T Consensus 561 ~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~----~dg~~e~lgr~D~qvki~g~Riel~eie~ 636 (642)
T COG1020 561 PLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPL----ADGALEYLGRKDSQVKIRGFRIELGEIEA 636 (642)
T ss_pred cCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeEC----CCCeEEEeccccceeEeceEecCcHHHHH
Confidence 456788899999773 4432 39999999944 36799999999999999999998889988
Q ss_pred HHHH
Q 007464 447 SVDE 450 (603)
Q Consensus 447 av~~ 450 (603)
++..
T Consensus 637 ~l~~ 640 (642)
T COG1020 637 ALAE 640 (642)
T ss_pred HHhc
Confidence 7753
No 131
>PTZ00297 pantothenate kinase; Provisional
Probab=96.27 E-value=0.066 Score=67.17 Aligned_cols=56 Identities=9% Similarity=0.077 Sum_probs=38.6
Q ss_pred eEEEEEccccceeeceeCCEEEEeceeCCCCEEEEEeecCceEee-eeeecCHHHHHHHHHH
Q 007464 390 EYEIIVTNVAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTI-NIDKNTEKDLQLSVDE 450 (603)
Q Consensus 390 ~yELVvTt~~GL~RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v-~Gekv~e~~v~~av~~ 450 (603)
.|||++... +- .-.|+++ ++|+. ....++++||.|++++. .||+|.++.||+.+..
T Consensus 825 ~GEIlvr~~-kd-pe~T~e~--~~gW~-~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~ 881 (1452)
T PTZ00297 825 IGQLVLAKK-GE-PRRTLPI--AAQWK-RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQ 881 (1452)
T ss_pred CCeEEEEEC-CC-hHHHHHh--hCcCc-cCCeEEEEeccccceECCCCcEEcHHHHHHHHhc
Confidence 478888311 00 0225553 23442 45799999999999765 6899999999998864
No 132
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=95.05 E-value=0.073 Score=46.15 Aligned_cols=81 Identities=12% Similarity=0.100 Sum_probs=50.8
Q ss_pred eeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCC--HHHHHHHHHHHHHhccChhhHHHh
Q 007464 436 IDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVN--DEVLKECCNCLDRSFVDAGYVSAR 513 (603)
Q Consensus 436 Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~hy~l~vE~~~~~~--~~~l~~~~~~ld~~L~n~~Y~~~R 513 (603)
|.|++|.+|+++|.+. + ++ -.+|.+........-+..+.+|...+.. ...++.+++.+.++|
T Consensus 1 GvnvfP~~Ie~vl~~~-~-----~~-~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~l--------- 64 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREF-P-----EV-SPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERL--------- 64 (96)
T ss_dssp TEEE-HHHHHHHHCTS-T-----TE-EEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHH---------
T ss_pred CcEECHHHHHHHHHhC-c-----CC-CCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHH---------
Confidence 7899999999999865 2 22 1278877653333346668889866432 346667777777776
Q ss_pred hcC-CcCCeEEEEeccChHHH
Q 007464 514 KVN-AIGPLELRVVLKGTFQQ 533 (603)
Q Consensus 514 ~~g-~l~p~~v~~v~~GtF~~ 533 (603)
+.. .+. ++|++|++|++.+
T Consensus 65 k~~lgv~-~~V~lv~~gtLpr 84 (96)
T PF14535_consen 65 KERLGVR-PEVELVPPGTLPR 84 (96)
T ss_dssp HHHHSS--EEEEEE-TT-S--
T ss_pred HhhcCce-EEEEEECCCCccC
Confidence 222 344 5999999999986
No 133
>PRK09188 serine/threonine protein kinase; Provisional
Probab=94.87 E-value=0.11 Score=56.09 Aligned_cols=40 Identities=10% Similarity=0.046 Sum_probs=34.1
Q ss_pred eceeCCEEEEeceeCCCCEEEEEeecCceEeeee---eecCHHHHHHHHHHH
Q 007464 403 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINI---DKNTEKDLQLSVDEA 451 (603)
Q Consensus 403 RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~G---ekv~e~~v~~av~~a 451 (603)
||+|||++++.+ ..+.+.|+||.+ +| +||++. ||++|.+.
T Consensus 210 W~~TGDlg~~~d---~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~h 252 (365)
T PRK09188 210 WLATGKKVYNFI---TRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSD 252 (365)
T ss_pred EEeCCCEEEEEc---CCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhC
Confidence 899999999842 268899999998 78 899999 99888763
No 134
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=69.09 E-value=9.4 Score=46.55 Aligned_cols=45 Identities=18% Similarity=0.131 Sum_probs=40.7
Q ss_pred eceeCCEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHH
Q 007464 403 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 451 (603)
Q Consensus 403 RYr~GDvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a 451 (603)
+|||||.+|..- ..-++|.||.++.++++|.++.=.++..++..-
T Consensus 455 ~y~tgD~gr~l~----ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~ 499 (1032)
T KOG1178|consen 455 IYRTGDNGRSLK----NGGLEISGRADRQIKDRGVRIELGELNTVVEVH 499 (1032)
T ss_pred cccccccceeec----CCCEEEEEeccceEEEccEEEehhhhchhhccC
Confidence 499999999874 678999999999999999999999999988765
No 135
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=64.46 E-value=5.9 Score=43.74 Aligned_cols=28 Identities=14% Similarity=0.195 Sum_probs=21.6
Q ss_pred CCcceeeccccCCCCCcccccCChHHHHH
Q 007464 90 KPITTISRSSGTTQGKPKFLPFNDELMET 118 (603)
Q Consensus 90 ~pi~~f~~TSGTT~G~~K~IP~t~~~l~~ 118 (603)
+.......||||| |.||-+..|.+.+..
T Consensus 120 ~~~~~i~~TSGTT-G~PKgV~~t~~~l~~ 147 (452)
T PRK07445 120 ETGWIMIPTGGSS-GQIRFAIHTWETLTA 147 (452)
T ss_pred CCcEEEEeCCCCC-CCCcEEEechHHHHH
Confidence 3444566799999 899999999876543
No 136
>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe. In PAH, an autoregulatory sequence, N-terminal of the ACT domain, extends across the catalytic domain active site and regulates the enzyme by intrasteric regulation. It appears that the activation by L-Phe induces a conformational change that converts the enzyme to a high-affinity and high-activity state. Modulation of activity is achieved through inhibition by BH4 and activation by phosphorylation of serine residues of the autoregulatory region. The molecular basis for the cooperative activation process is not fully understood yet. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=55.43 E-value=68 Score=27.51 Aligned_cols=58 Identities=10% Similarity=0.147 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHHhc
Q 007464 441 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSF 504 (603)
Q Consensus 441 e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~hy~l~vE~~~~~~~~~l~~~~~~ld~~L 504 (603)
+..+..++..+.. .|+.+..-...+- ...++.|.+|||+.+. ..+.+++..+.|.+.+
T Consensus 25 pGsL~~vL~~Fa~----~~INLt~IeSRP~-~~~~~~Y~FfVDieg~-~~~~~~~~l~~L~~~~ 82 (90)
T cd04931 25 VGALAKVLRLFEE----KDINLTHIESRPS-RLNKDEYEFFINLDKK-SAPALDPIIKSLRNDI 82 (90)
T ss_pred CcHHHHHHHHHHH----CCCCEEEEEeccC-CCCCceEEEEEEEEcC-CCHHHHHHHHHHHHHh
Confidence 4456666665543 6887877666653 3356789999999765 3345555556666554
No 137
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=49.31 E-value=16 Score=41.80 Aligned_cols=27 Identities=15% Similarity=0.272 Sum_probs=22.3
Q ss_pred CCcceeeccccCCCCCcccccCChHHHH
Q 007464 90 KPITTISRSSGTTQGKPKFLPFNDELME 117 (603)
Q Consensus 90 ~pi~~f~~TSGTT~G~~K~IP~t~~~l~ 117 (603)
+.+.+...||||| |+||-+..|...+.
T Consensus 193 ~d~a~i~yTSGTT-G~PKgV~~sh~~l~ 219 (612)
T PRK12476 193 DDVSHLQYTSGST-RPPVGVEITHRAVG 219 (612)
T ss_pred CceEEEEeCCCCC-CCCceEEeeHHHHH
Confidence 3455788899999 99999999987664
No 138
>PF01797 Y1_Tnp: Transposase IS200 like; InterPro: IPR002686 Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This entry represents a domain found in transposases for IS200 from Escherichia coli []. More information about these proteins can be found at Protein of the Month: Transposase [].; GO: 0003677 DNA binding, 0004803 transposase activity, 0006313 transposition, DNA-mediated; PDB: 2F5G_B 2F4F_B 2EC2_F 2XM3_C 2XQC_D 2XO6_A 2XMA_E 2VJV_B 2VIH_B 2VJU_A ....
Probab=45.48 E-value=92 Score=27.30 Aligned_cols=101 Identities=11% Similarity=0.152 Sum_probs=54.9
Q ss_pred EEeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHHh
Q 007464 424 FICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRS 503 (603)
Q Consensus 424 f~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~hy~l~vE~~~~~~~~~l~~~~~~ld~~ 503 (603)
++-|.+.--.+..+. ..+.+.+.+...+. ..++.+.+|.+.+| |+.++++...+. .+.++...+...
T Consensus 8 iv~~~~~r~~~~~~~-~~~~l~~~l~~~~~---~~~~~i~~~~vm~n------HvHllv~~~~~~---~is~~~~~lK~~ 74 (121)
T PF01797_consen 8 IVFRTKYRRPLFNDE-IREALLEILREICE---EYGIEIIAFVVMPN------HVHLLVSIPPKQ---SISKFMQRLKGR 74 (121)
T ss_dssp EEEEBGGGTSSSSHH-HHHHHHHHHHHHHH---HTTEEEEEEEEETT------EEEEEEEE-TTS----HHHHHHHHHHH
T ss_pred EEEeeeCCEeeeehh-eeeeeeeccccccc---cccceeeeecccCc------ccceeeeecccc---cchheeeccccc
Confidence 334444333334444 55666677777666 57999999998755 999999985432 344444444442
Q ss_pred c---cChhhHHHhhc----CCc--CCeEEEEeccChHHHHHHH
Q 007464 504 F---VDAGYVSARKV----NAI--GPLELRVVLKGTFQQILDH 537 (603)
Q Consensus 504 L---~n~~Y~~~R~~----g~l--~p~~v~~v~~GtF~~~~~~ 537 (603)
. .|..|...... |.+ ..--...+....++...++
T Consensus 75 ~s~~~~k~~~~~~~~~~~~~~~Wq~~y~~~~i~~~~~~~~~~Y 117 (121)
T PF01797_consen 75 SSRWINKEFPELKKRYFWRGHFWQRGYFDRSIRNESLDNVIRY 117 (121)
T ss_dssp HHHHHHHHTHHHHHSCCT-TSSBESEEEEEEEBSSBHHHHHHH
T ss_pred ccccccccccceecccccccccccCCeEEEEECChhHHHHHHH
Confidence 1 24333333211 221 2344556666566665554
No 139
>cd04880 ACT_AAAH-PDT-like ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH). ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. Eukaryotic AAAHs have an N-terminal ACT (regulatory) domain, a middle catalytic domain and a C-terminal domain which is responsible for the oligomeric state of the enzyme forming a domain-swapped tetrameric coiled-coil. The PAH, TH, and TPH enzymes contain highly conserved catalytic domains but distinct N-terminal ACT domains and differ in their mech
Probab=42.47 E-value=1.6e+02 Score=23.53 Aligned_cols=55 Identities=22% Similarity=0.282 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHH
Q 007464 443 DLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 502 (603)
Q Consensus 443 ~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~hy~l~vE~~~~~~~~~l~~~~~~ld~ 502 (603)
.+.+++.-.. ..|+.+..-...+. ...++.|.+|+|+.+..+....+.+.+.|++
T Consensus 12 ~L~~vL~~f~----~~~vni~~I~Srp~-~~~~~~~~f~id~~~~~~~~~~~~~l~~l~~ 66 (75)
T cd04880 12 ALAKALKVFA----ERGINLTKIESRPS-RKGLWEYEFFVDFEGHIDDPDVKEALEELKR 66 (75)
T ss_pred HHHHHHHHHH----HCCCCEEEEEeeec-CCCCceEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 4545554443 47888877665543 3356889999999765344455555555544
No 140
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=37.87 E-value=2.1e+02 Score=35.48 Aligned_cols=128 Identities=19% Similarity=0.129 Sum_probs=78.5
Q ss_pred ccCCCCeEEEEEccccc---------------------------eeeceeCCEEEEeceeC------CCCEEEEEeecCc
Q 007464 384 EVKVGEEYEIIVTNVAG---------------------------LYRYRLGDVVKVMGFHN------STPELKFICRRNL 430 (603)
Q Consensus 384 eve~G~~yELVvTt~~G---------------------------L~RYr~GDvvrv~g~~~------~~P~i~f~gR~~~ 430 (603)
....|+.||+.+.+..+ .-+=||||++-+....+ ..+.+-++|=.+.
T Consensus 1174 pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~E 1253 (1363)
T KOG3628|consen 1174 PCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDE 1253 (1363)
T ss_pred ccccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEEEeecccc
Confidence 35679999999865432 22468888864433222 2467888999999
Q ss_pred eEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHHhccChhhH
Q 007464 431 LLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSFVDAGYV 510 (603)
Q Consensus 431 ~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~hy~l~vE~~~~~~~~~l~~~~~~ld~~L~n~~Y~ 510 (603)
.+-++|=.-++.+||+.|.++-... .|.- -|+. .+--|+.+|..+++...+|--+ .....| +.|
T Consensus 1254 tlEl~GL~h~p~DIE~TV~~vH~~I--~~ca--vF~~-------~glvVvviE~~gq~~~~~LvPl--Iv~~vL-~eH-- 1317 (1363)
T KOG3628|consen 1254 TLELNGLRHFPSDIETTVERVHPSI--GGCA--VFQA-------TGLVVVVIECHGQQELADLVPL--IVNVVL-EEH-- 1317 (1363)
T ss_pred eeeecCcccCcchHHHHHHHhcccc--ccee--eEee-------CCeEEEEEEecCchhHhhhhHH--HHHHHH-hhc--
Confidence 9999999999999999999885522 1211 1221 3567788998763222222111 111122 222
Q ss_pred HHhhcCCcCCeEEEEeccChHHH
Q 007464 511 SARKVNAIGPLELRVVLKGTFQQ 533 (603)
Q Consensus 511 ~~R~~g~l~p~~v~~v~~GtF~~ 533 (603)
+.|. =-|.+|++|.|.+
T Consensus 1318 -----~iI~-dvV~fV~~G~~p~ 1334 (1363)
T KOG3628|consen 1318 -----YIIL-DVVAFVDKGVFPR 1334 (1363)
T ss_pred -----ceEE-EEEEEecCCcccc
Confidence 2233 2478899999874
No 141
>PRK07798 acyl-CoA synthetase; Validated
Probab=36.99 E-value=17 Score=40.34 Aligned_cols=23 Identities=30% Similarity=0.345 Sum_probs=19.7
Q ss_pred eeeccccCCCCCcccccCChHHHH
Q 007464 94 TISRSSGTTQGKPKFLPFNDELME 117 (603)
Q Consensus 94 ~f~~TSGTT~G~~K~IP~t~~~l~ 117 (603)
+...||||| |.||-+..|...+.
T Consensus 167 ~i~~TSGTT-G~PK~v~~s~~~~~ 189 (533)
T PRK07798 167 YLLYTGGTT-GMPKGVMWRQEDIF 189 (533)
T ss_pred EEEECCCCC-CCCcEEEEecHHHH
Confidence 667799999 89999999987653
No 142
>PF11454 DUF3016: Protein of unknown function (DUF3016); InterPro: IPR021557 This is a bacterial family of uncharacterised proteins.
Probab=35.82 E-value=88 Score=29.28 Aligned_cols=58 Identities=19% Similarity=0.250 Sum_probs=39.0
Q ss_pred cCCCCeEEEEEcc--ccceeec----eeCCEEEEeceeCCCCEEEEEeec----CceEeeeeeecCHHHH
Q 007464 385 VKVGEEYEIIVTN--VAGLYRY----RLGDVVKVMGFHNSTPELKFICRR----NLLLTINIDKNTEKDL 444 (603)
Q Consensus 385 ve~G~~yELVvTt--~~GL~RY----r~GDvvrv~g~~~~~P~i~f~gR~----~~~i~v~Gekv~e~~v 444 (603)
|++|+.-+|.||. ++|-+++ .++|+=.|.+- -.|+|.|.+.. +.+|.-+-|++.....
T Consensus 47 Lp~gq~L~v~VtDvDLAG~~~P~~~~~~~dvRvvkdi--~pPRI~l~Y~L~d~~G~vi~~g~e~L~Dm~f 114 (141)
T PF11454_consen 47 LPPGQTLEVTVTDVDLAGDVEPFWGSGANDVRVVKDI--YPPRIELSYTLTDADGKVIKQGEEKLKDMGF 114 (141)
T ss_pred CCCCCEEEEEEEecccCcccccCcCCCCCcEEEEccC--CCCcEEEEEEEECCCCcEEEecceEEecchh
Confidence 7899999999999 5997765 44565444443 35788776653 4556665577665444
No 143
>COG5475 Uncharacterized small protein [Function unknown]
Probab=33.59 E-value=45 Score=26.04 Aligned_cols=25 Identities=20% Similarity=0.319 Sum_probs=20.8
Q ss_pred eceeCCEEEEeceeCCCCEEEEEeecCc
Q 007464 403 RYRLGDVVKVMGFHNSTPELKFICRRNL 430 (603)
Q Consensus 403 RYr~GDvvrv~g~~~~~P~i~f~gR~~~ 430 (603)
-|.|||+|++.. +.|++.+.+=..|
T Consensus 4 ~FstgdvV~lKs---GGP~Mtvs~~ss~ 28 (60)
T COG5475 4 SFSTGDVVTLKS---GGPRMTVSGYSSD 28 (60)
T ss_pred eeecCcEEEeec---CCceEEEeccccC
Confidence 378999999997 6899988887764
No 144
>cd04905 ACT_CM-PDT C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme. The C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme, found in plants, fungi, bacteria, and archaea. The P-protein of E. coli (CM-PDT, PheA) catalyzes the conversion of chorismate to prephenate and then the decarboxylation and dehydration to form phenylpyruvate. These are the first two steps in the biosynthesis of L-Phe and L-Tyr via the shikimate pathway in microorganisms and plants. The E. coli P-protein (CM-PDT) has three domains with an N-terminal domain with chorismate mutase activity, a middle domain with prephenate dehydratase activity, and an ACT regulatory C-terminal domain. The prephenate dehydratase enzyme has a PDT and ACT domain. The ACT domain is essential to bring about the negative allosteric regulation by L-Phe bindi
Probab=31.71 E-value=2.8e+02 Score=22.48 Aligned_cols=45 Identities=22% Similarity=0.330 Sum_probs=28.6
Q ss_pred hcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHH
Q 007464 457 EEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 502 (603)
Q Consensus 457 ~~g~~l~~f~~~~~~~~~~~hy~l~vE~~~~~~~~~l~~~~~~ld~ 502 (603)
+.|+.+..-.+.+. ......|.++++.....+.+.+....+.|++
T Consensus 24 ~~~ini~~i~s~p~-~~~~~~~~f~vd~~~~~~~~~~~~~l~~l~~ 68 (80)
T cd04905 24 ERGINLTKIESRPS-KGGLWEYVFFIDFEGHIEDPNVAEALEELKR 68 (80)
T ss_pred HCCcCEEEEEEEEc-CCCCceEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 46887766665554 2345779999998765444555555555554
No 145
>COG2139 RPL21A Ribosomal protein L21E [Translation, ribosomal structure and biogenesis]
Probab=31.59 E-value=34 Score=29.75 Aligned_cols=35 Identities=20% Similarity=0.442 Sum_probs=20.8
Q ss_pred eeceeCCEEEEe---ceeCCCCEEEEEeecCceEeeee
Q 007464 402 YRYRLGDVVKVM---GFHNSTPELKFICRRNLLLTINI 436 (603)
Q Consensus 402 ~RYr~GDvvrv~---g~~~~~P~i~f~gR~~~~i~v~G 436 (603)
.-|..||.|-++ +++...|-=+|.||++.++...|
T Consensus 31 ~ey~~Gd~V~I~IdpSv~kGmPh~rf~G~TG~Vvg~~g 68 (98)
T COG2139 31 QEYKVGDKVHIDIDPSVHKGMPHPRFQGKTGTVVGVRG 68 (98)
T ss_pred hhccCCCEEEEEeCcccccCCCCccccCcceEEEeccC
Confidence 346677766655 34445566666677666665554
No 146
>PRK11899 prephenate dehydratase; Provisional
Probab=31.40 E-value=3.7e+02 Score=28.06 Aligned_cols=57 Identities=11% Similarity=0.046 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHH
Q 007464 441 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 502 (603)
Q Consensus 441 e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~hy~l~vE~~~~~~~~~l~~~~~~ld~ 502 (603)
+..+.++|..+.. .|+.+.-..+.+. ...++.|.+|+|+.+..+.+.+++..+.|.+
T Consensus 205 pGaL~~vL~~Fa~----~gINLtkIeSRP~-~~~~~~Y~F~id~eg~~~d~~v~~aL~~l~~ 261 (279)
T PRK11899 205 PAALYKALGGFAT----NGVNMTKLESYMV-GGSFTATQFYADIEGHPEDRNVALALEELRF 261 (279)
T ss_pred CChHHHHHHHHHH----cCCCeeeEEeeec-CCCCceEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 4566677766654 6777776666653 3467899999999876443344444444443
No 147
>CHL00123 rps6 ribosomal protein S6; Validated
Probab=30.85 E-value=2.3e+02 Score=24.56 Aligned_cols=53 Identities=15% Similarity=0.172 Sum_probs=34.8
Q ss_pred eeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEE-------eecCCCCCceEEEEEEeccC
Q 007464 434 INIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTS-------HVDLSTDPGHYVIFWEVSGE 487 (603)
Q Consensus 434 v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~-------~~~~~~~~~hy~l~vE~~~~ 487 (603)
+---.+++++++.++.+....+.+.|.++....- ++-.....|||+ ++.+..+
T Consensus 13 Il~p~l~e~~~~~~~~~~~~~i~~~gg~i~~~~~wG~r~LAY~I~k~~~G~Yv-~~~f~~~ 72 (97)
T CHL00123 13 LLKPDLNEEELLKWIENYKKLLRKRGAKNISVQNRGKRKLSYKINKYEDGIYI-QMNYSGN 72 (97)
T ss_pred EECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEeecCeeeeEEcCCCCEEEEE-EEEEEEC
Confidence 3345678999999999987777777887765542 222234568996 4456433
No 148
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=30.53 E-value=28 Score=39.61 Aligned_cols=31 Identities=26% Similarity=0.488 Sum_probs=22.3
Q ss_pred CCCCe----EEEEEccccce--eeceeCCEEEEecee
Q 007464 386 KVGEE----YEIIVTNVAGL--YRYRLGDVVKVMGFH 416 (603)
Q Consensus 386 e~G~~----yELVvTt~~GL--~RYr~GDvvrv~g~~ 416 (603)
+.|.. |-|++-.--|+ ++=||||+.|=.|..
T Consensus 484 kkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGEN 520 (649)
T KOG1179|consen 484 KKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGEN 520 (649)
T ss_pred ccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCc
Confidence 66764 45666666784 467999999988753
No 149
>PF12401 DUF3662: Protein of unknown function (DUF2662) ; InterPro: IPR022128 This domain family is found in bacteria, and is approximately 120 amino acids in length. The family is found in association with PF00498 from PFAM. ; PDB: 2LC0_A.
Probab=30.30 E-value=62 Score=29.10 Aligned_cols=86 Identities=15% Similarity=0.149 Sum_probs=38.9
Q ss_pred eeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHHhccChhhHHHh
Q 007464 434 INIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSFVDAGYVSAR 513 (603)
Q Consensus 434 v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~hy~l~vE~~~~~~~~~l~~~~~~ld~~L~n~~Y~~~R 513 (603)
+++-.+-+.||..+|.+.+.. ++.. +..+..--|-+|++.+-. . |-+.+..+...|.+.|...-.+..+
T Consensus 19 ~F~~~vqPvEIa~~L~remd~----~a~~----~~~~r~~aPN~y~V~Ls~--~-D~~~l~~~~~~l~~el~~~l~~~a~ 87 (116)
T PF12401_consen 19 VFRSEVQPVEIAKALRREMDD----QARV----VSRGRTLAPNVYTVELSP--E-DYERLSPWGDRLARELADYLAEHAR 87 (116)
T ss_dssp HHTTSS-THHHHHHHHHHHHH----T-B-------TT--B---EEEEEEEH--H-HHHHH-S-SHHHHHHHHHHHHHHHH
T ss_pred hcCCCCcHHHHHHHHHHHHHh----CCee----cCCCCEEcCeeEEEEECH--H-HHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 345568899999999998762 2111 111111135688855521 1 1111221222333333222334445
Q ss_pred hcC--CcCCeEEEEeccCh
Q 007464 514 KVN--AIGPLELRVVLKGT 530 (603)
Q Consensus 514 ~~g--~l~p~~v~~v~~Gt 530 (603)
..| ..||+.|++.....
T Consensus 88 ~qgy~~~G~v~V~~~~d~~ 106 (116)
T PF12401_consen 88 EQGYTFVGPVTVEFEEDPD 106 (116)
T ss_dssp HHT-B-SS--EEEEEEETT
T ss_pred HCCCeecCCEEEEEEECCC
Confidence 555 58999999987654
No 150
>PRK04306 50S ribosomal protein L21e; Reviewed
Probab=30.01 E-value=39 Score=29.61 Aligned_cols=35 Identities=17% Similarity=0.265 Sum_probs=25.8
Q ss_pred eceeCCEEEEece---eCCCCEEEEEeecCceEeeeee
Q 007464 403 RYRLGDVVKVMGF---HNSTPELKFICRRNLLLTINID 437 (603)
Q Consensus 403 RYr~GDvvrv~g~---~~~~P~i~f~gR~~~~i~v~Ge 437 (603)
-|+.||.|-+..- +.+.|-=.|.||++-++++.|.
T Consensus 34 ~y~~Gd~V~I~~d~sv~kGmPh~~yhGkTG~V~~v~~~ 71 (98)
T PRK04306 34 EFEEGDKVHIVIDPSVHKGMPHPRFHGKTGTVVGKRGR 71 (98)
T ss_pred hccCCCEEEEEecCceecCCccccccCCCEEEEeecCe
Confidence 4889999887742 2356777888888888887763
No 151
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=29.94 E-value=45 Score=25.80 Aligned_cols=19 Identities=26% Similarity=0.714 Sum_probs=15.0
Q ss_pred ceeCCEEEEeceeCCCCEEEEE
Q 007464 404 YRLGDVVKVMGFHNSTPELKFI 425 (603)
Q Consensus 404 Yr~GDvvrv~g~~~~~P~i~f~ 425 (603)
|.+||+|+..+ +.|.+.+.
T Consensus 1 f~~GDvV~LKS---GGp~MTV~ 19 (53)
T PF09926_consen 1 FKIGDVVQLKS---GGPRMTVT 19 (53)
T ss_pred CCCCCEEEEcc---CCCCeEEE
Confidence 68999999987 57866555
No 152
>PRK11898 prephenate dehydratase; Provisional
Probab=29.57 E-value=3.6e+02 Score=28.09 Aligned_cols=57 Identities=23% Similarity=0.323 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHH
Q 007464 441 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 502 (603)
Q Consensus 441 e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~hy~l~vE~~~~~~~~~l~~~~~~ld~ 502 (603)
+..+.++|.-+.. .|+.+..--+.+ ....++.|.+|+|+.+..+.+.+++..+.|.+
T Consensus 208 pGsL~~~L~~F~~----~~INLt~IeSRP-~~~~~~~y~F~vd~eg~~~~~~~~~al~~L~~ 264 (283)
T PRK11898 208 PGALYKALSEFAW----RGINLTRIESRP-TKTGLGTYFFFIDVEGHIDDVLVAEALKELEA 264 (283)
T ss_pred ccHHHHHHHHHHH----CCCCeeeEeccc-CCCCCccEEEEEEEEccCCCHHHHHHHHHHHH
Confidence 4567777766543 688777666654 33456889999999766554445555444544
No 153
>cd03483 MutL_Trans_MLH1 MutL_Trans_MLH1: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to yeast and human MLH1 (MutL homologue 1). This transducer domain is homologous to the second domain of the DNA gyrase B subunit, which is known to be important in nucleotide hydrolysis and the transduction of structural signals from ATP-binding site to the DNA breakage/reunion regions of the enzymes. MLH1 forms heterodimers with PMS2, PMS1 and MLH3. These three complexes have distinct functions in meiosis. hMLH1-hPMS2 also participates in the repair of all DNA mismatch repair (MMR) substrates. Roles for hMLH1-hPMS1 or hMLH1-hMLH3 in MMR have not been established. Cells lacking hMLH1 have a strong mutator phenotype and display microsatellite instability (MSI). Mutation in hMLH1 causes predisposition to HNPCC, Muir-Torre syndrome and Turcot syndrome (HNPCC variant). Mutation in hMLH1 accounts for a large fraction of HNPCC families.
Probab=29.15 E-value=2.4e+02 Score=25.50 Aligned_cols=44 Identities=18% Similarity=0.104 Sum_probs=35.7
Q ss_pred CEEEEeceeCCCCEEEEEeecCceEeeeeeecCHHHHHHHHHHHHH
Q 007464 408 DVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQ 453 (603)
Q Consensus 408 Dvvrv~g~~~~~P~i~f~gR~~~~i~v~Gekv~e~~v~~av~~a~~ 453 (603)
+-+++.|+- +.|.+. .+|..+++-++|.-+....+..||.++-.
T Consensus 30 ~~~~i~G~i-s~p~~~-~~~~~q~~fVNgR~V~~~~l~~aI~~~Y~ 73 (127)
T cd03483 30 LGFKVKGLI-SNANYS-KKKIIFILFINNRLVECSALRRAIENVYA 73 (127)
T ss_pred CcEEEEEEE-cCchhc-CCCceEEEEEcCCEecCHHHHHHHHHHHH
Confidence 457888875 356666 67777889999999999999999999866
No 154
>PTZ00189 60S ribosomal protein L21; Provisional
Probab=28.33 E-value=46 Score=31.71 Aligned_cols=34 Identities=18% Similarity=0.405 Sum_probs=26.0
Q ss_pred eceeCCEEEEec---eeCCCCEEEEEeecCceEeeee
Q 007464 403 RYRLGDVVKVMG---FHNSTPELKFICRRNLLLTINI 436 (603)
Q Consensus 403 RYr~GDvvrv~g---~~~~~P~i~f~gR~~~~i~v~G 436 (603)
-|+.||+|-+.+ .+.+.|.=.|.||++-+.++.|
T Consensus 33 ~yk~GD~VdIk~d~svqkGMPhk~YHGkTG~V~nv~~ 69 (160)
T PTZ00189 33 TFKVGDYVDIVVDSAVHKGMPYKYYHGRTGRVFNVTP 69 (160)
T ss_pred HccCCCEEEEEecCCeecCCCcccccCCCeEEEeecC
Confidence 488899988775 3346787788888888887776
No 155
>cd04904 ACT_AAAH ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH). ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe; TH catalyses the hydroxylation of L-Tyr to 3,4-dihydroxyphenylalanine, the rate limiting step in the biosynthesis of catecholamines; and TPH catalyses the hydroxylation of L-Trp to 5-hydroxytryptophan, the rate limiting step in the biosynthesis of 5-hydroxy
Probab=28.13 E-value=3e+02 Score=22.21 Aligned_cols=54 Identities=13% Similarity=0.102 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHH
Q 007464 441 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLD 501 (603)
Q Consensus 441 e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~hy~l~vE~~~~~~~~~l~~~~~~ld 501 (603)
+..+.+++.... ..|+.+..--+.+ ....++.|.+|||+.+. + +.+++..+.|.
T Consensus 11 pG~L~~vL~~f~----~~~iNlt~IeSRP-~~~~~~~y~Ffvd~~~~-~-~~~~~~l~~L~ 64 (74)
T cd04904 11 VGALARALKLFE----EFGVNLTHIESRP-SRRNGSEYEFFVDCEVD-R-GDLDQLISSLR 64 (74)
T ss_pred CcHHHHHHHHHH----HCCCcEEEEECCC-CCCCCceEEEEEEEEcC-h-HHHHHHHHHHH
Confidence 344656665543 4687777665554 33456889999999762 2 23444444443
No 156
>COG0077 PheA Prephenate dehydratase [Amino acid transport and metabolism]
Probab=27.94 E-value=4e+02 Score=27.89 Aligned_cols=56 Identities=23% Similarity=0.386 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHH
Q 007464 441 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLD 501 (603)
Q Consensus 441 e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~hy~l~vE~~~~~~~~~l~~~~~~ld 501 (603)
+..+..+|..+. +.|+.+.-.-+.+ ....++.|.+|||+.+..+...+++..++|.
T Consensus 205 PGaL~~~L~~Fa----~~gINlTkIESRP-~k~~~~~Y~F~iD~eg~~~~~~v~~AL~el~ 260 (279)
T COG0077 205 PGALYKALGVFA----KRGINLTKIESRP-LKTGLGEYLFFIDIEGHIDDPLVKEALEELK 260 (279)
T ss_pred CchHHHHHHHHH----HcCcceeeEeecc-cCCCCeeEEEEEEEecCcCcHhHHHHHHHHH
Confidence 445555555543 4677665444443 3456899999999987655444444433443
No 157
>PRK09444 pntB pyridine nucleotide transhydrogenase; Provisional
Probab=26.21 E-value=1.8e+02 Score=32.53 Aligned_cols=78 Identities=17% Similarity=0.210 Sum_probs=58.0
Q ss_pred EeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEE-EeccCCCHHHHHHHHHHHHHh
Q 007464 425 ICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFW-EVSGEVNDEVLKECCNCLDRS 503 (603)
Q Consensus 425 ~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~hy~l~v-E~~~~~~~~~l~~~~~~ld~~ 503 (603)
..-.+.++.+-|--.-..+-+.+|.+..+.|++.|+++ .|.++|-....|||--+++ |. +.+-+. ..++|+
T Consensus 303 l~~A~~ViIVPGYGmAVAqAQh~v~el~~~L~~~Gv~V-~faIHPVAGRMPGHMNVLLAEA--~VPYd~----v~eMde- 374 (462)
T PRK09444 303 LKNSHSVIITPGYGMAVAQAQYPVAEITEKLRARGINV-RFGIHPVAGRLPGHMNVLLAEA--KVPYDI----VLEMDE- 374 (462)
T ss_pred HHhCCcEEEECChHHHHHHHHHHHHHHHHHHHHCCCeE-EEEeccccccCCCcceeEEeec--CCCHHH----HHhHHh-
Confidence 34457788889999999999999999999998899988 6999988888999998555 43 222222 234665
Q ss_pred ccChhhHH
Q 007464 504 FVDAGYVS 511 (603)
Q Consensus 504 L~n~~Y~~ 511 (603)
.|+++..
T Consensus 375 -IN~~F~~ 381 (462)
T PRK09444 375 -INDDFAD 381 (462)
T ss_pred -hcccccc
Confidence 3776654
No 158
>PLN00190 60S ribosomal protein L21; Provisional
Probab=23.63 E-value=60 Score=30.88 Aligned_cols=34 Identities=18% Similarity=0.430 Sum_probs=26.0
Q ss_pred eceeCCEEEEec---eeCCCCEEEEEeecCceEeeee
Q 007464 403 RYRLGDVVKVMG---FHNSTPELKFICRRNLLLTINI 436 (603)
Q Consensus 403 RYr~GDvvrv~g---~~~~~P~i~f~gR~~~~i~v~G 436 (603)
-|+.||+|-+.+ .+.+.|-=.|.||++-+.++.|
T Consensus 33 ~yk~GD~VdIk~~~svqKGMPhk~YHGkTG~V~nv~~ 69 (158)
T PLN00190 33 TFKVGDYVDIKVNGAIHKGMPHKFYHGRTGIVWNVTK 69 (158)
T ss_pred HhcCCCEEEEEecCCeecCCCcccccCCCeEEEeecC
Confidence 488999988775 3346777788888888887775
No 159
>PRK13390 acyl-CoA synthetase; Provisional
Probab=23.05 E-value=40 Score=37.22 Aligned_cols=19 Identities=42% Similarity=0.441 Sum_probs=15.6
Q ss_pred ceeeccccCCCCCcccccCC
Q 007464 93 TTISRSSGTTQGKPKFLPFN 112 (603)
Q Consensus 93 ~~f~~TSGTT~G~~K~IP~t 112 (603)
.+...||||| |.||-+..+
T Consensus 151 a~i~~TSGTT-G~PKgV~~~ 169 (501)
T PRK13390 151 AVMLYSSGTT-GFPKGIQPD 169 (501)
T ss_pred EEEEeCCCCC-CCCCEEEee
Confidence 4667799999 999998743
No 160
>COG1282 PntB NAD/NADP transhydrogenase beta subunit [Energy production and conversion]
Probab=21.67 E-value=1.2e+02 Score=32.72 Aligned_cols=57 Identities=18% Similarity=0.167 Sum_probs=48.6
Q ss_pred EeecCceEeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEE
Q 007464 425 ICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFW 482 (603)
Q Consensus 425 ~gR~~~~i~v~Gekv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~hy~l~v 482 (603)
..-.+.+|.+-|--....|-+.+|++..+.|++.|+++. |.+++-....|||--+++
T Consensus 305 l~nA~sVIIvPGYGmAVAQAQh~v~E~~~~L~~~Gv~Vr-faIHPVAGRmPGHMNVLL 361 (463)
T COG1282 305 LKNASSVIIVPGYGMAVAQAQHPVAEITEKLRARGVNVR-FAIHPVAGRMPGHMNVLL 361 (463)
T ss_pred HhCCCeEEEecCchHHHHhhhhHHHHHHHHHHhcCCeee-EeecccccCCCcchhhhh
Confidence 345677888999999999999999999999989999885 999987778899987554
No 161
>PRK10622 pheA bifunctional chorismate mutase/prephenate dehydratase; Provisional
Probab=20.41 E-value=6.5e+02 Score=27.53 Aligned_cols=58 Identities=9% Similarity=0.136 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHH
Q 007464 440 TEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 502 (603)
Q Consensus 440 ~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~~~hy~l~vE~~~~~~~~~l~~~~~~ld~ 502 (603)
.+..+..+|..+.. .|+.+.---+.| ....++.|.+|+|+.+....+.+++..+.|.+
T Consensus 307 ~pGaL~~~L~~Fa~----~giNLtkIeSRP-~~~~~~~Y~Ffid~eg~~~d~~~~~aL~~l~~ 364 (386)
T PRK10622 307 QAGALVEALLVLRN----HNLIMTKLESRP-IHGNPWEEMFYLDVQANLRSAEMQKALKELGE 364 (386)
T ss_pred CCcHHHHHHHHHHH----cCCCeeEEEeee-cCCCCceEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 34566666666644 677666555554 34567899999999876443444444444444
No 162
>PF07311 Dodecin: Dodecin; InterPro: IPR009923 This entry represents proteins with a Dodecin-like topology. Dodecin flavoprotein is a small dodecameric flavin-binding protein from Halobacterium salinarium (Halobacterium halobium) that contains two flavins stacked in a single binding pocket between two tryptophan residues to form an aromatic tetrade []. Dodecin binds riboflavin, although it appears to have a broad specificity for flavins. Lumichrome, a molecule associated with flavin metabolism, appears to be a ligand of dodecin, which could act as a waste-trapping device. ; PDB: 2VYX_L 2DEG_F 2V18_K 2V19_D 2UX9_B 2CZ8_E 2V21_F 2CC8_A 2CCB_A 2VX9_A ....
Probab=20.06 E-value=2.6e+02 Score=22.73 Aligned_cols=47 Identities=26% Similarity=0.230 Sum_probs=33.3
Q ss_pred eecCHHHHHHHHHHHHHHhhh-cCCeeEeeEEeecCCCCCceEEEEEEe
Q 007464 437 DKNTEKDLQLSVDEAAQLLAE-EKQEVVDFTSHVDLSTDPGHYVIFWEV 484 (603)
Q Consensus 437 ekv~e~~v~~av~~a~~~l~~-~g~~l~~f~~~~~~~~~~~hy~l~vE~ 484 (603)
.+=.|+.+++||.+|.+.|+. .++++.+..+..+. +.-.||.+-+..
T Consensus 13 ~~S~edAv~~Av~~A~kTl~ni~~~eV~e~~~~v~d-g~i~~y~v~lkv 60 (66)
T PF07311_consen 13 PKSWEDAVQNAVARASKTLRNIRWFEVKEQRGHVED-GKITEYQVNLKV 60 (66)
T ss_dssp SSHHHHHHHHHHHHHHHHSSSEEEEEEEEEEEEEET-TCEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHhhchhCcEEEEEEEEEEEEeC-CcEEEEEEEEEE
Confidence 344588899999999887643 46777788876654 345788866654
Done!