Query 007469
Match_columns 602
No_of_seqs 163 out of 447
Neff 3.3
Searched_HMMs 13730
Date Tue Mar 26 02:37:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007469.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007469hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ml9a_ b.85.7.1 (A:) Dim-5 {F 66.0 1.7 0.00012 40.6 3.3 22 198-219 39-61 (284)
2 d1m0ja_ g.46.1.1 (A:) Metallot 61.1 1.2 9.1E-05 29.2 0.9 19 128-146 3-23 (28)
3 d2mrba_ g.46.1.1 (A:) Metallot 49.2 3.7 0.00027 27.5 1.7 21 127-147 4-27 (31)
4 d2bbga_ g.6.1.1 (A:) Amb V all 31.9 0.87 6.4E-05 32.0 -3.8 17 210-226 23-39 (40)
5 d1t2ya_ g.46.1.1 (A:) Metallot 28.8 14 0.001 23.7 1.9 12 136-147 12-24 (26)
6 d1ml9a_ b.85.7.1 (A:) Dim-5 {F 27.5 19 0.0014 33.1 3.5 19 113-131 39-58 (284)
7 d1te7a_ b.122.1.7 (A:) Hypothe 26.3 12 0.00089 31.2 1.7 26 478-503 63-88 (103)
8 d1mvha_ b.85.7.1 (A:) SET doma 22.7 20 0.0015 33.1 2.7 14 221-234 114-128 (269)
9 d1mvha_ b.85.7.1 (A:) SET doma 15.8 38 0.0028 31.1 2.9 13 137-149 115-129 (269)
10 d1m0ga_ g.46.1.1 (A:) Metallot 10.4 50 0.0037 21.6 1.3 26 115-140 2-28 (30)
No 1
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]}
Probab=66.04 E-value=1.7 Score=40.64 Aligned_cols=22 Identities=27% Similarity=0.957 Sum_probs=16.9
Q ss_pred cccccccCc-CcccchhhhhhcC
Q 007469 198 NKGCHCKKS-GCLKKYCECFQAN 219 (602)
Q Consensus 198 ~KGCnCKKS-~CLKkYCECFqAg 219 (602)
.-||.|.-. .|....|.|.+..
T Consensus 39 ~~gC~C~~~~~c~~~~C~C~~~~ 61 (284)
T d1ml9a_ 39 RVGCSCASDEECMYSTCQCLDEM 61 (284)
T ss_dssp CCCCCCSSTTGGGSTTSGGGTTS
T ss_pred CCCCCCcCCCCcCCCCCcChhhc
Confidence 469999866 5788899997654
No 2
>d1m0ja_ g.46.1.1 (A:) Metallothionein {Black rockcod (Notothenia coriiceps) [TaxId: 8208]}
Probab=61.14 E-value=1.2 Score=29.23 Aligned_cols=19 Identities=53% Similarity=1.431 Sum_probs=9.7
Q ss_pred hhhhcCCCC-CC-CCCCCCCC
Q 007469 128 CECFASGIY-CD-GCNCVNCH 146 (602)
Q Consensus 128 CECFAaG~y-C~-~CnC~nC~ 146 (602)
|||-.+|.- |. .|.|.||.
T Consensus 3 cecsksgtcncggsctctncs 23 (28)
T d1m0ja_ 3 CECSKSGTCNCGGSCTCTNCS 23 (28)
T ss_dssp CHHHHHSSCCCSSSCCSSSCC
T ss_pred cccccCcccccCCceeecCcc
Confidence 555555443 43 46665554
No 3
>d2mrba_ g.46.1.1 (A:) Metallothionein {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=49.24 E-value=3.7 Score=27.49 Aligned_cols=21 Identities=38% Similarity=1.072 Sum_probs=15.7
Q ss_pred hhhhhcCCCCCC---CCCCCCCCC
Q 007469 127 YCECFASGIYCD---GCNCVNCHN 147 (602)
Q Consensus 127 YCECFAaG~yC~---~CnC~nC~N 147 (602)
-|.|-++|..|. .|.|..|+-
T Consensus 4 ncscaaagdsc~ca~sctck~ckc 27 (31)
T d2mrba_ 4 NCSCAAAGDSCTCANSCTCKACKC 27 (31)
T ss_dssp SCCCCCSSSCCCCSSCCCCSSCCC
T ss_pred CccccccCCcccccCceeecceee
Confidence 477888888875 577777764
No 4
>d2bbga_ g.6.1.1 (A:) Amb V allergen {Giant ragweed (Ambrosia trifida), pollen [TaxId: 4214]}
Probab=31.95 E-value=0.87 Score=32.04 Aligned_cols=17 Identities=41% Similarity=1.366 Sum_probs=14.8
Q ss_pred cchhhhhhcCCccCCCC
Q 007469 210 KKYCECFQANILCSENC 226 (602)
Q Consensus 210 KkYCECFqAgi~CS~~C 226 (602)
-|||.||.....|..+|
T Consensus 23 gkycvcydskaicnknc 39 (40)
T d2bbga_ 23 GKYCVCYDSKAICNKNC 39 (40)
T ss_dssp SSSCEEESSHHHHHHHH
T ss_pred cCEEEEeccHHhhccCC
Confidence 58999999998888877
No 5
>d1t2ya_ g.46.1.1 (A:) Metallothionein {Neurospora crassa [TaxId: 5141]}
Probab=28.79 E-value=14 Score=23.75 Aligned_cols=12 Identities=50% Similarity=1.511 Sum_probs=9.2
Q ss_pred CCC-CCCCCCCCC
Q 007469 136 YCD-GCNCVNCHN 147 (602)
Q Consensus 136 yC~-~CnC~nC~N 147 (602)
-|. +|.|.||..
T Consensus 12 ncgsgcscsncgs 24 (26)
T d1t2ya_ 12 NCGSGCSCSNCGS 24 (26)
T ss_dssp CCSSSCCSSTTSC
T ss_pred cCCCCcccccccc
Confidence 365 899999964
No 6
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]}
Probab=27.48 E-value=19 Score=33.12 Aligned_cols=19 Identities=26% Similarity=1.015 Sum_probs=12.8
Q ss_pred CCcccccCc-ccccchhhhh
Q 007469 113 QKQCNCKHS-RCLKLYCECF 131 (602)
Q Consensus 113 ~K~CnCKKS-kCLKLYCECF 131 (602)
..+|.|.-. .|....|.|.
T Consensus 39 ~~gC~C~~~~~c~~~~C~C~ 58 (284)
T d1ml9a_ 39 RVGCSCASDEECMYSTCQCL 58 (284)
T ss_dssp CCCCCCSSTTGGGSTTSGGG
T ss_pred CCCCCCcCCCCcCCCCCcCh
Confidence 447888654 5677778884
No 7
>d1te7a_ b.122.1.7 (A:) Hypothetical protein YqfB {Escherichia coli [TaxId: 562]}
Probab=26.34 E-value=12 Score=31.23 Aligned_cols=26 Identities=31% Similarity=0.429 Sum_probs=22.7
Q ss_pred CCchhhHHHHHHHHHHHhhHHHHHHH
Q 007469 478 GQGMTEVYAEQERIVLTKFRDCLNRL 503 (602)
Q Consensus 478 ~q~~sel~aeQEr~VLT~fRD~L~~l 503 (602)
=++++|.+|+||..-|-++++.++.+
T Consensus 63 fd~Lne~HA~QEnM~L~eLK~vI~eI 88 (103)
T d1te7a_ 63 LDTLTEKHAEQENMTLTELKKVIADI 88 (103)
T ss_dssp STTTSTHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHhhHHHHhhcCCCHHHHHHHHHHH
Confidence 45789999999999999998888775
No 8
>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=22.67 E-value=20 Score=33.08 Aligned_cols=14 Identities=43% Similarity=1.141 Sum_probs=12.3
Q ss_pred ccCCCCcc-cCCCCC
Q 007469 221 LCSENCRC-MDCKNF 234 (602)
Q Consensus 221 ~CS~~CKC-~dCKN~ 234 (602)
-|+..|+| ..|.|.
T Consensus 114 EC~~~C~C~~~C~Nr 128 (269)
T d1mvha_ 114 ECNSFCSCSMECPNR 128 (269)
T ss_dssp CCCTTSCSCTTCTTC
T ss_pred ECCCCCCCCCCCCCe
Confidence 59999999 689988
No 9
>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=15.77 E-value=38 Score=31.12 Aligned_cols=13 Identities=46% Similarity=1.352 Sum_probs=10.9
Q ss_pred CC-CCCC-CCCCCCh
Q 007469 137 CD-GCNC-VNCHNNV 149 (602)
Q Consensus 137 C~-~CnC-~nC~Nn~ 149 (602)
|+ .|.| ..|.|+.
T Consensus 115 C~~~C~C~~~C~Nr~ 129 (269)
T d1mvha_ 115 CNSFCSCSMECPNRV 129 (269)
T ss_dssp CCTTSCSCTTCTTCT
T ss_pred CCCCCCCCCCCCCee
Confidence 98 8999 4899975
No 10
>d1m0ga_ g.46.1.1 (A:) Metallothionein {Black rockcod (Notothenia coriiceps) [TaxId: 8208]}
Probab=10.37 E-value=50 Score=21.60 Aligned_cols=26 Identities=38% Similarity=0.883 Sum_probs=19.1
Q ss_pred cccccCcccccchhhhhcCCCCCC-CC
Q 007469 115 QCNCKHSRCLKLYCECFASGIYCD-GC 140 (602)
Q Consensus 115 ~CnCKKSkCLKLYCECFAaG~yC~-~C 140 (602)
-|-|..|.|.|--=-|.-.|..|+ .|
T Consensus 2 cc~ccpsgc~kcasgcvckgktcdtsc 28 (30)
T d1m0ga_ 2 CCPCCPSGCTKCASGCVCKGKTCDTSC 28 (30)
T ss_dssp CCTTSCSCCHHHHTSCGGGTSSSSTTT
T ss_pred CCCccccccchhccCceecCCcccccc
Confidence 478899999886555666777887 44
Done!