BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 007472
         (602 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225428300|ref|XP_002279830.1| PREDICTED: uncharacterized protein LOC100245230 [Vitis vinifera]
          Length = 750

 Score =  586 bits (1511), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 334/584 (57%), Positives = 399/584 (68%), Gaps = 41/584 (7%)

Query: 39  RLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFL 98
           RL +  SY   S     +DP+ELPDY EVIEHPMDFGTVR  LA GAYA+LEQFEKDVFL
Sbjct: 188 RLQKKDSYGVFSE---PVDPKELPDYHEVIEHPMDFGTVRKNLAGGAYASLEQFEKDVFL 244

Query: 99  ICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKP 158
           ICSNAMQYNAPDTIYF+QARSI ELAKKNFENLRQDSDDNEPE K  RRGRPPTKN KKP
Sbjct: 245 ICSNAMQYNAPDTIYFKQARSIQELAKKNFENLRQDSDDNEPEPK--RRGRPPTKNIKKP 302

Query: 159 LGRPSLERARSDFSSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDS-SRRFSGS-WND 216
           LGRPSLER  S+FSSD TLA+G ENT  +N DL  G    +KSG  DS  R   G+ ++D
Sbjct: 303 LGRPSLERPGSEFSSDATLATGGENTMWSNHDLRKGALISDKSGPADSFGRSLHGTRYSD 362

Query: 217 LYTGCLAENKLERNDEV--SLSKGYSMKHGKKQVVLDENRRNTYKQFHQSL--RESSVLT 272
             TG  A+ KLER+DE   S+ KG S+KH KK  VLDENRRNTYKQ       RE SVLT
Sbjct: 363 GNTGWSADQKLERHDEFTGSILKGISLKHAKKPFVLDENRRNTYKQSSSIAVGREPSVLT 422

Query: 273 TFDADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVE 332
           TFD +KKQLM VGL++E+GY RSLARFA+NLGPVAWKIAA++IE+ LP GV+FGPGWV E
Sbjct: 423 TFDGEKKQLMPVGLNAEYGYARSLARFASNLGPVAWKIAAKKIEKSLPPGVKFGPGWVGE 482

Query: 333 NDLAPQRPLLLSSATVGLPSSSQPS-LIPENLSSASTHSTIELKGDKLTERPEAEDSSEK 391
           ND+ P +PL + S+T   P SS P   IP ++ S     + +  G  L ER         
Sbjct: 483 NDVIPPKPLFVPSST---PLSSLPGDSIPCSMDSQEDKPSQKTGGIGLPERNVL------ 533

Query: 392 PGPSTQSSLDGHFKKPNTSS------LLVVNRFSEPAKEKAEIIEGLKSQ--LNLVNSSM 443
              S +++L  H  K   +S      +   N+ S P+    E   GL +Q   +++NSS 
Sbjct: 534 ---SARAALANHPGKSLLTSAAASPLINTANKASGPSSGSTEASIGLNAQSGFSILNSSA 590

Query: 444 GAINTRPPFQIHQN-SVIRPGMNGFNGTYGFNMPSQMGKLIGAAGPAGFSFQSPQMVDRI 502
           GA+  RPPFQIHQ  + + PGMNGFNG YGFN+P+QMGK +GAA P GF+ Q+PQM+D I
Sbjct: 591 GAVRPRPPFQIHQGPTALHPGMNGFNGAYGFNIPTQMGKPMGAARPTGFNLQAPQMLDAI 650

Query: 503 SRTDTNFVQPVTASSLNSDDPKLDCSRSLQNLESLGSAPSLP---GNHQPTWQVSPHPKP 559
           SRT  NF  P   ++L  +DPK     +  N     S+P LP   G      +V PHP+P
Sbjct: 651 SRTTPNFGHPGMGNNLTPEDPKFLEKSTTTN----SSSPLLPHPGGEAAAAPRVGPHPQP 706

Query: 560 DL-GLTPQQKPDAVPPDLNVRFRSPGSPNSSRVDSTQPDLALQL 602
              GL PQQ+ D+VPPDLNVRF+SPGSP+SS+VDSTQPDLALQL
Sbjct: 707 SWPGLPPQQRQDSVPPDLNVRFQSPGSPSSSKVDSTQPDLALQL 750


>gi|255559820|ref|XP_002520929.1| bromodomain-containing protein [Ricinus communis]
 gi|223539895|gb|EEF41474.1| bromodomain-containing protein [Ricinus communis]
          Length = 767

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 335/588 (56%), Positives = 407/588 (69%), Gaps = 42/588 (7%)

Query: 38  QRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           +RL +  +Y   S     +DP+ELPDY EVIEHPMDFGTVR KLA G YA LEQFEKDVF
Sbjct: 199 ERLQKKDTYGVFSE---PVDPDELPDYHEVIEHPMDFGTVRKKLAGGVYANLEQFEKDVF 255

Query: 98  LICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETK--VVRRGRPPTKNF 155
           LICSNAMQYNAPDTIYFRQARSI ELAKKNFENLRQDSDDNEPE +  VVRRGRPPTKN 
Sbjct: 256 LICSNAMQYNAPDTIYFRQARSIQELAKKNFENLRQDSDDNEPEPEPTVVRRGRPPTKNL 315

Query: 156 KKPLGRPSLERARSDFSSD-VTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSW 214
           KKP+GRPSL+RA S++S D  TLA+G E+T  +N D   G    +KSGFTDS  R  G  
Sbjct: 316 KKPVGRPSLDRAGSEYSLDAATLATGGESTIWSNNDHRKGPLVSDKSGFTDSLGRSHGPR 375

Query: 215 NDLYTGCLAENKLERNDEV--SLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLT 272
           +D     L +NK ERN+E   S+ KG S+K+GK+Q  LDENRRNTYKQ     RE SVL 
Sbjct: 376 SD--ANWLTDNKFERNEEATGSVLKGNSIKYGKRQFGLDENRRNTYKQLSAG-REPSVLI 432

Query: 273 TFDADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVE 332
           TFD+++KQLM VGL SEHGY RSLARFAAN+G VAWKIA+ RIER LP G++FGPGWV E
Sbjct: 433 TFDSERKQLMAVGLLSEHGYARSLARFAANVGAVAWKIASTRIERSLPPGIKFGPGWVSE 492

Query: 333 NDLAPQRPLLLSSATVGLPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKP 392
           ND++PQR  +LSS   GLP   QP  +P N  +A+T S  E + + L+++PE     ++ 
Sbjct: 493 NDISPQRAFVLSSPPPGLPLLLQPLSLPVN--TAATTSIAESR-ENLSQKPENNMIEDE- 548

Query: 393 GPSTQSSLDGHFKKPNTSSLLVVNRFSEPAK-----EKAEIIEGLKSQ--LNLVNSSMGA 445
               Q + +GH     + S           K     E+ E +E L S     L+N S   
Sbjct: 549 ---KQLASEGHISNALSPSASSSTSPVAAGKPESCAERGEAVERLNSHGGATLLNCSASM 605

Query: 446 INTRPPFQIHQNSVIRPGMNGFNGTYGFNMPSQMGKLIGAAGPAGFSFQSPQMVDRISRT 505
           I   PP QI  NSV R GMN FNGTYGF++P++MGKL+G + PAGF+FQSPQM+D+I ++
Sbjct: 606 IRPNPPLQI--NSVHR-GMNRFNGTYGFDLPAEMGKLVGTSMPAGFNFQSPQMIDKILKS 662

Query: 506 DTNFVQPVTASSLNSDDPKLDCSRSLQNLESLGSAPSLPGNH----------QPTWQVSP 555
           +TNFV P TA+SLNS+ PKL  S    ++   G+ P+ PGN           +P+WQ S 
Sbjct: 663 NTNFVHPATANSLNSEGPKL--SEHSSSINPTGALPN-PGNDMEVPRYELEPRPSWQGSL 719

Query: 556 H-PKPDLGLTPQQKPDAVPPDLNVRFRSPGSPNSSRVDSTQPDLALQL 602
           H PK D GL+PQQK D+VPPDLNVRF+SPGSP+S+RVDS QPDLALQL
Sbjct: 720 HLPKSDAGLSPQQKSDSVPPDLNVRFQSPGSPSSNRVDSAQPDLALQL 767


>gi|224102791|ref|XP_002312802.1| bromodomain protein [Populus trichocarpa]
 gi|222849210|gb|EEE86757.1| bromodomain protein [Populus trichocarpa]
          Length = 758

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 309/572 (54%), Positives = 384/572 (67%), Gaps = 44/572 (7%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D +ELPDY EVIEHPMDFGTVR KL NGAY +LE FE++VFLIC+NAMQYNAPDTIYFR
Sbjct: 206 VDLDELPDYLEVIEHPMDFGTVRKKLTNGAYGSLELFEEEVFLICTNAMQYNAPDTIYFR 265

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSDV 175
           QARSI ELAKKNFENLRQDSDDNE E KVVRRGRPP++NFKK  GRPSL+ A S+F +  
Sbjct: 266 QARSIQELAKKNFENLRQDSDDNEAEPKVVRRGRPPSENFKKSPGRPSLDLAGSEFPTGR 325

Query: 176 TLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDEV-- 233
           TLA+G EN +             EKSGF DSS +F GS N+ Y     +N+ ERNDE   
Sbjct: 326 TLATGGENRS------------SEKSGFADSSGQFHGSRNEAYLST--DNRFERNDETAG 371

Query: 234 SLSKGYSMKHGKKQVVLDENRRNTYKQFHQSL--RESSVLTTFDADKKQLMTVGLHSEHG 291
           S+ KG   KH KK + LDENRRNTYKQFH S   R  SVLTTFDA++KQL+ VGL +EHG
Sbjct: 372 SILKG---KHIKKHLALDENRRNTYKQFHPSAGGRVPSVLTTFDAERKQLVAVGLLTEHG 428

Query: 292 YTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLSSATVGLP 351
           Y RS+ARFAAN+GP +W IA +RIE+ L  GV+FGPGWV END+ PQ+ L  S     L 
Sbjct: 429 YARSIARFAANIGPFSWTIAVKRIEKSLAPGVKFGPGWVGENDIPPQKALFSSPMPSQLA 488

Query: 352 SSSQPSL-----IPENLSSASTHSTIELKGDKLTERPEAEDSSEKPGPSTQSSLDGHFKK 406
                       + E+ ++ +T   ++ K  KL+ +PE +   EK  PST+ S + HF  
Sbjct: 489 PPPSLPPQKPFSVLESSAATATACGVKSKQGKLSAKPEKDIFPEKQVPSTRLS-EAHFSS 547

Query: 407 --PNTS---SLLVVNRFSEPAKEKAEIIEGLKSQ--LNLVNSSMGAINTRPPFQIHQNSV 459
             P+TS   S+  VN+ SEP  E+AE +  L S    N++NSS G +    P Q+HQN  
Sbjct: 548 VPPSTSMTTSVSAVNK-SEPFTERAESVPKLNSHSAFNVLNSSTGVMRQTAPSQLHQNPA 606

Query: 460 IRPGMNGFNGTYGFNMPSQMGKLIGAAGPAGFSFQSPQMVDRISRTDTNFVQPVTASSLN 519
           I PG  GFN TYGFN+ +QMGKLIG A PAG   QS QM D++SRT++N V+   A+S+N
Sbjct: 607 IHPGTIGFNATYGFNLAAQMGKLIGVARPAGLGIQSSQMADKVSRTNSNLVRSANANSIN 666

Query: 520 SDDPKL-DCSRSLQNLESLGS-------APSLPGNHQPTWQ-VSPHPKPDLGLTPQQKPD 570
           S+  K  + S S++   +L +       AP      QPTWQ + P+P+PD G +  QK D
Sbjct: 667 SEKMKFPENSSSIKISGALPNSGNEAVEAPRSVDQEQPTWQGLYPNPRPDSGSSSHQKSD 726

Query: 571 AVPPDLNVRFRSPGSPNSSRVDSTQPDLALQL 602
           AVPPDLNVR++SPGSP+S  +D  QPDLALQL
Sbjct: 727 AVPPDLNVRYQSPGSPSSGCIDPAQPDLALQL 758


>gi|449454289|ref|XP_004144888.1| PREDICTED: uncharacterized protein LOC101218234 [Cucumis sativus]
 gi|449473925|ref|XP_004154023.1| PREDICTED: uncharacterized protein LOC101210731 [Cucumis sativus]
          Length = 776

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 288/574 (50%), Positives = 367/574 (63%), Gaps = 32/574 (5%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DP ELPDY E+I+HPMDFGTVR KL +GAY+TLEQFEKDV LI SNAMQYN+PDTIYFR
Sbjct: 208 VDPNELPDYHEIIDHPMDFGTVREKLTSGAYSTLEQFEKDVLLISSNAMQYNSPDTIYFR 267

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSDV 175
           QAR+I ELAKKNF+NLRQDSDDNEPE KVVRRGRPPTKN KKPLGRPSLERA S+FS D 
Sbjct: 268 QARTIQELAKKNFKNLRQDSDDNEPEPKVVRRGRPPTKNLKKPLGRPSLERAGSEFSPDA 327

Query: 176 TLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWN--DLYTGCLAENKLERNDEV 233
           TLA+G EN A  + DL  G  HLEK  F D S RFS S N  D        ++ +R++++
Sbjct: 328 TLATGGEN-ANRSSDLRKGLHHLEKPSFADFSGRFSFSSNNSDAAFNLFNPSRFDRSEDI 386

Query: 234 SLS--KGYSMKHGKKQVVLDENRRNTYKQFHQ--SLRESSVLTTFDADKKQLMTVGLHSE 289
           + S  +  S++ GKK +V +ENRRNTY QF    ++ E +VL TFD ++K LM VGL  E
Sbjct: 387 TGSALRFNSVRQGKKPIVSEENRRNTYSQFQAATAMLEPAVLNTFDRERKVLMPVGLFLE 446

Query: 290 HGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLSSATVG 349
           H Y RSLARFAA+LG VAW +A+++IER LP+G  FGPGWV+END+ P+R + L  A   
Sbjct: 447 HAYARSLARFAADLGSVAWTVASKKIERSLPSGSGFGPGWVIENDITPKR-VFLPQAEPS 505

Query: 350 LPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPGPSTQS-SLDGHFKKPN 408
             S+ QP L  E+        T E K  + ++  EA+ S +     +++ S  G   +P 
Sbjct: 506 KMSTLQPFLGHESSDPDVKPLTNEQKRVRSSDNSEADTSHKTHDELSRAPSSGGQVNRPP 565

Query: 409 TSSLLV------VNRFSEPAKEKAEIIEGLK--SQLNLVNSSMGAINTRPPFQIHQNSVI 460
           T  + V        + SE  K +AE +EG K     N++ SS+    +RP F  H +  I
Sbjct: 566 TEFVAVSSSPSSTQQSSEQCKGQAETVEGSKPSGNYNVLESSIPI--SRPSFHKHHSPSI 623

Query: 461 RPGMNGFNGTYGFNMPSQMGKLIGAAGPAGFSFQSPQMVDRISRTDTNFVQPVTASSLNS 520
            PGMNGFNG YGF++ +  GKLIG +  AG   QS QM++ ISRT+ NF+ P  A++LN 
Sbjct: 624 HPGMNGFNGAYGFDLSAHRGKLIGPSDSAGVKPQSSQMLETISRTNANFILPAMATNLNP 683

Query: 521 DDPKL----------DCSRSLQNLESLGSAPSLPGNHQPTWQVSPHP--KPDLGLTPQQK 568
            +PK             S      + L +  + P    P W     P  K D  +T   K
Sbjct: 684 KEPKCPENNPSTTNSSSSLVGSGSDGLINPVASPHLRSP-WHQGKQPAEKTDAVVTTIYK 742

Query: 569 PDAVPPDLNVRFRSPGSPNSSRVDSTQPDLALQL 602
           P++VPPDLNVRF+SPGSP+SS+VDS  PDL LQL
Sbjct: 743 PESVPPDLNVRFKSPGSPSSSKVDSAHPDLVLQL 776


>gi|449528661|ref|XP_004171322.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101210731,
           partial [Cucumis sativus]
          Length = 622

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 287/574 (50%), Positives = 366/574 (63%), Gaps = 32/574 (5%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DP ELPDY E+I+HPMDFGTVR KL +GAY+TLEQFEKDV LI SNAMQYN+PDTIYFR
Sbjct: 54  VDPNELPDYHEIIDHPMDFGTVREKLTSGAYSTLEQFEKDVLLISSNAMQYNSPDTIYFR 113

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSDV 175
           QAR+I EL KKNF+NLRQDSDDNEPE KVVRRGRPPTKN KKPLGRPSLERA S+FS D 
Sbjct: 114 QARTIQELXKKNFKNLRQDSDDNEPEPKVVRRGRPPTKNLKKPLGRPSLERAGSEFSPDA 173

Query: 176 TLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWN--DLYTGCLAENKLERNDEV 233
           TLA+G EN A  + DL  G  HLEK  F D S RFS S N  D        ++ +R++++
Sbjct: 174 TLATGGEN-ANRSSDLRKGLHHLEKPSFADFSGRFSFSSNNSDAAFNLFNPSRFDRSEDI 232

Query: 234 SLS--KGYSMKHGKKQVVLDENRRNTYKQFHQ--SLRESSVLTTFDADKKQLMTVGLHSE 289
           + S  +  S++ GKK +V +ENRRNTY QF    ++ E +VL TFD ++K LM VGL  E
Sbjct: 233 TGSALRFNSVRQGKKPIVSEENRRNTYSQFQAATAMLEPAVLNTFDRERKVLMPVGLFLE 292

Query: 290 HGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLSSATVG 349
           H Y RSLARFAA+LG VAW +A+++IER LP+G  FGPGWV+END+ P+R + L  A   
Sbjct: 293 HAYARSLARFAADLGSVAWTVASKKIERSLPSGSGFGPGWVIENDITPKR-VFLPQAEPS 351

Query: 350 LPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPGPSTQS-SLDGHFKKPN 408
             S+ QP L  E+        T E K  + ++  EA+ S +     +++ S  G   +P 
Sbjct: 352 KMSTLQPFLGHESSDPDVKPLTNEQKRVRSSDNSEADTSHKTHDELSRAPSSGGQVNRPP 411

Query: 409 TSSLLV------VNRFSEPAKEKAEIIEGLK--SQLNLVNSSMGAINTRPPFQIHQNSVI 460
           T  + V        + SE  K +AE +EG K     N++ SS+    +RP F  H +  I
Sbjct: 412 TEFVAVSSSPSSTQQSSEQCKGQAETVEGSKPSGNYNVLESSIPI--SRPSFHKHHSPSI 469

Query: 461 RPGMNGFNGTYGFNMPSQMGKLIGAAGPAGFSFQSPQMVDRISRTDTNFVQPVTASSLNS 520
            PGMNGFNG YGF++ +  GKLIG +  AG   QS QM++ ISRT+ NF+ P  A++LN 
Sbjct: 470 HPGMNGFNGAYGFDLSAHRGKLIGPSDSAGVKPQSSQMLETISRTNANFILPAMATNLNP 529

Query: 521 DDPKL----------DCSRSLQNLESLGSAPSLPGNHQPTWQVSPHP--KPDLGLTPQQK 568
            +PK             S      + L +  + P    P W     P  K D  +T   K
Sbjct: 530 KEPKCPENNPSTTNSSSSLVGSGSDGLINPVASPHLRSP-WHQGKQPAEKTDAVVTTIYK 588

Query: 569 PDAVPPDLNVRFRSPGSPNSSRVDSTQPDLALQL 602
           P++VPPDLNVRF+SPGSP+SS+VDS  PDL LQL
Sbjct: 589 PESVPPDLNVRFKSPGSPSSSKVDSAHPDLVLQL 622


>gi|359491912|ref|XP_002272566.2| PREDICTED: uncharacterized protein LOC100244510 [Vitis vinifera]
          Length = 691

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 252/560 (45%), Positives = 322/560 (57%), Gaps = 75/560 (13%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY ++IEHPMDFGTVR KL  G Y+ LEQFE D+FLICSNAMQYNAPDT+YFR
Sbjct: 194 VDPEELPDYHDIIEHPMDFGTVRKKLDGGLYSNLEQFESDIFLICSNAMQYNAPDTVYFR 253

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSDV 175
           QAR+I ELAK++F NLRQ+ DD EP+ K+VRRGRPPTK+ KK LG   LE    + SS+ 
Sbjct: 254 QARTIQELAKRDFANLRQEGDDGEPQPKIVRRGRPPTKHLKKSLGSSPLEHVAPETSSEA 313

Query: 176 TLASGAENTALTNR-DLGNG-TPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDE- 232
           TLA+G +N+  +N  +L  G TP   +        ++    +D Y+  L+E     N+E 
Sbjct: 314 TLATGGDNSISSNSYNLRKGPTPCKFRPADISVKAQYGSRNSDNYSSWLSE----WNNEF 369

Query: 233 -VSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVGLHSEHG 291
             S+ KG S KHGKK   LDENRR+TYK    S  E SVLTT   + KQLM+VGLHS+HG
Sbjct: 370 PASILKGVSTKHGKKPFELDENRRDTYKHPLASNHEPSVLTTLHGELKQLMSVGLHSDHG 429

Query: 292 YTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLSSATVGLP 351
           Y RSLARFAA+LG   WKIAA++I   LP GV FGPGWV EN+   QRP L         
Sbjct: 430 YARSLARFAADLGQDVWKIAAKKIANVLPVGVEFGPGWVGENEALAQRPSL--------- 480

Query: 352 SSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPGPSTQSSLDGHFKKPNTSS 411
                                      L E  ++ ++S  P P    +  G       SS
Sbjct: 481 ---------------------------LCENQKSSNNSTPPHPQPPPTTSG-------SS 506

Query: 412 LLVVNRFSEPAKEKA-EIIEGLKSQLNLVNSSMGAINTRP-PFQIHQNSVIRPGMNGFNG 469
           L V NR S P KE++ E + GL SQ+ L         +RP P +IHQ   I PG+NGF+G
Sbjct: 507 LFVANRSSLPCKEESGEAVRGLNSQIELT--------SRPAPPEIHQTLGIHPGLNGFSG 558

Query: 470 TYGFNMPSQMG--KLIGAAGPAGFSFQSPQMVDRISRTDTNFVQPVTASSLNSDDPKLDC 527
            +GFN  SQMG  +L   AG +       Q +  +S + +  + P+ A+   SD P+   
Sbjct: 559 GFGFNPSSQMGMARLAMLAGNSSTESMPSQKLGMVSNSSSIPIHPMQANYFASDRPESPV 618

Query: 528 SRSLQNLESLGSAPSLPGNHQPTWQVSPHPKPDLG--LTPQQKPDAVPPDLNVRFRSPGS 585
           S +     +L +  SL   H P       P+  +G   + Q  P  +PPDLNVRF++PGS
Sbjct: 619 SSNTPRSRNLAAPGSLMKVHTP-------PEVLIGGKASWQGLPQRIPPDLNVRFQAPGS 671

Query: 586 PNSSR---VDSTQPDLALQL 602
           P+SS      S QPDLALQL
Sbjct: 672 PSSSTTPIASSQQPDLALQL 691


>gi|147814821|emb|CAN74748.1| hypothetical protein VITISV_012026 [Vitis vinifera]
          Length = 688

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 250/560 (44%), Positives = 320/560 (57%), Gaps = 75/560 (13%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY ++IEHPMDFGTVR KL  G Y+ LEQFE D+FLICSNAMQYNAPDT+YFR
Sbjct: 191 VDPEELPDYHDIIEHPMDFGTVRKKLDGGLYSNLEQFESDIFLICSNAMQYNAPDTVYFR 250

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSDV 175
           QAR+I ELAK++F NLRQ+ DD EP+ K+VRRGRPPTK+ KK LG   LE    + SS+ 
Sbjct: 251 QARTIQELAKRDFANLRQEGDDGEPQPKIVRRGRPPTKHLKKSLGSSPLEHVAPETSSEA 310

Query: 176 TLASGAENTALTNR-DLGNG-TPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDE- 232
           TLA+G +N+  +N  +L  G TP   +        ++    +D Y+  L+E     N+E 
Sbjct: 311 TLATGGDNSISSNSYNLRKGPTPCKFRPADISVKAQYGSRNSDNYSSWLSE----WNNEF 366

Query: 233 -VSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVGLHSEHG 291
             S+ KG S KHGKK   LDENRR+TYK    S  E SVLTT   + KQLM+VGLHS+HG
Sbjct: 367 PASILKGVSTKHGKKPFELDENRRDTYKHPLASNHEPSVLTTLHGELKQLMSVGLHSDHG 426

Query: 292 YTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLSSATVGLP 351
           Y RSLARFAA+LG   WKIAA++I   LP GV FGPGWV EN+   QRP           
Sbjct: 427 YARSLARFAADLGQDVWKIAAKKIANVLPVGVEFGPGWVGENEALAQRP----------- 475

Query: 352 SSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPGPSTQSSLDGHFKKPNTSS 411
                SL+ EN  S++                           ++           + SS
Sbjct: 476 -----SLLCENQKSSN---------------------------NSTPPHPQPPPTTSGSS 503

Query: 412 LLVVNRFSEPAKEKA-EIIEGLKSQLNLVNSSMGAINTRP-PFQIHQNSVIRPGMNGFNG 469
           L V NR S P KE++ E + GL SQ+ L         +RP P +IHQ   I PG+NGF+G
Sbjct: 504 LFVANRSSLPCKEESGEAVRGLNSQIELT--------SRPAPPEIHQTLGIHPGLNGFSG 555

Query: 470 TYGFNMPSQMG--KLIGAAGPAGFSFQSPQMVDRISRTDTNFVQPVTASSLNSDDPKLDC 527
            +GFN  SQMG  +L   AG +       Q +  +S + +  + P+ A+   SD P+   
Sbjct: 556 GFGFNPSSQMGMARLAMLAGNSSTESXPSQKLGMVSNSSSIPIHPMQANYFASDRPESPV 615

Query: 528 SRSLQNLESLGSAPSLPGNHQPTWQVSPHPKPDLG--LTPQQKPDAVPPDLNVRFRSPGS 585
           S +     +L    SL   H P       P+  +G   + Q  P  +PPDLNVRF++PGS
Sbjct: 616 SSNTPRSRNLAEPGSLMKVHTP-------PEVLIGGKASWQGLPQRIPPDLNVRFQAPGS 668

Query: 586 PNSSR---VDSTQPDLALQL 602
           P+SS      S QPDLALQL
Sbjct: 669 PSSSTTPIASSQQPDLALQL 688


>gi|224132440|ref|XP_002328271.1| bromodomain protein [Populus trichocarpa]
 gi|222837786|gb|EEE76151.1| bromodomain protein [Populus trichocarpa]
          Length = 546

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 187/288 (64%), Positives = 219/288 (76%), Gaps = 21/288 (7%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  ELPDY EVIEHPMDFGTVR KL NGAYA+LEQFEKDVFLIC+NAMQYNAPDTIYFR
Sbjct: 214 VDLNELPDYLEVIEHPMDFGTVRKKLLNGAYASLEQFEKDVFLICTNAMQYNAPDTIYFR 273

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSDV 175
           QARSI ELA+KNFENLRQD+DDNE E KVV+RGRPP++N KK  GRPSL+ A S+F S  
Sbjct: 274 QARSIQELARKNFENLRQDTDDNEAEHKVVKRGRPPSENLKKSPGRPSLDPAGSEFPSGA 333

Query: 176 TLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDEV-- 233
           TLA+G EN               EK GF DSS +F GS N+ Y+  L +N+ ER+DE   
Sbjct: 334 TLATGGENRP------------SEKPGFADSSEQFHGSRNEAYS--LTDNRFERHDETAG 379

Query: 234 SLSKGYSMKHGKKQVVLDENRRNTYKQFHQSL--RESSVLTTFDADKKQLMTVGLHSEHG 291
           S+ KG   KH KK + +DENRRNTYKQFH S   R  SVLTTFDA++KQL+ VGL +EHG
Sbjct: 380 SVLKG---KHSKKPLAIDENRRNTYKQFHPSAGGRVPSVLTTFDAERKQLVAVGLLTEHG 436

Query: 292 YTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQR 339
           Y RS+ARFAAN+GP +W IA ++IER L  G++FGPGWV END+ PQR
Sbjct: 437 YARSIARFAANIGPFSWTIAVKKIERSLAPGIKFGPGWVGENDITPQR 484


>gi|297745559|emb|CBI40724.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  360 bits (925), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 237/556 (42%), Positives = 298/556 (53%), Gaps = 127/556 (22%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY ++IEHPMDFGTVR KL  G Y+ LEQFE D+FLICSNAMQYNAPDT+YFR
Sbjct: 197 VDPEELPDYHDIIEHPMDFGTVRKKLDGGLYSNLEQFESDIFLICSNAMQYNAPDTVYFR 256

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSDV 175
           QAR+I ELAK++F NLRQ+ DD EP+ K+VRRGRPPTK+ KK LG   LE    + SS+ 
Sbjct: 257 QARTIQELAKRDFANLRQEGDDGEPQPKIVRRGRPPTKHLKKSLGSSPLEHVAPETSSEA 316

Query: 176 TLASGAENTALTNR-DLGNG-TPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDE- 232
           TLA+G +N+  +N  +L  G TP   +        ++    +D Y+  L+E     N+E 
Sbjct: 317 TLATGGDNSISSNSYNLRKGPTPCKFRPADISVKAQYGSRNSDNYSSWLSE----WNNEF 372

Query: 233 -VSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVGLHSEHG 291
             S+ KG S KHGKK   LDENRR+TYK    S  E SVLTT   + KQLM+VGLHS+HG
Sbjct: 373 PASILKGVSTKHGKKPFELDENRRDTYKHPLASNHEPSVLTTLHGELKQLMSVGLHSDHG 432

Query: 292 YTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLSSATVGLP 351
           Y RSLARFAA+LG   WKIAA++I   LP GV FGPGWV EN+   QRP           
Sbjct: 433 YARSLARFAADLGQDVWKIAAKKIANVLPVGVEFGPGWVGENEALAQRP----------- 481

Query: 352 SSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPGPSTQSSLDGHFKKPNTSS 411
                SL+ EN  S++                           ++           + SS
Sbjct: 482 -----SLLCENQKSSN---------------------------NSTPPHPQPPPTTSGSS 509

Query: 412 LLVVNRFSEPAKEKA-EIIEGLKSQLNLVNSSMGAINTRP-PFQIHQNSVIRPGMNGFNG 469
           L V NR S P KE++ E + GL SQ+ L         +RP P +IHQ   I PG+NGF+G
Sbjct: 510 LFVANRSSLPCKEESGEAVRGLNSQIELT--------SRPAPPEIHQTLGIHPGLNGFSG 561

Query: 470 TYGFNMPSQMGKLIGAAGPAGFSFQSPQMVDRISRTDTNFVQPVTASSLNSDDPKLDCSR 529
             GF                GF+  S   + R++                          
Sbjct: 562 --GF----------------GFNPSSQMGMARLAM------------------------- 578

Query: 530 SLQNLESLGSAPSLPGNHQPTWQVSPHPKPDLGLTPQQKPDAVPPDLNVRFRSPGSPNSS 589
                        L GN   + +  P  K  +GL     P  +PPDLNVRF++PGSP+SS
Sbjct: 579 -------------LAGNS--STESMPSQKLGMGL-----PQRIPPDLNVRFQAPGSPSSS 618

Query: 590 R---VDSTQPDLALQL 602
                 S QPDLALQL
Sbjct: 619 TTPIASSQQPDLALQL 634


>gi|297744477|emb|CBI37739.3| unnamed protein product [Vitis vinifera]
          Length = 4608

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 201/356 (56%), Positives = 243/356 (68%), Gaps = 17/356 (4%)

Query: 45   SYCCSSSIDFK----MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLIC 100
            S+ C+  +  K    +DP  LP  C ++ + + F ++  K+    Y       KDVFLIC
Sbjct: 4259 SFVCNLWVWTKSIVNVDPLTLPSVC-IVRYELRFLSIFIKMYRIVYRKFLTIMKDVFLIC 4317

Query: 101  SNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLG 160
            SNAMQYNAPDTIYF+QARSI ELAKKNFENLRQDSDDNEPE K  RRGRPPTKN KKPLG
Sbjct: 4318 SNAMQYNAPDTIYFKQARSIQELAKKNFENLRQDSDDNEPEPK--RRGRPPTKNIKKPLG 4375

Query: 161  RPSLERARSDFSSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDS-SRRFSGS-WNDLY 218
            RPSLER  S+FSSD TLA+G ENT  +N DL  G    +KSG  DS  R   G+ ++D  
Sbjct: 4376 RPSLERPGSEFSSDATLATGGENTMWSNHDLRKGALISDKSGPADSFGRSLHGTRYSDGN 4435

Query: 219  TGCLAENKLERNDEV--SLSKGYSMKHGKKQVVLDENRRNTYKQFHQSL--RESSVLTTF 274
            TG  A+ KLER+DE   S+ KG S+KH KK  VLDENRRNTYKQ       RE SVLTTF
Sbjct: 4436 TGWSADQKLERHDEFTGSILKGISLKHAKKPFVLDENRRNTYKQSSSIAVGREPSVLTTF 4495

Query: 275  DADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVEND 334
            D +KKQLM VGL++E+GY RSLARFA+NLGPVAWKIAA++IE+ LP GV+FGPGWV END
Sbjct: 4496 DGEKKQLMPVGLNAEYGYARSLARFASNLGPVAWKIAAKKIEKSLPPGVKFGPGWVGEND 4555

Query: 335  LAPQRPLLLSSATVGLPSSSQPS-LIPENLSSASTHSTIELKGDKLTERPEAEDSS 389
            + P +PL + S+T   P SS P   IP ++ S     + +  G  L ER + +  S
Sbjct: 4556 VIPPKPLFVPSST---PLSSLPGDSIPCSMDSQEDKPSQKTGGIGLPERNQWKHGS 4608



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/38 (81%), Positives = 34/38 (89%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFE 93
           +DP+ELPDY EVIEHPMDFGTVR  LA GAYA+LEQFE
Sbjct: 151 VDPKELPDYHEVIEHPMDFGTVRKNLAGGAYASLEQFE 188


>gi|224086052|ref|XP_002307796.1| bromodomain protein [Populus trichocarpa]
 gi|222857245|gb|EEE94792.1| bromodomain protein [Populus trichocarpa]
          Length = 617

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 226/573 (39%), Positives = 300/573 (52%), Gaps = 128/573 (22%)

Query: 39  RLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFL 98
           RL +  +Y   S     +DPEELPDY E++E+PMDF T R KL  GAY  LEQFEKDV L
Sbjct: 164 RLQKKDTYGVFSE---PVDPEELPDYFEIVENPMDFSTARKKLDEGAYTNLEQFEKDVLL 220

Query: 99  ICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPP-TKNFKK 157
           ICSNAMQYN+ DTIY+RQAR++ E+AKK+FE+LRQDSDD+EP+ KVVRRGRPP T   K 
Sbjct: 221 ICSNAMQYNSADTIYYRQARAMQEIAKKDFEHLRQDSDDSEPQPKVVRRGRPPGTGKLKN 280

Query: 158 PLGRPSLERARSDFSSDVTLASGAENTALTN-RDLGNGTPHLEKSGFTDSSRRFS-GSWN 215
            L R  ++R   + SSD TLA+G +N +L+N  +L   + +  K    DS  R S GS N
Sbjct: 281 ALERSPVDRVGPEASSDATLATGGDNNSLSNGYNLRRSSSY--KYQPADSLVRASHGSHN 338

Query: 216 DL-YTGCLAENKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTF 274
           +  ++  L+E   E     S+ K   +K+GKK +VLDEN+R+TYK    S  E SVL TF
Sbjct: 339 NENHSTWLSE--WENEFPASVVKAV-IKYGKKPIVLDENKRDTYKHPLDS-HEPSVLMTF 394

Query: 275 DADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVEND 334
           D + KQLM VGL SEHGY RSLARFAA+LGPV W++A+++IE  LP G+ FGPGWV EN 
Sbjct: 395 DGELKQLMAVGLSSEHGYARSLARFAADLGPVVWRMASKKIESVLPTGIEFGPGWVGENK 454

Query: 335 LAPQRPLLLSSATVGLPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPGP 394
                                                  ++  K++  P +++   +  P
Sbjct: 455 --------------------------------------AMEKHKVSNSPISDNHLSRFQP 476

Query: 395 STQSSLDGHFKKPNTSSLLVVNRFSEPAKEKAEIIEGL--KSQLNLVNSSMGAINTRPPF 452
           +T  S D  + K                ++  E + GL  K++L  +NS+ G + + P  
Sbjct: 477 ATSLSRDATWSK----------------EDMLETVGGLNSKNELTTLNSATGGMKSLPTV 520

Query: 453 QIHQNSVIRPGMNGFNGTYGFNMPSQMGKLIGAAGPAG-FSFQSPQMVDRISRTDTNFVQ 511
            + Q  +I P MNGF+G +G+N  SQ    IG   P G FS +               + 
Sbjct: 521 SMQQKPMIHPDMNGFSGGFGYNSSSQ----IGTVAPTGKFSLEK--------------LH 562

Query: 512 PVTASSLNSDDPKLDCSRSLQNLESLGSAPSLPGNHQPTWQVSPHPKPDLGLTPQQKPDA 571
           P   S +                     A  LP + Q             G  P      
Sbjct: 563 PAVPSQMF-------------------GAGFLPYHQQ-------------GTVP------ 584

Query: 572 VPPDLNVRFRSPGSPNSSRVDST--QPDLALQL 602
            PPDLNV F +PGSP+SS    +  QPDL LQL
Sbjct: 585 FPPDLNVGFMAPGSPSSSVPIGSPRQPDLVLQL 617


>gi|224061867|ref|XP_002300638.1| bromodomain protein [Populus trichocarpa]
 gi|222842364|gb|EEE79911.1| bromodomain protein [Populus trichocarpa]
          Length = 632

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 229/570 (40%), Positives = 296/570 (51%), Gaps = 124/570 (21%)

Query: 39  RLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFL 98
           RL +  +Y   S     +DPEELPDY +++E+PMDF TVR KL  GAYA LEQFEKDV L
Sbjct: 181 RLQKKDTYGVFSE---PVDPEELPDYFDIVENPMDFSTVRKKLDEGAYAHLEQFEKDVLL 237

Query: 99  ICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPT-KNFKK 157
           ICSNAMQYN  DTIYFRQAR++ ELAKK+FENLRQDSDD+EP+TKV RRGRPP     KK
Sbjct: 238 ICSNAMQYNPSDTIYFRQARAMQELAKKDFENLRQDSDDSEPQTKVARRGRPPALGKLKK 297

Query: 158 PLGRPSLERARSDFSSDVTLASGAENTALTN-RDLGNGTPHLEKSGFTDSSRRFSGSWND 216
            L R  ++R   + SSD TLA+G ++  L+N  +L   + +  + G  D+  R S S ++
Sbjct: 298 ALERSPIDRVGPEASSDATLATGGDHNNLSNGYNLRKSSSYKYQPG--DAFVRASYS-SE 354

Query: 217 LYTGCLAENKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDA 276
            Y+  L+E   E     S+ K   MK+GKK  VLDEN+R+TYK    S  E S+L+TF+ 
Sbjct: 355 NYSTWLSE--WENEFPASVVKAV-MKYGKKPFVLDENKRDTYKHPLGS-HEPSILSTFEG 410

Query: 277 DKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLA 336
           + KQL+ VGL SEHGY RSLARFAA+LGPV W+IA+++IE  LP G+ FGPGWV EN   
Sbjct: 411 ELKQLVVVGLSSEHGYARSLARFAADLGPVVWRIASKKIESVLPTGLEFGPGWVGENKAM 470

Query: 337 PQRPLLLSSATVGLPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPGPST 396
            ++ +L                   NL S +  S  +                    P+ 
Sbjct: 471 EKQKIL------------------NNLVSDNHLSRFQ--------------------PAA 492

Query: 397 QSSLDGHFKKPNTSSLLVVNRFSEPAKEKAEIIEGLKSQ--LNLVNSSMGAINTRPPFQI 454
            SS +  +           NR   P     E + GL  Q  L  +NS  G + + P  QI
Sbjct: 493 SSSREAAW-----------NREGLP-----ETVGGLNPQNELATLNSGAGGMKSMPSLQI 536

Query: 455 HQNSVIRPGMNGFNGTYGFNMPSQMGKLIGAAGPAGFSFQSPQMVDRISRTDTNFVQPVT 514
            Q  +I P MNGF+G +G+N   Q G                     ++RT    V P  
Sbjct: 537 QQKPIIHPDMNGFSGGFGYNSSPQPG---------------------MART----VAPTG 571

Query: 515 ASSLNSDDPKLDCSRSLQNLESLGSAPSLPGNHQPTWQVSPHPKPDLGLTPQQKPDAVPP 574
                    KL+  ++    +  G    LP   Q T    P                   
Sbjct: 572 ---------KLNLEQTAVPSQMFGVG-FLPYQQQGTVPFPP------------------- 602

Query: 575 DLNVRFRSPGSPNSSRVDST--QPDLALQL 602
           DLNV F +PGSP SS    +  QPDLALQL
Sbjct: 603 DLNVGFLAPGSPTSSVPIGSPRQPDLALQL 632


>gi|255539242|ref|XP_002510686.1| bromodomain-containing protein [Ricinus communis]
 gi|223551387|gb|EEF52873.1| bromodomain-containing protein [Ricinus communis]
          Length = 675

 Score =  317 bits (811), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 225/576 (39%), Positives = 295/576 (51%), Gaps = 88/576 (15%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY +++EHPMDF TVR KL  GAY  LEQFEKDVFLICSNAMQYN  DTIY+R
Sbjct: 159 VDPEELPDYHDIVEHPMDFSTVRKKLDRGAYFNLEQFEKDVFLICSNAMQYNPSDTIYYR 218

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSDV 175
           QARSI ELAKK+FENLRQDSDD EP+  V RRGRPP K  KK L R  L+R   D SSD 
Sbjct: 219 QARSIQELAKKDFENLRQDSDDGEPQPNVARRGRPPGK-LKKSLERSPLDRVSPDCSSDA 277

Query: 176 TLASGAENTALTN-RDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDEVS 234
           T A G +NT  TN  +L     +  +              ++ Y   ++E   E     S
Sbjct: 278 THAFGGDNTNETNGYNLRRTNSYKYRPADVLVRTSHGSHSSETYAAWMSE--WENEFPAS 335

Query: 235 LSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVGLHSEHGYTR 294
           + K   +K+GKK   +DENRR+TYKQ   S  E S L  F+ + KQL+ VGL+SE+GY R
Sbjct: 336 VLKAV-LKYGKKPYAVDENRRDTYKQPLASTPEPSSLNFFEGELKQLVAVGLNSEYGYAR 394

Query: 295 SLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLSSATVGLPSSS 354
           SLARFAA+LGPV WKIA+++IE  LP G+ FGPGWV E                      
Sbjct: 395 SLARFAADLGPVVWKIASKKIESALPTGLEFGPGWVGE---------------------- 432

Query: 355 QPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPGPSTQSSLDGHFKKPNTSSL-- 412
                                 DK+ +  +    S++P  S  S  + HF +P  ++   
Sbjct: 433 ----------------------DKVVDGQQKFQFSDRPKVSNSSIFNDHFSRPQPTATGT 470

Query: 413 --LVVNRFSEPAKEK-AEIIEGLKSQLNLV--NSSMGAINTRPPFQIHQNSVIRPGMNGF 467
              V +R S   +E   E +  + SQ  L+  NSS G IN      + Q  +I   +NG 
Sbjct: 471 NSAVTSRCSARTREDWMENVGKISSQSELISTNSSTGGINYMSSVLVQQKPIIHSDINGL 530

Query: 468 NGTYGFNMPS---QMGKLIGAAGPAGFSFQS-PQMVDRISRTDTNFVQPVTASSLNSDDP 523
           +G   +N  S     G++    G A     + P  V  +  T T+ + P+  +  + +  
Sbjct: 531 SGGLRYNNCSPHTGTGRVGIPTGKASTEHAAVPSQVFGMVSTSTSTLCPMPGNDCSLNKA 590

Query: 524 KLDCSRSLQNLESLGSAPSLPGN------------HQPTWQ---VSPHPKPDLGLTPQQK 568
           KL  S +   L   G + +L  N             +P+W     S H         Q++
Sbjct: 591 KL--SETWNGLLQSGDSSALGSNLDSQTFLNAGVDGKPSWHRVSSSYH---------QEQ 639

Query: 569 PDAVPPDLNVRFRSPGSPNSSRVDST--QPDLALQL 602
               PPDLNV F +P SP+SS    +  QPDLALQL
Sbjct: 640 FFQFPPDLNVGFLAPNSPSSSVPIGSPQQPDLALQL 675


>gi|356509582|ref|XP_003523526.1| PREDICTED: uncharacterized protein LOC100811115 [Glycine max]
          Length = 652

 Score =  288 bits (737), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 218/563 (38%), Positives = 299/563 (53%), Gaps = 77/563 (13%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY ++I+HPMDFGTVR KL  G Y  LE FEKDVFLICSNAMQYN+ DTIY R
Sbjct: 151 VDPEELPDYLDIIKHPMDFGTVRKKLDGGLYTDLEHFEKDVFLICSNAMQYNSSDTIYHR 210

Query: 116 QARSIHELAKKNFENLRQDSDDN-EPETKVVRRGRPPTKNFKKP--LGRPSLERARSDFS 172
           QAR++ E+A+K+FENLRQDSDD+ EP+ K+V+RGRPP K+ +K   LG P  ER   + S
Sbjct: 211 QARAMQEIARKDFENLRQDSDDDSEPQPKIVQRGRPPGKHSRKSLGLGMPPPERVGPESS 270

Query: 173 SDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSS-RRFSGSWNDLYTGCLAENKLERND 231
           SD TLASG +  + +N       P   K   TDSS R ++ ++N    G +  ++ E   
Sbjct: 271 SDATLASGGDIASGSNGYNLRKVP--SKFQPTDSSARAYNSTFNS--GGYVGWSEWENEF 326

Query: 232 EVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVGLHSEHG 291
             S+ K   +++GKKQ V+DE RR+TYK       E  VL+T + + KQL+ VG+H +H 
Sbjct: 327 PASVVKAV-LRYGKKQFVVDETRRDTYKNPVTLGNERPVLSTVEDEFKQLLAVGVHMKHS 385

Query: 292 YTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLSSATVGLP 351
           Y RSLA FAA+LGPV WKIAA +I   LPAG  FGPGWV E+D + QR            
Sbjct: 386 YARSLAHFAADLGPVVWKIAASKISSVLPAGHDFGPGWVSEDDGSSQR------------ 433

Query: 352 SSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPGPSTQSSLDGHFKKPNTSS 411
                            H  +  +G + ++ P  ED   +            F  P + S
Sbjct: 434 ----------------RHFPVCDEG-RTSDPPVPEDYRSR------------FSSP-SGS 463

Query: 412 LLVVNRFSEPAKEKAEI-IEGLKSQLNLVNSSMGAINTRPPFQIHQNSVIRPGMNGFNGT 470
           L + NR   P  +  ++ I+  +++LN V +  G   +  P +I Q S++     G    
Sbjct: 464 LPLANR---PFYQSGDMAIDNYQNELNPVINIPGGSESITPMRIQQESMVHSDDFGSCDR 520

Query: 471 YGFNMPSQMGKLIGAAGPAGFSFQS--PQMVDRISRTDTNFVQPVTASSLNSDDPKLDCS 528
            G N PSQM K++  A   G S     PQM D         + P++   ++++       
Sbjct: 521 LGSNFPSQM-KMVRLADLTGTSSAGVVPQMFD---------MDPISNRIVHTNVDSSFKG 570

Query: 529 RSLQNLESLGSAPSL---PGNHQPTWQVSPHPKPD---LGLTPQQKPDAVPPDLNVRFRS 582
           + L  L  L S   L   PG    +W      K     L +  +Q   A+  DLN R  +
Sbjct: 571 QHLSKLSQLDSGNLLSREPGFEPQSWPQGLAGKSSWQGLEVPTKQNSFALANDLNGRIGT 630

Query: 583 PGSPNSSRVDS---TQPDLALQL 602
             SP SS V++    QP+LALQL
Sbjct: 631 TNSP-SSNVEAGSQLQPNLALQL 652


>gi|356517927|ref|XP_003527637.1| PREDICTED: uncharacterized protein LOC100783010 [Glycine max]
          Length = 665

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 222/572 (38%), Positives = 300/572 (52%), Gaps = 94/572 (16%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY ++I+HPMDFGTVR KL +G Y  LE FE DVFLICSNAMQYN+ DTIY R
Sbjct: 163 VDPEELPDYHDIIKHPMDFGTVRKKLDDGLYTDLEHFEIDVFLICSNAMQYNSSDTIYHR 222

Query: 116 QARSIHELAKKNFENLRQDSDDN-EPETKVVRRGRPPTKNFKKP--LGRPSLERARSDFS 172
           QAR++ E+A+K+FENLRQDSDD+ EP+ K+V++GRPP K+ +K   LG P  ER   + S
Sbjct: 223 QARAMQEIARKDFENLRQDSDDDSEPQPKIVQKGRPPGKHSRKSLGLGMPPSERVGPESS 282

Query: 173 SDVTLASGAENTALTNRDLGNGTP--HLEK--SGF--TDSS-RRFSGSWND-LYTGCLAE 224
           SD TLASGA        D+G+G+   +L K  S F  TDSS R ++ ++N   YTGC   
Sbjct: 283 SDATLASGA--------DIGSGSNGYNLRKVPSKFQPTDSSARAYNSTFNSGGYTGC--- 331

Query: 225 NKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTV 284
           +  E     S+ K   +++GKKQ  +DE RR+TYK       E  +L+T + + KQL+ V
Sbjct: 332 SDWENEFPASVVKAV-LRYGKKQFAVDETRRDTYKNPVTLGNERPMLSTVEDEFKQLLAV 390

Query: 285 GLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLS 344
           G+H +H Y RSLA FAANLGPV WKIAA +I   LPAG  FGPGWV E+D + QR     
Sbjct: 391 GVHMKHSYARSLAHFAANLGPVVWKIAASKIRGVLPAGHEFGPGWVSEDDGSSQR----- 445

Query: 345 SATVGLPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPGPSTQSSLDGHF 404
                                   H  +  +G + ++ P  ED   +            F
Sbjct: 446 -----------------------QHFPVRDEG-RTSDHPVPEDYRSR------------F 469

Query: 405 KKPNTSSLLVVNRFSEPAKEKAEIIEGLKSQLNLVNSSMGAINTRPPFQIHQNSVIRPGM 464
             P + S  + NR    + + A  I   ++ LN V +  G   +  P +I Q S++    
Sbjct: 470 SSP-SGSFPLANRSGLQSGDMA--INNYQNDLNPVINIPGGSESITPMRIQQESMVHSDD 526

Query: 465 NGFNGTYGFNMPSQMGKLIGAAGPAGFSFQ--SPQMVD-------RISRTDTNFVQPVTA 515
            G +   G N PSQM K++  A   G S    +PQM D        I+ T+   V P   
Sbjct: 527 FGSHDRLGSNFPSQM-KMVRLADLTGSSSAGVAPQMFDMDPPISNHIAHTN---VCPSLK 582

Query: 516 SSLNSDDPKLDCSRSLQ---NLESLGSAPSLPGNHQPTWQVSPHPKPDLGLTPQQKPDAV 572
               S   +LD    L      E    +  L G  + +WQ S  P        +Q   A+
Sbjct: 583 GQYLSKSSQLDSGNLLAREPGFEQRSWSQGLAG--KSSWQGSEVPT-------KQNSFAL 633

Query: 573 PPDLNVRFRSPGSPNSSRVDST--QPDLALQL 602
             D+N    +  S NS+    +  QP+LALQL
Sbjct: 634 ANDINGEIGTTNSSNSNVEAGSQLQPNLALQL 665


>gi|51969764|dbj|BAD43574.1| hypothetical protein [Arabidopsis thaliana]
 gi|62318931|dbj|BAD94020.1| hypothetical protein [Arabidopsis thaliana]
          Length = 623

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 151/328 (46%), Positives = 201/328 (61%), Gaps = 60/328 (18%)

Query: 39  RLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFL 98
           RL +  +Y   S     +DPEELPDY E+I++PMDF T+RNKL +GAY+TLEQFE+DVFL
Sbjct: 157 RLQKKDTYGVYSD---PVDPEELPDYFEIIKNPMDFSTLRNKLDSGAYSTLEQFERDVFL 213

Query: 99  ICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPET--------KVVRRGRP 150
           IC+NAM+YN+ DT+Y+RQAR+I ELAKK+FENLRQDSDD EP++        KV RRGRP
Sbjct: 214 ICTNAMEYNSADTVYYRQARAIQELAKKDFENLRQDSDDEEPQSQQQQQQQPKVARRGRP 273

Query: 151 PTKNFKKPLGRPSLERARSDFSSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRF 210
           P K+ +      S++R  S+ S+D  +                           DSS +F
Sbjct: 274 PKKHPEP----SSIDRTASEISADALIPG-------------------------DSSNKF 304

Query: 211 SGSWN-----DLYTGCLAENKLERNDEVSLSKGYSM---------------KHGKKQVVL 250
           SG++N       Y    AE+ +  N       G+S+               K+G K   +
Sbjct: 305 SGAYNLRKAPPSYKFRQAESSVRINHNSETQSGWSVDWESEFPSSVVKAVNKYGMKHFNV 364

Query: 251 DENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKI 310
           D+NRR+TY     S +E SVLTT + + KQL+ VGL+ E+GY +SLAR+AANLGPVAWKI
Sbjct: 365 DDNRRDTYNHLSTSTQEPSVLTTLEDELKQLIPVGLNMEYGYAKSLARYAANLGPVAWKI 424

Query: 311 AARRIERCLPAGVRFGPGWVVENDLAPQ 338
           A+RRIE  LP+G++FG GWV EN   P+
Sbjct: 425 ASRRIETVLPSGIKFGQGWVGENPAGPE 452


>gi|15218005|ref|NP_173490.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
 gi|8886949|gb|AAF80635.1|AC069251_28 F2D10.15 [Arabidopsis thaliana]
 gi|209529785|gb|ACI49787.1| At1g20670 [Arabidopsis thaliana]
 gi|332191881|gb|AEE30002.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
          Length = 652

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 147/311 (47%), Positives = 195/311 (62%), Gaps = 57/311 (18%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY E+I++PMDF T+RNKL +GAY+TLEQFE+DVFLIC+NAM+YN+ DT+Y+R
Sbjct: 200 VDPEELPDYFEIIKNPMDFSTLRNKLDSGAYSTLEQFERDVFLICTNAMEYNSADTVYYR 259

Query: 116 QARSIHELAKKNFENLRQDSDDNEPET--------KVVRRGRPPTKNFKKPLGRPSLERA 167
           QAR+I ELAKK+FENLRQDSDD EP++        KV RRGRPP K+ +      S++R 
Sbjct: 260 QARAIQELAKKDFENLRQDSDDEEPQSQQQQQQQPKVARRGRPPKKHPEP----SSIDRT 315

Query: 168 RSDFSSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWN-----DLYTGCL 222
            S+ S+D  +                           DSS +FSG++N       Y    
Sbjct: 316 ASEISADALIPG-------------------------DSSNKFSGAYNLRKAPPSYKFRQ 350

Query: 223 AENKLERNDEVSLSKGYSM---------------KHGKKQVVLDENRRNTYKQFHQSLRE 267
           AE+ +  N       G+S+               K+G K   +D+NRR+TY     S +E
Sbjct: 351 AESSVRINHNSETQSGWSVDWESEFPSSVVKAVNKYGMKHFNVDDNRRDTYNHLSTSTQE 410

Query: 268 SSVLTTFDADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGP 327
            SVLTT + + KQL+ VGL+ E+GY +SLAR+AANLGPVAWKIA+RRIE  LP+G++FG 
Sbjct: 411 PSVLTTLEDELKQLIPVGLNMEYGYAKSLARYAANLGPVAWKIASRRIETVLPSGIKFGQ 470

Query: 328 GWVVENDLAPQ 338
           GWV EN   P+
Sbjct: 471 GWVGENPAGPE 481


>gi|297850490|ref|XP_002893126.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338968|gb|EFH69385.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 641

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 151/325 (46%), Positives = 198/325 (60%), Gaps = 63/325 (19%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY E+I +PMDF T+R KL +GAYATLEQFE+DVFLIC+NAM+YN+ DT+Y+R
Sbjct: 192 VDPEELPDYHEIITNPMDFSTLRKKLDSGAYATLEQFERDVFLICTNAMEYNSADTVYYR 251

Query: 116 QARSIHELAKKNFENLRQDSDDNEPET--------KVVRRGRPPTKNFKKPLGRPSLERA 167
           QAR+I ELAKK+FENLRQDSDD EP++        KV RRGRPP    KK     S++R 
Sbjct: 252 QARAIQELAKKDFENLRQDSDDEEPQSQQQQQQQPKVARRGRPP----KKQPEPSSIDRT 307

Query: 168 RSDFSSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWN-----DLYTGCL 222
            S+ S+D  +                           DSS +FSG++N       Y    
Sbjct: 308 ASEISADALIPG-------------------------DSSNKFSGAYNLRKAPPSYKFRQ 342

Query: 223 AENKLERNDEVSLSKGYSM---------------KHGKKQVVLDENRRNTYKQFHQSLRE 267
           AE+ +  N       G+S+               K+G K   +D+NRR+TY     S +E
Sbjct: 343 AESSVRINHNSETQSGWSVDWENEFPSSVVKAVNKYGMKHFNVDDNRRDTYNHLSTSTQE 402

Query: 268 SSVLTTFDADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGP 327
            SVLTT + + KQL+ VGL+ E+GY +SLAR+AAN+GPVAWKIA+RRIE  LP+G++FG 
Sbjct: 403 PSVLTTLEDELKQLIPVGLNMEYGYAKSLARYAANIGPVAWKIASRRIETVLPSGIKFGQ 462

Query: 328 GWVVENDLAPQ------RPLLLSSA 346
           GWV EN   P+      + LL+SS 
Sbjct: 463 GWVGENPAGPEEDDSQKQNLLMSSG 487


>gi|255578078|ref|XP_002529909.1| bromodomain-containing protein [Ricinus communis]
 gi|223530586|gb|EEF32463.1| bromodomain-containing protein [Ricinus communis]
          Length = 933

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 145/309 (46%), Positives = 186/309 (60%), Gaps = 33/309 (10%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D EELPDY +VI+HPMDF TVR KL NG+Y+TLEQFE DVFLI SNAMQYN+P+TIY +
Sbjct: 231 VDLEELPDYLDVIDHPMDFATVRKKLGNGSYSTLEQFESDVFLISSNAMQYNSPETIYHK 290

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRP--------------------PTKNF 155
           QAR+I ELA+K F+ LR D + +E E K   + +P                      K  
Sbjct: 291 QARAIQELARKKFQKLRIDIERSEKELKSEMKTKPNFLGSEKELKSEQKTKPNFLAKKQM 350

Query: 156 KKPLGRPSLERARSDFSSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWN 215
           KKP+ R   E   SDFSS  TLA+          D+ NG    + SG  D      G   
Sbjct: 351 KKPMSRAVQEPIGSDFSSGATLATAG--------DIQNGFVATQASG-CDRPTNVDGPVE 401

Query: 216 DLYTGCLAENKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQS-LRESSVLTTF 274
                 L +N L+R +E+S  KG   K G+K  VLD+NRR TY   +Q  +R  S  TTF
Sbjct: 402 G--NSSLIDNNLDRAEELSSGKGLLSKFGRKSSVLDDNRRATYNISNQPVVRSESTFTTF 459

Query: 275 DADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVEND 334
           + + KQL+ VGLH+E+ Y RS+ARFAA LGPVAWK+A++RIE+ LP G +FG GWV E +
Sbjct: 460 EGEIKQLVAVGLHAEYSYARSMARFAATLGPVAWKVASQRIEKALPPGFKFGRGWVGEYE 519

Query: 335 LAPQRPLLL 343
             P  P+L+
Sbjct: 520 PLP-TPVLM 527



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 8/49 (16%)

Query: 562 GLTP----QQKPDAVPPDLNVRFRSPGSP----NSSRVDSTQPDLALQL 602
           GL+P    +QK + +PPDLN+ F+SPGSP    +   VDS QPDLALQL
Sbjct: 885 GLSPHSQQKQKQETLPPDLNIGFQSPGSPVKQSSGVMVDSQQPDLALQL 933


>gi|30699162|ref|NP_177764.2| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
 gi|26449633|dbj|BAC41941.1| unknown protein [Arabidopsis thaliana]
 gi|332197709|gb|AEE35830.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
          Length = 579

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 147/300 (49%), Positives = 200/300 (66%), Gaps = 23/300 (7%)

Query: 57  DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQ 116
           DPEELPDY E+I++PMDF T+R KL +GAY TLEQFE+DVFLIC+NAM+YN+ DT+Y+RQ
Sbjct: 170 DPEELPDYYEIIKNPMDFTTLRKKLESGAYTTLEQFEQDVFLICTNAMEYNSADTVYYRQ 229

Query: 117 ARSIHELAKKNFENLRQDSDDNEP-----ETKVVRRGRPPTKNFKKPLGRPSLERARSDF 171
           AR++ ELAKK+F NLRQ+SD  EP     + KVV+RGRPP    KK L +  ++R  SD 
Sbjct: 230 ARAMLELAKKDFGNLRQESDGEEPVSLSQQPKVVKRGRPPGSGLKKQLEQSLIDRTTSDI 289

Query: 172 SSDVTLASGAENTALTNRDLGNGTPHLEKS----GF--TDSSRRFSGSWNDLYTGCLAEN 225
           S+D    + A +++       +G+ +L K+    GF   ++S R + +  +  +G L + 
Sbjct: 290 SADAAAFTYAGDSSRL-----SGSYNLRKNPPSYGFRHAETSVRINHNSEN-QSGLLID- 342

Query: 226 KLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVG 285
             E+    S+ K  + K+G K V  DENRR+TY Q   SL++SS+ T  D + KQL  VG
Sbjct: 343 -WEKEFPPSVVKAVN-KYGMKNV--DENRRDTYNQNSASLQDSSIFTLLDDNLKQLTPVG 398

Query: 286 LHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVEN-DLAPQRPLLLS 344
           L +E+GY RSLAR+AAN+GPVAW  A  RIE+ LP G  FGPGWV EN +  PQ+  L+S
Sbjct: 399 LKAEYGYARSLARYAANIGPVAWTFANVRIEKLLPTGTEFGPGWVGENPENPPQQQNLMS 458


>gi|42572125|ref|NP_974153.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
 gi|133778890|gb|ABO38785.1| At1g76380 [Arabidopsis thaliana]
 gi|332197711|gb|AEE35832.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
          Length = 580

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 147/300 (49%), Positives = 200/300 (66%), Gaps = 23/300 (7%)

Query: 57  DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQ 116
           DPEELPDY E+I++PMDF T+R KL +GAY TLEQFE+DVFLIC+NAM+YN+ DT+Y+RQ
Sbjct: 171 DPEELPDYYEIIKNPMDFTTLRKKLESGAYTTLEQFEQDVFLICTNAMEYNSADTVYYRQ 230

Query: 117 ARSIHELAKKNFENLRQDSDDNEP-----ETKVVRRGRPPTKNFKKPLGRPSLERARSDF 171
           AR++ ELAKK+F NLRQ+SD  EP     + KVV+RGRPP    KK L +  ++R  SD 
Sbjct: 231 ARAMLELAKKDFGNLRQESDGEEPVSLSQQPKVVKRGRPPGSGLKKQLEQSLIDRTTSDI 290

Query: 172 SSDVTLASGAENTALTNRDLGNGTPHLEKS----GF--TDSSRRFSGSWNDLYTGCLAEN 225
           S+D    + A +++       +G+ +L K+    GF   ++S R + +  +  +G L + 
Sbjct: 291 SADAAAFTYAGDSSRL-----SGSYNLRKNPPSYGFRHAETSVRINHNSEN-QSGLLID- 343

Query: 226 KLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVG 285
             E+    S+ K  + K+G K V  DENRR+TY Q   SL++SS+ T  D + KQL  VG
Sbjct: 344 -WEKEFPPSVVKAVN-KYGMKNV--DENRRDTYNQNSASLQDSSIFTLLDDNLKQLTPVG 399

Query: 286 LHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVEN-DLAPQRPLLLS 344
           L +E+GY RSLAR+AAN+GPVAW  A  RIE+ LP G  FGPGWV EN +  PQ+  L+S
Sbjct: 400 LKAEYGYARSLARYAANIGPVAWTFANVRIEKLLPTGTEFGPGWVGENPENPPQQQNLMS 459


>gi|356569782|ref|XP_003553075.1| PREDICTED: uncharacterized protein LOC100792844 [Glycine max]
          Length = 833

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 155/328 (47%), Positives = 195/328 (59%), Gaps = 26/328 (7%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D EELPDY +VIEHPMDF TVR KL NG+Y TLEQFE DVFLICSNAMQYNAP+TIY +
Sbjct: 160 VDLEELPDYLDVIEHPMDFATVRKKLGNGSYTTLEQFESDVFLICSNAMQYNAPETIYHK 219

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRP---PTKNFKKPLGRPSLERARSDFS 172
           QARSI EL +K FE LR   + ++ E K   +        K  KKPL R S E   SDFS
Sbjct: 220 QARSIQELGRKKFEKLRIGFERSQIELKSEEKAGSNYLVKKQPKKPLARASQEPVGSDFS 279

Query: 173 SDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDE 232
           S  TLA+ A+    ++  L  G    E+SG  D     +  W D           ER D+
Sbjct: 280 SGATLATIADVQPTSH--LMQGGSRCERSGNIDGILEANAFWIDA--------NQERADD 329

Query: 233 VSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSL-RESSVLTTFDADKKQLMTVGLHSEHG 291
           V   KG   K G+K  VLDE+RR +Y   +Q + R  S+  TF++  K L+TVGL +E+ 
Sbjct: 330 VLSGKGLLSKWGRKSSVLDESRRASYNMSNQPIVRSDSIFMTFESKMKHLVTVGLDAEYS 389

Query: 292 YTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLSSATVGLP 351
           Y RSLARF A+LGP+AWKIA+ RI+  LPAG +FG GWV E +  P  P+L+ +  V   
Sbjct: 390 YARSLARFGASLGPIAWKIASHRIQNALPAGCKFGRGWVGEYEPLPT-PILMVNNRVQKE 448

Query: 352 SSSQPSLIPENLSSASTHSTIEL-KGDK 378
           +S    L          HST EL KG++
Sbjct: 449 TSLDMKL----------HSTTELPKGNQ 466



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 11/60 (18%)

Query: 548 QPTWQ-VSPHPKPDLGLTPQQKPDAVPPDLNVRFRSPGSP----NSSRVDSTQPDLALQL 602
           Q  W+ +SPH +       +QK + +PPDLN+ F SPGSP    +   VDS QPDLALQL
Sbjct: 780 QSPWRGISPHSQS------RQKQETLPPDLNIDFESPGSPVKQSSGVLVDSQQPDLALQL 833


>gi|359494049|ref|XP_002277977.2| PREDICTED: uncharacterized protein LOC100267501 [Vitis vinifera]
          Length = 898

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 154/360 (42%), Positives = 208/360 (57%), Gaps = 38/360 (10%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY +VIEHPMDF TVR KL NG+Y T E+FE DVFLIC+NAMQYNAPDTIY +
Sbjct: 196 VDPEELPDYHDVIEHPMDFATVRKKLGNGSYRTFEEFESDVFLICTNAMQYNAPDTIYHK 255

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVR----------------RGRPPT-KNFKKP 158
           QAR+I ELA+K F+ LR D   +E E K  +                R  P   K  KKP
Sbjct: 256 QARAIQELARKKFQKLRIDIGRSEKELKSEQLKPERSEKDLKSEQKMRSNPLVKKQIKKP 315

Query: 159 LGRPSLERARSDFSSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLY 218
           + R + E   SDFSS  TLA        T  D+ NG  +  ++G  +      G   +  
Sbjct: 316 IFRTAQEPVGSDFSSGATLA--------TMGDVQNGF-NATQAGGCERPSNVDGLIIESN 366

Query: 219 TGCLAENKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRES-SVLTTFDAD 277
              + +N LE+ +E+   KG   K G+K  V+DENRR TY   +Q +  S ++  TF+A+
Sbjct: 367 PSQI-DNNLEKAEELFSGKGLLSKFGRKPFVVDENRRATYSISNQPIVGSETIFNTFEAE 425

Query: 278 KKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAP 337
            KQL+ VGLH++H Y RSLARFAA LGPVAWK+A++RIE+ LP G +FG GWV E +  P
Sbjct: 426 AKQLVAVGLHADHSYARSLARFAATLGPVAWKVASQRIEQALPVGSKFGRGWVGEFEPLP 485

Query: 338 QRPLLLSSATVGLPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPGPSTQ 397
              L+L +         +P L+P+       H+ +  K +K+++ P         GP+ +
Sbjct: 486 TPVLMLETRI-----QKEPFLVPK-----LQHNAVLRKDEKISKPPVPAKEHSVSGPTLE 535



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 8/49 (16%)

Query: 562 GLTPQQKP----DAVPPDLNVRFRSPGSP----NSSRVDSTQPDLALQL 602
           GL P  +P    + +PPDLN+ F+  GSP    +   VDS QPDLALQL
Sbjct: 850 GLNPNTQPRHRQETLPPDLNIGFQPSGSPVRQSSGVLVDSQQPDLALQL 898


>gi|6554481|gb|AAF16663.1|AC012394_12 hypothetical protein; 50925-54045 [Arabidopsis thaliana]
          Length = 556

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 146/300 (48%), Positives = 186/300 (62%), Gaps = 47/300 (15%)

Query: 57  DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFE---KDVFLICSNAMQYNAPDTIY 113
           DPEELPDY E+I++PMDF T+R KL +GAY TLEQFE   +DVFLIC+NAM+YN+ DT+Y
Sbjct: 171 DPEELPDYYEIIKNPMDFTTLRKKLESGAYTTLEQFEASLQDVFLICTNAMEYNSADTVY 230

Query: 114 FRQARSIHELAKKNFENLRQDSDDNEP-----ETKVVRRGRPPTKNFKKPLGRPSLERAR 168
           +RQAR++ ELAKK+F NLRQ+SD  EP     + KVV+RGRPP    KK L +  ++R  
Sbjct: 231 YRQARAMLELAKKDFGNLRQESDGEEPVSLSQQPKVVKRGRPPGSGLKKQLEQSLIDRTT 290

Query: 169 SDFSSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLE 228
           SD S+D          A T               +   S R SGS+N      L +N   
Sbjct: 291 SDISADAA--------AFT---------------YAGDSSRLSGSYN------LRKNPPS 321

Query: 229 ---RNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVG 285
              R+ E S    Y MK+      +DENRR+TY Q   SL++SS+ T  D + KQL  VG
Sbjct: 322 YGFRHAETSAVNKYGMKN------VDENRRDTYNQNSASLQDSSIFTLLDDNLKQLTPVG 375

Query: 286 LHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVEN-DLAPQRPLLLS 344
           L +E+GY RSLAR+AAN+GPVAW  A  RIE+ LP G  FGPGWV EN +  PQ+  L+S
Sbjct: 376 LKAEYGYARSLARYAANIGPVAWTFANVRIEKLLPTGTEFGPGWVGENPENPPQQQNLMS 435


>gi|186532180|ref|NP_200315.2| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
 gi|186532184|ref|NP_001119438.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
 gi|18377658|gb|AAL66979.1| unknown protein [Arabidopsis thaliana]
 gi|20465577|gb|AAM20271.1| unknown protein [Arabidopsis thaliana]
 gi|332009188|gb|AED96571.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
 gi|332009189|gb|AED96572.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
          Length = 916

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/324 (45%), Positives = 196/324 (60%), Gaps = 19/324 (5%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY ++IEHPMDF TVR KLANG+Y+TLE+ E DV LICSNAMQYN+ DT+Y++
Sbjct: 211 VDPEELPDYHDMIEHPMDFSTVRKKLANGSYSTLEELESDVLLICSNAMQYNSSDTVYYK 270

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPT---KNFKKPLGRPSLERARSDFS 172
           QAR+I E+ K+ FE  R      E E K   + +P +   K  ++P  R  LE   SDFS
Sbjct: 271 QARTIQEMGKRKFEKARLKIKRAEKELKTDEKVKPDSSVKKQVRQPFSRNGLEAVGSDFS 330

Query: 173 SDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLA-ENKLERND 231
           S   LASG    A  N  +       EK  +TD           L+ G  +  + LE+ +
Sbjct: 331 SGANLASGG---ASQNEPVSTQIGGHEKHSYTDV----------LFEGNTSLVDSLEKAE 377

Query: 232 EVSLSKGYSMKHGKKQVVLDENRRNTYKQF-HQSLRESSVLTTFDADKKQLMTVGLHSEH 290
           ++S  KG   K G+K  V++E+RR TY+    Q  R  S+ TTF+++ KQ + VGLH+EH
Sbjct: 378 DLSSGKGLFGKCGRKLSVVEEDRRATYEDSDQQGDRSESIFTTFESEIKQFVAVGLHAEH 437

Query: 291 GYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLSSATVGL 350
            Y RSLARFAA LGPVAWKIA++RIE+ LPA  +FG GWV E +  P   LL  + T   
Sbjct: 438 AYGRSLARFAATLGPVAWKIASQRIEQALPADFKFGRGWVGEYEPLPTPVLLFETCTPKE 497

Query: 351 PSSSQPSLIPENLSSASTHSTIEL 374
           P   + S+  +  S+A+T +   L
Sbjct: 498 P-PKKASVFSKRKSNAATKTNETL 520



 Score = 42.7 bits (99), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 4/48 (8%)

Query: 559 PDLGLTPQQKPDAVPPDLNVRFRSPGSP----NSSRVDSTQPDLALQL 602
           P + L  +Q+   +PPDLN+   SP SP    +  RVDS QPDLALQL
Sbjct: 869 PQVQLKQRQENFNLPPDLNIGVHSPDSPAKQSSGVRVDSQQPDLALQL 916


>gi|356524267|ref|XP_003530751.1| PREDICTED: uncharacterized protein LOC100799455 [Glycine max]
          Length = 862

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/281 (49%), Positives = 177/281 (62%), Gaps = 15/281 (5%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY +VIEHPMDF TVR  LANG+Y TLEQFE DVFLICSNAMQYNAP+TIY +
Sbjct: 190 VDPEELPDYHDVIEHPMDFATVRKNLANGSYTTLEQFESDVFLICSNAMQYNAPETIYHK 249

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRP---PTKNFKKPLGRPSLERARSDFS 172
           QARSI EL +K FE LR   + ++ E K  ++        K  KKPL R S E   SDFS
Sbjct: 250 QARSIQELGRKKFEKLRIGFEHSQIELKSEQKAGSNYLVKKQPKKPLARASQEPVGSDFS 309

Query: 173 SDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDE 232
           S  TLA+ A+    ++   G      E+SG  D     +  W D           E+ ++
Sbjct: 310 SGATLATIADVQPTSHLMQGG---RCERSGNLDGILEANAFWIDA--------NQEKAED 358

Query: 233 VSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSL-RESSVLTTFDADKKQLMTVGLHSEHG 291
           V L KG   K G+K   LDE+RR +Y   +Q + +  S+  TF+   K L+TVGLH+E+ 
Sbjct: 359 VLLGKGLLSKWGRKSFALDESRRASYNMSNQPIVKPDSIFMTFERGMKHLVTVGLHAEYS 418

Query: 292 YTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVE 332
           Y RSLARF+A+LGP+AWKIA+ RI+  LPAG +FG GWV E
Sbjct: 419 YARSLARFSASLGPIAWKIASHRIQHALPAGCKFGRGWVGE 459



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 11/70 (15%)

Query: 541 PSLPGNHQPTWQVSPHPKPDLGLTPQ----QKPDAVPPDLNVRFRSPGSP----NSSRVD 592
           P L    Q  +Q+ P   P  GL+P+    QK + +PPDLN+ F SPGSP    +   VD
Sbjct: 796 PQLASADQSRFQMQP---PWRGLSPRSQSRQKQETLPPDLNIDFESPGSPVKQSSGVLVD 852

Query: 593 STQPDLALQL 602
           S QPDLALQL
Sbjct: 853 SQQPDLALQL 862


>gi|218202580|gb|EEC85007.1| hypothetical protein OsI_32297 [Oryza sativa Indica Group]
          Length = 587

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 175/437 (40%), Positives = 242/437 (55%), Gaps = 54/437 (12%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           ELPDY ++I+HPMDF T+R KL  GAY  LEQFE DVFL+ SNAM YN+PDTIY+RQAR+
Sbjct: 166 ELPDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDVFLLTSNAMCYNSPDTIYYRQARA 225

Query: 120 IHELAKKNFENLRQDSDDNEPETKVV-----------RRGRPPTKN-FKKPLGRPSLERA 167
           I ELAKK+FENLRQDSD +EPE ++            RRGRPP KN  K+ +G+P +ERA
Sbjct: 226 IQELAKKDFENLRQDSDASEPEPELEIKPDPEPKPQPRRGRPPNKNTIKQKVGKPPVERA 285

Query: 168 RSDFSSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKL 227
            +DFS   TLAS   +   T          +  S   D  R    S N+ Y     E KL
Sbjct: 286 TADFSG-ATLASVGNSGHRTQPPFDLQRQVMNGSFIADVLRASFASRNNGYNWS-NERKL 343

Query: 228 ERNDEVSLSKG-YSMKHGKKQVVLDENRRNTYKQFH--QSLRESSVLTTFDADKKQLMTV 284
           ER ++ S S G +S K G+K ++ +E+ R+TY Q     S+ E  V ++++  +K L+ V
Sbjct: 344 ERIEDYSGSMGKWSAKSGRKPILTEESSRSTYCQPQPSSSIYELPVSSSYNETRKLLVPV 403

Query: 285 GLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDL--APQRPLL 342
           G+  +  Y RSLARFAA LGPVAW+IA++RIER LP G +FG GWV + +   A Q P+L
Sbjct: 404 GVQLQQSYPRSLARFAAQLGPVAWEIASKRIERALPPGTKFGRGWVGDGEAPNATQPPVL 463

Query: 343 LSSATVGL-PSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPGPSTQSSLD 401
            +S+T  + PSS++ S      S   TH+            P +   S  P PS+     
Sbjct: 464 TTSSTALIHPSSTETS------SEQPTHNG-----------PPSSSHSAGPQPSS----- 501

Query: 402 GHFKKPNTSSLLVVNRF---SEPAKEKAEIIEGLKSQLNLVNSSMGAINTRPPFQIHQNS 458
                P  SS +  +R    S P+++   +      Q++      GA        +H+  
Sbjct: 502 ----APYASSTVTTHRVNCQSLPSQQHGSV-----PQVSAERGEHGAEVKGNHNNLHERP 552

Query: 459 VIRPGMNGFNGTYGFNM 475
            I+  +NGF+   G N+
Sbjct: 553 AIQHTVNGFSAVSGSNI 569


>gi|356524269|ref|XP_003530752.1| PREDICTED: uncharacterized protein LOC100799986 [Glycine max]
          Length = 793

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 151/328 (46%), Positives = 198/328 (60%), Gaps = 27/328 (8%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY +VIEHPMDF TVR KL NG+Y TLEQFE DVFLICSNAMQYNAP+TIY +
Sbjct: 128 VDPEELPDYHDVIEHPMDFATVRKKLGNGSYTTLEQFETDVFLICSNAMQYNAPETIYHK 187

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRP---PTKNFKKPLGRPSLERARSDFS 172
           QARSI EL +K FE LR   + ++ E K  ++        K  KKPL R S E   SDFS
Sbjct: 188 QARSIQELGRKKFEKLRIGFERSQNELKSEQKAGSNYLVKKQPKKPLARASQEPVGSDFS 247

Query: 173 SDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDE 232
           S  TLA+ A+    ++   G      E+SG  D     +  W D           E++++
Sbjct: 248 SGATLATIADVQPTSHLMQGG---RCERSGNLDGILEANAFWIDA--------NQEKSED 296

Query: 233 VSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSL-RESSVLTTFDADKKQLMTVGLHSEHG 291
           V   KG   K G+K   LDE+RR +Y   +Q + R  S+  TF+++ K L+TVGL +E+ 
Sbjct: 297 VLSGKGLLSKWGRKSFALDESRRASYNMSNQPIVRSDSIFMTFESEMKHLVTVGLQAEYS 356

Query: 292 YTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLSSATVGLP 351
           Y RSLARF+A+LGP+AWKIA+ RI+  LP G +FG GWV E +  P  P+L+ +  V   
Sbjct: 357 YARSLARFSASLGPIAWKIASHRIQHALPTGCKFGRGWVGEYEPLPT-PILMVNNRV--- 412

Query: 352 SSSQPSLIPENLSSASTHSTIEL-KGDK 378
              + SL+         HST EL KG++
Sbjct: 413 -QKETSLV------MKLHSTTELPKGNQ 433



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 40/70 (57%), Gaps = 11/70 (15%)

Query: 541 PSLPGNHQPTWQVSPHPKPDLGLTP----QQKPDAVPPDLNVRFRSPGSPNSSR----VD 592
           P L    Q  +Q+ P   P  GL+P    +QK + +PPDLN+ F SPGSP        VD
Sbjct: 727 PQLASADQSRFQMQP---PWGGLSPHSQSRQKQETLPPDLNIDFESPGSPVKQSPGVLVD 783

Query: 593 STQPDLALQL 602
           S QPDLALQL
Sbjct: 784 SQQPDLALQL 793


>gi|115480537|ref|NP_001063862.1| Os09g0550000 [Oryza sativa Japonica Group]
 gi|50725131|dbj|BAD33748.1| unknown protein [Oryza sativa Japonica Group]
 gi|50726301|dbj|BAD33876.1| unknown protein [Oryza sativa Japonica Group]
 gi|113632095|dbj|BAF25776.1| Os09g0550000 [Oryza sativa Japonica Group]
 gi|215695365|dbj|BAG90556.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215767367|dbj|BAG99595.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 567

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 181/447 (40%), Positives = 247/447 (55%), Gaps = 66/447 (14%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY ++I+HPMDF T+R KL  GAY  LEQFE DVFL+ SNAM YN+PDTIY+R
Sbjct: 142 VDPEELPDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDVFLLTSNAMCYNSPDTIYYR 201

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVV-----------RRGRPPTKN-FKKPLGRPS 163
           QAR+I ELAKK+FENLRQDSD +EPE +             RRGRPP KN  K+ +G+P 
Sbjct: 202 QARAIQELAKKDFENLRQDSDASEPEPEPEIKPDPEPKPQPRRGRPPNKNTIKQKVGKPP 261

Query: 164 LERARSDFSSDVTLASGAENTALT------NRDLGNGTPHLEKSGFTDSSRRFSGSWNDL 217
           +ERA +DFS   TLAS   N   T       R + NG      S   D  R    S N+ 
Sbjct: 262 VERATADFSG-ATLASVGNNGHRTQPPFDLQRQVMNG------SFIADVLRASFASRNNG 314

Query: 218 YTGCLAENKLERNDEVSLSKG-YSMKHGKKQVVLDENRRNTYKQFH--QSLRESSVLTTF 274
           Y     E KLER ++ S S G +S K G+K ++ +E+ R+TY Q     S+ E  V +++
Sbjct: 315 YNWS-NERKLERIEDYSGSIGKWSAKSGRKPILTEESSRSTYCQPQPSSSIYELPVSSSY 373

Query: 275 DADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVEND 334
           +  +K L+ VG+  +  Y RSLARFAA LGPVAW+IA++RIER LP G +FG GWV + +
Sbjct: 374 NETRKLLVPVGVQLQQSYPRSLARFAAQLGPVAWEIASKRIERALPPGTKFGRGWVGDGE 433

Query: 335 L--APQRPLLLSSATVGL-PSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEK 391
              A Q P+L +S+T  + PSS++ S      S   TH+                 +S  
Sbjct: 434 APNATQPPVLTTSSTALIHPSSTETS------SEQPTHNGT-------------ASTSHS 474

Query: 392 PGPSTQSSLDGHFKKPNTSSLLVVNRF---SEPAKEKAEIIEGLKSQLNLVNSSMGAINT 448
            GP   S+       P  SS +  +R    S P+++   +      Q++      GA   
Sbjct: 475 AGPQPSSA-------PYASSTITTHRVNCQSLPSQQHGSV-----PQVSAERGEHGAEVK 522

Query: 449 RPPFQIHQNSVIRPGMNGFNGTYGFNM 475
                +H+   I+  +NGF+   G N+
Sbjct: 523 GNHNNLHERPAIQHTVNGFSAVSGSNI 549


>gi|42572127|ref|NP_974154.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
 gi|332197710|gb|AEE35831.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
          Length = 579

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 146/300 (48%), Positives = 199/300 (66%), Gaps = 23/300 (7%)

Query: 57  DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQ 116
           DPEELPDY E+I++PMDF T+R KL +GAY TLEQFE +VFLIC+NAM+YN+ DT+Y+RQ
Sbjct: 170 DPEELPDYYEIIKNPMDFTTLRKKLESGAYTTLEQFEANVFLICTNAMEYNSADTVYYRQ 229

Query: 117 ARSIHELAKKNFENLRQDSDDNEP-----ETKVVRRGRPPTKNFKKPLGRPSLERARSDF 171
           AR++ ELAKK+F NLRQ+SD  EP     + KVV+RGRPP    KK L +  ++R  SD 
Sbjct: 230 ARAMLELAKKDFGNLRQESDGEEPVSLSQQPKVVKRGRPPGSGLKKQLEQSLIDRTTSDI 289

Query: 172 SSDVTLASGAENTALTNRDLGNGTPHLEKS----GF--TDSSRRFSGSWNDLYTGCLAEN 225
           S+D    + A +++       +G+ +L K+    GF   ++S R + +  +  +G L + 
Sbjct: 290 SADAAAFTYAGDSSRL-----SGSYNLRKNPPSYGFRHAETSVRINHNSEN-QSGLLID- 342

Query: 226 KLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVG 285
             E+    S+ K  + K+G K V  DENRR+TY Q   SL++SS+ T  D + KQL  VG
Sbjct: 343 -WEKEFPPSVVKAVN-KYGMKNV--DENRRDTYNQNSASLQDSSIFTLLDDNLKQLTPVG 398

Query: 286 LHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVEN-DLAPQRPLLLS 344
           L +E+GY RSLAR+AAN+GPVAW  A  RIE+ LP G  FGPGWV EN +  PQ+  L+S
Sbjct: 399 LKAEYGYARSLARYAANIGPVAWTFANVRIEKLLPTGTEFGPGWVGENPENPPQQQNLMS 458


>gi|297842395|ref|XP_002889079.1| hypothetical protein ARALYDRAFT_476793 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334920|gb|EFH65338.1| hypothetical protein ARALYDRAFT_476793 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 591

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/288 (49%), Positives = 192/288 (66%), Gaps = 25/288 (8%)

Query: 57  DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFE---KDVFLICSNAMQYNAPDTIY 113
           DPEELPDY ++I++PMDF T+R KL +GAY TLEQFE   +DVFLIC+NAM+YN+ DT+Y
Sbjct: 169 DPEELPDYYDIIKNPMDFSTLRKKLESGAYTTLEQFEASLQDVFLICTNAMEYNSADTVY 228

Query: 114 FRQARSIHELAKKNFENLRQDSDDNEP-----ETKVVRRGRPPTKNFKKPLGRPSLERAR 168
           FRQAR++ ELAKK+F NLRQ+SD  EP     + KVV+RGRPP    KK L +  ++R  
Sbjct: 229 FRQARAMLELAKKDFGNLRQESDGEEPVSLSQQPKVVKRGRPPGSGLKKQLEQSLIDRTT 288

Query: 169 SDFSSDVTLASGAENTALTNRDLGNGTPHLEKS----GF--TDSSRRFSGSWNDLYTGCL 222
           S+ S+D    + A +++  +     G+ +L K+    GF   ++S R + S  +  +G +
Sbjct: 289 SNISADAAALTYAGDSSRLS-----GSYNLRKNPPSYGFRQAETSVRINHSSEN-QSGLM 342

Query: 223 AENKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLM 282
            +   E+    S+ K    K+G K V  DENRR+TY Q   SL+ESS+ T  + D KQL 
Sbjct: 343 ID--WEKEFPPSVVKAVH-KYGMKNV--DENRRDTYDQISTSLQESSIFTMLEDDLKQLT 397

Query: 283 TVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWV 330
            VGL +E+GY RSLAR+AANLGPVAW+ A  RIE+ LP G +FGPGWV
Sbjct: 398 PVGLKTEYGYARSLARYAANLGPVAWRFANARIEKLLPTGTQFGPGWV 445



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 532 QNLESLGSAPSLPGNHQPTWQVSPHPKPDLGLTP--QQKPDAVPPDLNVRFRSPGSPNSS 589
           Q  ES G   +  G +QP  Q+        GL P  +Q+   +PPDLN R  SP SP S+
Sbjct: 517 QETESNGLVRASSGFNQPQNQMLETAVSQQGLFPNIKQEFQQLPPDLNARLVSPNSPGSN 576

Query: 590 RV--DSTQPDLALQL 602
                S  PDLALQL
Sbjct: 577 HQAGSSQHPDLALQL 591


>gi|222642038|gb|EEE70170.1| hypothetical protein OsJ_30246 [Oryza sativa Japonica Group]
          Length = 1322

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 155/326 (47%), Positives = 210/326 (64%), Gaps = 32/326 (9%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
            +DPEELPDY ++I+HPMDF T+R KL  GAY  LEQFE DVFL+ SNAM YN+PDTIY+R
Sbjct: 880  VDPEELPDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEDDVFLLTSNAMCYNSPDTIYYR 939

Query: 116  QARSIHELAKKNFENLRQDSDDNEPETKVV-----------RRGRPPTKN-FKKPLGRPS 163
            QAR+I ELAKK+FENLRQDSD +EPE +             RRGRPP KN  K+ +G+P 
Sbjct: 940  QARAIQELAKKDFENLRQDSDASEPEPEPEIKPDPEPKPQPRRGRPPNKNTIKQKVGKPP 999

Query: 164  LERARSDFSSDVTLASGAENTALT------NRDLGNGTPHLEKSGFTDSSRRFSGSWNDL 217
            +ERA +DFS   TLAS   N   T       R + NG+   +    + +SR    +W++ 
Sbjct: 1000 VERATADFSG-ATLASVGNNGHRTQPPFDLQRQVMNGSFIADVLRASFASRNNGYNWSN- 1057

Query: 218  YTGCLAENKLERNDEVSLSKG-YSMKHGKKQVVLDENRRNTYKQFH--QSLRESSVLTTF 274
                  E KLER ++ S S G +S K G+K ++ +E+ R+TY Q     S+ E  V +++
Sbjct: 1058 ------ERKLERIEDYSGSIGKWSAKSGRKPILTEESSRSTYCQPQPSSSIYELPVSSSY 1111

Query: 275  DADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVEND 334
            +  +K L+ VG+  +  Y RSLARFAA LGPVAW+IA++RIER LP G +FG GWV + +
Sbjct: 1112 NETRKLLVPVGVQLQQSYPRSLARFAAQLGPVAWEIASKRIERALPPGTKFGRGWVGDGE 1171

Query: 335  L--APQRPLLLSSATVGL-PSSSQPS 357
               A Q P+L +S+T  + PSS++ S
Sbjct: 1172 APNATQPPVLTTSSTALIHPSSTETS 1197


>gi|297796375|ref|XP_002866072.1| hypothetical protein ARALYDRAFT_495586 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311907|gb|EFH42331.1| hypothetical protein ARALYDRAFT_495586 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 915

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 143/300 (47%), Positives = 185/300 (61%), Gaps = 16/300 (5%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY E+IEHPMDF TVR KLA+G+Y+TLE+ E DV LICSNAMQYN+ DT+Y++
Sbjct: 210 VDPEELPDYHEMIEHPMDFSTVRKKLAHGSYSTLEELESDVLLICSNAMQYNSSDTVYYK 269

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKV---VRRGRPPTKNFKKPLGRPSLERARSDFS 172
           QAR+I E+ K+ F+  R      E E K    V+ G    K  ++P  R  LE   SDFS
Sbjct: 270 QARTIQEMGKRKFDKARIKIKRAEKELKTDEKVKPGSSVKKQVRQPFSRNGLEPVGSDFS 329

Query: 173 SDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDE 232
               LASG    A  N  +   T   EK   TD    F G+        L +N LE+ ++
Sbjct: 330 FGANLASGG---ASQNEPVLTQTGGHEKHSCTDVF--FEGN------ASLVDN-LEKAED 377

Query: 233 VSLSKGYSMKHGKKQVVLDENRRNTYKQF-HQSLRESSVLTTFDADKKQLMTVGLHSEHG 291
           +S  KG   K G+K  V++E+RR TY+    Q+ R  S+ TTF+++ KQ + VGLH+EH 
Sbjct: 378 LSSGKGLVGKCGRKLSVVEEDRRATYENSDQQADRSESIFTTFESEIKQFVAVGLHAEHA 437

Query: 292 YTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLSSATVGLP 351
           Y RSLARFAA LGPVAWKIA++RIE+ LPA  +FG GWV E +  P   LL  + T   P
Sbjct: 438 YGRSLARFAATLGPVAWKIASQRIEQALPADFKFGRGWVGEYEPLPTPVLLFETYTPKEP 497



 Score = 42.4 bits (98), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 4/48 (8%)

Query: 559 PDLGLTPQQKPDAVPPDLNVRFRSPGSP----NSSRVDSTQPDLALQL 602
           P + L  +Q+   +PPDLN+   SP SP    +  RVDS QPDLALQL
Sbjct: 868 PQVQLKQRQENLNLPPDLNIGVHSPDSPAKQSSGVRVDSQQPDLALQL 915


>gi|449517595|ref|XP_004165831.1| PREDICTED: uncharacterized protein LOC101229993 [Cucumis sativus]
          Length = 881

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 164/399 (41%), Positives = 222/399 (55%), Gaps = 53/399 (13%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY +VI+HPMDF TVRNKLANG+Y+TLEQFE DVFLICSNAMQYN+P+TIY +
Sbjct: 208 VDPEELPDYHDVIDHPMDFATVRNKLANGSYSTLEQFESDVFLICSNAMQYNSPETIYHK 267

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVR--------RGRPPTKNFKKPLGRPSLERA 167
           QARSI ELAKK FE +R + + +E E K+ +        + +PP    KKP  R   E  
Sbjct: 268 QARSIQELAKKKFERVRNEVERSEKELKLEQSAKSNSYVKKQPP----KKPFFRTLQEPI 323

Query: 168 RSDFSSDVTLAS--GAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAEN 225
            SDFSS  TLA+    +N++   + +    P         SS  F  +  D         
Sbjct: 324 GSDFSSGATLAATGDVQNSSNPIQAVNYEVPSNIDGQVEGSSSLFDTTIQD--------- 374

Query: 226 KLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYK-QFHQSLRESSVLTTFDADKKQLMTV 284
              + +E+   +G   K G+K  VLD+NRR TY      + R  S+ +TF+ + +Q + V
Sbjct: 375 ---KAEELFSGRGLLGKLGRKSSVLDDNRRATYNLSISPAPRSESIFSTFEDEIRQFVAV 431

Query: 285 GLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLS 344
           GLH+E+ Y RSLARFAA LGP+AWK+A++RIE+ +P G +FG GWV E +  P   L+  
Sbjct: 432 GLHAEYSYARSLARFAATLGPIAWKVASQRIEQAVPVGCKFGRGWVGEYEPLPTPVLIFE 491

Query: 345 SATVGLPSSSQPSLIPENLSSASTHSTIELKGD-KLTERPEAEDSSEKPGPSTQ------ 397
           +     P       +  NL     HST  L+ D K ++ P  +       PST+      
Sbjct: 492 NQNQKEPG------LNNNL-----HSTSALRKDAKPSDTPLPKQEHSLSAPSTEVSGIAR 540

Query: 398 -SSLDGH--FKK---PNTSSL--LVVNRFSEPAKEKAEI 428
            S+LDG   F K   PN   L  L    F+E  K K ++
Sbjct: 541 GSTLDGKSSFLKSSTPNPGPLQNLQTKHFTEVEKVKKQV 579



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 11/60 (18%)

Query: 548 QPTWQ-VSPHPKPDLGLTPQQKPDAVPPDLNVRFRSPGSP----NSSRVDSTQPDLALQL 602
           Q TW+ +SPH +P      ++K + +PPDLN+ F+SPGSP    +S  VDS QPDLALQL
Sbjct: 828 QSTWRALSPHNQP------RKKQEMLPPDLNIGFQSPGSPVKQSSSVLVDSQQPDLALQL 881


>gi|449444206|ref|XP_004139866.1| PREDICTED: uncharacterized protein LOC101204699 [Cucumis sativus]
          Length = 903

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 164/399 (41%), Positives = 222/399 (55%), Gaps = 53/399 (13%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY +VI+HPMDF TVRNKLANG+Y+TLEQFE DVFLICSNAMQYN+P+TIY +
Sbjct: 230 VDPEELPDYHDVIDHPMDFATVRNKLANGSYSTLEQFESDVFLICSNAMQYNSPETIYHK 289

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVR--------RGRPPTKNFKKPLGRPSLERA 167
           QARSI ELAKK FE +R + + +E E K+ +        + +PP    KKP  R   E  
Sbjct: 290 QARSIQELAKKKFERVRNEVERSEKELKLEQSAKSNSYIKKQPP----KKPFFRTLQEPI 345

Query: 168 RSDFSSDVTLAS--GAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAEN 225
            SDFSS  TLA+    +N++   + +    P         SS  F  +  D         
Sbjct: 346 GSDFSSGATLAATGDVQNSSNPIQAVNYEVPSNIDGQVEGSSSLFDTTVQD--------- 396

Query: 226 KLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYK-QFHQSLRESSVLTTFDADKKQLMTV 284
              + +E+   +G   K G+K  VLD+NRR TY      + R  S+ +TF+ + +Q + V
Sbjct: 397 ---KAEELFSGRGLLGKLGRKSSVLDDNRRATYNLSISPAPRSESIFSTFEDEIRQFVAV 453

Query: 285 GLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLS 344
           GLH+E+ Y RSLARFAA LGP+AWK+A++RIE+ +P G +FG GWV E +  P   L+  
Sbjct: 454 GLHAEYSYARSLARFAATLGPIAWKVASQRIEQAVPVGCKFGRGWVGEYEPLPTPVLIFE 513

Query: 345 SATVGLPSSSQPSLIPENLSSASTHSTIELKGD-KLTERPEAEDSSEKPGPSTQ------ 397
           +     P       +  NL     HST  L+ D K ++ P  +       PST+      
Sbjct: 514 NQNQKEPG------LNNNL-----HSTSALRKDAKPSDTPLPKQEHSLSAPSTEVSGIAR 562

Query: 398 -SSLDGH--FKK---PNTSSL--LVVNRFSEPAKEKAEI 428
            S+LDG   F K   PN   L  L    F+E  K K ++
Sbjct: 563 GSTLDGKSSFLKSSTPNPGPLQNLQTKHFTEVEKVKKQV 601



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 11/60 (18%)

Query: 548 QPTWQ-VSPHPKPDLGLTPQQKPDAVPPDLNVRFRSPGSP----NSSRVDSTQPDLALQL 602
           Q TW+ +SPH +P      ++K + +PPDLN+ F+SPGSP    +S  VDS QPDLALQL
Sbjct: 850 QSTWRALSPHNQP------RKKQEMLPPDLNIGFQSPGSPVKQSSSVLVDSQQPDLALQL 903


>gi|226506504|ref|NP_001147828.1| LOC100281438 [Zea mays]
 gi|195613986|gb|ACG28823.1| DNA binding protein [Zea mays]
          Length = 585

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/304 (45%), Positives = 194/304 (63%), Gaps = 35/304 (11%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY ++++HPMDF T+R KL  GAY+ LEQFE DVFLI +NAM YN+PDTIY+R
Sbjct: 149 VDPEELPDYHDIVKHPMDFSTIRKKLDKGAYSNLEQFEDDVFLISTNAMCYNSPDTIYYR 208

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVV--------------RRGRPPTK-NFKKPLG 160
           QAR I E+AKK+FENLRQDSD ++PE +                RRGRPP K N K+ +G
Sbjct: 209 QARGIQEIAKKDFENLRQDSDASDPEPEPELELEPEPEEPKLQPRRGRPPNKNNAKQKVG 268

Query: 161 RPSLERARSDFSSDVTLASGAE-------NTALTNRDLGNGTPHLEKSGFTDSSRRFSGS 213
           +P  ERA +DFS   TLA+ A        +  L+ R +      + ++ F  ++RR   +
Sbjct: 269 KPPTERATADFSG-ATLATAANIGRHAQADVDLSRRAMDKAMMDMLRASF--ANRRNEHN 325

Query: 214 WNDLYTGCLAENKLERNDEVSLSKG-YSMKHGKKQVVLDENRRNTY--KQFHQSLRESSV 270
           W+        E K ER DE S  +G +S K GK+ ++++++RR+TY   Q   S+ E  V
Sbjct: 326 WS-------GERKFERFDECSGYRGTWSAKMGKRPILMEDSRRSTYCETQPSNSIYELPV 378

Query: 271 LTTFDADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWV 330
            ++++  KK L+ VG+  +  Y+RSLARFAA LGPV W+IA+R+IER L  G +FG GWV
Sbjct: 379 SSSYNGTKKLLVPVGVQLQQSYSRSLARFAAQLGPVCWEIASRQIERSLAPGTKFGRGWV 438

Query: 331 VEND 334
            + +
Sbjct: 439 GDGE 442


>gi|147776966|emb|CAN63414.1| hypothetical protein VITISV_007685 [Vitis vinifera]
          Length = 923

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/370 (40%), Positives = 201/370 (54%), Gaps = 38/370 (10%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY +VIEHPMDF TVR KL NG+Y T E+FE DVFLIC+NAMQYNAPDTIY +
Sbjct: 201 VDPEELPDYHDVIEHPMDFATVRKKLGNGSYRTFEEFESDVFLICTNAMQYNAPDTIYHK 260

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRP-PTKNFKKPLGRPSLERARSDFSSD 174
           QAR+I ELA+K F+ LR D   +E E K  R  +   ++  +K L     E+      S+
Sbjct: 261 QARAIQELARKKFQKLRIDIGRSEKELKSERSEKELKSERSEKELKPERFEKELKSERSE 320

Query: 175 VTLASGAENTALTNRDLGNGTPHLEK-------------------SGFTDSSRRFSGSWN 215
             L        L +       P ++K                   SG T S       W 
Sbjct: 321 KELKPERSEKDLKSEQKMRSNPLVKKQIKKPIFRTAQEPVGSDFXSGATLSHNGRCPEWP 380

Query: 216 DLYTGCLAE-------NKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRES 268
               G + E       N LE+ +E+   KG   K G+K  V+DENRR TY   +Q +  S
Sbjct: 381 SNVDGLIIESNPSQIDNNLEKAEELFSGKGLLSKFGRKPFVVDENRRATYSISNQPIVGS 440

Query: 269 -SVLTTFDADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGP 327
            ++  TF+A+ KQL+ VGLH++H Y RSLARFAA LGPVAWK+A++RIE+ LP G +FG 
Sbjct: 441 ETIFNTFEAEAKQLVAVGLHADHSYARSLARFAATLGPVAWKVASQRIEQALPVGSKFGR 500

Query: 328 GWVVENDLAPQRPLLLSSATVGLPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAED 387
           GWV E +  P   L+L +         +P L+P+       H+ +  K +K+++ P    
Sbjct: 501 GWVGEFEPLPTPVLMLETRI-----QKEPFLVPK-----LQHNAVLRKDEKISKPPVPAK 550

Query: 388 SSEKPGPSTQ 397
                GP+ +
Sbjct: 551 EHSVSGPTLE 560



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 8/49 (16%)

Query: 562 GLTPQQKP----DAVPPDLNVRFRSPGSP----NSSRVDSTQPDLALQL 602
           GL P  +P    + +PPDLN+ F+  GSP    +   VDS QPDLALQL
Sbjct: 875 GLNPNTQPRHRQETLPPDLNIGFQPSGSPVRQSSGVLVDSQQPDLALQL 923


>gi|242050090|ref|XP_002462789.1| hypothetical protein SORBIDRAFT_02g032020 [Sorghum bicolor]
 gi|241926166|gb|EER99310.1| hypothetical protein SORBIDRAFT_02g032020 [Sorghum bicolor]
          Length = 584

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/335 (44%), Positives = 203/335 (60%), Gaps = 40/335 (11%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY ++I+HPMDF T+R KL  GAY+ LEQFE DVFLI SNAM YN+PDTIY+R
Sbjct: 150 VDPEELPDYHDIIKHPMDFSTIRKKLDKGAYSNLEQFEDDVFLISSNAMCYNSPDTIYYR 209

Query: 116 QARSIHELAKKNFENLRQDSDDN--------------EPETKVVRRGRPPTK-NFKKPLG 160
           QAR I E+AKK+FENLRQDSD +              E      RRGRPP K N K+ +G
Sbjct: 210 QARGIQEIAKKDFENLRQDSDASEPEPEPEPEPEPELEEPKPQPRRGRPPNKNNAKQKVG 269

Query: 161 RPSLERARSDFSSDVTLASGAENTALTNRDLGNGTPHLEKSGFTD------SSRRFSGSW 214
           +P  ERA +DFS   TLA+ A        D       ++K+   D      +++R   +W
Sbjct: 270 KPPAERATADFSG-ATLATAANIGRHAQADFDLSRRVIDKAMIADVLRASFANQRNQHNW 328

Query: 215 NDLYTGCLAENKLERNDEVSLSKG-YSMKHGKKQVVLDENRRNTY--KQFHQSLRESSVL 271
           +        E K ER ++ S   G +S K GK+ ++++++RR+TY   Q   S+ E  V 
Sbjct: 329 S-------GERKFERIEDYSGYGGTWSAKMGKRPILMEDSRRSTYYDTQPSSSIYELPVS 381

Query: 272 TTFDADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVV 331
           ++++  KK L+ VG+  +  Y+RSLARFAA LGPV W+IA++RIER L  G +FG GWV 
Sbjct: 382 SSYNGTKKLLVPVGVQLQQSYSRSLARFAAQLGPVGWEIASKRIERSLAPGTKFGRGWVG 441

Query: 332 ENDL--APQRPLLLS-SATVGLPSS-----SQPSL 358
           + +   + Q P+L + S T+  PSS      QPS+
Sbjct: 442 DGETPNSFQPPVLAAFSETMTPPSSIAASGEQPSM 476


>gi|440577399|emb|CCI55422.1| PH01B031C15.5 [Phyllostachys edulis]
          Length = 724

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 202/577 (35%), Positives = 275/577 (47%), Gaps = 94/577 (16%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY E+IEHPMDF T+R KL N +YA LEQFE DVFL+ SNAM YN+ DTIY+R
Sbjct: 212 VDPEELPDYHEIIEHPMDFSTIREKLLNDSYANLEQFENDVFLLTSNAMSYNSDDTIYYR 271

Query: 116 Q---------------ARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLG 160
           Q               ARSI  LAKK+FENLRQ SD  E    V RRGRPP KN KK   
Sbjct: 272 QFFGNCYVNVHTVSQMARSIEALAKKDFENLRQASDGEEEPKTVPRRGRPP-KNAKK--- 327

Query: 161 RPSLERARSDFS---SDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDL 217
             ++E+A  D S   S+V  +  A+N     R  G+   H      T+ S R +   + L
Sbjct: 328 --TVEKADDDVSPDLSNVKTSKSADNAETRKRLTGDRARH------TNISTRDA---SIL 376

Query: 218 YTGCLAENKLERNDEVSLSKGYSMKHGKK--QVVLDENRRNTYKQFHQSLRESSVLTTFD 275
           +   L     +R D++    G S K+GKK     LD++RR+TY Q  Q  R S + +  D
Sbjct: 377 HHNTLGSFSGKRTDKIGDYSG-SSKYGKKTTSTSLDDDRRSTYDQ--QYSRNSPLFSALD 433

Query: 276 ADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVV---- 331
            ++K L+ VGL  +H Y+RSLARFAA LGP+ W +AA+ I R LP G  FGPGWVV    
Sbjct: 434 CERKLLVPVGLQQQHAYSRSLARFAAKLGPIGWDMAAKGIRRVLPPGTNFGPGWVVDGEP 493

Query: 332 -ENDLAPQRPLLLS-SATVGLPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSS 389
            +N   P+ P     SA   +P  +  S   E   S+   S     G+ + E   A++  
Sbjct: 494 PQNSQWPRVPQFTDPSAESSIPCCNMTSKSDELHRSSGLSSN----GNAIGEEHLAKN-- 547

Query: 390 EKPGPSTQSSLDGHFKKPNTSSLLVVNRFSEPAKEKAEIIEGLKSQLNLVNSSMGAINTR 449
            +P  ST +  D               + SE   +  +   G+K   + V    G     
Sbjct: 548 -QPMASTSAGFD---------------KSSEFGSKVPKYENGVKMPCDGV----GNTGPT 587

Query: 450 PPFQIHQNS-VIRPGMNGFNGTYGFNMPSQMGKLIGAAGPAGFSFQSPQMVDRISRTDTN 508
           PP Q H  S  I+  +NGF       +P+ + +        GF     QM         +
Sbjct: 588 PPLQQHSYSREIQSNINGFTA-----VPNTVSQYTA----QGFFGSGMQMTHAQVLGMFS 638

Query: 509 FVQPVTASSLNSDDPKLDCSRSLQ--NLESLGSAPSLPGNHQPTWQVSPHPKPDLGLTPQ 566
            V   T   ++      +C ++    ++    + PS    H P            G+ PQ
Sbjct: 639 GVNGRTNGYIHGHPLAAECVKTTHTGDVGKETTNPSQDAGHDPK-----------GVLPQ 687

Query: 567 QKPDAVPPDLNVRFRSPGSPNSSRV-DSTQPDLALQL 602
            +  + P  LN   +S GSP   +V +   PDLALQL
Sbjct: 688 NENRSAPSSLNAGIQSSGSPPRGKVANPKHPDLALQL 724


>gi|242042369|ref|XP_002468579.1| hypothetical protein SORBIDRAFT_01g048320 [Sorghum bicolor]
 gi|241922433|gb|EER95577.1| hypothetical protein SORBIDRAFT_01g048320 [Sorghum bicolor]
          Length = 641

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 197/585 (33%), Positives = 268/585 (45%), Gaps = 103/585 (17%)

Query: 39  RLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFL 98
           RL +  +Y   S     +D EELPDY ++IE PMDF T+R KL N +Y+ LEQFE DVFL
Sbjct: 139 RLQKKDTYGVFSE---PVDAEELPDYFDIIEQPMDFSTIREKLLNDSYSKLEQFEDDVFL 195

Query: 99  ICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKP 158
           + SNAM YN+ D+IYFRQARSI  LAKK+FENLRQ SD+ E      RRGRPP    K P
Sbjct: 196 LTSNAMSYNSADSIYFRQARSIEALAKKDFENLRQPSDEEEEPKPPARRGRPP----KNP 251

Query: 159 LGRPSLERARSDFSSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWND-- 216
                  R   D S D  L++   N    N D         K    D +R  +    D  
Sbjct: 252 -------RTEGDVSPD--LSNVKTNKTEDNVDT------FRKRSTGDRTRNTNTPMKDPS 296

Query: 217 LYTGCLAENKLERNDEVSLSKGYSMKHGKKQVV-LDENRRNTYKQFHQSLRESSVLTTFD 275
            +   L  +  +R D++    G S K GKK VV LD++RR+TY Q +   R SS+    D
Sbjct: 297 SFHNMLGSSSAKRADKIGDYSGSS-KWGKKPVVTLDDDRRSTYDQHYS--RNSSMFAALD 353

Query: 276 ADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDL 335
            ++K L+ VG+  +H Y RSLARFA+ LGPV W +A  RI R LP G  FGPGWVV+ + 
Sbjct: 354 DERKLLVPVGVQQQHAYARSLARFASKLGPVGWDVATNRIRRALPPGTSFGPGWVVDGE- 412

Query: 336 APQRPLLLSSATVGLPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPGPS 395
            PQ       A+      + P  +P              K D L           K GPS
Sbjct: 413 PPQNSQWAPVASTNPSECTAPPNMPS-------------KNDVL---------HHKSGPS 450

Query: 396 TQSSLDGHFKKPNTSSLLVVNRFSEPAKEKAEIIEGLKSQLNLVNSSMGAIN----TRPP 451
           +   + G    P T ++      S    +  EI   +    N VN + G ++      PP
Sbjct: 451 SNGDVTGEQHLPRTQAVAST---SASFDKGPEIPNKVTKHENGVNKACGGMDNTGSAAPP 507

Query: 452 FQIHQNS-VIRPGMNGFN------------GTYGFNMPSQMGKLIGAAGPAGFSFQSPQM 498
            Q H +S  I   +NGF             G +G  +P    +++G      FS     M
Sbjct: 508 MQQHSHSREIHSNINGFTAMSNTMSQYAGQGLFGSGIPMTHAQVLGM-----FS----GM 558

Query: 499 VDRISRTDTNFVQPVTASSLNSDDPKLDCSRSLQN-LESLGSAPSLPGNHQPTWQVSPHP 557
             +++  + +  QP TA SL +     D  ++  N ++  G  P +  ++      S HP
Sbjct: 559 NGKVNGYNMH-RQPATADSLKTTAQNGDVGKATVNPVQGAGHDPKIANDNN-----SAHP 612

Query: 558 KPDLGLTPQQKPDAVPPDLNVRFRSPGSPNSSRVDSTQPDLALQL 602
             + G+ P   P                P     +   PDLALQL
Sbjct: 613 SLNSGVQPSGSP----------------PRGKLANPKHPDLALQL 641


>gi|357120855|ref|XP_003562140.1| PREDICTED: uncharacterized protein LOC100830901 [Brachypodium
           distachyon]
          Length = 644

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 201/584 (34%), Positives = 278/584 (47%), Gaps = 94/584 (16%)

Query: 39  RLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFL 98
           RL +  +Y   S     +DPEELPDY E+IE PMDF T+R KL N +Y TLEQFE DVFL
Sbjct: 135 RLQKKDTYGVYSE---PVDPEELPDYHELIEQPMDFATIREKLLNDSYTTLEQFENDVFL 191

Query: 99  ICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVV-RRGRPPTKNFKK 157
           + SNAM YN+ DT+Y+RQARSI  LAKK+FENLRQ SD  E + K+  RRGRPP KN K+
Sbjct: 192 LTSNAMSYNSDDTVYYRQARSIEALAKKDFENLRQASDSEEEQPKIAPRRGRPP-KNAKR 250

Query: 158 PLGRPSLERARSDFSSDVT---LASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSW 214
                ++E+   D S D++       A+NT    R  G            D +R  + S 
Sbjct: 251 -----TVEKTERDVSPDLSNPKANKSADNTETRKRPAG------------DRTRNTNISM 293

Query: 215 ND---LYTGCLAENKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVL 271
            D   L+   L     +R D+  +  G S K+GKK   LD++RR+TY Q  Q    S + 
Sbjct: 294 RDSPILHHSILGSCSGKRTDKTGVCSGPS-KYGKKITYLDDDRRSTYDQ--QYSHHSPLF 350

Query: 272 TTFDADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVV 331
           +  D ++K L+ +G+  +H Y RSLARFAA LGPV W IAA+ I R LP   +FGPGWV 
Sbjct: 351 SALDCERKLLVPIGVQQQHAYARSLARFAAKLGPVGWDIAAKGIRRVLPE-EKFGPGWVG 409

Query: 332 ENDLAPQRPLLLSSATVGLPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEK 391
           + +       L +S    +P  + PS      SS  THS +  + D L    E   + + 
Sbjct: 410 DGEP------LQNSQWARVPVFTDPSA----ESSIPTHS-MTSRSDDLHRNSELSSNGDV 458

Query: 392 PGPSTQSSLDGHFKKPNTSSLLVVNRFSEPAKEKAEIIEGLKSQLNLVNSSMGAINT--R 449
            G    +       KP  S+    ++ S  A +  + + G+    +      G  NT   
Sbjct: 459 TGEEHPTR-----NKPVASTSTGFDKNSALASKPPKYVNGVSMSCD------GVANTGPT 507

Query: 450 PPFQIHQNSVIRPGMNGFNGTYGFNMPSQMGKLIGAA--GPAGFSFQSPQMVDRISRTDT 507
           PP Q H +S     +NG        +P  +G+  G    GP G      Q++   S  + 
Sbjct: 508 PPLQQHGHSQETSNINGITA-----VPHTIGQYTGQGLFGP-GMQMTHAQVLGMFSGVNG 561

Query: 508 N-----FVQPVTASSLNSDDPKLDCSRSLQN--LESLGSAPSLPGNHQPTWQVSPHPKPD 560
                    P+ A S+          ++ QN  +  + + PS    H             
Sbjct: 562 RANGYLHGHPLAAESV----------KTAQNGVIGKITANPSQDAGHD-----------Q 600

Query: 561 LGLTPQQKPDAVPPDLNVRFRSP-GSPNSSRV-DSTQPDLALQL 602
            G +PQ    +  P LN     P GSP   +V +   PDLALQL
Sbjct: 601 KGASPQNDNSSASPSLNNAGVQPSGSPPRGKVVNPKHPDLALQL 644


>gi|356569784|ref|XP_003553076.1| PREDICTED: uncharacterized protein LOC100793896 [Glycine max]
          Length = 857

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 138/298 (46%), Positives = 180/298 (60%), Gaps = 17/298 (5%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLAN-GAYATLEQFEKDVFLICSNAMQYNAPDTIYF 114
           +DPEELPDY +VI+HPMDF TVR KL N  +Y TLEQFE DVFLICSNAMQYNAP+TIY 
Sbjct: 187 VDPEELPDYHDVIKHPMDFATVRKKLGNESSYTTLEQFESDVFLICSNAMQYNAPETIYH 246

Query: 115 RQARSIHELAKKNFENLRQDSDDNEPETKVVRRGRP---PTKNFKKPLGRPSLERARSDF 171
           +QARSI EL +K FE LR   + ++ E K  ++        K  KKPL   S E   SDF
Sbjct: 247 KQARSIQELGRKKFEKLRIGFERSQIELKSEQKAGSNYLVKKQPKKPLACASQEPVGSDF 306

Query: 172 SSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERND 231
           SS  TLA+ A+            T HL +SG  + +    G           +   E+ +
Sbjct: 307 SSGATLATIADVQP---------TSHLMQSGRCERTGNIGGILE--ANAFWIDANQEKAE 355

Query: 232 EVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSL-RESSVLTTFDADKKQLMTVGLHSEH 290
           +V   K    K G+K  VLDE+RR +Y   +  + R  S+  TF++  K L+TVGLH+E+
Sbjct: 356 DVLSGKVLLSKWGRKSFVLDESRRASYNMSNLPIARSDSIFMTFESGMKHLVTVGLHAEY 415

Query: 291 GYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLSSATV 348
            Y RS+ARF+A+LGP+AWKIA+ RI + LPAG  FG GWV E +  P  P+L+ +  V
Sbjct: 416 SYARSVARFSASLGPIAWKIASHRIHQALPAGCEFGRGWVGEYEALPT-PVLMVNNCV 472



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 11/70 (15%)

Query: 541 PSLPGNHQPTWQVSPHPKPDLGLTP----QQKPDAVPPDLNVRFRSPGSPNSSR----VD 592
           P L    Q  +Q+     P  GL+P    +Q+ +A+PPDLN+ F+SPGSP        VD
Sbjct: 791 PQLASFDQSRFQIQ---SPWRGLSPCSLSRQREEALPPDLNIGFQSPGSPAKQTSGVPVD 847

Query: 593 STQPDLALQL 602
           S QPDLALQL
Sbjct: 848 SQQPDLALQL 857


>gi|414886627|tpg|DAA62641.1| TPA: hypothetical protein ZEAMMB73_689472 [Zea mays]
          Length = 570

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 150/334 (44%), Positives = 203/334 (60%), Gaps = 35/334 (10%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY ++I+HPMDF T+R KL   AY  LEQFE DVFLI SNAM YN+PDTIY+R
Sbjct: 141 VDPEELPDYHDIIKHPMDFSTIRKKLDKEAYFNLEQFEDDVFLITSNAMCYNSPDTIYYR 200

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVV----------------RRGRPPTK-NFKKP 158
           QAR I E+AKK+FENLRQDSD +EPE +                  RRGRPP K N K+ 
Sbjct: 201 QARGIQEIAKKDFENLRQDSDASEPEPEPEREPKPEPEPEEPKPQPRRGRPPNKNNAKQK 260

Query: 159 LGRPSLERARSDFSSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSR-RFSGSWNDL 217
           +G+P  ERA +DFS   TLA+ A        D+      ++K+   D  R  F+   N+ 
Sbjct: 261 VGKPPAERATADFSG-ATLATAANIGRHAQADVDLSRRVMDKAMIADVLRASFANLRNEH 319

Query: 218 -YTGCLAENKLERNDEVSLSKG-YSMKHGKKQVVLDENRRNTY--KQFHQSLRESSVLTT 273
            ++G   E K ER +  S   G +S K GK+ ++++++RR+TY   Q   S+ E  V ++
Sbjct: 320 NWSG---ERKFERLEAYSGYGGTWSAKTGKRPILMEDSRRSTYYETQPSSSIYELPVSSS 376

Query: 274 FDADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVEN 333
           ++  +K L+ VG+     Y+ SLARFAA LGPV W+IA+RR+ER L  G +FG GWV + 
Sbjct: 377 YNGTEKLLVPVGVQLPQSYSHSLARFAAQLGPVGWEIASRRLERSLAPGTKFGRGWVGDG 436

Query: 334 DLAP---QRPLLLS-SATVGLPSS-----SQPSL 358
           +  P   Q P+L + S T+  PSS      QPS+
Sbjct: 437 ETPPNPFQTPVLAAFSETMAPPSSIAASGEQPSM 470


>gi|326517914|dbj|BAK07209.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 576

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 136/289 (47%), Positives = 184/289 (63%), Gaps = 24/289 (8%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D EELPDY ++++HPMDF TVR KL  GAYA LEQFE DVFLI SNAM YN+PDT+Y+R
Sbjct: 151 VDDEELPDYKDIVKHPMDFSTVRKKLDKGAYANLEQFEDDVFLITSNAMCYNSPDTVYYR 210

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVV---------RRGRPPTKNFKKPLGRPSLER 166
           QARSI E+AKK+FENLRQDSD +EPE + +         RRGRPP    K+ + +P  ER
Sbjct: 211 QARSIQEVAKKDFENLRQDSDASEPEPEPLPEPEPKPQRRRGRPPKNAVKQQVEQPPAER 270

Query: 167 ARSDFSSDVTLASGAEN--TALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAE 224
           A ++FS+  TLA+   +   A +  D+      + K+ F  + R    +W+       +E
Sbjct: 271 ATANFSA-ATLATAGNSGLYAHSGYDIQRRIADVLKASF--AHRNNEHTWS-------SE 320

Query: 225 NKLERNDEVSLSKG-YSMKHGKKQVVLDENRRNTYKQFH--QSLRESSVLTTFDADKKQL 281
            KLE  +  S S   +S K GKK ++++E+RR TY Q     SL E  V T+++  +K L
Sbjct: 321 RKLESIENYSGSGSKWSGKMGKKPLLVEESRRTTYYQNQPSSSLYELPVATSYNGTRKVL 380

Query: 282 MTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWV 330
           + +G      Y+RSLARFAA LGPV W++A+ RIER +P G+ FG GWV
Sbjct: 381 VPIGAQLPQAYSRSLARFAAQLGPVGWEVASNRIERAIPPGITFGRGWV 429


>gi|357494567|ref|XP_003617572.1| Bromodomain-containing protein [Medicago truncatula]
 gi|355518907|gb|AET00531.1| Bromodomain-containing protein [Medicago truncatula]
          Length = 959

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/314 (43%), Positives = 189/314 (60%), Gaps = 16/314 (5%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY +VI++PMDF TVR KLANG+Y TLEQFE DVFLICSNAMQYN+ DTIY +
Sbjct: 223 VDPEELPDYHDVIDNPMDFATVRKKLANGSYTTLEQFESDVFLICSNAMQYNSSDTIYHK 282

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPT---KNFKKPLGRPSLERARSDFS 172
           QARSI ELA+K FE LR + + ++ E K  ++    +   K  K+PLG  S E   SDF 
Sbjct: 283 QARSIQELARKKFEKLRINLERSQSELKSEQKTGSNSLGKKLAKRPLGYTSQEPVGSDFC 342

Query: 173 SDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDE 232
           S  TLA+  +   ++     +   H  +    +      G    L +    +   E+ ++
Sbjct: 343 SGATLATTGDVLPIS-----HPISHPMQGILCERPGNIDGL---LGSSFFIDANQEKAED 394

Query: 233 VSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSL-RESSVLTTFDADKKQLMTVGLHSEHG 291
               KG   K G+K  V +  RR TY   +  + R  SV TTF+++ KQL+TVGL +E+ 
Sbjct: 395 FISGKGLLSKMGRKSTVQEYERRATYNMSNLPVTRSDSVFTTFESELKQLVTVGLQAEYS 454

Query: 292 YTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLSSATVGLP 351
           Y RSLAR+AA LGP AW+IA+++I++ LP+G ++G GWV E +  P   L+L +      
Sbjct: 455 YARSLARYAATLGPTAWRIASQKIQQALPSGCKYGRGWVGEYEPLPTPVLMLDNRV---- 510

Query: 352 SSSQPSLIPENLSS 365
              QPSL  + LS+
Sbjct: 511 QKEQPSLATKLLST 524



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 38/60 (63%), Gaps = 11/60 (18%)

Query: 548 QPTWQ-VSPHPKPDLGLTPQQKPDAVPPDLNVRFRSPGSPNSSR----VDSTQPDLALQL 602
           QP WQ V PH +P      +QK + +PPDLNV F+SPGSP        VDS QPDLALQL
Sbjct: 906 QPPWQAVRPHSQP------RQKQETLPPDLNVDFQSPGSPAKQSSGVLVDSQQPDLALQL 959


>gi|222624142|gb|EEE58274.1| hypothetical protein OsJ_09289 [Oryza sativa Japonica Group]
          Length = 662

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 198/548 (36%), Positives = 270/548 (49%), Gaps = 91/548 (16%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D EELPDY E+IEHPMDF T+R KL N +Y TLEQFE DVFL+ SNAM YN+ DT+Y+R
Sbjct: 164 VDHEELPDYHEIIEHPMDFSTIREKLLNDSYTTLEQFENDVFLLTSNAMSYNSDDTVYYR 223

Query: 116 QARSIHELAKKNFENLRQDS---DDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFS 172
           QARSI  LAKK+FENLRQ S   ++ +P+T V RRGRPP K  KK      +E+  +D S
Sbjct: 224 QARSIEALAKKDFENLRQASEPEEEQQPKT-VPRRGRPP-KYAKK------IEKTENDVS 275

Query: 173 SDVTLA-SGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERND 231
            D++ A + + + A T R    G    +++   + + R S        G  A  + +R  
Sbjct: 276 PDLSNAKTKSADHAETIRKRLTG----DRTRNANITTRDSPFLQHNTPGSFAGKRTDRFG 331

Query: 232 EVSLSKGYSMKHGKKQ--VVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVGLHSE 289
           + S   G S K+GKK    + D+ RR+TY Q  Q    S + +    ++K L+ VGL  +
Sbjct: 332 DYS---GPS-KYGKKTTPTISDDERRSTYDQ--QYFHSSPLFSALGGERKVLVPVGLQQQ 385

Query: 290 HGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVV-----ENDLAPQRPLLL- 343
           H Y RSLARFAA  GPV W IAA+RI R LP+G  FGPGWVV     EN   P+ P+L  
Sbjct: 386 HAYARSLARFAAKFGPVGWDIAAKRIRRLLPSGTNFGPGWVVDGEPPENSQWPRVPMLSD 445

Query: 344 -SSATVGLPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPG-PSTQSSLD 401
            S  + G+P+S   ++I +N                       ++S++K G  S + S +
Sbjct: 446 PSIQSTGVPAS---NVISKN-----------------------DESNQKSGLTSNEDSGE 479

Query: 402 GHFKK--PNTSSLLVVNRFSEPAKEKAEIIEGLKSQLNLVNSSMGAINTRPPFQIHQNS- 458
            H  +  P  S+   VN  S  A + A   E   +  N+    +G+    PP Q H +S 
Sbjct: 480 EHLARTEPVASTSACVNTNSVSATKLATKCE---NGANVSCDGVGSTGQTPPLQQHSHSR 536

Query: 459 VIRPGMNGFN---------------GTYGFNMPSQMGKLIGAAGPA-GFSFQSPQMVDRI 502
            I   MNGF                G         +G   G  G   GF    P + + I
Sbjct: 537 EIHSNMNGFTALPNTISQYAGQGFLGQMQLTHAQVLGMFSGVNGRTNGFIHGHPLVANSI 596

Query: 503 SRTDTNFVQPVTASSLNSDDPKLDCSRSL-QNLESLGSAPSLPGNHQPTWQV------SP 555
                  V  V  +   S D   D   +L Q + S  SAPSL    QP+  +      +P
Sbjct: 597 KAPQNGDVGKVATNP--SPDAGHDSEAALSQTMTS--SAPSLSAGVQPSGSMPSEKLANP 652

Query: 556 HPKPDLGL 563
              PDL L
Sbjct: 653 KKHPDLAL 660


>gi|449455722|ref|XP_004145600.1| PREDICTED: uncharacterized protein LOC101217603 [Cucumis sativus]
 gi|449485260|ref|XP_004157116.1| PREDICTED: uncharacterized protein LOC101224986 [Cucumis sativus]
          Length = 693

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 135/271 (49%), Positives = 175/271 (64%), Gaps = 17/271 (6%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DP +LPDY  +I++PMDFGTVR KL  GAYA LEQFE+D+FLICSNAM+YNA DT++FR
Sbjct: 186 VDPNDLPDYHVIIQNPMDFGTVRTKLDEGAYANLEQFEEDIFLICSNAMKYNASDTVFFR 245

Query: 116 QARSIHELAKKNFENLRQD-SDDNEPETKVVRRGRPPTKNFKKPLG-RPSLERARSDFSS 173
           QARSI ELAKK+FENLR++ SD++EPE KVVRRGRPP K+ KK LG   +++   ++F S
Sbjct: 246 QARSIQELAKKDFENLRRESSDESEPEQKVVRRGRPPGKSLKKSLGIGNAIDSNGAEFCS 305

Query: 174 DVTLASGAENTALTNRDLGNGTPHLEKSGF----TDSSRRFS---GSWNDLYTGCLAENK 226
             TLASG +++   N           +S F     D   R S       +     L E K
Sbjct: 306 GATLASGCDDSYNVN----GYNLRRARSTFRPLPADPLARTSTAQAQHGETLASWLPEWK 361

Query: 227 LERNDEVSLSKGYSMKHGKK-QVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVG 285
           +E     S+ KG  +K GK   + ++ENRR+TY +        SV    D D KQL+TVG
Sbjct: 362 IEF--PASVLKGV-LKSGKNDNMAVNENRRDTYNRSTSCGNWPSVFGDLDGDLKQLITVG 418

Query: 286 LHSEHGYTRSLARFAANLGPVAWKIAARRIE 316
           LH+EHGY RSLA FAA+LGP  W IA ++I+
Sbjct: 419 LHAEHGYARSLALFAADLGPAVWNIALKKIK 449


>gi|115450513|ref|NP_001048857.1| Os03g0130800 [Oryza sativa Japonica Group]
 gi|113547328|dbj|BAF10771.1| Os03g0130800, partial [Oryza sativa Japonica Group]
          Length = 619

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 198/548 (36%), Positives = 270/548 (49%), Gaps = 91/548 (16%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D EELPDY E+IEHPMDF T+R KL N +Y TLEQFE DVFL+ SNAM YN+ DT+Y+R
Sbjct: 121 VDHEELPDYHEIIEHPMDFSTIREKLLNDSYTTLEQFENDVFLLTSNAMSYNSDDTVYYR 180

Query: 116 QARSIHELAKKNFENLRQDS---DDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFS 172
           QARSI  LAKK+FENLRQ S   ++ +P+T V RRGRPP K  KK      +E+  +D S
Sbjct: 181 QARSIEALAKKDFENLRQASEPEEEQQPKT-VPRRGRPP-KYAKK------IEKTENDVS 232

Query: 173 SDVTLA-SGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERND 231
            D++ A + + + A T R    G    +++   + + R S        G  A  + +R  
Sbjct: 233 PDLSNAKTKSADHAETIRKRLTG----DRTRNANITTRDSPFLQHNTPGSFAGKRTDRFG 288

Query: 232 EVSLSKGYSMKHGKKQ--VVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVGLHSE 289
           + S   G S K+GKK    + D+ RR+TY Q  Q    S + +    ++K L+ VGL  +
Sbjct: 289 DYS---GPS-KYGKKTTPTISDDERRSTYDQ--QYFHSSPLFSALGGERKVLVPVGLQQQ 342

Query: 290 HGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVV-----ENDLAPQRPLLL- 343
           H Y RSLARFAA  GPV W IAA+RI R LP+G  FGPGWVV     EN   P+ P+L  
Sbjct: 343 HAYARSLARFAAKFGPVGWDIAAKRIRRLLPSGTNFGPGWVVDGEPPENSQWPRVPMLSD 402

Query: 344 -SSATVGLPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPG-PSTQSSLD 401
            S  + G+P+S   ++I +N                       ++S++K G  S + S +
Sbjct: 403 PSIQSTGVPAS---NVISKN-----------------------DESNQKSGLTSNEDSGE 436

Query: 402 GHFKK--PNTSSLLVVNRFSEPAKEKAEIIEGLKSQLNLVNSSMGAINTRPPFQIHQNS- 458
            H  +  P  S+   VN  S  A + A   E   +  N+    +G+    PP Q H +S 
Sbjct: 437 EHLARTEPVASTSACVNTNSVSATKLATKCE---NGANVSCDGVGSTGQTPPLQQHSHSR 493

Query: 459 VIRPGMNGFN---------------GTYGFNMPSQMGKLIGAAGPA-GFSFQSPQMVDRI 502
            I   MNGF                G         +G   G  G   GF    P + + I
Sbjct: 494 EIHSNMNGFTALPNTISQYAGQGFLGQMQLTHAQVLGMFSGVNGRTNGFIHGHPLVANSI 553

Query: 503 SRTDTNFVQPVTASSLNSDDPKLDCSRSL-QNLESLGSAPSLPGNHQPTWQV------SP 555
                  V  V  +   S D   D   +L Q + S  SAPSL    QP+  +      +P
Sbjct: 554 KAPQNGDVGKVATNP--SPDAGHDSEAALSQTMTS--SAPSLSAGVQPSGSMPSEKLANP 609

Query: 556 HPKPDLGL 563
              PDL L
Sbjct: 610 KKHPDLAL 617


>gi|357159892|ref|XP_003578590.1| PREDICTED: uncharacterized protein LOC100827623 [Brachypodium
           distachyon]
          Length = 567

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 163/459 (35%), Positives = 242/459 (52%), Gaps = 74/459 (16%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY ++++ PMDF TVR KL  GAY  LEQFE DVFLI SNAM YN+PDTIY+R
Sbjct: 142 VDPEELPDYHDIVKDPMDFQTVRKKLDKGAYTILEQFEDDVFLITSNAMCYNSPDTIYYR 201

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVV---------------------RRGRPPTKN 154
           QAR+I E+AKK+FENLRQDSD +EPE +                       RRGRPP  +
Sbjct: 202 QARAIQEVAKKDFENLRQDSDASEPEPEPKPKPKAKPEPEPLPEQEPKPQRRRGRPPKNS 261

Query: 155 FKKPLGRPSLERARSDFSSDVTLASGAE--NTALTNRDLGNGTPHLEKSGFTDSSRRFSG 212
            K  +GRP  ERA  +F     LA+G    + A +  DL      + K+ F  ++R    
Sbjct: 262 AKPNIGRPPAERAPPEFPG-AALATGGNSGHHAHSGFDLQRRIADVLKASF--ANRNNEH 318

Query: 213 SWNDLYTGCLAENKLERNDEVSLSKG-YSMKHGKKQVVLDENRRNTYKQFHQ---SLRES 268
           +W+       +E K+E  ++ S S   +S K  KK ++++E+RR+TY   HQ   S+ E 
Sbjct: 319 NWS-------SERKMESIEDYSGSGSKWSGKMAKKPLLVEESRRSTYYH-HQPSSSIYEL 370

Query: 269 SVLTTFDADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPG 328
            V T+++  +K L+ VG+  +  Y+RSLARFAA LG  AW++A++RIE+ +P G+ FG G
Sbjct: 371 PVATSYNGTRKILVPVGVQWQQSYSRSLARFAAQLGSAAWEVASKRIEQVIPPGITFGRG 430

Query: 329 WV----VENDLAPQRPLLLSSATVGLPSSSQPSLIPENLSSASTHSTIELKGDKLTERPE 384
           WV      N   P  P+  SS+T  +P        P + +++S   T++           
Sbjct: 431 WVGDFETSNTFRP--PVPTSSSTAMMP--------PSSTAASSEQQTVD----------- 469

Query: 385 AEDSSEKPGPSTQSSLDGHFKKPNTSSLLVVNRFSEPAKEKAEIIEGLKSQLNLVNSSMG 444
                    P+++S   G     + +S     R    A    +   G   Q++ ++    
Sbjct: 470 --------DPASRSHSAGPPHTASCASTDTAQRIDSQALPSQQC--GSLPQVS-IDRGEH 518

Query: 445 AINTRPPFQIHQNSVIRPGMNGFNGTYGFNMPSQMGKLI 483
           A+ T+    +H  + +   +NGFN   G NM +   +L+
Sbjct: 519 AVETKSSHNVHARAAMHQTVNGFNAVPGSNMFAPTAQLV 557


>gi|108706011|gb|ABF93806.1| Bromodomain containing protein, expressed [Oryza sativa Japonica
           Group]
          Length = 722

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 198/548 (36%), Positives = 270/548 (49%), Gaps = 91/548 (16%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D EELPDY E+IEHPMDF T+R KL N +Y TLEQFE DVFL+ SNAM YN+ DT+Y+R
Sbjct: 224 VDHEELPDYHEIIEHPMDFSTIREKLLNDSYTTLEQFENDVFLLTSNAMSYNSDDTVYYR 283

Query: 116 QARSIHELAKKNFENLRQDS---DDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFS 172
           QARSI  LAKK+FENLRQ S   ++ +P+T V RRGRPP K  KK      +E+  +D S
Sbjct: 284 QARSIEALAKKDFENLRQASEPEEEQQPKT-VPRRGRPP-KYAKK------IEKTENDVS 335

Query: 173 SDVTLA-SGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERND 231
            D++ A + + + A T R    G    +++   + + R S        G  A  + +R  
Sbjct: 336 PDLSNAKTKSADHAETIRKRLTG----DRTRNANITTRDSPFLQHNTPGSFAGKRTDRFG 391

Query: 232 EVSLSKGYSMKHGKKQ--VVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVGLHSE 289
           + S   G S K+GKK    + D+ RR+TY Q  Q    S + +    ++K L+ VGL  +
Sbjct: 392 DYS---GPS-KYGKKTTPTISDDERRSTYDQ--QYFHSSPLFSALGGERKVLVPVGLQQQ 445

Query: 290 HGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVV-----ENDLAPQRPLLL- 343
           H Y RSLARFAA  GPV W IAA+RI R LP+G  FGPGWVV     EN   P+ P+L  
Sbjct: 446 HAYARSLARFAAKFGPVGWDIAAKRIRRLLPSGTNFGPGWVVDGEPPENSQWPRVPMLSD 505

Query: 344 -SSATVGLPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPG-PSTQSSLD 401
            S  + G+P+S   ++I +N                       ++S++K G  S + S +
Sbjct: 506 PSIQSTGVPAS---NVISKN-----------------------DESNQKSGLTSNEDSGE 539

Query: 402 GHFKK--PNTSSLLVVNRFSEPAKEKAEIIEGLKSQLNLVNSSMGAINTRPPFQIHQNS- 458
            H  +  P  S+   VN  S  A + A   E   +  N+    +G+    PP Q H +S 
Sbjct: 540 EHLARTEPVASTSACVNTNSVSATKLATKCE---NGANVSCDGVGSTGQTPPLQQHSHSR 596

Query: 459 VIRPGMNGFN---------------GTYGFNMPSQMGKLIGAAGPA-GFSFQSPQMVDRI 502
            I   MNGF                G         +G   G  G   GF    P + + I
Sbjct: 597 EIHSNMNGFTALPNTISQYAGQGFLGQMQLTHAQVLGMFSGVNGRTNGFIHGHPLVANSI 656

Query: 503 SRTDTNFVQPVTASSLNSDDPKLDCSRSL-QNLESLGSAPSLPGNHQPTWQV------SP 555
                  V  V  +   S D   D   +L Q + S  SAPSL    QP+  +      +P
Sbjct: 657 KAPQNGDVGKVATNP--SPDAGHDSEAALSQTMTS--SAPSLSAGVQPSGSMPSEKLANP 712

Query: 556 HPKPDLGL 563
              PDL L
Sbjct: 713 KKHPDLAL 720


>gi|357459703|ref|XP_003600132.1| Bromodomain-containing protein [Medicago truncatula]
 gi|355489180|gb|AES70383.1| Bromodomain-containing protein [Medicago truncatula]
          Length = 841

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/292 (43%), Positives = 171/292 (58%), Gaps = 22/292 (7%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY +VIEHPMDF TVR KLANGAY TLEQ E D+FLICSNAM+YNAP+T+Y R
Sbjct: 177 VDPEELPDYHDVIEHPMDFATVRKKLANGAYPTLEQLESDIFLICSNAMKYNAPETVYHR 236

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPT---KNFKKPLGRPSLERARSDFS 172
           QAR+I EL +K FE LR   +  + E K  ++ R  +   K+ KKP    S E    D S
Sbjct: 237 QARTIQELGRKKFEKLRIKFERTQVELKSEQKTRSNSLVKKSLKKPPSCASQESFGFDLS 296

Query: 173 SDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDE 232
                AS       +    GN    +E + F                  + +   ++ ++
Sbjct: 297 YGDVQASSYPMQGGSCERPGNIDGTVEGNAF------------------MIDANQDKAED 338

Query: 233 VSLSKGYSMKHGKKQVVLDENRRNTYKQFHQS-LRESSVLTTFDADKKQLMTVGLHSEHG 291
           V   K    K G+K  VLD+NRR +Y   +Q  +R  S   TF++  +QL+TVG+H+E+ 
Sbjct: 339 VMSGKNMVSKMGRKSFVLDDNRRASYNMSNQPIIRTDSTFMTFESGMRQLVTVGIHAEYS 398

Query: 292 YTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLL 343
           YTRSLARF+A+LGPV W IA+ RI++ LPA  +FG GWV E +  P    +L
Sbjct: 399 YTRSLARFSASLGPVVWNIASNRIQQALPADCKFGRGWVGEYEPIPTPIFML 450



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 8/59 (13%)

Query: 548 QPTWQVSPHPKPDLGLTPQ----QKPDAVPPDLNVRFRSPGSPNSSRVDSTQPDLALQL 602
           +PT+Q+     P  GL+P+    QK   +PPDLN+  +SPGSP  S   S QPDLALQL
Sbjct: 787 RPTFQMQ---SPWRGLSPRSQSRQKQGTLPPDLNIDCQSPGSPAKSS-SSQQPDLALQL 841


>gi|414886626|tpg|DAA62640.1| TPA: hypothetical protein ZEAMMB73_689472 [Zea mays]
          Length = 562

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 146/333 (43%), Positives = 197/333 (59%), Gaps = 45/333 (13%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY ++I+HPMDF T+R KL   AY  LEQFE DVFLI SNAM YN+PDTIY+R
Sbjct: 141 VDPEELPDYHDIIKHPMDFSTIRKKLDKEAYFNLEQFEDDVFLITSNAMCYNSPDTIYYR 200

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVV----------------RRGRPPTK-NFKKP 158
           QAR I E+AKK+FENLRQDSD +EPE +                  RRGRPP K N K+ 
Sbjct: 201 QARGIQEIAKKDFENLRQDSDASEPEPEPEREPKPEPEPEEPKPQPRRGRPPNKNNAKQK 260

Query: 159 LGRPSLERARSDFSSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLY 218
           +G+P  ERA +DFS   TLA+ A        D+      ++K+   D  R    S+ +L 
Sbjct: 261 VGKPPAERATADFSG-ATLATAANIGRHAQADVDLSRRVMDKAMIADVLR---ASFANL- 315

Query: 219 TGCLAENKLERNDEVSLSKG--YSMKHGKKQVVLDENRRNTY--KQFHQSLRESSVLTTF 274
                     RN+      G  +S K GK+ ++++++RR+TY   Q   S+ E  V +++
Sbjct: 316 ----------RNEHNWSGYGGTWSAKTGKRPILMEDSRRSTYYETQPSSSIYELPVSSSY 365

Query: 275 DADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVEND 334
           +  +K L+ VG+     Y+ SLARFAA LGPV W+IA+RR+ER L  G +FG GWV + +
Sbjct: 366 NGTEKLLVPVGVQLPQSYSHSLARFAAQLGPVGWEIASRRLERSLAPGTKFGRGWVGDGE 425

Query: 335 LAP---QRPLLLS-SATVGLPSS-----SQPSL 358
             P   Q P+L + S T+  PSS      QPS+
Sbjct: 426 TPPNPFQTPVLAAFSETMAPPSSIAASGEQPSM 458


>gi|218192021|gb|EEC74448.1| hypothetical protein OsI_09853 [Oryza sativa Indica Group]
          Length = 521

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/313 (44%), Positives = 181/313 (57%), Gaps = 46/313 (14%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D EELPDY E+IEHPMDF T+R KL N +Y TLEQFE DVFL+ SNAM YN+ DT+Y+R
Sbjct: 80  VDHEELPDYHEIIEHPMDFSTIREKLLNDSYTTLEQFENDVFLLTSNAMSYNSDDTVYYR 139

Query: 116 QARSIHELAKKNFENLRQDS---DDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFS 172
           QARSI  LAKK+FENLRQ S   ++ +P+T V RRGRPP K  KK      +E+  +D S
Sbjct: 140 QARSIEALAKKDFENLRQASEPEEEQQPKT-VPRRGRPP-KYAKK------IEKTENDVS 191

Query: 173 SDVTLA---SGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLER 229
            D++ A   S      +  R  G+ T     +  T     F                L+ 
Sbjct: 192 PDLSNAKTKSADHAETIRKRLTGDRT---RNANITTRDSPF----------------LQH 232

Query: 230 NDEVSLSKGYSMKHGKKQ--VVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVGLH 287
           N   S +     K+GKK    + D+ RR+TY Q  Q    S + +  D ++K L+ VGL 
Sbjct: 233 NTPGSFAG--PSKYGKKTTPTISDDERRSTYDQ--QYFHSSPLFSALDGERKVLVPVGLQ 288

Query: 288 SEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVV-----ENDLAPQRPLL 342
            +H Y RSLARFAA  GPV W+IAA+RI R LP+G  FGPGWVV     EN   P+ P+L
Sbjct: 289 QQHAYARSLARFAAKFGPVGWEIAAKRIRRLLPSGTNFGPGWVVDGEPPENSQWPRVPML 348

Query: 343 L--SSATVGLPSS 353
              S  + G+P+S
Sbjct: 349 SDPSIQSTGVPAS 361


>gi|194705184|gb|ACF86676.1| unknown [Zea mays]
 gi|195614342|gb|ACG29001.1| DNA binding protein [Zea mays]
 gi|413956934|gb|AFW89583.1| DNA binding protein [Zea mays]
          Length = 624

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/298 (44%), Positives = 179/298 (60%), Gaps = 28/298 (9%)

Query: 39  RLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFL 98
           RL +  +Y   S     +D EELPDY ++I+HPMDF T+R KL N +Y+ LEQFE DVFL
Sbjct: 127 RLQKKDTYGVFSE---PVDAEELPDYFDIIDHPMDFSTIREKLLNDSYSKLEQFEDDVFL 183

Query: 99  ICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKP 158
           + SNAM YN+ DTIYFRQARSI  LAKK+FENLRQ SD+ EP+    RRGRPP KN    
Sbjct: 184 LTSNAMSYNSADTIYFRQARSIEALAKKDFENLRQPSDEEEPKPP-ARRGRPP-KN---- 237

Query: 159 LGRPSLERARSDFSSDVT--LASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWND 216
              P +E    D S D++    S  E++  T R    G    + +  T+++ +   S++ 
Sbjct: 238 ---PKME---GDASPDLSNMKTSKPEDSIDTFRKKSTG----DITRNTNTTMKEPSSFHS 287

Query: 217 LYTGCLAENKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDA 276
           +    L     +R D++    G S K GKK V +D++RR+TY Q +     SS+    D 
Sbjct: 288 M----LGSFSAKRADKIGDYSGSS-KWGKKPVGVDDDRRSTYDQHYSC--NSSLFAALDD 340

Query: 277 DKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVEND 334
            +K L+ VG+  +H Y RSLARFA+ LGPV W + A RI R LP G  FGPGWVV+ +
Sbjct: 341 GRKLLVPVGVQQQHAYARSLARFASKLGPVGWDVTANRIRRALPPGTSFGPGWVVDGE 398


>gi|215706392|dbj|BAG93248.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 483

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 186/532 (34%), Positives = 256/532 (48%), Gaps = 91/532 (17%)

Query: 72  MDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENL 131
           MDF T+R KL N +Y TLEQFE DVFL+ SNAM YN+ DT+Y+RQARSI  LAKK+FENL
Sbjct: 1   MDFSTIREKLLNDSYTTLEQFENDVFLLTSNAMSYNSDDTVYYRQARSIEALAKKDFENL 60

Query: 132 RQDS---DDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSDVTLA-SGAENTALT 187
           RQ S   ++ +P+T V RRGRPP K  KK      +E+  +D S D++ A + + + A T
Sbjct: 61  RQASEPEEEQQPKT-VPRRGRPP-KYAKK------IEKTENDVSPDLSNAKTKSADHAET 112

Query: 188 NRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDEVSLSKGYSMKHGKKQ 247
            R    G    +++   + + R S        G  A  + +R  + S   G S K+GKK 
Sbjct: 113 IRKRLTG----DRTRNANITTRDSPFLQHNTPGSFAGKRTDRFGDYS---GPS-KYGKKT 164

Query: 248 --VVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVGLHSEHGYTRSLARFAANLGP 305
              + D+ RR+TY Q  Q    S + +    ++K L+ VGL  +H Y RSLARFAA  GP
Sbjct: 165 TPTISDDERRSTYDQ--QYFHSSPLFSALGGERKVLVPVGLQQQHAYARSLARFAAKFGP 222

Query: 306 VAWKIAARRIERCLPAGVRFGPGWVV-----ENDLAPQRPLLL--SSATVGLPSSSQPSL 358
           V W IAA+RI R LP+G  FGPGWVV     EN   P+ P+L   S  + G+P+S   ++
Sbjct: 223 VGWDIAAKRIRRLLPSGTNFGPGWVVDGEPPENSQWPRVPMLSDPSIQSTGVPAS---NV 279

Query: 359 IPENLSSASTHSTIELKGDKLTERPEAEDSSEKPG-PSTQSSLDGHFKK--PNTSSLLVV 415
           I +N                       ++S++K G  S + S + H  +  P  S+   V
Sbjct: 280 ISKN-----------------------DESNQKSGLTSNEDSGEEHLARTEPVASTSACV 316

Query: 416 NRFSEPAKEKAEIIEGLKSQLNLVNSSMGAINTRPPFQIHQNS-VIRPGMNGFN------ 468
           N  S  A + A   E   +  N+    +G+    PP Q H +S  I   MNGF       
Sbjct: 317 NTNSVSATKLATKCE---NGANVSCDGVGSTGQTPPLQQHSHSREIHSNMNGFTALPNTI 373

Query: 469 ---------GTYGFNMPSQMGKLIGAAGPA-GFSFQSPQMVDRISRTDTNFVQPVTASSL 518
                    G         +G   G  G   GF    P + + I       V  V  +  
Sbjct: 374 SQYAGQGFLGQMQLTHAQVLGMFSGVNGRTNGFIHGHPLVANSIKAPQNGDVGKVATNP- 432

Query: 519 NSDDPKLDCSRSL-QNLESLGSAPSLPGNHQPTWQV------SPHPKPDLGL 563
            S D   D   +L Q + S  SAPSL    QP+  +      +P   PDL L
Sbjct: 433 -SPDAGHDSEAALSQTMTS--SAPSLSAGVQPSGSMPSEKLANPKKHPDLAL 481


>gi|414864607|tpg|DAA43164.1| TPA: hypothetical protein ZEAMMB73_037566 [Zea mays]
          Length = 609

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 188/585 (32%), Positives = 254/585 (43%), Gaps = 128/585 (21%)

Query: 39  RLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFL 98
           RL +  +Y   S     +D EELPDY ++I+HPMDF T+R KL N +Y+ LEQFE     
Sbjct: 132 RLQKKDTYGVFSE---PVDAEELPDYFDIIDHPMDFSTIREKLLNDSYSKLEQFE----- 183

Query: 99  ICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKP 158
                             ARSI  LAKK+FENLRQ SD+ EP+    RRGRPP     + 
Sbjct: 184 ------------------ARSIEALAKKDFENLRQPSDEEEPKPPA-RRGRPPKNPKTEG 224

Query: 159 LGRPSLERARSDFSSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLY 218
              P L   +++   D        +T   +R     TP  + S F D+   FS       
Sbjct: 225 DVSPDLSNVKANKPEDNVDTFRKRSTG--DRTRNTNTPMKDLSSFHDTFGSFSA------ 276

Query: 219 TGCLAENKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADK 278
                    +R D++    G S K GKK V LD++RR+TY Q +   R SS+    D ++
Sbjct: 277 ---------KRTDKIGDYSG-SSKWGKKPVSLDDDRRSTYDQHYS--RNSSLFAALDDER 324

Query: 279 KQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQ 338
           K L+ VG+   H Y RSLARFA+ LGPV W +AA RI R LP G  FGPGWVV+ +  PQ
Sbjct: 325 KLLVPVGVQQPHAYARSLARFASKLGPVGWDVAANRIRRALPPGTSFGPGWVVDGE-PPQ 383

Query: 339 RPLLLSSATVGLPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPGPSTQS 398
                 +A+     SS+P+  P N+ S         K D L           K GPS+  
Sbjct: 384 NSQWAPAASTN--PSSEPT-APPNMPS---------KNDVL---------DHKSGPSSNG 422

Query: 399 SLDG--HFKKPNTSSLLVVNRFSEPAKEKAEIIEGLKSQLNLVNSSMGAIN----TRPPF 452
            + G  H  +  T     V   S    + ++I   +    N V  S G  +      PP 
Sbjct: 423 DVTGEEHLTRTQT-----VASTSTSFDKSSDISSKVTKLENGVTESCGGTDNTGSAAPPM 477

Query: 453 QIHQNS-VIRPGMNGFN------------GTYGFNMPSQMGKLIGAAGPAGFSFQSPQMV 499
           Q H +S  I   +NGF             G +G  +     +++G      FS  + ++ 
Sbjct: 478 QQHSHSREIHSNINGFTAMSNAMSQYAGQGLFGSGIHMTHAQVLGM-----FSGMNGKVN 532

Query: 500 DRISRTDTNFVQPVTASSLNSDDPKLDCSRSLQN-LESLGSAPSLPGNHQPTWQVSPHPK 558
             I R       PVTA SL +     D  ++  N ++S G  P        T   S HP 
Sbjct: 533 GYIHR------HPVTADSLKTAGQNGDVGKATVNPVQSAGQDPKT-----ATENSSAHPG 581

Query: 559 PDLGLTPQQKPDAVPPDLNVRFRSPG-SPNSSRVDSTQPDLALQL 602
                            LN R +S G SP     +   PDLALQL
Sbjct: 582 -----------------LNSRAQSSGSSPRGKLTNPKHPDLALQL 609


>gi|414590128|tpg|DAA40699.1| TPA: hypothetical protein ZEAMMB73_000257 [Zea mays]
          Length = 536

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 105/248 (42%), Positives = 150/248 (60%), Gaps = 35/248 (14%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY ++++HPMDF T+R KL  GAY+ LEQFE DVFLI +NAM YN+PDTIY+R
Sbjct: 145 VDPEELPDYHDIVKHPMDFSTIRKKLDKGAYSNLEQFEDDVFLISTNAMCYNSPDTIYYR 204

Query: 116 QARSIHELAKKNFENLRQDSDDNE--------------PETKVVRRGRPPTK-NFKKPLG 160
           QAR I E+AKK+FENLRQDSD ++                    RRGRPP K N K+ +G
Sbjct: 205 QARGIQEIAKKDFENLRQDSDASDPEPEPELELEPEPEEPKPQPRRGRPPNKNNAKQKVG 264

Query: 161 RPSLERARSDFSSDVTLASGAE-------NTALTNRDLGNGTPHLEKSGFTDSSRRFSGS 213
           +P  ERA +DFS   TLA+ A        +  L+ R +      + ++ F  ++RR   +
Sbjct: 265 KPPTERATADFSG-ATLATAANIGRHAQADVDLSRRAMDKAMMDMLRASF--ANRRNEHN 321

Query: 214 WNDLYTGCLAENKLERNDEVSLSKG-YSMKHGKKQVVLDENRRNTY--KQFHQSLRESSV 270
           W+        E K ER +E S  +G +S K GK+ ++++++RR+TY   Q   S+ E  V
Sbjct: 322 WS-------GERKFERFEECSGYRGTWSAKMGKRPILMEDSRRSTYCETQPSNSIYELPV 374

Query: 271 LTTFDADK 278
            ++++  K
Sbjct: 375 SSSYNGTK 382


>gi|414590127|tpg|DAA40698.1| TPA: hypothetical protein ZEAMMB73_000257 [Zea mays]
          Length = 535

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 105/248 (42%), Positives = 150/248 (60%), Gaps = 35/248 (14%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY ++++HPMDF T+R KL  GAY+ LEQFE DVFLI +NAM YN+PDTIY+R
Sbjct: 144 VDPEELPDYHDIVKHPMDFSTIRKKLDKGAYSNLEQFEDDVFLISTNAMCYNSPDTIYYR 203

Query: 116 QARSIHELAKKNFENLRQDSDDNE--------------PETKVVRRGRPPTK-NFKKPLG 160
           QAR I E+AKK+FENLRQDSD ++                    RRGRPP K N K+ +G
Sbjct: 204 QARGIQEIAKKDFENLRQDSDASDPEPEPELELEPEPEEPKPQPRRGRPPNKNNAKQKVG 263

Query: 161 RPSLERARSDFSSDVTLASGAE-------NTALTNRDLGNGTPHLEKSGFTDSSRRFSGS 213
           +P  ERA +DFS   TLA+ A        +  L+ R +      + ++ F  ++RR   +
Sbjct: 264 KPPTERATADFSG-ATLATAANIGRHAQADVDLSRRAMDKAMMDMLRASF--ANRRNEHN 320

Query: 214 WNDLYTGCLAENKLERNDEVSLSKG-YSMKHGKKQVVLDENRRNTY--KQFHQSLRESSV 270
           W+        E K ER +E S  +G +S K GK+ ++++++RR+TY   Q   S+ E  V
Sbjct: 321 WS-------GERKFERFEECSGYRGTWSAKMGKRPILMEDSRRSTYCETQPSNSIYELPV 373

Query: 271 LTTFDADK 278
            ++++  K
Sbjct: 374 SSSYNGTK 381


>gi|168054173|ref|XP_001779507.1| single bromodomain-containing protein [Physcomitrella patens subsp.
           patens]
 gi|162669089|gb|EDQ55683.1| single bromodomain-containing protein [Physcomitrella patens subsp.
           patens]
          Length = 771

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 184/357 (51%), Gaps = 22/357 (6%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D + +PDY +VI+ PMDFGT+  K+A G+Y T   FEKD+ LIC+NAM+YN P+TIY++
Sbjct: 170 VDAKLVPDYYDVIKEPMDFGTMYKKIAKGSYYTKSLFEKDIMLICNNAMRYNGPETIYYK 229

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKV----VRRGRPPTKNFKKPLG-RPSLERARSD 170
           QARSI E A+K  + L   S   E  T       ++  PP K +K     +  L+ A SD
Sbjct: 230 QARSIQEAARKALDVLPSQSGAPEAGTAKPASHKKQPHPPKKGWKNTAAVKTLLQPANSD 289

Query: 171 FSSDVTLASGAENTALTNRD--LGN--GTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENK 226
           F+S  +LA+  ++ +   +    G+  G P  ++SG         G  +    G   +  
Sbjct: 290 FASGASLAAEGDDLSQPKKSDTFGSKKGAPS-DRSGSVAVDEPGWGVQSQASAGPEPDAD 348

Query: 227 LERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTF---DADKKQLMT 283
           +  +  + L K  ++K G+K +  DE  R+TYK   +SL        F     +   L+ 
Sbjct: 349 VLDDQGIQL-KPATLKDGRKPLSTDEYHRSTYKP--RSLPAHGRGPPFAGVGGELHHLVP 405

Query: 284 VGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLL 343
            G  SE  Y +SL+RF+A LGP  WK AA+R++R L   V FG GW+ E++  P      
Sbjct: 406 TGYQSEMAYAKSLSRFSAKLGPEGWKHAAQRLQRVLAPSVPFGLGWIGEHEAPPGTIFKR 465

Query: 344 SSATVGLPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEKPGPSTQSSL 400
            S+ V +   + P+ I +N++S S      L G   T  P    +S  P PST  SL
Sbjct: 466 YSSGVNV---ANPTRIDQNIASTSLR---RLPGVSSTSHPPVPTASFAPTPSTSRSL 516


>gi|238006660|gb|ACR34365.1| unknown [Zea mays]
 gi|414590126|tpg|DAA40697.1| TPA: hypothetical protein ZEAMMB73_000257 [Zea mays]
          Length = 347

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/205 (44%), Positives = 122/205 (59%), Gaps = 32/205 (15%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY ++++HPMDF T+R KL  GAY+ LEQFE DVFLI +NAM YN+PDTIY+R
Sbjct: 144 VDPEELPDYHDIVKHPMDFSTIRKKLDKGAYSNLEQFEDDVFLISTNAMCYNSPDTIYYR 203

Query: 116 QARSIHELAKKNFENLRQDSDDNE--------------PETKVVRRGRPPTK-NFKKPLG 160
           QAR I E+AKK+FENLRQDSD ++                    RRGRPP K N K+ +G
Sbjct: 204 QARGIQEIAKKDFENLRQDSDASDPEPEPELELEPEPEEPKPQPRRGRPPNKNNAKQKVG 263

Query: 161 RPSLERARSDFSSDVTLASGAE-------NTALTNRDLGNGTPHLEKSGFTDSSRRFSGS 213
           +P  ERA +DFS   TLA+ A        +  L+ R +      + ++ F  ++RR   +
Sbjct: 264 KPPTERATADFSG-ATLATAANIGRHAQADVDLSRRAMDKAMMDMLRASF--ANRRNEHN 320

Query: 214 WNDLYTGCLAENKLERNDEVSLSKG 238
           W+        E K ER +E S   G
Sbjct: 321 WS-------GERKFERFEECSGVHG 338


>gi|168049132|ref|XP_001777018.1| single bromodomain-containing protein [Physcomitrella patens subsp.
           patens]
 gi|162671583|gb|EDQ58132.1| single bromodomain-containing protein [Physcomitrella patens subsp.
           patens]
          Length = 572

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 150/294 (51%), Gaps = 18/294 (6%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D   +PDY +VI+ PMDFGT+  K++ G Y  L  FEKD+ LIC+NAM+YN P+T+Y++
Sbjct: 172 VDANLVPDYYDVIKEPMDFGTMYKKISKGLYNILSLFEKDIMLICNNAMRYNGPETVYYK 231

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKV----VRRGRPPTKNFKKPLG-RPSLERARSD 170
           QARSI + A+K  + +   +   E  T       ++  P  K +      + +LE A SD
Sbjct: 232 QARSIQDAARKALDVIASQAGSAEAGTAKPAAHKKQAHPSKKTWSNTAAPKTTLEPANSD 291

Query: 171 FSSDVTLASGAENTALTNR-DLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLER 229
           F+S  +LA  AE  A +N+ D        ++   +D S   +G          A    E 
Sbjct: 292 FASGASLA--AEGEAQSNKHDFVTS----KRGTQSDRSGSVAGEEPGYGVQSQATAAFEP 345

Query: 230 NDEVSLSKG-----YSMKHGKKQVVLDENRRNTYKQFHQSLR-ESSVLTTFDADKKQLMT 283
           + +V   +G      ++K G++    +E  R+TYK  + S             +   L+ 
Sbjct: 346 DADVQDEQGAQQKPVALKDGRRPSSTEEYHRSTYKPRNLSAHGRGPTFAGVGGELHHLVP 405

Query: 284 VGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAP 337
            G  SE  Y +SL+RF+A LGP  WK AA+R++R L   V FG GW+  ++  P
Sbjct: 406 TGYQSEMAYAKSLSRFSAKLGPEGWKFAAQRLQRVLAPSVPFGQGWIGVHEAPP 459


>gi|226492379|ref|NP_001141420.1| hypothetical protein [Zea mays]
 gi|194704528|gb|ACF86348.1| unknown [Zea mays]
 gi|413956935|gb|AFW89584.1| hypothetical protein ZEAMMB73_669630 [Zea mays]
          Length = 436

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/233 (42%), Positives = 134/233 (57%), Gaps = 25/233 (10%)

Query: 104 MQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPS 163
           M YN+ DTIYFRQARSI  LAKK+FENLRQ SD+ EP+    RRGRPP KN       P 
Sbjct: 1   MSYNSADTIYFRQARSIEALAKKDFENLRQPSDEEEPKPPA-RRGRPP-KN-------PK 51

Query: 164 LERARSDFSSDVT--LASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGC 221
           +E    D S D++    S  E++  T R    G    + +  T+++ +   S++ +    
Sbjct: 52  ME---GDASPDLSNMKTSKPEDSIDTFRKKSTG----DITRNTNTTMKEPSSFHSM---- 100

Query: 222 LAENKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQL 281
           L     +R D++    G S K GKK V +D++RR+TY Q +     SS+    D  +K L
Sbjct: 101 LGSFSAKRADKIGDYSGSS-KWGKKPVGVDDDRRSTYDQHYSC--NSSLFAALDDGRKLL 157

Query: 282 MTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVEND 334
           + VG+  +H Y RSLARFA+ LGPV W + A RI R LP G  FGPGWVV+ +
Sbjct: 158 VPVGVQQQHAYARSLARFASKLGPVGWDVTANRIRRALPPGTSFGPGWVVDGE 210


>gi|218199703|gb|EEC82130.1| hypothetical protein OsI_26165 [Oryza sativa Indica Group]
          Length = 1085

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/237 (39%), Positives = 121/237 (51%), Gaps = 33/237 (13%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY +VIEHPMDFGTVR KLA  AY + EQFE DVFLICSNAMQYNAPDTIYFR
Sbjct: 123 VDPEELPDYHDVIEHPMDFGTVRRKLARNAYRSFEQFEDDVFLICSNAMQYNAPDTIYFR 182

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSDV 175
           QA SIHELA+K F+ LR +    E   K  ++ RP   N ++P+ +P L  +      D+
Sbjct: 183 QAHSIHELARKKFQELRDEGIPTENLIKSEQKIRPHPSN-REPIKKPVLRYS----DDDL 237

Query: 176 TLASGAENTALTN-RDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDEVS 234
              S  E  +  N +DL             +  R+F             +  + RN E  
Sbjct: 238 GFMSHKEQVSRPNSKDL-------------EDDRKFKDQ---------VKKTISRNSEDV 275

Query: 235 LSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVGLHSEHG 291
           LS  +  +  KK  V     RN+      S ++  V      +    ++   H E G
Sbjct: 276 LSSSFQKERVKKSSV-----RNSDDDLSSSFQKEQVKRPISRNSGDDISSSFHKEQG 327



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 16/195 (8%)

Query: 153 KNFKKPLGRPSLERARSDFSSDVTLASGAENTALTNRDLGNGTPH--LEKSGFTDSSRRF 210
           +  KKP+   S +   SD S+    ++G ++  L+        P   +  +GF D     
Sbjct: 446 ETVKKPVRMNSQDALGSDVSAATIASAGDDSNGLSMSQANAVEPQDCIAANGFMDKD--- 502

Query: 211 SGSWNDLYTGCLAENKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQ--SLRES 268
                   +  L E + E+ D++S ++  S+K   K +V+DE RR TY  + +  S    
Sbjct: 503 -------ISSPLDEIRSEKPDDIS-ARESSVKPSYKSIVVDETRRKTYDTYEEQPSSESD 554

Query: 269 SVLTTFDADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPG 328
           ++   F  + K+L+ VG HSEH Y RSLARFA +LG   W++A+ RI+R LP  V+FG G
Sbjct: 555 TIFDVFCEEPKELVNVGPHSEHSYARSLARFAGSLGTQGWRLASERIQRVLPTDVKFGRG 614

Query: 329 WVVENDLAPQRPLLL 343
           WV E +  P  P+L 
Sbjct: 615 WVGEYE-PPLPPILF 628



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 18/64 (28%)

Query: 548  QPTWQVSPHPKPDLGLTP--QQKP--DAVPPDLNVRFRSPGSPNSSR-----VDSTQPDL 598
            QP WQ         GL P  QQKP  D + PDLN+ F SPGSP + +     +++ QPDL
Sbjct: 1031 QPQWQ---------GLVPPMQQKPNKDMLRPDLNIGFPSPGSPPARQSSGINLEAQQPDL 1081

Query: 599  ALQL 602
            ALQL
Sbjct: 1082 ALQL 1085


>gi|10177378|dbj|BAB10577.1| unnamed protein product [Arabidopsis thaliana]
          Length = 639

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/230 (40%), Positives = 125/230 (54%), Gaps = 18/230 (7%)

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGRPPT---KNFKKPLGRPSLERARSDFSSDVTLAS 179
           + K+ FE  R      E E K   + +P +   K  ++P  R  LE   SDFSS   LAS
Sbjct: 1   MGKRKFEKARLKIKRAEKELKTDEKVKPDSSVKKQVRQPFSRNGLEAVGSDFSSGANLAS 60

Query: 180 GAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLA-ENKLERNDEVSLSKG 238
           G    A  N  +       EK  +TD           L+ G  +  + LE+ +++S  KG
Sbjct: 61  GG---ASQNEPVSTQIGGHEKHSYTDV----------LFEGNTSLVDSLEKAEDLSSGKG 107

Query: 239 YSMKHGKKQVVLDENRRNTYKQF-HQSLRESSVLTTFDADKKQLMTVGLHSEHGYTRSLA 297
              K G+K  V++E+RR TY+    Q  R  S+ TTF+++ KQ + VGLH+EH Y RSLA
Sbjct: 108 LFGKCGRKLSVVEEDRRATYEDSDQQGDRSESIFTTFESEIKQFVAVGLHAEHAYGRSLA 167

Query: 298 RFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLSSAT 347
           RFAA LGPVAWKIA++RIE+ LPA  +FG GWV E +  P   LL  + T
Sbjct: 168 RFAATLGPVAWKIASQRIEQALPADFKFGRGWVGEYEPLPTPVLLFETCT 217



 Score = 42.4 bits (98), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 10/51 (19%)

Query: 562 GLTPQ------QKPDAVPPDLNVRFRSPGSP----NSSRVDSTQPDLALQL 602
           G+TPQ      Q+   +PPDLN+   SP SP    +  RVDS QPDLALQL
Sbjct: 589 GITPQVQLKQRQENFNLPPDLNIGVHSPDSPAKQSSGVRVDSQQPDLALQL 639


>gi|414886862|tpg|DAA62876.1| TPA: hypothetical protein ZEAMMB73_999770 [Zea mays]
          Length = 1278

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/112 (63%), Positives = 81/112 (72%), Gaps = 9/112 (8%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY +VIEHPMDFGTVR KLA  AY + EQFE DVFLICSNAMQYNAPDTIYFR
Sbjct: 239 VDPEELPDYHDVIEHPMDFGTVRKKLARNAYRSFEQFEDDVFLICSNAMQYNAPDTIYFR 298

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNF------KKPLGR 161
           QA SI ELA+K F+ LR +    E   K+ ++ RP   NF      KKP+ R
Sbjct: 299 QAHSIQELARKKFQELRDEGIPTENPIKIGQKIRP---NFCTGALVKKPVLR 347



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 10/115 (8%)

Query: 222 LAENKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQS--LRESSVLTTFDADKK 279
           L E + E+ D++     Y      K +V+DE RR TY    +   ++   V   F A+ K
Sbjct: 620 LDEIRSEKTDDILAKPSY------KPIVVDETRRKTYDASEEQPLMKSDPVFDVFSAEPK 673

Query: 280 QLMTVGLHSEH--GYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVE 332
           +L+ VGL +EH   Y RSLARFA +LG   W+IA+ RI + LPA V +G GWV E
Sbjct: 674 ELVNVGLDAEHSYAYVRSLARFAGSLGTQGWRIASDRIRQALPADVNYGRGWVGE 728



 Score = 43.1 bits (100), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 18/64 (28%)

Query: 548  QPTWQVSPHPKPDLGLTP--QQKP--DAVPPDLNVRFRSPGSPNSSR-----VDSTQPDL 598
            QP WQ         GL P  QQKP  D + PDLN+ F SPGSP + +     +++ QPDL
Sbjct: 1224 QPQWQ---------GLFPHMQQKPGKDVLRPDLNIGFPSPGSPPARQSSGINLEAQQPDL 1274

Query: 599  ALQL 602
            ALQL
Sbjct: 1275 ALQL 1278


>gi|297737450|emb|CBI26651.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/246 (36%), Positives = 134/246 (54%), Gaps = 21/246 (8%)

Query: 153 KNFKKPLGRPSLERARSDFSSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSG 212
           K  KKP+ R + E   SDFSS  TLA        T  D+ NG  +  ++G  +      G
Sbjct: 9   KQIKKPIFRTAQEPVGSDFSSGATLA--------TMGDVQNGF-NATQAGGCERPSNVDG 59

Query: 213 SWNDLYTGCLAENKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRES-SVL 271
              +     + +N LE+ +E+   KG   K G+K  V+DENRR TY   +Q +  S ++ 
Sbjct: 60  LIIESNPSQI-DNNLEKAEELFSGKGLLSKFGRKPFVVDENRRATYSISNQPIVGSETIF 118

Query: 272 TTFDADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVV 331
            TF+A+ KQL+ VGLH++H Y RSLARFAA LGPVAWK+A++RIE+ LP G +FG GWV 
Sbjct: 119 NTFEAEAKQLVAVGLHADHSYARSLARFAATLGPVAWKVASQRIEQALPVGSKFGRGWVG 178

Query: 332 ENDLAPQRPLLLSSATVGLPSSSQPSLIPENLSSASTHSTIELKGDKLTERPEAEDSSEK 391
           E +  P   L+L +         +P L+P+       H+ +  K +K+++ P        
Sbjct: 179 EFEPLPTPVLMLETRI-----QKEPFLVPK-----LQHNAVLRKDEKISKPPVPAKEHSV 228

Query: 392 PGPSTQ 397
            GP+ +
Sbjct: 229 SGPTLE 234



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 8/52 (15%)

Query: 559 PDLGLTPQQKP----DAVPPDLNVRFRSPGSP----NSSRVDSTQPDLALQL 602
           P  GL P  +P    + +PPDLN+ F+  GSP    +   VDS QPDLALQL
Sbjct: 356 PWQGLNPNTQPRHRQETLPPDLNIGFQPSGSPVRQSSGVLVDSQQPDLALQL 407


>gi|297737451|emb|CBI26652.3| unnamed protein product [Vitis vinifera]
          Length = 286

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 72/91 (79%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY +VIEHPMDF TVR KL NG+Y T E+FE DVFLIC+NAMQYNAPDTIY +
Sbjct: 188 VDPEELPDYHDVIEHPMDFATVRKKLGNGSYRTFEEFESDVFLICTNAMQYNAPDTIYHK 247

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVR 146
           QAR+I ELA+K F+ LR D   +E E K  R
Sbjct: 248 QARAIQELARKKFQKLRIDIGRSEKELKSER 278


>gi|224140639|ref|XP_002323689.1| bromodomain protein [Populus trichocarpa]
 gi|222868319|gb|EEF05450.1| bromodomain protein [Populus trichocarpa]
          Length = 770

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 162/322 (50%), Gaps = 38/322 (11%)

Query: 54  FKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
           + +  +++ +Y E+I+ PMDFGT+R KL  G Y +LEQFE DVFLI  NAM +N+  TIY
Sbjct: 202 YGITADKVEEYYEIIKEPMDFGTMRAKLHEGMYKSLEQFEHDVFLISGNAMHFNSSSTIY 261

Query: 114 FRQARSIHELAKKNFENLRQDSDDNEPETKVVRR--GRPPTKNFKKPLGRPSLERARSDF 171
           FRQAR+I ELAKK F  LR D ++ E E    RR  GR           RP  E   S++
Sbjct: 262 FRQARAIDELAKKVFHVLRTDPENFELEFLGTRRRNGR-----------RPQHEAKGSNY 310

Query: 172 SSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLA--ENKLER 229
           SS   +A+ ++++          TP L  +  + S +R       L +GCL    +    
Sbjct: 311 SSSPKVATSSKSSNTAVHVSPKPTPCL--TSCSSSLKRAI----QLNSGCLGITTHSDAT 364

Query: 230 NDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLT-TFDADKKQLMTVGLHS 288
           +D V    G S     K+   + +RR+TYK +   L E+  +T +  ++ K L+ V    
Sbjct: 365 DDRVFFGSGVS-----KRSSDETDRRSTYKPWMSFLNENHPITSSIYSNSKPLVHVN-QQ 418

Query: 289 EHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFG-PG---WVVENDLAPQRPLLLS 344
           +  Y++SL  F  +LGP A  +A R++   L     F  PG   W+     AP      +
Sbjct: 419 DTSYSKSLLLFVKDLGPTAQMVARRKLNGWLNTAANFSTPGSNFWL----QAPNCQNFAA 474

Query: 345 SATVGLPSS--SQPSLIPENLS 364
           SA+   P +  + PS   +N+S
Sbjct: 475 SASAQYPPTFDAPPSAACQNIS 496


>gi|242045782|ref|XP_002460762.1| hypothetical protein SORBIDRAFT_02g034450 [Sorghum bicolor]
 gi|241924139|gb|EER97283.1| hypothetical protein SORBIDRAFT_02g034450 [Sorghum bicolor]
          Length = 1298

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/131 (53%), Positives = 81/131 (61%), Gaps = 28/131 (21%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEK-------------------DV 96
           +DPEELPDY +VIEHPMDFGTVR KLA  AY + EQFE                    DV
Sbjct: 240 VDPEELPDYHDVIEHPMDFGTVRKKLARNAYRSFEQFEAMGYTGSIGGLESLTMSHQDDV 299

Query: 97  FLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNF- 155
           FLICSNAMQYNAPDTIYFRQA SI ELA+K F+ LR +    E   K+ ++ R   +NF 
Sbjct: 300 FLICSNAMQYNAPDTIYFRQAHSIQELARKKFQELRDEGIPTENPIKIEQKIR---QNFC 356

Query: 156 -----KKPLGR 161
                KKP+ R
Sbjct: 357 SADLVKKPVLR 367



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 86/163 (52%), Gaps = 14/163 (8%)

Query: 178 ASGAENTALTNRDLGNGTPHLEKSGFTDS----SRRFSGSWNDLYTGCLAENKLERNDEV 233
           A G++ +A T   +G+G+  L  S    +    S   +G  +   +  L E + E+ D++
Sbjct: 593 AQGSDISAATIASVGDGSNGLSMSQPNATEPTGSTLANGVIDKDTSSPLDEIRSEKTDDI 652

Query: 234 SLSKGYSMKHGKKQVVLDENRRNTYKQFHQS--LRESSVLTTFDADKKQLMTVGLHSEH- 290
           S    Y      K +V+DE RR TY    +   +    V   F A+ K+L+ VGL +EH 
Sbjct: 653 SAKPSY------KPIVVDETRRKTYDASEEQPPMESDPVFDVFSAEPKELVNVGLDAEHS 706

Query: 291 -GYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVE 332
             Y RSLARFA +LG   W+IA+ RI + LPA V++G GWV E
Sbjct: 707 YAYARSLARFAGSLGAQGWRIASDRIRQALPADVKYGRGWVGE 749



 Score = 43.1 bits (100), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 15/61 (24%)

Query: 548  QPTWQVSPHPKPDLGLTPQ-QKPDAVPPDLNVRFRSPGSPNSSR-----VDSTQPDLALQ 601
            QP WQ         GL P  Q+ D + PDLN+ F SPGSP + +     +++ QPDLALQ
Sbjct: 1247 QPQWQ---------GLVPHMQQKDVLRPDLNIGFPSPGSPPARQSSGINLEAQQPDLALQ 1297

Query: 602  L 602
            L
Sbjct: 1298 L 1298


>gi|224069086|ref|XP_002326271.1| bromodomain protein [Populus trichocarpa]
 gi|222833464|gb|EEE71941.1| bromodomain protein [Populus trichocarpa]
          Length = 762

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/266 (37%), Positives = 140/266 (52%), Gaps = 21/266 (7%)

Query: 54  FKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
           + +   ++ +Y E+I+ PMDFGT+R KL  G Y +LEQFE DVFLI  NAM +N+  TIY
Sbjct: 195 YGIAANKVEEYYEIIQEPMDFGTMRAKLHEGMYKSLEQFEHDVFLISGNAMHFNSSSTIY 254

Query: 114 FRQARSIHELAKKNFENLRQDSDDNEPE--TKVVRRGRPPTKNFKKPLGRPSLERARSDF 171
           FRQAR+I ELAKK F  L+ D D+ E E      R GR P    K     PSL+ ARS  
Sbjct: 255 FRQARAIAELAKKVFHVLKTDPDNFELEFSGTRRRSGRRPQHEVKGSTYSPSLKVARSSK 314

Query: 172 SSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERND 231
           SS+        NTA+        TP L       SS + +   N    G +  +   R+D
Sbjct: 315 SSNT-------NTAVHVSP--KPTPCLTS---CSSSLKRAIRVNSACLG-ITTHSDARDD 361

Query: 232 EVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESS-VLTTFDADKKQLMTVGLHSEH 290
           EV    G     GK+    + +RR+TYK +   L ES  ++++  ++ K L+ V    E 
Sbjct: 362 EVLFGSG----DGKRFGFSETDRRSTYKPWMSFLDESYPIISSIYSNSKPLVHVN-QQEI 416

Query: 291 GYTRSLARFAANLGPVAWKIAARRIE 316
            Y +SL  F  ++GP A  +A R+++
Sbjct: 417 AYHKSLFLFVKDVGPTAQMVAKRKLD 442


>gi|414590391|tpg|DAA40962.1| TPA: hypothetical protein ZEAMMB73_887485 [Zea mays]
          Length = 1309

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/127 (53%), Positives = 78/127 (61%), Gaps = 21/127 (16%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEK------------------DVF 97
           +DPEELPDY +VIEHPMDF TVR KLA  AY + EQFE                   DVF
Sbjct: 242 VDPEELPDYHDVIEHPMDFSTVRKKLARNAYRSFEQFESMGYTGSIGLESLTMSHLDDVF 301

Query: 98  LICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRGRP---PTKN 154
           LICSNAMQYNAPDTIYFRQA SI ELA+K F+ LR +    E   K  ++ RP     + 
Sbjct: 302 LICSNAMQYNAPDTIYFRQAHSIQELARKKFQELRDEGIPTENPIKSEQKSRPNFCSGEQ 361

Query: 155 FKKPLGR 161
            KKP+ R
Sbjct: 362 VKKPVLR 368



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 23/178 (12%)

Query: 178 ASGAENTALTNRDLGNGTPHL--------EKSGFTDSSRRFSGSWNDLYTGCLAENKLER 229
           A G++ +A T   +G+G+  L        E +G T ++    G  +   +  L E + E+
Sbjct: 600 AQGSDISAATIASVGDGSNGLSMPQPNNSEPTGCTVAN----GVIDKDISSPLDEIRSEK 655

Query: 230 NDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFH-QSLRESS-VLTTFDADKKQLMTVGLH 287
            D++     Y      K +V+DENRR TY     QS  ES  V   F A+ K+L+ VGL 
Sbjct: 656 TDDILAKPSY------KTIVVDENRRKTYDASEGQSPMESDPVFDVFSAEPKELVNVGLD 709

Query: 288 SEH--GYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLL 343
           +EH   Y RSLARFA + G   W+IA+ RI + LPA V++G GWV E +  P  P+L+
Sbjct: 710 AEHSYAYARSLARFAGSFGAQGWRIASDRIRQALPADVKYGRGWVGEYE-PPLLPILV 766



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 18/64 (28%)

Query: 548  QPTWQVSPHPKPDLGLTP--QQKP--DAVPPDLNVRFRSPGSPNSSR-----VDSTQPDL 598
            QP WQ         GL P  QQKP  D + PDLN+ F SP SP + +     +++ QPDL
Sbjct: 1255 QPQWQ---------GLVPHMQQKPGKDVLRPDLNIGFPSPRSPPARQSSGINLEAQQPDL 1305

Query: 599  ALQL 602
            ALQL
Sbjct: 1306 ALQL 1309


>gi|222637123|gb|EEE67255.1| hypothetical protein OsJ_24415 [Oryza sativa Japonica Group]
          Length = 1210

 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 117/238 (49%), Gaps = 34/238 (14%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDV-FLICSNAMQYNAPDTIYF 114
           +DPEELPDY +VIEHPMDFGTVR KLA  AY + EQFE  +   I +NAMQYNAPDTIYF
Sbjct: 288 VDPEELPDYHDVIEHPMDFGTVRRKLARNAYRSFEQFELVIPSHISNNAMQYNAPDTIYF 347

Query: 115 RQARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSD 174
           RQA SIHELA+K F+ LR +    E   K  ++ RP   N ++P+ +P L  +      D
Sbjct: 348 RQAHSIHELARKKFQELRDEGIPTENLIKSEQKIRPHPSN-REPIKKPVLRYS----DDD 402

Query: 175 VTLASGAENTALTN-RDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDEV 233
           +   S  E  +  N +DL             +  R+F             +  + RN E 
Sbjct: 403 LGFMSHKEQVSRPNSKDL-------------EDDRKFKDQ---------VKKTISRNSED 440

Query: 234 SLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVGLHSEHG 291
            LS  +  +  KK  V     RN+      S ++  V      +    ++   H E G
Sbjct: 441 VLSSSFQKERVKKSSV-----RNSDDDLSSSFQKEQVKRPISRNSGDDISSSFHKEQG 493



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 18/64 (28%)

Query: 548  QPTWQVSPHPKPDLGLTP--QQKP--DAVPPDLNVRFRSPGSPNSSR-----VDSTQPDL 598
            QP WQ         GL P  QQKP  D + PDLN+ F SPGSP + +     +++ QPDL
Sbjct: 1156 QPQWQ---------GLVPPMQQKPNKDMLRPDLNIGFPSPGSPPARQSSGINLEAQQPDL 1206

Query: 599  ALQL 602
            ALQL
Sbjct: 1207 ALQL 1210


>gi|147839698|emb|CAN66033.1| hypothetical protein VITISV_026942 [Vitis vinifera]
          Length = 974

 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 139/271 (51%), Gaps = 33/271 (12%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D +E+  Y +VI+ PMDFGT+R KL  G Y TLEQFE DVF I SNAM +N+  T+YFR
Sbjct: 108 VDADEVEGYYDVIKEPMDFGTMRAKLQEGMYKTLEQFEHDVFQISSNAMLFNSSTTVYFR 167

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERAR--SDFSS 173
           QAR++ ELA+K F+ L+   +  E E   +RR RP     +KP G  S+   +  S+  S
Sbjct: 168 QARALRELAQKVFDALKTHPETLELEFSQIRR-RPG----RKPQGEGSVSHTKLASNLKS 222

Query: 174 -DVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDE 232
             + ++S     +L    +   T       +  +SR  S              + ++ D+
Sbjct: 223 IGIGVSSNGRTCSLNGPSIRRNT-----QAYLAASRSIS--------------RADQKDK 263

Query: 233 VSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVL-TTFDADKKQLMTVGLHSEHG 291
             LS     + G+    ++  RR TY+ +     E+ +L +    + KQL+ V  + + G
Sbjct: 264 AILS---GSRGGRNLNQMETERRRTYRPWSTFASENDLLISAVYNESKQLIQV-RNGDGG 319

Query: 292 YTRSLARFAANLGPVAWKIAARRIERCLPAG 322
           Y  SL RF  ++GP A  +A R++  C P G
Sbjct: 320 YKESLMRFLKDMGPTAQMVANRKMANC-PTG 349


>gi|302813973|ref|XP_002988671.1| hypothetical protein SELMODRAFT_427358 [Selaginella moellendorffii]
 gi|300143492|gb|EFJ10182.1| hypothetical protein SELMODRAFT_427358 [Selaginella moellendorffii]
          Length = 995

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 166/384 (43%), Gaps = 84/384 (21%)

Query: 21  VRIQQITTKGLSWNWDP---------QRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHP 71
           VR     T GL  N  P         +R  +  +Y   +     +DPEE+PDY ++I+ P
Sbjct: 367 VRFVPTPTSGLLENGSPPHRVLEELLERFQKKDTYGVFAE---PVDPEEIPDYLDIIKEP 423

Query: 72  MDFGTVRNKLANGAYATLEQFEKDVFLICS--NAMQYNAPDTIYFRQARSIHELAKKNFE 129
           MDF T++ KL+ GAY ++E FE+   +  S  N +Q    D    +QA++I ++A+K F+
Sbjct: 424 MDFSTIKKKLSKGAYGSIELFEQRYEIQRSENNLLQTVCTDN---KQAKAIKDIARKAFD 480

Query: 130 NLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSDVTLASG-AENTALTN 188
            L+   +         R+G  P K  K  L R +  R      SDVT  +G A+    + 
Sbjct: 481 VLKGRLNGQ-------RKG--PGKQSK--LKRCTTRRFSEQQGSDVTPGAGLADGKKAST 529

Query: 189 RDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDEVSLSKGYSMKHGKKQV 248
            D      H   S F  S+  F                     E SLSK  S+K G++ +
Sbjct: 530 IDRVADLSHKSNSPFQSSANDFE------------------FPEGSLSKAASLKDGRRLL 571

Query: 249 VLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVGLHSEHGYTRSLARFAANLGPVAW 308
            +DENRR+TY+               DA   Q++  G+     Y +SLA F AN    AW
Sbjct: 572 TVDENRRHTYR---------PPEPFEDAVVAQIVPSGVQYGGSYAQSLALFGANFKRPAW 622

Query: 309 KIAARRIERCLPAGVRFGPGWVVENDLAPQRPLLLSSATVGLPSSSQPSLIPENLSSAST 368
              AR+I + L   V FGPGWV E++                  SS+P  I         
Sbjct: 623 DFVARKIRKVLAPNVPFGPGWVGEHE-----------------KSSRPDCI--------- 656

Query: 369 HSTIELKGDKLTERPEAEDSSEKP 392
               E    ++  R EA+DSS++P
Sbjct: 657 --RTEPAAQQILPRDEAKDSSQQP 678


>gi|357512687|ref|XP_003626632.1| Bromodomain-containing protein [Medicago truncatula]
 gi|140046893|gb|ABO79399.1| Bromodomain [Medicago truncatula]
 gi|355520654|gb|AET01108.1| Bromodomain-containing protein [Medicago truncatula]
          Length = 524

 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 137/286 (47%), Gaps = 47/286 (16%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFE----------KDVFLICSNAMQ 105
           +DP E+ +Y  +++ PMDFGT+R KL  G Y TL+QFE           DVFLI +NAM 
Sbjct: 102 VDPNEVENYYTIVKQPMDFGTMRAKLHEGMYKTLQQFEVEVYKHWSCNHDVFLIFNNAMN 161

Query: 106 YNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRR--GRPPTKNFKKPLGRPS 163
           +N P TIYF+QAR I ELAKK F+ LR D +  E E    R+  G+   ++F       S
Sbjct: 162 FNPPGTIYFKQARVIGELAKKVFDVLRTDPEKFEIEFSETRQQVGKKNQRDFTDSTHVKS 221

Query: 164 LERARSDFSSDVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLA 223
            +      S +V+ +S               +  + K+ F D+S+       +++TG   
Sbjct: 222 NKTIIEVPSHNVSCSSHV-----------TSSRKIAKTSFHDTSKHDHARDVEVHTG--- 267

Query: 224 ENKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMT 283
                 N ++ +    ++           +R  TY++F+   R+  +++T   D+ +L+ 
Sbjct: 268 ------NKDIHICTSVAV-----------DRHCTYRRFY---RDEPIVSTIYDDRLKLLE 307

Query: 284 VGLHSEHGYTRSLARFAANLGPVAWKIAARRIERC-LPAGVRFGPG 328
                ++GY  SL  F  +LGP A  IA R++  C +     F P 
Sbjct: 308 HVSQQDNGYKDSLMLFVKDLGPTAQNIAKRKLLGCEIRTASAFSPA 353


>gi|302809412|ref|XP_002986399.1| hypothetical protein SELMODRAFT_425302 [Selaginella moellendorffii]
 gi|300145935|gb|EFJ12608.1| hypothetical protein SELMODRAFT_425302 [Selaginella moellendorffii]
          Length = 971

 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 149/326 (45%), Gaps = 56/326 (17%)

Query: 21  VRIQQITTKGLSWNWDP---------QRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHP 71
           VR     T GL  N  P         +R  +  +Y   +     +DPEE+PDY ++I+ P
Sbjct: 369 VRFVPTPTSGLLENGSPPHRVLEELLERFQKKDTYGVFAE---PVDPEEIPDYLDIIKEP 425

Query: 72  MDFGTVRNKLANGAYATLEQFEKDVFLICS--NAMQYNAPDTIYFRQARSIHELAKKNFE 129
           MDF T++ KL+ GAY ++E FE+   +  S  N +Q    D    +QA++I ++A+K F+
Sbjct: 426 MDFSTIKKKLSKGAYGSIELFEQRYEIQRSENNLLQTVCTDN---KQAKAIKDIARKAFD 482

Query: 130 NLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSDVTLASG-AENTALTN 188
            L+   + +       R+G  P K  K  L R +  R      +DVT  +G A+    + 
Sbjct: 483 VLKGRLNGH-------RKG--PGKQSK--LKRCTTRRFSEQQGTDVTPGAGLADGKKAST 531

Query: 189 RDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDEVSLSKGYSMKHGKKQV 248
            D      H   S F  S+  F                     E SLSK  S+K G++ +
Sbjct: 532 IDRVADLSHKSNSPFQSSANDFE------------------FPEGSLSKAASLKDGRRLL 573

Query: 249 VLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVGLHSEHGYTRSLARFAANLGPVAW 308
            +DENRR+TY+               DA   Q++  G+     Y +SLA F AN    AW
Sbjct: 574 TVDENRRHTYR---------PPEPFEDAVVAQIVPSGVQYGGSYAQSLALFGANFKRPAW 624

Query: 309 KIAARRIERCLPAGVRFGPGWVVEND 334
              AR+I + L   V FGPGWV E++
Sbjct: 625 DFVARKIRKVLAPNVPFGPGWVGEHE 650


>gi|255582032|ref|XP_002531813.1| bromodomain-containing protein [Ricinus communis]
 gi|223528547|gb|EEF30570.1| bromodomain-containing protein [Ricinus communis]
          Length = 707

 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/284 (34%), Positives = 143/284 (50%), Gaps = 34/284 (11%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++ E + DY E+I+ PMDFGT+R KL  G Y +LEQFE DVFLI  NAM +N+  TIYFR
Sbjct: 155 VNQEVVEDYYEIIKEPMDFGTMRAKLHEGMYNSLEQFEHDVFLISRNAMHFNSSSTIYFR 214

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSDV 175
           QAR+I ELAKK F  L+ D ++ E E    R         ++   RP  E   S  SS  
Sbjct: 215 QARAIDELAKKVFHVLKTDPENFEFEFSGTR---------RRTSRRPKCEAKSSACSSSS 265

Query: 176 TLASGAENTALTNRDLGNGTPHLEKSGFTDSSR------RFSGSWNDLYTGCLAENKLER 229
            L + + NT + N  +   T     S  T+         R SGS      G   +++L R
Sbjct: 266 KLITNS-NTGMLN--VSRTTVLSSASSITNLRTAMRLIPRCSGS------GLTTQSEL-R 315

Query: 230 NDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQS-LRESSVLTTFDADKKQLMTVGLHS 288
           ++EV     +    G+     + +RR+TY+    S L  SS+++T  ++ K LM +    
Sbjct: 316 DEEVP----FGGGDGRGSSSSEADRRSTYRSSSLSVLNGSSIVSTIYSNSKLLMHMD-QQ 370

Query: 289 EHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRF---GPGW 329
           ++ Y +SL  F  +LGP A  IA R++    P    +   G  W
Sbjct: 371 DNSYRQSLMLFVKDLGPTAQMIAKRKLNGWSPEAANYLNSGSNW 414


>gi|414864608|tpg|DAA43165.1| TPA: hypothetical protein ZEAMMB73_037566 [Zea mays]
          Length = 349

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/231 (35%), Positives = 113/231 (48%), Gaps = 44/231 (19%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D EELPDY ++I+HPMDF T+R KL N +Y+ LEQFE                      
Sbjct: 146 VDAEELPDYFDIIDHPMDFSTIREKLLNDSYSKLEQFE---------------------- 183

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSDV 175
            ARSI  LAKK+FENLRQ SD+ EP+    RRGRPP     +    P L   +++   D 
Sbjct: 184 -ARSIEALAKKDFENLRQPSDEEEPKP-PARRGRPPKNPKTEGDVSPDLSNVKANKPEDN 241

Query: 176 TLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDEVSL 235
                  +T   +R     TP  + S F D+   FS                +R D++  
Sbjct: 242 VDTFRKRSTG--DRTRNTNTPMKDLSSFHDTFGSFSA---------------KRTDKIGD 284

Query: 236 SKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESSVLTTFDADKKQLMTVGL 286
             G S K GKK V LD++RR+TY Q +   R SS+    D ++K L+ V +
Sbjct: 285 YSG-SSKWGKKPVSLDDDRRSTYDQHYS--RNSSLFAALDDERKLLVPVSI 332


>gi|296085827|emb|CBI31151.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/86 (59%), Positives = 63/86 (73%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEE+ DY E+I+ PMDFGT+R KL  G Y  LEQFE DVFLI SNAM +N+  TIYFR
Sbjct: 50  VDPEEVEDYYEIIKEPMDFGTMRAKLHEGMYKNLEQFEHDVFLISSNAMHFNSSATIYFR 109

Query: 116 QARSIHELAKKNFENLRQDSDDNEPE 141
           QAR++ EL+KK F  L+ D  + E E
Sbjct: 110 QARALQELSKKVFHVLKTDPRNFELE 135


>gi|357122667|ref|XP_003563036.1| PREDICTED: uncharacterized protein LOC100826422 [Brachypodium
           distachyon]
          Length = 970

 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 54/100 (54%), Positives = 69/100 (69%), Gaps = 1/100 (1%)

Query: 72  MDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENL 131
           MDFGTV+ KLA  AY + EQFE DVFLICSNAM YNAPDTIYFRQA SI ELA+K F+ L
Sbjct: 1   MDFGTVKRKLARNAYRSFEQFEDDVFLICSNAMLYNAPDTIYFRQAHSIQELARKKFQEL 60

Query: 132 RQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDF 171
           R +    E + K  ++ +P + N ++P+ +P L  +  D 
Sbjct: 61  RDEGIPTENQIKGEQKVKPNSCN-REPIKKPVLMYSEDDL 99



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 9/203 (4%)

Query: 148 GRPPTKNFKKPLGRPSLERARSDF----SSDVTLASGAENTALTNRDLGNGTPHLEKSGF 203
           G+P  ++ ++ LG  S E          S D    + +  T  +  D  NG    + +G 
Sbjct: 310 GQPICRDGREDLGYSSCEETVKKLVCMNSQDALCPNVSPATVASAGDGSNGLSMPQANGA 369

Query: 204 TDSSRRFSGSWNDLYTGCLA-ENKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFH 262
                  +  ++D  T   A E + E+ D+ S ++ YS K   K  V+DE RR TY    
Sbjct: 370 EPPDCTVADGFSDKDTSSPADEVRSEKTDDTS-ARDYSAKPSHKSFVVDETRRKTYHASE 428

Query: 263 QSLRESS--VLTTFDADKKQLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLP 320
           +     S  +     A+ ++L++VGLH+EH Y RSLARFA +LG   W+IA+ RI++ LP
Sbjct: 429 EQPSSDSDPIFDVLCAEPRELISVGLHAEHSYARSLARFAGSLGARGWRIASERIQQTLP 488

Query: 321 AGVRFGPGWVVENDLAPQRPLLL 343
           A V+FG GWV E + AP  P+L+
Sbjct: 489 AEVKFGRGWVGEYE-APLPPILV 510



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 18/64 (28%)

Query: 548 QPTWQVSPHPKPDLGLTP--QQK--PDAVPPDLNVRFRSPGSPNSSR-----VDSTQPDL 598
           QP WQ         GL P  QQK   D + PDLN+ F SPGSP + +     +++ QPDL
Sbjct: 916 QPQWQ---------GLVPHMQQKTNKDVLRPDLNIGFPSPGSPPARQTSGINLEAQQPDL 966

Query: 599 ALQL 602
           ALQL
Sbjct: 967 ALQL 970


>gi|10177379|dbj|BAB10578.1| unnamed protein product [Arabidopsis thaliana]
          Length = 145

 Score =  107 bits (268), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/65 (67%), Positives = 55/65 (84%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEELPDY ++IEHPMDF TVR KLANG+Y+TLE+ E DV LICSNAMQYN+ DT+Y++
Sbjct: 71  VDPEELPDYHDMIEHPMDFSTVRKKLANGSYSTLEELESDVLLICSNAMQYNSSDTVYYK 130

Query: 116 QARSI 120
           Q   +
Sbjct: 131 QVNHV 135


>gi|326515964|dbj|BAJ88005.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 954

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/100 (52%), Positives = 65/100 (65%), Gaps = 1/100 (1%)

Query: 72  MDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENL 131
           MDFGTV+ KLA   Y + EQFE DVFLICSNAM YNAPDT+YFRQA SI ELA+K F+ L
Sbjct: 1   MDFGTVKRKLARNVYRSFEQFEDDVFLICSNAMVYNAPDTVYFRQAHSIQELARKKFQEL 60

Query: 132 RQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDF 171
           R +    E + K  ++  P   N + P+ +P L  +  D 
Sbjct: 61  RDEGIPTENQVKSEQKVGPIPCN-RGPIKKPVLRYSDDDL 99



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/124 (43%), Positives = 75/124 (60%), Gaps = 4/124 (3%)

Query: 222 LAENKLERNDEVSLSKGYSMKHGKKQVVLDENRRNTYKQFHQSLRESS--VLTTFDADKK 279
           + E + E+ D+ S +  YS K   K  V+DE RR TY +        S  +   F A+ K
Sbjct: 388 VDEVRSEKTDDTS-ALDYSAKPSHKPFVVDETRRKTYHEPEDQPSSDSELIFDVFCAEPK 446

Query: 280 QLMTVGLHSEHGYTRSLARFAANLGPVAWKIAARRIERCLPAGVRFGPGWVVENDLAPQR 339
           +L++VGLH+EH Y RSLARFA +LG   W+IA+ RI++ LP  VRFG GWV E +  P  
Sbjct: 447 ELISVGLHAEHSYARSLARFAGSLGAQGWRIASERIQQTLPTEVRFGRGWVEEYE-PPLP 505

Query: 340 PLLL 343
           P+L+
Sbjct: 506 PILV 509



 Score = 40.8 bits (94), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 9/50 (18%)

Query: 562 GLTP--QQKP--DAVPPDLNVRFRSPGSPNSSR-----VDSTQPDLALQL 602
           GL P  QQKP  D + PDLN+ F SPGSP + +     +++ QPDLALQL
Sbjct: 905 GLVPHMQQKPNKDMLRPDLNIGFPSPGSPPARQSSGINLEAQQPDLALQL 954


>gi|255584388|ref|XP_002532927.1| bromodomain-containing protein [Ricinus communis]
 gi|223527303|gb|EEF29454.1| bromodomain-containing protein [Ricinus communis]
          Length = 329

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 70/98 (71%), Gaps = 1/98 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEE+  Y  +I+ PMDFGT+R KL  G Y +LEQFE+DVFLI SNAM++N+  T+Y+ 
Sbjct: 169 VDPEEVIGYYNIIKEPMDFGTMRAKLQEGLYTSLEQFERDVFLISSNAMKFNSSTTVYYT 228

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTK 153
           +AR+I ELA++ F +LR + ++ + E    RR RP  K
Sbjct: 229 EARAISELAQRLFHSLRTEPENFQLEYSRTRR-RPGRK 265


>gi|297745735|emb|CBI15791.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 51/98 (52%), Positives = 67/98 (68%), Gaps = 2/98 (2%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D +E+  Y +VI+ PMDFGT+R KL  G Y TLEQFE DVF I SNAM +N+  T+YFR
Sbjct: 54  VDADEVEGYYDVIKEPMDFGTMRAKLQEGMYKTLEQFEHDVFQISSNAMLFNSSTTVYFR 113

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKVVRR--GRPP 151
           QAR++ ELA+K F+ L+   +  E E   +RR  GR P
Sbjct: 114 QARALRELAQKVFDALKTHPETLELEFSQIRRRPGRKP 151


>gi|147865333|emb|CAN79819.1| hypothetical protein VITISV_004433 [Vitis vinifera]
          Length = 747

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/108 (47%), Positives = 63/108 (58%), Gaps = 22/108 (20%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFE---------------------- 93
           +DPEE+ DY E+I+ PMDFGT+R KL  G Y  LEQFE                      
Sbjct: 146 VDPEEVEDYYEIIKEPMDFGTMRAKLHEGMYKNLEQFENTAPPLLVDVQKLTCLIVIFLK 205

Query: 94  KDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPE 141
            DVFLI SNAM +N+  TIYFRQAR++ EL+KK F  L+ D  + E E
Sbjct: 206 HDVFLISSNAMHFNSSATIYFRQARALQELSKKVFHVLKTDPRNFELE 253


>gi|156398114|ref|XP_001638034.1| predicted protein [Nematostella vectensis]
 gi|156225151|gb|EDO45971.1| predicted protein [Nematostella vectensis]
          Length = 612

 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 48/71 (67%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  VI HPMDF T++ K+ + +Y T+E F  D +L+C+NAM YNAPDTIYF+ A+ I 
Sbjct: 191 PGYSRVITHPMDFSTIKTKIDSNSYTTIEAFRDDFYLMCNNAMVYNAPDTIYFKAAKRIM 250

Query: 122 ELAKKNFENLR 132
           ++  K   N R
Sbjct: 251 QIGAKMMTNDR 261


>gi|426246877|ref|XP_004017214.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 9
           [Ovis aries]
          Length = 729

 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 47/74 (63%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDFGT+R+K+A   Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I 
Sbjct: 358 PGYSMIIKHPMDFGTMRDKIAANGYQSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKIL 417

Query: 122 ELAKKNFENLRQDS 135
               K    +R  S
Sbjct: 418 HAGFKMMSKVRASS 431


>gi|291237507|ref|XP_002738687.1| PREDICTED: bromodomain containing protein 1-like [Saccoglossus
           kowalevskii]
          Length = 1328

 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 47/69 (68%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           + P+E+PDY +VI  PMDF T+R +L N  Y T++ FEKD  L+ SN M YNA DTI++R
Sbjct: 653 VSPDEVPDYLDVITEPMDFSTIRTRLENHFYKTIDDFEKDFDLMISNCMTYNAKDTIFYR 712

Query: 116 QARSIHELA 124
            A  + ++ 
Sbjct: 713 AAIKLRDMG 721


>gi|449017171|dbj|BAM80573.1| similar to bromodomain containing transcription factor
           [Cyanidioschyzon merolae strain 10D]
          Length = 821

 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 1/81 (1%)

Query: 52  IDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYAT-LEQFEKDVFLICSNAMQYNAPD 110
           +D   +P+ +PDY E+I+ PMD GTVR KL +G Y T  E F +DV L+ SNAM YN PD
Sbjct: 359 VDKLWNPDAIPDYFEIIKQPMDLGTVRQKLESGEYGTDPEAFRRDVRLVWSNAMTYNPPD 418

Query: 111 TIYFRQARSIHELAKKNFENL 131
           + Y+  A+ ++E  ++  + L
Sbjct: 419 SEYYNIAKMLNEAFERKMQFL 439


>gi|321464264|gb|EFX75273.1| putative Bromodomain and PHD finger-containing protein [Daphnia
           pulex]
          Length = 1046

 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 52/79 (65%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  ++PDY + I+ PMDF T++NKL  G Y TLE FEKD  L+  N   YNA  T+Y++
Sbjct: 631 VDISQVPDYLDFIQQPMDFSTMQNKLDAGQYPTLEAFEKDFNLMIHNCTVYNAQHTMYYK 690

Query: 116 QARSIHELAKKNFENLRQD 134
           QA  + E A+  F+ LR+D
Sbjct: 691 QAIKLKEGAQVLFKQLRKD 709


>gi|426250203|ref|XP_004018827.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain and PHD
           finger-containing protein 3 [Ovis aries]
          Length = 1212

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 2/100 (2%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 623 EVPDYLEFISKPMDFSTMRRKLESHLYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 682

Query: 120 IHELAKKNFENLRQDSDD--NEPETKVVRRGRPPTKNFKK 157
           + +L      + R+ +++   +PET       P +++F +
Sbjct: 683 LRDLGGAILRHARRQAENIGYDPETGTHLPESPKSEDFYR 722


>gi|340368978|ref|XP_003383026.1| PREDICTED: peregrin-like [Amphimedon queenslandica]
          Length = 1083

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 51/68 (75%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +++PDY +VI+ PMDF T+R+KL +  Y +LE+FE D+ L+ +NAM YN  DTIY+R A 
Sbjct: 691 DDVPDYLDVIKCPMDFSTMRSKLDSHQYKSLEEFESDLKLVWNNAMTYNQKDTIYYRAAV 750

Query: 119 SIHELAKK 126
            I ++AK+
Sbjct: 751 RIRDVAKR 758


>gi|329663705|ref|NP_001192556.1| bromodomain and PHD finger-containing protein 3 [Bos taurus]
 gi|296474528|tpg|DAA16643.1| TPA: CG1845-like [Bos taurus]
          Length = 1207

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 2/100 (2%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 623 EVPDYLEFISKPMDFSTMRRKLESHLYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 682

Query: 120 IHELAKKNFENLRQDSDD--NEPETKVVRRGRPPTKNFKK 157
           + +L      + R+ +++   +PET       P +++F +
Sbjct: 683 LRDLGGAILRHARRQAENIGYDPETGTHLPESPKSEDFYR 722


>gi|395832260|ref|XP_003789191.1| PREDICTED: bromodomain and PHD finger-containing protein 3
           [Otolemur garnettii]
          Length = 1205

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 7/84 (8%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHEL-------AKKNFENLRQDSD 136
           + +L       A++  EN+  D D
Sbjct: 682 LRDLGGAILRHARRQAENIGYDPD 705


>gi|37360308|dbj|BAC98132.1| mKIAA1286 protein [Mus musculus]
          Length = 649

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 126 EVPDYLEFISKPMDFSTMRRKLESHLYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 185

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 186 LRDLGGAILRHARRQAEN 203


>gi|18676944|dbj|BAB85060.1| unnamed protein product [Homo sapiens]
          Length = 424

 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 36  EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 95

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 96  LRDLGGAILRHARRQAEN 113


>gi|385199233|gb|AFI44995.1| bromodomain and PHD finger-containing protein, partial [Mormia sp.
           nov. Purchase Knob Petros]
          Length = 637

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 51/83 (61%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY EV++HPMD  T+RNKL  G Y  L+  E D  L+  N + YN  DT+Y+R
Sbjct: 306 VDISEVPDYTEVVKHPMDLSTMRNKLEAGKYYNLDDLEADFDLMIRNCLAYNNRDTMYYR 365

Query: 116 QARSIHELAKKNFENLRQDSDDN 138
               + +     F+N+RQ+ +++
Sbjct: 366 AGVRMRDQCASLFKNIRQELEND 388


>gi|354493050|ref|XP_003508657.1| PREDICTED: bromodomain and PHD finger-containing protein 3-like
           [Cricetulus griseus]
 gi|344247509|gb|EGW03613.1| Bromodomain and PHD finger-containing protein 3 [Cricetulus
           griseus]
          Length = 1204

 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 621 EVPDYLEFISKPMDFSTMRRKLESHLYHTLEEFEEDFNLIVANCMKYNAKDTIFHRAAVR 680

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 681 LRDLGGAILRHARRQAEN 698


>gi|385199191|gb|AFI44974.1| bromodomain and PHD finger-containing protein, partial [Ptychoptera
           sp. GRC-2012]
          Length = 648

 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 53/82 (64%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY +++++PMD  T+R+K+ +GAY T ++FE D  L+  N + YN  DTI++R
Sbjct: 326 VDVSEVPDYTDIVKNPMDLSTMRSKIKSGAYTTFDKFEADFDLMIKNCLSYNNKDTIFYR 385

Query: 116 QARSIHELAKKNFENLRQDSDD 137
               + E+    F+  R++ +D
Sbjct: 386 AGIKMREIGHNLFKTARKELED 407


>gi|344264382|ref|XP_003404271.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain and PHD
           finger-containing protein 3-like [Loxodonta africana]
          Length = 1227

 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 645 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 704

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 705 LRDLGGAILRHARRQAEN 722


>gi|157821409|ref|NP_001101085.1| bromodomain and PHD finger-containing protein 3 [Rattus norvegicus]
 gi|149043488|gb|EDL96939.1| bromodomain and PHD finger containing, 3 (predicted) [Rattus
           norvegicus]
          Length = 1199

 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 621 EVPDYLEFISKPMDFSTMRRKLESHLYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 680

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 681 LRDLGGAILRHARRQAEN 698


>gi|124486783|ref|NP_001074784.1| bromodomain and PHD finger-containing protein 3 [Mus musculus]
 gi|187956992|gb|AAI57916.1| Bromodomain and PHD finger containing, 3 [Mus musculus]
          Length = 1204

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 621 EVPDYLEFISKPMDFSTMRRKLESHLYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 680

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 681 LRDLGGAILRHARRQAEN 698


>gi|148727368|ref|NP_056510.2| bromodomain and PHD finger-containing protein 3 [Homo sapiens]
 gi|71153496|sp|Q9ULD4.2|BRPF3_HUMAN RecName: Full=Bromodomain and PHD finger-containing protein 3
 gi|119624283|gb|EAX03878.1| bromodomain and PHD finger containing, 3, isoform CRA_b [Homo
           sapiens]
          Length = 1205

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699


>gi|449015449|dbj|BAM78851.1| unknown bromodomain-containing protein [Cyanidioschyzon merolae
           strain 10D]
          Length = 744

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 49/78 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPEE PDY EVI  PMD GT++ KL  G Y  L++ E+D+ LI  N   YN  ++IY+R
Sbjct: 253 VDPEEAPDYHEVIPEPMDLGTMQRKLETGKYRRLDEVERDLDLIWRNCFTYNPTNSIYYR 312

Query: 116 QARSIHELAKKNFENLRQ 133
           +A  + + A K  +  RQ
Sbjct: 313 EAARMQKWALKRVQWARQ 330


>gi|168273214|dbj|BAG10446.1| bromodomain and PHD finger-containing protein 3 [synthetic
           construct]
          Length = 1205

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699


>gi|6331389|dbj|BAA86600.1| KIAA1286 protein [Homo sapiens]
          Length = 1214

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 631 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 690

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 691 LRDLGGAILRHARRQAEN 708


>gi|224085193|ref|XP_002196597.1| PREDICTED: bromodomain and PHD finger-containing protein 3-like
           [Taeniopygia guttata]
          Length = 1118

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 50/77 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I +PMDF T+R KL +  Y TL++FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 601 EVPDYLEFISNPMDFSTMRRKLESHLYRTLDEFEEDFNLIVANCMRYNAKDTIFHRAAVR 660

Query: 120 IHELAKKNFENLRQDSD 136
           + +L      + R+ +D
Sbjct: 661 LRDLGGAILRHARRQAD 677


>gi|114607127|ref|XP_001172835.1| PREDICTED: bromodomain and PHD finger-containing protein 3 isoform
           3 [Pan troglodytes]
 gi|410300152|gb|JAA28676.1| bromodomain and PHD finger containing, 3 [Pan troglodytes]
          Length = 1205

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699


>gi|397496259|ref|XP_003818959.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain and PHD
           finger-containing protein 3 [Pan paniscus]
          Length = 1205

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699


>gi|355748502|gb|EHH52985.1| hypothetical protein EGM_13536 [Macaca fascicularis]
          Length = 1205

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699


>gi|410209438|gb|JAA01938.1| bromodomain and PHD finger containing, 3 [Pan troglodytes]
 gi|410264976|gb|JAA20454.1| bromodomain and PHD finger containing, 3 [Pan troglodytes]
 gi|410348494|gb|JAA40851.1| bromodomain and PHD finger containing, 3 [Pan troglodytes]
          Length = 1205

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699


>gi|338718061|ref|XP_001918146.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain and PHD
           finger-containing protein 3 [Equus caballus]
          Length = 1207

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 624 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 683

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 684 LRDLGGAVLRHARRQAEN 701


>gi|332259687|ref|XP_003278916.1| PREDICTED: bromodomain and PHD finger-containing protein 3
           [Nomascus leucogenys]
          Length = 1205

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699


>gi|297677962|ref|XP_002816851.1| PREDICTED: bromodomain and PHD finger-containing protein 3 isoform
           2 [Pongo abelii]
          Length = 1205

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699


>gi|380811766|gb|AFE77758.1| bromodomain and PHD finger-containing protein 3 [Macaca mulatta]
 gi|383417557|gb|AFH31992.1| bromodomain and PHD finger-containing protein 3 [Macaca mulatta]
 gi|384946470|gb|AFI36840.1| bromodomain and PHD finger-containing protein 3 [Macaca mulatta]
          Length = 1205

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699


>gi|402866807|ref|XP_003897565.1| PREDICTED: bromodomain and PHD finger-containing protein 3 [Papio
           anubis]
          Length = 1205

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699


>gi|348576332|ref|XP_003473941.1| PREDICTED: bromodomain and PHD finger-containing protein 3-like
           [Cavia porcellus]
          Length = 1208

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 626 EVPDYLEFISKPMDFSTMRRKLESHLYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 685

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 686 LRDLGGAILRHARRQAEN 703


>gi|301756985|ref|XP_002914339.1| PREDICTED: bromodomain and PHD finger-containing protein 3-like
           [Ailuropoda melanoleuca]
          Length = 1207

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 623 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 682

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 683 LRDLGGAILRHARRQAEN 700


>gi|426352889|ref|XP_004043936.1| PREDICTED: bromodomain and PHD finger-containing protein 3 [Gorilla
           gorilla gorilla]
          Length = 1205

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699


>gi|403261686|ref|XP_003923245.1| PREDICTED: bromodomain and PHD finger-containing protein 3 [Saimiri
           boliviensis boliviensis]
          Length = 1205

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699


>gi|355561634|gb|EHH18266.1| hypothetical protein EGK_14832 [Macaca mulatta]
          Length = 1205

 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699


>gi|345778685|ref|XP_538883.3| PREDICTED: bromodomain and PHD finger-containing protein 3 [Canis
           lupus familiaris]
          Length = 1207

 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 623 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 682

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 683 LRDLGGAILRHARRQAEN 700


>gi|291396103|ref|XP_002714704.1| PREDICTED: bromodomain and PHD finger containing, 3 [Oryctolagus
           cuniculus]
          Length = 1207

 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 623 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 682

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 683 LRDLGGAILRHARRQAEN 700


>gi|170064272|ref|XP_001867456.1| phd finger protein [Culex quinquefasciatus]
 gi|167881718|gb|EDS45101.1| phd finger protein [Culex quinquefasciatus]
          Length = 887

 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 49/79 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D EE+ DY ++++HPMD GT+R KL  G Y ++E  E D  L+C+N + YN  DT+++R
Sbjct: 683 VDTEEVHDYLDIVKHPMDLGTMRQKLKTGHYCSIEDLEADFLLMCNNCLTYNNKDTMFYR 742

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F  +R++
Sbjct: 743 AGVKMKDAGTIIFRTIRKE 761


>gi|390461571|ref|XP_002746520.2| PREDICTED: bromodomain and PHD finger-containing protein 3
           [Callithrix jacchus]
          Length = 1101

 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699


>gi|297290685|ref|XP_002803774.1| PREDICTED: bromodomain and PHD finger-containing protein 3-like
           [Macaca mulatta]
          Length = 1115

 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 50/79 (63%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           E +PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A 
Sbjct: 531 EPVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAV 590

Query: 119 SIHELAKKNFENLRQDSDD 137
            + +L      + R+ +++
Sbjct: 591 RLRDLGGAILRHARRQAEN 609


>gi|385199215|gb|AFI44986.1| bromodomain and PHD finger-containing protein, partial
           [Trichopsychoda sp. nov. Thailand]
          Length = 535

 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 50/83 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HPMD  T+RNKLA G Y TL+  E D  L+  N + YN  DT+Y+R
Sbjct: 323 VDIAEVPDYMDIVKHPMDLSTMRNKLAAGMYYTLDDLEADFDLMIRNCLAYNNRDTMYYR 382

Query: 116 QARSIHELAKKNFENLRQDSDDN 138
               + +     F  LRQ  +++
Sbjct: 383 AGVRMRDQCAVLFRELRQSLEED 405


>gi|363742984|ref|XP_419262.3| PREDICTED: LOW QUALITY PROTEIN: bromodomain and PHD
           finger-containing protein 3 [Gallus gallus]
          Length = 1174

 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 51/77 (66%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I +PMDF T+R KL +  Y TL++FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 601 EVPDYLEFISNPMDFSTMRRKLESHLYRTLDEFEEDFNLIVTNCMRYNAKDTIFHRAAVR 660

Query: 120 IHELAKKNFENLRQDSD 136
           + +L      ++R+ ++
Sbjct: 661 LRDLGGAILRHVRRQAE 677


>gi|410959026|ref|XP_003986113.1| PREDICTED: bromodomain and PHD finger-containing protein 3 isoform
           1 [Felis catus]
          Length = 936

 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 623 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 682

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 683 LRDLGGAILRHARRQAEN 700


>gi|357119896|ref|XP_003561669.1| PREDICTED: uncharacterized protein LOC100840589 [Brachypodium
           distachyon]
          Length = 564

 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 1/89 (1%)

Query: 54  FKM-DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTI 112
           F M D  ++ DY E +  P DF T+R K  +G Y TLEQFE DV+++   AM  N+ DT+
Sbjct: 112 FAMPDDIQIVDYAERVNRPGDFATLRQKNTDGMYKTLEQFENDVYMVFQKAMSINSQDTV 171

Query: 113 YFRQARSIHELAKKNFENLRQDSDDNEPE 141
            +++A S+ E AK+ F +L+ +   +EPE
Sbjct: 172 PYKEATSLLEQAKQVFVSLKSNQMYSEPE 200


>gi|384485160|gb|EIE77340.1| hypothetical protein RO3G_02044 [Rhizopus delemar RA 99-880]
          Length = 602

 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DP  +PDY +VI+ PMDF T+  KL  GAY  +E F +D  LI SNA  YNA DTIY++
Sbjct: 230 VDPNFVPDYLKVIKSPMDFLTMSKKLERGAYTNVEDFRQDFNLIVSNAKLYNAIDTIYWK 289

Query: 116 QARSIHELAKK 126
            A  ++E+  K
Sbjct: 290 SADKLYEVGSK 300


>gi|312370765|gb|EFR19092.1| hypothetical protein AND_23080 [Anopheles darlingi]
          Length = 1234

 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 49/79 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D EE+PDY ++++HPMD GT+R KL  GAY  +E  E+D  L+  N + YN  DT+++R
Sbjct: 612 VDIEEVPDYTDIVKHPMDLGTMRQKLKRGAYVRIEDLEQDFALMIRNCLAYNNKDTMFYR 671

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F  +R++
Sbjct: 672 AGVRMRDAGAIVFRTVRKE 690


>gi|326933544|ref|XP_003212862.1| PREDICTED: bromodomain and PHD finger-containing protein 3-like
           [Meleagris gallopavo]
          Length = 1167

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 51/77 (66%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I +PMDF T+R KL +  Y TL++FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 601 EVPDYLEFISNPMDFSTMRRKLESHLYRTLDEFEEDFNLIVTNCMRYNAKDTIFHRAAVR 660

Query: 120 IHELAKKNFENLRQDSD 136
           + +L      ++R+ ++
Sbjct: 661 LRDLGGAILRHVRRQAE 677


>gi|149465920|ref|XP_001518528.1| PREDICTED: bromodomain and PHD finger-containing protein 3, partial
           [Ornithorhynchus anatinus]
          Length = 1059

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 2/100 (2%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  L+ +N M+YNA DTI+ R A  
Sbjct: 625 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLLVTNCMKYNAKDTIFHRAAVR 684

Query: 120 IHELAKKNFENLRQDSD--DNEPETKVVRRGRPPTKNFKK 157
           + +L      + R+ ++    +PE        P T++F +
Sbjct: 685 LRDLGGAVLRHTRRQAETIGYDPEVGTHLPESPQTEDFYR 724


>gi|109659078|gb|AAI17388.1| BRPF3 protein [Homo sapiens]
 gi|219518057|gb|AAI43918.1| BRPF3 protein [Homo sapiens]
          Length = 935

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699


>gi|148690644|gb|EDL22591.1| mCG18535 [Mus musculus]
          Length = 1199

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 50/79 (63%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           E +PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A 
Sbjct: 615 EPVPDYLEFISKPMDFSTMRRKLESHLYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAV 674

Query: 119 SIHELAKKNFENLRQDSDD 137
            + +L      + R+ +++
Sbjct: 675 RLRDLGGAILRHARRQAEN 693


>gi|291413973|ref|XP_002723244.1| PREDICTED: bromodomain containing 9 [Oryctolagus cuniculus]
          Length = 606

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 43/59 (72%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+R+K+A   Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 180 PGYSMIIKHPMDFGTMRDKIAANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 238


>gi|219521531|gb|AAI43919.1| BRPF3 protein [Homo sapiens]
          Length = 871

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699


>gi|410959028|ref|XP_003986114.1| PREDICTED: bromodomain and PHD finger-containing protein 3 isoform
           2 [Felis catus]
          Length = 872

 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 623 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 682

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 683 LRDLGGAILRHARRQAEN 700


>gi|158285345|ref|XP_564621.3| AGAP007617-PA [Anopheles gambiae str. PEST]
 gi|157019947|gb|EAL41745.3| AGAP007617-PA [Anopheles gambiae str. PEST]
          Length = 1174

 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 49/79 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D EE+PDY ++++HPMD GT+R KL  GAY  +E  E+D  L+  N + YN  DT+++R
Sbjct: 611 VDTEEVPDYTDIVKHPMDLGTMRQKLKRGAYIRIEDLEQDFQLMIRNCLAYNNKDTMFYR 670

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F  +R++
Sbjct: 671 AGVRMRDAGAIVFRTVRKE 689


>gi|198456013|ref|XP_001360203.2| GA14940 [Drosophila pseudoobscura pseudoobscura]
 gi|198135484|gb|EAL24777.2| GA14940 [Drosophila pseudoobscura pseudoobscura]
          Length = 1430

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 49/79 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HPMD GT+R +L +  Y TLEQ E D  L+  N + YN  DT+++R
Sbjct: 635 VDTSEVPDYTDIVKHPMDLGTMRTRLKDCQYTTLEQLETDFDLMIQNCLAYNNKDTVFYR 694

Query: 116 QARSIHELAKKNFENLRQD 134
               + + A   F  LR++
Sbjct: 695 AGIRLRDQAAPLFVQLRKE 713


>gi|195149291|ref|XP_002015591.1| GL10942 [Drosophila persimilis]
 gi|194109438|gb|EDW31481.1| GL10942 [Drosophila persimilis]
          Length = 1430

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 49/79 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HPMD GT+R +L +  Y TLEQ E D  L+  N + YN  DT+++R
Sbjct: 635 VDTSEVPDYTDIVKHPMDLGTMRTRLKDCQYTTLEQLETDFDLMIQNCLAYNNKDTVFYR 694

Query: 116 QARSIHELAKKNFENLRQD 134
               + + A   F  LR++
Sbjct: 695 AGIRLRDQAAPLFVQLRKE 713


>gi|300796945|ref|NP_001180021.1| bromodomain-containing protein 9 [Bos taurus]
 gi|296475650|tpg|DAA17765.1| TPA: bromodomain containing 9 [Bos taurus]
          Length = 596

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 43/59 (72%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+A   Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIAANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229


>gi|444732380|gb|ELW72678.1| Solute carrier family 12 member 7 [Tupaia chinensis]
          Length = 1478

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 43/59 (72%)

Query: 62   PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
            P Y  +I+HPMDFGT+R+++A   Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 1066 PGYSMIIKHPMDFGTMRDRIAASEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 1124


>gi|385199151|gb|AFI44954.1| bromodomain and PHD finger-containing protein, partial [Pericoma
           signata]
          Length = 748

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 51/82 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY E+++HPMD  T+RNKL +G Y  L+  E D  L+  N + YN  +T+Y+R
Sbjct: 317 VDVNEVPDYSEIVKHPMDLSTMRNKLESGKYFNLDDLEADFDLMIRNCLAYNNRETMYYR 376

Query: 116 QARSIHELAKKNFENLRQDSDD 137
               + +     F+N+R+D ++
Sbjct: 377 AGVRMRDQCASLFKNVREDLEN 398


>gi|126309915|ref|XP_001378780.1| PREDICTED: bromodomain and PHD finger-containing protein 3
           [Monodelphis domestica]
          Length = 1184

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 47/74 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  
Sbjct: 608 EVPDYLEFISKPMDFSTMRLKLESHLYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 667

Query: 120 IHELAKKNFENLRQ 133
           + +L      + R+
Sbjct: 668 LRDLGGAVLRHARR 681


>gi|385199205|gb|AFI44981.1| bromodomain and PHD finger-containing protein, partial [Stupkaiella
           furcata]
          Length = 655

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 48/79 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY EV++HPMD  T+RNK+  G Y  L+  E D  L+  N + YN  DT+Y+R
Sbjct: 320 VDVTEVPDYSEVVKHPMDLSTMRNKMEAGKYYNLDDLEADFDLMIRNCLAYNNRDTMYYR 379

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+N+R+D
Sbjct: 380 AGVRMRDQCAFLFKNVRED 398


>gi|395534025|ref|XP_003769049.1| PREDICTED: bromodomain and PHD finger-containing protein 3
           [Sarcophilus harrisii]
          Length = 1184

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 50/78 (64%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  L+ +N M+YNA DTI+ R A  
Sbjct: 608 EVPDYLEFISEPMDFSTMRLKLESHLYRTLEEFEEDFNLMVTNCMKYNAKDTIFHRAAVR 667

Query: 120 IHELAKKNFENLRQDSDD 137
           + +L      + R+ +++
Sbjct: 668 LRDLGGAVLRHARRQAEN 685


>gi|449272789|gb|EMC82523.1| Bromodomain-containing protein 9 [Columba livia]
          Length = 603

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT++ K+A   Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 178 PGYSMIIKHPMDFGTMKEKIAANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 236


>gi|363730306|ref|XP_418893.3| PREDICTED: bromodomain-containing protein 9-like [Gallus gallus]
          Length = 606

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT++ K+A   Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 180 PGYSMIIKHPMDFGTMKEKIAANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 238


>gi|385199227|gb|AFI44992.1| bromodomain and PHD finger-containing protein, partial [Berdeniella
           illiesi]
          Length = 506

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 49/79 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY EV++HPMD  T+RNKL +G Y  L+  E D  L+  N + YN  +T+Y+R
Sbjct: 321 VDVTEVPDYSEVVKHPMDLSTMRNKLESGKYFNLDDLEADFDLMIRNCLAYNNRETMYYR 380

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+N+R+D
Sbjct: 381 AGVRMRDQCASLFKNVRED 399


>gi|440906932|gb|ELR57143.1| Bromodomain-containing protein 9, partial [Bos grunniens mutus]
          Length = 585

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 43/59 (72%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+A   Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 152 PGYSMIIKHPMDFGTMKDKIAANEYKSVTEFKVDFKLMCDNAMTYNRPDTVYYKLAKKI 210


>gi|429963278|gb|ELA42822.1| hypothetical protein VICG_00137 [Vittaforma corneae ATCC 50505]
          Length = 449

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 4/73 (5%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +++PDY EVI+HPMD   +  KL  G Y TL+ F  DV L+C+N   YN PDT Y++ A 
Sbjct: 360 KDVPDYFEVIKHPMDLSLIMRKLKGGMYFTLKDFALDVCLMCNNCFSYNGPDTQYYKCAE 419

Query: 119 SIHELAKKNFENL 131
           +I    KK FE+L
Sbjct: 420 NI----KKYFESL 428


>gi|332864070|ref|XP_001139048.2| PREDICTED: bromodomain-containing protein 9 isoform 4 [Pan
           troglodytes]
          Length = 593

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ AR +
Sbjct: 167 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLARKV 225


>gi|327275191|ref|XP_003222357.1| PREDICTED: bromodomain-containing protein 9-like [Anolis
           carolinensis]
          Length = 617

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 43/59 (72%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+A   Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 192 PGYSMIIKHPMDFGTMKDKIAANDYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 250


>gi|385199211|gb|AFI44984.1| bromodomain and PHD finger-containing protein, partial [Stupkaiella
           bipunctata]
          Length = 597

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 48/79 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY EV++HPMD  T+RNK+  G Y  L+  E D  L+  N + YN  DT+Y+R
Sbjct: 320 VDITEVPDYSEVVKHPMDLSTMRNKMEAGKYYNLDDLEADFDLMIRNCLAYNNRDTMYYR 379

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+N+R+D
Sbjct: 380 AGVRMRDQCAFLFKNVRED 398


>gi|385199229|gb|AFI44993.1| bromodomain and PHD finger-containing protein, partial [Ulomyia
           fuliginosa]
          Length = 506

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 51/82 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY E+++HPMD  T+RNKL +G Y  L+  E D  L+  N + YN  +T+Y+R
Sbjct: 321 VDVSEVPDYSEIVKHPMDLSTMRNKLESGKYFNLDDLEADFDLMIRNCLAYNNRETMYYR 380

Query: 116 QARSIHELAKKNFENLRQDSDD 137
               + +     F+N+R+D ++
Sbjct: 381 AGVRMRDQCASLFKNVREDLEN 402


>gi|332228128|ref|XP_003263241.1| PREDICTED: bromodomain-containing protein 9 isoform 2 [Nomascus
           leucogenys]
          Length = 544

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 176


>gi|449493407|ref|XP_002194228.2| PREDICTED: bromodomain-containing protein 9-like [Taeniopygia
           guttata]
          Length = 650

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT++ K+A   Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 180 PGYSMIIKHPMDFGTMKEKIAANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 238


>gi|242247075|ref|NP_001009877.2| bromodomain-containing protein 9 isoform 2 [Homo sapiens]
 gi|194387196|dbj|BAG59964.1| unnamed protein product [Homo sapiens]
          Length = 544

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 176


>gi|410949815|ref|XP_004001412.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 9
           [Felis catus]
          Length = 544

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 117 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 175


>gi|326916895|ref|XP_003204740.1| PREDICTED: bromodomain-containing protein 9-like [Meleagris
           gallopavo]
          Length = 592

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT++ K+A   Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 166 PGYSMIIKHPMDFGTMKEKIAANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 224


>gi|326911273|ref|XP_003201985.1| PREDICTED: bromodomain-containing protein 1-like [Meleagris
           gallopavo]
          Length = 553

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 4/85 (4%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DTI++R A 
Sbjct: 89  KEVPDYLDHIKHPMDFSTMRKRLDAQGYKNLSEFEEDFNLIIDNCMKYNAKDTIFYRAAV 148

Query: 119 SIHELAKKNFENLRQDSD----DNE 139
            + +         R+D++    DNE
Sbjct: 149 RLRDQGGVVLRQARRDAEGIGYDNE 173


>gi|410918997|ref|XP_003972971.1| PREDICTED: bromodomain-containing protein 1-like [Takifugu
           rubripes]
          Length = 1232

 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 50/79 (63%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY + I+HPMDF T+R ++ + +Y+ L+QFEKD  LI  N M+YN+ DT ++R
Sbjct: 603 VDVSEVPDYLDHIKHPMDFSTMRQRIDSQSYSNLDQFEKDFNLIVDNCMKYNSKDTYFYR 662

Query: 116 QARSIHELAKKNFENLRQD 134
            A  + +         R+D
Sbjct: 663 AAVRLRDQGGALLRKARRD 681


>gi|426385250|ref|XP_004059135.1| PREDICTED: bromodomain-containing protein 9 isoform 1 [Gorilla
           gorilla gorilla]
          Length = 543

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 117 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 175


>gi|359323738|ref|XP_003640177.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 9
           [Canis lupus familiaris]
          Length = 545

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 118 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 176


>gi|81022914|gb|ABB55266.1| rhabdomyosarcoma antigen MU-RMS-40.8 [Homo sapiens]
          Length = 427

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 1   PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 59


>gi|327283585|ref|XP_003226521.1| PREDICTED: bromodomain and PHD finger-containing protein 3-like
           [Anolis carolinensis]
          Length = 1159

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 2/100 (2%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL +  Y TL++FE+D  LI +N M+YN+ DTI+ R A  
Sbjct: 589 EVPDYLEFISKPMDFATMRQKLESHQYQTLDEFEEDFNLILTNCMRYNSKDTIFHRAAIR 648

Query: 120 IHELAKKNFENLRQDSDD--NEPETKVVRRGRPPTKNFKK 157
           + +L      + R+ ++    +P+  +     P T++F +
Sbjct: 649 LRDLGGAILRHARRQAETIGFDPQMGIHLPESPKTQDFYR 688


>gi|301782537|ref|XP_002926692.1| PREDICTED: bromodomain-containing protein 9-like [Ailuropoda
           melanoleuca]
          Length = 628

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 201 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 259


>gi|281340611|gb|EFB16195.1| hypothetical protein PANDA_016373 [Ailuropoda melanoleuca]
          Length = 490

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 43  PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 101


>gi|149032815|gb|EDL87670.1| bromodomain containing 9 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 609

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 163 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 221


>gi|157819385|ref|NP_001100923.1| bromodomain-containing protein 9 [Rattus norvegicus]
 gi|149032814|gb|EDL87669.1| bromodomain containing 9 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 589

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 163 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 221


>gi|195430302|ref|XP_002063195.1| GK21522 [Drosophila willistoni]
 gi|194159280|gb|EDW74181.1| GK21522 [Drosophila willistoni]
          Length = 1433

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 50/79 (63%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++ PMD GT+R+KL N  Y++LEQ E D  L+  N + YN  DT+++R
Sbjct: 659 VDTSEVPDYMDIVKQPMDLGTMRDKLKNCKYSSLEQLEVDFDLMIQNCLAYNNKDTVFYR 718

Query: 116 QARSIHELAKKNFENLRQD 134
               + + A   F  LR++
Sbjct: 719 AGIRMRDQAAPLFVQLRKE 737


>gi|334347545|ref|XP_001363159.2| PREDICTED: bromodomain-containing protein 1 isoform 2 [Monodelphis
           domestica]
          Length = 1187

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 49/78 (62%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L++FE+D  LI  N M+YNA DTI++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLDAQGYRDLKEFEEDFHLIIDNCMKYNAKDTIFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+D++
Sbjct: 654 RLRDQGGLVLRQTRRDAE 671


>gi|196003994|ref|XP_002111864.1| hypothetical protein TRIADDRAFT_35784 [Trichoplax adhaerens]
 gi|190585763|gb|EDV25831.1| hypothetical protein TRIADDRAFT_35784, partial [Trichoplax
           adhaerens]
          Length = 1050

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 4/131 (3%)

Query: 7   LAVLTVKRER--RLFLVRIQQITTKGLS--WNWDPQRLYQIKSYCCSSSIDFKMDPEELP 62
           L  L  KRE+  R ++   Q++T   +   ++     LYQ++   C       +  EE+ 
Sbjct: 455 LIELVRKREKLKRDYMRLCQKVTDMRIRPLYSILKSCLYQLRERDCYEIFAEPVSLEEVK 514

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DY   IE PMD  T+  +L +G Y ++  FE D +L+ +N + YN PDTIY++    + E
Sbjct: 515 DYLSFIESPMDLSTMEKRLESGHYQSIVDFESDFYLMINNCLAYNQPDTIYYKWGVKVRE 574

Query: 123 LAKKNFENLRQ 133
             K  F+ +R+
Sbjct: 575 AGKAIFKEVRR 585


>gi|390460171|ref|XP_003732434.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 9
           [Callithrix jacchus]
          Length = 602

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229


>gi|432104625|gb|ELK31237.1| Bromodomain-containing protein 9 [Myotis davidii]
          Length = 825

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 378 PGYSMIIKHPMDFGTMKDKIMANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 436


>gi|395859489|ref|XP_003802071.1| PREDICTED: bromodomain-containing protein 9, partial [Otolemur
           garnettii]
          Length = 593

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 168 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 226


>gi|431900731|gb|ELK08175.1| Bromodomain-containing protein 9 [Pteropus alecto]
          Length = 604

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 159 PGYSMIIKHPMDFGTMKDKIGANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 217


>gi|148705130|gb|EDL37077.1| mCG124248, isoform CRA_a [Mus musculus]
          Length = 617

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229


>gi|112817628|ref|NP_001019679.2| bromodomain-containing protein 9 [Mus musculus]
 gi|112180423|gb|AAH31484.1| Bromodomain containing 9 [Mus musculus]
 gi|148705131|gb|EDL37078.1| mCG124248, isoform CRA_b [Mus musculus]
          Length = 597

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229


>gi|109940028|sp|Q3UQU0.1|BRD9_MOUSE RecName: Full=Bromodomain-containing protein 9
 gi|74209103|dbj|BAE24949.1| unnamed protein product [Mus musculus]
          Length = 596

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229


>gi|410335273|gb|JAA36583.1| bromodomain containing 9 [Pan troglodytes]
          Length = 597

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229


>gi|385199173|gb|AFI44965.1| bromodomain and PHD finger-containing protein, partial [Nemapalpus
           nearcticus]
          Length = 737

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 16/113 (14%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY E+++HPMD  T+R KL +G+Y  L+  E D  L+  N + YN  DT+Y+R
Sbjct: 354 VDISEVPDYTEIVKHPMDLSTMRKKLDSGSYYNLDDMEADFDLMIRNCLAYNNKDTMYYR 413

Query: 116 -------QARSIHELAKKNFEN--LRQDSDDNEP-------ETKVVRRGRPPT 152
                  Q  SI   A+K  E   L Q    +E        E K++ R +PPT
Sbjct: 414 AGVRMKDQGGSIFRAARKELEKEGLIQTKKTDEAVAQEIDEEFKLLTREQPPT 466


>gi|426385252|ref|XP_004059136.1| PREDICTED: bromodomain-containing protein 9 isoform 2 [Gorilla
           gorilla gorilla]
          Length = 501

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 55  PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 113


>gi|297674863|ref|XP_002815427.1| PREDICTED: bromodomain-containing protein 9 [Pongo abelii]
          Length = 597

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229


>gi|10435455|dbj|BAB14591.1| unnamed protein product [Homo sapiens]
 gi|119628597|gb|EAX08192.1| bromodomain containing 9, isoform CRA_f [Homo sapiens]
          Length = 501

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 55  PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 113


>gi|410226758|gb|JAA10598.1| bromodomain containing 9 [Pan troglodytes]
 gi|410255036|gb|JAA15485.1| bromodomain containing 9 [Pan troglodytes]
 gi|410297628|gb|JAA27414.1| bromodomain containing 9 [Pan troglodytes]
          Length = 597

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229


>gi|27370802|gb|AAH41590.1| Bromodomain containing 9 [Homo sapiens]
 gi|119628592|gb|EAX08187.1| bromodomain containing 9, isoform CRA_a [Homo sapiens]
 gi|167773233|gb|ABZ92051.1| bromodomain containing 9 [synthetic construct]
          Length = 481

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 55  PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 113


>gi|417403165|gb|JAA48401.1| Putative irf-2-binding protein celtix-1 [Desmodus rotundus]
          Length = 598

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229


>gi|386781316|ref|NP_001248118.1| bromodomain-containing protein 9 [Macaca mulatta]
 gi|380815804|gb|AFE79776.1| bromodomain-containing protein 9 isoform 1 [Macaca mulatta]
 gi|380815806|gb|AFE79777.1| bromodomain-containing protein 9 isoform 1 [Macaca mulatta]
 gi|383420955|gb|AFH33691.1| bromodomain-containing protein 9 isoform 1 [Macaca mulatta]
 gi|383420957|gb|AFH33692.1| bromodomain-containing protein 9 isoform 1 [Macaca mulatta]
 gi|384948924|gb|AFI38067.1| bromodomain-containing protein 9 isoform 1 [Macaca mulatta]
 gi|384948926|gb|AFI38068.1| bromodomain-containing protein 9 isoform 1 [Macaca mulatta]
          Length = 597

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229


>gi|237649104|ref|NP_076413.3| bromodomain-containing protein 9 isoform 1 [Homo sapiens]
 gi|239938605|sp|Q9H8M2.2|BRD9_HUMAN RecName: Full=Bromodomain-containing protein 9; AltName:
           Full=Rhabdomyosarcoma antigen MU-RMS-40.8
 gi|194386790|dbj|BAG61205.1| unnamed protein product [Homo sapiens]
          Length = 597

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229


>gi|441614632|ref|XP_004088235.1| PREDICTED: bromodomain-containing protein 9 [Nomascus leucogenys]
          Length = 597

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229


>gi|402871062|ref|XP_003899506.1| PREDICTED: bromodomain-containing protein 9 [Papio anubis]
          Length = 597

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229


>gi|410039056|ref|XP_001175132.3| PREDICTED: bromodomain-containing protein 9 [Pan troglodytes]
          Length = 563

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229


>gi|354506643|ref|XP_003515369.1| PREDICTED: bromodomain-containing protein 9 [Cricetulus griseus]
          Length = 583

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 157 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 215


>gi|148705132|gb|EDL37079.1| mCG124248, isoform CRA_c [Mus musculus]
          Length = 457

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 31  PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 89


>gi|126338670|ref|XP_001363073.1| PREDICTED: bromodomain-containing protein 1 isoform 1 [Monodelphis
           domestica]
          Length = 1056

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 49/78 (62%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L++FE+D  LI  N M+YNA DTI++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLDAQGYRDLKEFEEDFHLIIDNCMKYNAKDTIFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+D++
Sbjct: 654 RLRDQGGLVLRQTRRDAE 671


>gi|403282301|ref|XP_003932591.1| PREDICTED: bromodomain-containing protein 9 [Saimiri boliviensis
           boliviensis]
          Length = 794

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 174 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 232


>gi|355762841|gb|EHH62064.1| hypothetical protein EGM_20251 [Macaca fascicularis]
          Length = 504

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 56  PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 114


>gi|194380932|dbj|BAG64034.1| unnamed protein product [Homo sapiens]
          Length = 649

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 54  KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAM 113

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 114 RLRDQGGVVLRQARREVD 131


>gi|355691184|gb|EHH26369.1| hypothetical protein EGK_16322 [Macaca mulatta]
          Length = 504

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 56  PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 114


>gi|351708268|gb|EHB11187.1| Bromodomain-containing protein 9 [Heterocephalus glaber]
          Length = 757

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 3/75 (4%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I 
Sbjct: 234 PGYSMIIKHPMDFGTMKDKIIANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI- 292

Query: 122 ELAKKNFENLRQDSD 136
                 F+ + +D D
Sbjct: 293 --LHAGFKMMSKDMD 305


>gi|126320806|ref|XP_001363295.1| PREDICTED: bromodomain-containing protein 9 [Monodelphis domestica]
          Length = 599

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 173 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 231


>gi|345329201|ref|XP_001509191.2| PREDICTED: bromodomain-containing protein 7, partial
           [Ornithorhynchus anatinus]
          Length = 571

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 53/80 (66%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+CSNAM YN P+TIY++ A+ + 
Sbjct: 81  PGYSMIIKHPMDFSTMKEKIKNNGYQSIEELKDNFKLMCSNAMIYNKPETIYYKAAKKLL 140

Query: 122 E-----LAKKNFENLRQDSD 136
           +     L+++  ++L+Q  D
Sbjct: 141 QSGMKILSQERIQSLKQSID 160


>gi|124810503|ref|XP_001348898.1| bromodomain protein, putative [Plasmodium falciparum 3D7]
 gi|23497800|gb|AAN37337.1| bromodomain protein, putative [Plasmodium falciparum 3D7]
          Length = 729

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 42/66 (63%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY  VI+ PMDF T++ KL N  Y + ++FEKDV LI +N   YN P TIY++ A  I
Sbjct: 46  VPDYLNVIKEPMDFTTMKQKLQNFKYKSFQEFEKDVLLIINNCYTYNDPSTIYYKFAEDI 105

Query: 121 HELAKK 126
               KK
Sbjct: 106 ETYYKK 111


>gi|385199153|gb|AFI44955.1| bromodomain and PHD finger-containing protein, partial [Clogmia
           albipunctata]
          Length = 658

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 49/79 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY E+++HPMD  T+R+KL +G Y  L+ FE D  L+  N + YN  DT+Y+R
Sbjct: 344 VDITEVPDYTEIVKHPMDLSTMRHKLDSGKYYNLDDFEADFDLMIRNCLAYNNRDTMYYR 403

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F N+R++
Sbjct: 404 AGIRMRDQCASLFTNVREE 422


>gi|395537675|ref|XP_003770819.1| PREDICTED: bromodomain-containing protein 1 isoform 1 [Sarcophilus
           harrisii]
          Length = 1185

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 48/78 (61%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DTI++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLDAQGYRDLNEFEEDFHLIIDNCMKYNAKDTIFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+D++
Sbjct: 654 RLRDQGGLVLRQTRRDAE 671


>gi|395510759|ref|XP_003759638.1| PREDICTED: bromodomain-containing protein 9 [Sarcophilus harrisii]
          Length = 606

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 181 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 239


>gi|348552662|ref|XP_003462146.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein
           9-like [Cavia porcellus]
          Length = 597

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIIANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229


>gi|5262603|emb|CAB45742.1| hypothetical protein [Homo sapiens]
          Length = 715

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 120 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 179

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 180 RLRDQGGVVLRQARREVD 197


>gi|403358213|gb|EJY78743.1| Histone acetyltransferase gcn5 [Oxytricha trifallax]
          Length = 465

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 51/80 (63%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DP+++PDY ++I  PMD   ++  L    Y T++QF+KD+  I  NA QYN P+TIY++
Sbjct: 315 VDPKKVPDYHQIIREPMDLEKIQKNLNESLYHTVDQFKKDLIKIFDNARQYNNPETIYYK 374

Query: 116 QARSIHELAKKNFENLRQDS 135
            A  +  L K   + +R+++
Sbjct: 375 YANQLQALVKPMLDRMRENN 394


>gi|385199231|gb|AFI44994.1| bromodomain and PHD finger-containing protein, partial
           [Gondwanoscurus cruciferus]
          Length = 628

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 48/79 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D +E+PDY E+++HPMD  ++RNKL  G Y  L+  E D  L+  N + YN  DT+Y+R
Sbjct: 318 VDIDEVPDYTEIVKHPMDLSSMRNKLECGKYYNLDDLEADFDLMIRNCLAYNNRDTMYYR 377

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+ +R+D
Sbjct: 378 AGVRMRDQCASLFKTVRED 396


>gi|119628595|gb|EAX08190.1| bromodomain containing 9, isoform CRA_d [Homo sapiens]
          Length = 402

 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 55  PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 113


>gi|449481002|ref|XP_002187986.2| PREDICTED: bromodomain-containing protein 1 isoform 1 [Taeniopygia
           guttata]
          Length = 1189

 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 48/78 (61%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DTI++R A 
Sbjct: 597 KEVPDYLDHIKHPMDFSTMRKRLEAQGYKNLSEFEEDFNLIIDNCMKYNAKDTIFYRAAV 656

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+D++
Sbjct: 657 RLRDQGGVVLRQARRDAE 674


>gi|395537677|ref|XP_003770820.1| PREDICTED: bromodomain-containing protein 1 isoform 2 [Sarcophilus
           harrisii]
          Length = 1056

 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 48/78 (61%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DTI++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLDAQGYRDLNEFEEDFHLIIDNCMKYNAKDTIFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+D++
Sbjct: 654 RLRDQGGLVLRQTRRDAE 671


>gi|385199159|gb|AFI44958.1| bromodomain and PHD finger-containing protein, partial [Panimerus
           basalis]
          Length = 686

 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 48/79 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY EV++HPMD  T+R+KL +G Y  L+  E D  L+  N + YN  DT+Y+R
Sbjct: 304 VDISEVPDYTEVVKHPMDLSTMRHKLESGKYYNLDDMEADFDLMIRNCLAYNNRDTMYYR 363

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+N+R +
Sbjct: 364 AGVRMRDQCATLFKNIRDE 382


>gi|313747462|ref|NP_001186411.1| bromodomain-containing protein 1 [Gallus gallus]
          Length = 1058

 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 4/85 (4%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DTI++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFSTMRKRLDAQGYKNLSEFEEDFNLIIDNCMKYNAKDTIFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD----DNE 139
            + +         R+D++    DNE
Sbjct: 654 RLRDQGGVVLRQARRDAEGIGYDNE 678


>gi|385199223|gb|AFI44990.1| bromodomain and PHD finger-containing protein, partial [Phlebotomus
           sergenti]
          Length = 643

 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 48/79 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HPMD  T+  KL NGAY +L+  E D  L+  N + YN  DTI++R
Sbjct: 325 VDVNEVPDYTDIVKHPMDLSTMATKLKNGAYESLDDMEADFDLMIRNCLAYNNKDTIFYR 384

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+ +R+D
Sbjct: 385 AGARMRDQGGALFKAVRKD 403


>gi|221044970|dbj|BAH14162.1| unnamed protein product [Homo sapiens]
          Length = 784

 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 189 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 248

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 249 RLRDQGGVVLRQARREVD 266


>gi|344308313|ref|XP_003422822.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein
           9-like [Loxodonta africana]
          Length = 598

 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVAHEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229


>gi|385199199|gb|AFI44978.1| bromodomain and PHD finger-containing protein, partial [Phlebotomus
           papatasi]
          Length = 648

 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 48/79 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HPMD  T+  KL NGAY +L+  E D  L+  N + YN  DTI++R
Sbjct: 330 VDVNEVPDYTDIVKHPMDLSTMATKLKNGAYESLDDMEADFDLMIRNCLAYNNKDTIFYR 389

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+ +R+D
Sbjct: 390 AGARMRDQGGALFKAVRKD 408


>gi|385199219|gb|AFI44988.1| bromodomain and PHD finger-containing protein, partial [Phlebotomus
           duboscqi]
          Length = 643

 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 48/79 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HPMD  T+  KL NGAY +L+  E D  L+  N + YN  DTI++R
Sbjct: 325 VDVNEVPDYTDIVKHPMDLSTMATKLKNGAYESLDDMEADFDLMIRNCLAYNNKDTIFYR 384

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+ +R+D
Sbjct: 385 AGARMRDQGGALFKAVRKD 403


>gi|62088012|dbj|BAD92453.1| bromodomain containing protein 1 variant [Homo sapiens]
          Length = 471

 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 188 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 247

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 248 RLRDQGGVVLRQARREVD 265


>gi|385199213|gb|AFI44985.1| bromodomain and PHD finger-containing protein, partial [Phlebotomus
           argentipes]
          Length = 630

 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 48/79 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HPMD  T+  KL NGAY +L+  E D  L+  N + YN  DTI++R
Sbjct: 325 VDVNEVPDYTDIVKHPMDLSTMATKLKNGAYESLDDMEADFDLMIRNCLAYNNKDTIFYR 384

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+ +R+D
Sbjct: 385 AGARMRDQGGALFKAVRKD 403


>gi|338718798|ref|XP_001491094.3| PREDICTED: bromodomain-containing protein 9 [Equus caballus]
          Length = 596

 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ +
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKL 229


>gi|296192082|ref|XP_002806615.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 1
           [Callithrix jacchus]
          Length = 1135

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 48/78 (61%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI +N M+YNA DT+++R A 
Sbjct: 540 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIANCMKYNARDTVFYRAAV 599

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 600 RLRDQGGVVLRQARREVD 617


>gi|313220722|emb|CBY31565.1| unnamed protein product [Oikopleura dioica]
          Length = 1280

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 50/79 (63%)

Query: 55  KMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF 114
           K DPE  PDY ++I+ PMD G++  K++N  YA+LE+   D+ L+C NA QYN P++  F
Sbjct: 385 KPDPEIYPDYYQIIKEPMDMGSIDRKISNNQYASLEELMHDISLMCKNAKQYNEPNSQVF 444

Query: 115 RQARSIHELAKKNFENLRQ 133
             A  + ++A+   + + Q
Sbjct: 445 IDANILEQVAQNKVKEICQ 463



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           ++ PDY E I  P+    +R K+  G Y  LEQ E D+ L+C+NA ++N   +  F  A 
Sbjct: 238 KQYPDYYEDITQPIALDKIRQKVIKGRYKNLEQMEDDIVLMCNNAREFNVEGSQIFMDAT 297

Query: 119 SIHELAK 125
            +  +A+
Sbjct: 298 LMMRVAR 304



 Score = 45.8 bits (107), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 30/45 (66%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQY 106
           P+Y ++IE+P+D  T++ K+ N  Y   + F+KDV L+  N+ +Y
Sbjct: 59  PEYFKIIENPIDLSTIQKKIRNDEYGDFDLFQKDVELLVDNSKKY 103


>gi|41053660|ref|NP_956569.1| bromodomain-containing protein 9 [Danio rerio]
 gi|82188456|sp|Q7ZUF2.1|BRD9_DANRE RecName: Full=Bromodomain-containing protein 9
 gi|29165688|gb|AAH49140.1| Bromodomain containing 9 [Danio rerio]
          Length = 631

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 12/112 (10%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T+++K+A   Y T+ +F+ D  L+C NAM YN P+T+Y++ A+   
Sbjct: 201 PGYSMIIKHPMDFSTMKDKIAANEYKTITEFKADFKLMCDNAMVYNRPETVYYKAAK--- 257

Query: 122 ELAKKNFENLRQDS-----DDNEPETKVVR----RGRPPTKNFKKPLGRPSL 164
           +L    F+ + + +     DD  PE  V          P K+ K+P+  P +
Sbjct: 258 KLLHTGFKMMSKQAAILGDDDIAPEEPVTEMMPIHTEYPKKSKKQPVKEPII 309


>gi|156382583|ref|XP_001632632.1| predicted protein [Nematostella vectensis]
 gi|156219691|gb|EDO40569.1| predicted protein [Nematostella vectensis]
          Length = 813

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 7/81 (8%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+ DY +VI+ PMDF T+R+++ +  Y T+EQFE D  LI  N M YNA DTIY+R
Sbjct: 629 VDTNEVLDYLDVIKQPMDFSTMRSRIDSNFYHTIEQFEADFNLIIENCMAYNAQDTIYYR 688

Query: 116 -------QARSIHELAKKNFE 129
                  Q R I   A++  E
Sbjct: 689 AALKLRDQGRPIIRAARRQIE 709


>gi|157120237|ref|XP_001653564.1| phd finger protein [Aedes aegypti]
 gi|108883077|gb|EAT47302.1| AAEL001554-PA [Aedes aegypti]
          Length = 1142

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 47/79 (59%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D EE+ DY ++I HPMD GT+R KL +G Y  +E  E D  L+ +N M YN  DT+++R
Sbjct: 629 VDTEEVADYLKIITHPMDLGTMRQKLKSGYYTNIEDLEADFTLMVTNCMTYNNKDTMFYR 688

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F  +R++
Sbjct: 689 AGVKMRDAGTIIFRTIRKE 707


>gi|119628593|gb|EAX08188.1| bromodomain containing 9, isoform CRA_b [Homo sapiens]
          Length = 288

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 55  PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 113


>gi|126296302|ref|XP_001371370.1| PREDICTED: bromodomain-containing protein 7 [Monodelphis domestica]
          Length = 653

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 53/80 (66%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ +++  L+CSNAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKENFKLMCSNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|444707868|gb|ELW49025.1| Bromodomain-containing protein 1 [Tupaia chinensis]
          Length = 872

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 46/78 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 422 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIVDNCMRYNAKDTVFYRAAV 481

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+  D
Sbjct: 482 RLRDQGGVVLRQARRQVD 499



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 44/76 (57%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A  +
Sbjct: 270 VPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIVDNCMRYNAKDTVFYRAAVRL 329

Query: 121 HELAKKNFENLRQDSD 136
            +         R+  D
Sbjct: 330 RDQGGVVLRQARRQVD 345


>gi|108707976|gb|ABF95771.1| Bromodomain containing protein, expressed [Oryza sativa Japonica
           Group]
          Length = 558

 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)

Query: 54  FKM-DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTI 112
           F M D  ++ DY E +  P DF T+R K  +G Y TLEQFE DV+++   AM  N+ DTI
Sbjct: 101 FAMPDDIQVTDYAERVNRPGDFATLRQKNKDGMYNTLEQFENDVYMVFQKAMSINSEDTI 160

Query: 113 YFRQARSIHELAKKNFENLRQDSDDNEPETKVVRR 147
            +R+A S+   AK+ F +L+ +   +E E    R+
Sbjct: 161 PYREAMSLLHQAKQVFLSLKSNQMYSESELAAWRQ 195


>gi|194378062|dbj|BAG63394.1| unnamed protein product [Homo sapiens]
          Length = 214

 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 55  PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 113


>gi|125586142|gb|EAZ26806.1| hypothetical protein OsJ_10717 [Oryza sativa Japonica Group]
          Length = 527

 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)

Query: 54  FKM-DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTI 112
           F M D  ++ DY E +  P DF T+R K  +G Y TLEQFE DV+++   AM  N+ DTI
Sbjct: 70  FAMPDDIQVTDYAERVNRPGDFATLRQKNKDGMYNTLEQFENDVYMVFQKAMSINSEDTI 129

Query: 113 YFRQARSIHELAKKNFENLRQDSDDNEPETKVVRR 147
            +R+A S+   AK+ F +L+ +   +E E    R+
Sbjct: 130 PYREAMSLLHQAKQVFLSLKSNQMYSESELAAWRQ 164


>gi|385199217|gb|AFI44987.1| bromodomain and PHD finger-containing protein, partial [Paramormia
           furcata]
          Length = 637

 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 48/79 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY EV++HPMD  T+R+KL +G Y  L+  E D  L+  N + YN  DT+Y+R
Sbjct: 304 VDITEVPDYTEVVKHPMDLSTMRHKLESGKYYNLDDMEADFDLMIRNCLAYNNRDTMYYR 363

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+N+R +
Sbjct: 364 AGIRMRDQCASLFKNVRDE 382


>gi|449015450|dbj|BAM78852.1| similar to GATA transcription factor areB gamma [Cyanidioschyzon
           merolae strain 10D]
          Length = 918

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 49/78 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DP  +P Y ++I+ PMD GT+R ++ + AY +  Q   D  L+  N  Q+N PD+I+++
Sbjct: 148 VDPVAVPAYLDIIKEPMDLGTIRQRIESAAYTSFSQVLHDCDLVWRNCFQFNPPDSIFYQ 207

Query: 116 QARSIHELAKKNFENLRQ 133
             ++  + A+K ++N R+
Sbjct: 208 AGKACKQEARKAWKNARE 225


>gi|395753574|ref|XP_003780458.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 1
           [Pongo abelii]
          Length = 1023

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 428 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 487

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 488 RLRDQGGVVLRQARREVD 505


>gi|395505890|ref|XP_003757270.1| PREDICTED: bromodomain-containing protein 7 [Sarcophilus harrisii]
          Length = 642

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+CSNAM YN P+TIY++ A+ + 
Sbjct: 156 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCSNAMIYNKPETIYYKAAKKLL 215

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 216 HSGMKILSQERIQSLKQSID 235


>gi|125543738|gb|EAY89877.1| hypothetical protein OsI_11421 [Oryza sativa Indica Group]
          Length = 558

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 1/89 (1%)

Query: 54  FKM-DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTI 112
           F M D  ++ DY E +  P DF T+R K  +G Y TLEQFE DV+++   AM  N+ DTI
Sbjct: 101 FAMPDDIQVTDYAERVNRPGDFATLRQKNKDGMYNTLEQFENDVYMVFQKAMSINSEDTI 160

Query: 113 YFRQARSIHELAKKNFENLRQDSDDNEPE 141
            +R+A S+   AK+ F +L+ +   +E E
Sbjct: 161 PYREAMSLLHQAKQVFLSLKSNQMYSESE 189


>gi|395819556|ref|XP_003783148.1| PREDICTED: bromodomain-containing protein 1 isoform 1 [Otolemur
           garnettii]
          Length = 1189

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIVDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+ +D
Sbjct: 654 RLRDQGGVVLRQARRQAD 671


>gi|332028774|gb|EGI68803.1| Bromodomain-containing protein 7 [Acromyrmex echinatior]
          Length = 792

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 2/74 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y ++I +PMDF T++ K+ +  Y  L++F  D  L+C NAM YN PDTIY++ A+ + 
Sbjct: 192 PGYSQIITNPMDFSTIKQKIDDNNYQNLQEFVDDFKLMCDNAMTYNHPDTIYYKAAKKLL 251

Query: 122 ELAKKNF--ENLRQ 133
            +  K    E LRQ
Sbjct: 252 HVGLKMVTPEKLRQ 265


>gi|385199155|gb|AFI44956.1| bromodomain and PHD finger-containing protein, partial
           [Neotelmatoscopus aurulentus]
          Length = 788

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 47/79 (59%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D +E+PDY E+++HPMD  T+R KL  G Y  L+  E D  L+  N + YN  DT+Y+R
Sbjct: 350 VDVDEVPDYTEIVKHPMDLSTMRTKLECGKYYNLDDLEADFDLMIRNCLAYNNRDTMYYR 409

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+ +R+D
Sbjct: 410 AGLRMRDQCVSVFKGVRED 428


>gi|391346978|ref|XP_003747742.1| PREDICTED: uncharacterized protein LOC100908892 [Metaseiulus
           occidentalis]
          Length = 900

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 42/67 (62%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+ PMD  T+R KL +  Y +L  F  DV LIC NA QYNA DTIY+++A+ + 
Sbjct: 274 PGYSSIIQSPMDLSTMRRKLEHLEYKSLTDFRADVKLICDNACQYNAADTIYYKEAKKLW 333

Query: 122 ELAKKNF 128
              +K F
Sbjct: 334 RKVQKLF 340


>gi|71023893|ref|XP_762176.1| hypothetical protein UM06029.1 [Ustilago maydis 521]
 gi|46101634|gb|EAK86867.1| hypothetical protein UM06029.1 [Ustilago maydis 521]
          Length = 1227

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 50/72 (69%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           ++PDY ++++ PMD+ T+++K+A+ AY T+E+  +DV +I +NAM YN  DT Y + A  
Sbjct: 573 DVPDYYDIVKDPMDWATIKDKIAHKAYDTVEEIRQDVLMIATNAMTYNKADTPYHKAASK 632

Query: 120 IHELAKKNFENL 131
           I ++  + F+ L
Sbjct: 633 ILKMIPEVFKEL 644


>gi|344308468|ref|XP_003422899.1| PREDICTED: bromodomain-containing protein 1 [Loxodonta africana]
          Length = 1059

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 41/59 (69%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           +E+PDY + I HPMDF T+R +L    Y TL +FE+D  LI  N M+YNA DT+++R A
Sbjct: 594 KEVPDYLDHITHPMDFATMRKRLEAQGYRTLTEFEEDFNLIVDNCMKYNAKDTVFYRAA 652


>gi|119628598|gb|EAX08193.1| bromodomain containing 9, isoform CRA_g [Homo sapiens]
          Length = 233

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 55  PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 113


>gi|10436770|dbj|BAB14907.1| unnamed protein product [Homo sapiens]
          Length = 233

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 55  PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 113


>gi|354500788|ref|XP_003512479.1| PREDICTED: bromodomain-containing protein 1-like [Cricetulus
           griseus]
          Length = 1189

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 47/79 (59%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L  FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHAFEEDFNLIVDNCMKYNAKDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSDD 137
            + +         R++ D+
Sbjct: 654 RLRDQGGVVLRQARREVDN 672


>gi|385199163|gb|AFI44960.1| bromodomain and PHD finger-containing protein, partial [Maruina
           lanceolata]
          Length = 746

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 48/79 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HPMD  T+R KL +  Y++L+  E D  L+  N + YN  DT+Y+R
Sbjct: 314 VDVNEVPDYADIVKHPMDLSTMRYKLESRVYSSLDDLEADFDLMIRNCLAYNNRDTMYYR 373

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+N RQD
Sbjct: 374 AGVRMRDQCASLFKNYRQD 392


>gi|403282766|ref|XP_003932810.1| PREDICTED: bromodomain-containing protein 1 [Saimiri boliviensis
           boliviensis]
          Length = 1189

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|395819558|ref|XP_003783149.1| PREDICTED: bromodomain-containing protein 1 isoform 2 [Otolemur
           garnettii]
          Length = 1058

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIVDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+ +D
Sbjct: 654 RLRDQGGVVLRQARRQAD 671


>gi|119593879|gb|EAW73473.1| bromodomain containing 1, isoform CRA_a [Homo sapiens]
 gi|119593883|gb|EAW73477.1| bromodomain containing 1, isoform CRA_a [Homo sapiens]
 gi|158258288|dbj|BAF85117.1| unnamed protein product [Homo sapiens]
          Length = 1189

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|28704033|gb|AAH47508.1| BRD1 protein [Homo sapiens]
 gi|45708802|gb|AAH30007.1| BRD1 protein [Homo sapiens]
          Length = 1189

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|345322794|ref|XP_001505961.2| PREDICTED: bromodomain-containing protein 1 [Ornithorhynchus
           anatinus]
          Length = 1087

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 4/93 (4%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 622 KEVPDYLDHIKHPMDFSTMRKRLEAQGYRNLNEFEEDFNLIIDNCMKYNAKDTLFYRAAV 681

Query: 119 SIHELAKKNFENLRQDSD----DNEPETKVVRR 147
            + +         R+ +D    DN+  T +  R
Sbjct: 682 RLRDQGGVVLRQTRRHADGIGFDNQTGTHLAER 714


>gi|397479577|ref|XP_003811089.1| PREDICTED: bromodomain-containing protein 1 isoform 1 [Pan
           paniscus]
          Length = 1189

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|260798747|ref|XP_002594361.1| hypothetical protein BRAFLDRAFT_114040 [Branchiostoma floridae]
 gi|229279595|gb|EEN50372.1| hypothetical protein BRAFLDRAFT_114040 [Branchiostoma floridae]
          Length = 962

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 40/59 (67%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           +E+PDY E I+ PMDF T+R K+    Y TL+ FE+D  LI  N M YNA DTI++R A
Sbjct: 644 DEVPDYLEYIKEPMDFATMRIKVEGHQYRTLDDFERDFELIIKNCMTYNAKDTIFYRAA 702


>gi|344253251|gb|EGW09355.1| Bromodomain-containing protein 1 [Cricetulus griseus]
          Length = 1151

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 47/79 (59%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L  FE+D  LI  N M+YNA DT+++R A 
Sbjct: 556 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHAFEEDFNLIVDNCMKYNAKDTVFYRAAV 615

Query: 119 SIHELAKKNFENLRQDSDD 137
            + +         R++ D+
Sbjct: 616 RLRDQGGVVLRQARREVDN 634


>gi|194753570|ref|XP_001959085.1| GF12236 [Drosophila ananassae]
 gi|190620383|gb|EDV35907.1| GF12236 [Drosophila ananassae]
          Length = 1431

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 49/79 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HPMD GT+R +L +  Y +LEQ E D  L+  N + YN  DT+++R
Sbjct: 645 VDIGEVPDYTDIVKHPMDLGTMRKRLKDCQYTSLEQLEADFDLMIQNCLAYNNKDTVFYR 704

Query: 116 QARSIHELAKKNFENLRQD 134
               + + A   F  +R++
Sbjct: 705 AGIRMRDQAAPLFVQVRKE 723


>gi|322788584|gb|EFZ14212.1| hypothetical protein SINV_13915 [Solenopsis invicta]
          Length = 790

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y ++I +PMDF T++ K+    Y  L++F  D  L+C NAM YN PDTIY++ A+ + 
Sbjct: 191 PGYSQIITNPMDFSTIKQKIDENNYQNLQEFVDDFKLMCDNAMTYNHPDTIYYKAAKKLL 250

Query: 122 ELAKKNF--ENLRQ 133
            +  K    E LRQ
Sbjct: 251 HVGLKMVTPEKLRQ 264


>gi|194388294|dbj|BAG65531.1| unnamed protein product [Homo sapiens]
          Length = 995

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|440910380|gb|ELR60182.1| Bromodomain and PHD finger-containing protein 3 [Bos grunniens
           mutus]
          Length = 1206

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 2/97 (2%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           +Y E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  + +
Sbjct: 625 NYLEFISKPMDFSTMRRKLESHLYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRD 684

Query: 123 LAKKNFENLRQDSDD--NEPETKVVRRGRPPTKNFKK 157
           L      + R+ +++   +PET       P +++F +
Sbjct: 685 LGGAILRHARRQAENIGYDPETGTHLPESPKSEDFYR 721


>gi|405962579|gb|EKC28243.1| Peregrin [Crassostrea gigas]
          Length = 1329

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 43/64 (67%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY E I+ PMDF T+R  + N  Y T+++FE D  LI  N M+YNA DT+++R A 
Sbjct: 641 DEVPDYLEYIDKPMDFETMRKNIDNHKYRTMDEFETDFELIIKNCMKYNAKDTVFYRAAT 700

Query: 119 SIHE 122
            + +
Sbjct: 701 RLRD 704


>gi|409041309|gb|EKM50795.1| hypothetical protein PHACADRAFT_213668 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 1307

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 46/72 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           ++PDY +VI+ PM +  +  KL    Y  L++F+ D++L+ +NAM YN P+T YFR AR 
Sbjct: 491 DVPDYYDVIKRPMSWSVIDKKLTEHQYVDLQEFKDDIYLVLNNAMLYNKPETAYFRAARR 550

Query: 120 IHELAKKNFENL 131
           I   A++   +L
Sbjct: 551 IKTAAERALPDL 562


>gi|327280562|ref|XP_003225021.1| PREDICTED: bromodomain-containing protein 1-like isoform 2 [Anolis
           carolinensis]
          Length = 1185

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D   I  N M+YNA DTI++R A 
Sbjct: 593 KEVPDYLDHIKHPMDFSTMRERLDGQGYKNLSEFEEDFNFIIDNCMKYNAKDTIFYRAAV 652

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+D++
Sbjct: 653 RLRDQGGVVLRQARRDAE 670


>gi|11321642|ref|NP_055392.1| bromodomain-containing protein 1 [Homo sapiens]
 gi|12229697|sp|O95696.1|BRD1_HUMAN RecName: Full=Bromodomain-containing protein 1; AltName:
           Full=BR140-like protein; AltName: Full=Bromodomain and
           PHD finger-containing protein 2
 gi|6979019|gb|AAF34320.1|AF005067_1 BRL [Homo sapiens]
 gi|47678347|emb|CAG30294.1| BRD1 [Homo sapiens]
 gi|109451076|emb|CAK54399.1| BRD1 [synthetic construct]
 gi|109451654|emb|CAK54698.1| BRD1 [synthetic construct]
 gi|119593880|gb|EAW73474.1| bromodomain containing 1, isoform CRA_b [Homo sapiens]
 gi|119593881|gb|EAW73475.1| bromodomain containing 1, isoform CRA_b [Homo sapiens]
 gi|119593882|gb|EAW73476.1| bromodomain containing 1, isoform CRA_b [Homo sapiens]
 gi|208967665|dbj|BAG72478.1| bromodomain containing 1 [synthetic construct]
          Length = 1058

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|385199221|gb|AFI44989.1| bromodomain and PHD finger-containing protein, partial
           [Perithreticus bishoppi]
          Length = 526

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 49/82 (59%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY E+++HPMD  T+  KL +G Y TL+  E D  L+  N + YN  DT+Y+R
Sbjct: 323 VDINEVPDYTEIVKHPMDLSTMATKLDSGMYYTLDDLEADFDLMIRNCLAYNNRDTMYYR 382

Query: 116 QARSIHELAKKNFENLRQDSDD 137
               + +     F++LRQ  ++
Sbjct: 383 AGVRMRDQCAVLFKDLRQQLEE 404


>gi|307208501|gb|EFN85852.1| Bromodomain-containing protein 7 [Harpegnathos saltator]
          Length = 801

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 13/100 (13%)

Query: 36  DPQRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKD 95
           DPQ+ +   ++  + SI         P Y ++I +PMDF T++ K+ +  Y  L +F  D
Sbjct: 190 DPQQFF---AWPVTDSI--------APGYSQIITNPMDFSTIKQKIDDNNYQNLNEFVDD 238

Query: 96  VFLICSNAMQYNAPDTIYFRQARSIHELAKKNF--ENLRQ 133
             L+C NAM YN PDTIY++ A+ +  +  K    E LRQ
Sbjct: 239 FKLMCDNAMTYNHPDTIYYKAAKKLLHVGLKMVLPEKLRQ 278


>gi|332263469|ref|XP_003280772.1| PREDICTED: bromodomain-containing protein 1 isoform 2 [Nomascus
           leucogenys]
 gi|332263471|ref|XP_003280773.1| PREDICTED: bromodomain-containing protein 1 isoform 3 [Nomascus
           leucogenys]
          Length = 1058

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|281339503|gb|EFB15087.1| hypothetical protein PANDA_005496 [Ailuropoda melanoleuca]
          Length = 1180

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 585 KEVPDYLDHIKHPMDFATMRKRLEAQGYRHLTEFEEDFNLIVDNCMKYNAKDTVFYRAAV 644

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+ +D
Sbjct: 645 RLRDQGGVVLRQARRQAD 662


>gi|397479579|ref|XP_003811090.1| PREDICTED: bromodomain-containing protein 1 isoform 2 [Pan
           paniscus]
 gi|397479581|ref|XP_003811091.1| PREDICTED: bromodomain-containing protein 1 isoform 3 [Pan
           paniscus]
 gi|410207528|gb|JAA00983.1| bromodomain containing 1 [Pan troglodytes]
          Length = 1058

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|332860112|ref|XP_001139189.2| PREDICTED: bromodomain-containing protein 1 isoform 1 [Pan
           troglodytes]
          Length = 1060

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|385199175|gb|AFI44966.1| bromodomain and PHD finger-containing protein, partial [Horaiella
           iota]
          Length = 598

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 30/171 (17%)

Query: 7   LAVLTVKRERRLFLVRIQ--QITTKGLSWNWDPQRLYQIKSYCCSSSIDFKM--DPEELP 62
           L VL +K E +  L+++   + T K L    D +           SS  FK+  D  E+P
Sbjct: 229 LKVLFIKTEEQRVLLQLHPMEFTMKKLLDTLDLK----------DSSEIFKLPVDVTEVP 278

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR------- 115
           DY ++++HPMD  T+R KL +G+Y  ++  E D  L+  N + YN  DT+Y+R       
Sbjct: 279 DYTDIVKHPMDLSTMRQKLESGSYFNVDDMEADFNLMIRNCLAYNNRDTMYYRAGVRMRD 338

Query: 116 QARSIHELAKKNFEN---LRQDSDDN------EPETKVVRRGRPPTKNFKK 157
           Q   + + A+K  EN   +++   D+      E E K++ +  P  KN  K
Sbjct: 339 QGNLLFKQARKELENEGLIKEKKTDDIFAKEIEEEFKLLAQEAPSEKNLVK 389


>gi|291415533|ref|XP_002724008.1| PREDICTED: bromodomain containing protein 1, partial [Oryctolagus
           cuniculus]
          Length = 821

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 48/78 (61%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y +L +FE+D  LI  N ++YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYQSLHEFEEDFNLIVDNCLKYNAKDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGAVLRQARREVD 671


>gi|440790084|gb|ELR11372.1| Bromodomain containing protein [Acanthamoeba castellanii str. Neff]
          Length = 844

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 9/89 (10%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY +VI+HPMD GT++ +L +G+Y T E+F +DV L+ +N   YN P +     A ++
Sbjct: 171 IPDYFDVIKHPMDLGTIKEQLDSGSYETEEEFAEDVRLVFTNTFTYNQPGSDIVVMASTL 230

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR 149
             L  + FE L+          K+  RGR
Sbjct: 231 SSLFNEKFEILK---------AKIEERGR 250


>gi|327280560|ref|XP_003225020.1| PREDICTED: bromodomain-containing protein 1-like isoform 1 [Anolis
           carolinensis]
          Length = 1057

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D   I  N M+YNA DTI++R A 
Sbjct: 593 KEVPDYLDHIKHPMDFSTMRERLDGQGYKNLSEFEEDFNFIIDNCMKYNAKDTIFYRAAV 652

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+D++
Sbjct: 653 RLRDQGGVVLRQARRDAE 670


>gi|301763737|ref|XP_002917303.1| PREDICTED: bromodomain-containing protein 1-like [Ailuropoda
           melanoleuca]
          Length = 1061

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 597 KEVPDYLDHIKHPMDFATMRKRLEAQGYRHLTEFEEDFNLIVDNCMKYNAKDTVFYRAAV 656

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+ +D
Sbjct: 657 RLRDQGGVVLRQARRQAD 674


>gi|123454432|ref|XP_001314971.1| Bromodomain containing protein [Trichomonas vaginalis G3]
 gi|121897633|gb|EAY02748.1| Bromodomain containing protein [Trichomonas vaginalis G3]
          Length = 290

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 4/122 (3%)

Query: 40  LYQIKSYCCSSSIDFKMDPEE--LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           L ++  Y  S+     +DPE    P+Y E+I+ PMD GTVR KL N  Y T++  + DV 
Sbjct: 14  LDKVAEYHISAMFAIPVDPERDGCPNYLEIIKTPMDLGTVRKKLLNNEYNTVQDCKNDVA 73

Query: 98  LICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQD--SDDNEPETKVVRRGRPPTKNF 155
           LI  N +++N  +TI F  A+ + ++ K+N + L  D  +D ++  T++  R      NF
Sbjct: 74  LIWENTIKFNGQNTIIFFLAKQLEKVFKENTDWLSGDDYTDWHKKCTEIKARNAATKVNF 133

Query: 156 KK 157
           +K
Sbjct: 134 EK 135


>gi|391341329|ref|XP_003744983.1| PREDICTED: peregrin-like [Metaseiulus occidentalis]
          Length = 1588

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 20/134 (14%)

Query: 12  VKRERRLFLVRIQQITTK-----GLSWNWDPQRLYQIKSYCCSSSIDFKMDPEELPDYCE 66
           VK   R+FL  I  +         L    DP+R++              +D  E+PDY  
Sbjct: 755 VKIRERVFLTEISPLVKVLNELINLLQEKDPRRIFA-----------EPVDCSEVPDYPT 803

Query: 67  VIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE---- 122
           +I+ PMDF T+R K  +  YA+  +FEKD  LI SN M YNA DTI+++ A  + +    
Sbjct: 804 LIKQPMDFSTMRTKANSLEYASFHEFEKDFQLIVSNCMTYNAKDTIFYKAAIKLRDQGGA 863

Query: 123 LAKKNFENLRQDSD 136
           + + + ENL  + D
Sbjct: 864 IIRSHRENLTVNYD 877


>gi|195380253|ref|XP_002048885.1| GJ21285 [Drosophila virilis]
 gi|194143682|gb|EDW60078.1| GJ21285 [Drosophila virilis]
          Length = 1443

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 47/79 (59%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++ PMD GT+R KL +  Y  LEQ E D  L+  N + YN  DT+++R
Sbjct: 624 VDTSEVPDYMDIVKQPMDLGTMRTKLKDCKYTKLEQLEADFDLMIQNCLAYNNKDTVFYR 683

Query: 116 QARSIHELAKKNFENLRQD 134
               + + A   F  LR++
Sbjct: 684 AGIRMRDQAAPLFVQLRKE 702


>gi|60359878|dbj|BAD90158.1| mKIAA4191 protein [Mus musculus]
          Length = 931

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 40/59 (67%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           +E+PDY + I+HPMDF T+R +L    Y  L  FE+D  LI  N M+YNA DT+++R A
Sbjct: 336 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHAFEEDFNLIVDNCMKYNAKDTVFYRAA 394


>gi|390594432|gb|EIN03843.1| hypothetical protein PUNSTDRAFT_146824 [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 1177

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 13/113 (11%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           ++PDY EVIE PM +  + NKL    Y  ++ F++D+ L+  NA +YNAPD++++R A  
Sbjct: 485 DVPDYFEVIEKPMCWTWIENKLDRHGYWDVQSFKEDILLVLDNAKKYNAPDSLFYRTASR 544

Query: 120 IHELAKKNFENL-RQDSD----------DNEPETKVVRR--GRPPTKNFKKPL 159
           IH  A     NL R +S+          D EPE  VV       P K  K+ L
Sbjct: 545 IHTHAISILSNLDRPNSEAAAIDDRTVGDLEPEMDVVEMLLAEQPDKGIKEEL 597


>gi|73968871|ref|XP_538319.2| PREDICTED: bromodomain-containing protein 1 isoform 5 [Canis lupus
           familiaris]
          Length = 1058

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYRHLTEFEEDFNLIVDNCMKYNAKDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+ +D
Sbjct: 654 RLRDQGGVVLRQARRQAD 671


>gi|157821857|ref|NP_001101573.1| bromodomain-containing protein 1 [Rattus norvegicus]
 gi|149017511|gb|EDL76515.1| bromodomain containing 1 (predicted) [Rattus norvegicus]
          Length = 1058

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 46/78 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L  FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHAFEEDFNLIVDNCMKYNAKDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|432908501|ref|XP_004077892.1| PREDICTED: bromodomain-containing protein 9-like [Oryzias latipes]
          Length = 649

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDF T+++K+ N  Y T+ +F+ D  L+C NAM YN P+T+Y++ A+ +
Sbjct: 212 PGYSMIIKHPMDFSTMKDKIRNNEYNTVTEFKADFKLMCDNAMVYNRPETVYYKAAKKL 270


>gi|410965850|ref|XP_003989453.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 1
           [Felis catus]
          Length = 1058

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYRHLTEFEEDFNLIVDNCMKYNAKDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+ +D
Sbjct: 654 RLRDQGGVVLRQARRQAD 671


>gi|255308916|ref|NP_001157300.1| bromodomain-containing protein 1 [Equus caballus]
          Length = 1058

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 41/59 (69%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLTEFEEDFNLIVDNCMKYNAKDTVFYRAA 652


>gi|444725564|gb|ELW66128.1| Bromodomain and PHD finger-containing protein 3 [Tupaia chinensis]
          Length = 1330

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 2/97 (2%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           +Y E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  + +
Sbjct: 750 NYLEFISKPMDFSTMRRKLESHLYCTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRD 809

Query: 123 LAKKNFENLRQDSDD--NEPETKVVRRGRPPTKNFKK 157
           L      + R+ +++   +PE        P  K+F +
Sbjct: 810 LGGAILRHARRQAENIGYDPERGTHLPESPKLKDFYR 846


>gi|385199203|gb|AFI44980.1| bromodomain and PHD finger-containing protein, partial [Mormia sp.
           nov. Thailand]
          Length = 651

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 46/79 (58%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY E+++HPMD  T++NKL  G Y  L+  E D  L+  N + YN  DT+Y+R
Sbjct: 316 VDISEVPDYTEIVKHPMDLSTMKNKLDAGKYYNLDDMEADFDLMIRNCLAYNNRDTMYYR 375

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F ++R D
Sbjct: 376 AGVRMRDQCAHLFRSVRDD 394


>gi|348551616|ref|XP_003461626.1| PREDICTED: bromodomain-containing protein 1-like isoform 2 [Cavia
           porcellus]
          Length = 1189

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 40/59 (67%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           +E+PDY + I+HPMDF T+R +L    Y  L  FE+D  LI  N M+YNA DT+++R A
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYRNLRAFEEDFTLIVDNCMKYNAKDTVFYRAA 652


>gi|385199197|gb|AFI44977.1| bromodomain and PHD finger-containing protein, partial
           [Telmatoscopus superbus]
          Length = 549

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 50/79 (63%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HPMD  T+R+KL +G Y  L+  E D  L+  N ++YN  DT+Y+R
Sbjct: 342 VDITEVPDYTDIVKHPMDLSTMRHKLESGKYYNLDDLEADFDLMIRNCLEYNNKDTMYYR 401

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+++R++
Sbjct: 402 AGVRMRDQCASLFKSIRKE 420


>gi|354474674|ref|XP_003499555.1| PREDICTED: bromodomain-containing protein 7 [Cricetulus griseus]
          Length = 671

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 186 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 245

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 246 HSGMKILSQERIQSLKQSID 265


>gi|164698417|ref|NP_001028446.2| bromodomain containing 1 [Mus musculus]
          Length = 1189

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 40/59 (67%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           +E+PDY + I+HPMDF T+R +L    Y  L  FE+D  LI  N M+YNA DT+++R A
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHAFEEDFNLIVDNCMKYNAKDTVFYRAA 652


>gi|291410207|ref|XP_002721393.1| PREDICTED: bromodomain containing 7 [Oryctolagus cuniculus]
          Length = 651

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|426243518|ref|XP_004015601.1| PREDICTED: bromodomain-containing protein 7 [Ovis aries]
          Length = 658

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 173 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 232

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 233 HSGMKILSQERIQSLKQSID 252


>gi|75041538|sp|Q5R8B0.1|BRD7_PONAB RecName: Full=Bromodomain-containing protein 7
 gi|55730557|emb|CAH92000.1| hypothetical protein [Pongo abelii]
          Length = 651

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|432109745|gb|ELK33804.1| Bromodomain and PHD finger-containing protein 3, partial [Myotis
           davidii]
          Length = 1185

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 47/75 (62%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           +Y E I  PMDF T+R KL +  Y TLE+FE+D  LI SN M+YNA DTI+ R A  + +
Sbjct: 605 NYLEFISKPMDFSTMRRKLESHLYHTLEEFEEDFNLIVSNCMKYNAKDTIFHRAAVRLRD 664

Query: 123 LAKKNFENLRQDSDD 137
           L      + R+ +++
Sbjct: 665 LGGAILRHARRQAEN 679


>gi|426382143|ref|XP_004065333.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 7
           [Gorilla gorilla gorilla]
          Length = 657

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|348551614|ref|XP_003461625.1| PREDICTED: bromodomain-containing protein 1-like isoform 1 [Cavia
           porcellus]
          Length = 1057

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 40/59 (67%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           +E+PDY + I+HPMDF T+R +L    Y  L  FE+D  LI  N M+YNA DT+++R A
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYRNLRAFEEDFTLIVDNCMKYNAKDTVFYRAA 652


>gi|390477690|ref|XP_002760983.2| PREDICTED: bromodomain-containing protein 7 isoform 1 [Callithrix
           jacchus]
          Length = 693

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 207 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 266

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 267 HSGMKILSQERIQSLKQSID 286


>gi|403292560|ref|XP_003937309.1| PREDICTED: bromodomain-containing protein 7 [Saimiri boliviensis
           boliviensis]
          Length = 652

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|332845882|ref|XP_003315142.1| PREDICTED: bromodomain-containing protein 7 isoform 1 [Pan
           troglodytes]
 gi|410208246|gb|JAA01342.1| bromodomain containing 7 [Pan troglodytes]
 gi|410260668|gb|JAA18300.1| bromodomain containing 7 [Pan troglodytes]
 gi|410292898|gb|JAA25049.1| bromodomain containing 7 [Pan troglodytes]
 gi|410354401|gb|JAA43804.1| bromodomain containing 7 [Pan troglodytes]
          Length = 651

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|440900203|gb|ELR51391.1| Bromodomain-containing protein 7 [Bos grunniens mutus]
          Length = 651

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|6755234|ref|NP_036177.1| bromodomain-containing protein 7 [Mus musculus]
 gi|81861523|sp|O88665.1|BRD7_MOUSE RecName: Full=Bromodomain-containing protein 7; AltName: Full=75
           kDa bromodomain protein
 gi|3493162|gb|AAC33302.1| bromodomain-containing protein BP75 [Mus musculus]
 gi|183396869|gb|AAI66008.1| Bromodomain containing 7 [synthetic construct]
          Length = 651

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|321477786|gb|EFX88744.1| hypothetical protein DAPPUDRAFT_191336 [Daphnia pulex]
          Length = 373

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 41/59 (69%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P+Y  +I  PMDF T++ K+ +  Y TL++F  D  L+C+NAM YN PDT+Y++ A+ +
Sbjct: 23  PNYSSIITKPMDFSTMKQKIEDNQYKTLQEFTDDFVLMCNNAMTYNQPDTVYYKAAKRL 81


>gi|297283975|ref|XP_002802517.1| PREDICTED: bromodomain-containing protein 7 isoform 2 [Macaca
           mulatta]
 gi|297283977|ref|XP_002802518.1| PREDICTED: bromodomain-containing protein 7 isoform 3 [Macaca
           mulatta]
          Length = 651

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|291219913|ref|NP_001167455.1| bromodomain-containing protein 7 isoform 1 [Homo sapiens]
 gi|261858228|dbj|BAI45636.1| bromodomain containing 7 [synthetic construct]
          Length = 652

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|395839411|ref|XP_003792583.1| PREDICTED: bromodomain-containing protein 7 [Otolemur garnettii]
          Length = 653

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|109128468|ref|XP_001083389.1| PREDICTED: bromodomain-containing protein 7 isoform 1 [Macaca
           mulatta]
          Length = 652

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|6626179|gb|AAF19526.1| bromodomain protein CELTIX1 [Homo sapiens]
          Length = 652

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|402908344|ref|XP_003916910.1| PREDICTED: bromodomain-containing protein 7 [Papio anubis]
          Length = 652

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|41350212|ref|NP_037395.2| bromodomain-containing protein 7 isoform 2 [Homo sapiens]
 gi|74734307|sp|Q9NPI1.1|BRD7_HUMAN RecName: Full=Bromodomain-containing protein 7; AltName: Full=75
           kDa bromodomain protein; AltName: Full=Protein CELTIX-1
 gi|6966969|emb|CAB72445.1| bromodomain containing protein [Homo sapiens]
 gi|8452874|gb|AAF75126.1| bromodomain-containing protein [Homo sapiens]
 gi|29791872|gb|AAH50728.1| Bromodomain containing 7 [Homo sapiens]
          Length = 651

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|82595866|ref|XP_726025.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
 gi|23481259|gb|EAA17590.1| synthetic antigen of P.falciparum, putative [Plasmodium yoelii
           yoelii]
          Length = 627

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 29/159 (18%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY-- 113
           ++ + +PDY  +I+ PMDF T++ K+ N  Y T E+FE+D+FLI +N   YN   TIY  
Sbjct: 41  VNVQYVPDYLNIIKEPMDFTTMKQKIQNFKYNTYEEFERDIFLIINNCYTYNDKTTIYHK 100

Query: 114 ----------------FRQARSIHELAKKNFENLRQD-------SDDNEPETKVVRRGRP 150
                           +R+  +IH L     +NL           D+N    K  ++G  
Sbjct: 101 IAESLEAYYRKLSVKMYRKYMNIHLLYHNEDKNLVNKLLYNTNIKDENINTIKDNKKGIK 160

Query: 151 PTKNFKKPLGRPSLERARSDFSSDVTLASGAENTALTNR 189
           P K+ K  +GRPS  +A  DF +     +   N  ++ R
Sbjct: 161 PKKHGK--VGRPS--KANMDFRNSQINDTNINNANMSKR 195


>gi|384943336|gb|AFI35273.1| bromodomain-containing protein 7 isoform 2 [Macaca mulatta]
          Length = 651

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|241913468|pdb|3HME|A Chain A, Crystal Structure Of Human Bromodomain Containing 9
           Isoform 1 (Brd9)
 gi|241913469|pdb|3HME|B Chain B, Crystal Structure Of Human Bromodomain Containing 9
           Isoform 1 (Brd9)
          Length = 123

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 44  PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 102


>gi|383413859|gb|AFH30143.1| bromodomain-containing protein 7 isoform 1 [Macaca mulatta]
          Length = 652

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|338723323|ref|XP_001491826.3| PREDICTED: bromodomain-containing protein 7 [Equus caballus]
          Length = 641

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 156 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 215

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 216 HSGMKILSQERIQSLKQSID 235


>gi|380812098|gb|AFE77924.1| bromodomain-containing protein 7 isoform 2 [Macaca mulatta]
          Length = 652

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|148672454|gb|EDL04401.1| mCG7283 [Mus musculus]
          Length = 1058

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 40/59 (67%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           +E+PDY + I+HPMDF T+R +L    Y  L  FE+D  LI  N M+YNA DT+++R A
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHAFEEDFNLIVDNCMKYNAKDTVFYRAA 652


>gi|118601176|ref|NP_001073031.1| bromodomain containing 1 [Xenopus (Silurana) tropicalis]
 gi|112418528|gb|AAI21943.1| bromodomain containing 1 [Xenopus (Silurana) tropicalis]
          Length = 1185

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 41/58 (70%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           E+PDY + I+HPMDF T++ +L +  Y  L +FE+D  LI  N M+YNA DTI++R A
Sbjct: 594 EVPDYLDHIKHPMDFSTMKKRLEDQRYRNLNEFEEDFNLIIENCMKYNAKDTIFYRAA 651


>gi|351700583|gb|EHB03502.1| Bromodomain-containing protein 1 [Heterocephalus glaber]
          Length = 1121

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 40/59 (67%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           +E+PDY + I+HPMDF T+R +L    Y  L  FE+D  LI  N M+YNA DT+++R A
Sbjct: 525 KEVPDYLDHIKHPMDFATMRKRLEAQGYRNLRAFEEDFNLIVDNCMKYNAKDTVFYRAA 583


>gi|157074038|ref|NP_001096730.1| bromodomain-containing protein 7 [Bos taurus]
 gi|151554612|gb|AAI47948.1| BRD7 protein [Bos taurus]
 gi|296477980|tpg|DAA20095.1| TPA: bromodomain containing 7 [Bos taurus]
          Length = 651

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|385199169|gb|AFI44963.1| bromodomain and PHD finger-containing protein, partial [Threticus
           bicolor]
          Length = 778

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 47/79 (59%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D +E+PDY ++++HPMD  T+R+KL  G Y TL+  E D  L+  N + YN  DT+Y+R
Sbjct: 323 VDVDEVPDYTDIVKHPMDLSTMRDKLETGMYYTLDDLEADFDLMIRNCLAYNNRDTMYYR 382

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+  R +
Sbjct: 383 AGVRMRDQCAVLFKQTRNE 401


>gi|194380372|dbj|BAG63953.1| unnamed protein product [Homo sapiens]
          Length = 746

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 45/76 (59%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A  +
Sbjct: 284 VPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAVRL 343

Query: 121 HELAKKNFENLRQDSD 136
            +         R++ D
Sbjct: 344 RDQGGVVLRQARREVD 359


>gi|74204110|dbj|BAE29043.1| unnamed protein product [Mus musculus]
          Length = 867

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 40/59 (67%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           +E+PDY + I+HPMDF T+R +L    Y  L  FE+D  LI  N M+YNA DT+++R A
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHAFEEDFNLIVDNCMKYNAKDTVFYRAA 652


>gi|195027718|ref|XP_001986729.1| GH20368 [Drosophila grimshawi]
 gi|193902729|gb|EDW01596.1| GH20368 [Drosophila grimshawi]
          Length = 1441

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 48/79 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++ PMD GT+R +L +  Y+ LEQ E D  L+  N + YN  DT+++R
Sbjct: 631 VDTSEVPDYMDIVKQPMDLGTMRTRLKDCKYSRLEQLEADFDLMIQNCLAYNNKDTVFYR 690

Query: 116 QARSIHELAKKNFENLRQD 134
               + + A   F  LR++
Sbjct: 691 AGIRMRDQAAPLFVQLRKE 709


>gi|119603165|gb|EAW82759.1| bromodomain containing 7, isoform CRA_c [Homo sapiens]
          Length = 509

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 23  PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 82

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 83  HSGMKILSQERIQSLKQSID 102


>gi|297698713|ref|XP_002826456.1| PREDICTED: bromodomain-containing protein 7 [Pongo abelii]
          Length = 508

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 23  PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 82

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 83  HSGMKILSQERIQSLKQSID 102


>gi|397498161|ref|XP_003819860.1| PREDICTED: bromodomain-containing protein 7 isoform 1 [Pan
           paniscus]
 gi|397498163|ref|XP_003819861.1| PREDICTED: bromodomain-containing protein 7 isoform 2 [Pan
           paniscus]
          Length = 508

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 23  PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 82

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 83  HSGMKILSQERIQSLKQSID 102


>gi|332227817|ref|XP_003263086.1| PREDICTED: bromodomain-containing protein 7 isoform 1 [Nomascus
           leucogenys]
 gi|441597292|ref|XP_004087374.1| PREDICTED: bromodomain-containing protein 7 isoform 2 [Nomascus
           leucogenys]
          Length = 508

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 23  PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 82

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 83  HSGMKILSQERIQSLKQSID 102


>gi|119624282|gb|EAX03877.1| bromodomain and PHD finger containing, 3, isoform CRA_a [Homo
           sapiens]
          Length = 453

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 47/75 (62%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           +Y E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  + +
Sbjct: 122 NYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRD 181

Query: 123 LAKKNFENLRQDSDD 137
           L      + R+ +++
Sbjct: 182 LGGAILRHARRQAEN 196


>gi|119603163|gb|EAW82757.1| bromodomain containing 7, isoform CRA_b [Homo sapiens]
 gi|119603164|gb|EAW82758.1| bromodomain containing 7, isoform CRA_b [Homo sapiens]
          Length = 508

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 23  PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 82

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 83  HSGMKILSQERIQSLKQSID 102


>gi|57524848|ref|NP_001005839.1| bromodomain-containing protein 7 [Gallus gallus]
 gi|82082122|sp|Q5ZKG2.1|BRD7_CHICK RecName: Full=Bromodomain-containing protein 7
 gi|53130979|emb|CAG31781.1| hypothetical protein RCJMB04_11a18 [Gallus gallus]
          Length = 651

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 51/77 (66%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I++PMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN PDTIY++ A+ + 
Sbjct: 166 PGYSMIIKNPMDFSTMKEKIKNNGYQSIEELKDNFKLMCTNAMTYNKPDTIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQ 133
                 L+++  ++L+Q
Sbjct: 226 HSGMKILSQERIQSLKQ 242


>gi|385199225|gb|AFI44991.1| bromodomain and PHD finger-containing protein, partial [Bazarella
           subneglecta]
          Length = 508

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 1/80 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYAT-LEQFEKDVFLICSNAMQYNAPDTIYF 114
           +D  E+PDY EV++HPMD  T+RNKL +G Y   L+  E D  L+  N + YN  +T+Y+
Sbjct: 321 VDLNEVPDYSEVVKHPMDLSTMRNKLESGKYLNYLDDLEADFDLMIRNCLAYNNRETMYY 380

Query: 115 RQARSIHELAKKNFENLRQD 134
           R    + +     F+N+R+D
Sbjct: 381 RAGVRMRDQCASLFKNVRED 400


>gi|385199177|gb|AFI44967.1| bromodomain and PHD finger-containing protein, partial [Sycorax
           silacea]
          Length = 643

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 47/75 (62%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY EV++ PMD  T+R+KL +G Y++L+  E D  L+  N + YN  DT+Y+R    
Sbjct: 316 EVPDYTEVVKLPMDLSTIRSKLDSGLYSSLDYLEADFDLMIRNCLAYNNKDTMYYRAGIR 375

Query: 120 IHELAKKNFENLRQD 134
           + +     F++ RQD
Sbjct: 376 MRDQCASLFKSARQD 390


>gi|385199165|gb|AFI44961.1| bromodomain and PHD finger-containing protein, partial [Brunettia
           sp. nov. Thailand]
          Length = 705

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 48/81 (59%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HP+D  T+R+KL +G Y  L+  E D  L+  N + YN  DT+Y+R
Sbjct: 315 VDVNEVPDYADIVKHPIDLSTMRHKLISGMYTALDDLEADFDLMIRNCLAYNNRDTMYYR 374

Query: 116 QARSIHELAKKNFENLRQDSD 136
               + +     F+ +R + D
Sbjct: 375 AGVRMRDQCTSVFKTVRDELD 395


>gi|326927259|ref|XP_003209810.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein
           7-like [Meleagris gallopavo]
          Length = 750

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 51/77 (66%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I++PMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN PDTIY++ A+ + 
Sbjct: 259 PGYSMIIKNPMDFSTMKEKIKNNGYQSIEELKDNFKLMCTNAMTYNKPDTIYYKAAKKLL 318

Query: 122 E-----LAKKNFENLRQ 133
                 L+++  ++L+Q
Sbjct: 319 HSGMKILSQERIQSLKQ 335


>gi|66267520|gb|AAH94706.1| Bromodomain containing 7 [Homo sapiens]
          Length = 651

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSIIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245


>gi|444720757|gb|ELW61532.1| Bromodomain-containing protein 7 [Tupaia chinensis]
          Length = 590

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 122 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 181

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 182 HSGMKILSQERIQSLKQSID 201


>gi|251823738|ref|NP_001156554.1| bromodomain and PHD finger containing, 1 [Oryzias latipes]
 gi|237823392|dbj|BAH59433.1| bromodomain and PHD finger containing, 1 [Oryzias latipes]
          Length = 1283

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           EE+PDY E I+ PMDF T+ N L +  Y T E FE D  LI +N ++YNA DT+++R A 
Sbjct: 727 EEVPDYLEHIDTPMDFQTMWNLLESHRYLTFEAFEGDFGLIVNNCLKYNAKDTVFYRAAL 786

Query: 119 SIHELAKKNFENLRQDSD 136
            + E+        ++ +D
Sbjct: 787 RLREMGGAVIRAAKRQAD 804


>gi|432091613|gb|ELK24635.1| Bromodomain-containing protein 1 [Myotis davidii]
          Length = 1253

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY E I+ PMDF T+R +L    Y++L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLEHIKQPMDFSTMRKRLEAQGYSSLPEFEEDFDLIVDNCMRYNAKDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+  D
Sbjct: 654 RLRDQGGVVLRQARRQVD 671


>gi|410983513|ref|XP_003998083.1| PREDICTED: bromodomain-containing protein 7 [Felis catus]
          Length = 661

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 51/77 (66%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 176 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 235

Query: 122 E-----LAKKNFENLRQ 133
                 L+++  ++L+Q
Sbjct: 236 HSGMKILSQERIQSLKQ 252


>gi|385199171|gb|AFI44964.1| bromodomain and PHD finger-containing protein, partial [Psychoda
           phalaenoides]
          Length = 759

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 46/76 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           EE+ DY +++++PMD GT+R KL  G Y  L+ FE D  L+  N + YN  DT+Y+R   
Sbjct: 331 EEVLDYADIVKYPMDLGTMRTKLETGMYGLLDDFEADFDLMIRNCLAYNDRDTMYYRAGV 390

Query: 119 SIHELAKKNFENLRQD 134
            + +     F+ +RQ+
Sbjct: 391 RMRDQCAPCFKQVRQE 406


>gi|385199207|gb|AFI44982.1| bromodomain and PHD finger-containing protein, partial [Lutzomyia
           verrucarum]
          Length = 593

 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 50/83 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HPMD  T+  KL  GAY +L+  E D  L+  N + YN  DTI++R
Sbjct: 328 VDVNEVPDYMDIVKHPMDLSTMAMKLKGGAYESLDDLEADFDLMIRNCLAYNNKDTIFYR 387

Query: 116 QARSIHELAKKNFENLRQDSDDN 138
               + +     F+++R+D + +
Sbjct: 388 AGARMRDQGGALFKSVRRDLEKD 410


>gi|413925460|gb|AFW65392.1| hypothetical protein ZEAMMB73_923875 [Zea mays]
          Length = 613

 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 2/80 (2%)

Query: 56  MDPE--ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
           +DP+  ++PDY +VI +PMD GTV+NKL    Y ++E+F  DV L  SNAM+YN P    
Sbjct: 86  VDPDLYKIPDYFDVIRNPMDLGTVKNKLTKKKYVSIEEFAADVRLTFSNAMKYNPPGNDV 145

Query: 114 FRQARSIHELAKKNFENLRQ 133
              AR ++E+    +E++ +
Sbjct: 146 HAFARELNEIFDSEWESVER 165


>gi|431916823|gb|ELK16583.1| Bromodomain and PHD finger-containing protein 3 [Pteropus alecto]
          Length = 1082

 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 47/75 (62%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           +Y E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  + +
Sbjct: 502 NYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRD 561

Query: 123 LAKKNFENLRQDSDD 137
           L      + R+ +++
Sbjct: 562 LGGAILRHARRQAEN 576


>gi|344289267|ref|XP_003416366.1| PREDICTED: bromodomain-containing protein 7 [Loxodonta africana]
          Length = 651

 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 51/77 (66%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQ 133
                 L+++  ++L+Q
Sbjct: 226 HSGMKILSQERIQSLKQ 242


>gi|119624285|gb|EAX03880.1| bromodomain and PHD finger containing, 3, isoform CRA_d [Homo
           sapiens]
 gi|119624287|gb|EAX03882.1| bromodomain and PHD finger containing, 3, isoform CRA_d [Homo
           sapiens]
          Length = 1204

 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 47/75 (62%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           +Y E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  + +
Sbjct: 624 NYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRD 683

Query: 123 LAKKNFENLRQDSDD 137
           L      + R+ +++
Sbjct: 684 LGGAILRHARRQAEN 698


>gi|443898988|dbj|GAC76321.1| PHD finger protein BR140/LIN-49 [Pseudozyma antarctica T-34]
          Length = 1202

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 45/72 (62%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           ++PDY E+++ PMD+  ++ K+AN  Y ++E+   DV  I +NAM YN PDT Y + A  
Sbjct: 573 DVPDYYEIVKEPMDWAAIKQKIANKEYESVEEMRTDVLKITTNAMTYNKPDTPYHKAASK 632

Query: 120 IHELAKKNFENL 131
           I ++    F+ L
Sbjct: 633 ILKMIPDVFDEL 644


>gi|385199179|gb|AFI44968.1| bromodomain and PHD finger-containing protein, partial [Lutzomyia
           longipalpis]
          Length = 732

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 48/79 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HPMD  T+  KL +GAY +L+  E D  L+  N + YN  DTI++R
Sbjct: 351 VDVNEVPDYMDIVKHPMDLSTMAMKLKSGAYESLDDMEADFDLMIRNCLAYNNKDTIFYR 410

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+ +R+D
Sbjct: 411 AGTRMRDQGGALFKGVRRD 429


>gi|281338425|gb|EFB14009.1| hypothetical protein PANDA_002219 [Ailuropoda melanoleuca]
          Length = 1206

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 47/75 (62%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           +Y E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  + +
Sbjct: 625 NYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRD 684

Query: 123 LAKKNFENLRQDSDD 137
           L      + R+ +++
Sbjct: 685 LGGAILRHARRQAEN 699


>gi|301756841|ref|XP_002914274.1| PREDICTED: bromodomain-containing protein 7-like [Ailuropoda
           melanoleuca]
          Length = 681

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 51/77 (66%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 196 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 255

Query: 122 E-----LAKKNFENLRQ 133
                 L+++  ++L+Q
Sbjct: 256 HSGMKILSQERIQSLKQ 272


>gi|358337310|dbj|GAA34342.2| bromodomain and PHD finger-containing protein 1 [Clonorchis
           sinensis]
          Length = 1388

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 46/73 (63%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           + PE  PDY  +I+HPMDF T+R+K+    Y ++++FE D  L+ +N  QYN  ++IY+ 
Sbjct: 686 VGPELAPDYHLIIKHPMDFATMRSKIEQSCYLSIKEFESDYNLMLNNCFQYNRRESIYYA 745

Query: 116 QARSIHELAKKNF 128
            A  I E  K+ F
Sbjct: 746 AATRISEQGKQIF 758


>gi|242041047|ref|XP_002467918.1| hypothetical protein SORBIDRAFT_01g036350 [Sorghum bicolor]
 gi|241921772|gb|EER94916.1| hypothetical protein SORBIDRAFT_01g036350 [Sorghum bicolor]
          Length = 557

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 53/88 (60%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           ++ DY E++  P DF T+R K  +G Y  LEQFE DV+++   A+  N+ DT+ FR+A +
Sbjct: 118 QVTDYAELVSRPGDFATLRQKNKDGMYTALEQFENDVYMVFQKAITMNSQDTVPFREAMA 177

Query: 120 IHELAKKNFENLRQDSDDNEPETKVVRR 147
           + + AK  F +L+ +   +E E    R+
Sbjct: 178 LLDQAKLVFMSLKSNQMFSESELAAWRQ 205


>gi|385199195|gb|AFI44976.1| bromodomain and PHD finger-containing protein, partial [Lutzomyia
           shannoni]
          Length = 629

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 47/79 (59%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HPMD  T+  KL  GAY +L+  E D  L+  N + YN  DTI++R
Sbjct: 324 VDVNEVPDYTDIVKHPMDLSTMATKLKAGAYESLDDMEADFDLMIRNCLAYNNKDTIFYR 383

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+ +R+D
Sbjct: 384 AGARMRDQGGSLFKAVRKD 402


>gi|148234988|ref|NP_001085846.1| bromodomain containing 1 [Xenopus laevis]
 gi|49118426|gb|AAH73421.1| MGC80898 protein [Xenopus laevis]
          Length = 1055

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 41/58 (70%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           E+PDY + I+HPMDF T++ +L +  Y  L +FE+D  LI  N M+YNA DTI++R A
Sbjct: 594 EVPDYLDHIKHPMDFSTMKKRLEDQRYRNLNEFEEDFNLIIENCMKYNAKDTIFYRAA 651


>gi|385199161|gb|AFI44959.1| bromodomain and PHD finger-containing protein, partial
           [Mystropsychoda pallida]
          Length = 802

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 48/79 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D +E+PDY E+++HPMD  T+R KL +G Y  L+  E D  L+  N + YN  +T+Y+R
Sbjct: 348 VDVDEVPDYTEIVKHPMDLSTMRQKLESGKYYNLDDLEADFDLMIRNCLAYNDRETMYYR 407

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+ +R++
Sbjct: 408 AGVRMRDQCAAIFKGVREE 426


>gi|341876822|gb|EGT32757.1| hypothetical protein CAEBREN_28885 [Caenorhabditis brenneri]
          Length = 637

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 44/75 (58%)

Query: 54  FKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
           F +  E  PDY E+I+ PMD  T+R K+ +G YATL   + D  LI +NA+QYN P T++
Sbjct: 176 FPVTQEMAPDYHEIIKDPMDLQTIREKIEDGKYATLPDMKADCALIVANAIQYNQPTTVF 235

Query: 114 FRQARSIHELAKKNF 128
              AR +  L    F
Sbjct: 236 HLAARRLMNLVNYYF 250


>gi|281338902|gb|EFB14486.1| hypothetical protein PANDA_002142 [Ailuropoda melanoleuca]
          Length = 635

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 51/77 (66%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 150 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 209

Query: 122 E-----LAKKNFENLRQ 133
                 L+++  ++L+Q
Sbjct: 210 HSGMKILSQERIQSLKQ 226


>gi|385199157|gb|AFI44957.1| bromodomain and PHD finger-containing protein, partial [Clytocerus
           americana]
          Length = 737

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 46/79 (58%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY E+++HPMD  T+R+KL  G Y  L+  E D  L+  N + YN  DT+Y+R
Sbjct: 341 VDITEVPDYSEIVKHPMDLSTMRHKLEAGKYYNLDDMEADFDLMIRNCLAYNNRDTMYYR 400

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+ +R D
Sbjct: 401 AGVRMRDQCASLFKAVRDD 419


>gi|355673432|gb|AER95170.1| bromodomain containing 7 [Mustela putorius furo]
          Length = 636

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 51/77 (66%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 151 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 210

Query: 122 E-----LAKKNFENLRQ 133
                 L+++  ++L+Q
Sbjct: 211 HSGMKILSQERIQSLKQ 227


>gi|385199209|gb|AFI44983.1| bromodomain and PHD finger-containing protein, partial
           [Metalimnobia sp. GRC-2012]
          Length = 644

 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 48/79 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY +++ HPMD  T+R KL +G Y T++Q ++D  L+  N + YN  DTI++R
Sbjct: 334 VDTNEVPDYTDIVTHPMDLSTMRLKLNSGVYFTIDQMDEDFKLMIRNCLAYNNRDTIFYR 393

Query: 116 QARSIHELAKKNFENLRQD 134
               + ++    F+  R +
Sbjct: 394 AGVKMRDIGDSLFKGARTE 412


>gi|343427398|emb|CBQ70925.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
          Length = 1230

 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 65/116 (56%), Gaps = 1/116 (0%)

Query: 23  IQQITTKGLSWNWDPQRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLA 82
           I+++ +KGL +   P+ +  ++           ++P+E+P Y +VI+ PMDFGT++ K+ 
Sbjct: 193 IKRLRSKGL-YEALPKLIENLQRRDSYKFFCEPVNPDEVPGYSDVIKTPMDFGTMQRKVD 251

Query: 83  NGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDN 138
           +  Y+ ++ F+ D  L+ SNAM +N   T+Y+ +A+ I     +  E      +DN
Sbjct: 252 DRLYSHMDDFKADFQLVVSNAMTFNPEGTLYYNEAKRITAWGNRAIEREGMAVNDN 307


>gi|348583938|ref|XP_003477729.1| PREDICTED: bromodomain-containing protein 7-like [Cavia porcellus]
          Length = 664

 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 51/77 (66%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 179 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 238

Query: 122 E-----LAKKNFENLRQ 133
                 L+++  ++L+Q
Sbjct: 239 HSGMKILSQERIQSLKQ 255


>gi|340714403|ref|XP_003395718.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein
           7-like [Bombus terrestris]
          Length = 801

 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y ++I +PMDF T++ K+ + +Y  L +F  D  L+C NA  YN PDTIY++ A+ + 
Sbjct: 207 PGYSQIITNPMDFSTIKQKIDDNSYQNLNEFVDDFKLMCDNATTYNHPDTIYYKAAKKLL 266

Query: 122 ELAKKNF--ENLRQ 133
            +  K    E LRQ
Sbjct: 267 HVGLKMVTPEKLRQ 280


>gi|47213506|emb|CAF96088.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1198

 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 48/79 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY + I+ PMDF T+R ++   +Y+ L+QFEKD  LI  N M+YN+ DT ++R
Sbjct: 605 VDVSEVPDYLDHIKDPMDFSTMRQRIDAQSYSNLDQFEKDFNLIIDNCMKYNSKDTYFYR 664

Query: 116 QARSIHELAKKNFENLRQD 134
            A  + +         R+D
Sbjct: 665 AAVRLRDQGGALLRKARRD 683


>gi|350417394|ref|XP_003491401.1| PREDICTED: bromodomain-containing protein 7-like [Bombus impatiens]
          Length = 801

 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y ++I +PMDF T++ K+ + +Y  L +F  D  L+C NA  YN PDTIY++ A+ + 
Sbjct: 207 PGYSQIITNPMDFSTIKQKIDDNSYQNLNEFVDDFKLMCDNATTYNHPDTIYYKAAKKLL 266

Query: 122 ELAKKNF--ENLRQ 133
            +  K    E LRQ
Sbjct: 267 HVGLKMVTPEKLRQ 280


>gi|402080101|gb|EJT75246.1| chromatin structure-remodeling complex protein rsc1 [Gaeumannomyces
           graminis var. tritici R3-111a-1]
          Length = 1039

 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 20/128 (15%)

Query: 40  LYQIKSYCCSSSIDFKMDPEE----------------LPDYCEVIEHPMDFGTVRNKLAN 83
           + +  +Y C    +FK DPE+                 PDY EVI+ P+ F T+R K+  
Sbjct: 164 ISETSAYLC----EFKEDPEDEVTLAANFQRLLNRRSYPDYFEVIKEPVAFSTIRQKILK 219

Query: 84  GAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETK 143
             Y    +F +DV LIC NA  YN P  + F +A  + E+  K  E L Q+      E K
Sbjct: 220 KGYNNFGEFVRDVALICHNAQVYNRPSALVFGEAVRLREIFVKELERLVQEKQITPDEAK 279

Query: 144 VVRRGRPP 151
           +   G  P
Sbjct: 280 LPYLGEIP 287


>gi|345793931|ref|XP_535306.3| PREDICTED: bromodomain-containing protein 7 [Canis lupus
           familiaris]
          Length = 661

 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 51/77 (66%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 176 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 235

Query: 122 E-----LAKKNFENLRQ 133
                 L+++  ++L+Q
Sbjct: 236 HSGMKILSQERIQSLKQ 252


>gi|320162934|gb|EFW39833.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 699

 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           E+ PDY +VI  PMDF T+R  +  GAY +L  FE+ + L+ +N M YN P+  Y RQA+
Sbjct: 136 EDAPDYADVIGEPMDFRTMRGNIEAGAYPSLAAFERHLKLVFTNCMHYNGPENHYHRQAK 195

Query: 119 -----SIHELAKKNFENLRQDSDD-NEPETKVVRRGRPPTKN 154
                S+  L  K      +D      P T V    R  + N
Sbjct: 196 KLLQMSVDRLVPKTLTAFERDRQKLRAPPTPVAASSRGASDN 237


>gi|195474339|ref|XP_002089449.1| GE24125 [Drosophila yakuba]
 gi|194175550|gb|EDW89161.1| GE24125 [Drosophila yakuba]
          Length = 1420

 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 47/79 (59%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++ PMD GT+R KL    Y +LEQ E D  L+  N + YN  DT+++R
Sbjct: 640 VDTSEVPDYTDIVKQPMDLGTMRAKLKECQYTSLEQLEADFDLMIQNCLAYNNKDTVFYR 699

Query: 116 QARSIHELAKKNFENLRQD 134
               + + A   F  +R++
Sbjct: 700 AGIRMRDQAAPLFVQVRKE 718


>gi|383863671|ref|XP_003707303.1| PREDICTED: bromodomain-containing protein 7-like [Megachile
           rotundata]
          Length = 801

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y ++I +PMDF T++ K+ +  Y  L +F  D  L+C NA  YN PDTIYF+ A+ + 
Sbjct: 207 PGYSQIITNPMDFSTIKQKIDDNNYQNLNEFIDDFKLMCDNATTYNHPDTIYFKAAKKLL 266

Query: 122 ELAKKNF--ENLRQ 133
            +  K    E LRQ
Sbjct: 267 HVGLKMVTPEKLRQ 280


>gi|195332071|ref|XP_002032722.1| GM20806 [Drosophila sechellia]
 gi|194124692|gb|EDW46735.1| GM20806 [Drosophila sechellia]
          Length = 1430

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 47/79 (59%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++ PMD GT+R KL    Y +LEQ E D  L+  N + YN  DT+++R
Sbjct: 640 VDTSEVPDYTDIVKQPMDLGTMRAKLKECQYTSLEQLEADFDLMIQNCLAYNNKDTVFYR 699

Query: 116 QARSIHELAKKNFENLRQD 134
               + + A   F  +R++
Sbjct: 700 AGIRMRDQAAPLFVQVRKE 718


>gi|194863858|ref|XP_001970649.1| GG10760 [Drosophila erecta]
 gi|190662516|gb|EDV59708.1| GG10760 [Drosophila erecta]
          Length = 1428

 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 47/79 (59%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++ PMD GT+R KL    Y +LEQ E D  L+  N + YN  DT+++R
Sbjct: 640 VDTSEVPDYTDIVKQPMDLGTMRAKLKECQYTSLEQLEADFDLMIQNCLAYNNKDTVFYR 699

Query: 116 QARSIHELAKKNFENLRQD 134
               + + A   F  +R++
Sbjct: 700 AGIRMRDQAAPLFVQVRKE 718


>gi|351712690|gb|EHB15609.1| Bromodomain-containing protein 7 [Heterocephalus glaber]
          Length = 676

 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 51/77 (66%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 227 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 286

Query: 122 E-----LAKKNFENLRQ 133
                 L+++  ++L+Q
Sbjct: 287 HSGMKILSQERIQSLKQ 303


>gi|348523333|ref|XP_003449178.1| PREDICTED: bromodomain and PHD finger-containing protein 3
           [Oreochromis niloticus]
          Length = 1232

 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 45/69 (65%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D +E+PDY E I HPMDF T+R+KL + +Y ++   E D  L+ SN + YNA DT++ R
Sbjct: 624 VDIKEVPDYLEFISHPMDFSTMRSKLESHSYRSVADLEADFNLMVSNCLLYNAKDTVFHR 683

Query: 116 QARSIHELA 124
            A  + +L 
Sbjct: 684 AALRLRDLG 692


>gi|260819232|ref|XP_002604941.1| hypothetical protein BRAFLDRAFT_217101 [Branchiostoma floridae]
 gi|229290270|gb|EEN60951.1| hypothetical protein BRAFLDRAFT_217101 [Branchiostoma floridae]
          Length = 113

 Score = 68.9 bits (167), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/72 (40%), Positives = 45/72 (62%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y ++I  PMDF T++ KL N  Y ++E+F  D  ++C NAM YN P+TIY++ A+ + 
Sbjct: 29  PGYSQIILRPMDFSTMKEKLDNDEYNSIEEFRNDFKVMCDNAMIYNHPETIYYKAAKKML 88

Query: 122 ELAKKNFENLRQ 133
            +  K    +RQ
Sbjct: 89  NIGVKMMSKVRQ 100


>gi|385199167|gb|AFI44962.1| bromodomain and PHD finger-containing protein, partial [Setomima
           nitida]
          Length = 747

 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 47/79 (59%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+ DY ++++HPMD  T+RNKL +G Y TL+  E D  L+  N + YN  DT+Y+R
Sbjct: 349 VDITEVTDYMDIVKHPMDLSTMRNKLESGMYYTLDDLEADFDLMIRNCLAYNNRDTMYYR 408

Query: 116 QARSIHELAKKNFENLRQD 134
               + +      ++ RQD
Sbjct: 409 AGVRMRDQCAGLLKSTRQD 427


>gi|313233001|emb|CBY19548.1| unnamed protein product [Oikopleura dioica]
          Length = 1346

 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 49/79 (62%)

Query: 55  KMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF 114
           K DPE  PDY ++I+ PMD  ++  K++N  YA+LE+   D+ L+C NA QYN P++  F
Sbjct: 385 KPDPEIYPDYYQIIKEPMDMVSIDRKISNNQYASLEELMHDISLMCKNAKQYNEPNSQVF 444

Query: 115 RQARSIHELAKKNFENLRQ 133
             A  + ++A+   + + Q
Sbjct: 445 IDANILEQVAQNKVKEICQ 463



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           ++ PDY E I  P+    +R K+  G Y  LEQ E D+ L+C+NA ++N   +  F  A 
Sbjct: 238 KQYPDYYEDITQPIALDKIRQKVIKGRYKNLEQMEDDIVLMCNNAREFNVEGSQIFMDAT 297

Query: 119 SIHELAK 125
            +  +A+
Sbjct: 298 LMMRVAR 304



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 4/69 (5%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLAN----GAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ELPDY  V++ PMD   V  ++        Y  +E+F +++ L+  NA  YN P +  ++
Sbjct: 524 ELPDYYRVVKRPMDLDKVMARVKKIPEENGYKNIEEFMEELLLVFENATIYNEPGSTIYQ 583

Query: 116 QARSIHELA 124
            A  +H++A
Sbjct: 584 DALILHKVA 592



 Score = 45.8 bits (107), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 30/45 (66%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQY 106
           P+Y ++IE+P+D  T++ K+ N  Y   + F+KDV L+  N+ +Y
Sbjct: 59  PEYFKIIENPIDLSTIQKKIRNDEYGDFDLFQKDVELLVDNSKKY 103


>gi|74223850|dbj|BAE23823.1| unnamed protein product [Mus musculus]
          Length = 150

 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 23  PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 82

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 83  HSGMKILSQERIQSLKQSID 102


>gi|348515183|ref|XP_003445119.1| PREDICTED: bromodomain-containing protein 1-like [Oreochromis
           niloticus]
          Length = 1243

 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY + I+HPMDF T+R ++    Y   +QFE D  LI  N M+YN+ DT ++R
Sbjct: 597 VDVTEVPDYLDHIKHPMDFSTMRKRIDAQGYNNFDQFEDDFNLIIENCMKYNSKDTYFYR 656

Query: 116 QARSIHELAKKNFENLRQDSD 136
            A  + +         R+D++
Sbjct: 657 AAVRLRDQGGSLLRKARRDAE 677


>gi|357631683|gb|EHJ79152.1| hypothetical protein KGM_15598 [Danaus plexippus]
          Length = 1160

 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 44/79 (55%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DP E+PDY  V++HPMD  T+  KL  G Y T++  E D  L+  N + YN  DT++++
Sbjct: 616 VDPLEVPDYSTVVKHPMDLSTMGKKLDRGIYKTIDDVEADFQLMIDNCLTYNKKDTVFYK 675

Query: 116 QARSIHELAKKNFENLRQD 134
               + E     F   R+D
Sbjct: 676 AGVKMREQCTSIFRQARRD 694


>gi|221059723|ref|XP_002260507.1| bromodomain containing protein [Plasmodium knowlesi strain H]
 gi|193810580|emb|CAQ41774.1| bromodomain containing protein, putative [Plasmodium knowlesi
           strain H]
          Length = 754

 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 40/66 (60%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY  +I+ PMDF T++ K+ N  Y   ++FEKD FLI +N   YN   TIY R A ++
Sbjct: 46  VPDYLNIIKEPMDFTTMKQKIQNYKYRDFQEFEKDAFLIINNCYTYNDKSTIYHRMAENL 105

Query: 121 HELAKK 126
               KK
Sbjct: 106 ETYYKK 111


>gi|417403854|gb|JAA48710.1| Putative irf-2-binding protein celtix-1 [Desmodus rotundus]
          Length = 678

 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 50/77 (64%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ +    L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDHFKLMCTNAMVYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQ 133
                 L+++  ++L+Q
Sbjct: 226 HSGMKILSQERIQSLKQ 242


>gi|449472870|ref|XP_002197404.2| PREDICTED: bromodomain-containing protein 7 [Taeniopygia guttata]
          Length = 653

 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 51/77 (66%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I++PMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN PDTIY++ A+ + 
Sbjct: 166 PGYSMIIKNPMDFSTMKEKIKNNGYQSIEELKDNFKLMCNNAMIYNKPDTIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQ 133
                 L+++  ++L+Q
Sbjct: 226 HSGMKILSQERIQSLKQ 242


>gi|417403657|gb|JAA48627.1| Putative irf-2-binding protein celtix-1 [Desmodus rotundus]
          Length = 654

 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 50/77 (64%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ +    L+C+NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDHFKLMCTNAMVYNKPETIYYKAAKKLL 225

Query: 122 E-----LAKKNFENLRQ 133
                 L+++  ++L+Q
Sbjct: 226 HSGMKILSQERIQSLKQ 242


>gi|431914113|gb|ELK15372.1| Bromodomain-containing protein 7 [Pteropus alecto]
          Length = 719

 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY + A+ + 
Sbjct: 222 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYHKAAKKLL 281

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 282 HSGMKILSQERIQSLKQSID 301


>gi|348533906|ref|XP_003454445.1| PREDICTED: bromodomain-containing protein 9-like [Oreochromis
           niloticus]
          Length = 651

 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 41/59 (69%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDF T+++K  N  Y T+ +F+ D  L+C NAM YN P+T+Y++ A+ +
Sbjct: 214 PGYSMIIKHPMDFSTMKDKNRNNEYKTVTEFKADFKLMCDNAMVYNRPETVYYKAAKKL 272


>gi|119624286|gb|EAX03881.1| bromodomain and PHD finger containing, 3, isoform CRA_e [Homo
           sapiens]
          Length = 878

 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 47/75 (62%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           +Y E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA DTI+ R A  + +
Sbjct: 547 NYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRD 606

Query: 123 LAKKNFENLRQDSDD 137
           L      + R+ +++
Sbjct: 607 LGGAILRHARRQAEN 621


>gi|449668927|ref|XP_004206899.1| PREDICTED: LOW QUALITY PROTEIN: peregrin-like [Hydra
           magnipapillata]
          Length = 1259

 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 24/118 (20%)

Query: 2   QSVVDLAV--LTVKRERRLFLVRIQQITTKGLSWNWDPQRLYQIKSYCCSSSIDFKMDPE 59
           Q VVDL +  L ++ ER L ++R + I                      S+     +DPE
Sbjct: 611 QQVVDLQLKPLQIEMERTLQMIREKDI----------------------SNVFSQPVDPE 648

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           + PDY E I++PMDF T++ KL++  Y + + FE D  LI  N M +N  DT Y+R A
Sbjct: 649 QAPDYHEFIKNPMDFSTMQQKLSDYEYMSFDDFEADFNLIIKNCMDFNNEDTKYYRSA 706


>gi|71023609|ref|XP_762034.1| hypothetical protein UM05887.1 [Ustilago maydis 521]
 gi|46101599|gb|EAK86832.1| hypothetical protein UM05887.1 [Ustilago maydis 521]
          Length = 1768

 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 51/83 (61%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++P+E+P Y +VI+ PMDFGT++ K+ +  Y+ ++Q + D  L+ SNAM +N   T+Y+ 
Sbjct: 779 VNPDEVPGYSDVIKSPMDFGTMQRKVQDRLYSHMDQVKADFQLVISNAMTFNPEGTLYYN 838

Query: 116 QARSIHELAKKNFENLRQDSDDN 138
           +A+ I     +  E      +DN
Sbjct: 839 EAKRIAAWGNRAIEREGMAVNDN 861


>gi|426225911|ref|XP_004007102.1| PREDICTED: bromodomain-containing protein 1 [Ovis aries]
          Length = 1026

 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T+R +L    Y TL + E+D  LI  N M+YNA DT+++R A 
Sbjct: 560 KEVPDYLDHIKRPMDFATMRKRLEAQGYRTLRELEEDFDLIVDNCMKYNAKDTVFYRAAV 619

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+ +D
Sbjct: 620 RLRDQGGVVLRQARRQAD 637


>gi|380025805|ref|XP_003696658.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein
           7-like [Apis florea]
          Length = 800

 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 2/74 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y ++I +PMDF T++ K+ + +Y  L +F +D  L+C NA  YN PDTIY++ A+ + 
Sbjct: 206 PGYSQIITNPMDFSTIKQKIDDNSYQNLNEFVEDFKLMCDNATTYNHPDTIYYKAAKKLL 265

Query: 122 ELAKKNF--ENLRQ 133
            +  K    + LRQ
Sbjct: 266 HVGLKMVTPDKLRQ 279


>gi|336467444|gb|EGO55608.1| hypothetical protein NEUTE1DRAFT_131320 [Neurospora tetrasperma
           FGSC 2508]
          Length = 1475

 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%)

Query: 44  KSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNA 103
           + Y  +S     ++   LPDY EVI+ PM F T+R KL   +Y +  +F +DV  IC NA
Sbjct: 380 EDYEIASGFQRLVNKRSLPDYFEVIKTPMAFSTIRGKLGKKSYTSFNEFVQDVTRICHNA 439

Query: 104 MQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRG 148
             YN P    F  A  + E+ K+    L Q  D  E + ++   G
Sbjct: 440 QVYNRPSAPIFSDAGRLLEVFKEKLAELVQKGDITEKDAEIPDYG 484


>gi|414866640|tpg|DAA45197.1| TPA: hypothetical protein ZEAMMB73_902332 [Zea mays]
          Length = 509

 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 54  FKM-DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTI 112
           F M D  ++ DY E++  P DF T+R K  +G Y  LEQFE DV+++   A+  N+ DT+
Sbjct: 133 FAMPDDIQVTDYAELVSRPGDFATLRQKNRDGMYTALEQFENDVYMVFQKAITMNSQDTV 192

Query: 113 YFRQARSIHELAKKNFENLRQDSDDNEPETKVVR 146
            FR+  ++ + AK  F +LR +   +E E    R
Sbjct: 193 PFREGMALLDQAKLVFMSLRSNQMFSESELAAWR 226


>gi|335892828|ref|NP_001229444.1| bromodomain-containing protein 7 isoform 1 [Apis mellifera]
          Length = 800

 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 2/74 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y ++I +PMDF T++ K+ + +Y  L +F +D  L+C NA  YN PDTIY++ A+ + 
Sbjct: 206 PGYSQIITNPMDFSTIKQKIDDNSYQNLNEFVEDFKLMCDNATTYNHPDTIYYKAAKKLL 265

Query: 122 ELAKKNF--ENLRQ 133
            +  K    + LRQ
Sbjct: 266 HVGLKMVTPDKLRQ 279


>gi|307176036|gb|EFN65795.1| Bromodomain-containing protein 7 [Camponotus floridanus]
          Length = 813

 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y ++I +PMDF T++ K+ +  Y  L++F  D  L+C NAM YN  DTIY++ A+ + 
Sbjct: 213 PGYSQIITNPMDFSTIKQKIDDNNYQNLQEFVDDFKLMCDNAMTYNHSDTIYYKAAKKLL 272

Query: 122 ELAKKNF--ENLRQ 133
            +  K    E LRQ
Sbjct: 273 HVGLKMVTPEKLRQ 286


>gi|47225490|emb|CAG11973.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 488

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 41/59 (69%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+HPMDF T+++K+ N  Y T+ +F+ D  L+C NA  YN P+T+Y++ A+ +
Sbjct: 39  PGYSTIIKHPMDFSTMKDKIINNEYNTVTEFKADFKLMCDNATVYNRPETVYYKAAKKL 97


>gi|334359499|pdb|3RCW|A Chain A, Crystal Structure Of The Bromodomain Of Human Brd1
 gi|334359500|pdb|3RCW|B Chain B, Crystal Structure Of The Bromodomain Of Human Brd1
 gi|334359501|pdb|3RCW|C Chain C, Crystal Structure Of The Bromodomain Of Human Brd1
 gi|334359502|pdb|3RCW|D Chain D, Crystal Structure Of The Bromodomain Of Human Brd1
 gi|334359503|pdb|3RCW|E Chain E, Crystal Structure Of The Bromodomain Of Human Brd1
 gi|334359504|pdb|3RCW|F Chain F, Crystal Structure Of The Bromodomain Of Human Brd1
 gi|334359505|pdb|3RCW|G Chain G, Crystal Structure Of The Bromodomain Of Human Brd1
 gi|334359506|pdb|3RCW|H Chain H, Crystal Structure Of The Bromodomain Of Human Brd1
          Length = 135

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+HPMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 41  KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 100

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 101 RLRDQGGVVLRQARREVD 118


>gi|440899047|gb|ELR50418.1| Bromodomain-containing protein 1 [Bos grunniens mutus]
          Length = 1182

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T+R +L    Y TL + E+D  LI  N M+YNA DT+++R A 
Sbjct: 593 KEVPDYLDHIKRPMDFATMRKRLEAQGYRTLRELEEDFDLIVDNCMKYNAKDTVFYRAAV 652

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+ +D
Sbjct: 653 RLRDQGGVVLRQARRQAD 670


>gi|20129741|ref|NP_610266.1| Br140 [Drosophila melanogaster]
 gi|7304241|gb|AAF59276.1| Br140 [Drosophila melanogaster]
 gi|21429920|gb|AAM50638.1| GH12223p [Drosophila melanogaster]
 gi|220945954|gb|ACL85520.1| CG1845-PA [synthetic construct]
          Length = 1430

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 47/79 (59%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++ PMD GT+R KL    Y +LEQ E D  L+  N + YN  DT+++R
Sbjct: 640 VDTSEVPDYTDIVKQPMDLGTMRAKLKECQYNSLEQLEADFDLMIQNCLAYNNKDTVFYR 699

Query: 116 QARSIHELAKKNFENLRQD 134
               + + A   F  +R++
Sbjct: 700 AGIRMRDQAAPLFVQVRKE 718


>gi|219118433|ref|XP_002179989.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408246|gb|EEC48180.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1603

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 8/118 (6%)

Query: 24  QQITTKGLSWNWDPQRLYQIKSYCCSSSIDFKMDPEEL--PDYCEVIEHPMDFGTVRNKL 81
           Q++ TKGL        L  ++S+  +   +  +DP EL  PDY EVI+ PMD GT+R KL
Sbjct: 572 QKLKTKGLD------ALKTLQSHQHAWVFNTPVDPVELGLPDYFEVIKKPMDLGTIRKKL 625

Query: 82  ANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNE 139
            NG Y  L+ F++ V L   NAM YN   ++ +  A  +    + +F  L +  +  E
Sbjct: 626 ENGVYQRLDDFKEHVLLTFDNAMMYNPEGSVVYNMANEMKVKFQSDFVKLMEQLNAEE 683


>gi|335892830|ref|NP_001229445.1| bromodomain-containing protein 7 isoform 2 [Apis mellifera]
          Length = 749

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 2/74 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y ++I +PMDF T++ K+ + +Y  L +F +D  L+C NA  YN PDTIY++ A+ + 
Sbjct: 155 PGYSQIITNPMDFSTIKQKIDDNSYQNLNEFVEDFKLMCDNATTYNHPDTIYYKAAKKLL 214

Query: 122 ELAKKNF--ENLRQ 133
            +  K    + LRQ
Sbjct: 215 HVGLKMVTPDKLRQ 228


>gi|410899921|ref|XP_003963445.1| PREDICTED: peregrin-like isoform 1 [Takifugu rubripes]
          Length = 1277

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 47/77 (61%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T+ N+L +  Y T E FE D  LI +N ++YNA DT+++R A  
Sbjct: 727 EVPDYLDHIDTPMDFQTMWNQLESHRYLTFEAFEADFGLIVNNCLKYNAKDTVFYRAALR 786

Query: 120 IHELAKKNFENLRQDSD 136
           + E+        R+ ++
Sbjct: 787 LREMGGSVIRTARRQAE 803


>gi|402884616|ref|XP_003905772.1| PREDICTED: bromodomain-containing protein 1 isoform 1 [Papio
           anubis]
          Length = 1189

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKQPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|355563779|gb|EHH20341.1| hypothetical protein EGK_03178 [Macaca mulatta]
          Length = 1189

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKQPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|156100593|ref|XP_001616024.1| bromodomain protein [Plasmodium vivax Sal-1]
 gi|148804898|gb|EDL46297.1| bromodomain protein, putative [Plasmodium vivax]
          Length = 763

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 40/66 (60%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY  +I+ PMDF T++ K+ N  Y   ++FEKD FLI +N   YN   TIY R A ++
Sbjct: 46  VPDYLNIIKEPMDFTTMKQKIQNYKYRDFQEFEKDFFLIINNCYTYNDKSTIYHRIAENV 105

Query: 121 HELAKK 126
               KK
Sbjct: 106 ENYYKK 111


>gi|443717120|gb|ELU08315.1| hypothetical protein CAPTEDRAFT_106550 [Capitella teleta]
          Length = 806

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 53  DFKMDP---EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
           DF  +P   +E+PDY E I+HPMD  T+  K+ +  Y   +QF  D  LI +N M+YNA 
Sbjct: 623 DFFSEPVSLDEVPDYVEYIKHPMDLSTMEKKMESHEYVNFDQFSNDFDLIVANCMKYNAK 682

Query: 110 DTIYFRQARSIHELAKKNFENLRQDSD 136
           DT+++R A    +       N R+ ++
Sbjct: 683 DTVFYRAALKYRDQGGAVIRNARRTAE 709


>gi|109094585|ref|XP_001111383.1| PREDICTED: bromodomain-containing protein 1-like isoform 3 [Macaca
           mulatta]
          Length = 1190

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKQPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|213515108|ref|NP_001135244.1| bromodomain-containing protein 7 [Salmo salar]
 gi|209155156|gb|ACI33810.1| Bromodomain-containing protein 7 [Salmo salar]
 gi|223648610|gb|ACN11063.1| Bromodomain-containing protein 7 [Salmo salar]
          Length = 633

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+ PMDFG ++ K+ N  Y +LE+ + D  ++C NAM YN P+TIY + AR + 
Sbjct: 152 PGYSTIIKRPMDFGAMKEKVKNEYYQSLEELKVDFRIMCENAMIYNKPETIYHKAARKLL 211

Query: 122 E-----LAKKNFENLRQ 133
                 L  +  E+LRQ
Sbjct: 212 HSGMKILRPERLESLRQ 228


>gi|355785091|gb|EHH65942.1| hypothetical protein EGM_02819 [Macaca fascicularis]
          Length = 1189

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKQPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|390597120|gb|EIN06520.1| hypothetical protein PUNSTDRAFT_46008 [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 760

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 43/65 (66%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D   +P Y ++I+HPMD GT+ +K++ G Y TLE+F+ D  L+ +NA  +N P TIY  
Sbjct: 94  VDVAAVPGYADLIKHPMDLGTISHKVSRGKYRTLEEFKADFQLVTTNAKTFNPPGTIYHS 153

Query: 116 QARSI 120
           +A  I
Sbjct: 154 EAERI 158


>gi|195551231|ref|XP_002076191.1| GD15310 [Drosophila simulans]
 gi|194201840|gb|EDX15416.1| GD15310 [Drosophila simulans]
          Length = 913

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 47/79 (59%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++ PMD GT+R KL    Y +LEQ E D  L+  N + YN  DT+++R
Sbjct: 640 VDTSEVPDYTDIVKQPMDLGTMRAKLKECQYTSLEQLEADFDLMIQNCLAYNNKDTVFYR 699

Query: 116 QARSIHELAKKNFENLRQD 134
               + + A   F  +R++
Sbjct: 700 AGIRMRDQAAPLFVQVRKE 718


>gi|195120249|ref|XP_002004641.1| GI20042 [Drosophila mojavensis]
 gi|193909709|gb|EDW08576.1| GI20042 [Drosophila mojavensis]
          Length = 1442

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 45/75 (60%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY ++++ PMD GT+R KL +  Y  LEQ E D  L+  N + YN  DT+++R    
Sbjct: 632 EVPDYMDIVKQPMDLGTMRAKLKDCRYTKLEQLEADFDLMIQNCLAYNNKDTVFYRAGIR 691

Query: 120 IHELAKKNFENLRQD 134
           + + A   F  LR++
Sbjct: 692 MRDQAAPLFVQLRKE 706


>gi|58270930|ref|XP_572621.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57228880|gb|AAW45314.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 634

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 45/71 (63%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           PDY  VI+ PMD  T++ K+ +G    +++ E+DV L+ SNAM YNAPD+  +  A+ + 
Sbjct: 554 PDYYSVIKRPMDLKTIKGKIKDGRIERIDELERDVLLMFSNAMMYNAPDSQVYEMAKEMM 613

Query: 122 ELAKKNFENLR 132
           +  + +F + R
Sbjct: 614 KDCEGHFAHFR 624


>gi|359066221|ref|XP_003586217.1| PREDICTED: bromodomain-containing protein 1-like [Bos taurus]
          Length = 1057

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T+R +L    Y TL + E+D  LI  N M+YNA DT+++R A 
Sbjct: 593 KEVPDYLDHIKRPMDFATMRKRLEAQGYRTLRELEEDFDLIVDNCMKYNAKDTVFYRAAV 652

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+ +D
Sbjct: 653 RLRDQGGVVLRQARRQAD 670


>gi|392588689|gb|EIW78021.1| hypothetical protein CONPUDRAFT_62190 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 548

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +++P Y +VI+ PMDFGTV  K++ G Y +LE+F  D  L+ SNA  +N P TIY  +A 
Sbjct: 105 DQIPGYADVIKRPMDFGTVSTKVSRGKYRSLEEFTDDFRLVTSNAKTFNPPGTIYHAEAD 164

Query: 119 SIH 121
            I 
Sbjct: 165 RIE 167


>gi|134115158|ref|XP_773877.1| hypothetical protein CNBH3290 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256505|gb|EAL19230.1| hypothetical protein CNBH3290 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 676

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 45/71 (63%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           PDY  VI+ PMD  T++ K+ +G    +++ E+DV L+ SNAM YNAPD+  +  A+ + 
Sbjct: 596 PDYYSVIKRPMDLKTIKGKIKDGRIERIDELERDVLLMFSNAMMYNAPDSQVYEMAKEMM 655

Query: 122 ELAKKNFENLR 132
           +  + +F + R
Sbjct: 656 KDCEGHFAHFR 666


>gi|358421890|ref|XP_003585177.1| PREDICTED: bromodomain-containing protein 1-like [Bos taurus]
          Length = 1057

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T+R +L    Y TL + E+D  LI  N M+YNA DT+++R A 
Sbjct: 593 KEVPDYLDHIKRPMDFATMRKRLEAQGYRTLRELEEDFDLIVDNCMKYNAKDTVFYRAAV 652

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+ +D
Sbjct: 653 RLRDQGGVVLRQARRQAD 670


>gi|410899923|ref|XP_003963446.1| PREDICTED: peregrin-like isoform 2 [Takifugu rubripes]
          Length = 1282

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 47/77 (61%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T+ N+L +  Y T E FE D  LI +N ++YNA DT+++R A  
Sbjct: 728 EVPDYLDHIDTPMDFQTMWNQLESHRYLTFEAFEADFGLIVNNCLKYNAKDTVFYRAALR 787

Query: 120 IHELAKKNFENLRQDSD 136
           + E+        R+ ++
Sbjct: 788 LREMGGSVIRTARRQAE 804


>gi|341882896|gb|EGT38831.1| CBN-TAG-298 protein [Caenorhabditis brenneri]
          Length = 637

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 41/67 (61%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           PDY E+I+ PMD  T+R K+ +G YATL   + D  LI +NA+QYN P T++   AR + 
Sbjct: 184 PDYHEIIKDPMDLQTIREKIEDGKYATLPDMKADCALIVANAIQYNQPTTVFHLAARRLM 243

Query: 122 ELAKKNF 128
            L    F
Sbjct: 244 NLVNYYF 250


>gi|162135989|ref|NP_001085290.1| uncharacterized protein LOC443648 [Xenopus laevis]
 gi|115313740|gb|AAI23909.1| LOC443648 protein [Xenopus laevis]
 gi|159507463|gb|ABW97744.1| bromodomain 4 [Xenopus laevis]
          Length = 1351

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYCE+I+HPMD GT++ K+ N  Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 407 DYCEIIKHPMDLGTIKVKMENRDYKEAQEFASDVRLMFSNCYKYNPPDHEVVIMARKLQD 466

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKP 158
           + +  F  +  + ++       +  G PP  + K P
Sbjct: 467 VFEMRFAKMPDEPEEAPAPVPSLAPG-PPAPSIKGP 501



 Score = 46.6 bits (109), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYHKIIKTPMDMGTIKKRLENHYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    + Q+    E E  VV+   RGR
Sbjct: 154 EKLFLQKISEMPQE----ETELTVVQSKGRGR 181


>gi|47223204|emb|CAG11339.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1293

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 47/77 (61%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T+ N+L +  Y T E FE D  LI +N ++YNA DT+++R A  
Sbjct: 750 EVPDYLDHIDTPMDFQTMWNQLESHRYLTFEAFEADFGLIVNNCLKYNAKDTVFYRAALR 809

Query: 120 IHELAKKNFENLRQDSD 136
           + E+        R+ ++
Sbjct: 810 LREMGGSVIRTARRQAE 826


>gi|383417189|gb|AFH31808.1| bromodomain-containing protein 1 [Macaca mulatta]
          Length = 1058

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKQPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|126336169|ref|XP_001365282.1| PREDICTED: peregrin isoform 2 [Monodelphis domestica]
          Length = 1213

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 44/77 (57%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 663 EVPDYLEHIKKPMDFSTMKQNLEAYRYLNFDDFEEDFHLIVSNCLKYNAKDTIFYRAAVR 722

Query: 120 IHELAKKNFENLRQDSD 136
           + E         R+ +D
Sbjct: 723 LREQGGTVLRQARRQAD 739


>gi|380796911|gb|AFE70331.1| bromodomain-containing protein 1, partial [Macaca mulatta]
          Length = 1055

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 591 KEVPDYLDHIKQPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 650

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 651 RLRDQGGVVLRQARREVD 668


>gi|427788533|gb|JAA59718.1| Hypothetical protein [Rhipicephalus pulchellus]
          Length = 1073

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 52/111 (46%), Gaps = 17/111 (15%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY   I+ PMDF T+  KL    Y +LE FE D  LI  N M YN+ DT+Y++ A  
Sbjct: 610 EVPDYLNYIQKPMDFWTMEQKLKRHEYTSLEDFEADFHLIVDNCMTYNSRDTLYYKAAVR 669

Query: 120 IHELAKKNFENLRQDSD--DNEPETKV---------------VRRGRPPTK 153
           + E         R  +D    +P T +                RRGRPP +
Sbjct: 670 MREQGNSVISQARAAADRCGYDPATGMHLPDSALTAPAVPVKGRRGRPPKR 720


>gi|350287912|gb|EGZ69148.1| hypothetical protein NEUTE2DRAFT_72452 [Neurospora tetrasperma FGSC
           2509]
          Length = 1223

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%)

Query: 44  KSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNA 103
           + Y  +S     ++   LPDY EVI+ PM F T+R KL   +Y +  +F +DV  IC NA
Sbjct: 149 EDYEIASGFQRLVNKRSLPDYFEVIKTPMAFSTIRGKLGKKSYTSFNEFVQDVTRICHNA 208

Query: 104 MQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRG 148
             YN P    F  A  + E+ K+    L Q  D  E + ++   G
Sbjct: 209 QVYNRPSAPIFSDAGRLLEVFKEKLAELVQKGDITEKDAEIPDYG 253


>gi|402884618|ref|XP_003905773.1| PREDICTED: bromodomain-containing protein 1 isoform 2 [Papio
           anubis]
 gi|402884620|ref|XP_003905774.1| PREDICTED: bromodomain-containing protein 1 isoform 3 [Papio
           anubis]
          Length = 1058

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKQPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|384940824|gb|AFI34017.1| bromodomain-containing protein 1 [Macaca mulatta]
          Length = 1058

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKQPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|327278588|ref|XP_003224043.1| PREDICTED: bromodomain-containing protein 7-like [Anolis
           carolinensis]
          Length = 651

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+ PMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 163 PGYSMIIKRPMDFSTMKEKIKNNGYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 222

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 223 HSGMKILSQERIQSLKQSID 242


>gi|109094587|ref|XP_001111352.1| PREDICTED: bromodomain-containing protein 1-like isoform 2 [Macaca
           mulatta]
          Length = 1059

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T+R +L    Y  L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKQPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671


>gi|126336167|ref|XP_001365219.1| PREDICTED: peregrin isoform 1 [Monodelphis domestica]
          Length = 1219

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 44/77 (57%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 669 EVPDYLEHIKKPMDFSTMKQNLEAYRYLNFDDFEEDFHLIVSNCLKYNAKDTIFYRAAVR 728

Query: 120 IHELAKKNFENLRQDSD 136
           + E         R+ +D
Sbjct: 729 LREQGGTVLRQARRQAD 745


>gi|405122170|gb|AFR96937.1| hypothetical protein CNAG_04205 [Cryptococcus neoformans var.
           grubii H99]
          Length = 672

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 45/71 (63%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           PDY  VI+ PMD  T++ K+ +G    +++ E+DV L+ SNAM YNAPD+  +  A+ + 
Sbjct: 592 PDYYSVIKKPMDLKTIKGKIKDGRIERIDELERDVLLMFSNAMMYNAPDSQVYEMAKEMM 651

Query: 122 ELAKKNFENLR 132
           +  + +F + R
Sbjct: 652 KDCEGHFAHFR 662


>gi|395516558|ref|XP_003762454.1| PREDICTED: peregrin [Sarcophilus harrisii]
          Length = 1212

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 44/77 (57%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 662 EVPDYLEHIKKPMDFSTMKQNLEAYRYLNFDDFEEDFHLIVSNCLKYNAKDTIFYRAAVR 721

Query: 120 IHELAKKNFENLRQDSD 136
           + E         R+ +D
Sbjct: 722 LREQGGTVLRQARRQAD 738


>gi|427788799|gb|JAA59851.1| hypothetical protein [Rhipicephalus pulchellus]
          Length = 797

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 40/59 (67%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I +PMDF T++ K+ +  Y  + +F +D+ L+C NAM YN PDT+YF+ A+ +
Sbjct: 235 PGYSTIIHNPMDFSTMKKKIDDCEYTCVSEFREDLKLMCDNAMTYNRPDTVYFKSAKRM 293


>gi|269994448|dbj|BAI50388.1| bromodomain containing 7 [Leiolepis reevesii rubritaeniata]
          Length = 260

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+ PMDF T++ K+ N  Y ++E+ + +  L+C+NAM YN P+TIY++ A+ + 
Sbjct: 119 PGYSMIIKRPMDFSTMKEKIKNNGYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 178

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 179 HSGMKILSQERIQSLKQSID 198


>gi|395329535|gb|EJF61921.1| hypothetical protein DICSQDRAFT_154810 [Dichomitus squalens
           LYAD-421 SS1]
          Length = 838

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 43/69 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DP ++P Y +V+  PMDFGT+  K+  G Y +LE+F  DV L+ +NA  +N   +IY+ 
Sbjct: 89  VDPTQVPGYSDVVSKPMDFGTISTKVEKGRYRSLEEFASDVRLVTTNAKTFNPLGSIYYT 148

Query: 116 QARSIHELA 124
           +A  I   A
Sbjct: 149 EAERIESYA 157


>gi|432852996|ref|XP_004067489.1| PREDICTED: bromodomain-containing protein 7-like [Oryzias latipes]
          Length = 607

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+ PMDF T++ K+  G + +L++ + D  L+C NAM YN P+TIY + AR + 
Sbjct: 149 PGYSSIIKRPMDFSTMKEKVKKGCFRSLDELKTDFKLMCDNAMIYNKPETIYHKAARKLL 208

Query: 122 E-----LAKKNFENLRQ 133
                 L+++  E+L+Q
Sbjct: 209 HSGMKILSQERLESLKQ 225


>gi|242070257|ref|XP_002450405.1| hypothetical protein SORBIDRAFT_05g004810 [Sorghum bicolor]
 gi|241936248|gb|EES09393.1| hypothetical protein SORBIDRAFT_05g004810 [Sorghum bicolor]
          Length = 605

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 47/73 (64%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY +VI +PMD GTV+NKL    Y ++E+F  DV L  SNAM+YN P+    + A+ +
Sbjct: 93  IPDYFDVIHNPMDLGTVKNKLTKKQYVSIEEFAADVRLTFSNAMKYNPPENDVHKVAKEL 152

Query: 121 HELAKKNFENLRQ 133
           + +    +E++ +
Sbjct: 153 NGIFDSEWESVER 165


>gi|291243501|ref|XP_002741640.1| PREDICTED: bromodomain containing 7-like [Saccoglossus kowalevskii]
          Length = 594

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 10/99 (10%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +++H MDF T++ +L N  Y ++E ++ D+ L+C NAM YN P+TIY++ A+ + 
Sbjct: 166 PGYSSIVQHAMDFSTMQQRLDNDEYHSIESYKADMKLMCDNAMLYNRPETIYYKVAKKLL 225

Query: 122 ELAKKNFENLR----------QDSDDNEPETKVVRRGRP 150
               K     R          +  DD+ P T  ++  RP
Sbjct: 226 NYGLKIMSKERIIPLKRAMGFEIDDDDHPITTSIKIKRP 264


>gi|47229814|emb|CAG07010.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1523

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 7/82 (8%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R+KL    Y ++   EKD  L+ SN ++YN+ DT++ + A  
Sbjct: 615 EVPDYLEFISQPMDFATMRSKLEGHVYCSISDLEKDFDLVISNCLKYNSKDTMFHKAALQ 674

Query: 120 IHEL-------AKKNFENLRQD 134
           + E+       A++ F+++  D
Sbjct: 675 LREVGGAILRQAQRQFQSMGLD 696


>gi|440794447|gb|ELR15608.1| bromodomain domain containing protein [Acanthamoeba castellanii
           str. Neff]
          Length = 939

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 45/73 (61%)

Query: 58  PEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           P+++P Y E+I+ PM F  ++ KL  G Y T   F+ DV LIC N + +N  D++Y+ +A
Sbjct: 437 PDDVPGYHEMIKRPMAFSDMKVKLDEGQYHTAALFQADVKLICDNCVTFNPDDSMYYEEA 496

Query: 118 RSIHELAKKNFEN 130
             + E AK+ ++ 
Sbjct: 497 EKLREYAKQQYKT 509


>gi|348523507|ref|XP_003449265.1| PREDICTED: bromodomain-containing protein 1-like [Oreochromis
           niloticus]
          Length = 1058

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 44/64 (68%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY ++I++PMDF T+R ++    Y +LE FE D  LI SN M YNA DT +++ A+
Sbjct: 596 KEVPDYLDIIKNPMDFSTMRKRIDAHFYRSLEGFEADFDLIISNCMTYNAKDTFFYKAAQ 655

Query: 119 SIHE 122
            + +
Sbjct: 656 RMQD 659


>gi|198282069|ref|NP_001128279.1| bromodomain and PHD finger containing, 3 [Xenopus (Silurana)
           tropicalis]
 gi|197245583|gb|AAI68469.1| LOC779492 protein [Xenopus (Silurana) tropicalis]
          Length = 983

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 2/101 (1%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY   I HPMDF T+R KL    Y +L  FE D  L+ SN ++YN+ +T++ + A 
Sbjct: 604 KEVPDYRNFIVHPMDFSTMRQKLEGHQYTSLHAFEDDFNLMVSNCLRYNSQETVFHQAAL 663

Query: 119 SIHELAKKNFENLRQ--DSDDNEPETKVVRRGRPPTKNFKK 157
            +H+L      + R+  +S   +P+T +    +P T ++ +
Sbjct: 664 RLHQLGAAILRHARRQVESTGYDPQTCLHLPEQPRTADYYR 704


>gi|340367852|ref|XP_003382467.1| PREDICTED: hypothetical protein LOC100638155 [Amphimedon
           queenslandica]
          Length = 971

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 45/71 (63%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           E  P Y  +I+ PMD  T+ NK+    Y ++ +F++D  ++CSNAM YN+P+T+Y++ A+
Sbjct: 388 EIAPGYSAIIKQPMDLQTMMNKVELNEYPSVNEFKEDFIIMCSNAMTYNSPETVYYQTAK 447

Query: 119 SIHELAKKNFE 129
            +  L  K  +
Sbjct: 448 RLLNLGLKMIQ 458


>gi|70950317|ref|XP_744492.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56524468|emb|CAH77668.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
          Length = 407

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 41/66 (62%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY  +I+ PMDF T++ K+ N  Y T E+FE+D+FLI +N   YN   TIY + A  +
Sbjct: 46  VPDYLNIIKEPMDFTTMKQKIQNFKYNTYEEFERDIFLIINNCYTYNDKTTIYHKIAEGL 105

Query: 121 HELAKK 126
               +K
Sbjct: 106 EAYYRK 111


>gi|336368694|gb|EGN97037.1| hypothetical protein SERLA73DRAFT_58213 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 1092

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 4/135 (2%)

Query: 1   MQSVVDLAVLTVKRERRLFLV--RIQQITTKGLSWNWDPQRLYQIKSYCCSSSIDFK--M 56
           ++++ DLA+LT KRE R  +    +Q++    L  +  P RL   +         FK  +
Sbjct: 423 LEAIRDLALLTRKRESRKLVQAESMQKVIGLALLPHEPPLRLAFERILALDRQGLFKNPV 482

Query: 57  DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQ 116
              E+PDY +VI++PM +  + NKL    Y  L+ F+ D+ L+ +NAM YN P T++++ 
Sbjct: 483 SKAEVPDYYDVIQNPMCWNIIDNKLDRHEYWDLQSFKGDIDLVLTNAMIYNKPGTLFYKT 542

Query: 117 ARSIHELAKKNFENL 131
           A+ +   ++     L
Sbjct: 543 AQRVQSTSQTILSEL 557


>gi|410905331|ref|XP_003966145.1| PREDICTED: bromodomain-containing protein 9-like [Takifugu
           rubripes]
          Length = 646

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 40/59 (67%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y   I+HPMDF T+++K+ N  Y T+ +F+ D  L+C NA  YN P+T+Y++ A+ +
Sbjct: 210 PGYSTFIKHPMDFSTMKDKIINNEYNTVTEFKADFKLMCDNATVYNRPETVYYKAAKKL 268


>gi|47205952|emb|CAF90865.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 744

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 43/69 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D +E+PDY E I  PMDF T+++KL + AY ++   E D  L+ SN + YN  DT+Y R
Sbjct: 141 VDIKEVPDYAEFISQPMDFSTMQSKLESHAYRSVGDLEDDFNLMISNCLLYNTKDTVYHR 200

Query: 116 QARSIHELA 124
            A  + EL 
Sbjct: 201 TALRLRELG 209


>gi|198424383|ref|XP_002127163.1| PREDICTED: similar to bromodomain containing 7 [Ciona intestinalis]
          Length = 610

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 39/60 (65%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P+Y  VI+ PMDF T+RNK+ N  Y  +  F++D  L+  N   YN PDTIY++ A+ +H
Sbjct: 154 PEYSTVIDKPMDFSTMRNKILNNEYVDVNGFKEDFELMTRNCCVYNKPDTIYYQIAKKVH 213


>gi|432864388|ref|XP_004070297.1| PREDICTED: bromodomain and PHD finger-containing protein 3-like
           [Oryzias latipes]
          Length = 1199

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 43/66 (65%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY E I HPMDF T+R+KL +  Y ++ + E D  L+ SN + YNA DT++ R A 
Sbjct: 620 KEVPDYLEFISHPMDFTTMRSKLESHLYCSVSELEADFNLMVSNCLLYNARDTVFHRAAL 679

Query: 119 SIHELA 124
            + +L 
Sbjct: 680 HLRDLG 685


>gi|431899568|gb|ELK07531.1| Bromodomain-containing protein 1 [Pteropus alecto]
          Length = 1188

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T+R +L    Y +L +FE+D  LI  N M+YNA DT+++R A 
Sbjct: 594 KEVPDYLDHIKQPMDFATMRKRLEAQGYRSLLEFEEDFDLIVDNCMRYNAKDTVFYRAAV 653

Query: 119 SIHELAKKNFENLRQDSD 136
            + +         R+  D
Sbjct: 654 RLRDQGGVVLRQARRQVD 671


>gi|385199193|gb|AFI44975.1| bromodomain and PHD finger-containing protein, partial [Protoplasa
           sp. GRC-2012]
          Length = 720

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 7/81 (8%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HPMD  T+R KL +G Y +L+    D  L+  N + YN  DT+Y+R
Sbjct: 354 VDITEVPDYTDIVKHPMDLSTMRMKLLSGMYPSLDDMAADFNLMIRNCLAYNTKDTMYYR 413

Query: 116 -------QARSIHELAKKNFE 129
                  Q  S+ ++A+K  E
Sbjct: 414 AGVRMRDQGGSLFKMARKELE 434


>gi|345326866|ref|XP_001506320.2| PREDICTED: bromodomain-containing protein 4 [Ornithorhynchus
           anatinus]
          Length = 719

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 385 LHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPPDHEVVAMARKL 444

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 445 QDVFEMRFAKM-----PDEPEEPVVAVSSPVLPPPTKVVAPP 481



 Score = 45.8 bits (107), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 33/63 (52%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT+R +L N  Y    +  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIRKRLENNYYWNAHECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|427785339|gb|JAA58121.1| Putative bromodomain-containing protein 4 [Rhipicephalus
           pulchellus]
          Length = 1295

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+HPMD GTV+ K+ N  Y + E+F  DV LI +N  +YN PD      AR +
Sbjct: 415 LHDYHEIIKHPMDLGTVKQKMDNREYKSPEEFAGDVRLIFTNCYKYNPPDHEVVAMARKL 474

Query: 121 HELAKKNFENLRQDSDDNEPE 141
            ++ +  +  +  +   +EP+
Sbjct: 475 QDVFEMRYAKMPDEPPPSEPQ 495



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           LPDY  +I HPMD GT++ +L +  Y++ ++  +D   + +N   YN P  D +   QA
Sbjct: 94  LPDYHRIIRHPMDLGTIKKRLEHCYYSSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQA 152


>gi|66912019|gb|AAH97528.1| LOC443648 protein, partial [Xenopus laevis]
          Length = 572

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 1/98 (1%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYCE+I+HPMD GT++ K+ N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 405 LHDYCEIIKHPMDLGTIKVKMENRDYKEAQEFASDVRLMFSNCYKYNPPDHEVVIMARKL 464

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKP 158
            ++ +  F  +  + ++       +  G PP  + K P
Sbjct: 465 QDVFEMRFAKMPDEPEEAPAPVPSLAPG-PPAPSIKGP 501



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYHKIIKTPMDMGTIKKRLENHYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    + Q+    E E  VV+   RGR
Sbjct: 154 EKLFLQKISEMPQE----ETELTVVQSKGRGR 181


>gi|49118460|gb|AAH73443.1| LOC443648 protein, partial [Xenopus laevis]
          Length = 559

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 1/98 (1%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYCE+I+HPMD GT++ K+ N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 405 LHDYCEIIKHPMDLGTIKVKMENRDYKEAQEFASDVRLMFSNCYKYNPPDHEVVIMARKL 464

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKP 158
            ++ +  F  +  + ++       +  G PP  + K P
Sbjct: 465 QDVFEMRFAKMPDEPEEAPAPVPSLAPG-PPAPSIKGP 501



 Score = 46.6 bits (109), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYHKIIKTPMDMGTIKKRLENHYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    + Q+    E E  VV+   RGR
Sbjct: 154 EKLFLQKISEMPQE----ETELTVVQSKGRGR 181


>gi|449679829|ref|XP_002163708.2| PREDICTED: bromodomain-containing protein 7-like [Hydra
           magnipapillata]
          Length = 611

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 39/59 (66%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y ++I  PMDF T+  K+    YA++E F+ D  ++C+NAM+YN  DTIY++ A  +
Sbjct: 157 PGYSKIIRQPMDFQTMALKIERNEYASIESFKDDYIIMCNNAMRYNGSDTIYYKSAEKM 215


>gi|429847536|gb|ELA23132.1| rsc complex subunit [Colletotrichum gloeosporioides Nara gc5]
          Length = 1041

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 44/72 (61%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           +LPDY E+IE+P+ F T+R+K++   Y    +F +DV  IC NA  YN P +  F+ A  
Sbjct: 170 QLPDYFEIIENPIAFSTIRHKISKKQYNDFSEFVRDVAQICHNAQVYNRPSSAIFKGATV 229

Query: 120 IHELAKKNFENL 131
           I +L K+  + L
Sbjct: 230 IRDLLKQELQKL 241



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 32/63 (50%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           PDY +VI+ P+    ++ K     Y T++   KD+ L+ +NA  YN   +  F  A  + 
Sbjct: 373 PDYYQVIKDPIALDNIKRKAKRKKYPTVDSVLKDIDLMFNNAKHYNEEGSEIFEAAVELQ 432

Query: 122 ELA 124
           + A
Sbjct: 433 KQA 435


>gi|327266272|ref|XP_003217930.1| PREDICTED: peregrin-like [Anolis carolinensis]
          Length = 1205

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 43/63 (68%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++ KL    Y  L++FE+D  LI +N ++YNA DTI++R A  
Sbjct: 659 EVPDYLDHIKKPMDFYTMKQKLEGYHYLNLDEFEEDFNLIVTNCLKYNAKDTIFYRAAVR 718

Query: 120 IHE 122
           + E
Sbjct: 719 LRE 721


>gi|410907642|ref|XP_003967300.1| PREDICTED: bromodomain-containing protein 1-like [Takifugu
           rubripes]
          Length = 1107

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 45/64 (70%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY E I++PMDF T+R ++    Y +L++FE+D  LI SN + YNA DT +++ A+
Sbjct: 592 KEVPDYLEHIKNPMDFSTMRRRIDKHQYRSLDEFEEDFNLIISNCLMYNAKDTFFYKAAQ 651

Query: 119 SIHE 122
            + +
Sbjct: 652 RMQD 655


>gi|66820664|ref|XP_643914.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
 gi|60472230|gb|EAL70183.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
          Length = 571

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 43/71 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E PDY  VI+H MD  T++ KL +  Y T  +F KDV LI  NAM YN  D+  +  A 
Sbjct: 306 DEAPDYDSVIKHRMDLTTLKKKLDDQVYNTCSEFSKDVILIFKNAMIYNQEDSDIYNMAA 365

Query: 119 SIHELAKKNFE 129
           S+ ++A+K  E
Sbjct: 366 SMKKIAEKEME 376


>gi|410912238|ref|XP_003969597.1| PREDICTED: bromodomain-containing protein 7-like [Takifugu
           rubripes]
          Length = 618

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+ PMDF T+++K+    Y  L++ + D  ++C NAM YN PDTIY + AR + 
Sbjct: 149 PGYSSIIKRPMDFSTMKDKVKKECYQCLDELKVDFKIMCENAMIYNKPDTIYHKAARKLL 208

Query: 122 E-----LAKKNFENLRQ 133
                 L+++  E+L+Q
Sbjct: 209 HSGMKILSQERLESLKQ 225


>gi|348521834|ref|XP_003448431.1| PREDICTED: bromodomain-containing protein 1-like [Oreochromis
           niloticus]
          Length = 1164

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 41/65 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL   AY ++   E+D  L+ SN ++YN+ DT++ R A  
Sbjct: 624 EVPDYLEFITQPMDFSTMRTKLEGHAYCSITDLEEDFDLMISNCLKYNSKDTMFHRAALQ 683

Query: 120 IHELA 124
           + E+ 
Sbjct: 684 LREVG 688


>gi|193202233|ref|NP_001122414.1| Protein SWSN-9, isoform b [Caenorhabditis elegans]
 gi|148472861|emb|CAN86573.1| Protein SWSN-9, isoform b [Caenorhabditis elegans]
          Length = 582

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 45/75 (60%)

Query: 54  FKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
           F + P   PDY ++I+ PMD  T+R  + +G YA+L   ++D  LI SNA QYN P+T++
Sbjct: 174 FPVTPSMAPDYRDIIKTPMDLQTIRENIEDGKYASLPAMKEDCELIVSNAFQYNQPNTVF 233

Query: 114 FRQARSIHELAKKNF 128
           +  A+ +  L    F
Sbjct: 234 YLAAKRLSNLIAYYF 248


>gi|241714215|ref|XP_002413502.1| bromodomain-containing protein, putative [Ixodes scapularis]
 gi|215507316|gb|EEC16810.1| bromodomain-containing protein, putative [Ixodes scapularis]
          Length = 569

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 10/76 (13%)

Query: 55  KMDPEEL----------PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAM 104
           K DP+E           P Y  +I  PMDF T+R K+ +G Y+ + +F  D+ L+C NAM
Sbjct: 161 KRDPKEFFTWPVSDVLAPGYSNIIHSPMDFSTMRKKIDDGDYSCVSEFRDDLKLMCDNAM 220

Query: 105 QYNAPDTIYFRQARSI 120
            YN  DT+Y++ A+ +
Sbjct: 221 TYNRSDTVYYKSAKRM 236


>gi|195114744|ref|XP_002001927.1| GI17104 [Drosophila mojavensis]
 gi|193912502|gb|EDW11369.1| GI17104 [Drosophila mojavensis]
          Length = 857

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 42/68 (61%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I  PMDF T+R K+ +  YA L +F  D  L+C NA++YN  DT+Y + A+ + 
Sbjct: 307 PGYSSIIHKPMDFSTMRQKIEDHEYAALSEFTDDFRLMCENAIKYNHVDTVYHKAAKRLL 366

Query: 122 ELAKKNFE 129
           +L  K+ +
Sbjct: 367 QLGLKHLQ 374


>gi|123408507|ref|XP_001303211.1| Bromodomain containing protein [Trichomonas vaginalis G3]
 gi|121884572|gb|EAX90281.1| Bromodomain containing protein [Trichomonas vaginalis G3]
          Length = 156

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 20/148 (13%)

Query: 20  LVRIQQITTKGLSWNWDPQRLYQIKSYCCSSSIDFKMDPEE--LPDYCEVIEHPMDFGTV 77
           L +  QI  K +SW              CS  ++  +DPE    PDY EV+++PM    V
Sbjct: 8   LTKCLQIIEKLISWQ------------ICSPFVEL-VDPERDGAPDYLEVVKNPMALREV 54

Query: 78  RNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDD 137
           + KL +GAY+ L+QF+ DV LI SNA  YN  DT++   A     L    + N +     
Sbjct: 55  QKKLNDGAYSNLDQFKDDVDLIWSNAKLYNGDDTLFTHMA-----LEAAQWFNEKMKRFP 109

Query: 138 NEPETKVVRRGRPPTKNFKKPLGRPSLE 165
           + PE +  R+ +  T+     L  P +E
Sbjct: 110 STPEEEWTRKIQRTTQKLLGVLLHPPVE 137


>gi|348502973|ref|XP_003439041.1| PREDICTED: peregrin isoform 1 [Oreochromis niloticus]
          Length = 1281

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 46/77 (59%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T+ N L +  Y T E FE D  LI +N ++YNA DT+++R A  
Sbjct: 730 EVPDYLDHIDTPMDFQTMWNLLESHRYLTFEAFEADFGLIVNNCLKYNAKDTVFYRAALR 789

Query: 120 IHELAKKNFENLRQDSD 136
           + E+        R+ ++
Sbjct: 790 LREMGGAVIRTARRQAE 806


>gi|380496339|emb|CCF31793.1| chromatin structure-remodeling complex protein RSC2 [Colletotrichum
           higginsianum]
          Length = 1087

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 43/72 (59%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           +LPDY E+IE+P+ F T+R+K+    Y    +F +DV  IC NA  YN P +  F+ A  
Sbjct: 141 QLPDYFEIIENPVAFSTIRHKVQKKQYTQFSEFVRDVAQICHNAQVYNRPSSAIFKSATI 200

Query: 120 IHELAKKNFENL 131
           I +L K+  + L
Sbjct: 201 IRDLLKQELQKL 212


>gi|320593682|gb|EFX06091.1| rsc complex subunit [Grosmannia clavigera kw1407]
          Length = 1011

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 48/91 (52%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY +VI+ P+ F T+R K+    Y++  QF +DV LIC NA  YN P    F+ A  +
Sbjct: 131 LPDYFDVIKEPVAFSTIRGKVQKKQYSSFSQFVRDVALICHNAQVYNRPSAPIFQDAMRL 190

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGRPP 151
             + K+  + L +D      E ++   G  P
Sbjct: 191 QAVTKEKLQELVRDGSIGAEEAELPDLGEIP 221



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 57  DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQ 116
           D  +LP+Y E I+ PM    +R +L    Y+++EQ   DV  +C+NA ++N   +  F  
Sbjct: 324 DRTQLPEYYEEIKQPMALDVIRRRLRRKQYSSVEQAMADVEQMCNNAQRFNEDGSAIFEA 383

Query: 117 ARSIH----ELAKKNFENLRQDSD 136
           A ++     ELA +     R DSD
Sbjct: 384 AVALQGRSRELAAQQLS--RPDSD 405


>gi|410919935|ref|XP_003973439.1| PREDICTED: bromodomain and PHD finger-containing protein 3-like
           [Takifugu rubripes]
          Length = 1169

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 41/65 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMDF T+R KL   AY ++   EKD  L+ SN ++YN+ DT++ + A  
Sbjct: 631 EVPDYLEFILQPMDFSTMRTKLEGHAYCSISDLEKDFDLVISNCLKYNSKDTMFHKAALQ 690

Query: 120 IHELA 124
           + E+ 
Sbjct: 691 LREVG 695


>gi|354485151|ref|XP_003504747.1| PREDICTED: bromodomain-containing protein 4 [Cricetulus griseus]
          Length = 721

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 388 LHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 447

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            E+ +  F  +      +EPE  VV        PPTK   +P
Sbjct: 448 QEVFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAQP 484



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|131889088|ref|NP_001076499.1| bromodomain containing 1b [Danio rerio]
 gi|124481888|gb|AAI33133.1| Zgc:158610 protein [Danio rerio]
          Length = 1080

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 41/56 (73%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           E+PDY + I+HPMDF T+R ++    Y +L++FE+D  LI +N ++YNA DT ++R
Sbjct: 588 EVPDYLDHIKHPMDFSTMRKRIDGHEYQSLDEFEEDFNLIINNCLKYNAKDTYFYR 643


>gi|348502975|ref|XP_003439042.1| PREDICTED: peregrin isoform 2 [Oreochromis niloticus]
          Length = 1286

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 46/77 (59%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T+ N L +  Y T E FE D  LI +N ++YNA DT+++R A  
Sbjct: 730 EVPDYLDHIDTPMDFQTMWNLLESHRYLTFEAFEADFGLIVNNCLKYNAKDTVFYRAALR 789

Query: 120 IHELAKKNFENLRQDSD 136
           + E+        R+ ++
Sbjct: 790 LREMGGAVIRTARRQAE 806


>gi|148232443|ref|NP_001086546.1| bromodomain containing 4 [Xenopus laevis]
 gi|49899749|gb|AAH76786.1| Brd4-prov protein [Xenopus laevis]
          Length = 1362

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 43/75 (57%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYCE+I+HPMD GT++ K+ N  Y   + F  DV L+ SN  +YN PD      AR + +
Sbjct: 406 DYCEIIKHPMDLGTIKVKMENCDYKNAQDFASDVRLMFSNCYKYNPPDHEVVIMARKLQD 465

Query: 123 LAKKNFENLRQDSDD 137
           + +  F  +  + ++
Sbjct: 466 VFEMRFAKMPDEPEE 480



 Score = 46.2 bits (108), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 93  LPDYYKIIKTPMDMGTIKKRLENHFYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 152

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    + Q+    E E  VV+   RGR
Sbjct: 153 EKLFLQKISEMPQE----ETELAVVQCKGRGR 180


>gi|159507460|gb|ABW97743.1| bromodomain 4 [Xenopus laevis]
          Length = 1366

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 43/75 (57%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYCE+I+HPMD GT++ K+ N  Y   + F  DV L+ SN  +YN PD      AR + +
Sbjct: 406 DYCEIIKHPMDLGTIKVKMENCDYKNAQDFASDVRLMFSNCYKYNPPDHEVVIMARKLQD 465

Query: 123 LAKKNFENLRQDSDD 137
           + +  F  +  + ++
Sbjct: 466 VFEMRFAKMPDEPEE 480



 Score = 46.2 bits (108), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 93  LPDYYKIIKTPMDMGTIKKRLENHFYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 152

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    + Q+    E E  VV+   RGR
Sbjct: 153 EKLFLQKISEMPQE----ETELAVVQCKGRGR 180


>gi|402589337|gb|EJW83269.1| hypothetical protein WUBG_05821 [Wuchereria bancrofti]
          Length = 635

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 41/67 (61%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           PDY E+I+ PMDF T+R K+    Y  +  F+KD  LI  NAM YN+P T+Y+  A+ + 
Sbjct: 191 PDYHEIIKEPMDFATIRQKIDRDDYPDIATFKKDAELIVHNAMDYNSPGTVYYIAAQKMD 250

Query: 122 ELAKKNF 128
            + +  F
Sbjct: 251 LIVQFYF 257


>gi|148230679|ref|NP_001082592.1| bromodomain-containing protein 7 [Xenopus laevis]
 gi|29570597|gb|AAO85270.1| nuclear transcriptor-like protein [Xenopus laevis]
 gi|47124770|gb|AAH70751.1| BRD7 protein [Xenopus laevis]
          Length = 638

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR--- 118
           P Y  +I++PMDF T++ K+ N  Y ++E+F+++   IC NAM YN P TIY+R A+   
Sbjct: 169 PGYSLIIKNPMDFSTMKEKIRNCEYRSIEEFKENFKQICHNAMIYNKPGTIYYRAAKKLL 228

Query: 119 --SIHELAKKNFENLRQ 133
              I  L+++  ++L+Q
Sbjct: 229 NSGIKILSQERIQSLKQ 245


>gi|344239383|gb|EGV95486.1| Bromodomain-containing protein 4 [Cricetulus griseus]
          Length = 723

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 388 LHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 447

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            E+ +  F  +      +EPE  VV        PPTK   +P
Sbjct: 448 QEVFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAQP 484



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|17505438|ref|NP_492041.1| Protein SWSN-9, isoform a [Caenorhabditis elegans]
 gi|3873909|emb|CAA95779.1| Protein SWSN-9, isoform a [Caenorhabditis elegans]
          Length = 636

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 45/75 (60%)

Query: 54  FKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
           F + P   PDY ++I+ PMD  T+R  + +G YA+L   ++D  LI SNA QYN P+T++
Sbjct: 174 FPVTPSMAPDYRDIIKTPMDLQTIRENIEDGKYASLPAMKEDCELIVSNAFQYNQPNTVF 233

Query: 114 FRQARSIHELAKKNF 128
           +  A+ +  L    F
Sbjct: 234 YLAAKRLSNLIAYYF 248


>gi|242013215|ref|XP_002427310.1| Bromodomain-containing protein, putative [Pediculus humanus
           corporis]
 gi|212511651|gb|EEB14572.1| Bromodomain-containing protein, putative [Pediculus humanus
           corporis]
          Length = 690

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 38/59 (64%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I  PMDF T++ K+ +  Y+TL  F  D  L+C+NAM YN  DTIY++ AR +
Sbjct: 196 PGYSNIITQPMDFSTIKQKIDDHLYSTLSDFIGDFKLMCNNAMTYNHQDTIYYKAARKL 254


>gi|163914953|ref|NP_001106468.1| bromodomain and PHD finger containing, 1 [Xenopus (Silurana)
           tropicalis]
 gi|158254020|gb|AAI54089.1| LOC100127652 protein [Xenopus (Silurana) tropicalis]
          Length = 930

 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 41/63 (65%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E ++ PMDF T++  L    Y   +QFE+D  LI +N ++YNA DTI++R A  
Sbjct: 377 EVPDYLEHVKKPMDFQTMKRNLEAFRYQNFDQFEEDFNLIVNNCIKYNAKDTIFYRAASR 436

Query: 120 IHE 122
           + E
Sbjct: 437 LRE 439


>gi|385199201|gb|AFI44979.1| bromodomain and PHD finger-containing protein, partial [Neoarisemus
           sp. nov. Thailand]
          Length = 655

 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 40/60 (66%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+ DY ++++HPMD  T+RNKL +G Y TL+  E D  L+  N + YN  DT+Y+R
Sbjct: 323 VDTNEVTDYMDIVKHPMDLSTMRNKLDSGMYYTLDDMEADFDLMIRNCLAYNNRDTMYYR 382


>gi|349805091|gb|AEQ18018.1| hypothetical protein [Hymenochirus curtipes]
          Length = 497

 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 42/71 (59%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYCE+I+HPMD GT++ K+ N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 129 LHDYCEIIKHPMDLGTIKVKMENREYKEPQEFAADVRLMFSNCYKYNPPDHEVVIMARKL 188

Query: 121 HELAKKNFENL 131
            ++ +  F  +
Sbjct: 189 QDVFEMRFAKM 199


>gi|340729726|ref|XP_003403147.1| PREDICTED: LOW QUALITY PROTEIN: peregrin-like [Bombus terrestris]
          Length = 898

 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 47/82 (57%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY E++ HPMDF T++ K+    Y T+  FE D  L+ SN + YN  DT+++R   
Sbjct: 555 KEVPDYLEIVSHPMDFSTMQIKIERQEYDTIGAFEADFNLVVSNCLAYNRKDTMFYRAGI 614

Query: 119 SIHELAKKNFENLRQDSDDNEP 140
            + E      +  R+D  + +P
Sbjct: 615 KMKEQGGALIDQARKDYPELDP 636


>gi|330792873|ref|XP_003284511.1| hypothetical protein DICPUDRAFT_75494 [Dictyostelium purpureum]
 gi|325085541|gb|EGC38946.1| hypothetical protein DICPUDRAFT_75494 [Dictyostelium purpureum]
          Length = 1321

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 49/77 (63%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DY   I+ PMDFGT++N +  G Y T+++F +DV L+ SNA  YN P  +    A+++ +
Sbjct: 680 DYFNFIKRPMDFGTIKNSIVGGVYHTIDEFAEDVRLVFSNAKAYNPPANLVHIMAKTLED 739

Query: 123 LAKKNFENLRQDSDDNE 139
           L ++ F  + ++ D+++
Sbjct: 740 LFEEKFPQVIEEPDESD 756


>gi|341038407|gb|EGS23399.1| hypothetical protein CTHT_0000880 [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 887

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 2/86 (2%)

Query: 40  LYQIKSYCCSSSIDFKMDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           L + K Y  +++    +DP  L  P Y ++I+ PMD GT+ NKLA G Y+ +++FEKD  
Sbjct: 489 LRKAKYYEFNTAFLQPVDPVALNIPSYHKIIKKPMDLGTMANKLAAGEYSNIKEFEKDFE 548

Query: 98  LICSNAMQYNAPDTIYFRQARSIHEL 123
           LI  N   +N  D I + QA  + +L
Sbjct: 549 LIIKNCRTFNGEDHIVYHQALKLQDL 574


>gi|427798983|gb|JAA64943.1| Putative bromodomain-containing protein 2, partial [Rhipicephalus
           pulchellus]
          Length = 852

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+HPMD GTV+ K+ N  Y + E+F  DV LI +N  +YN PD      AR +
Sbjct: 415 LHDYHEIIKHPMDLGTVKQKMDNREYKSPEEFAGDVRLIFTNCYKYNPPDHEVVAMARKL 474

Query: 121 HELAKKNFENLRQDSDDNEPE 141
            ++ +  +  +  +   +EP+
Sbjct: 475 QDVFEMRYAKMPDEPPPSEPQ 495



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           LPDY  +I HPMD GT++ +L +  Y++ ++  +D   + +N   YN P  D +   QA
Sbjct: 94  LPDYHRIIRHPMDLGTIKKRLEHCYYSSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQA 152


>gi|427780035|gb|JAA55469.1| Putative bromodomain-containing protein 2 [Rhipicephalus
           pulchellus]
          Length = 873

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+HPMD GTV+ K+ N  Y + E+F  DV LI +N  +YN PD      AR +
Sbjct: 434 LHDYHEIIKHPMDLGTVKQKMDNREYKSPEEFAGDVRLIFTNCYKYNPPDHEVVAMARKL 493

Query: 121 HELAKKNFENLRQDSDDNEPE 141
            ++ +  +  +  +   +EP+
Sbjct: 494 QDVFEMRYAKMPDEPPPSEPQ 514



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           LPDY  +I HPMD GT++ +L +  Y++ ++  +D   + +N   YN P  D +   QA
Sbjct: 94  LPDYHRIIRHPMDLGTIKKRLEHCYYSSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQA 152


>gi|91087827|ref|XP_967270.1| PREDICTED: similar to AGAP007617-PA [Tribolium castaneum]
 gi|270011999|gb|EFA08447.1| hypothetical protein TcasGA2_TC006094 [Tribolium castaneum]
          Length = 1031

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 45/79 (56%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D EE+PDY  V+  PMD  T+R KL +G Y  L   EKD  L+ +N + YN  DT+++R
Sbjct: 595 VDLEEVPDYTTVVSEPMDLSTMRKKLDDGLYPDLTSMEKDFDLMIANCLAYNNRDTVFYR 654

Query: 116 QARSIHELAKKNFENLRQD 134
            A  + +     F   R++
Sbjct: 655 AAIKMRDQCGAIFRQARKE 673


>gi|393214028|gb|EJC99522.1| hypothetical protein FOMMEDRAFT_128149 [Fomitiporia mediterranea
           MF3/22]
          Length = 792

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 42/66 (63%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DP ++  Y +V++ PMDFGT+  K+  G Y +LEQF+ D  L+ SNA  +N P ++Y  
Sbjct: 80  VDPVQVAGYTDVVKSPMDFGTMTEKIEQGRYRSLEQFKDDFLLVTSNAKTFNPPPSLYHS 139

Query: 116 QARSIH 121
           +A  I 
Sbjct: 140 EASKIE 145


>gi|1245146|gb|AAB01099.1| HAT A1 [Tetrahymena thermophila]
          Length = 418

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 3/88 (3%)

Query: 56  MDP---EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTI 112
           +DP   +++PDY +VI  P+D   +  KL N  Y   +QF KDV  I +NA  YN PDTI
Sbjct: 309 LDPVNKDDVPDYYDVITDPIDIKAIEKKLQNNQYVDKDQFIKDVKRIFTNAKIYNQPDTI 368

Query: 113 YFRQARSIHELAKKNFENLRQDSDDNEP 140
           Y++ A+ + +  +     L+   + N P
Sbjct: 369 YYKAAKELEDFVEPYLTKLKDTKESNTP 396


>gi|118381444|ref|XP_001023869.1| histone acetyltransferase gcn5 [Tetrahymena thermophila]
 gi|89305650|gb|EAS03638.1| histone acetyltransferase gcn5 [Tetrahymena thermophila SB210]
          Length = 418

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 3/88 (3%)

Query: 56  MDP---EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTI 112
           +DP   +++PDY +VI  P+D   +  KL N  Y   +QF KDV  I +NA  YN PDTI
Sbjct: 309 LDPVNKDDVPDYYDVITDPIDIKAIEKKLQNNQYVDKDQFIKDVKRIFTNAKIYNQPDTI 368

Query: 113 YFRQARSIHELAKKNFENLRQDSDDNEP 140
           Y++ A+ + +  +     L+   + N P
Sbjct: 369 YYKAAKELEDFVEPYLTKLKDTKESNTP 396


>gi|440800738|gb|ELR21773.1| bromodomain domain containing protein [Acanthamoeba castellanii
           str. Neff]
          Length = 904

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 37/51 (72%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDT 111
           +P Y ++I+ PMDFGT+  KL NG Y  L QFE+DV L+ +NA+ +N PD+
Sbjct: 474 IPTYFDIIKEPMDFGTINQKLKNGKYEVLAQFERDVHLVFANALLFNEPDS 524


>gi|432956384|ref|XP_004085695.1| PREDICTED: bromodomain-containing protein 1-like, partial [Oryzias
           latipes]
          Length = 1000

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 42/62 (67%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T+R K+    Y +L++FE D  LI SN M YNA DT +++ A+
Sbjct: 588 KEVPDYLDHIKDPMDFSTMRRKIDTHGYRSLDEFEADFDLIISNCMTYNAKDTFFYKAAQ 647

Query: 119 SI 120
            +
Sbjct: 648 RM 649


>gi|367036160|ref|XP_003667362.1| hypothetical protein MYCTH_2313125 [Myceliophthora thermophila ATCC
           42464]
 gi|347014635|gb|AEO62117.1| hypothetical protein MYCTH_2313125 [Myceliophthora thermophila ATCC
           42464]
          Length = 957

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 2/86 (2%)

Query: 40  LYQIKSYCCSSSIDFKMDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           L + K Y  +++    +DP  L  PDY +VI+ PMD  T+ NKL+ G Y ++++FEKD  
Sbjct: 555 LRKTKHYDINAAFMQPVDPVALNIPDYHKVIKRPMDLQTMSNKLSAGEYQSIKEFEKDFD 614

Query: 98  LICSNAMQYNAPDTIYFRQARSIHEL 123
           LI  N   +N  D I + QA  + +L
Sbjct: 615 LIIKNCKTFNGEDHIVYAQALRLQDL 640


>gi|66800045|ref|XP_628948.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
 gi|74896738|sp|Q54BA2.1|Y3800_DICDI RecName: Full=Ankyrin repeat, bromo and BTB domain-containing
           protein DDB_G0293800
 gi|60462310|gb|EAL60533.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
          Length = 806

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 2/67 (2%)

Query: 56  MDP--EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
           +DP  E +PDY +VI+HPMD GT++ KL N  Y+T++ F  DV L+  NA+ YNA  +  
Sbjct: 545 VDPLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFAADVRLMFENALTYNADSSPV 604

Query: 114 FRQARSI 120
           ++ A+++
Sbjct: 605 WKHAKTL 611


>gi|350411600|ref|XP_003489398.1| PREDICTED: peregrin-like [Bombus impatiens]
          Length = 898

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 49/85 (57%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++ +E+PDY E++ HPMDF T++ K+    Y T+  FE D  L+ SN + YN  DT+++R
Sbjct: 552 VNTKEVPDYLEIVSHPMDFSTMQIKIERQEYDTIGAFEADFNLMVSNCLAYNRKDTMFYR 611

Query: 116 QARSIHELAKKNFENLRQDSDDNEP 140
               + E      +  R+D  + +P
Sbjct: 612 AGIKMKEQGGALIDQARKDYPELDP 636


>gi|403217920|emb|CCK72412.1| hypothetical protein KNAG_0K00440 [Kazachstania naganishii CBS
           8797]
          Length = 439

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 42/68 (61%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++ EE+PDY E I+ PMD  T+  KL N  Y  +E+F +DV L+C+N   YN  +T YF+
Sbjct: 356 VNKEEVPDYYEFIKEPMDLSTMEVKLENDKYEKMEEFIRDVHLVCNNCRLYNGENTSYFK 415

Query: 116 QARSIHEL 123
            A  + + 
Sbjct: 416 YANRLEKF 423


>gi|170578826|ref|XP_001894559.1| Bromodomain containing protein [Brugia malayi]
 gi|158598775|gb|EDP36597.1| Bromodomain containing protein [Brugia malayi]
          Length = 447

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 41/67 (61%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           PDY E+I+ PMDF T+R K+    Y  +  F+KD  LI  NAM YN+P T+Y+  A+ + 
Sbjct: 3   PDYHEIIKEPMDFATIRQKIDRDDYPDITTFKKDAELIVHNAMDYNSPGTVYYIAAQKMD 62

Query: 122 ELAKKNF 128
            + +  F
Sbjct: 63  LIVQFYF 69


>gi|212720948|ref|NP_998531.2| bromodomain-containing protein 7 [Danio rerio]
          Length = 628

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+ PMDF T++ K+    Y +LE+ + D  ++C NAM YN P+TIY++ A+ + 
Sbjct: 160 PGYSIIIKKPMDFSTIKEKVKKEQYQSLEELKLDFRVMCENAMIYNKPETIYYKAAKKLL 219

Query: 122 E-----LAKKNFENLRQ 133
                 L+K+  ++L+Q
Sbjct: 220 HSGMKILSKERLDSLKQ 236


>gi|125985419|ref|XP_001356473.1| GA20141 [Drosophila pseudoobscura pseudoobscura]
 gi|54644797|gb|EAL33537.1| GA20141 [Drosophila pseudoobscura pseudoobscura]
          Length = 868

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 43/68 (63%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P+Y  +I  PMDF T+R K+    Y+TL +F  D  L+C NA++YN  DT+Y + A+ + 
Sbjct: 312 PNYSSIISKPMDFSTMRQKIDGHEYSTLTEFSDDFKLMCDNAIKYNHVDTVYNKAAKKLL 371

Query: 122 ELAKKNFE 129
           ++  K+ +
Sbjct: 372 QVGMKHLQ 379


>gi|326918070|ref|XP_003205314.1| PREDICTED: ATPase family AAA domain-containing protein 2-like
            [Meleagris gallopavo]
          Length = 1293

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 15/175 (8%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP----DT 111
            +DPEE+PDY  VI+HPMD  TV +K+    Y T   F KD+ LICSNA++YN      D 
Sbjct: 910  VDPEEVPDYDTVIKHPMDLSTVLSKIDLHQYLTAGDFLKDIDLICSNALEYNPDKDPGDR 969

Query: 112  IYFRQARSIHELAKKNF-ENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSD 170
            +   +A S+ + A     E + +D +    E K  R+ R  T +   P     + +  S 
Sbjct: 970  LIRHRACSLKDTAHSIVKEEIDEDFEQLCEEIKESRKKRGCTSSKYAPDFYTVMPKENSA 1029

Query: 171  FSSDVTLASGAENTALTNRDLGNGTP----------HLEKSGFTDSSRRFSGSWN 215
                 T A  +E T +T   +   TP             KS F+ + RR +  +N
Sbjct: 1030 PECKKTDAKCSEKTKMTVTPVDASTPLSNDASKRKRRKTKSSFSIAKRRRTFQFN 1084


>gi|389637500|ref|XP_003716386.1| chromatin structure-remodeling complex protein rsc1 [Magnaporthe
           oryzae 70-15]
 gi|351642205|gb|EHA50067.1| chromatin structure-remodeling complex protein rsc1 [Magnaporthe
           oryzae 70-15]
          Length = 1052

 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 39/71 (54%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
            PDY EVI+ P+ F TVR K+    Y    +F +DV LIC NA  YN P  + F +A  +
Sbjct: 223 FPDYFEVIKEPVAFSTVRQKVLKKVYTAFSEFVRDVALICHNAQVYNRPSAVVFGEAVRL 282

Query: 121 HELAKKNFENL 131
            E+  K  E L
Sbjct: 283 REVFVKELERL 293


>gi|452820275|gb|EME27319.1| DNA-binding bromodomain-containing protein isoform 2 [Galdieria
           sulphuraria]
 gi|452820276|gb|EME27320.1| DNA-binding bromodomain-containing protein isoform 1 [Galdieria
           sulphuraria]
          Length = 416

 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 43/76 (56%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D   + DY  +++ PMD GTVR KL    Y  +E+  +D+ LI  N   YNAPDT ++ 
Sbjct: 52  VDTSVVTDYLTIVKKPMDLGTVREKLNRAQYTCVEELREDIDLIWDNCCLYNAPDTEFYL 111

Query: 116 QARSIHELAKKNFENL 131
            A  + E+  K FE L
Sbjct: 112 LAVKLREVTVKLFEQL 127


>gi|443894969|dbj|GAC72315.1| IRF-2-binding protein CELTIX-1 [Pseudozyma antarctica T-34]
          Length = 1207

 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 1/120 (0%)

Query: 19  FLVRIQQITTKGLSWNWDPQRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVR 78
           F   I+++ +KGL +   P+ +  ++           ++P+E+P Y +VI+ PMDFGT++
Sbjct: 199 FRRPIKRLRSKGL-YEAIPKLIENLQRRDSYKFFCEPVNPDEVPGYFDVIKTPMDFGTMQ 257

Query: 79  NKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDN 138
            K+ +  Y+ +++F+ D  L+ SNA  +N   T+Y  +A+ I     +  E      +DN
Sbjct: 258 RKVDDRLYSHMDEFKADFQLVISNAQTFNPEGTLYHNEAKRIATWGNRAIEREGMAVNDN 317


>gi|410899066|ref|XP_003963018.1| PREDICTED: bromodomain and PHD finger-containing protein 3-like
           [Takifugu rubripes]
          Length = 1207

 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D +E+PDY E I  PMDF T+++KL + AY ++   E D  L+ SN + YN  DTIY R
Sbjct: 603 VDVKEVPDYPEFISQPMDFSTMQSKLESHAYRSVADLECDFNLMISNCLLYNTKDTIYHR 662

Query: 116 QARSIHELA 124
            A  + EL 
Sbjct: 663 TALRLRELG 671


>gi|414588437|tpg|DAA39008.1| TPA: hypothetical protein ZEAMMB73_513409 [Zea mays]
          Length = 577

 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY +VI  PMD GT++NKL    Y ++E+F  DV L  SNAM+YN P       A+ +
Sbjct: 92  IPDYFDVIRSPMDLGTIKNKLTKKKYVSIEEFAADVRLTFSNAMKYNPPGNDVHIFAKEL 151

Query: 121 HELAKKNFENLRQ 133
           +E+    +E++ +
Sbjct: 152 NEMFDSEWESVER 164


>gi|195147328|ref|XP_002014632.1| GL19286 [Drosophila persimilis]
 gi|194106585|gb|EDW28628.1| GL19286 [Drosophila persimilis]
          Length = 803

 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 43/68 (63%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P+Y  +I  PMDF T+R K+    Y+TL +F  D  L+C NA++YN  DT+Y + A+ + 
Sbjct: 247 PNYSSIISKPMDFSTMRQKIDGHEYSTLTEFSDDFKLMCDNAIKYNHVDTVYNKAAKKLL 306

Query: 122 ELAKKNFE 129
           ++  K+ +
Sbjct: 307 QVGMKHLQ 314


>gi|440467216|gb|ELQ36453.1| chromatin structure-remodeling complex protein rsc1 [Magnaporthe
           oryzae Y34]
 gi|440479713|gb|ELQ60462.1| chromatin structure-remodeling complex protein rsc1 [Magnaporthe
           oryzae P131]
          Length = 1011

 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 39/71 (54%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
            PDY EVI+ P+ F TVR K+    Y    +F +DV LIC NA  YN P  + F +A  +
Sbjct: 182 FPDYFEVIKEPVAFSTVRQKVLKKVYTAFSEFVRDVALICHNAQVYNRPSAVVFGEAVRL 241

Query: 121 HELAKKNFENL 131
            E+  K  E L
Sbjct: 242 REVFVKELERL 252


>gi|383854062|ref|XP_003702541.1| PREDICTED: peregrin-like [Megachile rotundata]
          Length = 896

 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 48/85 (56%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++ +E+PDY E++ HPMD  T++ KL    Y T+  FE D  L+ +N + YN  DT+++R
Sbjct: 551 VNTKEVPDYLEIVSHPMDLSTMQAKLERQEYDTIGAFEADFNLMVNNCLAYNRKDTMFYR 610

Query: 116 QARSIHELAKKNFENLRQDSDDNEP 140
               + E      E  R+D  + +P
Sbjct: 611 AGTKMKEQGGALIEQARKDYPELDP 635


>gi|307192025|gb|EFN75409.1| Peregrin [Harpegnathos saltator]
          Length = 891

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 47/82 (57%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY E++ HPMD  T++ KL    Y ++  FE D  L+ SN ++YN  DT+++R   
Sbjct: 553 KEVPDYLEIVSHPMDLSTMQVKLERQEYDSIGAFEADFNLMVSNCLEYNRKDTMFYRAGV 612

Query: 119 SIHELAKKNFENLRQDSDDNEP 140
            + E      E  R++  D +P
Sbjct: 613 KMREQGGALIEQARKEYPDLDP 634


>gi|350646697|emb|CCD58611.1| bromodomain containing, putative [Schistosoma mansoni]
          Length = 1184

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)

Query: 64  YCEVIEHPMDFGTVRNKLANGAYA-TLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           Y EVI  PMD GT+ N+L + AY  +  ++  DV L+C+NAM YN PDTIY+++AR
Sbjct: 121 YSEVISKPMDLGTIYNRLKSRAYYRSATEYLADVTLMCNNAMVYNPPDTIYYQRAR 176


>gi|256087076|ref|XP_002579704.1| bromodomain containing [Schistosoma mansoni]
          Length = 1184

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)

Query: 64  YCEVIEHPMDFGTVRNKLANGAYA-TLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           Y EVI  PMD GT+ N+L + AY  +  ++  DV L+C+NAM YN PDTIY+++AR
Sbjct: 121 YSEVISKPMDLGTIYNRLKSRAYYRSATEYLADVTLMCNNAMVYNPPDTIYYQRAR 176


>gi|336369193|gb|EGN97535.1| hypothetical protein SERLA73DRAFT_56919 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 531

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 42/66 (63%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DP ++P Y +VI+ PMD GT+  K+++  Y +LE+F  D  L+ SNA  +N P TIY  
Sbjct: 101 VDPAQIPGYADVIKRPMDLGTMSAKVSHSRYRSLEEFAADFRLVTSNAKTFNPPGTIYHS 160

Query: 116 QARSIH 121
           +A  I 
Sbjct: 161 EADRIE 166


>gi|164427045|ref|XP_959775.2| hypothetical protein NCU02354 [Neurospora crassa OR74A]
 gi|157071582|gb|EAA30539.2| predicted protein [Neurospora crassa OR74A]
          Length = 1286

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 4/112 (3%)

Query: 41  YQIK----SYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDV 96
           Y IK     Y  +S     ++   LPDY EVI+ PM F T+R KL   +Y +  +F +DV
Sbjct: 222 YTIKVDGEDYEIASGFQRLVNKRSLPDYFEVIKTPMAFSTIRGKLGKKSYTSFNEFVQDV 281

Query: 97  FLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRG 148
             IC NA  YN P    F  A  + E+ K     L +  D  E + ++   G
Sbjct: 282 TRICHNAQVYNRPSAPIFSDAGRLLEVFKGKLAELVRKGDITEKDAEIPDYG 333


>gi|449329888|gb|AGE96156.1| transcriptional activator [Encephalitozoon cuniculi]
          Length = 396

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 44/78 (56%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DP E+PDY + I  PMD  T+  KL N  Y  +E F  DV L+ +N  +YN  DT Y++
Sbjct: 307 VDPAEVPDYYKCIAKPMDLSTMVLKLRNNEYGCIEAFVADVHLMVNNCFEYNGRDTQYYK 366

Query: 116 QARSIHELAKKNFENLRQ 133
            AR++ +   K  E  R 
Sbjct: 367 CARALLDHFNKKLEFYRH 384


>gi|409074449|gb|EKM74847.1| hypothetical protein AGABI1DRAFT_132819 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 886

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +P Y +VI+ PMDF T+ NK+  G Y +LE+F  D+ L+ +NA  +N P TIY+ +A  I
Sbjct: 131 VPGYLDVIKCPMDFATMSNKVNRGKYRSLEEFANDLKLVTTNAKTFNPPGTIYYTEAERI 190

Query: 121 HELA 124
              A
Sbjct: 191 EAWA 194


>gi|426192838|gb|EKV42773.1| hypothetical protein AGABI2DRAFT_122354 [Agaricus bisporus var.
           bisporus H97]
          Length = 880

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +P Y +VI+ PMDF T+ NK+  G Y +LE+F  D+ L+ +NA  +N P TIY+ +A  I
Sbjct: 105 VPGYLDVIKCPMDFATMTNKVNRGKYRSLEEFANDLKLVTTNAKTFNPPGTIYYTEAERI 164

Query: 121 HELA 124
              A
Sbjct: 165 EAWA 168


>gi|395513633|ref|XP_003761027.1| PREDICTED: bromodomain-containing protein 4 [Sarcophilus harrisii]
          Length = 1379

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 410 DYCDIIKHPMDLSTIKSKLETREYRDAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQD 469

Query: 123 LAKKNFENLRQDSDDNEPETKVVR----RGRPPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 470 VFEMRFAKM-----PDEPEEPVVAVSSPVAPPPTKVVAPP 504



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 33/63 (52%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y    +  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAHECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|89272115|emb|CAJ82177.1| bromodomain containing 7 [Xenopus (Silurana) tropicalis]
          Length = 641

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 41/59 (69%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I++PMDF T++ K+ N  Y ++E+F+++   IC NAM YN P TIY+R A+ +
Sbjct: 173 PGYSLIIKNPMDFSTMKEKIRNCQYRSIEEFKENFKQICHNAMIYNKPGTIYYRAAKKL 231


>gi|56118438|ref|NP_001008008.1| bromodomain-containing protein 7 [Xenopus (Silurana) tropicalis]
 gi|51703355|gb|AAH80886.1| brd7 protein [Xenopus (Silurana) tropicalis]
          Length = 641

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 41/59 (69%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I++PMDF T++ K+ N  Y ++E+F+++   IC NAM YN P TIY+R A+ +
Sbjct: 173 PGYSLIIKNPMDFSTMKEKIRNCQYRSIEEFKENFKQICHNAMIYNKPGTIYYRAAKKL 231


>gi|388857302|emb|CCF49144.1| related to Peregrin (Bromodomain and PHD finger-containing protein
           1) [Ustilago hordei]
          Length = 1261

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 47/72 (65%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           ++PDY ++++ PMD+  +++K+AN  Y ++E+  +DV  I +NAM YN  DT Y + A  
Sbjct: 570 DVPDYYDIVKEPMDWSAIKDKIANKVYDSVEEMRQDVLKIATNAMTYNKADTPYHKAATK 629

Query: 120 IHELAKKNFENL 131
           + ++    F++L
Sbjct: 630 VLKMIPDLFKHL 641


>gi|410076588|ref|XP_003955876.1| hypothetical protein KAFR_0B04450 [Kazachstania africana CBS 2517]
 gi|372462459|emb|CCF56741.1| hypothetical protein KAFR_0B04450 [Kazachstania africana CBS 2517]
          Length = 456

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 40/65 (61%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           EE+PDY + I+ PMD  T+  KL N  Y  +E+F +DV LICSN   YN  +T YF+ A 
Sbjct: 376 EEVPDYYDFIKEPMDLSTMEIKLENNKYQKMEEFIRDVKLICSNCRLYNGENTSYFKYAN 435

Query: 119 SIHEL 123
            + + 
Sbjct: 436 RLEKF 440


>gi|312078561|ref|XP_003141792.1| hypothetical protein LOAG_06208 [Loa loa]
 gi|307763044|gb|EFO22278.1| hypothetical protein LOAG_06208 [Loa loa]
          Length = 614

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 40/67 (59%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           PDY E+I+ PMDF T+R K+    Y  +  F+KD  LI  NAM YN+P TIY   A+ + 
Sbjct: 191 PDYHEIIKEPMDFATIRQKIDRDEYPDIATFKKDAELIVHNAMDYNSPGTIYHIAAQKMD 250

Query: 122 ELAKKNF 128
            + +  F
Sbjct: 251 LVVQFYF 257


>gi|27804346|gb|AAO22237.1| BRD4-NUT fusion oncoprotein [Homo sapiens]
          Length = 1846

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 387 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 446

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 447 QDVFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 46.6 bits (109), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    L  +    E E  +V+   RGR
Sbjct: 154 EKLFLQKINELPTE----ETEIMIVQAKGRGR 181


>gi|195051867|ref|XP_001993187.1| GH13677 [Drosophila grimshawi]
 gi|193900246|gb|EDV99112.1| GH13677 [Drosophila grimshawi]
          Length = 903

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 2/72 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I  PMDF T+R K+ +  YA L +F  D  L+C NA++YN  DT+Y + A+ + 
Sbjct: 341 PGYSSIISKPMDFSTMRQKIDDHEYAALSEFSDDFRLMCENAIRYNHVDTVYHKAAKRLL 400

Query: 122 ELAKKNF--ENL 131
           ++  K    ENL
Sbjct: 401 QMGLKQLQPENL 412


>gi|339245937|ref|XP_003374602.1| putative bromodomain protein [Trichinella spiralis]
 gi|316972199|gb|EFV55887.1| putative bromodomain protein [Trichinella spiralis]
          Length = 847

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 43/74 (58%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY +VIE PMD GTVR KL    Y +  +F  DV LI SN  +YN PD    + A++I
Sbjct: 403 LHDYYDVIEVPMDLGTVRRKLECREYGSPSEFAADVRLIFSNCYRYNPPDHEVVKMAKTI 462

Query: 121 HELAKKNFENLRQD 134
            E+ ++ F  L  D
Sbjct: 463 SEIFEQRFAQLPDD 476



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           L DY ++I+ PMD GT+  +L N  Y + +Q  +D   + +N   YN P  D +   QA
Sbjct: 133 LVDYHDIIKRPMDLGTIEKRLRNCYYYSSQQSMQDFMTMFTNCYTYNPPGSDIVVMAQA 191


>gi|66513632|ref|XP_395348.2| PREDICTED: peregrin-like [Apis mellifera]
          Length = 895

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 24/188 (12%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++ +E+PDY E++ HPMD  T++ K+    Y T+  FE D  L+ +N + YN  DT+++R
Sbjct: 550 VNTKEVPDYLEIVSHPMDLSTMQTKIERQEYDTIGAFEADFNLMVNNCLAYNRKDTMFYR 609

Query: 116 QARSIHELAKKNFENLRQDSDDNEP--ETKVVRRGRPPTKNFKKPLGRPSLERARSDFSS 173
               + E      E  R+D  + +P    + V + R   +N           R+R     
Sbjct: 610 AGIKMKEQGGILIEQARKDYPELDPGENEQTVSKSRKRDRN----------NRSR----G 655

Query: 174 DVTLASGAENTALTNRDLGNGTPHLEKSGFTDSSRRFSGSWNDLYTGCLAENKLERNDEV 233
           ++ L SG +         G G        FT  +R  +   N ++T  L ++K +++D  
Sbjct: 656 EIELQSGEKEIG------GGGVNRRTAVLFTRKARARASRSNQMFT--LEDDKKKQSDSF 707

Query: 234 SLSKGYSM 241
            + +  +M
Sbjct: 708 KIYRSGTM 715


>gi|328875742|gb|EGG24106.1| bromodomain-containing protein [Dictyostelium fasciculatum]
          Length = 1139

 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 38/59 (64%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P+Y   I+ PM F  ++N +  G Y ++EQF  D  LIC N M+YN PD+ YF++A+ I
Sbjct: 276 PNYFTHIKEPMAFEVMKNGIKAGKYKSVEQFLYDFSLICENCMKYNQPDSFYFKEAKRI 334


>gi|343427780|emb|CBQ71306.1| related to Peregrin (Bromodomain and PHD finger-containing protein
           1) [Sporisorium reilianum SRZ2]
          Length = 1220

 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 3/77 (3%)

Query: 55  KMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF 114
           KMD   +PDY ++++ PMD+ T+++K+ N  Y ++E   +DV  I +NAM YN  DT Y 
Sbjct: 571 KMD---VPDYYDIVKEPMDWATIKDKITNKTYDSVEDMRQDVLKIAANAMTYNKADTPYH 627

Query: 115 RQARSIHELAKKNFENL 131
           + A  I  +    F+ L
Sbjct: 628 KAASKILRMIPDVFKEL 644


>gi|47206036|emb|CAF91716.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 716

 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 43/68 (63%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D +E+PDY E I  PMDF T+++KL + AY ++   E D  L+ SN + YN  DT+Y R
Sbjct: 608 VDIKEVPDYAEFISQPMDFSTMQSKLESHAYRSVGDLEDDFNLMISNCLLYNTKDTVYHR 667

Query: 116 QARSIHEL 123
            A  + EL
Sbjct: 668 TALRLREL 675


>gi|345492655|ref|XP_003426902.1| PREDICTED: bromodomain-containing protein 7-like isoform 2 [Nasonia
           vitripennis]
          Length = 733

 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 40/65 (61%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y ++I +PMDF T++ K+ +  Y  + +F  D  L+C NA  YN PDTIY++ A+ + 
Sbjct: 156 PGYSQIITNPMDFSTIKQKIDDNNYQNISEFVSDFKLMCDNATTYNHPDTIYYKAAKKLL 215

Query: 122 ELAKK 126
            +  K
Sbjct: 216 HVGLK 220


>gi|353243946|emb|CCA75421.1| related to BDF1-Sporulation protein [Piriformospora indica DSM
           11827]
          Length = 534

 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 18/90 (20%)

Query: 36  DPQRLYQIKSYCCSSSIDF---------------KMDPEELPDYCEVIEHPMDFGTVRNK 80
           DP R+ Q+K   C +++D                 +D  E P+Y EVI++PMD GT+R+K
Sbjct: 289 DPLRIAQVK--FCKTALDHLYRKEYETWVFPFLRPVDLSEFPNYLEVIKNPMDLGTIRDK 346

Query: 81  LANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           L++  Y T E+F KDV L+ +N   YN PD
Sbjct: 347 LSHAVYGTAEEFHKDVKLMFTNCYTYN-PD 375



 Score = 45.4 bits (106), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 2/49 (4%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANG--AYATLEQFEKDVFLICSNAMQYN 107
           +P Y +VI+ PMD GT+++KL     AY TL+ F  DV L+  N  ++N
Sbjct: 163 IPTYFDVIKQPMDLGTIQSKLMASPCAYDTLQSFVNDVDLVFDNCYRFN 211


>gi|164660354|ref|XP_001731300.1| hypothetical protein MGL_1483 [Malassezia globosa CBS 7966]
 gi|159105200|gb|EDP44086.1| hypothetical protein MGL_1483 [Malassezia globosa CBS 7966]
          Length = 748

 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 40/65 (61%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++ +E+P Y EVI HPMD GT+  ++  G Y  ++ F+ D  L+  NA ++N P +IY  
Sbjct: 74  VNADEVPGYREVITHPMDLGTMEKRIHEGYYTNMDMFQHDFMLVTQNAQRFNPPSSIYHS 133

Query: 116 QARSI 120
            AR +
Sbjct: 134 AARRL 138


>gi|33416407|gb|AAH55611.1| Bromodomain containing 7 [Danio rerio]
 gi|182890722|gb|AAI65203.1| Brd7 protein [Danio rerio]
          Length = 599

 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I+ PMDF T++ K+    Y +LE+ + D  ++C NAM YN P+TIY++ A+ + 
Sbjct: 160 PGYSIIIKKPMDFSTIKEKVKKEQYQSLEELKLDFRVMCENAMIYNKPETIYYKAAKKLL 219

Query: 122 E-----LAKKNFENLRQ 133
                 L+K+  ++L+Q
Sbjct: 220 HSGMKILSKERLDSLKQ 236


>gi|156542415|ref|XP_001601263.1| PREDICTED: bromodomain-containing protein 7-like isoform 1 [Nasonia
           vitripennis]
          Length = 787

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 40/65 (61%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y ++I +PMDF T++ K+ +  Y  + +F  D  L+C NA  YN PDTIY++ A+ + 
Sbjct: 210 PGYSQIITNPMDFSTIKQKIDDNNYQNISEFVSDFKLMCDNATTYNHPDTIYYKAAKKLL 269

Query: 122 ELAKK 126
            +  K
Sbjct: 270 HVGLK 274


>gi|348500304|ref|XP_003437713.1| PREDICTED: bromodomain-containing protein 7-like [Oreochromis
           niloticus]
          Length = 614

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 5/80 (6%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  VI+ PMDF T+++K+    Y +L++ + D  ++C NAM YN P+TIY + AR + 
Sbjct: 149 PGYSAVIKRPMDFSTMKDKVKKECYQSLDELKVDFRIMCENAMIYNKPETIYHKAARKLL 208

Query: 122 E-----LAKKNFENLRQDSD 136
                 L+++  ++L+Q  D
Sbjct: 209 HSGMKILSQERLDSLKQSID 228


>gi|443897855|dbj|GAC75194.1| chromatin remodeling complex SWI/SNF, component SWI2 [Pseudozyma
           antarctica T-34]
          Length = 1017

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 19/142 (13%)

Query: 15  ERRLFLVRIQQITTKGLSWNWDPQRLYQ-----IKSYCCSSSIDFKM---DPEELPDYCE 66
           ER++  + + Q+T  G       QRL       I     +   DF +   D +E PDY E
Sbjct: 63  ERKIHSLSLDQLTQSG-------QRLMDTVMDAIDPTDGAPLHDFFLELPDADEYPDYYE 115

Query: 67  VIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKK 126
           +I+ P+    +++KL   AYATL   + D   IC+NA +YN  DT  + +AR +H L K 
Sbjct: 116 IIKRPLALDAIQHKLDQRAYATLPDIKHDFETICNNAKRYNLRDTPVWLKARDLHSLIKI 175

Query: 127 NF----ENLRQDSDDNEPETKV 144
            +    E+L + S    P T +
Sbjct: 176 TYVQIVESLPEPSAAAPPSTTM 197


>gi|432857915|ref|XP_004068789.1| PREDICTED: bromodomain and PHD finger-containing protein 3-like
           [Oryzias latipes]
          Length = 1229

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 40/65 (61%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY E I  PMD  T+R KL   AY ++   EKD  L+ SN ++YN+ DT++ + A  
Sbjct: 638 EVPDYLEFISQPMDLSTMRTKLEGHAYCSVADLEKDFNLMISNCLKYNSKDTMFHKTALQ 697

Query: 120 IHELA 124
           + E+ 
Sbjct: 698 LQEVG 702


>gi|358255016|dbj|GAA56703.1| bromodomain-containing protein 9 [Clonorchis sinensis]
          Length = 1503

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 64  YCEVIEHPMDFGTVRNKLANGAYA-TLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           Y + I HPMD GT+  +L + AY  +   +  DV L+C NAM YNAP+T+YF +AR +  
Sbjct: 105 YSQTISHPMDLGTIYTRLQSRAYYRSATDYLADVTLMCDNAMVYNAPNTVYFERARKLLL 164

Query: 123 LAKK 126
             +K
Sbjct: 165 FCRK 168


>gi|324502755|gb|ADY41210.1| Bromodomain-containing protein 7 [Ascaris suum]
          Length = 633

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 10/82 (12%)

Query: 57  DPEEL----------PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQY 106
           DPEE           PDY +VI+ PMDF T+R+K+    Y  +  F KDV L+ +NA+ Y
Sbjct: 183 DPEEYFAFPVTQSMAPDYHQVIKEPMDFSTMRSKIEANEYEDVAAFRKDVELVVNNALTY 242

Query: 107 NAPDTIYFRQARSIHELAKKNF 128
           N P+TIY   A+ + ++ +  F
Sbjct: 243 NQPNTIYNVAAQKLDQIVRFYF 264


>gi|152149104|pdb|2I7K|A Chain A, Solution Structure Of The Bromodomain Of Human Brd7
           Protein
          Length = 117

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/83 (34%), Positives = 51/83 (61%)

Query: 38  QRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           Q + Q++    S+   F +     P Y  +I+HPMDF T++ K+ N  Y ++E+ + +  
Sbjct: 15  QLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFK 74

Query: 98  LICSNAMQYNAPDTIYFRQARSI 120
           L+C+NAM YN P+TIY++ A+ +
Sbjct: 75  LMCTNAMIYNKPETIYYKAAKKL 97


>gi|91085319|ref|XP_969635.1| PREDICTED: similar to CG7154 CG7154-PA [Tribolium castaneum]
 gi|270008429|gb|EFA04877.1| hypothetical protein TcasGA2_TC014936 [Tribolium castaneum]
          Length = 659

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 13/113 (11%)

Query: 8   AVLTVKRERRLFLVRIQQITTKGLSWNWDPQRLYQIKSYCCSSSIDFKMDPEELPDYCEV 67
            VL  ++ER      + Q+   GL    DPQ+ +   ++  + +I         P Y  +
Sbjct: 139 CVLRQRQERTPVQRMLDQLL--GLLEKKDPQQFF---AWPVTDNI--------APGYSSI 185

Query: 68  IEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           I  PMDF T+R K+ +  Y  L+ F  D  L+C+NAM+YN  DTIY++ ++ +
Sbjct: 186 ITQPMDFSTMRQKIEDNQYDNLQDFNADFKLMCTNAMKYNHVDTIYYKASKKL 238


>gi|50400639|sp|Q9ESU6.1|BRD4_MOUSE RecName: Full=Bromodomain-containing protein 4; AltName:
           Full=Mitotic chromosome-associated protein; Short=MCAP
 gi|9931486|gb|AAG02191.1|AF273217_1 cell proliferation related protein CAP [Mus musculus]
          Length = 1400

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 390 DYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 449

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 450 VFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAPP 484



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|226342873|ref|NP_065254.3| bromodomain-containing protein 4 isoform 1 [Mus musculus]
 gi|148708379|gb|EDL40326.1| bromodomain containing 4, isoform CRA_a [Mus musculus]
 gi|148708382|gb|EDL40329.1| bromodomain containing 4, isoform CRA_a [Mus musculus]
          Length = 1400

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 390 DYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 449

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 450 VFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAPP 484



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|18308125|gb|AAL67833.1|AF461395_1 bromodomain-containing protein BRD4 long variant [Mus musculus]
          Length = 1400

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 390 DYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 449

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 450 VFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAPP 484



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|74184776|dbj|BAE27987.1| unnamed protein product [Mus musculus]
          Length = 1401

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 391 DYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 450

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 451 VFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAPP 485



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|432868098|ref|XP_004071410.1| PREDICTED: uncharacterized protein LOC101158947 [Oryzias latipes]
          Length = 1443

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 5/99 (5%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY ++I+HPMD  T++ KL N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 390 LHDYHDIIKHPMDLSTIKAKLENRQYRDPQEFAADVRLMFSNCYKYNPPDHEVVAMARKL 449

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPL 159
            ++ +  F  +      +EPE+K V    PP+ +   P+
Sbjct: 450 QDVFEMRFAKM-----PDEPESKHVVSVPPPSLHHPAPV 483



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           LPDY  +I  PMD GT++ +L N  Y   ++  +D   + +N   YN P  D +   +A
Sbjct: 73  LPDYYTIIHTPMDLGTIKKRLENSYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEA 131


>gi|328865269|gb|EGG13655.1| bromodomain-containing protein [Dictyostelium fasciculatum]
          Length = 1155

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 44/70 (62%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DY +V++HPMDFGT+RN L +G Y  +E+F  D  L+ SNA  YN P+      A ++ +
Sbjct: 485 DYFDVVKHPMDFGTIRNLLLSGVYQEMEEFAIDCRLVFSNAKDYNPPNNPVHIMAITLED 544

Query: 123 LAKKNFENLR 132
           + ++ +  L+
Sbjct: 545 IFERKYSKLQ 554


>gi|154315443|ref|XP_001557044.1| hypothetical protein BC1G_04294 [Botryotinia fuckeliana B05.10]
          Length = 372

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D + + DYC VI HPMD  T++ KL  G Y T + F +DV LI  N  QYN P+TI+ R
Sbjct: 290 VDVKLVEDYCTVIAHPMDLQTMQQKLDQGLYDTPKDFVEDVKLIIKNCRQYNKPNTIFCR 349

Query: 116 QARSIHELAKKNF 128
               + E A K+F
Sbjct: 350 HVTKL-EKAMKDF 361


>gi|213512228|ref|NP_001094373.1| bromodomain containing 4 [Rattus norvegicus]
          Length = 1403

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 390 DYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 449

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 450 VFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAPP 484



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|358335558|dbj|GAA39857.2| SWI/SNF-related matrix-associated actin-dependent regulator of
            chromatin subfamily A member 2/4 [Clonorchis sinensis]
          Length = 1715

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 5/83 (6%)

Query: 59   EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA- 117
            +ELPDY EVI+ PMDF  ++ ++ +G Y ++++ E DV L+C NA  YN   ++ F  + 
Sbjct: 1421 KELPDYYEVIKKPMDFHRIKQRVRDGKYRSVDELEADVMLLCKNAQTYNMDGSLIFEDSV 1480

Query: 118  --RSIHELAKKNFENL--RQDSD 136
              +S+   A++  E L  RQ S+
Sbjct: 1481 VLQSVWTNARERLEELESRQQSE 1503


>gi|268529530|ref|XP_002629891.1| C. briggsae CBR-TAG-298 protein [Caenorhabditis briggsae]
          Length = 626

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 42/70 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           E  PDY E+I+ PMD  T+R K+ +G Y +L   + D  LI SNA+QYN P T+++  A+
Sbjct: 174 EMAPDYREIIQTPMDLQTIREKIEDGLYPSLPAMKGDCDLIVSNALQYNQPTTVFYLAAK 233

Query: 119 SIHELAKKNF 128
            +  L    F
Sbjct: 234 RLANLINYYF 243


>gi|313232668|emb|CBY19338.1| unnamed protein product [Oikopleura dioica]
          Length = 814

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 2/86 (2%)

Query: 41  YQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLIC 100
           YQ  SY     +D+K    +LPDY ++I HPMD GTVR KL +G Y+   + +KD+ L+ 
Sbjct: 238 YQSVSYLFYEPVDYKK--LKLPDYPKIITHPMDMGTVRQKLVDGKYSDPMEVQKDMELMF 295

Query: 101 SNAMQYNAPDTIYFRQARSIHELAKK 126
            N  +YN P     + A+ +  +  K
Sbjct: 296 HNCYRYNPPSNSVVKAAKKLDTIFHK 321



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
           LPDY EV++ PMD  T++ K     Y +  +   D  ++ SN   YN P
Sbjct: 48  LPDYYEVVKKPMDLSTIKKKFDTYQYNSGAEALSDFEVMFSNCYLYNKP 96


>gi|149034725|gb|EDL89462.1| bromodomain containing 4, isoform CRA_a [Rattus norvegicus]
          Length = 915

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 388 LHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 447

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 448 QDVFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAPP 484



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    L  +    E E  +V+   RGR
Sbjct: 154 EKLFLQKINELPTE----ETEIMIVQAKGRGR 181


>gi|195471427|ref|XP_002088006.1| GE14624 [Drosophila yakuba]
 gi|194174107|gb|EDW87718.1| GE14624 [Drosophila yakuba]
          Length = 861

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 2/72 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I  PMDF T+R K+ +  YA L +F  D  L+C NA++YN  DT+Y + A+ + 
Sbjct: 310 PGYSSIISRPMDFSTMRQKIDDHEYAALTEFTDDFKLMCDNAIKYNHVDTVYNKAAKRLL 369

Query: 122 ELAKKNF--ENL 131
           ++  K+   ENL
Sbjct: 370 QVGMKHLQPENL 381


>gi|432847788|ref|XP_004066150.1| PREDICTED: uncharacterized protein LOC101159647 [Oryzias latipes]
          Length = 1469

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 16/134 (11%)

Query: 10  LTVKRERRL-FLVRI--QQITTKGLSWNWDPQRLYQIKSYCCSSSIDFKMDPEELPDYCE 66
           +T KR+ +L F  R+  + ++ K +++ W     Y+         +D K     L DY +
Sbjct: 426 VTSKRQEQLRFCARLLKEMLSKKHVAYAWP---FYK--------PVDAKA--LGLHDYHD 472

Query: 67  VIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKK 126
           +I+HPMD  T++ KL N  Y   ++F  DV L+ SN  +YN PD      AR + ++ + 
Sbjct: 473 IIKHPMDLSTIKKKLDNRQYRDAQEFAADVRLMFSNCYKYNPPDHDVVSMARKLQDVFEM 532

Query: 127 NFENLRQDSDDNEP 140
            F  +  D +++ P
Sbjct: 533 RFAKMPDDPEESTP 546



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 73  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 132

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR 149
            +L  +    + Q+    E E  V+ +GR
Sbjct: 133 EKLFLQKITEMPQE----ETEISVLTKGR 157


>gi|71681018|gb|AAI00642.1| Brd4 protein, partial [Rattus norvegicus]
          Length = 566

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 388 LHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 447

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 448 QDVFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAPP 484



 Score = 45.4 bits (106), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    L  +    E E  +V+   RGR
Sbjct: 154 EKLFLQKINELPTE----ETEIMIVQAKGRGR 181


>gi|367055828|ref|XP_003658292.1| hypothetical protein THITE_2124850 [Thielavia terrestris NRRL 8126]
 gi|347005558|gb|AEO71956.1| hypothetical protein THITE_2124850 [Thielavia terrestris NRRL 8126]
          Length = 884

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +P Y +VI+ PMD GT+ NKLA+G Y + ++FEKD  LI  N   +N  D I + QA  +
Sbjct: 501 IPQYHKVIKKPMDLGTMANKLASGEYTSSKEFEKDFDLIIKNCRTFNGEDHIVYNQALKL 560

Query: 121 HEL 123
            +L
Sbjct: 561 QDL 563


>gi|301624296|ref|XP_002941445.1| PREDICTED: ATPase family AAA domain-containing protein 2-like
            [Xenopus (Silurana) tropicalis]
          Length = 1366

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DPEE+PDY  VI  PMD  TV +K+    Y T++++ KD+ LICSNA++YN PD
Sbjct: 1008 VDPEEVPDYVTVIAQPMDLSTVISKIDLHKYHTVKEYLKDIDLICSNALEYN-PD 1061


>gi|74354344|gb|AAI03774.1| Brd4 protein, partial [Mus musculus]
          Length = 557

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 388 LHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 447

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 448 QDVFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAPP 484



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    L  +    E E  +V+   RGR
Sbjct: 154 EKLFLQKINELPTE----ETEIMIVQAKGRGR 181


>gi|74181884|dbj|BAE32643.1| unnamed protein product [Mus musculus]
          Length = 545

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 388 LHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 447

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 448 QDVFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAPP 484



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    L  +    E E  +V+   RGR
Sbjct: 154 EKLFLQKINELPTE----ETEIMIVQAKGRGR 181


>gi|389747275|gb|EIM88454.1| hypothetical protein STEHIDRAFT_167739 [Stereum hirsutum FP-91666
           SS1]
          Length = 1140

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           + P E PDY +++  PMD  T++ ++  GA     +F++DV+L+ +N+M YN PD+    
Sbjct: 504 IKPSEAPDYQDIVLRPMDLKTIKTRIKEGAITNSLEFQRDVYLMFANSMMYNRPDS---- 559

Query: 116 QARSIHELAKKNFENLRQDSDDN 138
               I+ +A++ F  L QD D +
Sbjct: 560 ---DIYTMAEEFFSLLSQDEDQS 579


>gi|432942400|ref|XP_004083000.1| PREDICTED: bromodomain-containing protein 1-like [Oryzias latipes]
          Length = 1237

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 47/79 (59%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY + I++PMDF T+R ++    Y  L+QFE D  LI +N ++YN+ DT ++R
Sbjct: 603 VDVSEVPDYLDHIKNPMDFSTMRQRVDAQCYNNLDQFEADFNLIVNNCLKYNSKDTYFYR 662

Query: 116 QARSIHELAKKNFENLRQD 134
            A  + +         R+D
Sbjct: 663 AAVRLRDQGGVLLRKARRD 681


>gi|119584376|gb|EAW63972.1| bromodomain and PHD finger containing, 1, isoform CRA_a [Homo
           sapiens]
          Length = 514

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 42/68 (61%)

Query: 55  KMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF 114
           K+  E +PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++
Sbjct: 202 KLKRETVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFY 261

Query: 115 RQARSIHE 122
           R A  + E
Sbjct: 262 RAAVRLRE 269


>gi|52350614|gb|AAH82782.1| Brd4 protein, partial [Mus musculus]
          Length = 582

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 388 LHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 447

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 448 QDVFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAPP 484



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    L  +    E E  +V+   RGR
Sbjct: 154 EKLFLQKINELPTE----ETEIMIVQAKGRGR 181


>gi|313231514|emb|CBY08628.1| unnamed protein product [Oikopleura dioica]
          Length = 1239

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 38/52 (73%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYN 107
           +DPEELPDY EVI+HPMD  T+  K+    Y T+++F  DV L+ SNA++YN
Sbjct: 793 VDPEELPDYHEVIKHPMDLATMMCKIDAHEYQTVKEFLADVKLMSSNALEYN 844


>gi|294886857|ref|XP_002771888.1| bromodomain containing protein [Perkinsus marinus ATCC 50983]
 gi|239875688|gb|EER03704.1| bromodomain containing protein [Perkinsus marinus ATCC 50983]
          Length = 553

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 14/106 (13%)

Query: 38  QRLYQIKSY--CCSSSID------------FKMDPEELPDYCEVIEHPMDFGTVRNKLAN 83
           QR ++ KSY   CS  +             F +D  E+P Y ++I++PM F  +  + + 
Sbjct: 47  QRQWRQKSYRDLCSVVLRWMRSKDRNQFFYFPVDVNEVPTYRDIIKNPMSFDLMEARASK 106

Query: 84  GAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFE 129
            AY TL+  +KD  LIC NAM++N   +I++R A  +    +K F+
Sbjct: 107 KAYKTLDDVQKDFKLICENAMKFNPEGSIWYRAAEKLQGDGEKQFD 152


>gi|241604623|ref|XP_002405922.1| bromodomain-containing protein 2, brd2, putative [Ixodes
           scapularis]
 gi|215502589|gb|EEC12083.1| bromodomain-containing protein 2, brd2, putative [Ixodes
           scapularis]
          Length = 885

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+HPMD GTV+ K+ N  Y + E+F  DV LI +N  +YN PD      AR +
Sbjct: 430 LHDYHEIIKHPMDLGTVKQKMDNREYKSPEEFAGDVRLIFTNCYKYNPPDHEVVAMARKL 489

Query: 121 HELAKKNFENLRQDSDDNEP 140
            ++ +  +  +  +   ++P
Sbjct: 490 QDVFEMRYAKMPDEPPQSDP 509



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           LPDY  +I+HPMD GT++ +L N  YA+  +  +D   + +N   YN P  D +   QA
Sbjct: 70  LPDYHRIIDHPMDLGTIKKRLENYYYASASECIQDFNTMFTNCYVYNKPGEDVVLMAQA 128


>gi|328715518|ref|XP_001943012.2| PREDICTED: peregrin-like [Acyrthosiphon pisum]
          Length = 1095

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 7/86 (8%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HPMD  T+  K+ N  Y +LE+FE D  L+ SN + YN+ +TI+++
Sbjct: 630 VDQNEVPDYGDIVKHPMDLLTMELKIKNSEYNSLEEFENDFNLMVSNCLAYNSKETIFYK 689

Query: 116 -------QARSIHELAKKNFENLRQD 134
                  Q  ++   AK++ + L  D
Sbjct: 690 AGIKMRDQGGTVLRTAKRDLKILDLD 715


>gi|222422933|dbj|BAH19453.1| AT5G14270 [Arabidopsis thaliana]
          Length = 549

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 42/71 (59%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DY  VIEHPMD GTV+NKL +G Y+   +F  DV L  SNAM YN P    +  A ++ +
Sbjct: 170 DYFNVIEHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRK 229

Query: 123 LAKKNFENLRQ 133
             +  ++ L +
Sbjct: 230 FFEVRWKTLEK 240


>gi|347839948|emb|CCD54520.1| similar to histone acetyltransferase gcn5 [Botryotinia fuckeliana]
          Length = 372

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D + + DYC +I HPMD  T++ KL  G Y T + F +DV LI  N  QYN P+TI+ R
Sbjct: 290 VDVKLVEDYCTIIAHPMDLQTMQQKLDQGLYDTPKDFVEDVKLIIKNCRQYNKPNTIFCR 349

Query: 116 QARSIHELAKKNF 128
               + E A K+F
Sbjct: 350 HVTKL-EKAMKDF 361


>gi|149034726|gb|EDL89463.1| bromodomain containing 4, isoform CRA_b [Rattus norvegicus]
          Length = 723

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 388 LHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 447

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 448 QDVFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAPP 484



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|226246640|ref|NP_932762.2| bromodomain-containing protein 4 isoform 2 [Mus musculus]
 gi|148708380|gb|EDL40327.1| bromodomain containing 4, isoform CRA_b [Mus musculus]
 gi|187951219|gb|AAI38836.1| Bromodomain containing 4 [Mus musculus]
 gi|187952057|gb|AAI38835.1| Bromodomain containing 4 [Mus musculus]
          Length = 723

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 388 LHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 447

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 448 QDVFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAPP 484



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|406603756|emb|CCH44781.1| Histone acetyltransferase GCN5 [Wickerhamomyces ciferrii]
          Length = 444

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 50/84 (59%)

Query: 40  LYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLI 99
           L +++++  S      ++ +E+PDY EVI+ PMD  T+ +KL N  Y+TLE+F  D  LI
Sbjct: 345 LTELQNHTASWPFSTPVNKDEIPDYYEVIKEPMDLSTMESKLENDHYSTLEEFVYDSKLI 404

Query: 100 CSNAMQYNAPDTIYFRQARSIHEL 123
            +N  +YN   T YF+ A  + + 
Sbjct: 405 FNNCRKYNNETTTYFKNANKLEKF 428


>gi|148708381|gb|EDL40328.1| bromodomain containing 4, isoform CRA_c [Mus musculus]
          Length = 734

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 399 LHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 458

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 459 QDVFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAPP 495



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 105 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 164

Query: 121 HEL 123
            +L
Sbjct: 165 EKL 167


>gi|242022015|ref|XP_002431437.1| Bromodomain and PHD finger-containing protein, putative [Pediculus
           humanus corporis]
 gi|212516725|gb|EEB18699.1| Bromodomain and PHD finger-containing protein, putative [Pediculus
           humanus corporis]
          Length = 1244

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 49/81 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D +E+PDY +V++ PMD  T++ K+ N  Y++++  E D  L+ SN + YNA DTI++R
Sbjct: 617 VDLKEVPDYTDVVKQPMDLSTIKLKIDNFEYSSIDDLEMDFNLMISNCLAYNAKDTIFYR 676

Query: 116 QARSIHELAKKNFENLRQDSD 136
               + +         R+D++
Sbjct: 677 AGLRMRDQGGAIIRAARKDAE 697


>gi|18308127|gb|AAL67834.1|AF461396_1 bromodomain-containing protein BRD4 short variant [Mus musculus]
          Length = 723

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 388 LHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 447

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 448 QDVFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAPP 484



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|440790347|gb|ELR11630.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 2175

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 11/101 (10%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA-- 117
           +LPDY EV++ PMD GT+ +KL +G YA + +F  D+ L+ SN + YN PD      A  
Sbjct: 84  DLPDYWEVVKRPMDLGTIGDKLTSGQYAKVSEFLDDLELVWSNCLLYNPPDDPISEWATL 143

Query: 118 --RSIHELAKK----NFENL---RQDSDDNEPETKVVRRGR 149
             ++ H LAK+      E L    + S + +  +  VRRGR
Sbjct: 144 LRKTTHRLAKQLGVIEHEGLATKAEGSGERKERSTPVRRGR 184


>gi|13542909|gb|AAH05647.1| Brpf1 protein, partial [Mus musculus]
          Length = 706

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 154 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 213

Query: 120 IHE 122
           + E
Sbjct: 214 LRE 216


>gi|313245577|emb|CBY40264.1| unnamed protein product [Oikopleura dioica]
          Length = 1210

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 38/52 (73%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYN 107
           +DPEELPDY EVI+HPMD  T+  K+    Y T+++F  DV L+ SNA++YN
Sbjct: 764 VDPEELPDYHEVIKHPMDLATMMCKIDAHEYQTVKEFLADVKLMSSNALEYN 815


>gi|403341119|gb|EJY69855.1| hypothetical protein OXYTRI_09403 [Oxytricha trifallax]
          Length = 250

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 40/66 (60%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+ PMD  T+R  LA G Y   E+F KD+ LI  N  QYN   +  ++QA  +
Sbjct: 44  LTDYPEIIKKPMDLSTLRKNLAKGKYKKYEEFFKDLLLIWDNCKQYNIQGSDIYKQAEHL 103

Query: 121 HELAKK 126
            +++KK
Sbjct: 104 EKISKK 109


>gi|426387578|ref|XP_004060242.1| PREDICTED: bromodomain-containing protein 4 [Gorilla gorilla
           gorilla]
          Length = 1362

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 449 VFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|410053415|ref|XP_512452.4| PREDICTED: bromodomain-containing protein 4 [Pan troglodytes]
          Length = 1161

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 449 VFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    L  +    E E  +V+   RGR
Sbjct: 154 EKLFLQKINELPTE----ETEIMIVQAKGRGR 181


>gi|393217393|gb|EJD02882.1| histone acetyltransferase GCN5 [Fomitiporia mediterranea MF3/22]
          Length = 362

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 55/92 (59%)

Query: 40  LYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLI 99
           L +++++  S +    ++PE +PDY  VI++PMDF T+ +KL +  Y T++ F  D  L+
Sbjct: 268 LVELQNHSASWAFREPVNPEAVPDYYSVIKNPMDFSTMEHKLEHNLYPTMDSFVADAMLV 327

Query: 100 CSNAMQYNAPDTIYFRQARSIHELAKKNFENL 131
             N   YN   ++Y++ A  + +L K++ + +
Sbjct: 328 FRNCRTYNQEGSVYYKNAMKLEKLLKEHVQKV 359


>gi|355673863|gb|AER95194.1| bromodomain and PHD finger containing, 1 [Mustela putorius furo]
          Length = 460

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 57  EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 116

Query: 120 IHE 122
           + E
Sbjct: 117 LRE 119


>gi|27803071|emb|CAD60774.1| unnamed protein product [Podospora anserina]
          Length = 1155

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 17/114 (14%)

Query: 38  QRLYQIKSYCCSSSIDFKMDPEE---------------LPDYCEVIEHPMDFGTVRNKLA 82
           Q + +   Y C  +I  K+D E+               LPDY EVI+ PM F T+R KL 
Sbjct: 137 QLIRETSEYLCGYTI--KVDGEDHEIASGFQRLVNKRSLPDYFEVIKEPMAFSTIRGKLN 194

Query: 83  NGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSD 136
              Y + ++F  D+  IC NA  YN P    F  A  + E+ K+    L +D D
Sbjct: 195 KRTYTSFKEFVHDMTRICHNAQVYNRPSAPIFSDAGRLLEVFKEKLAELVKDGD 248



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 7/99 (7%)

Query: 57  DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD------ 110
           D  ++PDY   I +P+   T++ K     Y T++Q  +D+ L+  NAMQ+N         
Sbjct: 366 DKADMPDYYASIRNPIALDTIKKKHKRKKYTTIDQVLQDLELMFGNAMQFNEEGSQVHED 425

Query: 111 -TIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRG 148
            T   +QAR + E  K   ++  +D D   P + +  +G
Sbjct: 426 ATELLKQARLLTEEEKAKPDDEFRDEDGKLPLSHIEHKG 464


>gi|403308909|ref|XP_003944882.1| PREDICTED: bromodomain-containing protein 4 [Saimiri boliviensis
           boliviensis]
          Length = 1334

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 413 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 472

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 473 VFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 507



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 118 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 177

Query: 121 HEL 123
            +L
Sbjct: 178 EKL 180


>gi|297703913|ref|XP_002828869.1| PREDICTED: bromodomain-containing protein 4 isoform 2 [Pongo
           abelii]
          Length = 1363

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 449 VFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|345323698|ref|XP_003430739.1| PREDICTED: LOW QUALITY PROTEIN: peregrin-like [Ornithorhynchus
           anatinus]
          Length = 1158

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 41/63 (65%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   ++FE+D  LI SN ++YNA DTI++R A  
Sbjct: 626 EVPDYLDHIKKPMDFYTMKQNLEAYRYLNFDEFEEDFNLIVSNCLKYNAKDTIFYRAAVR 685

Query: 120 IHE 122
           + E
Sbjct: 686 LRE 688


>gi|397484965|ref|XP_003813634.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
           [Pan paniscus]
          Length = 1362

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 449 VFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|19718731|ref|NP_490597.1| bromodomain-containing protein 4 isoform long [Homo sapiens]
 gi|20141192|sp|O60885.2|BRD4_HUMAN RecName: Full=Bromodomain-containing protein 4; AltName:
           Full=Protein HUNK1
 gi|16589003|gb|AAL26987.1|AF386649_1 bromodomain-containing 4 [Homo sapiens]
 gi|119604879|gb|EAW84473.1| bromodomain containing 4, isoform CRA_d [Homo sapiens]
          Length = 1362

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 449 VFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|449278634|gb|EMC86435.1| ATPase family AAA domain-containing protein 2, partial [Columba
           livia]
          Length = 890

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +DPEE+PDY  VI+HPMD  TV +K+ +  Y T   F KD+ LIC+NA++YN PD
Sbjct: 663 VDPEEVPDYDTVIKHPMDLSTVLSKIDSHQYLTAGDFLKDIDLICNNALEYN-PD 716


>gi|402904600|ref|XP_003915131.1| PREDICTED: bromodomain-containing protein 4 [Papio anubis]
          Length = 1300

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 449 VFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|325652134|ref|NP_001191701.1| bromodomain-containing protein 4 [Sus scrofa]
 gi|321172828|gb|ADW77216.1| bromodomain-containing protein 4 [Sus scrofa]
          Length = 1368

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 449 VFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|189091922|ref|XP_001929794.1| hypothetical protein [Podospora anserina S mat+]
 gi|188219314|emb|CAP49294.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1051

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 17/114 (14%)

Query: 38  QRLYQIKSYCCSSSIDFKMDPEE---------------LPDYCEVIEHPMDFGTVRNKLA 82
           Q + +   Y C  +I  K+D E+               LPDY EVI+ PM F T+R KL 
Sbjct: 137 QLIRETSEYLCGYTI--KVDGEDHEIASGFQRLVNKRSLPDYFEVIKEPMAFSTIRGKLN 194

Query: 83  NGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSD 136
              Y + ++F  D+  IC NA  YN P    F  A  + E+ K+    L +D D
Sbjct: 195 KRTYTSFKEFVHDMTRICHNAQVYNRPSAPIFSDAGRLLEVFKEKLAELVKDGD 248



 Score = 42.7 bits (99), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 7/99 (7%)

Query: 57  DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD------ 110
           D  ++PDY   I +P+   T++ K     Y T++Q  +D+ L+  NAMQ+N         
Sbjct: 366 DKADMPDYYASIRNPIALDTIKKKHKRKKYTTIDQVLQDLELMFGNAMQFNEEGSQVHED 425

Query: 111 -TIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRG 148
            T   +QAR + E  K   ++  +D D   P + +  +G
Sbjct: 426 ATELLKQARLLTEEEKAKPDDEFRDEDGKLPLSHIEHKG 464


>gi|302683316|ref|XP_003031339.1| hypothetical protein SCHCODRAFT_29481 [Schizophyllum commune H4-8]
 gi|300105031|gb|EFI96436.1| hypothetical protein SCHCODRAFT_29481, partial [Schizophyllum
           commune H4-8]
          Length = 70

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/59 (49%), Positives = 39/59 (66%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y +VI+HPMDFGT+  K+  G Y +LE+F  D  L+ +NA  YN P+TIY  +A  I
Sbjct: 11  PGYTDVIKHPMDFGTMTTKVERGRYRSLEEFANDFKLVTTNAKTYNPPNTIYHTEANRI 69


>gi|18417335|ref|NP_568297.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
           thaliana]
 gi|75163656|sp|Q93YS6.1|GTE9_ARATH RecName: Full=Transcription factor GTE9; AltName: Full=BROMODOMAIN
           AND EXTRATERMINAL DOMAIN PROTEIN 9; Short=AtBET9;
           AltName: Full=Bromodomain-containing protein GTE9;
           AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
           E9
 gi|16604681|gb|AAL24133.1| putative kinase [Arabidopsis thaliana]
 gi|332004627|gb|AED92010.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
           thaliana]
          Length = 688

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 42/71 (59%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DY  VIEHPMD GTV+NKL +G Y+   +F  DV L  SNAM YN P    +  A ++ +
Sbjct: 170 DYFNVIEHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRK 229

Query: 123 LAKKNFENLRQ 133
             +  ++ L +
Sbjct: 230 FFEVRWKTLEK 240


>gi|449545082|gb|EMD36054.1| hypothetical protein CERSUDRAFT_156814 [Ceriporiopsis subvermispora
           B]
          Length = 767

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 45/73 (61%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  ++P Y ++++ PMD GT+  K+  G Y +LE+F  D+ L+ +NA  +N P TI++ 
Sbjct: 93  VDVSQVPGYADIVKRPMDLGTMTKKVEKGKYRSLEEFADDLRLVTTNAKMFNPPGTIFYT 152

Query: 116 QARSIHELAKKNF 128
           +A  I   A ++ 
Sbjct: 153 EADKIEAWALEHI 165


>gi|291413178|ref|XP_002722853.1| PREDICTED: bromodomain-containing protein 4 [Oryctolagus cuniculus]
          Length = 1346

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGRP 150
           + +  F  +      +EPE  VV    P
Sbjct: 449 VFEMRFAKM-----PDEPEEPVVAVSSP 471



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|334187679|ref|NP_001190308.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
           thaliana]
 gi|332004628|gb|AED92011.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
           thaliana]
          Length = 689

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 42/71 (59%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DY  VIEHPMD GTV+NKL +G Y+   +F  DV L  SNAM YN P    +  A ++ +
Sbjct: 170 DYFNVIEHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRK 229

Query: 123 LAKKNFENLRQ 133
             +  ++ L +
Sbjct: 230 FFEVRWKTLEK 240


>gi|345787686|ref|XP_541985.3| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
           isoform 1 [Canis lupus familiaris]
          Length = 1360

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 449 VFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|332253606|ref|XP_003275928.1| PREDICTED: bromodomain-containing protein 4 isoform 1 [Nomascus
           leucogenys]
          Length = 1364

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGRP 150
           + +  F  +      +EPE  VV    P
Sbjct: 449 VFEMRFAKM-----PDEPEEPVVAVSSP 471



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|281343180|gb|EFB18764.1| hypothetical protein PANDA_018131 [Ailuropoda melanoleuca]
          Length = 1230

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDDNEPETKVV 145
           + +  F  +      +EPE  VV
Sbjct: 449 VFEMRFAKM-----PDEPEEPVV 466



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|21619522|gb|AAH31594.1| Brpf1 protein, partial [Mus musculus]
          Length = 957

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 370 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 429

Query: 119 SIHELAKKNFENLRQDSD 136
            + E         R+ ++
Sbjct: 430 RLREQGGAVLRQARRQAE 447


>gi|395847805|ref|XP_003796555.1| PREDICTED: bromodomain-containing protein 4 [Otolemur garnettii]
          Length = 1366

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 449 VFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|7573452|emb|CAB87766.1| kinase-like protein [Arabidopsis thaliana]
          Length = 703

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 42/71 (59%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DY  VIEHPMD GTV+NKL +G Y+   +F  DV L  SNAM YN P    +  A ++ +
Sbjct: 170 DYFNVIEHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRK 229

Query: 123 LAKKNFENLRQ 133
             +  ++ L +
Sbjct: 230 FFEVRWKTLEK 240


>gi|301785596|ref|XP_002928216.1| PREDICTED: bromodomain-containing protein 4-like [Ailuropoda
           melanoleuca]
          Length = 1260

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
           + +  F  +      +EPE  VV        PPTK    P
Sbjct: 449 VFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|294880237|ref|XP_002768937.1| transcription factor GTE6, putative [Perkinsus marinus ATCC 50983]
 gi|239871966|gb|EER01655.1| transcription factor GTE6, putative [Perkinsus marinus ATCC 50983]
          Length = 244

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 56  MDP--EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
           +DP  +E  DY  V++HPMDFGT+R KL  G Y     F +D  L+ +N   YNAP+T  
Sbjct: 122 VDPVRDECSDYFTVVKHPMDFGTIRKKLHKGEYEDALGFYEDCDLVFTNCALYNAPETFV 181

Query: 114 FRQARSI 120
            +Q R I
Sbjct: 182 MQQCRKI 188


>gi|380017223|ref|XP_003692559.1| PREDICTED: LOW QUALITY PROTEIN: peregrin-like [Apis florea]
          Length = 894

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY E++ HPMD  T++ K+    Y T+  FE D  L+ +N + YN  DT+++R   
Sbjct: 554 KEVPDYLEIVSHPMDLSTMQTKIERQEYDTIGAFEADFNLMVNNCLAYNRKDTMFYRAGI 613

Query: 119 SIHELAKKNFENLRQDSDDNEP 140
            + E      E  R+D  + +P
Sbjct: 614 KMKEQGGVLIEQARKDYPELDP 635


>gi|290994154|ref|XP_002679697.1| bromodomain-containing protein [Naegleria gruberi]
 gi|284093315|gb|EFC46953.1| bromodomain-containing protein [Naegleria gruberi]
          Length = 1158

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 1/75 (1%)

Query: 58  PEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           P+E+P+Y E I+ PMDF T++ K+ +   + + +FEK +  I SNA ++N PDT+Y+ +A
Sbjct: 244 PKEVPNYYETIKKPMDFATLKKKVTDHKLS-ISKFEKYMLRIFSNATKFNLPDTLYYAEA 302

Query: 118 RSIHELAKKNFENLR 132
             I +L+ +  E L+
Sbjct: 303 VRISKLSTELVEKLK 317



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 12/98 (12%)

Query: 31  LSWNWDPQRLYQIKSYCCSSSIDFKMDP--EELPDYCEVIEHPMDFGTVRNKLANGAYAT 88
           L W    ++L  I  Y       FK DP  +++P+Y   I+ PMD  T++ K+ +  Y  
Sbjct: 446 LVW----KKLMSIDEYLI-----FK-DPVSKDVPNYHNTIKTPMDLTTIKGKIDDKKYTK 495

Query: 89  LEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKK 126
             +FE DV L+  N   +N+ D+IY ++A   H   +K
Sbjct: 496 WREFEDDVDLVYDNCKTFNSQDSIYSKEANRQHRWFRK 533



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 42/71 (59%)

Query: 58  PEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           PE+   Y +VI++PMD  +++ KL  G Y+++ +F +D+ +I +NA ++N   +  F+ A
Sbjct: 129 PEKEKQYYQVIDNPMDLSSIQAKLLLGKYSSIGKFRQDLDIIHNNAEKFNGQASPIFKAA 188

Query: 118 RSIHELAKKNF 128
             +  +  K  
Sbjct: 189 ERLKSIYTKEL 199



 Score = 38.9 bits (89), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 18/71 (25%), Positives = 40/71 (56%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P+Y   I+H +    + +   N  Y T++QF  D+ L+ +N   + +P++   ++++++ 
Sbjct: 624 PNYSNQIKHSICLSMIASNCNNKHYKTIDQFINDIDLLHTNTSTFFSPNSKEAKESKALL 683

Query: 122 ELAKKNFENLR 132
            LAK+  + LR
Sbjct: 684 NLAKEKAQPLR 694


>gi|170595562|ref|XP_001902432.1| bromodomain containing protein [Brugia malayi]
 gi|158589907|gb|EDP28724.1| bromodomain containing protein [Brugia malayi]
          Length = 85

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/59 (45%), Positives = 38/59 (64%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           PDY E+I+ PMDF T+R K+    Y  +  F+KD  LI  NAM YN+P T+Y+  A+ +
Sbjct: 3   PDYHEIIKEPMDFATIRQKIDRDDYPDITTFKKDAELIVHNAMDYNSPGTVYYIAAQKM 61


>gi|320168602|gb|EFW45501.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1313

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 40/58 (68%)

Query: 63   DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
            DY  VI+ P+D GT++ K+ N  Y T+++FEKDV L+ SNA  YN PD+ Y  +A ++
Sbjct: 944  DYLRVIKQPIDLGTIQRKVENFGYFTVDEFEKDVQLLISNARTYNTPDSAYHSEAVAL 1001


>gi|194223682|ref|XP_001914731.1| PREDICTED: bromodomain-containing protein 4 [Equus caballus]
          Length = 1364

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDDNEPETKVV 145
           + +  F  +      +EPE  VV
Sbjct: 449 VFEMRFAKM-----PDEPEEPVV 466



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|344283171|ref|XP_003413346.1| PREDICTED: bromodomain-containing protein 4-like [Loxodonta
           africana]
          Length = 965

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 387 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 446

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 447 QDVFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 45.4 bits (106), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|326669898|ref|XP_001919047.3| PREDICTED: bromodomain and PHD finger-containing protein 3 [Danio
           rerio]
          Length = 1207

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 42/66 (63%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY E I HPMDF T+++KL    Y ++   E D  L+ SN + YNA DT++++ A 
Sbjct: 619 KEVPDYLEFITHPMDFSTMQSKLEAHKYRSVTDLEADFNLMISNCLLYNAKDTVFYQAAI 678

Query: 119 SIHELA 124
            + +L 
Sbjct: 679 RLRDLG 684


>gi|443685124|gb|ELT88839.1| hypothetical protein CAPTEDRAFT_220552 [Capitella teleta]
          Length = 657

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 35/59 (59%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I  PMD  T+R K+  G Y T   +  D  L+C NAM YN PDT+Y++ A+ +
Sbjct: 159 PMYSRIISSPMDLSTMRTKIDAGEYETFPDYRADFKLMCENAMTYNLPDTVYYKGAQKL 217


>gi|341880362|gb|EGT36297.1| hypothetical protein CAEBREN_29239 [Caenorhabditis brenneri]
          Length = 1431

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 48/89 (53%)

Query: 60   ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
            ELP+Y EVI  PMDF  +  KL NG Y  LE+   D+ L+ SNA  +N   +  +  + +
Sbjct: 1324 ELPEYYEVIAKPMDFDRIYKKLHNGRYLELEELNDDMMLLVSNAQTFNEEGSEIYIDSET 1383

Query: 120  IHELAKKNFENLRQDSDDNEPETKVVRRG 148
            I +L K+ +   ++   + EP T +  R 
Sbjct: 1384 IGKLWKEQYNKFKESLHEQEPRTPLTSRN 1412


>gi|310795019|gb|EFQ30480.1| hypothetical protein GLRG_05624 [Glomerella graminicola M1.001]
          Length = 1087

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 41/72 (56%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           +LPDY E+IE+P+ F T+R+K+    Y    +F  DV  IC NA  YN   +  F+ A  
Sbjct: 149 QLPDYFEIIENPIAFSTIRHKIQKKQYTAFSEFVHDVAQICHNAQVYNRSSSAIFKSATV 208

Query: 120 IHELAKKNFENL 131
           I +L K+  + L
Sbjct: 209 IRDLLKQELQTL 220


>gi|392597793|gb|EIW87115.1| TATA-binding protein associated factor Taf2 [Coniophora puteana
            RWD-64-598 SS2]
          Length = 1830

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 41/67 (61%)

Query: 62   PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
            P Y E IEHPMDFGT+  KL+ G Y+T+E+F KD  L+  N  Q+N P T     A  + 
Sbjct: 1622 PTYYEEIEHPMDFGTMSTKLSKGQYSTMEEFAKDAGLVFDNCRQFNPPTTYPVNCADLVE 1681

Query: 122  ELAKKNF 128
            ++ +K +
Sbjct: 1682 KVFRKEW 1688



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 10/118 (8%)

Query: 56   MDP--EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
            +DP  +  P+Y  VI++PMD  T+  K+ NG Y     FE D  L+ SNA +YN   T  
Sbjct: 1256 VDPVRDHAPNYYNVIKNPMDLSTMNAKVENGKYKDRFAFESDFRLMISNAKRYNPAGTYA 1315

Query: 114  FRQARSIHELAKKNF----ENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERA 167
              +A  +    +K +    + L   S  NEPE         P+   K+P+ RP++  A
Sbjct: 1316 HTEALGLEAFFEKLWTRINKTLEAASKANEPEA----LDHLPSITVKRPVARPTISTA 1369



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 61   LPDYCEVI--EHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
            +P Y EVI  +   D  T+R+KL    Y ++E FE D+ L+  NA+ +N  D+   + A 
Sbjct: 1731 IPTYFEVIPRKDARDLRTIRHKLDADKYDSIEAFEADIDLMIRNAITFNGVDSEVGKLAG 1790

Query: 119  SIHELAKKNFENLR 132
            ++ +  K    N+R
Sbjct: 1791 ALEDRIKDLLSNMR 1804


>gi|317038280|ref|XP_001401977.2| transcription regulator BDF1 [Aspergillus niger CBS 513.88]
          Length = 835

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 3/142 (2%)

Query: 56  MDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
           +DP +L  P Y + I+ PMD GT+  KL N  Y T +    D  L+  NA+ +N PD + 
Sbjct: 309 VDPIKLNVPHYPQFIKRPMDLGTIEKKLKNNVYRTAQAVIDDFNLMVQNALTFNGPDHLV 368

Query: 114 FRQARSIHELAKKNFENL-RQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFS 172
            ++ + +     K   NL R D  + +   K V +     +   +P   PS  RA     
Sbjct: 369 AQEGQKLKITFDKQMANLPRADEVEEKKPKKSVAKPSTAIRRDHRPAPSPSTARATGASP 428

Query: 173 SDVTLASGAENTALTNRDLGNG 194
              T A G E   L  RD  N 
Sbjct: 429 QATTFALGPEGLPLIRRDSANA 450



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 3/96 (3%)

Query: 40  LYQIKSYCCSSSIDFKMDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           L++ K Y  +      +DP  L  P Y  +I+ PMDF TV++KL  G Y   ++FE D+ 
Sbjct: 490 LHKPKHYTYAMPFYHPVDPVALNIPTYHSIIKKPMDFSTVQSKLRAGQYENAKEFELDMR 549

Query: 98  LICSNAMQYNAP-DTIYFRQARSIHELAKKNFENLR 132
           LI  N  ++N P D  Y    R   E  KK  +  R
Sbjct: 550 LILKNCFKFNIPGDPTYMAGQRLEEEFNKKWAQKTR 585


>gi|449019454|dbj|BAM82856.1| similar to transcriptional activator GCN5, a bromodomain protein
           [Cyanidioschyzon merolae strain 10D]
          Length = 605

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 45/77 (58%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           EE+PDY E I  PMD  T+R +L +G Y +LE+F +D  L+  NA+ YN P +  +  A+
Sbjct: 406 EEVPDYYEYIRKPMDLTTMRQRLESGQYPSLEKFMEDANLVWRNAVSYNRPRSAVWHTAK 465

Query: 119 SIHELAKKNFENLRQDS 135
              ++      ++++ +
Sbjct: 466 QFKKVVATQLASMKESA 482


>gi|194765675|ref|XP_001964952.1| GF21787 [Drosophila ananassae]
 gi|190617562|gb|EDV33086.1| GF21787 [Drosophila ananassae]
          Length = 863

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 2/72 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I  PMDF T+R K+ +  Y++L +F  D  L+C NA++YN  DT+Y + A+ + 
Sbjct: 311 PGYSSIISKPMDFSTMRQKIDDHEYSSLTEFSDDFKLMCENAIKYNHVDTVYNKAAKRLL 370

Query: 122 ELAKKNF--ENL 131
           ++  K+   ENL
Sbjct: 371 QVGLKHLQPENL 382


>gi|405961105|gb|EKC26959.1| Nucleosome-remodeling factor subunit BPTF [Crassostrea gigas]
          Length = 269

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 43/78 (55%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DPE+ PDY  +I++PMDFGT++ KL   +Y+  E F  D+ L+  N   YN P ++  R
Sbjct: 168 VDPEDAPDYYSIIKNPMDFGTIKKKLEGLSYSDYEDFHSDMLLVRDNCRLYNPPGSVVRR 227

Query: 116 QARSIHELAKKNFENLRQ 133
               +       +E + +
Sbjct: 228 DCDEVFAYYMSEYERILE 245


>gi|328721183|ref|XP_001944009.2| PREDICTED: bromodomain-containing protein 7-like [Acyrthosiphon
           pisum]
          Length = 819

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 37/59 (62%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P+Y  +I  PMDF T+R  + +  Y +L  F  D  L+C NAM YN P+TIY++ A+ +
Sbjct: 271 PNYSRLISKPMDFETIRRSIQSDLYTSLNAFVADFKLMCENAMTYNQPETIYYKAAKRL 329


>gi|403411321|emb|CCL98021.1| predicted protein [Fibroporia radiculosa]
          Length = 772

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 14/125 (11%)

Query: 40  LYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLI 99
           + QIK     +     +D  ++  Y +V++ PMD GT+  K+  G Y +LE+F  D+ L+
Sbjct: 71  IVQIKKKDDYAFFLHPVDTSQVAGYTDVVKRPMDLGTMTTKVERGKYRSLEEFADDLRLV 130

Query: 100 CSNAMQYNAPDTIYFRQARSIHELAKKNFE-------------NLRQDSDDN-EPETKVV 145
            +NA  +N P TIY  +A  I     ++               N+  + DDN EP+  V 
Sbjct: 131 TTNAKLFNPPGTIYHTEAERIEAWGLEHITKAAASVIEYETDWNIEIERDDNEEPDLGVT 190

Query: 146 RRGRP 150
            +G P
Sbjct: 191 DKGTP 195


>gi|328788637|ref|XP_624214.3| PREDICTED: hypothetical protein LOC551826 [Apis mellifera]
          Length = 1492

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 5/88 (5%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY ++I+ PMD GTV+ K+ N  Y T ++F  DV LI +N  +YN PD      AR +
Sbjct: 445 LHDYHDIIKKPMDLGTVKTKMDNREYKTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKL 504

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRG 148
            ++    FE +R     +EP   +V +G
Sbjct: 505 QDV----FE-MRYAKIPDEPMGSIVVKG 527



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           LPDY ++I+ PMD GT++ +L N  Y + ++  +D   + +N   YN P  D +   QA
Sbjct: 102 LPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQA 160


>gi|6856566|gb|AAF29981.1|AF197953_1 histone acetyltransferase GCN5 [Toxoplasma gondii]
 gi|221483205|gb|EEE21529.1| histone acetyltransferase GCN5, putative [Toxoplasma gondii GT1]
          Length = 1169

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 41/72 (56%)

Query: 60   ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
            E PDY EV+  P+D  T++ +  NG Y T E F++D+ L+  N   YN+PDTIY++ A  
Sbjct: 1095 EAPDYYEVVRRPIDISTMKKRNRNGDYRTKEAFQEDLLLMFDNCRVYNSPDTIYYKYADE 1154

Query: 120  IHELAKKNFENL 131
            +        E L
Sbjct: 1155 LQAFIWPKVEAL 1166


>gi|221504128|gb|EEE29805.1| histone acetyltransferase GCN5, putative [Toxoplasma gondii VEG]
          Length = 1169

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 41/72 (56%)

Query: 60   ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
            E PDY EV+  P+D  T++ +  NG Y T E F++D+ L+  N   YN+PDTIY++ A  
Sbjct: 1095 EAPDYYEVVRRPIDISTMKKRNRNGDYRTKEAFQEDLLLMFDNCRVYNSPDTIYYKYADE 1154

Query: 120  IHELAKKNFENL 131
            +        E L
Sbjct: 1155 LQAFIWPKVEAL 1166


>gi|45501005|gb|AAH67129.1| BRD4 protein, partial [Homo sapiens]
 gi|116283901|gb|AAH47888.1| BRD4 protein [Homo sapiens]
          Length = 548

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 387 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 446

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 447 QDVFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    L  +    E E  +V+   RGR
Sbjct: 154 EKLFLQKINELPTE----ETEIMIVQAKGRGR 181


>gi|71052031|gb|AAH35266.1| BRD4 protein [Homo sapiens]
 gi|119604876|gb|EAW84470.1| bromodomain containing 4, isoform CRA_b [Homo sapiens]
 gi|119604877|gb|EAW84471.1| bromodomain containing 4, isoform CRA_b [Homo sapiens]
          Length = 794

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 387 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 446

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 447 QDVFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    L  +    E E  +V+   RGR
Sbjct: 154 EKLFLQKINELPTE----ETEIMIVQAKGRGR 181


>gi|60649450|gb|AAH91649.1| BRD4 protein, partial [Homo sapiens]
          Length = 550

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 387 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 446

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 447 QDVFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    L  +    E E  +V+   RGR
Sbjct: 154 EKLFLQKINELPTE----ETEIMIVQAKGRGR 181


>gi|383417065|gb|AFH31746.1| bromodomain-containing protein 4 isoform short [Macaca mulatta]
 gi|387541550|gb|AFJ71402.1| bromodomain-containing protein 4 isoform short [Macaca mulatta]
          Length = 721

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 387 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 446

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 447 QDVFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|116283228|gb|AAH00156.1| BRD4 protein [Homo sapiens]
 gi|116283846|gb|AAH38988.1| BRD4 protein [Homo sapiens]
          Length = 549

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 387 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 446

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 447 QDVFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    L  +    E E  +V+   RGR
Sbjct: 154 EKLFLQKINELPTE----ETEIMIVQAKGRGR 181


>gi|33879612|gb|AAH30158.1| BRD4 protein, partial [Homo sapiens]
          Length = 548

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 387 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 446

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 447 QDVFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    L  +    E E  +V+   RGR
Sbjct: 154 EKLFLQKINELPTE----ETEIMIVQAKGRGR 181


>gi|3184498|gb|AAC27978.1| R31546_1 [Homo sapiens]
          Length = 731

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 398 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 457

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 458 QDVFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 494



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 105 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 164

Query: 121 HEL 123
            +L
Sbjct: 165 EKL 167


>gi|380792783|gb|AFE68267.1| bromodomain-containing protein 4 isoform short, partial [Macaca
           mulatta]
          Length = 553

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 387 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 446

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 447 QDVFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    L  +    E E  +V+   RGR
Sbjct: 154 EKLFLQKINELPTE----ETEIMIVQAKGRGR 181


>gi|7657218|ref|NP_055114.1| bromodomain-containing protein 4 isoform short [Homo sapiens]
 gi|3115204|emb|CAA72780.1| HUNKI [Homo sapiens]
 gi|119604875|gb|EAW84469.1| bromodomain containing 4, isoform CRA_a [Homo sapiens]
 gi|410224242|gb|JAA09340.1| bromodomain containing 4 [Pan troglodytes]
 gi|410259614|gb|JAA17773.1| bromodomain containing 4 [Pan troglodytes]
 gi|410299992|gb|JAA28596.1| bromodomain containing 4 [Pan troglodytes]
          Length = 722

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 387 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 446

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 447 QDVFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|297670740|ref|XP_002813516.1| PREDICTED: peregrin isoform 1 [Pongo abelii]
          Length = 1220

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|403270348|ref|XP_003927148.1| PREDICTED: peregrin isoform 2 [Saimiri boliviensis boliviensis]
          Length = 1220

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|356557783|ref|XP_003547190.1| PREDICTED: transcription factor GTE8-like [Glycine max]
          Length = 565

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 6/88 (6%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY  +I HPMD GT+++KL    Y+  E+F  DV L  SNAM+YN P       A+ +
Sbjct: 110 IPDYFTIISHPMDLGTIKSKLEKNIYSGTEEFAADVRLTFSNAMKYNPPSNDVHLMAKEL 169

Query: 121 HELAKKNFENL------RQDSDDNEPET 142
            ++  + +++L        + D +E ET
Sbjct: 170 SKIFDRKWKDLGRKWKCEDEHDKSESET 197


>gi|367032436|ref|XP_003665501.1| hypothetical protein MYCTH_108504 [Myceliophthora thermophila ATCC
           42464]
 gi|347012772|gb|AEO60256.1| hypothetical protein MYCTH_108504 [Myceliophthora thermophila ATCC
           42464]
          Length = 945

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 13/91 (14%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY EVI+ PM F T+R KL   AY    +F  DV  IC NA  YN P    F  A  +
Sbjct: 149 LPDYFEVIKEPMAFSTIRAKLGKKAYTKFSEFVHDVTRICHNAQVYNRPSAPIFSDAGRL 208

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGRPP 151
            ++ K+    ++             +RGRPP
Sbjct: 209 LQVFKEKLAEMK-------------KRGRPP 226


>gi|395824508|ref|XP_003785505.1| PREDICTED: peregrin [Otolemur garnettii]
          Length = 1220

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|355673426|gb|AER95168.1| bromodomain containing 4 [Mustela putorius furo]
          Length = 551

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 397 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 456

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 457 QDVFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 493



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 104 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 163

Query: 121 HELAKKNFENLRQDSDDNEPETKVVR---RGR 149
            +L  +    L  +    E E  +V+   RGR
Sbjct: 164 EKLFLQKINELPTE----ETEIMIVQAKGRGR 191


>gi|332231619|ref|XP_003264991.1| PREDICTED: peregrin isoform 2 [Nomascus leucogenys]
          Length = 1220

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|123478068|ref|XP_001322198.1| Bromodomain containing protein [Trichomonas vaginalis G3]
 gi|121905040|gb|EAY09975.1| Bromodomain containing protein [Trichomonas vaginalis G3]
          Length = 237

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 2/70 (2%)

Query: 55  KMDPEE--LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTI 112
           K+DPE    PDY E+++ PMD  TV+ KLA G Y T++ F  DV LI  NA  YN   T+
Sbjct: 28  KVDPERDGAPDYLEIVKQPMDLSTVKKKLAAGEYKTIDLFTSDVNLIWKNAKLYNEEGTL 87

Query: 113 YFRQARSIHE 122
               AR + E
Sbjct: 88  LHLIARELEE 97


>gi|73984725|ref|XP_850615.1| PREDICTED: peregrin isoform 2 [Canis lupus familiaris]
          Length = 1220

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|159164012|pdb|2D9E|A Chain A, Solution Structure Of The Bromodomain Of Peregrin
 gi|429544121|pdb|2RS9|B Chain B, Solution Structure Of The Bromodomain Of Human Brpf1 In
           Complex With Histone H4k5ac Peptide
          Length = 121

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 36  EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 95

Query: 120 IHE 122
           + E
Sbjct: 96  LRE 98


>gi|51173720|ref|NP_001003694.1| peregrin isoform 1 [Homo sapiens]
 gi|426339319|ref|XP_004033598.1| PREDICTED: peregrin isoform 2 [Gorilla gorilla gorilla]
 gi|31753086|gb|AAH53851.1| Bromodomain and PHD finger containing, 1 [Homo sapiens]
          Length = 1220

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|332816021|ref|XP_003309650.1| PREDICTED: LOW QUALITY PROTEIN: peregrin [Pan troglodytes]
          Length = 1220

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|426249196|ref|XP_004018336.1| PREDICTED: peregrin isoform 1 [Ovis aries]
          Length = 1219

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|19074752|ref|NP_586258.1| TRANSCRIPTIONAL ACTIVATOR [Encephalitozoon cuniculi GB-M1]
 gi|19069394|emb|CAD25862.1| TRANSCRIPTIONAL ACTIVATOR [Encephalitozoon cuniculi GB-M1]
          Length = 396

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 44/78 (56%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DP E+PDY + I  PMD  T+  KL N  Y  +E F  DV L+ +N  +YN  DT Y++
Sbjct: 307 VDPAEVPDYYKCIAKPMDLSTMVLKLRNNEYGCIEAFVADVHLMVNNCFEYNGRDTQYYK 366

Query: 116 QARSIHELAKKNFENLRQ 133
            A+++ +   K  E  R 
Sbjct: 367 CAQALLDHFNKKLEFYRH 384


>gi|301779337|ref|XP_002925080.1| PREDICTED: peregrin-like isoform 1 [Ailuropoda melanoleuca]
 gi|281354158|gb|EFB29742.1| hypothetical protein PANDA_014517 [Ailuropoda melanoleuca]
          Length = 1220

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|440896054|gb|ELR48091.1| Peregrin [Bos grunniens mutus]
          Length = 1203

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|402859460|ref|XP_003894177.1| PREDICTED: peregrin isoform 2 [Papio anubis]
          Length = 1220

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|397486339|ref|XP_003814287.1| PREDICTED: peregrin isoform 2 [Pan paniscus]
 gi|410266266|gb|JAA21099.1| bromodomain and PHD finger containing, 1 [Pan troglodytes]
 gi|410292248|gb|JAA24724.1| bromodomain and PHD finger containing, 1 [Pan troglodytes]
 gi|410335059|gb|JAA36476.1| bromodomain and PHD finger containing, 1 [Pan troglodytes]
          Length = 1220

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|254572529|ref|XP_002493374.1| Histone acetyltransferase, acetylates N-terminal lysines on
           histones H2B and H3 [Komagataella pastoris GS115]
 gi|238033172|emb|CAY71195.1| Histone acetyltransferase, acetylates N-terminal lysines on
           histones H2B and H3 [Komagataella pastoris GS115]
 gi|328352611|emb|CCA39009.1| histone acetyltransferase [Komagataella pastoris CBS 7435]
          Length = 448

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 40/70 (57%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++ EE+PDY EVI+ PMD  T+  KL N  Y TLE F  D  LI +N   YN   T Y++
Sbjct: 365 VNREEVPDYYEVIKEPMDLSTMETKLENDHYHTLEDFIYDATLIFNNCRSYNNESTTYYK 424

Query: 116 QARSIHELAK 125
            A  + +  K
Sbjct: 425 NANKLEKFMK 434


>gi|119584379|gb|EAW63975.1| bromodomain and PHD finger containing, 1, isoform CRA_d [Homo
           sapiens]
          Length = 1219

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|109034684|ref|XP_001094039.1| PREDICTED: peregrin isoform 3 [Macaca mulatta]
 gi|355559465|gb|EHH16193.1| Bromodomain and PHD finger-containing protein 1 [Macaca mulatta]
 gi|355746540|gb|EHH51154.1| Bromodomain and PHD finger-containing protein 1 [Macaca
           fascicularis]
          Length = 1220

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|431899908|gb|ELK07855.1| Peregrin [Pteropus alecto]
          Length = 1241

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|410951646|ref|XP_003982504.1| PREDICTED: peregrin isoform 2 [Felis catus]
          Length = 1220

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|348556654|ref|XP_003464136.1| PREDICTED: peregrin-like isoform 2 [Cavia porcellus]
          Length = 1219

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|209879670|ref|XP_002141275.1| bromodomain-containing protein [Cryptosporidium muris RN66]
 gi|209556881|gb|EEA06926.1| bromodomain-containing protein [Cryptosporidium muris RN66]
          Length = 943

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 44/77 (57%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++ E +PDY +VI++PMDF T+RNK+    Y   E FE D+ LI +N   YN   T+ +R
Sbjct: 164 VNAELVPDYYQVIKNPMDFSTMRNKVVQEEYKDFESFESDIRLIITNCYTYNRIGTVVYR 223

Query: 116 QARSIHELAKKNFENLR 132
               + E   K+ E  R
Sbjct: 224 MGLILEETWDKSKEASR 240


>gi|432110870|gb|ELK34344.1| Peregrin [Myotis davidii]
          Length = 1219

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|329663383|ref|NP_001193018.1| peregrin [Bos taurus]
 gi|296475103|tpg|DAA17218.1| TPA: bromodomain and PHD finger containing, 1-like isoform 1 [Bos
           taurus]
          Length = 1219

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|332253608|ref|XP_003275929.1| PREDICTED: bromodomain-containing protein 4 isoform 2 [Nomascus
           leucogenys]
          Length = 722

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 5/90 (5%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 387 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 446

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGRP 150
            ++ +  F  +      +EPE  VV    P
Sbjct: 447 QDVFEMRFAKM-----PDEPEEPVVAVSSP 471



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|296225796|ref|XP_002758653.1| PREDICTED: peregrin isoform 1 [Callithrix jacchus]
          Length = 1220

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|350591400|ref|XP_003483259.1| PREDICTED: peregrin [Sus scrofa]
          Length = 1220

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|47497992|ref|NP_998862.1| bromodomain-containing protein 9 [Xenopus (Silurana) tropicalis]
 gi|82185671|sp|Q6NVM8.1|BRD9_XENTR RecName: Full=Bromodomain-containing protein 9
 gi|45709778|gb|AAH67977.1| bromodomain containing 9 [Xenopus (Silurana) tropicalis]
          Length = 596

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 41/59 (69%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I++PMDF T++ K++   Y ++ +F+ D  L+C NAM YN P+T+Y++ A+ +
Sbjct: 183 PGYFMIIKNPMDFSTMKEKISQNEYKSVTEFKADFKLMCDNAMTYNRPETVYYKLAKKL 241


>gi|297807455|ref|XP_002871611.1| ATBET9 [Arabidopsis lyrata subsp. lyrata]
 gi|297317448|gb|EFH47870.1| ATBET9 [Arabidopsis lyrata subsp. lyrata]
          Length = 690

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 42/71 (59%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DY  VI+HPMD GTV+NKL +G Y+   +F  DV L  SNAM YN P    F  A ++ +
Sbjct: 170 DYFNVIKHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVFVMADTLRK 229

Query: 123 LAKKNFENLRQ 133
             +  ++ L +
Sbjct: 230 FFEVRWKTLEK 240


>gi|115447147|ref|NP_001047353.1| Os02g0601800 [Oryza sativa Japonica Group]
 gi|47497295|dbj|BAD19337.1| putative global transcription factor group E [Oryza sativa Japonica
           Group]
 gi|47848299|dbj|BAD22163.1| putative global transcription factor group E [Oryza sativa Japonica
           Group]
 gi|113536884|dbj|BAF09267.1| Os02g0601800 [Oryza sativa Japonica Group]
 gi|222623188|gb|EEE57320.1| hypothetical protein OsJ_07416 [Oryza sativa Japonica Group]
          Length = 714

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 2/70 (2%)

Query: 40  LYQIKSYCCSSSIDFKMDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           L ++ +  CS+  D  +D  +L  PDY ++I+ PMD GT+RNKL +G+Y +  +F  DV 
Sbjct: 175 LKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTSPSEFAADVR 234

Query: 98  LICSNAMQYN 107
           L  SNAM YN
Sbjct: 235 LTFSNAMTYN 244


>gi|354468925|ref|XP_003496900.1| PREDICTED: peregrin-like [Cricetulus griseus]
          Length = 1218

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 665 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 724

Query: 119 SIHE 122
            + E
Sbjct: 725 RLRE 728


>gi|299116162|emb|CBN76069.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 582

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 9/101 (8%)

Query: 35  WDPQRLYQIKSYCCSSSIDFK--MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQF 92
           WD  R+Y+ K      +I F+  ++P++ P Y E+I+ PMD   +R ++ +GA  +L+  
Sbjct: 305 WD--RVYRHKF-----AIIFRKAVNPKDAPGYEEIIKEPMDLSLIRERIMSGALLSLDDM 357

Query: 93  EKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQ 133
            +D+ ++C+NAM +N  D  YF  ++ +   A +  E  R+
Sbjct: 358 SRDLCVMCNNAMVFNGKDDPYFDYSKELRTYANEVIEEARR 398


>gi|219519842|gb|AAI45257.1| Brpf1 protein [Mus musculus]
          Length = 1218

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 665 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 724

Query: 119 SIHE 122
            + E
Sbjct: 725 RLRE 728


>gi|363747028|ref|XP_003643891.1| PREDICTED: bromodomain-containing protein 4-like [Gallus gallus]
          Length = 1354

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL N  Y   ++F  DV L+ SN  +YN  D      AR +
Sbjct: 402 LHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKL 461

Query: 121 HELAKKNFENLRQDSDDNEPETKVV 145
            ++ +  F  +      +EPE  V+
Sbjct: 462 QDVFEMRFAKM-----PDEPEEPVI 481



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 112 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 171

Query: 121 HELAKKNFENLRQDSDDNEPETKVV 145
            +L  +    + Q+      ET++V
Sbjct: 172 EKLFLQKISEMTQE------ETEIV 190


>gi|149728307|ref|XP_001495114.1| PREDICTED: peregrin isoform 1 [Equus caballus]
          Length = 1220

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|291412482|ref|XP_002722500.1| PREDICTED: bromodomain and PHD finger-containing protein 1 isoform
           1 [Oryctolagus cuniculus]
          Length = 1219

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|218191119|gb|EEC73546.1| hypothetical protein OsI_07959 [Oryza sativa Indica Group]
          Length = 714

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 2/70 (2%)

Query: 40  LYQIKSYCCSSSIDFKMDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           L ++ +  CS+  D  +D  +L  PDY ++I+ PMD GT+RNKL +G+Y +  +F  DV 
Sbjct: 175 LKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTSPSEFAADVR 234

Query: 98  LICSNAMQYN 107
           L  SNAM YN
Sbjct: 235 LTFSNAMTYN 244


>gi|351710981|gb|EHB13900.1| Peregrin [Heterocephalus glaber]
          Length = 1213

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIISNCLKYNAKDTIFYRAAV 725

Query: 119 SIHE 122
            + E
Sbjct: 726 RLRE 729


>gi|169863176|ref|XP_001838210.1| hypothetical protein CC1G_07951 [Coprinopsis cinerea okayama7#130]
 gi|116500683|gb|EAU83578.1| hypothetical protein CC1G_07951 [Coprinopsis cinerea okayama7#130]
          Length = 1047

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 48/82 (58%)

Query: 40  LYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLI 99
           ++QIK     +     +D + +P Y +V++ PMDFGT+ +K+  G Y +LE+F  D  L+
Sbjct: 96  IHQIKKKDDYAFFLAPVDVKNVPGYLDVVKTPMDFGTMTDKVNRGRYRSLEEFADDFRLV 155

Query: 100 CSNAMQYNAPDTIYFRQARSIH 121
            +NA  +N P +IY  +A  I 
Sbjct: 156 TTNAKIFNPPGSIYHTEAERIE 177


>gi|410950660|ref|XP_003982021.1| PREDICTED: bromodomain-containing protein 4 [Felis catus]
          Length = 720

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 5/90 (5%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 387 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 446

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGRP 150
            ++ +  F  +      +EPE  VV    P
Sbjct: 447 QDVFEMRFAKM-----PDEPEEPVVAVSSP 471



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|84579095|dbj|BAE72981.1| hypothetical protein [Macaca fascicularis]
          Length = 617

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 283 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 342

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
            ++ +  F  +      +EPE  VV        PPTK    P
Sbjct: 343 QDVFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 379


>gi|345493074|ref|XP_001599557.2| PREDICTED: peregrin-like [Nasonia vitripennis]
          Length = 951

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 17/141 (12%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           EE+PDY +++ HPMD  T+  K+    Y ++  FE D  L+ +N + YN  DT+++R   
Sbjct: 574 EEVPDYLDIVTHPMDLSTMEAKIDRSEYDSISAFEADFNLMVNNCLAYNRKDTMFYRAGV 633

Query: 119 SIHELAKKNFENLRQD----SDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSD 174
            + E      E  R+D     +  EP+  V      P     K   R    R R+D    
Sbjct: 634 KMREQGGVLIEQARKDYPELDESEEPQQHV---NSTPAAGGAKSRKRDRSARVRND---- 686

Query: 175 VTLASGAENTALTNRDLGNGT 195
                 +E+ A   +D G G 
Sbjct: 687 ------SESKANNEKDTGGGA 701


>gi|444722826|gb|ELW63501.1| Peregrin [Tupaia chinensis]
          Length = 1505

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 666 DEVPDYLDHIKKPMDFLTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 725

Query: 119 SIHELAKKNFENLRQDSD 136
            + E         R+ ++
Sbjct: 726 RLREQGGAVLRQARRQAE 743


>gi|19920888|ref|NP_609148.1| CG7154 [Drosophila melanogaster]
 gi|7297294|gb|AAF52557.1| CG7154 [Drosophila melanogaster]
 gi|17862344|gb|AAL39649.1| LD22651p [Drosophila melanogaster]
 gi|220942380|gb|ACL83733.1| CG7154-PA [synthetic construct]
 gi|220952626|gb|ACL88856.1| CG7154-PA [synthetic construct]
          Length = 861

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I  PMDF T+R K+ +  Y  L +F  D  L+C NA++YN  DT+Y + A+ + 
Sbjct: 310 PGYSSIISRPMDFSTMRQKIDDHEYTALTEFTDDFKLMCENAIKYNHVDTVYNKAAKRLL 369

Query: 122 ELAKKNF--ENL 131
           ++  K+   ENL
Sbjct: 370 QVGMKHLQPENL 381


>gi|392559349|gb|EIW52533.1| hypothetical protein TRAVEDRAFT_135087 [Trametes versicolor
           FP-101664 SS1]
          Length = 821

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 9/116 (7%)

Query: 13  KRERRLFLVRIQQITTKGLSWNWDPQRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPM 72
           K  R L L  ++++ +K +S         QIK     +     +D  ++P Y +V+  PM
Sbjct: 55  KTPRPLKLKPLKEVLSKLIS---------QIKKKDDYAFFLHPVDLAQVPGYSDVVSRPM 105

Query: 73  DFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNF 128
           D GT+  K+  G Y +LE+F  D+ L+ +NA  +N P TIY  +A  I   A ++ 
Sbjct: 106 DLGTMSTKVDKGKYRSLEEFASDLRLVTTNAKTFNPPGTIYHTEADRIEAFALEHI 161


>gi|6016737|gb|AAF01563.1|AC009325_33 hypothetical protein [Arabidopsis thaliana]
 gi|6091741|gb|AAF03453.1|AC010797_29 hypothetical protein [Arabidopsis thaliana]
          Length = 601

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 46/75 (61%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY  +I+HPMD GTV++KL +G Y++  +F  DV L   NAM YN  D   +R A ++
Sbjct: 160 IPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADVRLTFRNAMTYNPSDNNVYRFADTL 219

Query: 121 HELAKKNFENLRQDS 135
            +  +  ++ + + S
Sbjct: 220 SKFFEVRWKTIEKKS 234


>gi|358366386|dbj|GAA83007.1| transcription regulator Bdf1 [Aspergillus kawachii IFO 4308]
          Length = 835

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 1/135 (0%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +P Y + I+ PMD GT+  KL N  Y T +    D  L+  NA+ +N PD +  ++ + +
Sbjct: 316 VPHYPQFIKRPMDLGTIEKKLKNNNYRTAQAVIDDFNLMVQNALTFNGPDHLVAQEGQKL 375

Query: 121 HELAKKNFENL-RQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERARSDFSSDVTLAS 179
                K   NL R D  + +   K V +     +   +P   PS  RA        T A 
Sbjct: 376 KITFDKQMANLPRADEVEEKKPKKSVAKPSTAVRRDHRPAPSPSTARATGASPQATTFAL 435

Query: 180 GAENTALTNRDLGNG 194
           G E   L  RD  N 
Sbjct: 436 GPEGLPLIRRDSANA 450



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 3/96 (3%)

Query: 40  LYQIKSYCCSSSIDFKMDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           L++ K Y  +      +DP  L  P Y  +I+ PMDF TV++KL  G Y   ++FE D+ 
Sbjct: 490 LHKPKHYTYAMPFYHPVDPVALNIPTYHSIIKKPMDFSTVQSKLRAGQYENAKEFELDMR 549

Query: 98  LICSNAMQYNAP-DTIYFRQARSIHELAKKNFENLR 132
           LI  N  ++N P D  Y    R   E  KK  +  R
Sbjct: 550 LILKNCFKFNIPGDPTYMAGQRLEEEFNKKWAQKTR 585


>gi|403270346|ref|XP_003927147.1| PREDICTED: peregrin isoform 1 [Saimiri boliviensis boliviensis]
          Length = 1214

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|330790698|ref|XP_003283433.1| hypothetical protein DICPUDRAFT_147079 [Dictyostelium purpureum]
 gi|325086698|gb|EGC40084.1| hypothetical protein DICPUDRAFT_147079 [Dictyostelium purpureum]
          Length = 529

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 43/76 (56%)

Query: 54  FKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
           + +  E+ PDY  VI+H MD  T++ KL +  Y    +F KD+ LI  NAM YN  D+  
Sbjct: 272 YPISKEDAPDYDSVIKHRMDLSTLKKKLDDNVYNNCSEFNKDLILIFKNAMNYNEEDSDI 331

Query: 114 FRQARSIHELAKKNFE 129
           +  A S+ + A+K  E
Sbjct: 332 YNAAISMRKAAEKEME 347


>gi|195577373|ref|XP_002078545.1| GD23488 [Drosophila simulans]
 gi|194190554|gb|EDX04130.1| GD23488 [Drosophila simulans]
          Length = 861

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I  PMDF T+R K+ +  Y  L +F  D  L+C NA++YN  DT+Y + A+ + 
Sbjct: 310 PGYSSIISRPMDFSTMRQKIDDHEYTALTEFTDDFKLMCENAIKYNHVDTVYNKAAKRLL 369

Query: 122 ELAKKNF--ENL 131
           ++  K+   ENL
Sbjct: 370 QVGMKHLQPENL 381


>gi|13699186|dbj|BAB41205.1| kinase-like protein [Oryza sativa (japonica cultivar-group)]
          Length = 714

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 2/70 (2%)

Query: 40  LYQIKSYCCSSSIDFKMDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           L ++ +  CS+  D  +D  +L  PDY ++I+ PMD GT+RNKL +G+Y +  +F  DV 
Sbjct: 175 LKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTSPSEFAADVR 234

Query: 98  LICSNAMQYN 107
           L  SNAM YN
Sbjct: 235 LTFSNAMTYN 244


>gi|224013616|ref|XP_002296472.1| hypothetical protein THAPSDRAFT_263817 [Thalassiosira pseudonana
           CCMP1335]
 gi|220968824|gb|EED87168.1| hypothetical protein THAPSDRAFT_263817 [Thalassiosira pseudonana
           CCMP1335]
          Length = 177

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 42/61 (68%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           EE PDY EVI+ PMD+GT+++KL  G Y + +  +KD  L+  N +Q+NA D+   ++AR
Sbjct: 117 EEFPDYYEVIKTPMDYGTMKDKLERGEYRSAQAMQKDFILVMQNCLQFNAKDSDIVKEAR 176

Query: 119 S 119
           +
Sbjct: 177 A 177


>gi|443710392|gb|ELU04645.1| hypothetical protein CAPTEDRAFT_155047 [Capitella teleta]
          Length = 1601

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 6/83 (7%)

Query: 60   ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
            ELPDY ++I  PMDF  ++N++ +  Y +L++ EKDV  +C NA +YN   ++ +  +  
Sbjct: 1425 ELPDYYDLIRRPMDFKKIQNRIVDHKYRSLDELEKDVMTLCKNAQEYNVEGSLIYEDSIV 1484

Query: 120  IHELAKKNFENLRQ--DSDDNEP 140
            +  +    F N+R+  + D N P
Sbjct: 1485 LQSV----FTNVRERLEKDGNLP 1503


>gi|426249198|ref|XP_004018337.1| PREDICTED: peregrin isoform 2 [Ovis aries]
          Length = 1213

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|296475104|tpg|DAA17219.1| TPA: bromodomain and PHD finger containing, 1-like isoform 2 [Bos
           taurus]
          Length = 1213

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|73984715|ref|XP_861729.1| PREDICTED: peregrin isoform 4 [Canis lupus familiaris]
          Length = 1214

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|395733472|ref|XP_002813517.2| PREDICTED: peregrin isoform 2 [Pongo abelii]
          Length = 1214

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|194862934|ref|XP_001970194.1| GG10496 [Drosophila erecta]
 gi|190662061|gb|EDV59253.1| GG10496 [Drosophila erecta]
          Length = 861

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I  PMDF T+R K+ +  Y  L +F  D  L+C NA++YN  DT+Y + A+ + 
Sbjct: 310 PGYSSIISKPMDFSTMRQKIDDHEYTALTEFTDDFKLMCENAIKYNHVDTVYNKAAKRLL 369

Query: 122 ELAKKNF--ENL 131
           ++  K+   ENL
Sbjct: 370 QVGMKHLQPENL 381


>gi|154420693|ref|XP_001583361.1| Bromodomain containing protein [Trichomonas vaginalis G3]
 gi|121917602|gb|EAY22375.1| Bromodomain containing protein [Trichomonas vaginalis G3]
          Length = 153

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 10/121 (8%)

Query: 48  CSSSIDFKMDPEE--LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQ 105
           C   ID  +DP++   PDY ++I+ PM    V+ KL N +Y+T++QF +DV LI SNA +
Sbjct: 24  CLPFIDL-VDPDKDGAPDYLQIIKEPMSLHEVQKKLKNNSYSTIDQFVRDVNLIWSNAKE 82

Query: 106 YNAPDTIYFRQARSIHELAKKNFE-NLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSL 164
           YN  DT++   A      AK  F+  ++Q S  N PE +  R+ +  T+   + L  P  
Sbjct: 83  YNGADTLFSHMAME----AKIWFDGKMKQFS--NTPEEEWTRKIQRTTQKLLEVLQHPPA 136

Query: 165 E 165
           E
Sbjct: 137 E 137


>gi|19584408|emb|CAD28495.1| hypothetical protein [Homo sapiens]
 gi|119584380|gb|EAW63976.1| bromodomain and PHD finger containing, 1, isoform CRA_e [Homo
           sapiens]
          Length = 1213

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|51173722|ref|NP_004625.2| peregrin isoform 2 [Homo sapiens]
 gi|426339317|ref|XP_004033597.1| PREDICTED: peregrin isoform 1 [Gorilla gorilla gorilla]
 gi|116241271|sp|P55201.2|BRPF1_HUMAN RecName: Full=Peregrin; AltName: Full=Bromodomain and PHD
           finger-containing protein 1; AltName: Full=Protein Br140
 gi|6630865|gb|AAF19605.1| putative 8-hydroxyguanine DNA glycosylase [Homo sapiens]
 gi|119584377|gb|EAW63973.1| bromodomain and PHD finger containing, 1, isoform CRA_b [Homo
           sapiens]
 gi|168275726|dbj|BAG10583.1| peregrin [synthetic construct]
          Length = 1214

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|350645185|emb|CCD60127.1| helicase, putative [Schistosoma mansoni]
          Length = 1582

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 38/56 (67%)

Query: 59   EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF 114
            +ELPDY EVI+ P+DF  +R ++ +G Y ++++ E D+ L+C NA  YN   ++ F
Sbjct: 1295 KELPDYYEVIKKPVDFNRIRQRVKDGKYRSVDELEADILLLCKNAQTYNMDGSLIF 1350


>gi|307185016|gb|EFN71245.1| Peregrin [Camponotus floridanus]
          Length = 898

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++ +E+PDY E++ HPMD  T++ KL    Y ++  FE D  L+ +N + YN  DT+++R
Sbjct: 551 VNTKEVPDYLEIVSHPMDLSTMQAKLEKQEYDSITAFETDFNLMVNNCLAYNRKDTMFYR 610

Query: 116 QARSIHELAKKNFENLRQDSDDNEP 140
               + E      +  R+D  + +P
Sbjct: 611 AGVKMKEQGGALIDQARKDYPELDP 635


>gi|301779339|ref|XP_002925081.1| PREDICTED: peregrin-like isoform 2 [Ailuropoda melanoleuca]
          Length = 1214

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|383421479|gb|AFH33953.1| peregrin isoform 2 [Macaca mulatta]
          Length = 1213

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|348556652|ref|XP_003464135.1| PREDICTED: peregrin-like isoform 1 [Cavia porcellus]
          Length = 1213

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|296225798|ref|XP_002758654.1| PREDICTED: peregrin isoform 2 [Callithrix jacchus]
          Length = 1214

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|291412486|ref|XP_002722502.1| PREDICTED: bromodomain and PHD finger-containing protein 1 isoform
           3 [Oryctolagus cuniculus]
          Length = 1245

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHELAKKNFENLRQDSD 136
           + E         R+ ++
Sbjct: 721 LREQGGAVLRQARRQAE 737


>gi|256083283|ref|XP_002577876.1| helicase [Schistosoma mansoni]
          Length = 1436

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 38/56 (67%)

Query: 59   EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF 114
            +ELPDY EVI+ P+DF  +R ++ +G Y ++++ E D+ L+C NA  YN   ++ F
Sbjct: 1295 KELPDYYEVIKKPVDFNRIRQRVKDGKYRSVDELEADILLLCKNAQTYNMDGSLIF 1350


>gi|195339001|ref|XP_002036110.1| GM16565 [Drosophila sechellia]
 gi|194129990|gb|EDW52033.1| GM16565 [Drosophila sechellia]
          Length = 861

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I  PMDF T+R K+ +  Y  L +F  D  L+C NA++YN  DT+Y + A+ + 
Sbjct: 310 PGYSSIISRPMDFSTMRQKIDDHEYTALTEFTDDFKLMCENAIKYNHVDTVYNKAAKRLL 369

Query: 122 ELAKKNF--ENL 131
           ++  K+   ENL
Sbjct: 370 QVGMKHLQPENL 381


>gi|109034690|ref|XP_001094152.1| PREDICTED: peregrin isoform 4 [Macaca mulatta]
          Length = 1214

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|190352|gb|AAB02119.1| Br140 [Homo sapiens]
          Length = 1214

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|397486337|ref|XP_003814286.1| PREDICTED: peregrin isoform 1 [Pan paniscus]
 gi|410209968|gb|JAA02203.1| bromodomain and PHD finger containing, 1 [Pan troglodytes]
 gi|410266264|gb|JAA21098.1| bromodomain and PHD finger containing, 1 [Pan troglodytes]
 gi|410292246|gb|JAA24723.1| bromodomain and PHD finger containing, 1 [Pan troglodytes]
 gi|410335057|gb|JAA36475.1| bromodomain and PHD finger containing, 1 [Pan troglodytes]
          Length = 1214

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|410951644|ref|XP_003982503.1| PREDICTED: peregrin isoform 1 [Felis catus]
          Length = 1214

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|402859458|ref|XP_003894176.1| PREDICTED: peregrin isoform 1 [Papio anubis]
          Length = 1214

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|344276041|ref|XP_003409818.1| PREDICTED: peregrin isoform 2 [Loxodonta africana]
          Length = 1220

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 667 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 726

Query: 120 IHE 122
           + E
Sbjct: 727 LRE 729


>gi|332231617|ref|XP_003264990.1| PREDICTED: peregrin isoform 1 [Nomascus leucogenys]
          Length = 1214

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|344276039|ref|XP_003409817.1| PREDICTED: peregrin isoform 1 [Loxodonta africana]
          Length = 1214

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|300797262|ref|NP_001178501.1| peregrin [Rattus norvegicus]
          Length = 1246

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 660 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 719

Query: 120 IHELAKKNFENLRQDSD 136
           + E         R+ ++
Sbjct: 720 LREQGGAVLRQARRQAE 736


>gi|350591398|ref|XP_001928420.3| PREDICTED: peregrin isoform 2 [Sus scrofa]
          Length = 1214

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|390347188|ref|XP_790486.3| PREDICTED: ATPase family AAA domain-containing protein 2-like
            [Strongylocentrotus purpuratus]
          Length = 1475

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DPEE+PDY EVI+ PMD  T+ NK+    Y + +QF  D+ LI SNA++YN PD
Sbjct: 1040 VDPEEVPDYVEVIKQPMDLFTMNNKINLHQYTSAKQFLGDIDLITSNALEYN-PD 1093


>gi|149036900|gb|EDL91518.1| rCG56048 [Rattus norvegicus]
          Length = 1212

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 660 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 719

Query: 120 IHE 122
           + E
Sbjct: 720 LRE 722


>gi|148667032|gb|EDK99448.1| bromodomain and PHD finger containing, 1 [Mus musculus]
 gi|187952873|gb|AAI38362.1| Brpf1 protein [Mus musculus]
          Length = 1212

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 660 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 719

Query: 120 IHE 122
           + E
Sbjct: 720 LRE 722


>gi|119584378|gb|EAW63974.1| bromodomain and PHD finger containing, 1, isoform CRA_c [Homo
           sapiens]
          Length = 1247

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHELAKKNFENLRQDSD 136
           + E         R+ ++
Sbjct: 721 LREQGGAVLRQARRQAE 737


>gi|403270350|ref|XP_003927149.1| PREDICTED: peregrin isoform 3 [Saimiri boliviensis boliviensis]
          Length = 1119

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|332231621|ref|XP_003264992.1| PREDICTED: peregrin isoform 3 [Nomascus leucogenys]
          Length = 1119

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|291412484|ref|XP_002722501.1| PREDICTED: bromodomain and PHD finger-containing protein 1 isoform
           2 [Oryctolagus cuniculus]
          Length = 1213

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHELAKKNFENLRQDSD 136
           + E         R+ ++
Sbjct: 721 LREQGGAVLRQARRQAE 737


>gi|338714466|ref|XP_003363085.1| PREDICTED: peregrin isoform 2 [Equus caballus]
          Length = 1214

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|30794210|ref|NP_084454.1| peregrin [Mus musculus]
 gi|28277047|gb|AAH46521.1| Bromodomain and PHD finger containing, 1 [Mus musculus]
          Length = 1246

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 660 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 719

Query: 120 IHE 122
           + E
Sbjct: 720 LRE 722


>gi|385199181|gb|AFI44969.1| bromodomain and PHD finger-containing protein, partial [Trichomyia
           sp. nov. 1 Thailand]
          Length = 828

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  E+PDY ++++HPMD   +R KL +  Y  L+  E D  L+  N + YN  DT ++R
Sbjct: 327 VDLNEVPDYMDIVKHPMDLSLIRTKLQSKMYYNLDDMEADFDLMIWNCLAYNKKDTYFYR 386

Query: 116 QARSIHELAKKNFENLRQD 134
               + +     F+ +R+D
Sbjct: 387 AGVRMRDQGGLLFKAMRKD 405


>gi|18395937|ref|NP_566151.1| bromodomain and extraterminal domain protein 10 [Arabidopsis
           thaliana]
 gi|75163747|sp|Q93ZB7.1|GTE11_ARATH RecName: Full=Transcription factor GTE11; AltName: Full=BROMODOMAIN
           AND EXTRATERMINAL DOMAIN PROTEIN 10; Short=AtBET10;
           AltName: Full=Bromodomain-containing protein GTE11;
           AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
           E11
 gi|16323117|gb|AAL15293.1| AT3g01770/F28J7_10 [Arabidopsis thaliana]
 gi|20466526|gb|AAM20580.1| unknown protein [Arabidopsis thaliana]
 gi|22136456|gb|AAM91306.1| unknown protein [Arabidopsis thaliana]
 gi|332640191|gb|AEE73712.1| bromodomain and extraterminal domain protein 10 [Arabidopsis
           thaliana]
          Length = 620

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 46/75 (61%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY  +I+HPMD GTV++KL +G Y++  +F  DV L   NAM YN  D   +R A ++
Sbjct: 160 IPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADVRLTFRNAMTYNPSDNNVYRFADTL 219

Query: 121 HELAKKNFENLRQDS 135
            +  +  ++ + + S
Sbjct: 220 SKFFEVRWKTIEKKS 234


>gi|74224125|dbj|BAE33691.1| unnamed protein product [Mus musculus]
          Length = 1247

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 660 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 719

Query: 120 IHE 122
           + E
Sbjct: 720 LRE 722


>gi|224046694|ref|XP_002199414.1| PREDICTED: ATPase family AAA domain-containing protein 2
           [Taeniopygia guttata]
          Length = 1293

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 36/52 (69%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYN 107
           +DPEE+PDY  VI+ PMD  TV +K+    Y T   F KD+ LICSNA++YN
Sbjct: 934 VDPEEVPDYNTVIKQPMDLSTVLSKIDMHQYPTARDFLKDIDLICSNALEYN 985


>gi|402859462|ref|XP_003894178.1| PREDICTED: peregrin isoform 3 [Papio anubis]
          Length = 1119

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|426339321|ref|XP_004033599.1| PREDICTED: peregrin isoform 3 [Gorilla gorilla gorilla]
          Length = 1119

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|297670744|ref|XP_002813518.1| PREDICTED: peregrin isoform 3 [Pongo abelii]
          Length = 1119

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|297285317|ref|XP_002802755.1| PREDICTED: peregrin [Macaca mulatta]
          Length = 1119

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|296225800|ref|XP_002758655.1| PREDICTED: peregrin isoform 3 [Callithrix jacchus]
          Length = 1119

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|194375826|dbj|BAG57257.1| unnamed protein product [Homo sapiens]
          Length = 1119

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|281207665|gb|EFA81845.1| bromodomain-containing protein [Polysphondylium pallidum PN500]
          Length = 536

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 1/93 (1%)

Query: 38  QRLYQ-IKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDV 96
           Q++++ + S+  +S   + +  +E PDY E I+H MD  T++  L +G Y+   +F  D+
Sbjct: 305 QKVWKALNSHRYASIFRYPITHDEAPDYDEYIKHRMDLTTLKKNLDDGLYSNSSEFNGDL 364

Query: 97  FLICSNAMQYNAPDTIYFRQARSIHELAKKNFE 129
            LI SNAM+YNAP++  +  A S+ +   K  +
Sbjct: 365 QLIFSNAMEYNAPNSEIYNYAVSMKKYTDKEMD 397


>gi|148236765|ref|NP_001086274.1| bromodomain-containing protein 9 [Xenopus laevis]
 gi|82183894|sp|Q6GLP7.1|BRD9_XENLA RecName: Full=Bromodomain-containing protein 9
 gi|49256462|gb|AAH74412.1| MGC84428 protein [Xenopus laevis]
          Length = 527

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 41/59 (69%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I++PMDF T++ K++   Y ++ +F+ D  L+C NAM YN P+T+Y++ A+ +
Sbjct: 113 PGYFMIIKNPMDFSTMKEKISQDEYKSVTEFKADFKLMCDNAMTYNRPETVYYKLAKKL 171


>gi|397486341|ref|XP_003814288.1| PREDICTED: peregrin isoform 3 [Pan paniscus]
          Length = 1119

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720

Query: 120 IHE 122
           + E
Sbjct: 721 LRE 723


>gi|326666660|ref|XP_698063.4| PREDICTED: bromodomain-containing protein 1 [Danio rerio]
          Length = 1142

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 42/76 (55%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + + HPMDF T+  ++    Y  L++FE D  LI  N M+YN  DT ++R A 
Sbjct: 573 KEVPDYMDHVLHPMDFSTMSKRIEAQGYKYLDEFEADFNLITDNCMKYNGKDTFFYRAAV 632

Query: 119 SIHELAKKNFENLRQD 134
            + +         R+D
Sbjct: 633 KLRDQGGAILRKTRRD 648


>gi|167515986|ref|XP_001742334.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778958|gb|EDQ92572.1| predicted protein [Monosiga brevicollis MX1]
          Length = 497

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 38/63 (60%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY +VI+ PMD GTVR KL  G Y T + F  DV L+ +N   YN P +   + A+S 
Sbjct: 280 IPDYYDVIKQPMDLGTVRTKLEEGEYETRDDFAHDVRLVFANCYTYNPPGSDVVKMAKST 339

Query: 121 HEL 123
            E+
Sbjct: 340 SEV 342



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 35/68 (51%)

Query: 64  YCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHEL 123
           Y E+I +PMD GT+RNKL    Y +  +   D+ L+  N   +N P    +  ++++   
Sbjct: 120 YPEIIANPMDLGTIRNKLRKKEYFSGRECLDDIELVWHNCQTFNRPSDDVYIMSQALESD 179

Query: 124 AKKNFENL 131
            K+   NL
Sbjct: 180 YKQMLANL 187


>gi|145353027|ref|XP_001420833.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581068|gb|ABO99126.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 904

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 6/82 (7%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAY--ATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           E+PDY EVI++PMD GT++ ++  G Y    +E +  DV L+ SNAM YN  DT  F+ A
Sbjct: 443 EIPDYFEVIKNPMDLGTIKERIDAGYYDEKNVEAYAADVRLVWSNAMTYNKDDTPVFKMA 502

Query: 118 RSIHELAKKNFENLRQDSDDNE 139
           R    +  + FE   Q   ++E
Sbjct: 503 R----IMSREFEYQWQTRIEDE 520


>gi|407042940|gb|EKE41627.1| bromodomain containing protein [Entamoeba nuttalli P19]
          Length = 315

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 29/137 (21%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           ++P Y  VI+ PMD GT+++ L++  Y T E+F+ D+ L+  NA+ +N PD+  +  A  
Sbjct: 56  QVPTYFSVIKRPMDLGTIKHNLSDKKYITKEEFQADMLLVFDNALLFNHPDSEVYHWAVK 115

Query: 120 IHELAKKNFENLRQDS-----------------------DDNEPETKVVRRGRPPT--KN 154
           +    KK FE L +++                       ++ +PE    ++ R  +  KN
Sbjct: 116 L----KKQFETLWKNAFKEKKPVDTKTNVTSHNETLNKVEEKKPEVSNSKKTRASSRKKN 171

Query: 155 FKKPLGRPSLERARSDF 171
             KPL +  + + RSD 
Sbjct: 172 TNKPLTKEEMIKLRSDL 188


>gi|307213342|gb|EFN88794.1| Homeotic protein female sterile [Harpegnathos saltator]
          Length = 1514

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 42/71 (59%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+ PMD GTV++K+ N  Y T ++F  DV LI +N  +YN PD      AR +
Sbjct: 435 LHDYHEIIKKPMDLGTVKSKMDNREYKTAQEFASDVRLIFTNCYKYNPPDHDVVSMARKL 494

Query: 121 HELAKKNFENL 131
            ++ +  +  +
Sbjct: 495 QDIFEMRYAKI 505



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           LPDY ++IE PMD GT++ +L N  Y + ++  +D   + +N   YN P  D +   QA
Sbjct: 94  LPDYHKIIERPMDLGTIKKRLENTYYWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQA 152


>gi|183232851|ref|XP_651394.2| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
 gi|169801846|gb|EAL46008.2| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
 gi|449707679|gb|EMD47300.1| bromo domain containing protein [Entamoeba histolytica KU27]
          Length = 315

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 29/137 (21%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           ++P Y  VI+ PMD GT+++ L++  Y T E+F+ D+ L+  NA+ +N PD+  +  A  
Sbjct: 56  QVPTYFSVIKRPMDLGTIKHNLSDKKYITKEEFQADMLLVFDNALLFNHPDSEVYHWAVK 115

Query: 120 IHELAKKNFENLRQDS-----------------------DDNEPETKVVRRGRPPT--KN 154
           +    KK FE L +++                       ++ +PE    ++ R  +  KN
Sbjct: 116 L----KKQFETLWKNAFKEKKPVDTKTNVTSHNDTLNKVEEKKPEVSNSKKTRASSRKKN 171

Query: 155 FKKPLGRPSLERARSDF 171
             KPL +  + + RSD 
Sbjct: 172 TNKPLTKEEMIKLRSDL 188


>gi|356560521|ref|XP_003548540.1| PREDICTED: transcription factor GTE8-like [Glycine max]
          Length = 740

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 15/126 (11%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           +LPDY  +I+HPMD GTV++K+A G YA   +F  DV L  SNAM YN         A +
Sbjct: 207 KLPDYFSIIKHPMDLGTVKSKIAAGEYAGPIEFADDVRLTFSNAMIYNPRGNDVHVMADT 266

Query: 120 I---HELAKKNFENLRQDSDD----NEPETKVVRRGR--PPTKNFK------KPLGRPSL 164
           +    EL  K  E      DD    ++P+T V++  R  PP+K  K      +P+  P  
Sbjct: 267 LSKYFELRWKAIEKKLPRRDDVPFPSKPDTYVIKTTRPMPPSKKRKISTLPCQPVVMPPA 326

Query: 165 ERARSD 170
           ++  SD
Sbjct: 327 KKVMSD 332


>gi|345489407|ref|XP_001604290.2| PREDICTED: bromodomain adjacent to zinc finger domain protein 1A-like
            isoform 1 [Nasonia vitripennis]
          Length = 1443

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 3/99 (3%)

Query: 59   EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
            +E+PDY + I HPMDFGT++ K  N  Y TL++F  D  L+  N   YN   +  ++   
Sbjct: 1327 DEVPDYHDYISHPMDFGTIKTKFENDEYRTLQEFYSDCLLVFDNCQTYNTEHSEVYKAGM 1386

Query: 119  SIHELAKKNFENLRQDSDDN---EPETKVVRRGRPPTKN 154
             + +  +K  ++L  + +++   +P+ K+ +  R   +N
Sbjct: 1387 RLMKFFEKKCKDLNLNYNEDAVRQPQVKIQKVQRNGDQN 1425


>gi|395334726|gb|EJF67102.1| hypothetical protein DICSQDRAFT_158655 [Dichomitus squalens LYAD-421
            SS1]
          Length = 1880

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 41/67 (61%)

Query: 62   PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
            P Y + I+ PMDFGT+  KLA G YAT+E F KDV L+ +N   +N P T     A ++ 
Sbjct: 1671 PTYYDEIKEPMDFGTMHTKLAEGKYATMEDFAKDVGLVFNNCRTFNPPTTYPVNCADALE 1730

Query: 122  ELAKKNF 128
            +L KK +
Sbjct: 1731 KLFKKEW 1737



 Score = 42.0 bits (97), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 31/62 (50%)

Query: 62   PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
            P+Y ++I+ PMD  T+  KL  G Y     FE D  L+ +NA  YN   +    +A ++ 
Sbjct: 1278 PNYFDIIKSPMDLSTMGAKLEQGQYKDRFAFEADFRLMINNAKTYNVAGSFVHAEAVALE 1337

Query: 122  EL 123
              
Sbjct: 1338 SF 1339


>gi|432109400|gb|ELK33657.1| Bromodomain-containing protein 4 [Myotis davidii]
          Length = 1183

 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 386 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 445

Query: 123 LAKKNFENLRQDSDDNEPETKVV 145
           + +  F  +      +EPE  +V
Sbjct: 446 VFEMRFAKM-----PDEPEEPMV 463



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|348538983|ref|XP_003456969.1| PREDICTED: hypothetical protein LOC100693386 [Oreochromis
           niloticus]
          Length = 1432

 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 41/74 (55%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+HPMD  T++ KL N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 468 LHDYHEIIKHPMDLSTIKKKLDNRQYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 527

Query: 121 HELAKKNFENLRQD 134
            ++ +  F  +  D
Sbjct: 528 QDVFEMRFAKMPDD 541



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 113 LPDYYKIIKSPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 172

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGR 149
            +L  +    + Q+    E E  VV +GR
Sbjct: 173 EKLFLQKITEMPQE----ETEIAVVTKGR 197


>gi|255540327|ref|XP_002511228.1| bromodomain-containing protein, putative [Ricinus communis]
 gi|223550343|gb|EEF51830.1| bromodomain-containing protein, putative [Ricinus communis]
          Length = 759

 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP-DTIYF 114
           +PDY  VI+HPMD GTV++K+  GAY++   F  DV L  SNAM+YN P + ++F
Sbjct: 238 IPDYFTVIKHPMDLGTVKSKITTGAYSSPLAFAADVRLTFSNAMKYNPPGNDVHF 292


>gi|319411571|emb|CBQ73615.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
          Length = 1032

 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 46/75 (61%)

Query: 57  DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQ 116
           D +E PDY E+I+ PM    +++KL   +YA+L   + D   IC+NA +YN  DT  + +
Sbjct: 100 DAQEYPDYYEIIKRPMALEQIQSKLDQRSYASLPDVKHDFETICNNAKRYNLRDTPVWLK 159

Query: 117 ARSIHELAKKNFENL 131
           AR +H L K ++ ++
Sbjct: 160 ARELHSLVKISYVHI 174


>gi|449455878|ref|XP_004145677.1| PREDICTED: transcription factor GTE8-like [Cucumis sativus]
          Length = 750

 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 36/49 (73%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
           LPDY  +I+HPMD GTV++KL++GAY++   F  DV L  SNAM YN P
Sbjct: 216 LPDYFTIIKHPMDLGTVKSKLSSGAYSSPLDFLADVRLTFSNAMTYNPP 264


>gi|340931901|gb|EGS19434.1| hypothetical protein CTHT_0048940 [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 983

 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 17/109 (15%)

Query: 38  QRLYQIKSYCCSSSIDFKMDPEE---------------LPDYCEVIEHPMDFGTVRNKLA 82
           Q + +   Y C  +I  K+D EE               LPDY EVI+ PM F T+R K+ 
Sbjct: 118 QLIRETSEYLCRYTI--KIDGEEHEIASGFQRLVSKRSLPDYFEVIKEPMAFSTIRAKIG 175

Query: 83  NGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENL 131
              Y    +F  DV  IC NA  YN P    F  A  + E+ K+  + L
Sbjct: 176 KKTYQKFSEFVHDVTRICHNAQVYNRPSAPIFADAAKLLEVFKEKLDEL 224


>gi|345489409|ref|XP_003426132.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 1A-like
            isoform 2 [Nasonia vitripennis]
          Length = 1407

 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 3/99 (3%)

Query: 59   EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
            +E+PDY + I HPMDFGT++ K  N  Y TL++F  D  L+  N   YN   +  ++   
Sbjct: 1291 DEVPDYHDYISHPMDFGTIKTKFENDEYRTLQEFYSDCLLVFDNCQTYNTEHSEVYKAGM 1350

Query: 119  SIHELAKKNFENLRQDSDDN---EPETKVVRRGRPPTKN 154
             + +  +K  ++L  + +++   +P+ K+ +  R   +N
Sbjct: 1351 RLMKFFEKKCKDLNLNYNEDAVRQPQVKIQKVQRNGDQN 1389


>gi|348552081|ref|XP_003461857.1| PREDICTED: bromodomain-containing protein 4-like [Cavia porcellus]
          Length = 1373

 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 44/75 (58%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDD 137
           + +  F  +  + ++
Sbjct: 449 VFEMRFAKMPDEPEE 463



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|326936210|ref|XP_003214150.1| PREDICTED: bromodomain-containing protein 4-like, partial
           [Meleagris gallopavo]
          Length = 697

 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL N  Y   ++F  DV L+ SN  +YN  D      AR +
Sbjct: 310 LHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKL 369

Query: 121 HELAKKNFENLRQDSDDNEPETKVV 145
            ++ +  F  +      +EPE  V+
Sbjct: 370 QDVFEMRFAKM-----PDEPEEPVI 389



 Score = 46.6 bits (109), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HELAKKNFENLRQDSDDNEPETKVV 145
            +L       L++ S+  + ET++V
Sbjct: 154 EKLF------LQKISEMTQEETEIV 172


>gi|321262278|ref|XP_003195858.1| hypothetical protein CGB_H4570C [Cryptococcus gattii WM276]
 gi|317462332|gb|ADV24071.1| conserved hypothetical protein [Cryptococcus gattii WM276]
          Length = 683

 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 44/73 (60%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           + PDY  VI+ PMD  T++ ++  G    +++ E+DV L+ SNAM YNA D+  +  A+ 
Sbjct: 601 DAPDYYSVIKRPMDLKTIKGRIKEGRIERIDELERDVLLMFSNAMMYNASDSQVYEMAKE 660

Query: 120 IHELAKKNFENLR 132
           + +  + +F + R
Sbjct: 661 MMKDCEGHFAHFR 673


>gi|299472993|emb|CBN77394.1| Zinc finger, TAZ-type [Ectocarpus siliculosus]
          Length = 1359

 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 7/71 (9%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLAN---GAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           LPDY E+I HPMD GTV  KLA    G Y   E+F  DV L+  NAM+YN P++  +   
Sbjct: 446 LPDYFEIITHPMDLGTVARKLAKEGAGGYLEHEEFAADVQLVFDNAMKYNGPESEVY--- 502

Query: 118 RSIHELAKKNF 128
             + E  KK F
Sbjct: 503 -PVAERMKKEF 512


>gi|159491100|ref|XP_001703511.1| Ring3 protein [Chlamydomonas reinhardtii]
 gi|158280435|gb|EDP06193.1| Ring3 protein [Chlamydomonas reinhardtii]
          Length = 429

 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 12/105 (11%)

Query: 39  RLYQIKSYCCSSSIDFKM------------DPEELPDYCEVIEHPMDFGTVRNKLANGAY 86
           RL +I    CS ++   M            D     DY +V+  PMDF TVRN+   G Y
Sbjct: 84  RLVEIVQKHCSQALKAIMQHKWAFPFNTPVDTSRFVDYLKVVATPMDFSTVRNRTEAGYY 143

Query: 87  ATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENL 131
              + +  DV L+ SNA +YNAP +     A+++ E++++ +E L
Sbjct: 144 RDPKDWWSDVMLVFSNAKRYNAPGSDCHLMAQTLQEVSEEKYEKL 188


>gi|449492943|ref|XP_004159148.1| PREDICTED: transcription factor GTE9-like [Cucumis sativus]
          Length = 491

 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 36/49 (73%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
           LPDY  +I+HPMD GTV++KL++GAY++   F  DV L  SNAM YN P
Sbjct: 167 LPDYFTIIKHPMDLGTVKSKLSSGAYSSPLDFLADVRLTFSNAMTYNPP 215


>gi|443897138|dbj|GAC74480.1| hypothetical protein PANT_11d00076 [Pseudozyma antarctica T-34]
          Length = 700

 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 16/135 (11%)

Query: 15  ERRLFLVRIQQITTKGLSWNWDPQRLYQIKSYC-CSSSIDFKMDPEELPDYCEVIEHPMD 73
           ER  FL  I +I T             ++K+Y   S++   K+   + PDY +VI+HPMD
Sbjct: 35  EREEFLESIDRIIT-------------ELKNYTEHSTAFLSKVSKRDAPDYYDVIKHPMD 81

Query: 74  FGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQ 133
            G+++ K+ +G Y T +QF  D+ LI  N + YN+  T   R  R++  + KK    L  
Sbjct: 82  LGSMQKKVKSGQYKTKKQFAHDLNLIWDNCLLYNSDPTHPLR--RNVQFMRKKADHLLEF 139

Query: 134 DSDDNEPETKVVRRG 148
            SD ++ ++ +V+ G
Sbjct: 140 ISDKSDVKSALVQWG 154


>gi|344250082|gb|EGW06186.1| Peregrin [Cricetulus griseus]
          Length = 771

 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 41/64 (64%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A 
Sbjct: 665 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAV 724

Query: 119 SIHE 122
            + E
Sbjct: 725 RLRE 728


>gi|392585789|gb|EIW75127.1| hypothetical protein CONPUDRAFT_159263 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 1292

 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 1   MQSVVDLAVLTVKRE--RRLFLVRIQQITTKGLSWNWDPQR--LYQIKSYCCSSSIDFKM 56
           ++ V  LA LT KRE  +R+    IQ++    L  +  P R    +I +Y         +
Sbjct: 355 LERVQQLAELTRKRESRKRIQTDSIQKVVEVALLAHEAPLRYAFERILAYDRQDLFKHPV 414

Query: 57  DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQ 116
              E+PDY EVI+ PM +  +  KL    Y  L+ F+ DV L+ +NA  YN P + +++ 
Sbjct: 415 SSTEVPDYHEVIKKPMSWDDISAKLDRHEYWDLQNFKDDVQLVLTNATSYNQPGSPFYKA 474

Query: 117 ARSIH 121
           A+ I 
Sbjct: 475 AQRIQ 479


>gi|339246221|ref|XP_003374744.1| domain protein, SNF2 family [Trichinella spiralis]
 gi|316972001|gb|EFV55707.1| domain protein, SNF2 family [Trichinella spiralis]
          Length = 1787

 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 4/76 (5%)

Query: 60   ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
            ELPDY E+I  P+DF  +R KL +G Y  LE+ +KDV L+C NA  YN   +  +  + +
Sbjct: 1544 ELPDYYELIAIPVDFKKIRKKLTDGRYKNLEELDKDVQLLCDNAQTYNLEGSEIYEDSVA 1603

Query: 120  IHELAKKNFENLRQDS 135
            +  L    + NLR+ +
Sbjct: 1604 LRNL----WNNLREQA 1615


>gi|297828570|ref|XP_002882167.1| ATBET10 [Arabidopsis lyrata subsp. lyrata]
 gi|297328007|gb|EFH58426.1| ATBET10 [Arabidopsis lyrata subsp. lyrata]
          Length = 622

 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 39/60 (65%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY  +I+HPMD GTV++KL +G Y++  +F  DV L   NAM YN  D   +R A ++
Sbjct: 157 IPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADVRLTFRNAMTYNPSDNNVYRFADTL 216


>gi|395862390|ref|XP_003803436.1| PREDICTED: uncharacterized protein LOC100943955 [Otolemur
           garnettii]
          Length = 476

 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)

Query: 48  CSSSIDFKMDPEEL----------PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           C S   F+ DP               Y  +I+  MDFGT+R+K+    Y  + +FE D  
Sbjct: 148 CKSLFAFREDPHGFFAFPVMDTIALGYSMIIKQQMDFGTMRDKIVANEYKQVTEFEADFK 207

Query: 98  LICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQD 134
            +  NA+ YN PDT+Y++QA+ I     K    L +D
Sbjct: 208 PMSDNAVTYNRPDTVYYKQAKKIFHAGFKMMSKLFRD 244


>gi|389743542|gb|EIM84726.1| hypothetical protein STEHIDRAFT_169639 [Stereum hirsutum FP-91666
           SS1]
          Length = 1280

 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++P+ +P Y + I HPMDFGT+  K+  G Y +L++F +D  L   NA  +N P T+Y  
Sbjct: 138 VNPDLVPGYRDAIAHPMDFGTMGVKVERGRYRSLDEFSQDFNLTLQNAKTFNPPGTLYHS 197

Query: 116 QARSIHELAKKNFENLRQDSDDNEPETKV 144
           +A  I     +     R    + E E +V
Sbjct: 198 EAERIGAWGNEAISRARGTVIEFETEWEV 226


>gi|452825382|gb|EME32379.1| GATA transcription factor areB gamma-like protein [Galdieria
           sulphuraria]
          Length = 545

 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 46/76 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D   + DY +VI+ PMD GTV+ KL   +YA+ E+  +DV LI  N   YN P+T +++
Sbjct: 52  VDTTYVTDYLDVIKQPMDLGTVQAKLEAYSYASFEELWQDVDLIWKNCCTYNGPNTQFYQ 111

Query: 116 QARSIHELAKKNFENL 131
            A  + + + + F +L
Sbjct: 112 CALKLQKFSNRVFSDL 127


>gi|63054449|ref|NP_588301.2| Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces pombe
           972h-]
 gi|46397302|sp|Q9Y7N0.1|BDF1_SCHPO RecName: Full=SWR1 complex bromodomain subunit bdf1
 gi|157310522|emb|CAB41059.2| Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces pombe]
          Length = 578

 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 42/70 (60%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           + PDY +VI+ PMD  T+++KL    Y+TLE+FE D+ L+ +N   YN P T      R 
Sbjct: 289 DCPDYFDVIKEPMDLSTIQSKLNKNEYSTLEEFESDILLMFNNCFTYNPPGTPVHVMGRQ 348

Query: 120 IHELAKKNFE 129
           +  + K+ +E
Sbjct: 349 LENVFKEKWE 358



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 11/121 (9%)

Query: 37  PQRLY------QIKSYCCSSSIDFKMDP--EELPDYCEVIEHPMDFGTVRNKLANGAYAT 88
           PQ+ Y      Q+K    S+     +DP  + +PDY  ++++PMD GT+  KL +  Y+ 
Sbjct: 88  PQQKYCLAIVRQLKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSV 147

Query: 89  LEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRG 148
            ++F  D+ L+ SN   YN  ++      +++ E+ ++    L+Q  D  +P    V++ 
Sbjct: 148 PQEFIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFER---QLKQLPDAEQPAAAPVKKS 204

Query: 149 R 149
           +
Sbjct: 205 K 205


>gi|346976851|gb|EGY20303.1| chromatin structure-remodeling complex protein RSC1 [Verticillium
           dahliae VdLs.17]
          Length = 1054

 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 40/71 (56%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++IE P  F ++R K+    Y +  +F +D+ LIC NA  YN P    F  A  +
Sbjct: 125 LPDYFQIIEEPTAFSSIRKKVQKKEYTSASEFVRDLALICHNAQVYNLPSAPIFHAAVRL 184

Query: 121 HELAKKNFENL 131
            E+AK+  + L
Sbjct: 185 REVAKQKLQKL 195



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 7/99 (7%)

Query: 57  DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF-- 114
           D +ELP+Y + I+ P+    +R K     YAT++   +D+ L+  NA  +N  D+     
Sbjct: 314 DKQELPEYYDAIQKPIALDMIRQKFKRKKYATVDDLIQDLDLMFENAKLFNEDDSDIHQT 373

Query: 115 -----RQARSIHELAKKNFENLRQDSDDNEPETKVVRRG 148
                R+ARS+ +  K   ++L +  D   P  +V   G
Sbjct: 374 AIDLQREARSLAQQEKAKPDSLCRADDGRLPLAEVQHNG 412


>gi|5031520|gb|AAD38202.1|AF155929_1 histone acetyltransferase GCN5 [Toxoplasma gondii]
          Length = 473

 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 2/85 (2%)

Query: 49  SSSIDFK--MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQY 106
           SSS  F+  +   E PDY EV+  P+D  T++ +  NG Y T E F++D+ L+  N   Y
Sbjct: 386 SSSWPFRRPVSVSEAPDYYEVVRRPIDISTMKKRNRNGDYRTKEAFQEDLLLMFDNCRVY 445

Query: 107 NAPDTIYFRQARSIHELAKKNFENL 131
           N+PDTIY++ A  +        E L
Sbjct: 446 NSPDTIYYKYADELQAFIWPKVEAL 470


>gi|298705309|emb|CBJ48999.1| trithorax 3 [Ectocarpus siliculosus]
          Length = 2249

 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 43/69 (62%)

Query: 58   PEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
            P+ +  Y E IEHP+DF T+R +     Y ++ +   DV L+C+NA  +N P TIY ++A
Sbjct: 1760 PDGVEGYAEAIEHPIDFSTIRRRSQWELYGSIHELALDVQLLCANARTFNGPGTIYHKEA 1819

Query: 118  RSIHELAKK 126
             ++ + A++
Sbjct: 1820 TNVLKGAER 1828


>gi|19115719|ref|NP_594807.1| SAGA complex histone acetyltransferase catalytic subunit Gcn5
           [Schizosaccharomyces pombe 972h-]
 gi|59799535|sp|Q9UUK2.1|GCN5_SCHPO RecName: Full=Histone acetyltransferase gcn5
 gi|5731938|emb|CAB52569.1| SAGA complex histone acetyltransferase catalytic subunit Gcn5
           [Schizosaccharomyces pombe]
 gi|42558226|dbj|BAD11106.1| histone acetyltransferase Gcn5 [Schizosaccharomyces pombe]
          Length = 454

 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 41/68 (60%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           E++PDY EVIEHPMD  T+  +L N  Y ++E+F +D   I  N   YN  +T Y++ A 
Sbjct: 375 EDVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEFIRDAKYIFDNCRSYNDSNTTYYKNAD 434

Query: 119 SIHELAKK 126
            + +  +K
Sbjct: 435 RLEKFFQK 442


>gi|47497296|dbj|BAD19338.1| putative global transcription factor group E [Oryza sativa Japonica
           Group]
 gi|47848300|dbj|BAD22164.1| putative global transcription factor group E [Oryza sativa Japonica
           Group]
 gi|215768414|dbj|BAH00643.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 480

 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 2/70 (2%)

Query: 40  LYQIKSYCCSSSIDFKMDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           L ++ +  CS+  D  +D  +L  PDY ++I+ PMD GT+RNKL +G+Y +  +F  DV 
Sbjct: 175 LKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTSPSEFAADVR 234

Query: 98  LICSNAMQYN 107
           L  SNAM YN
Sbjct: 235 LTFSNAMTYN 244


>gi|351711490|gb|EHB14409.1| Bromodomain-containing protein 4 [Heterocephalus glaber]
          Length = 1225

 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 45/77 (58%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 398 LHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 457

Query: 121 HELAKKNFENLRQDSDD 137
            ++ +  F  +  + ++
Sbjct: 458 QDVFEMRFAKMPDEPEE 474



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 128 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 187

Query: 121 HEL 123
            +L
Sbjct: 188 EKL 190


>gi|302408307|ref|XP_003001988.1| chromatin structure-remodeling complex protein RSC2 [Verticillium
           albo-atrum VaMs.102]
 gi|261358909|gb|EEY21337.1| chromatin structure-remodeling complex protein RSC2 [Verticillium
           albo-atrum VaMs.102]
          Length = 1002

 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 40/71 (56%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++IE P  F ++R K+    Y +  +F +D+ LIC NA  YN P    F  A  +
Sbjct: 115 LPDYFQIIEEPTAFSSIRKKVQKKEYTSASEFVRDLALICHNAQVYNLPSAPIFHAAVRL 174

Query: 121 HELAKKNFENL 131
            E+AK+  + L
Sbjct: 175 REVAKEKLQKL 185



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 7/99 (7%)

Query: 57  DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF-- 114
           D +ELP+Y + I+ P+    +R K     YAT++   +D+ L+  NA  +N  D+     
Sbjct: 305 DKQELPEYYDAIQKPIALDMIRQKFKRKKYATVDDLIQDLDLMFENAKLFNEDDSDIHQT 364

Query: 115 -----RQARSIHELAKKNFENLRQDSDDNEPETKVVRRG 148
                R+ARS+ +  K   ++L +  D   P  +V   G
Sbjct: 365 AIDLQREARSLAQQEKAKPDSLCRADDGRLPLAEVQHNG 403


>gi|74217519|dbj|BAC31528.2| unnamed protein product [Mus musculus]
          Length = 807

 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI SN ++YNA DTI++R A  
Sbjct: 660 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 719

Query: 120 IHE 122
           + E
Sbjct: 720 LRE 722


>gi|363731117|ref|XP_418453.3| PREDICTED: ATPase family AAA domain-containing protein 2 [Gallus
           gallus]
          Length = 1319

 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +DPEE+PDY  VI+ PMD  TV +K+    Y T   F KD+ LICSNA++YN PD
Sbjct: 935 VDPEEVPDYDTVIKQPMDLSTVLSKIDLHQYLTAGDFLKDIDLICSNALEYN-PD 988


>gi|297466946|ref|XP_002704782.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
           [Bos taurus]
          Length = 1368

 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDDNEPETKVV 145
           + +  F  +      +EPE   V
Sbjct: 449 VFEMRFAKM-----PDEPEEPAV 466



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|297476378|ref|XP_002688607.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
           [Bos taurus]
 gi|296486110|tpg|DAA28223.1| TPA: bromodomain containing 4 [Bos taurus]
          Length = 1368

 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448

Query: 123 LAKKNFENLRQDSDDNEPETKVV 145
           + +  F  +      +EPE   V
Sbjct: 449 VFEMRFAKM-----PDEPEEPAV 466



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|390342971|ref|XP_785066.2| PREDICTED: bromodomain-containing protein 7-like
           [Strongylocentrotus purpuratus]
          Length = 543

 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 39/59 (66%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I  PMDF T++ K+    Y ++++++ D   +C NAM+YN P+T+Y++ A+ +
Sbjct: 190 PGYSSIILQPMDFCTMKKKIEREDYNSIDEYKDDFVTMCENAMKYNRPETVYYKAAKKL 248


>gi|340501604|gb|EGR28366.1| hypothetical protein IMG5_177130 [Ichthyophthirius multifiliis]
          Length = 398

 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 47/78 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++ +++PDY ++I  P+D   +  +L N  Y   +QF KD+  I +NA  YN PDT+Y++
Sbjct: 301 VNKDDVPDYYDIITDPIDIKLIERRLQNNQYLDKDQFIKDIRKIFANAKLYNQPDTVYYK 360

Query: 116 QARSIHELAKKNFENLRQ 133
            A+ + E  +   E L++
Sbjct: 361 AAKELEEYIEPYLEKLKE 378


>gi|238581074|ref|XP_002389493.1| hypothetical protein MPER_11372 [Moniliophthora perniciosa FA553]
 gi|215451818|gb|EEB90423.1| hypothetical protein MPER_11372 [Moniliophthora perniciosa FA553]
          Length = 488

 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 43/66 (65%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +D  ++  Y +V+++PMDFGT+  K+  G Y +LE+F  D  L+ +NA  +N P TIY+ 
Sbjct: 38  VDTTQVTGYTDVVKNPMDFGTMTTKVNRGRYRSLEEFADDFRLVTNNAKLFNPPGTIYYT 97

Query: 116 QARSIH 121
           +A+ I 
Sbjct: 98  EAQRIE 103


>gi|426230380|ref|XP_004009251.1| PREDICTED: bromodomain-containing protein 4 [Ovis aries]
          Length = 1225

 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 5/85 (5%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 385 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 444

Query: 121 HELAKKNFENLRQDSDDNEPETKVV 145
            ++ +  F  +      +EPE   V
Sbjct: 445 QDVFEMRFAKM-----PDEPEEPAV 464



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 94  LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153

Query: 121 HEL 123
            +L
Sbjct: 154 EKL 156


>gi|343425749|emb|CBQ69283.1| related to transcription regulator SPT7 [Sporisorium reilianum
           SRZ2]
          Length = 789

 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 16/135 (11%)

Query: 15  ERRLFLVRIQQITTKGLSWNWDPQRLYQIKSYC-CSSSIDFKMDPEELPDYCEVIEHPMD 73
           ER  FL  I +I T             ++K+Y   S++   K+   + PDY +VI+HPMD
Sbjct: 35  EREEFLESIDRIIT-------------ELKNYTEHSTAFLSKVSKRDAPDYYDVIKHPMD 81

Query: 74  FGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQ 133
            GT++ K   G Y T +QF  D+ LI  N + YN+  T   R  R++  + KK    L  
Sbjct: 82  LGTMQKKTKAGQYKTKKQFAHDLNLIWDNCLVYNSDPTHPLR--RNVQFMRKKADHLLEF 139

Query: 134 DSDDNEPETKVVRRG 148
            SD ++ +  +V+ G
Sbjct: 140 ISDKSDVKDALVQWG 154


>gi|297814970|ref|XP_002875368.1| hypothetical protein ARALYDRAFT_484508 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321206|gb|EFH51627.1| hypothetical protein ARALYDRAFT_484508 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 34/49 (69%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
           +PDY  +I+HPMD GTV+  LA+G Y++  +F  DV L  +NAM YN P
Sbjct: 207 IPDYLTIIKHPMDLGTVKKNLASGVYSSPHEFAADVRLTFTNAMTYNPP 255


>gi|388854542|emb|CCF51929.1| uncharacterized protein [Ustilago hordei]
          Length = 1006

 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 11/125 (8%)

Query: 15  ERRLFLVRIQQITTKG------LSWNWDPQRLYQIKSYCCSSSIDFKMDPEELPDYCEVI 68
           ER++  + +QQ+T  G      +    DP     +  +          D +E PDY E+I
Sbjct: 57  ERKIHSLSVQQVTQYGQKLMDTVIQAIDPSDRAPLHEFFLQLP-----DAQEYPDYYEII 111

Query: 69  EHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNF 128
           + PM    ++ KL   +YA L   + D   IC+NA +YN  DT  + +A+ +H L K  +
Sbjct: 112 KRPMALEEIQQKLDQHSYAALPDVKHDFETICNNAKRYNLRDTPVWLKAKELHSLIKITY 171

Query: 129 ENLRQ 133
            ++ Q
Sbjct: 172 VHILQ 176



 Score = 42.7 bits (99), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 22/100 (22%), Positives = 49/100 (49%), Gaps = 1/100 (1%)

Query: 36  DPQRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKD 95
           D +R+   + Y      D+  D  ++P Y +VI+ P+    + +++ + +Y        D
Sbjct: 333 DLRRVIGTRGYPIVQHFDYLPDRNQVPQYYQVIQKPICLRDIEHRVFHKSYINAHALFSD 392

Query: 96  VFLICSNAMQYNAPDTIYFRQARSIHE-LAKKNFENLRQD 134
           + L+ +NA+ +  PD+  ++ A+ I +   ++    L QD
Sbjct: 393 LELMLTNAITFYPPDSPIWQDAQEIRQYFEREAIPALFQD 432


>gi|326928062|ref|XP_003210203.1| PREDICTED: LOW QUALITY PROTEIN: peregrin-like [Meleagris gallopavo]
          Length = 1217

 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI +N ++YNA DTI++R A  
Sbjct: 665 EVPDYLDHIKKPMDFQTMKQNLEAYRYLNFDDFEEDFNLIINNCLKYNAKDTIFYRAAVR 724

Query: 120 IHE 122
           + E
Sbjct: 725 LRE 727


>gi|91199557|ref|NP_081711.2| ATPase family AAA domain-containing protein 2 [Mus musculus]
 gi|148697350|gb|EDL29297.1| mCG7707 [Mus musculus]
          Length = 1364

 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + KD+ LICSNA++YN PD
Sbjct: 986  VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLKDIDLICSNALEYN-PD 1039


>gi|195401258|ref|XP_002059231.1| GJ16143 [Drosophila virilis]
 gi|194156105|gb|EDW71289.1| GJ16143 [Drosophila virilis]
          Length = 897

 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 35/57 (61%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           P Y  +I  PMDF T+R K+ +  YA L  F  D  L+C NA++YN  DT+Y + A+
Sbjct: 340 PGYSSIISKPMDFSTMRQKIDDHEYAALSDFSDDFRLMCENAIRYNHVDTVYHKAAK 396


>gi|145530509|ref|XP_001451032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418665|emb|CAK83635.1| unnamed protein product [Paramecium tetraurelia]
          Length = 220

 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 42/70 (60%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++++ PMD GTV+ KL N AY T+E+   ++ LI  N   YN P +   + A  +
Sbjct: 44  LPDYIQIVKRPMDLGTVQLKLNNNAYKTVEECLDEISLIWDNCKLYNGPQSWITKIAEKL 103

Query: 121 HELAKKNFEN 130
             L KKN +N
Sbjct: 104 ERLFKKNVKN 113


>gi|332018144|gb|EGI58753.1| Protein polybromo-1 [Acromyrmex echinatior]
          Length = 1646

 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 47/74 (63%), Gaps = 2/74 (2%)

Query: 52  IDFKMDPEE--LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
           I F++ P +   P+Y +VIE P+D  T+  K+  GAY++L   EKD+ L+C NA Q+N P
Sbjct: 211 IMFQLKPSKKLYPEYYDVIETPIDLKTIARKIQEGAYSSLGDIEKDLMLMCRNACQFNEP 270

Query: 110 DTIYFRQARSIHEL 123
            +  ++ A+ + ++
Sbjct: 271 GSQIYKDAKLLKKI 284



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 40/77 (51%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E PDY EVI+ P+    + + L N  Y  L++   D  L+  NA +YN PD+  ++ A  
Sbjct: 664 EYPDYYEVIKQPIHMEKIASTLKNNGYDNLDELVSDFILMFDNACKYNEPDSQIYKDALI 723

Query: 120 IHELAKKNFENLRQDSD 136
           +  L  ++   L +D +
Sbjct: 724 LQRLVLQSKLQLSEDEE 740



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 9/116 (7%)

Query: 38  QRLYQI--------KSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATL 89
           Q+LY+I         S  C + I      +E P Y EV+ +P+D   V+ KL    Y  +
Sbjct: 40  QQLYEILRNQKKEDGSLLCDAFIRVPKRRQE-PGYYEVVSNPIDLLKVQQKLKTDEYRDM 98

Query: 90  EQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVV 145
           +    D+ L+ +NA  +    +  ++ A  + EL       + ++ ++ EP+ K++
Sbjct: 99  DDLAADIQLMVNNAKAFYMRTSPEYKDATELWELCINTKNRIMEEYEEPEPKGKLI 154



 Score = 38.9 bits (89), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 16/70 (22%), Positives = 37/70 (52%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           PDY + I++P+    +R K+    Y T+ +   D+ ++  NA +YN   +  ++ A  + 
Sbjct: 385 PDYYKTIKNPISLLQIRTKIKKCEYGTVSEVAGDMNIMFENAKKYNMHTSRLYKCAVKLQ 444

Query: 122 ELAKKNFENL 131
           ++ ++  + L
Sbjct: 445 KIMQEKVQEL 454


>gi|224056555|ref|XP_002298908.1| global transcription factor group [Populus trichocarpa]
 gi|222846166|gb|EEE83713.1| global transcription factor group [Populus trichocarpa]
          Length = 411

 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 61/108 (56%), Gaps = 10/108 (9%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           +L DY ++I+HPMD GTV+++L+   Y + ++F +DV L  +NAM+YN        + + 
Sbjct: 61  KLHDYYKIIKHPMDLGTVKSRLSKNWYKSPKEFAEDVRLTFNNAMKYN-------EKGQD 113

Query: 120 IHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRPSLERA 167
           +H +A K  +   ++  + + +T   +RG      F   L  P+L+RA
Sbjct: 114 VHAMADKLLKIFEENWANFKAKTNFDKRGE---MGFDASLPTPALKRA 158


>gi|268553029|ref|XP_002634497.1| Hypothetical protein CBG08287 [Caenorhabditis briggsae]
          Length = 1480

 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 48/94 (51%)

Query: 59   EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
            +ELPDY +++  PMDF  +  K+  G Y T+E+   D+ L+ +NA  YN   ++    ++
Sbjct: 1213 KELPDYYQIVTKPMDFDRINKKIETGRYTTMEEVNDDIELLVNNAALYNEEGSVIVEHSK 1272

Query: 119  SIHELAKKNFENLRQDSDDNEPETKVVRRGRPPT 152
             I +L K  ++         EP T V +    PT
Sbjct: 1273 IILKLWKDQYDKFMAPPKPEEPATPVKKEKETPT 1306


>gi|260945475|ref|XP_002617035.1| histone acetyltransferase GCN5 [Clavispora lusitaniae ATCC 42720]
 gi|238848889|gb|EEQ38353.1| histone acetyltransferase GCN5 [Clavispora lusitaniae ATCC 42720]
          Length = 497

 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 54/105 (51%)

Query: 22  RIQQITTKGLSWNWDPQRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKL 81
           ++ Q   +G  +N+    L ++ ++  +      ++ EE+ DY +VI+ PMD  T+  KL
Sbjct: 380 KLAQKPKRGPHYNFMVTLLSELTNHPSAWPFAVPVNKEEVGDYYDVIKEPMDLSTMEQKL 439

Query: 82  ANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKK 126
            N  Y T +QF  D  LI +N   YNA  T YF+ A  + +   K
Sbjct: 440 ENDKYETFDQFLYDCKLIFNNCRSYNAESTTYFKNATKLEKFLNK 484


>gi|357447117|ref|XP_003593834.1| Bromodomain-containing factor [Medicago truncatula]
 gi|355482882|gb|AES64085.1| Bromodomain-containing factor [Medicago truncatula]
          Length = 520

 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 43/71 (60%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY  VI HPMD GT++ KL    Y + E+F  DV L  SNAM YN P       A+ +
Sbjct: 110 IPDYFTVISHPMDLGTIKFKLDKNIYYSKEEFAADVRLTFSNAMTYNPPSNDVHLMAKEL 169

Query: 121 HELAKKNFENL 131
           ++L ++ ++++
Sbjct: 170 NKLFERKWKDM 180


>gi|199560855|ref|NP_001128351.1| ATPase family AAA domain-containing protein 2 [Rattus norvegicus]
 gi|149066353|gb|EDM16226.1| ATPase family, AAA domain containing 2 (predicted) [Rattus
            norvegicus]
          Length = 1373

 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + KD+ LICSNA++YN PD
Sbjct: 998  VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLKDIDLICSNALEYN-PD 1051


>gi|114108122|gb|AAI23311.1| LOC398944 protein [Xenopus laevis]
          Length = 465

 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 41/74 (55%)

Query: 58  PEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           P  L DY + ++HPMD GT+R+K+ NG Y   + F  DV L+  N  +YN PD      A
Sbjct: 321 PTSLLDYSDAMKHPMDLGTIRDKMENGLYKDTQDFASDVRLMFMNCYKYNPPDNEVVNMA 380

Query: 118 RSIHELAKKNFENL 131
           R + ++ +  F  +
Sbjct: 381 RKLQDVFEGMFAKI 394


>gi|170034467|ref|XP_001845095.1| bromodomain-containing protein 7 [Culex quinquefasciatus]
 gi|167875876|gb|EDS39259.1| bromodomain-containing protein 7 [Culex quinquefasciatus]
          Length = 856

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 37/59 (62%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I  PMDF T+R K+ +  Y +L +F  D  L+C NA++YN  +T+Y + A+ +
Sbjct: 280 PGYSSIITRPMDFSTIRQKIDDNEYISLSEFSDDFKLMCDNAIRYNHSETVYHKAAKKL 338


>gi|348536160|ref|XP_003455565.1| PREDICTED: bromodomain-containing protein 3 [Oreochromis niloticus]
          Length = 678

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 41/72 (56%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           EL DY ++I+HPMD  T+R K+  G Y+  + F  DV L+ SN  +YN PD      AR 
Sbjct: 340 ELHDYHDIIKHPMDLSTIRKKMDKGEYSDPQSFATDVRLMFSNCYKYNPPDHEVVAMARK 399

Query: 120 IHELAKKNFENL 131
           + ++ +  F  +
Sbjct: 400 LQDVFEMRFAKI 411



 Score = 43.1 bits (100), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           L DY +VI++PMD GT++ +L N  Y +  +  +D   + +N   YN P  D +   QA
Sbjct: 67  LHDYHKVIKNPMDMGTIKKRLENNYYWSASEAMQDFNTMFTNCYIYNKPTDDIVLMAQA 125


>gi|401398999|ref|XP_003880449.1| hypothetical protein NCLIV_008840 [Neospora caninum Liverpool]
 gi|325114859|emb|CBZ50415.1| hypothetical protein NCLIV_008840 [Neospora caninum Liverpool]
          Length = 1223

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 40/72 (55%)

Query: 60   ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
            E PDY EV+  P+D  T++ +  NG Y T E F +D+ L+  N   YN+PDTIY++ A  
Sbjct: 1149 EAPDYYEVVRRPIDISTMKKRNRNGEYRTKEAFREDLQLMFENCRVYNSPDTIYYKYADE 1208

Query: 120  IHELAKKNFENL 131
            +        E L
Sbjct: 1209 LQAFIWPKVEAL 1220


>gi|71895457|ref|NP_001026635.1| peregrin [Gallus gallus]
 gi|60098759|emb|CAH65210.1| hypothetical protein RCJMB04_8a18 [Gallus gallus]
          Length = 1218

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI +N ++YNA DTI++R A  
Sbjct: 666 EVPDYLDHIKKPMDFQTMKQNLEAYRYLNFDDFEEDFNLIINNCLKYNAKDTIFYRAAVR 725

Query: 120 IHE 122
           + E
Sbjct: 726 LRE 728


>gi|38014413|gb|AAH60452.1| LOC398944 protein, partial [Xenopus laevis]
          Length = 466

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 41/74 (55%)

Query: 58  PEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           P  L DY + ++HPMD GT+R+K+ NG Y   + F  DV L+  N  +YN PD      A
Sbjct: 321 PTSLLDYSDAMKHPMDLGTIRDKMENGLYKDTQDFASDVRLMFMNCYKYNPPDNEVVNMA 380

Query: 118 RSIHELAKKNFENL 131
           R + ++ +  F  +
Sbjct: 381 RKLQDVFEGMFAKI 394


>gi|427780773|gb|JAA55838.1| Putative aaa+-type atpase [Rhipicephalus pulchellus]
          Length = 737

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 17/97 (17%)

Query: 14  RERRLFLVRIQQITTKGLSWNWDPQRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMD 73
           RE RLFL   + I TK          L + + Y   S     +D  E+PDY EVI+ PMD
Sbjct: 304 RELRLFL---RDILTK----------LMRDRRY---SMFAKPVDASEVPDYLEVIQQPMD 347

Query: 74  FGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
             T+  K+    Y T+ QF +D+ LICSNA++YN PD
Sbjct: 348 LETMMVKIDLHKYQTVAQFLQDIELICSNALEYN-PD 383


>gi|281209232|gb|EFA83405.1| bromodomain-containing protein [Polysphondylium pallidum PN500]
          Length = 1172

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 39/66 (59%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DY   I+HPMDFGT+RN L +G Y   ++F  D  L+ SNA  YN P       A+++ +
Sbjct: 564 DYFTYIKHPMDFGTIRNSLLDGVYEAPDEFAADCRLVFSNARLYNPPANQVHIMAKTLED 623

Query: 123 LAKKNF 128
           L +K +
Sbjct: 624 LFEKKY 629


>gi|449474115|ref|XP_002186959.2| PREDICTED: peregrin [Taeniopygia guttata]
          Length = 935

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 40/63 (63%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY + I+ PMDF T++  L    Y   + FE+D  LI +N ++YNA DTI++R A  
Sbjct: 443 EVPDYLDHIKKPMDFQTMKQNLEAYRYLNFDDFEEDFNLIINNCLKYNAKDTIFYRAAIR 502

Query: 120 IHE 122
           + E
Sbjct: 503 LRE 505


>gi|255557483|ref|XP_002519772.1| bromodomain-containing protein, putative [Ricinus communis]
 gi|223541189|gb|EEF42745.1| bromodomain-containing protein, putative [Ricinus communis]
          Length = 570

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 2/80 (2%)

Query: 56  MDPE--ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
           +DPE  E+PDY  VI +PMD GTV++KL N  Y   E+F  DV L  SNA+ YN P    
Sbjct: 106 VDPEKLEIPDYFSVITNPMDLGTVKSKLENNQYFGAEEFAADVRLTFSNALLYNPPLNYV 165

Query: 114 FRQARSIHELAKKNFENLRQ 133
            + A  + ++ +  ++ L +
Sbjct: 166 HKMAEKLKKIFETRWKALEE 185


>gi|345305966|ref|XP_001511946.2| PREDICTED: ATPase family AAA domain-containing protein 2
            [Ornithorhynchus anatinus]
          Length = 1328

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 14/128 (10%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD----- 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T + + +D+ LICSNA++YN PD     
Sbjct: 947  VDPDEVPDYVTVIKEPMDLSSVISKIDLHKYLTAKDYLRDIDLICSNALEYN-PDRDPGD 1005

Query: 111  --------TIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTKNFKKPLGRP 162
                    T+       I E   ++FE L ++  ++  +         P+  +  P G P
Sbjct: 1006 RLIRHRACTLRDTAYAIIKEELDEDFEVLCEEIQESRKKRGCSSSKYAPSYYYVMPRGNP 1065

Query: 163  SLERARSD 170
            + E  RSD
Sbjct: 1066 TSEGKRSD 1073


>gi|47212213|emb|CAF94980.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 642

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 41/72 (56%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           EL DY ++I+HPMD  T+R K+  G Y+  + F  DV L+ SN  +YN PD      AR 
Sbjct: 319 ELHDYHDIIKHPMDLSTIRKKMDKGEYSEPQSFATDVRLMFSNCYKYNPPDHEVVAMARK 378

Query: 120 IHELAKKNFENL 131
           + ++ +  F  +
Sbjct: 379 LQDVFEMRFAKI 390



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           L DY +VI++PMD GT++ +L N  Y +     +D   + +N   YN P  D +   QA
Sbjct: 51  LADYHKVIKNPMDMGTIKKRLENNYYWSASGAMQDFNTMFTNCYIYNKPTDDIVLMAQA 109


>gi|322790256|gb|EFZ15255.1| hypothetical protein SINV_09840 [Solenopsis invicta]
          Length = 1587

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 47/74 (63%), Gaps = 2/74 (2%)

Query: 52  IDFKMDPEE--LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
           I F++ P +   P+Y +VIE P+D  T+  K+  GAY++L   EKD+ L+C NA Q+N P
Sbjct: 211 IMFQLKPSKKLYPEYYDVIETPIDLKTIARKIQEGAYSSLGDMEKDLMLMCRNACQFNEP 270

Query: 110 DTIYFRQARSIHEL 123
            +  ++ A+ + ++
Sbjct: 271 GSQIYKDAKLLKKI 284



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 5/67 (7%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDT-IY----F 114
           E PDY EVI+ P+    + + L N  Y  L++   D  L+  NA +YN PD+ IY    F
Sbjct: 665 EYPDYYEVIKQPIHMEKIASTLKNNGYDNLDELVSDFILMFDNACKYNEPDSQIYKVLIF 724

Query: 115 RQARSIH 121
            + R+ H
Sbjct: 725 YRVRAEH 731



 Score = 42.0 bits (97), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 17/70 (24%), Positives = 39/70 (55%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           PDY ++I++P+    +R K+  G Y T+ +   D+ ++  NA +YN   +  ++ A  + 
Sbjct: 386 PDYYKMIKNPISLLQIRTKIKKGEYGTVSEVAGDMNIMFENAKKYNMHTSRLYKCAVKLQ 445

Query: 122 ELAKKNFENL 131
           ++ ++  + L
Sbjct: 446 KIMQEKVQEL 455



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 20/84 (23%), Positives = 42/84 (50%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y EV+ +P+D   V+ KL    Y  ++    D+ L+ +NA  +    +  ++ A  + 
Sbjct: 71  PGYYEVVSNPIDLLKVQQKLKTDEYRDMDDLAADIQLMVNNAKAFYMRTSPEYKDATELW 130

Query: 122 ELAKKNFENLRQDSDDNEPETKVV 145
           EL       + ++ ++ EP+ K++
Sbjct: 131 ELCVNTKNRIMEEYEEPEPKGKLI 154


>gi|409051976|gb|EKM61452.1| hypothetical protein PHACADRAFT_156702 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1899

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)

Query: 56   MDP--EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
            +DP  +  PDY +VI++PMD GT+  KL  G Y    +FE+D  L+C+NA  YNAP +  
Sbjct: 1243 VDPVRDRAPDYMQVIKNPMDLGTMGVKLDRGMYKNRSEFEQDFRLMCTNAKLYNAPRSFV 1302

Query: 114  FRQARSIHELAKKNFENLRQDSDDNEPETKVVRRGRP-PTKNFKKP 158
            + +A  +     K +  + +     E +   +R+  P P    K P
Sbjct: 1303 YDEAVRLESYFDKEWARVNKTL---EAKAATIRKAEPAPVPVVKTP 1345



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%)

Query: 62   PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDT 111
            P Y + I++PMDF T++ KL  G Y T++ F KDV L  +N  Q+N P T
Sbjct: 1693 PTYYDEIQNPMDFSTMQAKLTQGEYQTMDDFAKDVELTLANCRQFNPPTT 1742


>gi|224061031|ref|XP_002300324.1| global transcription factor group [Populus trichocarpa]
 gi|222847582|gb|EEE85129.1| global transcription factor group [Populus trichocarpa]
          Length = 564

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 48/82 (58%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           ++PDY  VI +PMD GTV++KL    YA++ +F  D+ L  SNAM YN P     R A  
Sbjct: 111 KIPDYFTVISNPMDLGTVKSKLGKNFYASINEFAADIRLTFSNAMLYNPPSNNVHRMAEE 170

Query: 120 IHELAKKNFENLRQDSDDNEPE 141
           ++ + +  ++ L ++ +   P+
Sbjct: 171 LNGIFETGWKALEENWNHEGPK 192


>gi|322707961|gb|EFY99538.1| RSC complex subunit RSC1 [Metarhizium anisopliae ARSEF 23]
          Length = 888

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 40/76 (52%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY EVI  P+ F T+R+K+    Y T+ +F KDV  IC NA  YN P    F  A  +
Sbjct: 84  LPDYFEVITDPIAFSTIRSKIQKKQYLTIAEFVKDVAQICHNAQVYNRPSAPIFGAAVRL 143

Query: 121 HELAKKNFENLRQDSD 136
            E+  +  + L    D
Sbjct: 144 REIFHEQLQKLVAKGD 159


>gi|241699681|ref|XP_002413146.1| bromodomain and PHD finger-containing protein 1, brpf1, putative
           [Ixodes scapularis]
 gi|215506960|gb|EEC16454.1| bromodomain and PHD finger-containing protein 1, brpf1, putative
           [Ixodes scapularis]
          Length = 1074

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 3/100 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY   I  PMDF ++  KL    YA+L+QFE D  L+  N   YN+ DT Y+R A  +
Sbjct: 543 VPDYLHYISQPMDFWSMEQKLRRHEYASLDQFEADFRLVVDNCTTYNSKDTPYYRAAVKM 602

Query: 121 HELAKKNFENLRQDSD--DNEPETKVVRRGRPPTKNFKKP 158
            E         R  ++    +P+T +   G  P +N ++P
Sbjct: 603 REQGGALIRQARAQAERCGYDPDTGMHLDGS-PGRNAERP 641


>gi|388854756|emb|CCF51649.1| uncharacterized protein [Ustilago hordei]
          Length = 1241

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 62/116 (53%), Gaps = 1/116 (0%)

Query: 23  IQQITTKGLSWNWDPQRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLA 82
           I+++ +KGL +   P+ +  ++           ++P+ +P Y +VI+ PMDFGT++ K+ 
Sbjct: 192 IKRLRSKGL-YEALPKLIENLQRRDSYKFFCEPVNPDNVPGYTDVIKTPMDFGTMQRKVD 250

Query: 83  NGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDN 138
           +  Y+ +++F  D  L+  NA  +N   T+Y+ +A+ I     +  E      +DN
Sbjct: 251 DRLYSHMDEFRVDFQLVILNAQTFNPEGTLYYNEAKRIGTWGNRAIEREGMAVNDN 306


>gi|291222078|ref|XP_002731045.1| PREDICTED: protein EMSY-like [Saccoglossus kowalevskii]
          Length = 1358

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYN 107
            +DP E P Y ++I+ PMDFGT++ KL  G Y     F +D+ L+  N M+YN
Sbjct: 1254 VDPHEAPGYHKIIKQPMDFGTIKKKLETGQYRDFNDFNQDMILVKGNCMKYN 1305


>gi|356549150|ref|XP_003542960.1| PREDICTED: transcription factor GTE8-like [Glycine max]
          Length = 566

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 6/88 (6%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY  +I HPMD GT+++KL    Y+  E+F  DV L  SNAM+YN P       A+ +
Sbjct: 110 IPDYFTIISHPMDLGTIKSKLERNIYSGTEEFADDVRLTFSNAMKYNPPGNDVHMMAKEL 169

Query: 121 HELAKKNFEN------LRQDSDDNEPET 142
            ++  + +++         + D +E ET
Sbjct: 170 SKIFDRKWKDFGRKWKFEDEHDKSETET 197


>gi|336386402|gb|EGO27548.1| hypothetical protein SERLADRAFT_382647 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 308

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 45/74 (60%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E PDY E+I+ PMD  +++ K+ +G  +T  +F++DV+L+ +NAM YN P +  +  A  
Sbjct: 225 EAPDYHEIIKRPMDLKSIKAKIKDGVISTSLEFQRDVYLMFANAMMYNRPGSDIYHMAED 284

Query: 120 IHELAKKNFENLRQ 133
           +   ++ +    RQ
Sbjct: 285 MMIESEVHINTFRQ 298


>gi|224082720|ref|XP_002306812.1| histone acetyltransferase [Populus trichocarpa]
 gi|222856261|gb|EEE93808.1| histone acetyltransferase [Populus trichocarpa]
          Length = 564

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKL-ANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF 114
           +D  ++PDY ++I+ PMD  T+  ++ +   Y TLE F  DV  +C+NA  YN+PDTIY+
Sbjct: 483 VDARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTLEMFIADVKRMCANARTYNSPDTIYY 542

Query: 115 R 115
           +
Sbjct: 543 K 543


>gi|78099817|sp|Q8CDM1.1|ATAD2_MOUSE RecName: Full=ATPase family AAA domain-containing protein 2
 gi|26325794|dbj|BAC26651.1| unnamed protein product [Mus musculus]
          Length = 1040

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + KD+ LICSNA++YN PD
Sbjct: 662 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLKDIDLICSNALEYN-PD 715


>gi|388855395|emb|CCF51059.1| related to transcription regulator SPT7 [Ustilago hordei]
          Length = 812

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 14/95 (14%)

Query: 15  ERRLFLVRIQQITTKGLSWNWDPQRLYQIKSYC-CSSSIDFKMDPEELPDYCEVIEHPMD 73
           ER  FL  I +I T             ++K+Y   S++   K+   + PDY +VI+HPMD
Sbjct: 35  EREEFLESIDRIIT-------------ELKNYTEHSTAFLSKVSKRDAPDYYDVIKHPMD 81

Query: 74  FGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNA 108
            GT++ K+ +G Y T +QF  D+ LI  N + YN+
Sbjct: 82  LGTMQKKVKSGQYKTKKQFAADLELIWENCLTYNS 116


>gi|356574042|ref|XP_003555161.1| PREDICTED: transcription factor GTE8-like [Glycine max]
          Length = 741

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 44/79 (55%), Gaps = 3/79 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY  +I+ PMD GTV+NKLA+G YA   +F  DV L  SNAM YN         A ++
Sbjct: 208 LPDYFTIIKRPMDLGTVKNKLASGEYAGPLEFADDVKLTFSNAMDYNPSGNDVHLMADTL 267

Query: 121 H---ELAKKNFENLRQDSD 136
           +   EL  K  E   Q SD
Sbjct: 268 NKYFELRWKAIEKKLQKSD 286


>gi|443685125|gb|ELT88840.1| hypothetical protein CAPTEDRAFT_99170, partial [Capitella teleta]
          Length = 87

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 35/59 (59%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I  PMD  T+R K+  G Y T   +  D  L+C NAM YN PDT+Y++ A+ +
Sbjct: 18  PMYSRIISSPMDLSTMRTKIDAGEYETFPDYRADFKLMCENAMTYNLPDTVYYKGAQKL 76


>gi|322801602|gb|EFZ22243.1| hypothetical protein SINV_03245 [Solenopsis invicta]
          Length = 877

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 40/71 (56%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+ PMD GTV+ K+ N  Y T  +F  DV LI +N  +YN PD      AR +
Sbjct: 426 LHDYHEIIKKPMDLGTVKTKMDNRQYKTAHEFASDVRLIFTNCYKYNPPDHDVVSMARKL 485

Query: 121 HELAKKNFENL 131
            ++ +  +  +
Sbjct: 486 QDIFEMRYAKV 496



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           LPDY ++I+ PMD GT++ +L N  Y + ++  +D   + +N   YN P  D +   QA
Sbjct: 84  LPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQA 142


>gi|307172331|gb|EFN63819.1| Bromodomain adjacent to zinc finger domain protein 1A [Camponotus
            floridanus]
          Length = 1460

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 50/88 (56%)

Query: 59   EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
            +E+PDY ++I +PMDFGT++ KL NG Y TL++F  D  LI  N   YN   +  +    
Sbjct: 1348 DEVPDYHDIISNPMDFGTIKYKLGNGDYETLDKFFSDCQLIFENCRLYNKEHSSVYNAGM 1407

Query: 119  SIHELAKKNFENLRQDSDDNEPETKVVR 146
             + +  +K  + L  + ++   E+KV R
Sbjct: 1408 RLRKYFEKRCKELSLNFNELSQESKVKR 1435


>gi|47189689|emb|CAG13929.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 108

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/83 (34%), Positives = 47/83 (56%)

Query: 38  QRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           Q + Q++    S+   F +     P Y  +I+ PMDF T+++K+    Y +L++   D  
Sbjct: 11  QLIRQLQRKDPSAFFSFPVTDLVAPGYSSIIKRPMDFSTMKDKVKKECYKSLDELMVDFK 70

Query: 98  LICSNAMQYNAPDTIYFRQARSI 120
           ++C NAM YN PDTIY + AR +
Sbjct: 71  IMCENAMIYNKPDTIYHKAARKL 93


>gi|326431081|gb|EGD76651.1| hypothetical protein PTSG_12670 [Salpingoeca sp. ATCC 50818]
          Length = 1413

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 31  LSWNWDPQR-LYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATL 89
           LSW  D    L Q++++  +      +   E P Y E+I+HP+    V  KL +  Y  +
Sbjct: 714 LSWYDDAWNVLDQVRNHEDAWPFQEPVTDAEAPHYSEIIKHPIALDRVGQKLEDEVYDHV 773

Query: 90  EQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNF 128
           ++F  DV LI  N   YNAP TI+F+ A ++ E  ++  
Sbjct: 774 DEFAADVLLIFDNCRTYNAPRTIFFKLANTLQEYFRRRM 812


>gi|327264790|ref|XP_003217194.1| PREDICTED: bromodomain-containing protein 4-like [Anolis
           carolinensis]
          Length = 1344

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY ++I+HPMD  T+++KL N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 389 LHDYRDIIKHPMDLSTIKSKLENRDYRDAQEFAADVRLMFSNCYKYNPPDHEVVAMARKL 448

Query: 121 HELAKKNFENLRQDSDDNEPETKVV 145
            ++ +  F  +      +EPE  V+
Sbjct: 449 QDVFEMRFAKM-----PDEPEEPVI 468



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 6/86 (6%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           +LPDY ++I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A +
Sbjct: 93  QLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEA 152

Query: 120 IHELAKKNFENLRQDSDDNEPETKVV 145
           + +L  +    + Q+      ET++V
Sbjct: 153 LEKLFLQKISEMTQE------ETEIV 172


>gi|427795829|gb|JAA63366.1| Putative 26s proteasome regulatory complex atpase rpt2, partial
           [Rhipicephalus pulchellus]
          Length = 1040

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 17/97 (17%)

Query: 14  RERRLFLVRIQQITTKGLSWNWDPQRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMD 73
           RE RLFL   + I TK          L + + Y   S     +D  E+PDY EVI+ PMD
Sbjct: 636 RELRLFL---RDILTK----------LMRDRRY---SMFAKPVDASEVPDYLEVIQQPMD 679

Query: 74  FGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
             T+  K+    Y T+ QF +D+ LICSNA++YN PD
Sbjct: 680 LETMMVKIDLHKYQTVAQFLQDIELICSNALEYN-PD 715


>gi|393214462|gb|EJC99954.1| hypothetical protein FOMMEDRAFT_127365 [Fomitiporia mediterranea
           MF3/22]
          Length = 1195

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 4/137 (2%)

Query: 1   MQSVVDLAVLTVKRE-RRLFLVRIQQITTKGLSWNWDPQRLYQIKSYCCSSSIDFKMDP- 58
           ++SV  LA L  KRE ++L  V++ Q     + +   PQ    ++         +  DP 
Sbjct: 433 LESVRMLAELARKRETQKLKQVQVLQHVCSTIFYPHIPQMRQALEKIMAFDRYSYFRDPV 492

Query: 59  --EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQ 116
              E+PDY EVI  PM +  +  KL    Y  ++ F+ DV L+  NAM YN  D+ + + 
Sbjct: 493 SKTEVPDYFEVIRKPMCWSMIETKLKTNDYWNIKDFQDDVCLVVDNAMLYNKRDSPFSKT 552

Query: 117 ARSIHELAKKNFENLRQ 133
           A  I   A    E L Q
Sbjct: 553 AARIKTHAGPILEELNQ 569


>gi|322701894|gb|EFY93642.1| RSC complex subunit RSC1 [Metarhizium acridum CQMa 102]
          Length = 891

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 39/76 (51%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY EVI  P+ F T+R+K+    Y T  +F KDV  IC NA  YN P    F  A  +
Sbjct: 84  LPDYFEVITDPIAFSTIRSKIQKKQYLTFAEFVKDVAQICHNAQVYNRPSAPIFGAAVRL 143

Query: 121 HELAKKNFENLRQDSD 136
            E+  +  + L    D
Sbjct: 144 REIFHEQLQKLVAKGD 159


>gi|440473531|gb|ELQ42321.1| integral membrane protein [Magnaporthe oryzae Y34]
          Length = 1023

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 48/83 (57%)

Query: 40  LYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLI 99
           LYQ++++  +      ++ +E+PDY +VI  PMD  T+  +L    YAT +   +DV LI
Sbjct: 311 LYQLQNHQQAWPFLKPVNKDEIPDYYKVITSPMDLSTIEERLEQDLYATPKDLVEDVKLI 370

Query: 100 CSNAMQYNAPDTIYFRQARSIHE 122
            SN  QYN P TIY + A  + +
Sbjct: 371 VSNCRQYNNPTTIYHKCANKLEK 393


>gi|389624787|ref|XP_003710047.1| histone acetyltransferase GCN5 [Magnaporthe oryzae 70-15]
 gi|351649576|gb|EHA57435.1| histone acetyltransferase GCN5 [Magnaporthe oryzae 70-15]
          Length = 411

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 47/81 (58%)

Query: 40  LYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLI 99
           LYQ++++  +      ++ +E+PDY +VI  PMD  T+  +L    YAT +   +DV LI
Sbjct: 311 LYQLQNHQQAWPFLKPVNKDEIPDYYKVITSPMDLSTIEERLEQDLYATPKDLVEDVKLI 370

Query: 100 CSNAMQYNAPDTIYFRQARSI 120
            SN  QYN P TIY + A  +
Sbjct: 371 VSNCRQYNNPTTIYHKCANKL 391


>gi|312376595|gb|EFR23632.1| hypothetical protein AND_12530 [Anopheles darlingi]
          Length = 895

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 37/59 (62%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I  PMDF T+R K+ +  Y T+ +F  D  L+C NA++YN  +T+Y + A+ +
Sbjct: 345 PGYSSIIMKPMDFSTIRQKIDDNEYNTVSEFSDDFKLMCENAIKYNHAETVYHKAAKKL 403


>gi|357627129|gb|EHJ76924.1| hypothetical protein KGM_19355 [Danaus plexippus]
          Length = 686

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 38/59 (64%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I+ PMDF T++ K+ +  Y +L  F  D  L+C+NAM+YN P T+Y + A+ +
Sbjct: 221 PGYSTIIKKPMDFSTMKQKIDDNEYKSLNCFISDFKLMCNNAMKYNKPGTVYHKAAKRL 279


>gi|393231565|gb|EJD39156.1| Bromodomain-containing protein, partial [Auricularia delicata
           TFB-10046 SS5]
          Length = 69

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 41/65 (63%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           +DP   P Y +V+++PMDFGT+  K+  G Y T++ F KD  L+  NA  +N P +IY+ 
Sbjct: 5   VDPAVAPGYKDVVKNPMDFGTMTKKVQRGRYKTMDDFTKDFQLVIDNAKLFNPPGSIYYT 64

Query: 116 QARSI 120
           +A  I
Sbjct: 65  EAERI 69


>gi|410902639|ref|XP_003964801.1| PREDICTED: uncharacterized protein LOC101061335 [Takifugu rubripes]
          Length = 1416

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 5/92 (5%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY ++I+HPMD  T++ KL N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 404 LHDYHDIIKHPMDLSTIKAKLENRQYREPQEFAADVRLMFSNCYKYNPPDHEVVAMARKL 463

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGRPPT 152
            ++ +  F  +      +EPE K +     PT
Sbjct: 464 QDVFEMRFAKM-----PDEPEGKSLVSATAPT 490



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 6/85 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY  +I+ PMD GT++ +L N  Y   ++  +D   + +N   YN P       A ++
Sbjct: 81  LPDYYTIIKTPMDMGTIKKRLENSYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 140

Query: 121 HELAKKNFENLRQDSDDNEPETKVV 145
            ++  +    + Q+      ET++V
Sbjct: 141 EKVFLQKVTEMPQE------ETEIV 159


>gi|326494522|dbj|BAJ94380.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 274

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 11/100 (11%)

Query: 56  MDPE--ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
           +DP+   +PDY +VI +PMD GTV+ KL N +Y + + F  DV L  SNAM YN P    
Sbjct: 104 VDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP---- 159

Query: 114 FRQARSIHELAKKNFENLRQDSDDNEPETKVVRRGRPPTK 153
                 +H +A++   N+  +S+    E K + R   P +
Sbjct: 160 ---GNQVHTVAEQ--LNIMFNSEWTSYERKWIDRNLKPVQ 194


>gi|440483644|gb|ELQ63994.1| histone acetyltransferase GCN5 [Magnaporthe oryzae P131]
          Length = 1023

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 48/83 (57%)

Query: 40  LYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLI 99
           LYQ++++  +      ++ +E+PDY +VI  PMD  T+  +L    YAT +   +DV LI
Sbjct: 311 LYQLQNHQQAWPFLKPVNKDEIPDYYKVITSPMDLSTIEERLEQDLYATPKDLVEDVKLI 370

Query: 100 CSNAMQYNAPDTIYFRQARSIHE 122
            SN  QYN P TIY + A  + +
Sbjct: 371 VSNCRQYNNPTTIYHKCANKLEK 393


>gi|449440580|ref|XP_004138062.1| PREDICTED: transcription factor GTE10-like [Cucumis sativus]
 gi|449501388|ref|XP_004161353.1| PREDICTED: transcription factor GTE10-like [Cucumis sativus]
          Length = 781

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 37/65 (56%), Gaps = 7/65 (10%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY  VI+HPMD GTV++KL  G Y     F  DV L  SNAM YN P       A  +
Sbjct: 236 IPDYFTVIKHPMDLGTVKSKLTAGEYTHPLDFAADVRLTFSNAMTYNPP-------ANDV 288

Query: 121 HELAK 125
           H +AK
Sbjct: 289 HTMAK 293


>gi|413956933|gb|AFW89582.1| hypothetical protein ZEAMMB73_669630 [Zea mays]
          Length = 185

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 3/55 (5%)

Query: 39  RLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFE 93
           RL +  +Y   S     +D EELPDY ++I+HPMDF T+R KL N +Y+ LEQFE
Sbjct: 127 RLQKKDTYGVFSE---PVDAEELPDYFDIIDHPMDFSTIREKLLNDSYSKLEQFE 178


>gi|159164649|pdb|2I8N|A Chain A, Solution Structure Of The Second Bromodomain Of Brd4
          Length = 114

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/73 (36%), Positives = 42/73 (57%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL    Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 36  LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 95

Query: 121 HELAKKNFENLRQ 133
            ++ +  F  + Q
Sbjct: 96  QDVFEMRFAKMLQ 108


>gi|297791027|ref|XP_002863398.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309233|gb|EFH39657.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 488

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 44/74 (59%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E+PDY  VI  PMD GTV++KL    Y+  ++F  DV L  +NAM+YN P       A+ 
Sbjct: 92  EIPDYFSVIRKPMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMRYNPPGNEVHTIAKE 151

Query: 120 IHELAKKNFENLRQ 133
           I E+ +  ++ L++
Sbjct: 152 IKEIFEVRWKLLKK 165


>gi|397580684|gb|EJK51670.1| hypothetical protein THAOC_29137 [Thalassiosira oceanica]
          Length = 1171

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 41/65 (63%)

Query: 58  PEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           P  L DY + I +P+D  T+R+KL +  Y TL  F +D   +C NA  YNA +T++ R A
Sbjct: 726 PTALTDYYQTIHNPIDMKTMRDKLFSDQYKTLASFIQDARTLCVNACLYNAEETVFARTA 785

Query: 118 RSIHE 122
           +SI++
Sbjct: 786 KSIYD 790


>gi|50287799|ref|XP_446329.1| hypothetical protein [Candida glabrata CBS 138]
 gi|59799533|sp|Q6FTW5.1|GCN5_CANGA RecName: Full=Histone acetyltransferase GCN5
 gi|49525636|emb|CAG59253.1| unnamed protein product [Candida glabrata]
          Length = 546

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 40/68 (58%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++ EE+PDY E I+ PMD  T+  KL N  Y  +E+F  D  L+C+N   YN  +T Y++
Sbjct: 463 VNKEEVPDYYEFIKEPMDLSTMELKLENNKYEKMEEFIYDARLVCNNCRLYNGENTSYYK 522

Query: 116 QARSIHEL 123
            A  + + 
Sbjct: 523 YANRLEKF 530


>gi|408389787|gb|EKJ69214.1| hypothetical protein FPSE_10612 [Fusarium pseudograminearum CS3096]
          Length = 913

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 9/101 (8%)

Query: 40  LYQIKSYCCSSSID-------FKMDPEE--LPDYCEVIEHPMDFGTVRNKLANGAYATLE 90
           ++ + +Y CS   D       F+  P    LPDY E+I  P+ F T+R K     Y++  
Sbjct: 68  IHNLSTYLCSVEDDGEQLAAGFQRIPNRRTLPDYFEIISEPIAFSTIRGKTQKKQYSSFA 127

Query: 91  QFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENL 131
           +F KDV  IC NA  YN P    F  A  + E+  +  + L
Sbjct: 128 EFVKDVAQICHNAQVYNRPSAPIFGAAVRLREILVRELQKL 168


>gi|452005053|gb|EMD97509.1| hypothetical protein COCHEDRAFT_1190359 [Cochliobolus
           heterostrophus C5]
          Length = 1138

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 3/92 (3%)

Query: 40  LYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLI 99
           L ++K+   +     +++  E PDY  VI+HPMD GT+  KL    Y + ++F  D+ LI
Sbjct: 340 LMELKANEHAHPFLQRVNKREAPDYYNVIKHPMDIGTMMKKLKQLQYKSKKEFVDDLMLI 399

Query: 100 CSNAMQYNAPDTIYFRQARSIHELAKKNFENL 131
            SN ++YNA D  +F + +++H   KK  E L
Sbjct: 400 WSNCLKYNA-DPSHFLRKKALH--MKKETEKL 428


>gi|350415036|ref|XP_003490512.1| PREDICTED: protein polybromo-1-like [Bombus impatiens]
          Length = 1651

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 2/72 (2%)

Query: 54  FKMDPEE--LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDT 111
           F++ P +   P+Y +VIE P+D  TV  K+  GAY+++   EKD+ L+C NA Q+N P +
Sbjct: 213 FQLKPSKKLYPEYYDVIETPVDLKTVARKIQEGAYSSITDMEKDLMLMCRNACQFNEPGS 272

Query: 112 IYFRQARSIHEL 123
             ++ A+ + ++
Sbjct: 273 QIYKDAKLLKKI 284



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 40/77 (51%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E PDY EVI+ PM+   + + L N  Y  L++   D  L+  NA +YN PD+  ++ A  
Sbjct: 666 EYPDYYEVIKQPMNMEKIASALKNNGYENLDELVSDFILMFDNACKYNEPDSQIYKDALI 725

Query: 120 IHELAKKNFENLRQDSD 136
           +  L  +    L +D +
Sbjct: 726 LQRLVLQTKLQLSEDEE 742



 Score = 43.1 bits (100), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 9/96 (9%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           PDY + I++P+    +R K+  G Y T+ +   D+ ++  NA +YN   +  ++ A  + 
Sbjct: 386 PDYYKTIKNPISLLQIRTKIKKGEYGTVSEVAGDMNIMFENAKKYNIHTSRLYKCAVKLQ 445

Query: 122 ELAKKNFENL---RQDSD-DNEPET-----KVVRRG 148
           ++ ++    L    QDSD D+E E      K+++R 
Sbjct: 446 KIMQEKVHELLEFDQDSDSDSEFENSSHQPKLIKRA 481



 Score = 42.0 bits (97), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y EV+ +P+D   V+ KL    Y  ++    D+ L+ +NA  +    +  ++ A  + 
Sbjct: 71  PGYYEVVTNPIDLLKVQQKLKTDEYRDMDDLAADIQLMVNNAKAFYMRTSPEYKDATELW 130

Query: 122 ELAKKNFENLRQDSDDNEPETKVVRR-GR 149
           EL       + ++ +D EP+ K++ + GR
Sbjct: 131 ELCINTKNRIMEEYEDPEPKGKLILKVGR 159


>gi|307182453|gb|EFN69688.1| Homeotic protein female sterile [Camponotus floridanus]
          Length = 1541

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 37/63 (58%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+ PMD GTV+ K+ N  Y T  +F  DV LI +N  +YN PD      AR +
Sbjct: 469 LHDYHEIIKKPMDLGTVKAKMDNRQYKTAHEFASDVRLIFTNCYKYNPPDHDVVSMARKL 528

Query: 121 HEL 123
            ++
Sbjct: 529 QDI 531



 Score = 46.6 bits (109), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           LPDY ++I+ PMD GT++ +L N  Y + ++  +D   + +N   YN P  D +   QA
Sbjct: 125 LPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQA 183


>gi|296227261|ref|XP_002759299.1| PREDICTED: ATPase family AAA domain-containing protein 2 [Callithrix
            jacchus]
          Length = 1390

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 1011 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1064


>gi|384496605|gb|EIE87096.1| hypothetical protein RO3G_11807 [Rhizopus delemar RA 99-880]
          Length = 1667

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 42/71 (59%)

Query: 62   PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
            P+Y ++I++PMD   ++ K+ N  Y T  QFE D+ L+ +N   YN P T  + + +++ 
Sbjct: 1079 PNYYKIIKNPMDLSLIKRKVENKEYTTFRQFEDDIRLMLNNCYTYNGPGTYVYNEGQALE 1138

Query: 122  ELAKKNFENLR 132
             + +K   NLR
Sbjct: 1139 AVFEKEIANLR 1149



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 51/91 (56%)

Query: 48   CSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYN 107
            C++  +  +D   LPDY ++I+ PMD  T+  +L +G Y +L+  ++D+ L+  N   YN
Sbjct: 1542 CAALFNEPVDLSALPDYAQIIKKPMDLRTIWERLESGKYTSLKAIDQDIRLVFKNCFTYN 1601

Query: 108  APDTIYFRQARSIHELAKKNFENLRQDSDDN 138
            A  T  + Q + + +   K  ++LR   ++N
Sbjct: 1602 AVGTFGYEQGKQLEKYYHKINKDLRARINNN 1632



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 61   LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
            +P Y  +I+ PMD GTV  KL N  Y    +  +D+ L+  N   +N P+T  + +A+ +
Sbjct: 1278 VPHYFTIIKEPMDLGTVETKLRNNEYTNPLEMNEDIRLVFRNCYTFNPPNTYVYNEAKML 1337

Query: 121  HELAKKNFE 129
             E   K+++
Sbjct: 1338 EEDYNKDWQ 1346


>gi|157127334|ref|XP_001654928.1| hypothetical protein AaeL_AAEL002215 [Aedes aegypti]
 gi|108882363|gb|EAT46588.1| AAEL002215-PA [Aedes aegypti]
          Length = 849

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 37/59 (62%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I  PMDF T+R K+ +  Y ++ +F  D  L+C NA++YN  +T+Y + A+ +
Sbjct: 279 PGYSTIITRPMDFSTIRQKIDDNEYTSVSEFSDDFKLMCENAIRYNHSETVYHKAAKKL 337


>gi|224013794|ref|XP_002296561.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968913|gb|EED87257.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 89

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%)

Query: 56  MDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
           +DP EL  PDY EVI++PMD GTV+ +L NG Y ++ + E D+ L   NAM YN   ++ 
Sbjct: 19  VDPVELGLPDYFEVIKNPMDLGTVKKRLENGLYRSINEVEVDINLTFDNAMLYNPEGSVV 78

Query: 114 FRQARSIHE 122
           +  A+ + +
Sbjct: 79  WSMAKELKD 87


>gi|444707946|gb|ELW49085.1| ATPase family AAA domain-containing protein 2 [Tupaia chinensis]
          Length = 1227

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 847 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 900


>gi|403283463|ref|XP_003933140.1| PREDICTED: ATPase family AAA domain-containing protein 2 [Saimiri
            boliviensis boliviensis]
          Length = 1382

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 1003 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1056


>gi|158300113|ref|XP_553263.2| AGAP009307-PA [Anopheles gambiae str. PEST]
 gi|157013845|gb|EAL39099.2| AGAP009307-PA [Anopheles gambiae str. PEST]
          Length = 877

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 37/59 (62%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I  PMDF T+R K+ +  Y ++ +F  D  L+C NA++YN  +T+Y + A+ +
Sbjct: 309 PGYSSIILKPMDFSTIRQKIEDNEYGSVTEFSDDFKLMCENAIKYNHSETVYHKAAKKL 367


>gi|351699079|gb|EHB01998.1| ATPase family AAA domain-containing protein 2 [Heterocephalus
           glaber]
          Length = 1404

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 917 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 970


>gi|224136059|ref|XP_002322229.1| global transcription factor group [Populus trichocarpa]
 gi|222869225|gb|EEF06356.1| global transcription factor group [Populus trichocarpa]
          Length = 709

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 4/69 (5%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY  +I+HPMD GTV++K+ +G Y++   F  DV L  SNAM+YN P         S+
Sbjct: 196 IPDYFTIIKHPMDLGTVKSKIVSGEYSSPLGFAADVRLTFSNAMKYNPPGN----DVHSM 251

Query: 121 HELAKKNFE 129
            E  +K FE
Sbjct: 252 AETLRKYFE 260


>gi|291388493|ref|XP_002710807.1| PREDICTED: Cell Division Cycle related family member (cdc-48.2)-like
            [Oryctolagus cuniculus]
          Length = 1374

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 995  VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1048


>gi|349803665|gb|AEQ17305.1| putative bromodomain-containing protein 7 [Pipa carvalhoi]
          Length = 200

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 39/59 (66%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P Y  +I++PMDF T++ K+ N  Y ++E+ +++   IC NAM YN P TIY++  + +
Sbjct: 96  PGYSMIIKNPMDFSTMKEKIRNSEYESIEELKENFKQICHNAMIYNKPGTIYYKADKKL 154


>gi|355673876|gb|AER95198.1| bromodomain and PHD finger containing, 3 [Mustela putorius furo]
          Length = 79

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/49 (57%), Positives = 35/49 (71%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNA 108
           E+PDY E I  PMDF T+R KL +  Y TLE+FE+D  LI +N M+YNA
Sbjct: 30  EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNA 78


>gi|452983535|gb|EME83293.1| hypothetical protein MYCFIDRAFT_39249 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 425

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 3/75 (4%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           +E+ DY EVI+ PMDF T+  KL    Y T+E F KD  LI  N  +YNA  T Y   A+
Sbjct: 334 DEVHDYYEVIKEPMDFSTMEKKLEGDQYETVEDFIKDTLLIVRNCKRYNAETTPY---AK 390

Query: 119 SIHELAKKNFENLRQ 133
           + ++L K+ ++ +R+
Sbjct: 391 AANKLEKEMWKKVRE 405


>gi|383859381|ref|XP_003705173.1| PREDICTED: homeotic protein female sterile-like [Megachile
           rotundata]
          Length = 1489

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 41/71 (57%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY ++I+ PMD GTV+ K+ N  Y T ++F  DV LI +N  +YN PD      AR +
Sbjct: 445 LHDYHDIIKKPMDLGTVKTKMDNREYKTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKL 504

Query: 121 HELAKKNFENL 131
            ++ +  +  +
Sbjct: 505 QDVFEMRYAKI 515



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           LPDY ++I+ PMD GT++ +L N  Y + ++  +D   + +N   YN P  D +   QA
Sbjct: 102 LPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQA 160


>gi|260942759|ref|XP_002615678.1| hypothetical protein CLUG_04560 [Clavispora lusitaniae ATCC 42720]
 gi|238850968|gb|EEQ40432.1| hypothetical protein CLUG_04560 [Clavispora lusitaniae ATCC 42720]
          Length = 1563

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 46/78 (58%)

Query: 62   PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
            PDY  +I+HP+   TV+ ++ N  Y  + +F +D+ +I SNA  YN   ++ +  A ++ 
Sbjct: 1428 PDYYVLIKHPLALDTVKKRIGNKTYTNIREFLEDLHMIFSNARIYNEEGSLVYNDATTLE 1487

Query: 122  ELAKKNFENLRQDSDDNE 139
             LA  N+++L   +D+ E
Sbjct: 1488 NLAISNYKDLYASADEEE 1505


>gi|219118718|ref|XP_002180126.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408383|gb|EEC48317.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1056

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 2/78 (2%)

Query: 56  MDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
           +DP EL   DY E+I+ PMD GT++ +L + AY +++ F+ D+FL   NAM YN   ++ 
Sbjct: 199 VDPVELGLVDYFEIIKKPMDLGTIQKRLESSAYHSIDDFKTDIFLTFENAMVYNEDGSVV 258

Query: 114 FRQARSIHELAKKNFENL 131
           +  A+ +   A+ + + L
Sbjct: 259 YDMAKQLKVKAESDMKRL 276


>gi|46255667|gb|AAH10686.1| ATAD2 protein, partial [Homo sapiens]
          Length = 715

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 338 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 391


>gi|153792536|ref|NP_060022.1| ATPase family AAA domain-containing protein 2B isoform 1 [Homo
            sapiens]
 gi|296439432|sp|Q9ULI0.3|ATD2B_HUMAN RecName: Full=ATPase family AAA domain-containing protein 2B
          Length = 1458

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 987  VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1040


>gi|402879067|ref|XP_003903177.1| PREDICTED: ATPase family AAA domain-containing protein 2 [Papio
            anubis]
          Length = 1380

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 1002 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1055


>gi|350416106|ref|XP_003490842.1| PREDICTED: homeotic protein female sterile-like isoform 2 [Bombus
           impatiens]
          Length = 1452

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 41/71 (57%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY ++I+ PMD GTV+ K+ N  Y T ++F  DV LI +N  +YN PD      AR +
Sbjct: 411 LHDYHDIIKKPMDLGTVKTKMDNREYKTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKL 470

Query: 121 HELAKKNFENL 131
            ++ +  +  +
Sbjct: 471 QDVFEMRYAKI 481



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           LPDY ++I+ PMD GT++ +L N  Y + ++  +D   + +N   YN P  D +   QA
Sbjct: 94  LPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQA 152


>gi|384247903|gb|EIE21388.1| hypothetical protein COCSUDRAFT_33651 [Coccomyxa subellipsoidea
           C-169]
          Length = 474

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 3/78 (3%)

Query: 46  YCCSSSIDFK--MDPEELPDYCEVIEHPMDFGTVRNKLAN-GAYATLEQFEKDVFLICSN 102
           Y    S  F+  +D E++PDY E+++ P+D  T+  +LA    Y TL  F  DV  +C+N
Sbjct: 370 YSLDDSWPFREPVDAEDVPDYYEIVKDPVDLSTIEQRLARRDYYVTLHIFIADVNRMCAN 429

Query: 103 AMQYNAPDTIYFRQARSI 120
           A  YN+ +TIYF+ A  +
Sbjct: 430 ARVYNSAETIYFKMANKL 447


>gi|383417737|gb|AFH32082.1| ATPase family AAA domain-containing protein 2 [Macaca mulatta]
          Length = 1380

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 1002 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1055


>gi|355698198|gb|EHH28746.1| ATPase family AAA domain-containing protein 2 [Macaca mulatta]
 gi|355779928|gb|EHH64404.1| ATPase family AAA domain-containing protein 2 [Macaca fascicularis]
          Length = 1389

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 1011 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1064


>gi|332214211|ref|XP_003256225.1| PREDICTED: ATPase family AAA domain-containing protein 2 [Nomascus
            leucogenys]
          Length = 1382

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 1005 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1058


>gi|24497618|ref|NP_054828.2| ATPase family AAA domain-containing protein 2 [Homo sapiens]
 gi|74762365|sp|Q6PL18.1|ATAD2_HUMAN RecName: Full=ATPase family AAA domain-containing protein 2; AltName:
            Full=AAA nuclear coregulator cancer-associated protein;
            Short=ANCCA
 gi|46947027|gb|AAT06746.1| L16 [Homo sapiens]
 gi|109730581|gb|AAI13657.1| ATPase family, AAA domain containing 2 [Homo sapiens]
 gi|119612441|gb|EAW92035.1| ATPase family, AAA domain containing 2, isoform CRA_c [Homo sapiens]
 gi|119612442|gb|EAW92036.1| ATPase family, AAA domain containing 2, isoform CRA_c [Homo sapiens]
          Length = 1390

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 1013 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1066


>gi|397499594|ref|XP_003820530.1| PREDICTED: ATPase family AAA domain-containing protein 2 [Pan
            paniscus]
          Length = 1387

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 1010 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1063


>gi|396483802|ref|XP_003841793.1| hypothetical protein LEMA_P097230.1 [Leptosphaeria maculans JN3]
 gi|312218368|emb|CBX98314.1| hypothetical protein LEMA_P097230.1 [Leptosphaeria maculans JN3]
          Length = 1151

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 3/77 (3%)

Query: 55  KMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF 114
           +++  E PDY  VI+HPMD GT+  KL    Y + ++F  D+ LI SN ++YNA D  +F
Sbjct: 348 RVNKREAPDYYNVIKHPMDIGTMMKKLKQLQYKSKKEFVDDLMLIWSNCLKYNA-DPSHF 406

Query: 115 RQARSIHELAKKNFENL 131
            + +++H   KK  E L
Sbjct: 407 LRKKALH--MKKETEKL 421


>gi|426334872|ref|XP_004028960.1| PREDICTED: ATPase family AAA domain-containing protein 2B [Gorilla
            gorilla gorilla]
          Length = 1453

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 982  VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1035


>gi|347441618|emb|CCD34539.1| hypothetical protein [Botryotinia fuckeliana]
          Length = 903

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 39/71 (54%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY EVI+ P  F TVR K+    Y + ++F +D  LI  NA  YN P    +  A ++
Sbjct: 125 LPDYFEVIKEPTAFSTVRQKILKKQYKSFKEFVRDFALISHNAQVYNRPSAAAYHDAIAL 184

Query: 121 HELAKKNFENL 131
            EL KK  + L
Sbjct: 185 RELFKKEMQQL 195


>gi|154293911|ref|XP_001547400.1| hypothetical protein BC1G_14027 [Botryotinia fuckeliana B05.10]
          Length = 905

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 39/71 (54%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY EVI+ P  F TVR K+    Y + ++F +D  LI  NA  YN P    +  A ++
Sbjct: 127 LPDYFEVIKEPTAFSTVRQKILKKQYKSFKEFVRDFALISHNAQVYNRPSAAAYHDAIAL 186

Query: 121 HELAKKNFENL 131
            EL KK  + L
Sbjct: 187 RELFKKEMQQL 197


>gi|355751145|gb|EHH55400.1| hypothetical protein EGM_04608 [Macaca fascicularis]
          Length = 1458

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 987  VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1040


>gi|332242898|ref|XP_003270617.1| PREDICTED: ATPase family AAA domain-containing protein 2B [Nomascus
            leucogenys]
          Length = 1458

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 987  VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1040


>gi|114576404|ref|XP_525707.2| PREDICTED: ATPase family AAA domain-containing protein 2B isoform 2
            [Pan troglodytes]
 gi|397513532|ref|XP_003827066.1| PREDICTED: ATPase family AAA domain-containing protein 2B [Pan
            paniscus]
 gi|410218724|gb|JAA06581.1| ATPase family, AAA domain containing 2B [Pan troglodytes]
 gi|410353103|gb|JAA43155.1| ATPase family, AAA domain containing 2B [Pan troglodytes]
          Length = 1458

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 987  VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1040


>gi|403288183|ref|XP_003935292.1| PREDICTED: ATPase family AAA domain-containing protein 2B [Saimiri
            boliviensis boliviensis]
          Length = 1458

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 987  VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1040


>gi|355565499|gb|EHH21928.1| hypothetical protein EGK_05102 [Macaca mulatta]
 gi|383411693|gb|AFH29060.1| ATPase family AAA domain-containing protein 2B isoform 1 [Macaca
            mulatta]
          Length = 1458

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 987  VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1040


>gi|350416103|ref|XP_003490841.1| PREDICTED: homeotic protein female sterile-like isoform 1 [Bombus
           impatiens]
          Length = 1486

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 41/71 (57%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY ++I+ PMD GTV+ K+ N  Y T ++F  DV LI +N  +YN PD      AR +
Sbjct: 445 LHDYHDIIKKPMDLGTVKTKMDNREYKTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKL 504

Query: 121 HELAKKNFENL 131
            ++ +  +  +
Sbjct: 505 QDVFEMRYAKI 515



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           LPDY ++I+ PMD GT++ +L N  Y + ++  +D   + +N   YN P  D +   QA
Sbjct: 102 LPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQA 160


>gi|449548376|gb|EMD39343.1| hypothetical protein CERSUDRAFT_112983 [Ceriporiopsis subvermispora
           B]
          Length = 1293

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 42/72 (58%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           ++PDY ++I HPM +  +  KL N  Y  L++ + D+ L+  NA+ YN P T ++R A+ 
Sbjct: 490 DVPDYYDIIRHPMCWSVIDRKLDNHEYLDLQELKDDILLVVDNAVTYNQPGTPFYRAAQR 549

Query: 120 IHELAKKNFENL 131
           I   A+    +L
Sbjct: 550 IKTAAEPILADL 561


>gi|114621556|ref|XP_001148894.1| PREDICTED: ATPase family AAA domain-containing protein 2 isoform 3
            [Pan troglodytes]
          Length = 1391

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 1014 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1067


>gi|426360620|ref|XP_004047534.1| PREDICTED: ATPase family AAA domain-containing protein 2 [Gorilla
            gorilla gorilla]
          Length = 1386

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 1009 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1062


>gi|426223198|ref|XP_004005764.1| PREDICTED: ATPase family AAA domain-containing protein 2B [Ovis
            aries]
          Length = 1458

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 987  VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1040


>gi|395817969|ref|XP_003782412.1| PREDICTED: ATPase family AAA domain-containing protein 2 isoform 1
            [Otolemur garnettii]
 gi|395817971|ref|XP_003782413.1| PREDICTED: ATPase family AAA domain-containing protein 2 isoform 2
            [Otolemur garnettii]
          Length = 1390

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 1011 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1064


>gi|390474727|ref|XP_003734834.1| PREDICTED: ATPase family AAA domain-containing protein 2B isoform 2
            [Callithrix jacchus]
          Length = 1472

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 1001 VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1054


>gi|198420090|ref|XP_002120918.1| PREDICTED: similar to ATPase family, AAA domain containing 2
           (predicted), partial [Ciona intestinalis]
          Length = 450

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +D EE+PDY +VIE+PMD  T+ NK+    Y  +  F  D+ L+CSNA++YN PD
Sbjct: 6   VDLEEVPDYADVIENPMDISTMMNKIDQHRYQNVALFLHDIGLVCSNALEYN-PD 59


>gi|391343564|ref|XP_003746079.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain and WD repeat-containing
            protein 3-like [Metaseiulus occidentalis]
          Length = 1820

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 34/51 (66%)

Query: 57   DPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYN 107
            D EE PDY E+I+ PMD  TV +KL NG Y T E F KD+ +I +N+  YN
Sbjct: 1356 DLEEFPDYAELIKTPMDLSTVSDKLTNGIYGTPEDFAKDMQIIFANSRTYN 1406



 Score = 45.4 bits (106), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 33/63 (52%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
            +D    P Y  V+ +PMD  T+R++L N  Y   E  + DV  I  NA ++N   +   +
Sbjct: 1189 VDLNSYPAYATVVAYPMDLTTIRSRLDNNFYRRKEGIKFDVSYIGYNAEKFNESSSAIVK 1248

Query: 116  QAR 118
            QAR
Sbjct: 1249 QAR 1251


>gi|332164670|ref|NP_001193679.1| ATPase family AAA domain-containing protein 2B [Bos taurus]
 gi|296482350|tpg|DAA24465.1| TPA: ATPase family AAA domain-containing protein 2B-like [Bos taurus]
          Length = 1458

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 987  VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1040


>gi|431911872|gb|ELK14016.1| ATPase family AAA domain-containing protein 2B [Pteropus alecto]
          Length = 1499

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 1018 VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1071


>gi|73979809|ref|XP_532888.2| PREDICTED: ATPase family AAA domain-containing protein 2B isoform 1
            [Canis lupus familiaris]
          Length = 1459

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 988  VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1041


>gi|410337293|gb|JAA37593.1| ATPase family, AAA domain containing 2 [Pan troglodytes]
          Length = 1391

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 1014 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1067


>gi|195437592|ref|XP_002066724.1| GK24409 [Drosophila willistoni]
 gi|194162809|gb|EDW77710.1| GK24409 [Drosophila willistoni]
          Length = 885

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y  +I  PMDF T+R K+ +  Y+ L +F  D   +C NA++YN  DT+Y + A+ + 
Sbjct: 318 PGYSSIITKPMDFSTMRQKIDDHDYSALNEFTDDFRRMCENAIRYNHVDTVYHKAAKRLL 377

Query: 122 ELAKKNF--ENL 131
           +L  K    ENL
Sbjct: 378 QLGIKYLQPENL 389


>gi|393215995|gb|EJD01486.1| hypothetical protein FOMMEDRAFT_147985 [Fomitiporia mediterranea
           MF3/22]
          Length = 516

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 49/78 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           + P E PDY ++++ PMD  T++N++ +G   T  ++++D++L+ +N++ YN P++  + 
Sbjct: 429 IKPSEAPDYYDIVKRPMDLKTIKNRVRDGRITTSTEYQRDIYLMFANSLMYNRPNSDIYM 488

Query: 116 QARSIHELAKKNFENLRQ 133
            A  +   ++   +N +Q
Sbjct: 489 MAEEMMLDSEAEIQNFQQ 506


>gi|123456570|ref|XP_001316019.1| Bromodomain containing protein [Trichomonas vaginalis G3]
 gi|121898714|gb|EAY03796.1| Bromodomain containing protein [Trichomonas vaginalis G3]
          Length = 146

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 35/47 (74%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYN 107
           +PDY +VI++P DF TVRNKL    Y T ++F++DV LI  NA+QYN
Sbjct: 38  VPDYYDVIKNPSDFSTVRNKLTTFQYKTFDEFKRDVNLIWENAIQYN 84


>gi|52545805|emb|CAH56229.1| hypothetical protein [Homo sapiens]
          Length = 1344

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 967  VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1020


>gi|452824225|gb|EME31229.1| hypothetical protein Gasu_14720 [Galdieria sulphuraria]
          Length = 434

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 42/70 (60%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E P+Y ++I +PMD  T+R KL  G Y + + F +D+ LIC NA  YNA ++  ++ A  
Sbjct: 175 EAPNYYDIITNPMDLSTMRKKLDQGVYRSPQDFLQDLHLICENAFCYNAKNSEVYKLAEE 234

Query: 120 IHELAKKNFE 129
           + +  KK  E
Sbjct: 235 LKKRIKKLME 244


>gi|402890216|ref|XP_003908386.1| PREDICTED: ATPase family AAA domain-containing protein 2B [Papio
           anubis]
          Length = 1390

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 919 VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 972


>gi|296224389|ref|XP_002758042.1| PREDICTED: ATPase family AAA domain-containing protein 2B isoform 1
            [Callithrix jacchus]
          Length = 1458

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 987  VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1040


>gi|307180267|gb|EFN68300.1| Protein polybromo-1 [Camponotus floridanus]
          Length = 1644

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 47/74 (63%), Gaps = 2/74 (2%)

Query: 52  IDFKMDPEE--LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
           I F++ P +   P+Y +VIE P+D  T+  K+  GAY+++   EKD+ L+C NA Q+N P
Sbjct: 211 IMFQLKPSKKLYPEYYDVIETPIDLKTIARKIQEGAYSSVGDMEKDLMLMCRNACQFNEP 270

Query: 110 DTIYFRQARSIHEL 123
            +  ++ A+ + ++
Sbjct: 271 GSQIYKDAKLLKKI 284



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 40/77 (51%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E PDY EVI+ P+    + + L N  Y  L++   D  L+  NA +YN PD+  ++ A  
Sbjct: 665 EYPDYYEVIKQPIHMEKIASILKNNGYENLDELVSDFILMFDNACKYNEPDSQIYKDALI 724

Query: 120 IHELAKKNFENLRQDSD 136
           +  L  ++   L +D +
Sbjct: 725 LQRLVLQSKLQLSEDEE 741



 Score = 42.4 bits (98), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 42/84 (50%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y EV+ +P+D   V+ KL    Y  ++    D+ L+ +NA  +    +  ++ A  + 
Sbjct: 71  PGYYEVVSNPIDLLKVQQKLKTDEYRDMDDLAADIQLMVNNAKAFYMRTSPEYKDATELW 130

Query: 122 ELAKKNFENLRQDSDDNEPETKVV 145
           EL       + ++ +D EP+ K++
Sbjct: 131 ELCINTKNRITEEYEDPEPKGKLI 154



 Score = 42.0 bits (97), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 17/70 (24%), Positives = 39/70 (55%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           PDY ++I++P+    +R K+  G Y T+ +   D+ ++  NA +YN   +  ++ A  + 
Sbjct: 386 PDYYKMIKNPISLLQIRTKIKKGEYGTVSEVAGDMNIMFENAKKYNIHTSRLYKCAVKLQ 445

Query: 122 ELAKKNFENL 131
           ++ ++  + L
Sbjct: 446 KIMQEKVQEL 455


>gi|297265532|ref|XP_002799198.1| PREDICTED: ATPase family AAA domain-containing protein 2B-like
            [Macaca mulatta]
          Length = 1421

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 950  VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1003


>gi|443717125|gb|ELU08320.1| hypothetical protein CAPTEDRAFT_221993 [Capitella teleta]
          Length = 1688

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 46/80 (57%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           ELPDY EVI+ P+D   V  K++N  Y ++E+   D  L+  NA +YN P+++ ++ A +
Sbjct: 752 ELPDYYEVIKKPIDMNRVWQKISNKHYTSVEELTSDFVLMFDNACKYNEPESLIYKDALT 811

Query: 120 IHELAKKNFENLRQDSDDNE 139
           +  +  +  + L  D D  E
Sbjct: 812 LQRVCLEKKQELCADDDTRE 831



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           PDY + I+ P+    ++ ++ N  Y  L+Q   D+ L+  NA+ YN  D+   + A ++H
Sbjct: 475 PDYYDDIKRPISLLKIQRQIKNERYKDLDQMYVDLKLMFDNAIMYNVEDSQIHKDANTLH 534

Query: 122 ELAKKNFENLRQDSD 136
           EL K     L+Q  D
Sbjct: 535 ELVKAKLAELQQTRD 549



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 3/78 (3%)

Query: 48  CSSSIDFKMDPE--ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQ 105
           C S + FK+ P   + P Y E+I+ P+D   +  ++ +G YATL+   +D+ L+ SNA  
Sbjct: 273 CVSDM-FKVLPSRGKFPMYFEIIKDPIDLRMIAQRMQSGDYATLDDLVRDLNLMVSNARN 331

Query: 106 YNAPDTIYFRQARSIHEL 123
           +N P +  +R A ++ ++
Sbjct: 332 FNEPGSQIYRDAGTLRKI 349


>gi|440906079|gb|ELR56384.1| ATPase family AAA domain-containing protein 2B [Bos grunniens mutus]
          Length = 1458

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 987  VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1040


>gi|348563281|ref|XP_003467436.1| PREDICTED: LOW QUALITY PROTEIN: ATPase family AAA domain-containing
            protein 2-like [Cavia porcellus]
          Length = 1387

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 1010 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1063


>gi|334185652|ref|NP_001189985.1| global transcription factor group E8 [Arabidopsis thaliana]
 gi|332643764|gb|AEE77285.1| global transcription factor group E8 [Arabidopsis thaliana]
          Length = 764

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 33/49 (67%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
           +PDY   I+HPMD GTV+  LA+G Y++  +F  DV L  +NAM YN P
Sbjct: 158 IPDYLTTIKHPMDLGTVKKNLASGVYSSPHEFAADVRLTFTNAMTYNPP 206


>gi|167381013|ref|XP_001735535.1| bromodomain-containing factor [Entamoeba dispar SAW760]
 gi|165902414|gb|EDR28252.1| bromodomain-containing factor, putative [Entamoeba dispar SAW760]
          Length = 388

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 4/72 (5%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           ++P Y  VI+ PMD GT+++ L++  Y T E+F+ D+ L+  NA+ +N PD+  +  A  
Sbjct: 129 QVPTYFSVIKRPMDLGTIKHNLSDKKYITKEEFQADMLLVFDNALLFNHPDSEVYHWAVK 188

Query: 120 IHELAKKNFENL 131
           +    KK FE L
Sbjct: 189 L----KKQFETL 196


>gi|19171509|emb|CAC84085.1| hypothetical protein [Takifugu rubripes]
          Length = 701

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 40/72 (55%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           EL DY ++I+HPMD  T+R K+  G Y   + F  DV L+ SN  +YN PD      AR 
Sbjct: 329 ELHDYHDIIKHPMDLSTIRKKMDKGEYNEPQSFATDVRLMFSNCYKYNPPDHEVVAMARK 388

Query: 120 IHELAKKNFENL 131
           + ++ +  F  +
Sbjct: 389 LQDVFEMRFAKI 400



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           L DY +VI++PMD GT++ +L N  Y +  +  +D   + +N   YN P  D +   QA
Sbjct: 67  LADYHKVIKNPMDMGTIKKRLENNYYWSASEAMQDFNTMFTNCYIYNKPTDDIVLMAQA 125


>gi|9294219|dbj|BAB02121.1| unnamed protein product [Arabidopsis thaliana]
          Length = 818

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 33/49 (67%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
           +PDY   I+HPMD GTV+  LA+G Y++  +F  DV L  +NAM YN P
Sbjct: 207 IPDYLTTIKHPMDLGTVKKNLASGVYSSPHEFAADVRLTFTNAMTYNPP 255


>gi|391326863|ref|XP_003737929.1| PREDICTED: protein polybromo-1-like [Metaseiulus occidentalis]
          Length = 1684

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 3/79 (3%)

Query: 54  FKMDP--EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDT 111
           FK+ P   + PDY +VI+ P+D  T+   +    Y++L + EKDV L+C NA  YN P +
Sbjct: 181 FKILPSKRDYPDYYQVIKEPIDLRTIAQNIQEDNYSSLSELEKDVVLMCKNAKTYNEPGS 240

Query: 112 IYFRQARSIHELAK-KNFE 129
             +R A  I +L K + FE
Sbjct: 241 DIYRDAAFIQKLVKGRRFE 259



 Score = 47.0 bits (110), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%)

Query: 55  KMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF 114
           K DP+E PDY EVI  P+D   +  ++ N  Y   EQ   D   +  N   YN  ++  F
Sbjct: 512 KPDPQEYPDYYEVIHKPIDMQLIYERIRNLRYQNPEQCVADFRQMFENCRTYNEENSQIF 571

Query: 115 RQARSIHELAKKNFENL 131
           + A ++ ++ +   E L
Sbjct: 572 QDANTLEQVLQARIEEL 588



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 35/59 (59%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           P+Y +VI+ P+DF  ++ K+ +  Y T+++F +D+ L+  NA  Y   D+  +  A  I
Sbjct: 69  PNYTDVIKDPIDFSRIQQKIRSDEYNTVDEFAQDIQLMVENAKTYYKKDSQEYADAVEI 127



 Score = 43.1 bits (100), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 1/85 (1%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           PDY   I  PM F  V   L    Y  ++    DV LI  NA  +N PD+  F+ A ++ 
Sbjct: 375 PDYHAEISKPMSFRKVVTNLLKNKYRFVKDVVADVELIFKNAKVFNRPDSKVFQDAATLL 434

Query: 122 ELAKKNFENLRQDSDDNEPETKVVR 146
            +     + L QD++ N  E KV R
Sbjct: 435 RVVHAKVKGL-QDANPNVLEMKVPR 458



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 59  EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
           ++ P+Y +VI+ P+D   ++ KL   +Y TL+   +D+ L+  NA  YN PD+  ++ A 
Sbjct: 647 QDYPEYYDVIKEPIDLEIIKQKLGKNSYETLDDILQDLLLMFDNACTYNEPDSQLYKDAL 706

Query: 119 SIHELA-KKNFENLRQDSDDNEPETKVV 145
            + ++A +   E    D +D  P+ K V
Sbjct: 707 LLRKVALQTKLELGAADLEDGVPDVKGV 734


>gi|238481625|ref|NP_001154792.1| nuclear protein X1 [Arabidopsis thaliana]
 gi|238481627|ref|NP_001154793.1| nuclear protein X1 [Arabidopsis thaliana]
 gi|10177441|dbj|BAB10737.1| unnamed protein product [Arabidopsis thaliana]
 gi|50253452|gb|AAT71928.1| At5g63330 [Arabidopsis thaliana]
 gi|60543335|gb|AAX22265.1| At5g63330 [Arabidopsis thaliana]
 gi|332010350|gb|AED97733.1| nuclear protein X1 [Arabidopsis thaliana]
 gi|332010351|gb|AED97734.1| nuclear protein X1 [Arabidopsis thaliana]
          Length = 477

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY  VI+HPMD GT+R++L  G Y++   F  DV L  SN++ YN P   +   A+ I
Sbjct: 192 IPDYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGI 251

Query: 121 HELAKKNFENLRQ 133
            +  +  ++++ +
Sbjct: 252 SKYFESGWKSIEK 264


>gi|116205473|ref|XP_001228547.1| hypothetical protein CHGG_10620 [Chaetomium globosum CBS 148.51]
 gi|88176748|gb|EAQ84216.1| hypothetical protein CHGG_10620 [Chaetomium globosum CBS 148.51]
          Length = 941

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%)

Query: 40  LYQIKSYCCSSSIDFKMDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           L + K Y  +++    +DP  L  P Y ++I+ PMD  T+ NKL +G Y + ++FEKD  
Sbjct: 541 LRKTKHYDINAAFMQPVDPVALNIPHYHKIIKKPMDLQTMSNKLGSGEYQSSKEFEKDFD 600

Query: 98  LICSNAMQYNAPDTIYFRQARSIHEL 123
           LI  N   +N  D + + QA  + +L
Sbjct: 601 LIIKNCKTFNGEDHVVYSQALRLQDL 626


>gi|15232127|ref|NP_189362.1| global transcription factor group E8 [Arabidopsis thaliana]
 gi|327488239|sp|Q9LK27.2|GTE8_ARATH RecName: Full=Transcription factor GTE8; AltName:
           Full=Bromodomain-containing protein GTE8; AltName:
           Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E8
 gi|332643763|gb|AEE77284.1| global transcription factor group E8 [Arabidopsis thaliana]
          Length = 813

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 33/49 (67%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
           +PDY   I+HPMD GTV+  LA+G Y++  +F  DV L  +NAM YN P
Sbjct: 207 IPDYLTTIKHPMDLGTVKKNLASGVYSSPHEFAADVRLTFTNAMTYNPP 255


>gi|47208417|emb|CAF92198.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1579

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 5/92 (5%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY ++I+HPMD  T++ KL N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 473 LHDYHDIIKHPMDLSTIKVKLENRQYREPQEFAADVRLMFSNCYKYNPPDHEVVAMARKL 532

Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGRPPT 152
            ++ +  F  +      +EPE K +     PT
Sbjct: 533 QDVFEMRFAKM-----PDEPEGKSLVSAPAPT 559



 Score = 43.5 bits (101), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)

Query: 42  QIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICS 101
           Q K Y     ++ +M  + L DY  +I+ PMD GT++ +L N  Y   ++  +D   + +
Sbjct: 90  QYKYYTQFCEVNCQM--QSLQDYYTIIKTPMDMGTIKKRLENSYYWNAQECIQDFNTMFT 147

Query: 102 NAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVV 145
           N   YN P       A ++ ++  +    + Q+      ET++V
Sbjct: 148 NCYIYNKPGDDIVLMAEALEKVFLQKVTEMPQE------ETEIV 185


>gi|301756066|ref|XP_002913883.1| PREDICTED: ATPase family AAA domain-containing protein 2B-like
           [Ailuropoda melanoleuca]
          Length = 1395

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 924 VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 977


>gi|154413424|ref|XP_001579742.1| Bromodomain containing protein [Trichomonas vaginalis G3]
 gi|121913952|gb|EAY18756.1| Bromodomain containing protein [Trichomonas vaginalis G3]
          Length = 228

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)

Query: 40  LYQIKSYCCSSSIDFKMDPEE--LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           + +I+S+  S      +DPE    PDY + I+ PMD GTV+NKL +  Y  +++++ DV 
Sbjct: 13  MTKIRSHPISEMFLEPVDPERDGAPDYFKQIKKPMDLGTVQNKLNSRTYKNVQEWKDDVN 72

Query: 98  LICSNAMQYNAPDTIYFRQARSIHELAKK 126
           LIC+NA+QYN   +     A  I ++ K+
Sbjct: 73  LICTNAIQYNGKKSYIGAVATEISKIFKE 101


>gi|338714114|ref|XP_001501559.3| PREDICTED: LOW QUALITY PROTEIN: ATPase family AAA domain-containing
            protein 2B-like [Equus caballus]
          Length = 1448

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 977  VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1030


>gi|410955754|ref|XP_003984515.1| PREDICTED: ATPase family AAA domain-containing protein 2B [Felis
            catus]
          Length = 1498

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 1073 VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1126


>gi|281344996|gb|EFB20580.1| hypothetical protein PANDA_001711 [Ailuropoda melanoleuca]
          Length = 1374

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 916 VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 969


>gi|169730373|gb|ACA64774.1| bromodomain-containing protein 2 [Meleagris gallopavo]
          Length = 779

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+HPMD  T++ K+ N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 380 LHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 439

Query: 121 HELAKKNFENLRQDSDDNEP 140
            ++ + ++  +  +  D  P
Sbjct: 440 QDVFEFSYAKMPDEPQDASP 459



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y    +  +D   + +N   YN P       A+++
Sbjct: 109 LPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTL 168

Query: 121 HEL 123
            ++
Sbjct: 169 EKI 171


>gi|308460041|ref|XP_003092329.1| CRE-TAG-298 protein [Caenorhabditis remanei]
 gi|308253560|gb|EFO97512.1| CRE-TAG-298 protein [Caenorhabditis remanei]
          Length = 644

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 40/67 (59%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y ++I  PMD  T+R K+ +G Y +L   ++D  LI +NA+QYN P T+++  A+ + 
Sbjct: 181 PGYSQIITKPMDMQTIREKIEDGLYPSLPLMKEDAQLIVANALQYNQPTTVFYLAAKRLS 240

Query: 122 ELAKKNF 128
            L    F
Sbjct: 241 NLIAYYF 247


>gi|255721897|ref|XP_002545883.1| histone acetyltransferase GCN5 [Candida tropicalis MYA-3404]
 gi|240136372|gb|EER35925.1| histone acetyltransferase GCN5 [Candida tropicalis MYA-3404]
          Length = 310

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 39/68 (57%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++ EE+PDY EVI+ PMD  T+ +KL N  Y + +QF  D  LI  N   YN   T Y++
Sbjct: 226 VNKEEVPDYYEVIKEPMDLSTMESKLENDKYESFDQFLYDARLIYKNCRSYNGETTTYYK 285

Query: 116 QARSIHEL 123
            A  + + 
Sbjct: 286 NANKLEKF 293


>gi|395828867|ref|XP_003787584.1| PREDICTED: ATPase family AAA domain-containing protein 2B [Otolemur
            garnettii]
          Length = 1486

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 1016 VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1069


>gi|71020763|ref|XP_760612.1| hypothetical protein UM04465.1 [Ustilago maydis 521]
 gi|46100500|gb|EAK85733.1| hypothetical protein UM04465.1 [Ustilago maydis 521]
          Length = 803

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 16/135 (11%)

Query: 15  ERRLFLVRIQQITTKGLSWNWDPQRLYQIKSYC-CSSSIDFKMDPEELPDYCEVIEHPMD 73
           ER  FL  I +I T             ++K+Y   S++   K+   + PDY +VI+HPMD
Sbjct: 35  EREEFLESIDRIIT-------------ELKNYTEHSTAFLSKVSKRDAPDYYDVIKHPMD 81

Query: 74  FGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQ 133
            GT++ K+ +G Y   +QF  D+ LI  N + YN+  T   R  R++  + KK    L  
Sbjct: 82  LGTMQKKVKSGQYKNKKQFAHDLNLIWENCLLYNSDPTHPLR--RNVAFMRKKADHLLEF 139

Query: 134 DSDDNEPETKVVRRG 148
            SD ++ +  +V+ G
Sbjct: 140 ISDKSDVKDALVQWG 154


>gi|451855610|gb|EMD68902.1| hypothetical protein COCSADRAFT_23288 [Cochliobolus sativus ND90Pr]
          Length = 1139

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 3/92 (3%)

Query: 40  LYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLI 99
           L ++K+   +     +++  E PDY  +I+HPMD GT+  KL    Y + ++F  D+ LI
Sbjct: 341 LMELKANEHAHPFLQRVNKREAPDYYNIIKHPMDIGTMMKKLKQLQYKSKKEFVDDLMLI 400

Query: 100 CSNAMQYNAPDTIYFRQARSIHELAKKNFENL 131
            SN ++YNA D  +F + +++H   KK  E L
Sbjct: 401 WSNCLKYNA-DPSHFLRKKALH--MKKETEKL 429


>gi|123472046|ref|XP_001319219.1| Bromodomain containing protein [Trichomonas vaginalis G3]
 gi|121901997|gb|EAY06996.1| Bromodomain containing protein [Trichomonas vaginalis G3]
          Length = 219

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 49/72 (68%)

Query: 55  KMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF 114
           K++ +E+P+Y + +  PMDF T+R +L++G Y T+ ++ +D+ L+  NAM+Y+  D++++
Sbjct: 27  KLNKDEVPNYDKYVSMPMDFETIRTRLSDGTYKTMTEWYRDMALVFENAMKYHPEDSVWY 86

Query: 115 RQARSIHELAKK 126
           + A     + KK
Sbjct: 87  KIAEYDLSIFKK 98


>gi|344258958|gb|EGW15062.1| Bromodomain-containing protein 9 [Cricetulus griseus]
          Length = 417

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 35/49 (71%)

Query: 72  MDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           MDFGT+++K+    Y ++ +F+ D  L+C NAM YN PDT+Y++ A+ I
Sbjct: 1   MDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 49


>gi|320580948|gb|EFW95170.1| histone acetyltransferase GCN5 [Ogataea parapolymorpha DL-1]
          Length = 426

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 40/65 (61%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++ +E+PDY EVI+ PMD  T+  KL N AY T + F  D  LI +N  QYN  +T +++
Sbjct: 339 VNKDEVPDYYEVIKEPMDLSTMEVKLENDAYETFDDFIYDCKLIFNNCRQYNGDNTTFYK 398

Query: 116 QARSI 120
            A  +
Sbjct: 399 NANKL 403


>gi|384254936|gb|AFH75302.1| BRD2 [Lyrurus tetrix]
          Length = 779

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+HPMD  T++ K+ N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 380 LHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 439

Query: 121 HELAKKNFENLRQDSDDNEP 140
            ++ + ++  +  +  D  P
Sbjct: 440 QDVFEFSYAKMPDEPQDASP 459



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y    +  +D   + +N   YN P       A+++
Sbjct: 109 LPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTL 168

Query: 121 HEL 123
            ++
Sbjct: 169 EKI 171


>gi|357134548|ref|XP_003568879.1| PREDICTED: transcription factor GTE8-like, partial [Brachypodium
           distachyon]
          Length = 574

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 34/49 (69%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
           +PDY +VI +PMD GTV+ KL N  Y + ++F  DV L  SNAM+YN P
Sbjct: 93  IPDYFDVIRNPMDLGTVKKKLTNKNYPSTDEFAADVRLTFSNAMKYNPP 141


>gi|71897271|ref|NP_001025845.1| bromodomain-containing protein 2 [Gallus gallus]
 gi|1370092|emb|CAA65449.1| kinase [Gallus gallus]
          Length = 729

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+HPMD  T++ K+ N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 330 LHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 389

Query: 121 HELAKKNFENLRQDSDDNEP 140
            ++ + ++  +  +  D  P
Sbjct: 390 QDVFEFSYAKMPDEPQDASP 409



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y    +  +D   + +N   YN P       A+++
Sbjct: 63  LPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTL 122

Query: 121 HEL 123
            ++
Sbjct: 123 EKI 125


>gi|350582670|ref|XP_003125398.3| PREDICTED: LOW QUALITY PROTEIN: ATPase family AAA domain-containing
           protein 2B [Sus scrofa]
          Length = 1352

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 881 VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 934


>gi|348670178|gb|EGZ10000.1| hypothetical protein PHYSODRAFT_338700 [Phytophthora sojae]
          Length = 1165

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 4/79 (5%)

Query: 58  PEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
           P+++P Y E+I+ PMD  T+R K   G Y TL+ F  D  L+  N M +N   TI++++ 
Sbjct: 460 PDDVPKYREIIKDPMDLSTMRKKAKRGKYKTLDSFVADFNLMIRNCMTFNPDTTIFYKEG 519

Query: 118 RSI----HELAKKNFENLR 132
           + I    +EL +++  +LR
Sbjct: 520 KRIGKRGNELIERHATSLR 538


>gi|443611854|gb|AGC96178.1| bromodomain-containing protein 2 [Tympanuchus cupido]
          Length = 779

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+HPMD  T++ K+ N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 380 LHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 439

Query: 121 HELAKKNFENLRQDSDDNEP 140
            ++ + ++  +  +  D  P
Sbjct: 440 QDVFEFSYAKMPDEPQDASP 459



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y    +  +D   + +N   YN P       A+++
Sbjct: 109 LPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTL 168

Query: 121 HEL 123
            ++
Sbjct: 169 EKI 171


>gi|34392374|dbj|BAC82511.1| Serine threonine Kinase [Coturnix japonica]
          Length = 735

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+HPMD  T++ K+ N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 334 LHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 393

Query: 121 HELAKKNFENLRQDSDDNEP 140
            ++ + ++  +  +  D  P
Sbjct: 394 QDVFEFSYAKMPDEPQDASP 413



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y    +  +D   + +N   YN P       A+++
Sbjct: 63  LPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTL 122

Query: 121 HEL 123
            ++
Sbjct: 123 EKI 125


>gi|332887140|dbj|BAJ53019.2| Bromodomain-containing protein 2 precursor [Gallus gallus]
          Length = 733

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+HPMD  T++ K+ N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 334 LHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 393

Query: 121 HELAKKNFENLRQDSDDNEP 140
            ++ + ++  +  +  D  P
Sbjct: 394 QDVFEFSYAKMPDEPQDASP 413



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y    +  +D   + +N   YN P       A+++
Sbjct: 63  LPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTL 122

Query: 121 HEL 123
            ++
Sbjct: 123 EKI 125


>gi|197304453|dbj|BAG69393.1| bromodomain-containing protein 2 precursor [Gallus gallus]
          Length = 733

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+HPMD  T++ K+ N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 334 LHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 393

Query: 121 HELAKKNFENLRQDSDDNEP 140
            ++ + ++  +  +  D  P
Sbjct: 394 QDVFEFSYAKMPDEPQDASP 413



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y    +  +D   + +N   YN P       A+++
Sbjct: 63  LPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTL 122

Query: 121 HEL 123
            ++
Sbjct: 123 EKI 125


>gi|148356975|dbj|BAF62999.1| Bromodomain-containing protein 2 precursor [Gallus gallus]
 gi|197304348|dbj|BAG69295.1| bromodomain-containing protein 2 precursor [Gallus gallus]
 gi|197304378|dbj|BAG69323.1| bromodomain-containing protein 2 precursor [Gallus gallus]
 gi|197304408|dbj|BAG69351.1| bromodomain-containing protein 2 precursor [Gallus gallus]
 gi|197304468|dbj|BAG69407.1| bromodomain-containing protein 2 precursor [Gallus gallus]
 gi|197304482|dbj|BAG69420.1| bromodomain-containing protein 2 precursor [Gallus gallus]
 gi|197304512|dbj|BAG69448.1| bromodomain-containing protein 2 precursor [Gallus gallus]
 gi|197304526|dbj|BAG69461.1| bromodomain-containing protein 2 precursor [Gallus gallus]
 gi|261863985|gb|ACY01481.1| bromodomain-containing protein 2 precursor [Gallus gallus]
 gi|261863995|gb|ACY01490.1| bromodomain-containing protein 2 precursor [Gallus gallus]
          Length = 733

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+HPMD  T++ K+ N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 334 LHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 393

Query: 121 HELAKKNFENLRQDSDDNEP 140
            ++ + ++  +  +  D  P
Sbjct: 394 QDVFEFSYAKMPDEPQDASP 413



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y    +  +D   + +N   YN P       A+++
Sbjct: 63  LPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTL 122

Query: 121 HEL 123
            ++
Sbjct: 123 EKI 125


>gi|326487788|dbj|BAK05566.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 193

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 2/56 (3%)

Query: 56  MDPE--ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
           +DP+   +PDY +VI +PMD GTV+ KL N +Y + + F  DV L  SNAM YN P
Sbjct: 104 VDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 159


>gi|68488741|ref|XP_711796.1| likely histone acetyltransferase Gcn5 [Candida albicans SC5314]
 gi|68488778|ref|XP_711778.1| likely histone acetyltransferase Gcn5 [Candida albicans SC5314]
 gi|46433102|gb|EAK92556.1| likely histone acetyltransferase Gcn5 [Candida albicans SC5314]
 gi|46433121|gb|EAK92574.1| likely histone acetyltransferase Gcn5 [Candida albicans SC5314]
          Length = 449

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 52/102 (50%)

Query: 22  RIQQITTKGLSWNWDPQRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKL 81
           ++ Q   +G  +N+      +I+++  +      ++ EE+PDY  VIEHP+D  T+  KL
Sbjct: 337 KLAQKPKRGPHYNFMVTLFSEIQNHPSAWPFAVAVNKEEVPDYYRVIEHPIDLATIEQKL 396

Query: 82  ANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHEL 123
            N  Y     F  D+ L+ +N   YN+  T Y++ A  + + 
Sbjct: 397 ENNLYLKFTDFVDDLKLMFNNCRAYNSETTTYYKNANKLEKF 438


>gi|330805674|ref|XP_003290804.1| hypothetical protein DICPUDRAFT_12366 [Dictyostelium purpureum]
 gi|325079051|gb|EGC32671.1| hypothetical protein DICPUDRAFT_12366 [Dictyostelium purpureum]
          Length = 90

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 10/76 (13%)

Query: 55  KMDPEEL----------PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAM 104
           K DP +L          PDY   I+ PMDF T+  K  +G Y +++ F  D  LIC N M
Sbjct: 13  KKDPHQLFYSPVTEEIAPDYFTYIKKPMDFSTMIKKNNDGKYISIDLFTYDFTLICENCM 72

Query: 105 QYNAPDTIYFRQARSI 120
           +YN  +++Y++ AR +
Sbjct: 73  KYNDANSVYYKDARKL 88


>gi|241958932|ref|XP_002422185.1| subunit of histone acetyltransferase complex, putative [Candida
           dubliniensis CD36]
 gi|223645530|emb|CAX40189.1| subunit of histone acetyltransferase complex, putative [Candida
           dubliniensis CD36]
          Length = 451

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 52/102 (50%)

Query: 22  RIQQITTKGLSWNWDPQRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKL 81
           ++ Q   +G  +N+      +I+++  +      ++ EE+PDY  VIEHP+D  T+  KL
Sbjct: 339 KLAQKPKRGPHYNFMVTLFSEIQNHPSAWPFAVAVNKEEVPDYYRVIEHPIDLATIEQKL 398

Query: 82  ANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHEL 123
            N  Y     F  D+ L+ +N   YN+  T Y++ A  + + 
Sbjct: 399 ENNLYLKFTDFVDDLKLMFNNCRAYNSETTTYYKNANKLEKF 440


>gi|7512236|pir||T28145 RING3 kinase - chicken
 gi|3129967|emb|CAA18965.1| RING3 kinase [synthetic construct]
 gi|197304363|dbj|BAG69309.1| bromodomain-containing protein 2 precursor [Gallus gallus]
 gi|197304393|dbj|BAG69337.1| bromodomain-containing protein 2 precursor [Gallus gallus]
 gi|197304423|dbj|BAG69365.1| bromodomain-containing protein 2 precursor [Gallus gallus]
 gi|197304438|dbj|BAG69379.1| bromodomain-containing protein 2 precursor [Gallus gallus]
 gi|197304497|dbj|BAG69434.1| bromodomain-containing protein 2 precursor [Gallus gallus]
          Length = 733

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+HPMD  T++ K+ N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 334 LHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 393

Query: 121 HELAKKNFENLRQDSDDNEP 140
            ++ + ++  +  +  D  P
Sbjct: 394 QDVFEFSYAKMPDEPQDASP 413



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y    +  +D   + +N   YN P       A+++
Sbjct: 63  LPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTL 122

Query: 121 HEL 123
            ++
Sbjct: 123 EKI 125


>gi|378734234|gb|EHY60693.1| bromodomain-containing protein [Exophiala dermatitidis NIH/UT8656]
          Length = 968

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 73/172 (42%), Gaps = 17/172 (9%)

Query: 40  LYQIKSYCCSSSIDFKMDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           +  +K    S++    +DP  L  P Y EVI+HPMD GT+  +L    Y ++  F  D  
Sbjct: 413 ISNLKKSNASAAFRLPVDPVALNIPTYFEVIKHPMDLGTIDQRLKRNEYTSVAAFISDFE 472

Query: 98  LICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEP-ETKVVRRGRPPTKNFK 156
           LI  N +++N PD    + AR +         NL + S +  P + K   +   PT+   
Sbjct: 473 LIVDNCVKFNGPDHGVTQAARKMQSSFNSQMRNLPKASIEEPPKDNKKAAKKLEPTRT-- 530

Query: 157 KPLGRPSLERARSDFSSDVT----------LASGAENTALTNRD--LGNGTP 196
            P  RPS+       +S  T           A G +   L  RD  L +G P
Sbjct: 531 APPRRPSVSTTSHAPASHPTPKASAPPTPSFAPGPDGIPLIRRDSTLADGRP 582



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 36/68 (52%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +P Y ++I+ PMD GT+R KL N  Y   + FE+DV L+  N  ++N    +       +
Sbjct: 642 IPTYFQIIKKPMDLGTIRTKLNNNVYEKAKDFEEDVRLVFKNCYKFNPEGDLVNSAGHQL 701

Query: 121 HELAKKNF 128
            EL  K +
Sbjct: 702 EELFNKKW 709


>gi|393244892|gb|EJD52403.1| hypothetical protein AURDEDRAFT_55704 [Auricularia delicata
           TFB-10046 SS5]
          Length = 391

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 49/79 (62%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++ EE+ DY +VI++PMDF  + +KL +  Y+T++ F  D  LI SN + YN  +TIY +
Sbjct: 312 VNREEVVDYYDVIKNPMDFSLMEHKLEHHRYSTIDDFVADCQLIFSNCLTYNPENTIYVK 371

Query: 116 QARSIHELAKKNFENLRQD 134
            A  + +  +   + ++Q+
Sbjct: 372 CALVMRKFVETQLQQIQQE 390


>gi|240256475|ref|NP_201137.5| nuclear protein X1 [Arabidopsis thaliana]
 gi|327488242|sp|Q9FGW9.2|GTE10_ARATH RecName: Full=Transcription factor GTE10; AltName:
           Full=Bromodomain-containing protein GTE10; AltName:
           Full=Nuclear protein X1; AltName: Full=Protein GLOBAL
           TRANSCRIPTION FACTOR GROUP E10
 gi|332010349|gb|AED97732.1| nuclear protein X1 [Arabidopsis thaliana]
          Length = 1061

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 37/60 (61%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY  VI+HPMD GT+R++L  G Y++   F  DV L  SN++ YN P   +   A+ I
Sbjct: 192 IPDYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGI 251


>gi|197304540|dbj|BAG69474.1| bromodomain-containing protein 2 precursor [Gallus gallus]
          Length = 733

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+HPMD  T++ K+ N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 334 LHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 393

Query: 121 HELAKKNFENLRQDSDDNEP 140
            ++ + ++  +  +  D  P
Sbjct: 394 QDVFEFSYAKMPDEPQDASP 413



 Score = 42.7 bits (99), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y    +  +D   + +N   YN P       A+++
Sbjct: 63  LPDYHKIIKLPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTL 122

Query: 121 HEL 123
            ++
Sbjct: 123 EKI 125


>gi|134117033|ref|XP_772743.1| hypothetical protein CNBK1170 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255361|gb|EAL18096.1| hypothetical protein CNBK1170 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 765

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 44  KSYCCSSSIDFKMDP--EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICS 101
           K Y   S   + +D   EE+PDY  VI+ P+DF  ++NKLA   Y  + Q + D+ L+ +
Sbjct: 417 KYYVAVSPFLYPVDKIIEEVPDYATVIKRPIDFNIIKNKLAENTYEDVNQVDDDIRLMVA 476

Query: 102 NAMQYNAP 109
           NA ++N P
Sbjct: 477 NAQKFNPP 484


>gi|238880085|gb|EEQ43723.1| histone acetyltransferase GCN5 [Candida albicans WO-1]
          Length = 449

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 52/102 (50%)

Query: 22  RIQQITTKGLSWNWDPQRLYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKL 81
           ++ Q   +G  +N+      +I+++  +      ++ EE+PDY  VIEHP+D  T+  KL
Sbjct: 337 KLAQKPKRGPHYNFMVTLFSEIQNHPSAWPFAVAVNKEEVPDYYRVIEHPIDLATIEQKL 396

Query: 82  ANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHEL 123
            N  Y     F  D+ L+ +N   YN+  T Y++ A  + + 
Sbjct: 397 ENNLYLKFTDFVDDLKLMFNNCRAYNSETTTYYKNANKLEKF 438


>gi|156039755|ref|XP_001586985.1| hypothetical protein SS1G_12014 [Sclerotinia sclerotiorum 1980]
 gi|154697751|gb|EDN97489.1| hypothetical protein SS1G_12014 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 835

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 38/71 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY EVI+ P  F TVR K+    Y   ++F +D  LI  NA  YN P    +  A ++
Sbjct: 99  LPDYFEVIKEPTAFSTVRQKILKKQYKNFKEFVRDFALISHNAQVYNRPSAAAYHDAIAL 158

Query: 121 HELAKKNFENL 131
            EL KK  + L
Sbjct: 159 RELFKKEMQQL 169


>gi|383852643|ref|XP_003701836.1| PREDICTED: protein polybromo-1-like [Megachile rotundata]
          Length = 1651

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 2/72 (2%)

Query: 54  FKMDPEE--LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDT 111
           F++ P +   P+Y +VIE P+D  TV  K+   AY+T+   EKD+ L+C NA Q+N P +
Sbjct: 213 FQLKPSKKLYPEYYDVIETPVDLKTVARKIQEAAYSTITDMEKDLMLMCRNACQFNEPGS 272

Query: 112 IYFRQARSIHEL 123
             ++ A+ + ++
Sbjct: 273 QIYKDAKLLKKI 284



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E PDY EVI+ P++   + + L N  Y +L++   D  L+  NA +YN PD+  ++ A  
Sbjct: 666 EYPDYYEVIKQPINMEKIASTLKNNGYESLDELVSDFILMFDNACKYNEPDSQIYKDALI 725

Query: 120 IHELAKKNFENLRQDSD 136
           +  L  +    L +D +
Sbjct: 726 LQRLVLQTKLQLSEDDE 742



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 9/96 (9%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           PDY ++I++P+    +R K+  G Y T+ +   D+ ++  NA +YN   +  ++ A  + 
Sbjct: 386 PDYYKMIKNPISLLQIRTKIKKGEYGTVSEVAGDMNIMFENAKKYNIHTSRLYKCAVKLQ 445

Query: 122 ELAKKNFENL---RQDSD------DNEPETKVVRRG 148
           ++ ++  + L    QDSD      +N  + K+++R 
Sbjct: 446 KIMQEKVQELLEFDQDSDSDSEFENNSQQPKLIKRA 481



 Score = 42.4 bits (98), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 42/84 (50%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y EV+ +P+D   V+ KL    Y  ++    D+ L+ +NA  +    +  ++ A  + 
Sbjct: 71  PGYYEVVTNPIDLLKVQQKLKTDEYRDMDDLAADIQLMVNNAKAFYMRTSPEYKDATELW 130

Query: 122 ELAKKNFENLRQDSDDNEPETKVV 145
           EL       + ++ +D EP+ K++
Sbjct: 131 ELCVNTKNRIMEEYEDPEPKGKLI 154


>gi|340714787|ref|XP_003395905.1| PREDICTED: LOW QUALITY PROTEIN: protein polybromo-1-like [Bombus
           terrestris]
          Length = 1649

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 2/67 (2%)

Query: 54  FKMDPEE--LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDT 111
           F++ P +   P+Y +VIE P+D  TV  K+  GAY+++   EKD+ L+C NA Q+N P +
Sbjct: 213 FQLKPSKKLYPEYYDVIETPVDLKTVARKIQEGAYSSITDMEKDLMLMCRNACQFNEPGS 272

Query: 112 IYFRQAR 118
             ++ A+
Sbjct: 273 QIYKDAK 279



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 40/77 (51%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E PDY EVI+ PM+   + + L N  Y  L++   D  L+  NA +YN PD+  ++ A  
Sbjct: 666 EYPDYYEVIKQPMNMEKIASALKNNGYENLDELVSDFILMFDNACKYNEPDSQIYKDALI 725

Query: 120 IHELAKKNFENLRQDSD 136
           +  L  +    L +D +
Sbjct: 726 LQRLVLQTKLQLSEDEE 742



 Score = 42.0 bits (97), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 42/84 (50%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
           P Y EV+ +P+D   V+ KL    Y  ++    D+ L+ +NA  +    +  ++ A  + 
Sbjct: 71  PGYYEVVTNPIDLLKVQQKLKTDEYRDMDDLAADIQLMVNNAKAFYMRTSPEYKDATELW 130

Query: 122 ELAKKNFENLRQDSDDNEPETKVV 145
           EL       + ++ +D EP+ K++
Sbjct: 131 ELCINTKNRIMEEYEDPEPKGKLI 154



 Score = 40.8 bits (94), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 9/95 (9%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DY ++I++P+    +R K+  G Y T+ +   D+ ++  NA +YN   +  ++ A  + +
Sbjct: 387 DYYKMIKNPISLLQIRTKIKKGEYGTVSEVAGDMNIMFENAKKYNIHTSRLYKCAVKLQK 446

Query: 123 LAKKNFENL---RQDSD-DNEPET-----KVVRRG 148
           + ++    L    QDSD D+E E      K+++R 
Sbjct: 447 IMQEKVHELLEFDQDSDSDSEFENSSHQPKLIKRA 481


>gi|197101946|ref|NP_001127227.1| ATPase family AAA domain-containing protein 2 [Pongo abelii]
 gi|75070913|sp|Q5RDX4.1|ATAD2_PONAB RecName: Full=ATPase family AAA domain-containing protein 2
 gi|55726531|emb|CAH90033.1| hypothetical protein [Pongo abelii]
          Length = 1091

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +DP+E+PDY  VI+ PMD  +V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 844 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 897


>gi|332026521|gb|EGI66642.1| Bromodomain-containing protein 2 [Acromyrmex echinatior]
          Length = 1559

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 37/63 (58%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY ++I+ PMD GTV+ K+ N  Y T  +F  DV LI +N  +YN PD      AR +
Sbjct: 485 LHDYHDIIKKPMDLGTVKTKMDNRQYKTAHEFASDVRLIFTNCYKYNPPDHDVVSMARKL 544

Query: 121 HEL 123
            ++
Sbjct: 545 QDI 547



 Score = 47.0 bits (110), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
           LPDY ++I+ PMD GT++ +L N  Y + ++  +D   + +N   YN P  D +   QA
Sbjct: 140 LPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQA 198


>gi|326492620|dbj|BAJ90166.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 540

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 33/49 (67%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
           +PDY +VI +PMD GTV+ KL N +Y + + F  DV L  SNAM YN P
Sbjct: 111 IPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 159


>gi|223996165|ref|XP_002287756.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976872|gb|EED95199.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 444

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 5/71 (7%)

Query: 62  PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNA-PDTIYFRQARSI 120
           PDYC+VI+ PM+   +++K+   +Y +L++F +D+ LI  NAMQYNA P+  Y   A+  
Sbjct: 363 PDYCDVIKRPMNLTYIQDKVNKKSYESLQEFFEDIDLIAKNAMQYNAHPENPYHVAAK-- 420

Query: 121 HELAKKNFENL 131
             L +K F+ L
Sbjct: 421 --LFRKQFKKL 429


>gi|344280375|ref|XP_003411959.1| PREDICTED: ATPase family AAA domain-containing protein 2B [Loxodonta
            africana]
          Length = 1456

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +D EE+ DY EVI+ PMD  T+  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 985  VDIEEVSDYLEVIKEPMDLSTIITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1038


>gi|395146456|gb|AFN53616.1| BRD2 [Chrysolophus pictus]
          Length = 733

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY E+I+HPMD  T++ K+ N  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 334 LHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 393

Query: 121 HELAKKNFENLRQDSDDNEP 140
            ++ + ++  +  +  D  P
Sbjct: 394 QDVFEFSYAKMPDEPQDASP 413



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 34/63 (53%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           LPDY ++I+ PMD GT++ +L N  Y    +  +D   + +N   YN P       A+++
Sbjct: 63  LPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTL 122

Query: 121 HEL 123
            ++
Sbjct: 123 EKI 125


>gi|395732087|ref|XP_002812288.2| PREDICTED: ATPase family AAA domain-containing protein 2B isoform
           2, partial [Pongo abelii]
          Length = 935

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 464 VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 517


>gi|331216592|ref|XP_003320975.1| bromodomain and PHD finger-containing protein 3 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
          Length = 1775

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 16/148 (10%)

Query: 1   MQSVVDLAVLTVKRERRLFLVRIQQITTKGLSWNWDPQRLYQIKSYCCSSSID-----FK 55
           +Q V +LA +  KRE+    +R  +I  + +     P  +YQ  S   ++ I+     + 
Sbjct: 349 LQQVKNLAAMICKREK--IKLRKAEIQKEVIEKTLFP--VYQRISLALTALIEADKQKYF 404

Query: 56  MDP---EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTI 112
           + P    E+PDY ++I+HPM++ T++ K+    Y  L +F  DV L  +NA  YN   +I
Sbjct: 405 LHPVSATEVPDYYDIIKHPMNWSTIQRKIDRFEYFRLSEFISDVHLTLTNARIYNHASSI 464

Query: 113 YFRQARSIHELAKKNFENLRQDSDDNEP 140
           Y + A  I     K  E L Q+   +EP
Sbjct: 465 YHKTAIRI----GKAIEPLLQELLASEP 488


>gi|331250555|ref|XP_003337885.1| bromodomain and PHD finger-containing protein 3 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
          Length = 1775

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 16/148 (10%)

Query: 1   MQSVVDLAVLTVKRERRLFLVRIQQITTKGLSWNWDPQRLYQIKSYCCSSSID-----FK 55
           +Q V +LA +  KRE+    +R  +I  + +     P  +YQ  S   ++ I+     + 
Sbjct: 349 LQQVKNLAAMICKREK--IKLRKAEIQKEVIEKTLFP--VYQRISLALTALIEADKQKYF 404

Query: 56  MDP---EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTI 112
           + P    E+PDY ++I+HPM++ T++ K+    Y  L +F  DV L  +NA  YN   +I
Sbjct: 405 LHPVSATEVPDYYDIIKHPMNWSTIQRKIDRFEYFRLSEFISDVHLTLTNARIYNHASSI 464

Query: 113 YFRQARSIHELAKKNFENLRQDSDDNEP 140
           Y + A  I     K  E L Q+   +EP
Sbjct: 465 YHKTAIRI----GKAIEPLLQELLASEP 488


>gi|444516301|gb|ELV11103.1| ATPase family AAA domain-containing protein 2B [Tupaia chinensis]
          Length = 561

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 179 VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 232


>gi|193785084|dbj|BAG54237.1| unnamed protein product [Homo sapiens]
          Length = 626

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 155 VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 208


>gi|300175329|emb|CBK20640.2| unnamed protein product [Blastocystis hominis]
          Length = 249

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 2/90 (2%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP-DTIYFRQARS 119
           +PDY ++I++PMDFGT+  +L NG   T  ++ K + L+ +NA+ YN P D + F  A  
Sbjct: 126 IPDYFDIIKNPMDFGTIYQRLINGQITTEAEYVKLMELVFTNAITYNKPQDDVAF-MAHE 184

Query: 120 IHELAKKNFENLRQDSDDNEPETKVVRRGR 149
           +     K +  +++ +   E +  ++ RGR
Sbjct: 185 LQAYFDKEYTQMKRQASMMEDDGFIITRGR 214


>gi|356513665|ref|XP_003525531.1| PREDICTED: transcription factor GTE8-like [Glycine max]
          Length = 739

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 33/49 (67%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
           +PDY  +I+HPMD GTV++KL +  Y +L  F  DV L  SNAM YN P
Sbjct: 201 IPDYFTIIKHPMDLGTVKSKLISCEYTSLMDFAADVRLTFSNAMSYNPP 249


>gi|385301311|gb|EIF45510.1| histone acetyltransferase gcn5 [Dekkera bruxellensis AWRI1499]
          Length = 314

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 41/68 (60%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++ +E+PDY EVI  PMD  T+  KL N AY TL+ F  D  LI +N  QYN   T +++
Sbjct: 225 VNKKEVPDYYEVIAEPMDLSTMEVKLENNAYETLDDFIYDCRLIFNNCRQYNGESTTFYK 284

Query: 116 QARSIHEL 123
            A  + ++
Sbjct: 285 NANKLEKV 292


>gi|340729450|ref|XP_003403016.1| PREDICTED: homeotic protein female sterile-like, partial [Bombus
           terrestris]
          Length = 497

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 41/71 (57%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DY ++I+ PMD GTV+ K+ N  Y T ++F  DV LI +N  +YN PD      AR +
Sbjct: 49  LHDYHDIIKKPMDLGTVKTKMDNREYKTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKL 108

Query: 121 HELAKKNFENL 131
            ++ +  +  +
Sbjct: 109 QDVFEMRYAKI 119


>gi|354546107|emb|CCE42836.1| hypothetical protein CPAR2_204790 [Candida parapsilosis]
          Length = 466

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 40/68 (58%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
           ++ +E+PDY +VI+ PMD  T+ +KL N  Y + +QF  D  LI  N   YN+  T YF+
Sbjct: 383 VNKDEVPDYYDVIKEPMDLSTMESKLENDKYESFDQFLYDARLIFKNCRSYNSESTTYFK 442

Query: 116 QARSIHEL 123
            A  + + 
Sbjct: 443 NANKLEKF 450


>gi|126322650|ref|XP_001381228.1| PREDICTED: ATPase family AAA domain-containing protein 2 [Monodelphis
            domestica]
          Length = 1391

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 1/55 (1%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
            +DP+E+PDY  VI+ PMD   V +K+    Y T++ + +D+ LICSNA++YN PD
Sbjct: 1003 VDPDEVPDYVTVIKQPMDLSLVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1056


>gi|47077080|dbj|BAD18469.1| unnamed protein product [Homo sapiens]
          Length = 544

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 455 VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 508


>gi|66826485|ref|XP_646597.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
 gi|74858341|sp|Q55C84.1|Y0170_DICDI RecName: Full=Bromodomain-containing protein DDB_G0270170
 gi|60474498|gb|EAL72435.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
          Length = 1578

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 40/66 (60%)

Query: 63  DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
           DY +VI+HPMD GT++  L  G Y T+++F +D  L+ SNA  YN         A+S+ +
Sbjct: 773 DYFDVIKHPMDLGTIKASLIGGGYDTIDKFAEDCRLVFSNAKTYNPSTNPVHIMAQSLED 832

Query: 123 LAKKNF 128
           + +K F
Sbjct: 833 VFEKGF 838


>gi|443927266|gb|ELU45774.1| Bromodomain-containing protein [Rhizoctonia solani AG-1 IA]
          Length = 565

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 37/52 (71%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDT 111
           E PDY E++  PMD  TV++++ +G  ++ + F++DVFL+ +NA+ YN P T
Sbjct: 489 EAPDYYEIVRRPMDLKTVKSRIKDGLISSADHFKRDVFLMFANAIMYNRPGT 540


>gi|443690719|gb|ELT92779.1| hypothetical protein CAPTEDRAFT_228047 [Capitella teleta]
          Length = 1104

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 56   MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
            +DP ++ DY +VI+ PMD  TV+ KL  G Y   + F++D  LI  N + YN   T+  R
Sbjct: 1003 VDPLDVADYYDVIKSPMDLSTVKRKLEAGMYDAWDDFDRDFMLIRENCIAYNPEGTVVRR 1062

Query: 116  QARSIHELAKKNFENLRQD---SDDNEPETK 143
                +     + +E + Q    S    P+TK
Sbjct: 1063 DCDDLFAYYAQEYEKVLQRWQLSQTGSPQTK 1093


>gi|355669838|gb|AER94652.1| ATPase family, AAA domain containing 2B [Mustela putorius furo]
          Length = 510

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 87  VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 140


>gi|224116480|ref|XP_002317311.1| global transcription factor group [Populus trichocarpa]
 gi|222860376|gb|EEE97923.1| global transcription factor group [Populus trichocarpa]
          Length = 567

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 43/71 (60%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +PDY  +I  PMD GTV++KL    YA++++F  D+ L  SNAM YN P     + A  +
Sbjct: 117 IPDYFSIISIPMDLGTVKSKLGKNCYASIKEFADDIRLTFSNAMLYNPPTNNVHKMAEEL 176

Query: 121 HELAKKNFENL 131
           + + + +++ L
Sbjct: 177 NGIFETSWKAL 187


>gi|189194763|ref|XP_001933720.1| transcriptional activator spt7 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187979284|gb|EDU45910.1| transcriptional activator spt7 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 1136

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 3/92 (3%)

Query: 40  LYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLI 99
           L ++K+   +     +++  E PDY  VI+HPMD GT+  KL    Y + ++F  D+ LI
Sbjct: 338 LMELKANEHAHPFLQRVNKREAPDYYNVIKHPMDIGTMMKKLKQLQYKSKKEFVDDLMLI 397

Query: 100 CSNAMQYNAPDTIYFRQARSIHELAKKNFENL 131
            +N ++YNA D  +F + +++H   KK  E L
Sbjct: 398 WANCLKYNA-DPSHFLRKKALH--MKKETEKL 426


>gi|119500410|ref|XP_001266962.1| transcription regulator BDF1, putative [Neosartorya fischeri NRRL
           181]
 gi|119415127|gb|EAW25065.1| transcription regulator BDF1, putative [Neosartorya fischeri NRRL
           181]
          Length = 833

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 10/138 (7%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +P Y ++I+HPMD GT+  KL N  Y T +    D  L+  NA+ +N PD +  ++   +
Sbjct: 316 IPHYPQIIKHPMDLGTIERKLKNTEYKTAQAVVDDFNLMVQNAVTFNGPDHVVSQEGLKL 375

Query: 121 HELAKKNFENLRQ--DSDDNEPE---TKVVRRGRPPTKNFKKPLGRPSLERARSDFSSDV 175
               +K   NL +  + ++ +P+   TK     R P  +      RP+    ++      
Sbjct: 376 KGTFEKQMMNLPKADEVEEKKPKKVSTKTSAAHREPRTSIGTSTARPTATSPQA-----T 430

Query: 176 TLASGAENTALTNRDLGN 193
           T A G E   L  RD  N
Sbjct: 431 TFALGPEGLPLIRRDSTN 448



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 6/93 (6%)

Query: 40  LYQIKSYCCSSSIDFKMDPEEL--PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVF 97
           L++ K Y  ++   F +DP  L  P Y  +I+ PMD  TV++KL  G Y   ++FE D+ 
Sbjct: 489 LHKPKHYNWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLKTGQYENAKEFEVDMR 548

Query: 98  LICSNAMQYNAPDTIYFRQARSIHELAKKNFEN 130
            I  N  ++N P    +   +   E+    FEN
Sbjct: 549 QIFKNCFKFNIPGDPTYMAGQRFQEI----FEN 577


>gi|261278848|pdb|3JVL|A Chain A, Crystal Structure Of Bromodomain 2 Of Mouse Brd4
 gi|261278849|pdb|3JVM|A Chain A, Crystal Structure Of Bromodomain 2 Of Mouse Brd4
          Length = 120

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 5/81 (6%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           L DYC++I+HPMD  T+++KL +  Y   ++F  DV L+ SN  +YN PD      AR +
Sbjct: 44  LHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 103

Query: 121 HELAKKNFENLRQDSDDNEPE 141
            ++ +  F  +      +EPE
Sbjct: 104 QDVFEMRFAKM-----PDEPE 119


>gi|409079718|gb|EKM80079.1| hypothetical protein AGABI1DRAFT_113303, partial [Agaricus bisporus
           var. burnettii JB137-S8]
          Length = 632

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 8/91 (8%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E PDY ++++ PMD  T++ ++ +G  A   ++++D+FL+ +NAM YN P +  +  A  
Sbjct: 550 EAPDYHDIVKRPMDLKTIKGRVKDGLIANSLEYQRDIFLMFANAMMYNRPGSDVYHMAED 609

Query: 120 IHELAKKNFENLRQDSDDNEPETKVVRRGRP 150
           +   ++      RQ        T+ + RGRP
Sbjct: 610 MMHESEGYINAFRQ--------TEGLVRGRP 632


>gi|119621191|gb|EAX00786.1| hCG22387, isoform CRA_b [Homo sapiens]
          Length = 716

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 245 VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 298


>gi|380805891|gb|AFE74821.1| ATPase family AAA domain-containing protein 2B isoform 1, partial
           [Macaca mulatta]
          Length = 517

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 56  MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
           +D EE+ DY EVI+ PMD  TV  K+    Y T + F KD+ LICSNA++YN PD
Sbjct: 278 VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 331


>gi|426198519|gb|EKV48445.1| hypothetical protein AGABI2DRAFT_192053, partial [Agaricus bisporus
           var. bisporus H97]
          Length = 632

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 8/91 (8%)

Query: 60  ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
           E PDY ++++ PMD  T++ ++ +G  A   ++++D+FL+ +NAM YN P +  +  A  
Sbjct: 550 EAPDYHDIVKRPMDLKTIKGRVKDGLIANSLEYQRDIFLMFANAMMYNRPGSDVYHMAED 609

Query: 120 IHELAKKNFENLRQDSDDNEPETKVVRRGRP 150
           +   ++      RQ        T+ + RGRP
Sbjct: 610 MMHESEGYINAFRQ--------TEGLVRGRP 632


>gi|403160477|ref|XP_003890492.1| hypothetical protein PGTG_20786 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|375170263|gb|EHS64083.1| hypothetical protein PGTG_20786 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 1979

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 16/148 (10%)

Query: 1   MQSVVDLAVLTVKRERRLFLVRIQQITTKGLSWNWDPQRLYQIKSYCCSSSID-----FK 55
           +Q V +LA +  KRE+    +R  +I  + +     P  +YQ  S   ++ I+     + 
Sbjct: 553 LQQVKNLAAMICKREK--IKLRKAEIQKEVIEKTLFP--VYQRISLALTALIEADKQKYF 608

Query: 56  MDP---EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTI 112
           + P    E+PDY ++I+HPM++ T++ K+    Y  L +F  DV L  +NA  YN   +I
Sbjct: 609 LHPVSATEVPDYYDIIKHPMNWSTIQRKIDRFEYFRLSEFISDVHLTLTNARIYNHASSI 668

Query: 113 YFRQARSIHELAKKNFENLRQDSDDNEP 140
           Y + A  I     K  E L Q+   +EP
Sbjct: 669 YHKTAIRI----GKAIEPLLQELLASEP 692


>gi|195123201|ref|XP_002006096.1| GI20845 [Drosophila mojavensis]
 gi|193911164|gb|EDW10031.1| GI20845 [Drosophila mojavensis]
          Length = 468

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 43/71 (60%)

Query: 61  LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
           +P Y  VIEHPMD GT+  ++ N  Y  + +   D+ L+ SN  ++N P ++ +R  + +
Sbjct: 67  VPSYYTVIEHPMDMGTIIKRVENNYYHNVNELVYDIRLVISNCFKFNMPGSLVYRNGQEL 126

Query: 121 HELAKKNFENL 131
            EL K+ +++L
Sbjct: 127 EELFKQVYDSL 137


>gi|330932526|ref|XP_003303812.1| hypothetical protein PTT_16173 [Pyrenophora teres f. teres 0-1]
 gi|311319955|gb|EFQ88101.1| hypothetical protein PTT_16173 [Pyrenophora teres f. teres 0-1]
          Length = 1137

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 3/92 (3%)

Query: 40  LYQIKSYCCSSSIDFKMDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLI 99
           L ++K+   +     +++  E PDY  VI+HPMD GT+  KL    Y + ++F  D+ LI
Sbjct: 339 LMELKANEHAHPFLQRVNKREAPDYYNVIKHPMDIGTMMKKLKQLQYKSKKEFVDDLMLI 398

Query: 100 CSNAMQYNAPDTIYFRQARSIHELAKKNFENL 131
            +N ++YNA D  +F + +++H   KK  E L
Sbjct: 399 WANCLKYNA-DPSHFLRKKALH--MKKETEKL 427


>gi|302694747|ref|XP_003037052.1| hypothetical protein SCHCODRAFT_64031 [Schizophyllum commune H4-8]
 gi|300110749|gb|EFJ02150.1| hypothetical protein SCHCODRAFT_64031 [Schizophyllum commune H4-8]
          Length = 1812

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 38/67 (56%)

Query: 62   PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
            P Y   IEHPMDF T+  KL  G Y T+E F KDV LI  N  ++N P T   + A ++ 
Sbjct: 1605 PTYYTEIEHPMDFSTMGKKLTEGKYQTMEDFRKDVELIFKNCRKFNPPSTFPTQCADNVE 1664

Query: 122  ELAKKNF 128
             L KK +
Sbjct: 1665 ALFKKEW 1671



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 38/70 (54%)

Query: 62   PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
            P Y ++I++PMD  T+  KL  G YA    F KD  L+ SNA  +N P ++   +A +  
Sbjct: 1252 PKYIDIIKNPMDLATMEIKLEQGHYADRNAFRKDFELMISNAKTFNPPGSLVHMEAINFE 1311

Query: 122  ELAKKNFENL 131
               +K++  +
Sbjct: 1312 TFFEKHWAAM 1321


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.314    0.130    0.381 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,943,679,674
Number of Sequences: 23463169
Number of extensions: 441846357
Number of successful extensions: 977715
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5152
Number of HSP's successfully gapped in prelim test: 664
Number of HSP's that attempted gapping in prelim test: 966972
Number of HSP's gapped (non-prelim): 10719
length of query: 602
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 453
effective length of database: 8,863,183,186
effective search space: 4015021983258
effective search space used: 4015021983258
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)