BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007472
(602 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ULD4|BRPF3_HUMAN Bromodomain and PHD finger-containing protein 3 OS=Homo sapiens
GN=BRPF3 PE=1 SV=2
Length = 1205
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 60 ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
E+PDY E I PMDF T+R KL + Y TLE+FE+D LI +N M+YNA DTI+ R A
Sbjct: 622 EVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVR 681
Query: 120 IHELAKKNFENLRQDSDD 137
+ +L + R+ +++
Sbjct: 682 LRDLGGAILRHARRQAEN 699
>sp|Q3UQU0|BRD9_MOUSE Bromodomain-containing protein 9 OS=Mus musculus GN=Brd9 PE=2 SV=1
Length = 596
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 62 PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
P Y +I+HPMDFGT+++K+ Y ++ +F+ D L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229
>sp|Q9H8M2|BRD9_HUMAN Bromodomain-containing protein 9 OS=Homo sapiens GN=BRD9 PE=1 SV=2
Length = 597
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 62 PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
P Y +I+HPMDFGT+++K+ Y ++ +F+ D L+C NAM YN PDT+Y++ A+ I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229
>sp|Q7ZUF2|BRD9_DANRE Bromodomain-containing protein 9 OS=Danio rerio GN=brd9 PE=2 SV=1
Length = 631
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 12/112 (10%)
Query: 62 PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
P Y +I+HPMDF T+++K+A Y T+ +F+ D L+C NAM YN P+T+Y++ A+
Sbjct: 201 PGYSMIIKHPMDFSTMKDKIAANEYKTITEFKADFKLMCDNAMVYNRPETVYYKAAK--- 257
Query: 122 ELAKKNFENLRQDS-----DDNEPETKVVR----RGRPPTKNFKKPLGRPSL 164
+L F+ + + + DD PE V P K+ K+P+ P +
Sbjct: 258 KLLHTGFKMMSKQAAILGDDDIAPEEPVTEMMPIHTEYPKKSKKQPVKEPII 309
>sp|O95696|BRD1_HUMAN Bromodomain-containing protein 1 OS=Homo sapiens GN=BRD1 PE=1 SV=1
Length = 1058
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 59 EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
+E+PDY + I+HPMDF T+R +L Y L +FE+D LI N M+YNA DT+++R A
Sbjct: 594 KEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAV 653
Query: 119 SIHELAKKNFENLRQDSD 136
+ + R++ D
Sbjct: 654 RLRDQGGVVLRQARREVD 671
>sp|Q5R8B0|BRD7_PONAB Bromodomain-containing protein 7 OS=Pongo abelii GN=BRD7 PE=2 SV=1
Length = 651
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
Query: 62 PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
P Y +I+HPMDF T++ K+ N Y ++E+ + + L+C+NAM YN P+TIY++ A+ +
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225
Query: 122 E-----LAKKNFENLRQDSD 136
L+++ ++L+Q D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245
>sp|O88665|BRD7_MOUSE Bromodomain-containing protein 7 OS=Mus musculus GN=Brd7 PE=1 SV=1
Length = 651
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
Query: 62 PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
P Y +I+HPMDF T++ K+ N Y ++E+ + + L+C+NAM YN P+TIY++ A+ +
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225
Query: 122 E-----LAKKNFENLRQDSD 136
L+++ ++L+Q D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245
>sp|Q9NPI1|BRD7_HUMAN Bromodomain-containing protein 7 OS=Homo sapiens GN=BRD7 PE=1 SV=1
Length = 651
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
Query: 62 PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
P Y +I+HPMDF T++ K+ N Y ++E+ + + L+C+NAM YN P+TIY++ A+ +
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225
Query: 122 E-----LAKKNFENLRQDSD 136
L+++ ++L+Q D
Sbjct: 226 HSGMKILSQERIQSLKQSID 245
>sp|Q5ZKG2|BRD7_CHICK Bromodomain-containing protein 7 OS=Gallus gallus GN=BRD7 PE=2 SV=1
Length = 651
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
Query: 62 PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
P Y +I++PMDF T++ K+ N Y ++E+ + + L+C+NAM YN PDTIY++ A+ +
Sbjct: 166 PGYSMIIKNPMDFSTMKEKIKNNGYQSIEELKDNFKLMCTNAMTYNKPDTIYYKAAKKLL 225
Query: 122 E-----LAKKNFENLRQ 133
L+++ ++L+Q
Sbjct: 226 HSGMKILSQERIQSLKQ 242
>sp|Q54BA2|Y3800_DICDI Ankyrin repeat, bromo and BTB domain-containing protein
DDB_G0293800 OS=Dictyostelium discoideum GN=DDB_G0293800
PE=4 SV=1
Length = 806
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 56 MDP--EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIY 113
+DP E +PDY +VI+HPMD GT++ KL N Y+T++ F DV L+ NA+ YNA +
Sbjct: 545 VDPLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFAADVRLMFENALTYNADSSPV 604
Query: 114 FRQARSI 120
++ A+++
Sbjct: 605 WKHAKTL 611
>sp|Q9ESU6|BRD4_MOUSE Bromodomain-containing protein 4 OS=Mus musculus GN=Brd4 PE=1 SV=1
Length = 1400
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 63 DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
DYC++I+HPMD T+++KL + Y ++F DV L+ SN +YN PD AR + +
Sbjct: 390 DYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 449
Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
+ + F + +EPE VV PPTK P
Sbjct: 450 VFEMRFAKM-----PDEPEEPVVTVSSPAVPPPTKVVAPP 484
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
LPDY ++I+ PMD GT++ +L N Y ++ +D + +N YN P A ++
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 121 HEL 123
+L
Sbjct: 154 EKL 156
>sp|O60885|BRD4_HUMAN Bromodomain-containing protein 4 OS=Homo sapiens GN=BRD4 PE=1 SV=2
Length = 1362
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 63 DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
DYC++I+HPMD T+++KL Y ++F DV L+ SN +YN PD AR + +
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448
Query: 123 LAKKNFENLRQDSDDNEPETKVVRRGR----PPTKNFKKP 158
+ + F + +EPE VV PPTK P
Sbjct: 449 VFEMRFAKM-----PDEPEEPVVAVSSPAVPPPTKVVAPP 483
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
LPDY ++I+ PMD GT++ +L N Y ++ +D + +N YN P A ++
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 121 HEL 123
+L
Sbjct: 154 EKL 156
>sp|Q93YS6|GTE9_ARATH Transcription factor GTE9 OS=Arabidopsis thaliana GN=GTE9 PE=1 SV=1
Length = 688
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 63 DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
DY VIEHPMD GTV+NKL +G Y+ +F DV L SNAM YN P + A ++ +
Sbjct: 170 DYFNVIEHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRK 229
Query: 123 LAKKNFENLRQ 133
+ ++ L +
Sbjct: 230 FFEVRWKTLEK 240
>sp|Q6NVM8|BRD9_XENTR Bromodomain-containing protein 9 OS=Xenopus tropicalis GN=brd9 PE=2
SV=1
Length = 596
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 41/59 (69%)
Query: 62 PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
P Y +I++PMDF T++ K++ Y ++ +F+ D L+C NAM YN P+T+Y++ A+ +
Sbjct: 183 PGYFMIIKNPMDFSTMKEKISQNEYKSVTEFKADFKLMCDNAMTYNRPETVYYKLAKKL 241
>sp|P55201|BRPF1_HUMAN Peregrin OS=Homo sapiens GN=BRPF1 PE=1 SV=2
Length = 1214
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 60 ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
E+PDY + I+ PMDF T++ L Y + FE+D LI SN ++YNA DTI++R A
Sbjct: 661 EVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVR 720
Query: 120 IHE 122
+ E
Sbjct: 721 LRE 723
>sp|Q93ZB7|GTE11_ARATH Transcription factor GTE11 OS=Arabidopsis thaliana GN=GTE11 PE=1
SV=1
Length = 620
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
+PDY +I+HPMD GTV++KL +G Y++ +F DV L NAM YN D +R A ++
Sbjct: 160 IPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADVRLTFRNAMTYNPSDNNVYRFADTL 219
Query: 121 HELAKKNFENLRQDS 135
+ + ++ + + S
Sbjct: 220 SKFFEVRWKTIEKKS 234
>sp|Q6GLP7|BRD9_XENLA Bromodomain-containing protein 9 OS=Xenopus laevis GN=brd9 PE=2
SV=1
Length = 527
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 41/59 (69%)
Query: 62 PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
P Y +I++PMDF T++ K++ Y ++ +F+ D L+C NAM YN P+T+Y++ A+ +
Sbjct: 113 PGYFMIIKNPMDFSTMKEKISQDEYKSVTEFKADFKLMCDNAMTYNRPETVYYKLAKKL 171
>sp|Q9Y7N0|BDF1_SCHPO SWR1 complex bromodomain subunit bdf1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bdf1 PE=1 SV=1
Length = 578
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 60 ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
+ PDY +VI+ PMD T+++KL Y+TLE+FE D+ L+ +N YN P T R
Sbjct: 289 DCPDYFDVIKEPMDLSTIQSKLNKNEYSTLEEFESDILLMFNNCFTYNPPGTPVHVMGRQ 348
Query: 120 IHELAKKNFE 129
+ + K+ +E
Sbjct: 349 LENVFKEKWE 358
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 37 PQRLY------QIKSYCCSSSIDFKMDP--EELPDYCEVIEHPMDFGTVRNKLANGAYAT 88
PQ+ Y Q+K S+ +DP + +PDY ++++PMD GT+ KL + Y+
Sbjct: 88 PQQKYCLAIVRQLKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSV 147
Query: 89 LEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHELAKKNFENLRQDSDDNEPETKVVRRG 148
++F D+ L+ SN YN ++ +++ E+ ++ L+Q D +P V++
Sbjct: 148 PQEFIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFER---QLKQLPDAEQPAAAPVKKS 204
Query: 149 R 149
+
Sbjct: 205 K 205
>sp|Q9UUK2|GCN5_SCHPO Histone acetyltransferase gcn5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gcn5 PE=1 SV=1
Length = 454
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 59 EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
E++PDY EVIEHPMD T+ +L N Y ++E+F +D I N YN +T Y++ A
Sbjct: 375 EDVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEFIRDAKYIFDNCRSYNDSNTTYYKNAD 434
Query: 119 SIHELAKK 126
+ + +K
Sbjct: 435 RLEKFFQK 442
>sp|Q8CDM1|ATAD2_MOUSE ATPase family AAA domain-containing protein 2 OS=Mus musculus
GN=Atad2 PE=1 SV=1
Length = 1040
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 56 MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
+DP+E+PDY VI+ PMD +V +K+ Y T++ + KD+ LICSNA++YN PD
Sbjct: 662 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLKDIDLICSNALEYN-PD 715
>sp|Q6FTW5|GCN5_CANGA Histone acetyltransferase GCN5 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GCN5 PE=3 SV=1
Length = 546
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 56 MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
++ EE+PDY E I+ PMD T+ KL N Y +E+F D L+C+N YN +T Y++
Sbjct: 463 VNKEEVPDYYEFIKEPMDLSTMELKLENNKYEKMEEFIYDARLVCNNCRLYNGENTSYYK 522
Query: 116 QARSIHEL 123
A + +
Sbjct: 523 YANRLEKF 530
>sp|Q9ULI0|ATD2B_HUMAN ATPase family AAA domain-containing protein 2B OS=Homo sapiens
GN=ATAD2B PE=1 SV=3
Length = 1458
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 56 MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
+D EE+ DY EVI+ PMD TV K+ Y T + F KD+ LICSNA++YN PD
Sbjct: 987 VDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYN-PD 1040
>sp|Q6PL18|ATAD2_HUMAN ATPase family AAA domain-containing protein 2 OS=Homo sapiens
GN=ATAD2 PE=1 SV=1
Length = 1390
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 56 MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
+DP+E+PDY VI+ PMD +V +K+ Y T++ + +D+ LICSNA++YN PD
Sbjct: 1013 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 1066
>sp|Q9LK27|GTE8_ARATH Transcription factor GTE8 OS=Arabidopsis thaliana GN=GTE8 PE=2 SV=2
Length = 813
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
+PDY I+HPMD GTV+ LA+G Y++ +F DV L +NAM YN P
Sbjct: 207 IPDYLTTIKHPMDLGTVKKNLASGVYSSPHEFAADVRLTFTNAMTYNPP 255
>sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10 OS=Arabidopsis thaliana GN=GTE10 PE=1
SV=2
Length = 1061
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
+PDY VI+HPMD GT+R++L G Y++ F DV L SN++ YN P + A+ I
Sbjct: 192 IPDYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGI 251
>sp|Q5RDX4|ATAD2_PONAB ATPase family AAA domain-containing protein 2 OS=Pongo abelii
GN=ATAD2 PE=2 SV=1
Length = 1091
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 56 MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPD 110
+DP+E+PDY VI+ PMD +V +K+ Y T++ + +D+ LICSNA++YN PD
Sbjct: 844 VDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN-PD 897
>sp|Q55C84|Y0170_DICDI Bromodomain-containing protein DDB_G0270170 OS=Dictyostelium
discoideum GN=DDB_G0270170 PE=4 SV=1
Length = 1578
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 63 DYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIHE 122
DY +VI+HPMD GT++ L G Y T+++F +D L+ SNA YN A+S+ +
Sbjct: 773 DYFDVIKHPMDLGTIKASLIGGGYDTIDKFAEDCRLVFSNAKTYNPSTNPVHIMAQSLED 832
Query: 123 LAKKNF 128
+ +K F
Sbjct: 833 VFEKGF 838
>sp|Q6BGW1|GCN5_DEBHA Histone acetyltransferase GCN5 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GCN5 PE=3 SV=2
Length = 455
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%)
Query: 56 MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFR 115
++ EE+ DY +VI+ PMD T+ +KL N Y + +QF D LI +N YNA T YF+
Sbjct: 371 VNKEEVGDYYDVIKEPMDLSTMESKLENDKYDSFDQFLYDARLIFNNCRSYNADSTTYFK 430
Query: 116 QARSIHEL 123
A + +
Sbjct: 431 NATKLEKF 438
>sp|Q9LS28|GTE12_ARATH Transcription factor GTE12 OS=Arabidopsis thaliana GN=GTE12 PE=2
SV=2
Length = 494
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 60 ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
E+PDY VI+ PMD GTV++KL Y+ ++F DV L +NAM YN A+
Sbjct: 99 EIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMHYNPLWNEVHTIAKE 158
Query: 120 IHELAKKNFENL 131
I+E+ + +E+L
Sbjct: 159 INEIFEVRWESL 170
>sp|Q9HGP4|YK82_SCHPO Bromodomain-containing protein C631.02 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC631.02 PE=1 SV=3
Length = 727
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%)
Query: 62 PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
PDY +VI+HPMD GT++NKL + YA+++ FE D+ L+ N ++N+ T + +
Sbjct: 428 PDYFKVIKHPMDLGTMQNKLNHNEYASMKAFEADMVLMFKNCYKFNSAGTPVHLMGKKLE 487
Query: 122 ELAKKNFEN 130
+ +K + N
Sbjct: 488 SIFQKLWAN 496
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 51 SIDFK--MDP--EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQY 106
SI F+ +DP + +PDY +I++P+D GT++ K ++G Y++ + F D+ L+ SN Y
Sbjct: 251 SIPFRAPVDPVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDMNLMFSNCFLY 310
Query: 107 NAPDT 111
N ++
Sbjct: 311 NGTES 315
>sp|P13709|FSH_DROME Homeotic protein female sterile OS=Drosophila melanogaster
GN=fs(1)h PE=1 SV=2
Length = 2038
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
L DY ++I+ PMD GTV+ K+ N Y + +F DV LI +N +YN PD R +
Sbjct: 514 LHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKL 573
Query: 121 HELAKKNFENL 131
++ + + N+
Sbjct: 574 QDVFEMRYANI 584
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
LPDY ++I+ PMD GT++ +L N Y + ++ +D + +N YN P A+++
Sbjct: 70 LPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTL 129
Query: 121 HELAKKNFENLRQDSDDNEPET 142
++ + E++ ++ + EP T
Sbjct: 130 EKVFLQKIESMPKEELELEPVT 151
>sp|F7DRV9|BRDT_XENTR Bromodomain testis-specific protein OS=Xenopus tropicalis GN=brdt
PE=3 SV=1
Length = 933
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 58 PEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQA 117
P L D + I+HPMD T+R+K+ NG Y + F DV L+ N+ +YN PD A
Sbjct: 312 PTSLLDCSDAIKHPMDLATIRDKMENGLYKDTQDFASDVRLMFMNSYKYNPPDNEVVNMA 371
Query: 118 RSIHELAKKNFENLRQD 134
R + ++ + F + D
Sbjct: 372 RKMQDVFEGMFAKIPDD 388
Score = 39.7 bits (91), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP 109
LPDY ++I++PMD T+R +L Y+ +D + +N YN P
Sbjct: 64 LPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDFNTMFTNCYIYNKP 112
>sp|Q5TJG6|BRD2_CANFA Bromodomain-containing protein 2 OS=Canis familiaris GN=BRD2 PE=3
SV=1
Length = 803
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
L DY ++I+HPMD TV+ K+ N Y ++F DV L+ SN +YN PD AR +
Sbjct: 383 LHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 442
Query: 121 HEL 123
++
Sbjct: 443 QDV 445
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
LPDY ++I+ PMD GT++ +L N Y + +D + +N YN P A+++
Sbjct: 110 LPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTL 169
Query: 121 HELAKKNFENLRQDSDD 137
++ + ++ Q+ +
Sbjct: 170 EKIFLQKVASMPQEEQE 186
>sp|Q7JJ13|BRD2_MOUSE Bromodomain-containing protein 2 OS=Mus musculus GN=Brd2 PE=1 SV=1
Length = 798
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
L DY ++I+HPMD TV+ K+ N Y ++F DV L+ SN +YN PD AR +
Sbjct: 382 LHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 441
Query: 121 HEL 123
++
Sbjct: 442 QDV 444
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
LPDY ++I+ PMD GT++ +L N Y + +D + +N YN P A+++
Sbjct: 109 LPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTL 168
Query: 121 HELAKKNFENLRQDSDD 137
++ + ++ Q+ +
Sbjct: 169 EKIFLQKVASMPQEEQE 185
>sp|Q32S26|BRD2_BOVIN Bromodomain-containing protein 2 OS=Bos taurus GN=BRD2 PE=3 SV=1
Length = 803
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
L DY ++I+HPMD TV+ K+ N Y ++F DV L+ SN +YN PD AR +
Sbjct: 383 LHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 442
Query: 121 HEL 123
++
Sbjct: 443 QDV 445
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
LPDY ++I+ PMD GT++ +L N Y + +D + +N YN P A+++
Sbjct: 110 LPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTL 169
Query: 121 HELAKKNFENLRQDSDD 137
++ + ++ Q+ +
Sbjct: 170 EKIFLQKVASMPQEEQE 186
>sp|P25440|BRD2_HUMAN Bromodomain-containing protein 2 OS=Homo sapiens GN=BRD2 PE=1 SV=2
Length = 801
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
L DY ++I+HPMD TV+ K+ N Y ++F DV L+ SN +YN PD AR +
Sbjct: 383 LHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 442
Query: 121 HELAKKNFENLRQDSDDNEPETKVVRRGRPP 151
++ + F + + EP V PP
Sbjct: 443 QDVFE--FRYAKMPDEPLEPGPLPVSTAMPP 471
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
LPDY ++I+ PMD GT++ +L N Y + +D + +N YN P A+++
Sbjct: 110 LPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTL 169
Query: 121 HELAKKNFENLRQDSDD 137
++ + ++ Q+ +
Sbjct: 170 EKIFLQKVASMPQEEQE 186
>sp|Q6MGA9|BRD2_RAT Bromodomain-containing protein 2 OS=Rattus norvegicus GN=Brd2 PE=2
SV=1
Length = 798
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
L DY ++I+HPMD TV+ K+ N Y ++F DV L+ SN +YN PD AR +
Sbjct: 382 LHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 441
Query: 121 HEL 123
++
Sbjct: 442 QDV 444
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
LPDY ++I+ PMD GT++ +L N Y + +D + +N YN P A+++
Sbjct: 109 LPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTL 168
Query: 121 HELAKKNFENLRQDSDD 137
++ + ++ Q+ +
Sbjct: 169 EKIFLQKVASMPQEEQE 185
>sp|Q15059|BRD3_HUMAN Bromodomain-containing protein 3 OS=Homo sapiens GN=BRD3 PE=1 SV=1
Length = 726
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 60 ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
EL DY ++I+HPMD TV+ K+ Y + F DV L+ SN +YN PD AR
Sbjct: 344 ELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARK 403
Query: 120 IHELAKKNFENL 131
+ ++ + F +
Sbjct: 404 LQDVFEMRFAKM 415
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
LPDY ++I++PMD GT++ +L N Y + + +D + +N YN P D + QA
Sbjct: 70 LPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQA 128
>sp|Q07442|BDF2_YEAST Bromodomain-containing factor 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BDF2 PE=1 SV=1
Length = 638
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
LP+Y +V+++PMD GT+ N L N Y T++QF D+ L+ N Q+N + +
Sbjct: 356 LPNYFDVVKNPMDLGTISNNLMNWKYKTIDQFVDDLNLVFYNCFQFNP-------EGNEV 408
Query: 121 HELAKK-----NFENLRQDSDDNEPET 142
H + KK NF L NE ET
Sbjct: 409 HSMGKKLKELFNFHWLENQDILNEIET 435
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
+P Y ++ PMD + KL Y ++EQ D + N + +N P++ A+ I
Sbjct: 169 IPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGPESSISSMAKRI 228
Query: 121 HELAKK 126
+ +K
Sbjct: 229 QKYFEK 234
>sp|Q921C3|BRWD1_MOUSE Bromodomain and WD repeat-containing protein 1 OS=Mus musculus
GN=Brwd1 PE=1 SV=2
Length = 2304
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 43 IKSYCCSSSIDFK--MDPEELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLIC 100
I + C S F+ +D +E PDY ++I+ PMDFGTVR L G Y + +F KD+ LI
Sbjct: 1329 ILIFQCEDSEPFRQPVDLDEYPDYRDIIDTPMDFGTVRETLEAGNYDSPVEFCKDIRLIF 1388
Query: 101 SNAMQY--NAPDTIY 113
SNA Y N IY
Sbjct: 1389 SNAKAYTPNKRSKIY 1403
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 62 PDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIH 121
P YC V+ +P D T+R +L N Y L +V I NA +N P+++ R A+ I
Sbjct: 1196 PKYCTVVAYPTDLYTIRMRLVNRFYRRLSALIWEVRYIEHNARTFNEPESVIARSAKKIT 1255
Query: 122 ELAKKNFEN 130
+ K +N
Sbjct: 1256 DQLLKFIKN 1264
>sp|Q8K2F0|BRD3_MOUSE Bromodomain-containing protein 3 OS=Mus musculus GN=Brd3 PE=1 SV=2
Length = 726
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 60 ELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARS 119
EL DY ++I+HPMD TV+ K+ + Y + F D+ L+ SN +YN PD AR
Sbjct: 343 ELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARK 402
Query: 120 IHELAKKNFENL 131
+ ++ + F +
Sbjct: 403 LQDVFEMRFAKM 414
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAP--DTIYFRQA 117
LPDY ++I++PMD GT++ +L N Y + + +D + +N YN P D + QA
Sbjct: 69 LPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQA 127
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 59 EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF 114
+ELP+Y E+I P+DF ++ ++ N Y +L EKDV L+C NA +N ++ +
Sbjct: 1458 KELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIY 1513
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 59 EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF 114
+ELP+Y E+I P+DF ++ ++ N Y +L EKDV L+C NA +N ++ +
Sbjct: 1458 KELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIY 1513
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 59 EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF 114
+ELP+Y E+I P+DF ++ ++ N Y +L EKDV L+C NA +N ++ +
Sbjct: 1451 KELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIY 1506
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 59 EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF 114
+ELP+Y E+I P+DF ++ ++ N Y +L EKDV L+C NA +N ++ +
Sbjct: 1492 KELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIY 1547
>sp|Q8WZM0|GCN5_YARLI Histone acetyltransferase GCN5 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GCN5 PE=3 SV=1
Length = 464
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 59 EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
+E+PDY EVI+ PMD T+ +L +Y T+E+F D L+ +N YN T Y++ A
Sbjct: 384 DEVPDYYEVIKEPMDLSTMEQRLEADSYKTMEEFVYDARLVFNNCRAYNNETTTYYKNAN 443
Query: 119 SIHEL 123
+ +
Sbjct: 444 KLEKF 448
>sp|P21675|TAF1_HUMAN Transcription initiation factor TFIID subunit 1 OS=Homo sapiens
GN=TAF1 PE=1 SV=2
Length = 1872
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
+PDY +VI +PMD T+R ++ Y + E F DV LI +N+++YN P++ Y + A+ I
Sbjct: 1537 VPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEI 1596
Score = 40.8 bits (94), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
+ DY ++I PMD T+R + Y + E+F + + LI N+ YN P + ++S+
Sbjct: 1414 VKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSM 1473
Query: 121 HELAKKNFENLRQDSD 136
+L E L++ D
Sbjct: 1474 LDLCD---EKLKEKED 1486
>sp|Q756G9|GCN5_ASHGO Histone acetyltransferase GCN5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GCN5
PE=3 SV=1
Length = 452
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 59 EELPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQAR 118
+E+PDY E I+ PMD T+ KL N Y +E F D LI +N YN +T YF+ A
Sbjct: 372 DEVPDYYEFIKEPMDLSTMEIKLENNRYEKMEDFIYDARLIFNNCRAYNGENTSYFKYAN 431
Query: 119 SIHEL 123
+ +
Sbjct: 432 RLEKF 436
>sp|Q80UV9|TAF1_MOUSE Transcription initiation factor TFIID subunit 1 OS=Mus musculus
GN=Taf1 PE=2 SV=2
Length = 1891
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
+PDY +VI PMD T+R ++ Y + E F DV LI +N+++YN P++ Y + A+ I
Sbjct: 1558 VPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEI 1617
Query: 121 ----HELAKKNFENLRQ 133
H+ + E+L Q
Sbjct: 1618 VNVCHQTLTEYDEHLTQ 1634
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 61 LPDYCEVIEHPMDFGTVRNKLANGAYATLEQFEKDVFLICSNAMQYNAPDTIYFRQARSI 120
+ DY ++I PMD T+R + Y + E+F + + LI N+ YN P + ++S+
Sbjct: 1435 VKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSM 1494
Query: 121 HELAKKNFENLRQDSD 136
+L E L++ D
Sbjct: 1495 LDLCD---EKLKEKED 1507
>sp|Q338B9|GCN5_ORYSJ Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica
GN=GCN5 PE=2 SV=1
Length = 511
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 56 MDPEELPDYCEVIEHPMDFGTVRNKL-ANGAYATLEQFEKDVFLICSNAMQYNAPDTIYF 114
+D ++PDY ++I+ P+D T+ ++ + Y TLE F D+ + SNA YN+PDTIY+
Sbjct: 427 VDSRDVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADMKRMFSNAKTYNSPDTIYY 486
Query: 115 RQA 117
+ A
Sbjct: 487 KCA 489
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 234,704,353
Number of Sequences: 539616
Number of extensions: 10435990
Number of successful extensions: 22893
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 22607
Number of HSP's gapped (non-prelim): 307
length of query: 602
length of database: 191,569,459
effective HSP length: 123
effective length of query: 479
effective length of database: 125,196,691
effective search space: 59969214989
effective search space used: 59969214989
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)