Query 007473
Match_columns 602
No_of_seqs 236 out of 1755
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 00:04:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007473.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007473hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02230 phosphoinositide phos 100.0 9E-166 2E-170 1358.8 51.0 590 1-596 7-598 (598)
2 PLN02222 phosphoinositide phos 100.0 9E-162 2E-166 1325.8 50.8 575 3-596 5-581 (581)
3 PLN02952 phosphoinositide phos 100.0 4E-159 9E-164 1308.4 49.8 578 3-596 18-599 (599)
4 KOG0169 Phosphoinositide-speci 100.0 5E-159 1E-163 1299.3 40.2 557 1-597 184-745 (746)
5 PLN02228 Phosphoinositide phos 100.0 2E-157 4E-162 1288.4 50.0 558 3-599 4-564 (567)
6 PLN02223 phosphoinositide phos 100.0 4E-152 9E-157 1228.7 46.2 524 12-595 2-536 (537)
7 KOG1265 Phospholipase C [Lipid 100.0 6E-142 1E-146 1158.8 34.5 555 21-597 216-824 (1189)
8 KOG1264 Phospholipase C [Lipid 100.0 2E-131 5E-136 1066.3 31.1 538 39-598 235-1191(1267)
9 cd08629 PI-PLCc_delta1 Catalyt 100.0 3E-110 6E-115 832.1 19.8 257 110-435 1-258 (258)
10 cd08633 PI-PLCc_eta2 Catalytic 100.0 2E-109 5E-114 822.6 19.8 252 110-435 1-254 (254)
11 cd08624 PI-PLCc_beta2 Catalyti 100.0 6E-109 1E-113 824.9 20.9 254 110-435 1-261 (261)
12 cd08630 PI-PLCc_delta3 Catalyt 100.0 5E-109 1E-113 825.3 19.7 256 110-435 1-258 (258)
13 cd08632 PI-PLCc_eta1 Catalytic 100.0 6E-109 1E-113 817.6 19.5 251 110-435 1-253 (253)
14 cd08595 PI-PLCc_zeta Catalytic 100.0 7E-109 1E-113 822.9 19.5 255 110-435 1-257 (257)
15 cd08631 PI-PLCc_delta4 Catalyt 100.0 9E-109 2E-113 822.5 19.0 256 110-435 1-258 (258)
16 cd08596 PI-PLCc_epsilon Cataly 100.0 2E-108 4E-113 818.1 18.2 249 110-435 1-254 (254)
17 cd08626 PI-PLCc_beta4 Catalyti 100.0 7E-108 1E-112 815.8 19.4 251 110-435 1-257 (257)
18 cd08623 PI-PLCc_beta1 Catalyti 100.0 1E-107 2E-112 814.7 19.4 251 110-435 1-258 (258)
19 cd08591 PI-PLCc_beta Catalytic 100.0 3E-107 6E-112 811.2 20.2 251 110-435 1-257 (257)
20 cd08625 PI-PLCc_beta3 Catalyti 100.0 3E-107 8E-112 815.5 21.0 250 111-435 2-258 (258)
21 cd08593 PI-PLCc_delta Catalyti 100.0 2E-107 5E-112 815.1 19.8 256 110-435 1-257 (257)
22 cd08594 PI-PLCc_eta Catalytic 100.0 2E-106 5E-111 790.3 19.6 225 110-435 1-227 (227)
23 cd08628 PI-PLCc_gamma2 Catalyt 100.0 1E-106 3E-111 806.1 17.1 253 110-435 1-254 (254)
24 cd08597 PI-PLCc_PRIP_metazoa C 100.0 2E-104 4E-109 795.8 19.1 259 110-435 1-260 (260)
25 cd08558 PI-PLCc_eukaryota Cata 100.0 2E-103 4E-108 772.8 20.4 225 110-435 1-226 (226)
26 cd08627 PI-PLCc_gamma1 Catalyt 100.0 3E-103 6E-108 768.2 19.9 226 110-434 1-228 (229)
27 cd08598 PI-PLC1c_yeast Catalyt 100.0 4E-103 9E-108 772.5 20.0 229 110-434 1-230 (231)
28 cd08592 PI-PLCc_gamma Catalyti 100.0 6E-102 1E-106 762.4 19.6 227 110-435 1-229 (229)
29 cd08599 PI-PLCc_plant Catalyti 100.0 5E-101 1E-105 757.4 19.9 226 110-435 1-228 (228)
30 cd00137 PI-PLCc Catalytic doma 100.0 1.5E-63 3.2E-68 512.3 16.7 251 110-435 1-274 (274)
31 smart00149 PLCYc Phospholipase 100.0 1E-45 2.2E-50 328.5 7.0 115 332-447 1-115 (115)
32 PF00387 PI-PLC-Y: Phosphatidy 100.0 3.3E-46 7.1E-51 334.2 3.3 118 330-448 1-118 (118)
33 smart00148 PLCXc Phospholipase 100.0 2E-40 4.4E-45 306.4 12.6 134 111-245 1-135 (135)
34 PF00388 PI-PLC-X: Phosphatidy 100.0 3.7E-37 8E-42 288.6 12.5 143 113-256 1-146 (146)
35 cd08589 PI-PLCc_SaPLC1_like Ca 99.9 1.4E-21 3.1E-26 202.4 11.9 146 111-256 3-209 (324)
36 cd00275 C2_PLC_like C2 domain 99.8 1.2E-18 2.6E-23 158.5 14.7 124 467-595 2-127 (128)
37 cd08590 PI-PLCc_Rv2075c_like C 99.8 2E-18 4.3E-23 176.9 11.9 143 110-254 3-168 (267)
38 cd08395 C2C_Munc13 C2 domain t 99.7 5.3E-17 1.1E-21 147.2 11.9 103 468-577 1-111 (120)
39 cd04036 C2_cPLA2 C2 domain pre 99.7 1.2E-15 2.6E-20 137.7 13.5 113 469-595 2-117 (119)
40 cd08682 C2_Rab11-FIP_classI C2 99.7 1.1E-15 2.3E-20 139.5 12.6 115 469-594 1-126 (126)
41 cd08677 C2A_Synaptotagmin-13 C 99.6 5.3E-16 1.2E-20 139.6 9.7 99 466-574 13-115 (118)
42 cd08557 PI-PLCc_bacteria_like 99.6 5.4E-16 1.2E-20 159.1 9.8 144 112-256 4-158 (271)
43 cd04042 C2A_MCTP_PRT C2 domain 99.6 3.7E-15 8E-20 134.9 13.2 117 468-596 1-120 (121)
44 cd08381 C2B_PI3K_class_II C2 d 99.6 2.4E-15 5.2E-20 136.8 11.9 97 467-570 13-112 (122)
45 cd04016 C2_Tollip C2 domain pr 99.6 6.1E-15 1.3E-19 134.0 13.5 115 467-595 2-121 (121)
46 cd08406 C2B_Synaptotagmin-12 C 99.6 1.4E-15 3.1E-20 141.0 8.9 112 467-584 15-129 (136)
47 cd04019 C2C_MCTP_PRT_plant C2 99.6 5.8E-15 1.3E-19 139.1 12.9 119 468-597 1-133 (150)
48 cd04022 C2A_MCTP_PRT_plant C2 99.6 5.2E-15 1.1E-19 135.2 12.2 118 468-596 1-126 (127)
49 cd04010 C2B_RasA3 C2 domain se 99.6 7.9E-15 1.7E-19 137.8 13.4 108 468-583 1-127 (148)
50 cd08379 C2D_MCTP_PRT_plant C2 99.6 8.8E-15 1.9E-19 133.8 12.6 114 468-590 1-124 (126)
51 cd04029 C2A_SLP-4_5 C2 domain 99.6 7.8E-15 1.7E-19 134.0 11.3 106 466-576 14-124 (125)
52 cd08692 C2B_Tac2-N C2 domain s 99.6 4.9E-15 1.1E-19 136.4 9.8 114 464-583 11-128 (135)
53 cd08400 C2_Ras_p21A1 C2 domain 99.6 3E-14 6.4E-19 130.3 14.0 118 467-598 4-125 (126)
54 cd04015 C2_plant_PLD C2 domain 99.6 2.6E-14 5.6E-19 135.9 13.9 125 466-596 6-158 (158)
55 cd08377 C2C_MCTP_PRT C2 domain 99.6 3.4E-14 7.5E-19 127.7 13.8 117 467-595 1-118 (119)
56 cd04028 C2B_RIM1alpha C2 domai 99.6 2.7E-14 5.9E-19 133.7 13.1 108 467-580 29-140 (146)
57 cd08393 C2A_SLP-1_2 C2 domain 99.6 1.4E-14 3E-19 132.3 10.5 98 467-570 15-115 (125)
58 cd08392 C2A_SLP-3 C2 domain fi 99.6 2E-14 4.2E-19 132.0 11.5 97 467-569 15-114 (128)
59 cd04033 C2_NEDD4_NEDD4L C2 dom 99.6 3.3E-14 7.1E-19 130.6 13.0 121 468-595 1-132 (133)
60 cd08407 C2B_Synaptotagmin-13 C 99.6 6.2E-15 1.3E-19 136.9 8.0 115 466-584 14-131 (138)
61 cd04039 C2_PSD C2 domain prese 99.6 1.7E-14 3.7E-19 128.5 10.0 97 468-571 2-99 (108)
62 cd04041 C2A_fungal C2 domain f 99.5 1.6E-14 3.5E-19 129.0 9.0 103 467-577 1-107 (111)
63 cd08378 C2B_MCTP_PRT_plant C2 99.5 6.6E-14 1.4E-18 127.1 13.2 110 469-595 2-119 (121)
64 cd08376 C2B_MCTP_PRT C2 domain 99.5 6.7E-14 1.4E-18 125.5 13.0 111 469-596 2-115 (116)
65 cd08681 C2_fungal_Inn1p-like C 99.5 4.6E-14 1E-18 126.9 11.3 114 467-595 1-118 (118)
66 cd08373 C2A_Ferlin C2 domain f 99.5 8.2E-14 1.8E-18 127.2 13.0 113 473-599 2-119 (127)
67 cd04031 C2A_RIM1alpha C2 domai 99.5 7.7E-14 1.7E-18 126.5 12.4 105 466-576 15-124 (125)
68 cd08404 C2B_Synaptotagmin-4 C2 99.5 1.8E-14 3.9E-19 133.2 8.2 113 466-584 14-129 (136)
69 cd08678 C2_C21orf25-like C2 do 99.5 1.3E-13 2.8E-18 125.9 12.7 121 469-601 1-125 (126)
70 cd08680 C2_Kibra C2 domain fou 99.5 6.1E-14 1.3E-18 128.0 10.5 97 466-568 13-112 (124)
71 cd08375 C2_Intersectin C2 doma 99.5 1.3E-13 2.8E-18 127.9 12.7 113 467-595 15-135 (136)
72 cd08402 C2B_Synaptotagmin-1 C2 99.5 2.9E-14 6.3E-19 131.8 8.0 113 466-584 14-129 (136)
73 cd04040 C2D_Tricalbin-like C2 99.5 1.4E-13 3E-18 123.2 12.0 111 469-591 1-114 (115)
74 cd04025 C2B_RasA1_RasA4 C2 dom 99.5 1.5E-13 3.3E-18 124.6 12.3 115 468-593 1-122 (123)
75 KOG1030 Predicted Ca2+-depende 99.5 3.6E-14 7.8E-19 133.1 8.3 92 467-570 6-97 (168)
76 cd04050 C2B_Synaptotagmin-like 99.5 1.1E-13 2.3E-18 122.3 10.8 96 469-578 2-102 (105)
77 cd08385 C2A_Synaptotagmin-1-5- 99.5 1.6E-13 3.4E-18 124.6 11.6 98 466-571 15-114 (124)
78 cd04032 C2_Perforin C2 domain 99.5 2.1E-13 4.6E-18 124.9 11.9 93 466-570 27-120 (127)
79 cd08685 C2_RGS-like C2 domain 99.5 1E-13 2.2E-18 125.6 9.7 98 467-571 12-111 (119)
80 cd08688 C2_KIAA0528-like C2 do 99.5 9.3E-14 2E-18 123.8 9.3 99 469-578 1-109 (110)
81 cd08384 C2B_Rabphilin_Doc2 C2 99.5 7.1E-14 1.5E-18 128.5 8.5 113 466-584 12-127 (133)
82 cd08382 C2_Smurf-like C2 domai 99.5 2.7E-13 5.9E-18 123.3 12.0 113 469-593 2-122 (123)
83 cd04018 C2C_Ferlin C2 domain t 99.5 1.4E-13 3.1E-18 129.7 10.4 107 468-579 1-126 (151)
84 cd04030 C2C_KIAA1228 C2 domain 99.5 2.5E-13 5.4E-18 123.6 11.7 99 466-570 15-117 (127)
85 cd04024 C2A_Synaptotagmin-like 99.5 4E-13 8.6E-18 122.3 12.8 117 468-595 2-128 (128)
86 cd08521 C2A_SLP C2 domain firs 99.5 2.7E-13 5.8E-18 122.6 11.5 99 466-570 13-114 (123)
87 cd08391 C2A_C2C_Synaptotagmin_ 99.5 5E-13 1.1E-17 120.3 13.1 117 468-595 2-121 (121)
88 cd04043 C2_Munc13_fungal C2 do 99.5 6.1E-13 1.3E-17 121.0 13.7 115 468-597 2-122 (126)
89 cd08410 C2B_Synaptotagmin-17 C 99.5 9.2E-14 2E-18 128.5 8.4 112 467-584 14-129 (135)
90 cd08403 C2B_Synaptotagmin-3-5- 99.5 9.1E-14 2E-18 128.1 8.1 113 466-584 13-128 (134)
91 cd08387 C2A_Synaptotagmin-8 C2 99.5 2.9E-13 6.4E-18 122.9 11.3 98 466-571 15-114 (124)
92 cd04011 C2B_Ferlin C2 domain s 99.5 3E-13 6.6E-18 120.6 10.7 98 467-579 4-111 (111)
93 cd08405 C2B_Synaptotagmin-7 C2 99.5 1.2E-13 2.6E-18 127.6 8.1 113 466-584 14-129 (136)
94 cd04009 C2B_Munc13-like C2 dom 99.5 3.9E-13 8.5E-18 123.9 11.1 96 467-568 16-117 (133)
95 cd08388 C2A_Synaptotagmin-4-11 99.5 4.4E-13 9.5E-18 123.0 11.3 95 467-569 16-114 (128)
96 cd04046 C2_Calpain C2 domain p 99.5 1.9E-12 4E-17 118.3 15.4 119 467-598 3-124 (126)
97 cd04017 C2D_Ferlin C2 domain f 99.5 9.7E-13 2.1E-17 121.6 13.7 117 468-598 2-134 (135)
98 cd04027 C2B_Munc13 C2 domain s 99.5 8.6E-13 1.9E-17 120.7 13.1 114 468-593 2-127 (127)
99 cd08690 C2_Freud-1 C2 domain f 99.5 1.4E-12 3.1E-17 123.2 14.8 123 469-597 4-138 (155)
100 cd04054 C2A_Rasal1_RasA4 C2 do 99.4 7E-13 1.5E-17 120.2 11.9 115 469-594 2-120 (121)
101 cd04051 C2_SRC2_like C2 domain 99.4 4.2E-13 9E-18 122.0 10.0 107 468-584 1-120 (125)
102 cd08401 C2A_RasA2_RasA3 C2 dom 99.4 1.3E-12 2.8E-17 118.7 12.9 116 469-594 2-120 (121)
103 cd04013 C2_SynGAP_like C2 doma 99.4 1.2E-12 2.7E-17 122.5 13.0 121 466-602 10-145 (146)
104 cd04014 C2_PKC_epsilon C2 doma 99.4 1.4E-12 3.1E-17 119.8 13.1 118 467-597 4-130 (132)
105 cd04020 C2B_SLP_1-2-3-4 C2 dom 99.4 9.2E-13 2E-17 125.8 11.5 97 466-568 26-125 (162)
106 cd08389 C2A_Synaptotagmin-14_1 99.4 9.5E-13 2.1E-17 120.0 10.8 101 467-576 16-122 (124)
107 cd04048 C2A_Copine C2 domain f 99.4 8.5E-13 1.8E-17 119.3 10.0 103 473-581 6-117 (120)
108 cd08409 C2B_Synaptotagmin-15 C 99.4 7.1E-13 1.5E-17 123.0 9.4 97 467-570 15-113 (137)
109 cd04026 C2_PKC_alpha_gamma C2 99.4 1.3E-12 2.8E-17 119.8 11.1 108 467-580 13-123 (131)
110 cd04044 C2A_Tricalbin-like C2 99.4 2.1E-12 4.5E-17 116.8 12.2 119 467-596 2-123 (124)
111 cd08386 C2A_Synaptotagmin-7 C2 99.4 1.6E-12 3.4E-17 118.1 11.4 97 466-570 15-114 (125)
112 PF09279 EF-hand_like: Phospho 99.4 2.8E-13 6.1E-18 114.7 6.0 75 27-105 1-75 (83)
113 cd00276 C2B_Synaptotagmin C2 d 99.4 4.9E-13 1.1E-17 122.5 7.9 112 467-584 14-128 (134)
114 cd08390 C2A_Synaptotagmin-15-1 99.4 1.6E-12 3.4E-17 117.7 10.4 103 466-576 13-121 (123)
115 cd08408 C2B_Synaptotagmin-14_1 99.4 1.4E-12 3.1E-17 121.2 10.1 113 466-584 14-131 (138)
116 cd04035 C2A_Rabphilin_Doc2 C2 99.4 1.8E-12 3.9E-17 117.6 10.3 99 466-571 14-115 (123)
117 cd04037 C2E_Ferlin C2 domain f 99.4 2.4E-12 5.1E-17 117.4 10.6 91 469-568 2-92 (124)
118 cd08691 C2_NEDL1-like C2 domai 99.4 6E-12 1.3E-16 116.8 12.9 116 469-593 3-136 (137)
119 cd04038 C2_ArfGAP C2 domain pr 99.4 2.7E-12 5.9E-17 120.3 10.1 91 467-570 2-92 (145)
120 cd08686 C2_ABR C2 domain in th 99.3 5.1E-12 1.1E-16 113.7 9.9 92 469-573 1-102 (118)
121 cd08675 C2B_RasGAP C2 domain s 99.3 7.8E-12 1.7E-16 116.1 11.2 104 469-580 1-122 (137)
122 PLN03008 Phospholipase D delta 99.3 1E-11 2.3E-16 141.3 14.1 105 492-602 75-183 (868)
123 cd08394 C2A_Munc13 C2 domain f 99.3 1.1E-11 2.5E-16 112.8 10.1 94 467-577 2-100 (127)
124 cd04049 C2_putative_Elicitor-r 99.3 1.2E-11 2.6E-16 112.3 10.2 91 468-569 2-96 (124)
125 KOG0696 Serine/threonine prote 99.3 3.3E-12 7E-17 133.9 6.0 96 467-568 180-276 (683)
126 cd04045 C2C_Tricalbin-like C2 99.3 1.6E-11 3.4E-16 111.4 9.5 92 468-570 2-93 (120)
127 cd08676 C2A_Munc13-like C2 dom 99.3 2.8E-11 6.1E-16 114.4 11.1 94 465-568 26-143 (153)
128 cd08383 C2A_RasGAP C2 domain ( 99.3 6.4E-11 1.4E-15 106.0 12.6 113 469-595 2-117 (117)
129 PF00168 C2: C2 domain; Inter 99.3 2E-11 4.3E-16 101.7 8.6 85 469-561 1-85 (85)
130 cd04052 C2B_Tricalbin-like C2 99.2 3.7E-11 7.9E-16 107.3 10.3 99 489-597 8-110 (111)
131 cd04021 C2_E3_ubiquitin_ligase 99.2 5.6E-11 1.2E-15 108.5 11.3 113 468-593 3-124 (125)
132 cd08555 PI-PLCc_GDPD_SF Cataly 99.2 4E-11 8.7E-16 116.2 10.7 98 124-226 2-109 (179)
133 cd04047 C2B_Copine C2 domain s 99.2 8.7E-11 1.9E-15 104.3 9.4 92 472-570 5-101 (110)
134 KOG1028 Ca2+-dependent phospho 99.1 2.4E-10 5.2E-15 124.7 12.5 123 467-597 167-295 (421)
135 smart00239 C2 Protein kinase C 99.1 5.7E-10 1.2E-14 94.9 10.0 99 469-575 2-100 (101)
136 KOG1011 Neurotransmitter relea 99.1 3.6E-10 7.9E-15 122.8 8.6 117 467-595 295-423 (1283)
137 cd08374 C2F_Ferlin C2 domain s 99.0 2.1E-09 4.5E-14 99.1 10.6 97 469-571 2-125 (133)
138 PLN03200 cellulose synthase-in 99.0 1.7E-09 3.6E-14 133.9 11.7 115 466-596 1979-2100(2102)
139 PLN02270 phospholipase D alpha 98.9 9.1E-09 2E-13 117.6 13.0 131 466-602 7-154 (808)
140 cd08586 PI-PLCc_BcPLC_like Cat 98.9 5.5E-09 1.2E-13 108.3 9.0 138 113-255 6-148 (279)
141 cd00030 C2 C2 domain. The C2 d 98.9 1.6E-08 3.5E-13 85.2 9.7 90 469-568 1-90 (102)
142 KOG1028 Ca2+-dependent phospho 98.8 9.3E-09 2E-13 112.4 9.6 183 394-584 206-412 (421)
143 cd08588 PI-PLCc_At5g67130_like 98.8 9.5E-09 2.1E-13 106.0 9.1 138 112-253 7-153 (270)
144 COG5038 Ca2+-dependent lipid-b 98.6 1E-07 2.3E-12 110.9 10.1 104 467-580 1040-1146(1227)
145 KOG1328 Synaptic vesicle prote 98.4 8.8E-08 1.9E-12 106.0 2.8 96 467-568 947-1048(1103)
146 PLN02352 phospholipase D epsil 98.4 1.4E-06 3E-11 99.8 12.2 124 466-602 9-136 (758)
147 KOG2059 Ras GTPase-activating 98.3 1.7E-06 3.7E-11 96.3 8.4 109 492-602 149-282 (800)
148 COG5038 Ca2+-dependent lipid-b 98.0 1.5E-05 3.3E-10 93.4 9.0 93 467-568 436-528 (1227)
149 cd08689 C2_fungal_Pkc1p C2 dom 97.9 3E-05 6.5E-10 68.3 6.8 87 469-568 1-87 (109)
150 KOG1031 Predicted Ca2+-depende 97.8 6E-05 1.3E-09 82.2 8.7 121 467-597 3-139 (1169)
151 KOG2059 Ras GTPase-activating 97.8 8.4E-05 1.8E-09 83.2 9.9 119 467-599 5-128 (800)
152 KOG1011 Neurotransmitter relea 97.7 0.00011 2.4E-09 81.1 8.3 103 467-576 1125-1235(1283)
153 KOG0905 Phosphoinositide 3-kin 97.7 3.7E-05 8.1E-10 89.6 4.8 96 467-568 1524-1622(1639)
154 cd08622 PI-PLCXDc_CG14945_like 97.6 0.00049 1.1E-08 71.5 11.2 136 114-254 6-159 (276)
155 KOG1013 Synaptic vesicle prote 97.5 0.00014 3.1E-09 75.2 6.2 104 468-583 234-339 (362)
156 cd08587 PI-PLCXDc_like Catalyt 97.5 0.00075 1.6E-08 70.4 11.5 136 114-253 6-170 (288)
157 cd04012 C2A_PI3K_class_II C2 d 97.1 0.0031 6.7E-08 60.9 10.2 107 466-578 7-134 (171)
158 cd08398 C2_PI3K_class_I_alpha 97.1 0.0057 1.2E-07 58.3 11.6 101 467-577 8-120 (158)
159 cd08616 PI-PLCXD1c Catalytic d 97.1 0.0052 1.1E-07 64.3 12.0 135 114-254 7-174 (290)
160 cd08693 C2_PI3K_class_I_beta_d 97.0 0.0079 1.7E-07 58.2 11.9 103 467-577 8-134 (173)
161 cd08683 C2_C2cd3 C2 domain fou 97.0 0.0018 3.9E-08 59.0 6.3 73 494-567 33-130 (143)
162 cd08380 C2_PI3K_like C2 domain 97.0 0.0083 1.8E-07 56.8 11.2 103 468-577 9-121 (156)
163 KOG1013 Synaptic vesicle prote 96.8 0.00034 7.4E-09 72.5 0.4 98 467-570 93-193 (362)
164 KOG1328 Synaptic vesicle prote 96.7 0.00087 1.9E-08 75.3 2.3 83 512-594 179-299 (1103)
165 KOG1326 Membrane-associated pr 96.6 0.0015 3.2E-08 76.0 3.9 94 464-566 610-703 (1105)
166 cd08397 C2_PI3K_class_III C2 d 96.6 0.008 1.7E-07 57.4 8.0 84 494-577 30-121 (159)
167 cd08556 GDPD Glycerophosphodie 96.6 0.0093 2E-07 57.3 8.7 64 134-211 9-72 (189)
168 cd08582 GDPD_like_2 Glyceropho 96.6 0.0083 1.8E-07 60.4 8.5 40 136-176 11-50 (233)
169 cd08562 GDPD_EcUgpQ_like Glyce 96.5 0.0068 1.5E-07 60.6 7.6 40 136-176 11-50 (229)
170 PLN02964 phosphatidylserine de 96.4 0.0064 1.4E-07 69.7 7.4 100 465-581 52-156 (644)
171 cd08399 C2_PI3K_class_I_gamma 96.3 0.026 5.6E-07 54.8 9.6 102 468-576 11-135 (178)
172 cd08684 C2A_Tac2-N C2 domain f 96.3 0.007 1.5E-07 51.6 4.9 90 471-569 3-94 (103)
173 cd08579 GDPD_memb_like Glycero 96.2 0.011 2.4E-07 58.9 7.2 40 136-176 11-50 (220)
174 PF03009 GDPD: Glycerophosphor 96.2 0.0068 1.5E-07 60.7 5.2 41 136-177 8-48 (256)
175 cd08563 GDPD_TtGDE_like Glycer 96.0 0.018 3.8E-07 57.9 7.5 40 136-176 13-52 (230)
176 cd08567 GDPD_SpGDE_like Glycer 95.9 0.028 6E-07 57.5 8.3 40 137-177 14-53 (263)
177 cd08577 PI-PLCc_GDPD_SF_unchar 95.8 0.034 7.4E-07 56.2 8.2 98 124-232 4-110 (228)
178 cd08619 PI-PLCXDc_plant Cataly 95.7 0.046 1E-06 56.7 9.0 137 111-256 23-166 (285)
179 PF00792 PI3K_C2: Phosphoinosi 95.6 0.035 7.5E-07 51.8 7.0 82 496-577 4-99 (142)
180 cd08620 PI-PLCXDc_like_1 Catal 95.6 0.099 2.1E-06 54.5 11.0 140 114-255 6-162 (281)
181 cd08565 GDPD_pAtGDE_like Glyce 95.5 0.068 1.5E-06 54.2 9.4 39 137-176 12-50 (235)
182 cd08566 GDPD_AtGDE_like Glycer 95.4 0.058 1.3E-06 54.8 8.2 38 138-176 15-52 (240)
183 cd05029 S-100A6 S-100A6: S-100 95.2 0.088 1.9E-06 45.1 7.6 63 27-97 11-78 (88)
184 cd08573 GDPD_GDE1 Glycerophosp 95.1 0.082 1.8E-06 54.3 8.5 40 136-176 11-50 (258)
185 cd08568 GDPD_TmGDE_like Glycer 95.0 0.09 2E-06 52.7 8.4 79 135-223 11-114 (226)
186 cd08564 GDPD_GsGDE_like Glycer 94.6 0.16 3.5E-06 52.3 9.1 39 136-175 18-56 (265)
187 cd08584 PI-PLCc_GDPD_SF_unchar 94.4 0.17 3.7E-06 49.7 8.1 47 140-190 8-54 (192)
188 cd08575 GDPD_GDE4_like Glycero 94.2 0.049 1.1E-06 56.2 4.3 41 137-178 14-54 (264)
189 KOG3837 Uncharacterized conser 94.0 0.054 1.2E-06 58.0 4.1 123 467-597 367-504 (523)
190 cd08561 GDPD_cytoplasmic_ScUgp 94.0 0.056 1.2E-06 55.0 4.2 41 136-177 11-51 (249)
191 cd08574 GDPD_GDE_2_3_6 Glycero 93.5 0.079 1.7E-06 54.3 4.2 40 137-177 15-54 (252)
192 cd08601 GDPD_SaGlpQ_like Glyce 92.9 0.11 2.4E-06 53.0 4.4 41 136-177 13-53 (256)
193 cd08580 GDPD_Rv2277c_like Glyc 92.8 0.14 3.1E-06 52.9 4.9 42 135-177 12-53 (263)
194 cd08607 GDPD_GDE5 Glycerophosp 92.8 0.13 2.8E-06 53.6 4.7 49 129-178 12-60 (290)
195 cd08581 GDPD_like_1 Glyceropho 92.7 0.12 2.7E-06 52.1 4.2 40 137-177 12-51 (229)
196 cd08612 GDPD_GDE4 Glycerophosp 92.6 0.13 2.9E-06 54.0 4.5 40 137-177 40-79 (300)
197 PRK11143 glpQ glycerophosphodi 92.5 0.16 3.5E-06 54.7 5.0 42 135-177 38-79 (355)
198 KOG2060 Rab3 effector RIM1 and 92.4 0.11 2.4E-06 55.1 3.4 107 466-578 268-379 (405)
199 cd08605 GDPD_GDE5_like_1_plant 92.3 0.14 3E-06 53.2 4.1 38 138-176 25-62 (282)
200 cd08600 GDPD_EcGlpQ_like Glyce 92.3 0.15 3.3E-06 54.1 4.5 42 135-177 12-53 (318)
201 cd05023 S-100A11 S-100A11: S-1 92.2 0.55 1.2E-05 40.3 6.9 64 27-97 10-79 (89)
202 KOG1327 Copine [Signal transdu 92.0 0.31 6.7E-06 54.5 6.5 86 512-597 43-133 (529)
203 cd08559 GDPD_periplasmic_GlpQ_ 91.8 0.16 3.5E-06 53.2 4.0 41 136-177 13-53 (296)
204 cd08571 GDPD_SHV3_plant Glycer 91.8 0.17 3.6E-06 53.4 4.0 41 137-178 14-54 (302)
205 cd08609 GDPD_GDE3 Glycerophosp 91.8 0.18 3.9E-06 53.5 4.3 49 125-177 31-79 (315)
206 cd05024 S-100A10 S-100A10: A s 91.7 0.84 1.8E-05 39.5 7.4 64 27-97 9-75 (91)
207 cd05026 S-100Z S-100Z: S-100Z 91.5 0.86 1.9E-05 39.3 7.5 65 26-97 10-80 (93)
208 cd08606 GDPD_YPL110cp_fungi Gl 91.5 0.18 4E-06 52.4 3.9 39 138-177 24-62 (286)
209 cd05030 calgranulins Calgranul 91.5 0.57 1.2E-05 40.0 6.3 64 27-98 9-79 (88)
210 PRK09454 ugpQ cytoplasmic glyc 91.3 0.19 4.1E-06 51.3 3.7 41 136-177 20-60 (249)
211 cd08570 GDPD_YPL206cp_fungi Gl 91.0 0.3 6.6E-06 49.2 4.8 41 136-177 11-51 (234)
212 cd08602 GDPD_ScGlpQ1_like Glyc 90.7 0.26 5.5E-06 52.2 4.1 43 135-178 12-54 (309)
213 cd08583 PI-PLCc_GDPD_SF_unchar 90.3 0.37 7.9E-06 48.7 4.7 40 137-177 14-53 (237)
214 PF10358 NT-C2: N-terminal C2 90.3 7.4 0.00016 35.7 13.1 118 467-599 7-138 (143)
215 PF13833 EF-hand_8: EF-hand do 90.3 0.75 1.6E-05 35.0 5.4 51 39-97 2-52 (54)
216 cd05022 S-100A13 S-100A13: S-1 90.3 1.1 2.3E-05 38.6 6.8 64 27-98 9-75 (89)
217 cd08604 GDPD_SHV3_repeat_2 Gly 90.0 0.35 7.5E-06 50.9 4.3 42 135-177 12-53 (300)
218 smart00142 PI3K_C2 Phosphoinos 89.7 1.5 3.1E-05 38.4 7.4 75 469-549 13-91 (100)
219 cd08695 C2_Dock-B C2 domains f 89.4 2 4.4E-05 42.1 8.8 55 510-564 53-111 (189)
220 PTZ00268 glycosylphosphatidyli 89.3 3.8 8.2E-05 44.4 11.6 107 144-257 90-207 (380)
221 cd08572 GDPD_GDE5_like Glycero 89.3 0.43 9.3E-06 50.0 4.4 43 135-178 19-61 (293)
222 cd08610 GDPD_GDE6 Glycerophosp 88.8 0.47 1E-05 50.4 4.3 43 135-178 34-76 (316)
223 cd05025 S-100A1 S-100A1: S-100 87.9 1.9 4.2E-05 36.8 6.9 65 26-97 9-79 (92)
224 KOG1326 Membrane-associated pr 87.8 0.33 7.2E-06 57.2 2.5 98 469-577 208-316 (1105)
225 cd08694 C2_Dock-A C2 domains f 86.8 3.9 8.5E-05 40.3 9.0 68 510-577 53-131 (196)
226 PF14429 DOCK-C2: C2 domain in 86.7 2.5 5.4E-05 41.1 7.7 67 511-577 60-135 (184)
227 PF01023 S_100: S-100/ICaBP ty 86.5 0.93 2E-05 33.7 3.4 28 27-54 7-37 (44)
228 COG0584 UgpQ Glycerophosphoryl 86.3 0.78 1.7E-05 46.7 4.1 37 138-175 20-56 (257)
229 cd08578 GDPD_NUC-2_fungi Putat 86.2 0.95 2.1E-05 47.7 4.7 52 120-178 3-54 (300)
230 cd08585 GDPD_like_3 Glyceropho 85.8 0.75 1.6E-05 46.7 3.6 39 137-177 20-58 (237)
231 cd08613 GDPD_GDE4_like_1 Glyce 85.7 0.8 1.7E-05 48.4 3.8 39 138-177 60-98 (309)
232 PF13499 EF-hand_7: EF-hand do 85.5 2.6 5.7E-05 33.1 6.0 64 28-96 2-66 (66)
233 PF15627 CEP76-C2: CEP76 C2 do 85.5 12 0.00025 35.8 11.1 126 465-597 7-151 (156)
234 cd00051 EFh EF-hand, calcium b 85.0 4.5 9.8E-05 30.0 6.9 60 28-96 2-62 (63)
235 cd08608 GDPD_GDE2 Glycerophosp 84.9 0.99 2.2E-05 48.6 4.2 41 136-177 14-54 (351)
236 smart00027 EH Eps15 homology d 84.8 4 8.7E-05 35.1 7.2 61 26-97 10-71 (96)
237 KOG1327 Copine [Signal transdu 84.7 1.3 2.7E-05 49.8 4.9 81 489-569 152-236 (529)
238 cd05027 S-100B S-100B: S-100B 84.2 5.2 0.00011 34.2 7.5 64 27-97 9-78 (88)
239 cd08679 C2_DOCK180_related C2 84.1 2.4 5.2E-05 41.0 6.1 66 513-578 55-132 (178)
240 cd08560 GDPD_EcGlpQ_like_1 Gly 83.8 1.2 2.5E-05 48.2 4.2 40 136-176 29-69 (356)
241 KOG2258 Glycerophosphoryl dies 83.5 1.5 3.2E-05 47.1 4.8 40 137-177 82-121 (341)
242 PF09069 EF-hand_3: EF-hand; 82.7 2.5 5.4E-05 36.5 4.9 63 28-99 5-76 (90)
243 PTZ00183 centrin; Provisional 82.1 5.4 0.00012 36.7 7.5 66 24-98 88-154 (158)
244 PTZ00184 calmodulin; Provision 82.0 5.2 0.00011 36.2 7.3 65 25-98 83-148 (149)
245 cd05031 S-100A10_like S-100A10 80.2 7.5 0.00016 33.3 7.2 66 26-98 8-79 (94)
246 PF05386 TEP1_N: TEP1 N-termin 80.2 0.39 8.5E-06 32.2 -0.7 14 196-209 8-21 (30)
247 cd00213 S-100 S-100: S-100 dom 79.4 8.6 0.00019 32.3 7.2 67 25-98 7-79 (88)
248 cd00052 EH Eps15 homology doma 77.8 11 0.00023 29.3 6.9 58 29-97 2-60 (67)
249 PF05517 p25-alpha: p25-alpha 77.7 4.9 0.00011 38.1 5.7 63 28-97 1-68 (154)
250 PF12416 DUF3668: Cep120 prote 76.6 25 0.00053 37.8 11.1 117 469-599 2-135 (340)
251 KOG0904 Phosphatidylinositol 3 74.4 15 0.00032 43.6 9.2 100 467-575 343-468 (1076)
252 cd08603 GDPD_SHV3_repeat_1 Gly 73.7 3.6 7.9E-05 43.3 4.0 41 137-178 14-56 (299)
253 cd08621 PI-PLCXDc_like_2 Catal 65.7 16 0.00036 38.5 6.8 92 114-206 6-113 (300)
254 KOG4306 Glycosylphosphatidylin 64.5 26 0.00057 36.8 7.9 93 146-246 74-173 (306)
255 KOG0906 Phosphatidylinositol 3 61.2 8.3 0.00018 44.2 3.7 84 494-577 47-138 (843)
256 PTZ00183 centrin; Provisional 57.1 41 0.00089 30.7 7.2 63 26-97 17-80 (158)
257 PF00036 EF-hand_1: EF hand; 56.5 15 0.00033 24.6 3.1 27 27-53 1-28 (29)
258 KOG1329 Phospholipase D1 [Lipi 56.3 16 0.00035 43.4 5.1 100 494-598 138-242 (887)
259 cd08696 C2_Dock-C C2 domains f 55.6 47 0.001 32.4 7.5 66 511-576 55-131 (179)
260 cd08697 C2_Dock-D C2 domains f 54.3 31 0.00067 33.8 6.0 67 511-577 57-138 (185)
261 PF13405 EF-hand_6: EF-hand do 52.0 18 0.00039 24.2 2.9 27 27-53 1-28 (31)
262 PTZ00184 calmodulin; Provision 50.7 61 0.0013 29.0 7.2 64 26-98 11-75 (149)
263 PF11422 IBP39: Initiator bind 47.7 83 0.0018 30.6 7.5 100 25-130 18-139 (181)
264 PF11618 DUF3250: Protein of u 45.6 74 0.0016 28.3 6.6 81 512-596 13-105 (107)
265 KOG0027 Calmodulin and related 45.0 76 0.0016 29.4 7.0 65 25-98 84-149 (151)
266 COG5126 FRQ1 Ca2+-binding prot 44.9 67 0.0014 30.8 6.5 67 23-98 89-156 (160)
267 smart00054 EFh EF-hand, calciu 43.4 37 0.00081 20.4 3.3 27 27-53 1-28 (29)
268 PF14788 EF-hand_10: EF hand; 42.2 51 0.0011 25.4 4.2 47 41-96 1-47 (51)
269 PRK07259 dihydroorotate dehydr 41.7 76 0.0016 33.1 7.1 79 132-223 95-180 (301)
270 PRK09071 hypothetical protein; 41.3 21 0.00045 38.1 2.8 60 131-190 48-132 (323)
271 COG5126 FRQ1 Ca2+-binding prot 39.9 1E+02 0.0023 29.5 7.0 63 25-97 16-82 (160)
272 PF15625 CC2D2AN-C2: CC2D2A N- 39.8 82 0.0018 30.2 6.4 67 495-568 38-107 (168)
273 PF08726 EFhand_Ca_insen: Ca2+ 39.7 18 0.00038 29.7 1.5 33 23-55 3-35 (69)
274 KOG0027 Calmodulin and related 38.6 1.1E+02 0.0024 28.3 7.0 64 26-98 8-72 (151)
275 cd02810 DHOD_DHPD_FMN Dihydroo 33.2 1.7E+02 0.0037 30.2 8.1 90 131-231 101-195 (289)
276 cd00252 SPARC_EC SPARC_EC; ext 32.4 1.8E+02 0.0038 26.3 6.9 60 25-97 47-107 (116)
277 PF12738 PTCB-BRCT: twin BRCT 31.5 39 0.00084 26.4 2.3 29 124-156 32-60 (63)
278 PTZ00466 actin-like protein; P 28.7 64 0.0014 35.1 4.2 45 183-227 86-135 (380)
279 PTZ00452 actin; Provisional 28.2 66 0.0014 34.9 4.1 45 183-227 79-129 (375)
280 PLN02591 tryptophan synthase 27.8 44 0.00095 34.3 2.5 94 137-233 11-114 (250)
281 PRK05395 3-dehydroquinate dehy 27.7 60 0.0013 30.6 3.1 66 135-211 22-103 (146)
282 PF11478 Tachystatin_B: Antimi 27.3 22 0.00047 25.1 0.1 16 144-162 1-16 (42)
283 PTZ00281 actin; Provisional 26.6 66 0.0014 34.9 3.7 45 183-227 80-130 (376)
284 KOG1452 Predicted Rho GTPase-a 25.7 1.7E+02 0.0037 31.1 6.2 81 466-556 50-130 (442)
285 KOG0034 Ca2+/calmodulin-depend 24.5 2.7E+02 0.0059 27.3 7.2 69 27-99 105-176 (187)
286 PRK08136 glycosyl transferase 24.4 73 0.0016 33.9 3.5 25 166-190 109-134 (317)
287 PF00022 Actin: Actin; InterP 24.2 80 0.0017 34.0 3.8 45 183-227 73-123 (393)
288 cd08687 C2_PKN-like C2 domain 23.9 2.4E+02 0.0053 24.7 5.8 62 521-595 31-92 (98)
289 PRK14607 bifunctional glutamin 23.6 63 0.0014 36.9 3.0 62 129-190 233-321 (534)
290 smart00268 ACTIN Actin. ACTIN 23.1 81 0.0018 33.8 3.6 45 183-227 74-124 (373)
291 PF13202 EF-hand_5: EF hand; P 22.7 1.1E+02 0.0023 19.7 2.7 24 28-51 1-25 (25)
292 cd00466 DHQase_II Dehydroquina 22.5 77 0.0017 29.7 2.8 68 134-212 19-102 (140)
293 KOG2564 Predicted acetyltransf 22.1 1.1E+02 0.0023 32.3 4.0 74 126-203 62-150 (343)
294 PLN02964 phosphatidylserine de 21.6 2.5E+02 0.0055 32.9 7.3 64 27-99 180-244 (644)
295 PF00977 His_biosynth: Histidi 21.3 1.5E+02 0.0033 29.7 4.9 39 152-194 123-161 (229)
296 PF13860 FlgD_ig: FlgD Ig-like 21.2 4.7E+02 0.01 21.5 8.9 64 528-597 13-79 (81)
297 PF14909 SPATA6: Spermatogenes 21.2 6.9E+02 0.015 23.5 9.2 80 469-563 4-95 (140)
298 PTZ00004 actin-2; Provisional 21.1 1.1E+02 0.0024 33.1 4.2 46 183-228 80-131 (378)
299 PF07162 B9-C2: Ciliary basal 21.0 3.1E+02 0.0066 26.2 6.8 57 522-579 56-117 (168)
300 PF05673 DUF815: Protein of un 20.9 2.1E+02 0.0045 29.5 5.8 84 124-230 51-136 (249)
301 KOG0034 Ca2+/calmodulin-depend 20.1 3.3E+02 0.0072 26.7 6.8 62 24-97 28-94 (187)
No 1
>PLN02230 phosphoinositide phospholipase C 4
Probab=100.00 E-value=8.8e-166 Score=1358.84 Aligned_cols=590 Identities=61% Similarity=1.010 Sum_probs=506.3
Q ss_pred CCceeeccCCccccccCCccCCCCchhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHhhhcccc
Q 007473 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHG-GVSIEDAEQIVDQVLQRWHHI 79 (602)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~r~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~-~~~~~~~~~ii~~~~~~~~~~ 79 (602)
||+|++|+ ||.|+|+...+.+|+||..||.+|+++...||+++|.+||+++|+++ ..+.++|++||++|++...+.
T Consensus 7 m~~~~~~~---~~~~~~~~~~~~p~~ei~~lf~~~s~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (598)
T PLN02230 7 MGSYKFCL---IFTRKFRMTESGPVADVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHI 83 (598)
T ss_pred CccceEEE---EecCccccccCCCcHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhcccc
Confidence 78999999 99999999999999999999999998779999999999999999654 457899999999998654333
Q ss_pred ccccCCCcCHHHHHHHhcCCCCCCCCCCCCCcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEe
Q 007473 80 ARFTRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDL 159 (602)
Q Consensus 80 ~~~~~~~l~~~gF~~~L~S~~~n~~~~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~ 159 (602)
....++.|+++||++||+|.+.|.|.+..|+|||++|||||||||||||||+|+||.|+||+|+|++||++|||||||||
T Consensus 84 ~~~~~~~~~~~~F~~yL~s~~~~~~~~~~v~qDM~~PLshYfI~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~ 163 (598)
T PLN02230 84 AKFTRRNLTLDDFNYYLFSTDLNPPIADQVHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDL 163 (598)
T ss_pred ccccccccCHHHHHHHHcCcccCCcccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEec
Confidence 33445679999999999998878888889999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCCCCC
Q 007473 160 WPNSAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKE 239 (602)
Q Consensus 160 WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~ 239 (602)
|||++ ++|+||||||||++|+|+|||+||++|||++|+||||||||||||++||.+||+||+++|||+||.++.+....
T Consensus 164 wdg~~-~ep~v~HG~t~t~~i~f~~v~~~I~~~aF~~s~yPvIlslE~hcs~~~Q~~~a~~~~~~~Gd~L~~~~~~~~~~ 242 (598)
T PLN02230 164 WPRGT-DDVCVKHGRTLTKEVKLGKCLDSIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSEGCQE 242 (598)
T ss_pred cCCCC-CCcEEeeCCCCcCCcCHHHHHHHHHHhccCCCCCCeEEEeccCCCHHHHHHHHHHHHHHHhhhhccCCCcccCC
Confidence 99876 67999999999999999999999999999999999999999999999999999999999999999987666789
Q ss_pred CCChhhccccEEEecCCCCccccccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcc-hhh
Q 007473 240 FPSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDN-TEA 318 (602)
Q Consensus 240 lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 318 (602)
||||++||||||||+|++++.++....... +.......++++.|+.+...+.....+.+.. .......+...++ .+.
T Consensus 243 lpsP~~Lk~kilik~Kk~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~ 320 (598)
T PLN02230 243 FPSPEELKEKILISTKPPKEYLEANDAKEK-DNGEKGKDSDEDVWGKEPEDLISTQSDLDKV-TSSVNDLNQDDEERGSC 320 (598)
T ss_pred CCChHHHcCCEEEEecCCcccccccccccc-cccccccccchhhhccccccccccccccccc-cccccccccchhccccc
Confidence 999999999999999998765544321111 0111112233334444333222211110000 0000000000000 000
Q ss_pred hccccccccccccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCC
Q 007473 319 CDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNS 398 (602)
Q Consensus 319 ~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidS 398 (602)
...++...++++|++||+|+.+++++++..+.+..+.+++++||+|+++.++++.++.+|++||++||+||||+|+||||
T Consensus 321 ~~~~~~~~~~~els~Li~y~~~~~~~~~~~~~~~~~~~v~~~SlsE~~~~~~~~~~~~~~v~~nk~~L~RIYPkG~RvdS 400 (598)
T PLN02230 321 ESDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNS 400 (598)
T ss_pred cccccchhcCHHHhhheeeecCccCCCcchhhhcCccceeeccccHHHHHHHHHhhhHHHHHhhhhhceeeCCCCCcCCC
Confidence 11112335678999999999999999999888877878899999999999999999999999999999999999999999
Q ss_pred CCCCCcccccccceEeeccccCCCcceeeecccccccccceeeecCCccCCCCCCCCcCCCCCCCCcceeEEEEEEeccC
Q 007473 399 SNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDG 478 (602)
Q Consensus 399 SN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~ 478 (602)
|||||+.||++|||||||||||+|++||||+|||+.||+|||||||++||+..+.++.|||....+.+.+|+|+|++|++
T Consensus 401 SNynP~~~W~~GcQMVALN~Qt~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~~~fdP~~~~~~~~~L~V~VisGq~ 480 (598)
T PLN02230 401 SNYKPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFYPKDNSCPKKTLKVKVCMGDG 480 (598)
T ss_pred CCCCchhHhcCceEEeeecccCCChHHHhhcchhccCCCCCceECCHHhcCCCccccccCCCcCCCcCcEEEEEEEEccC
Confidence 99999999999999999999999999999999999999999999999999976655689998877677889999999999
Q ss_pred cccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccE
Q 007473 479 WYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAG 558 (602)
Q Consensus 479 L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lG 558 (602)
|++++++...+.++++||||+|+|+|.|.|..+++|+++.|++||+|||+|+|.+..||+|+|||.|+|+|...+++|+|
T Consensus 481 ~~l~~~k~~~~~~s~~DpyV~Vei~Gvp~D~~~~kT~v~~n~~nP~Wneef~F~l~vPELAllRf~V~d~d~~~~ddfiG 560 (598)
T PLN02230 481 WLLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFIFPLAVPELALLRVEVHEHDINEKDDFGG 560 (598)
T ss_pred ccCCCccccCCCCCCCCceEEEEEEECCCCCcccceeccCCCCCCccCCeeEEEEEcCceeEEEEEEEECCCCCCCCEEE
Confidence 98776666667788999999999999999999999998888899999999999999999999999999999888899999
Q ss_pred EEEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEE
Q 007473 559 QTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 559 q~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
|+|+||.+|++|||||||+|..|+++.+++|||||+|.
T Consensus 561 Q~~lPv~~Lr~GyR~V~L~~~~G~~l~~~~Ll~~f~~~ 598 (598)
T PLN02230 561 QTCLPVSEIRQGIHAVPLFNRKGVKYSSTRLLMRFEFV 598 (598)
T ss_pred EEEcchHHhhCccceEeccCCCcCCCCCCeeEEEEEeC
Confidence 99999999999999999999999999999999999873
No 2
>PLN02222 phosphoinositide phospholipase C 2
Probab=100.00 E-value=8.5e-162 Score=1325.84 Aligned_cols=575 Identities=55% Similarity=0.994 Sum_probs=493.9
Q ss_pred ceeeccCCccccccCCccCCCCchhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccc
Q 007473 3 SYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARF 82 (602)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~r~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~ 82 (602)
+|++|+ ||.|+|+.....+|+||..||.+|++ ...||.++|.+||+++|++..++.++|.+||++|+.. .
T Consensus 5 ~~~~~~---~~~~~~~~~~~~~~~ei~~if~~~~~-~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~------~ 74 (581)
T PLN02222 5 TYKVCF---CFRRRFRYTASEAPREIKTIFEKYSE-NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSL------L 74 (581)
T ss_pred ceeEEE---EeccccccccCCCcHHHHHHHHHhcC-CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhh------h
Confidence 799999 99999999999999999999999987 4799999999999999999888899999999998621 1
Q ss_pred cCCCcCHHHHHHHhcCCCCCCCC-CCCCCcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeec
Q 007473 83 TRRSLTVEDFHHYLFSTDLNPPL-GNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWP 161 (602)
Q Consensus 83 ~~~~l~~~gF~~~L~S~~~n~~~-~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wd 161 (602)
.++.|+++||++||+|. .|.++ +..|+|||++|||||||||||||||+||||.|+||+|+|++||++|||||||||||
T Consensus 75 ~~~~~~~~gF~~yL~s~-~n~~~~~~~v~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wd 153 (581)
T PLN02222 75 HRNGLHLDAFFKYLFGD-NNPPLALHEVHHDMDAPISHYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWP 153 (581)
T ss_pred hccCcCHHHHHHHhcCC-CCCCCccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEecc
Confidence 24679999999999985 67777 55789999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCC
Q 007473 162 NSAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES-ECLKEF 240 (602)
Q Consensus 162 G~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~l 240 (602)
|+++++|+||||||||++|+|+|||+||++|||++|+||||||||||||++||.+||+||+++|||+||+++. +....|
T Consensus 154 g~~~~~~~v~HG~tlt~~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~~~~~~g~~L~~~~~~~~~~~l 233 (581)
T PLN02222 154 NSDKDDIDVLHGMTLTTPVGLIKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEF 233 (581)
T ss_pred CCCCCCCeEeeCCcccCceeHHHHHHHHHHhcccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCC
Confidence 9887778999999999999999999999999999999999999999999999999999999999999999874 446799
Q ss_pred CChhhccccEEEecCCCCccccccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhc
Q 007473 241 PSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACD 320 (602)
Q Consensus 241 PSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (602)
|||++||||||||+|++++..+..... ........+++..++.+.++........+.++ .... ++++++++.
T Consensus 234 psP~~Lk~kilik~K~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~ 305 (581)
T PLN02222 234 PSPNSLKKRIIISTKPPKEYKEGKDDE---VVQKGKDLGDEEVWGREVPSFIQRNKSVDKND--SNGD---DDDDDDDGE 305 (581)
T ss_pred CChHHHCCCEEEEecCCcccccccccc---cccccccccccccccccccccccccccccccc--cccc---ccccccccc
Confidence 999999999999999987654432100 00001111122233444333222111111100 0000 000111112
Q ss_pred cccccccccccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCC
Q 007473 321 RVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSN 400 (602)
Q Consensus 321 ~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN 400 (602)
.+.+...++++++|++++.+++++++...++..+.+++++||+|+++.+++++++.+|++||++||+||||+|+|+||||
T Consensus 306 ~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~L~RiYP~G~RvdSSN 385 (581)
T PLN02222 306 DKSKKNAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSEEQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSN 385 (581)
T ss_pred cccccccCHHhhhheeeecccccCccchhhhcCcccccccccCHHHHHHHHHhhhHHHHHHhhhhceeeCCCCCcCcCCC
Confidence 22333456889999999999988888777766677788999999999999999999999999999999999999999999
Q ss_pred CCCcccccccceEeeccccCCCcceeeecccccccccceeeecCCccCCCCCCCCcCCCCCCCCcceeEEEEEEeccCcc
Q 007473 401 YKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWY 480 (602)
Q Consensus 401 ~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L~ 480 (602)
|||+.||++|||||||||||+|++||||+|||+.||+|||||||++||+....+..|||....|++.+|+|+|++|++|+
T Consensus 386 ynP~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~~~~~~~~L~V~Visgq~~~ 465 (581)
T PLN02222 386 YNPLVGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLRVTIYMGEGWY 465 (581)
T ss_pred CCchhHhcCCcEEeeccccCCChhhhhhcchhccCCCCceEECCHHhccCCccccccCCCCCCCccceEEEEEEEccccc
Confidence 99999999999999999999999999999999999999999999999987655557999988787889999999999987
Q ss_pred cCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEE
Q 007473 481 LDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQT 560 (602)
Q Consensus 481 ~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~ 560 (602)
++.++...+..+++||||+|+|.|.|.|..++||+++.+|+||+|||+|+|.+..||+|+|||.|+|+|....++|+||+
T Consensus 466 l~~~~~~~~~~~~~dpyV~Vei~G~p~D~~~~rTk~v~nn~nP~W~e~f~F~i~~PeLAllRf~V~d~D~~~~ddfigq~ 545 (581)
T PLN02222 466 FDFRHTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLEVHEYDMSEKDDFGGQT 545 (581)
T ss_pred CCCCccccCCCCCCCeeEEEEEeccCCCcceeeeEecCCCCCcccCCeeEEEEEcCceeEEEEEEEECCCCCCCcEEEEE
Confidence 76555556667889999999999999999999999999999999999999999999999999999999987789999999
Q ss_pred EEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEE
Q 007473 561 CLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 561 ~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
++||++|++|||||||+|..|+++.+++|||||++.
T Consensus 546 ~lPv~~Lr~GyR~V~L~~~~g~~l~~a~Lfv~~~~~ 581 (581)
T PLN02222 546 CLPVWELSQGIRAFPLHSRKGEKYKSVKLLVKVEFV 581 (581)
T ss_pred EcchhhhhCccceEEccCCCcCCCCCeeEEEEEEeC
Confidence 999999999999999999999999999999999873
No 3
>PLN02952 phosphoinositide phospholipase C
Probab=100.00 E-value=4.1e-159 Score=1308.43 Aligned_cols=578 Identities=62% Similarity=1.040 Sum_probs=494.3
Q ss_pred ceeeccCCccccccCCccCCCCchhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccc
Q 007473 3 SYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARF 82 (602)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~r~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~ 82 (602)
+|..|. ||+|.++...+++|+||..||.+|++++..||+++|.+||+++|++..++.++|++|+++|.+...+...+
T Consensus 18 ~f~~f~---~f~~~~k~~~~~~r~ei~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~~~ 94 (599)
T PLN02952 18 NYKMFN---LFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVTRY 94 (599)
T ss_pred CHHHHH---HHHHHhccccCCChHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhccccccc
Confidence 577788 99999999999999999999999998889999999999999999998889999999999886443333334
Q ss_pred cCCCcCHHHHHHHhcCCCCCCCCCCCCCcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecC
Q 007473 83 TRRSLTVEDFHHYLFSTDLNPPLGNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPN 162 (602)
Q Consensus 83 ~~~~l~~~gF~~~L~S~~~n~~~~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG 162 (602)
.+..|+++||++||+|.+.|.|.+..|+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||
T Consensus 95 ~~~~l~~~~F~~~l~s~~~~~p~~~~v~qdm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg 174 (599)
T PLN02952 95 TRHGLNLDDFFHFLLYDDLNGPITPQVHHDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDLWPG 174 (599)
T ss_pred cccCcCHHHHHHHHcCccccccccccccccCCCchhhheeeccccccccCCccCCcCCHHHHHHHHHcCCcEEEEEeecC
Confidence 45679999999999998888889889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCC
Q 007473 163 SAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEFPS 242 (602)
Q Consensus 163 ~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPS 242 (602)
+++++|||||||||||+|+|+|||+||++|||++|+||||||||||||++||.+||+||+++|||+||.|+.+....|||
T Consensus 175 ~~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~p~~~~~~~lps 254 (599)
T PLN02952 175 STKDEILVLHGRTLTTPVPLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESDSLVQFPS 254 (599)
T ss_pred CCCCCCEEEeCCccccCcCHHHHHHHHHHHhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCCCC
Confidence 98888999999999999999999999999999999999999999999999999999999999999999987666779999
Q ss_pred hhhccccEEEecCCCCccccccccCc-ccc--ccc-cCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhh
Q 007473 243 PEELKYRIIISTKPPKERREKKGINN-RKD--ISA-KGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEA 318 (602)
Q Consensus 243 P~~Lk~KIlik~K~~~~~~~~~~~~~-~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (602)
|++||||||||+|++++.++...... .+. ... ....++++. +...+.......+ .. ...+...
T Consensus 255 P~~Lk~kilik~Kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--------~~--~~~~~~~ 321 (599)
T PLN02952 255 PESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEETE---EAQTLESMLFEQE--------AD--SRSDSDQ 321 (599)
T ss_pred hHHhCCCEEEEecCCchhccccccccccccccCCcccccCCcccc---ccccccccccccc--------cc--ccccccc
Confidence 99999999999999876554321100 000 000 000000000 0000000000000 00 0000000
Q ss_pred hccccccccccccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCC
Q 007473 319 CDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNS 398 (602)
Q Consensus 319 ~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidS 398 (602)
.+.+.....++++++|+.|+.+++++.+.+.+...+.+++++||||+++.+++++++.+|++||++||+||||+|+|+||
T Consensus 322 ~~~~~~~~~~~~~~~l~~~~~~k~~~~~~~~~~~~~~~~~~~SlsE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~R~dS 401 (599)
T PLN02952 322 DDNKSGELQKPAYKRLITIHAGKPKGTLKDAMKVAVDKVRRLSLSEQELEKAATTNGQDVVRFTQRNILRIYPKGTRITS 401 (599)
T ss_pred hhhhcccccchhhhhheEEeccccccccchhhhcccccccccccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCcC
Confidence 01122234567899999999998888777766655666788999999999999999999999999999999999999999
Q ss_pred CCCCCcccccccceEeeccccCCCcceeeecccccccccceeeecCCccCCCCCCCCcCCCCCCCCcceeEEEEEEeccC
Q 007473 399 SNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDG 478 (602)
Q Consensus 399 SN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~ 478 (602)
|||||+.||++|||||||||||+|++||||+|||+.||+|||||||++||...+.++.|||....|++++|+|+||+|++
T Consensus 402 sNy~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVlKP~~lr~~~~~~~~fdp~~~~~~~~~L~V~VisGq~ 481 (599)
T PLN02952 402 SNYKPLIGWMHGAQMIAFNMQGYGKSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDPKKKLPVKKTLKVKVYLGDG 481 (599)
T ss_pred CCCCchhHhcCccEEeeecccCCChHHHhhhchhccCCCCCceECCHHHcccCCcccccCCCCCCCccceEEEEEEECcc
Confidence 99999999999999999999999999999999999999999999999999865545679999888888899999999999
Q ss_pred cccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccE
Q 007473 479 WYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAG 558 (602)
Q Consensus 479 L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lG 558 (602)
|+++......+.++++||||+|.+.|.|.|..+++|+++.||+||+|||+|+|.+..||+|+|+|.|+|+|..+.++|+|
T Consensus 482 l~lp~~~~~~~~~~~~D~yV~V~i~G~p~D~~~~kTkvi~nN~nPvWnE~F~F~i~~PELAllrf~V~D~D~~~~ddfiG 561 (599)
T PLN02952 482 WRLDFSHTHFDSYSPPDFYTKMYIVGVPADNAKKKTKIIEDNWYPAWNEEFSFPLTVPELALLRIEVREYDMSEKDDFGG 561 (599)
T ss_pred cCCCCccccCCccCCCCceEEEEEeccCCCCcceeeeeccCCCCcccCCeeEEEEEcCCccEEEEEEEecCCCCCCCeEE
Confidence 98764444567778899999999999999999999999999999999999999999999999999999999888899999
Q ss_pred EEEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEE
Q 007473 559 QTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 559 q~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
|+++||++|++|||||||+|..|++++.++|||||+|.
T Consensus 562 q~~lPv~~Lr~GyR~VpL~~~~G~~l~~a~Llv~f~~~ 599 (599)
T PLN02952 562 QTCLPVSELRPGIRSVPLHDKKGEKLKNVRLLMRFIFV 599 (599)
T ss_pred EEEcchhHhcCCceeEeCcCCCCCCCCCEEEEEEEEeC
Confidence 99999999999999999999999999999999999873
No 4
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-159 Score=1299.26 Aligned_cols=557 Identities=43% Similarity=0.697 Sum_probs=486.0
Q ss_pred CCceeeccCCccccccCCccCCCCchhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccc
Q 007473 1 MGSYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIA 80 (602)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~r~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~ 80 (602)
+++|++|+ |++++|+....+ ||||.++|.+|+.+..+|+.++|.+||+++|++..++.+.|++||++|+....
T Consensus 184 ~~~~k~~~---~~~~~~~~~~~~-rpev~~~f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~--- 256 (746)
T KOG0169|consen 184 SQTGKLEE---EEFVKFRKELTK-RPEVYFLFVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKE--- 256 (746)
T ss_pred hccceehH---HHHHHHHHhhcc-CchHHHHHHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhh---
Confidence 46899999 999999887665 55999999999998999999999999999999999999999999999985432
Q ss_pred cccCCCcCHHHHHHHhcCCCCCC--CCCCCCCcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEE
Q 007473 81 RFTRRSLTVEDFHHYLFSTDLNP--PLGNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELD 158 (602)
Q Consensus 81 ~~~~~~l~~~gF~~~L~S~~~n~--~~~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD 158 (602)
....+.|+++||++||+|+++|. |.+..|||||++|||||||+||||||||||||.|+||+|+||+||++||||||||
T Consensus 257 ~~~~~~l~ldgF~~yL~S~~~~~fdp~~~~V~qDM~qPLsHYFI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD 336 (746)
T KOG0169|consen 257 FRRHGLLSLDGFTRYLFSPDCNPFDPIHRKVHQDMDQPLSHYFISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELD 336 (746)
T ss_pred ccccceecHHHHHHHhcCccCCCCCcccchhhhcccCcchhheEeccccceecccccCCccccHHHHHHHHhCCeEEEEe
Confidence 11235699999999999988776 7799999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CC
Q 007473 159 LWPNSAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE-CL 237 (602)
Q Consensus 159 ~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~ 237 (602)
||||++ ++|+|||||||||+|.|++||+||++|||++|+|||||||||||+++||++||++|++||||+||+++.+ ..
T Consensus 337 ~Wdg~~-~epvV~HG~TlTs~I~l~~vl~aIk~~AF~~S~YPvIlsLE~Hc~~~qQ~~mA~~~~~ifGd~Ly~~~~~~~~ 415 (746)
T KOG0169|consen 337 CWDGPN-GEPVVYHGHTLTSKILLRDVLRAIKKYAFVTSPYPVILTLENHCSPDQQAKMAQMLKEIFGDMLYTPPPDSSL 415 (746)
T ss_pred cccCCC-CCeeEecCcccccceeHHHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHhhhheeccCCCCcc
Confidence 999988 6899999999999999999999999999999999999999999999999999999999999999998865 68
Q ss_pred CCCCChhhccccEEEecCCCCccccccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchh
Q 007473 238 KEFPSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTE 317 (602)
Q Consensus 238 ~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (602)
..||||++||||||||+|++++.+..... ++.+.. ..+++++.+.+.+ .+....
T Consensus 416 ~~lPSPe~LK~KILik~Kk~~~~~~~~~~--------------------~~~~~~--~~d~~~~~e~s~e----~~~~~~ 469 (746)
T KOG0169|consen 416 KELPSPEELKNKILIKGKKLKELLEADSK--------------------EPSSFE--VTDEDEDKESSTE----NDKSET 469 (746)
T ss_pred ccCcCHHHHhcCEEEecCCCCcccccccc--------------------cccccc--ccccccccccccc----cccccc
Confidence 99999999999999999998765543210 000000 0000000000000 000000
Q ss_pred hhccccccccccccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCC
Q 007473 318 ACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVN 397 (602)
Q Consensus 318 ~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~Rid 397 (602)
..+.+....++++|++||.|+.+++++++...++.+ .+++++||+|+++.|+++..+.+|++||+++|+||||+|+|+|
T Consensus 470 ~~~~~~~~~~~~els~Lv~~~~~~~~~~~~~~~~~~-~~~~~~S~sE~~~~k~~~~~~~~~v~~t~r~L~RvYP~~~R~d 548 (746)
T KOG0169|consen 470 DGQKKSRKILAPELSDLVAYHKSVPFGGFQLSLTVD-NKVERLSLSERKAKKLIKEYGPDFVRHTQRNLLRVYPKGLRVD 548 (746)
T ss_pred ccccchhhhhhHHHHHHHHHhhccccCCceeccccC-CccccCCccHHHHHHHHHHhhhHHHHHhHhheeeecCCccccC
Confidence 112223336889999999999999999888877765 5788999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccccceEeeccccCCCcceeeecccccccccceeeecCCccCCCCCCCCcCCCCCC-CCcceeEEEEEEec
Q 007473 398 SSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEK-LPVKKTLKVKAYMG 476 (602)
Q Consensus 398 SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~-~p~~~~L~V~Visa 476 (602)
||||||+.||++|||||||||||+|++||||+|||++||||||||||.+||+++ ..|+|... .|+..+|+|+|++|
T Consensus 549 SSNynPq~~W~~G~QmVAlN~Qt~G~~l~L~~G~Fr~NGgCGYVlKP~~L~~~~---~~F~P~~~~~~~~~tL~IkI~sG 625 (746)
T KOG0169|consen 549 SSNYNPQEFWNHGCQMVALNFQTPGRMLDLNQGMFRANGGCGYVLKPDFLLDSG---STFDPKSNLPPVKKTLKIKIISG 625 (746)
T ss_pred CCCCChHHHHhcCceEEEEecCCCChhhhhhhhhhccCCCccceECcHHHcCCC---CccCCCCCCCCCCceeEEEEEec
Confidence 999999999999999999999999999999999999999999999999999943 58999665 44555899999999
Q ss_pred cCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCC-CCCeeccEEEEEeecCCccEEEEEEEecCCCCCCC
Q 007473 477 DGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDN-WTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDE 555 (602)
Q Consensus 477 ~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn-~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd 555 (602)
++++.++..+.. ...+||||.|+|.|.|.|+.+++|+++.+| +||.|+|+|+|++..||+|+|||.|+|+|..++||
T Consensus 626 q~~~~~~~~~~~--~~~~dP~v~VeI~Gvp~D~~~~~Tk~v~~NgfnP~W~e~f~F~l~vPELAliRF~V~d~d~~~~dd 703 (746)
T KOG0169|consen 626 QGWLPDFGKTKF--GEISDPDVYVEIAGVPADCAEQKTKVVKNNGFNPIWDEEFEFQLSVPELALIRFEVHDYDYIGKDD 703 (746)
T ss_pred CcccCCCCCCcc--cccCCCCEEEEEcccccchhhhhceeeccCCcCcccCCeEEEEEeccceeEEEEEEEecCCCCccc
Confidence 999876544432 355799999999999999999999977655 89999999999999999999999999999999999
Q ss_pred ccEEEEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 556 FAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 556 ~lGq~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
|+||+|+|+.+|++|||||||+|..|+.+..++|||||+|.+
T Consensus 704 F~GQ~tlP~~~L~~GyRhVpL~~~~G~~~~~asLfv~i~~~~ 745 (746)
T KOG0169|consen 704 FIGQTTLPVSELRQGYRHVPLLSREGEALSSASLFVRIAIVE 745 (746)
T ss_pred ccceeeccHHHhhCceeeeeecCCCCccccceeEEEEEEEec
Confidence 999999999999999999999999999999999999999976
No 5
>PLN02228 Phosphoinositide phospholipase C
Probab=100.00 E-value=1.9e-157 Score=1288.36 Aligned_cols=558 Identities=48% Similarity=0.830 Sum_probs=480.2
Q ss_pred ceeeccCCccccccCCccCCCCchhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccc
Q 007473 3 SYLLCGLPACFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARF 82 (602)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~r~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~ 82 (602)
+|..|. ||.|+++..-..+|+||..||.+|+++ ..||.++|.+||+++|++...+.+.|++||++|++... ..
T Consensus 4 ~~~~~~---~~~~~~~~~~~~~~~ei~~if~~~s~~-~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~---~~ 76 (567)
T PLN02228 4 SFKVCF---CCSRSFKEKTREPPVSIKRLFEAYSRN-GKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNV---FH 76 (567)
T ss_pred cceEEE---EeCCcCCcCCCCCcHHHHHHHHHhcCC-CccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchh---hc
Confidence 689998 999999999999999999999999976 58999999999999999987888999999999984311 11
Q ss_pred cCCCcCHHHHHHHhcCCCCCCCC--CCCCCcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEee
Q 007473 83 TRRSLTVEDFHHYLFSTDLNPPL--GNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLW 160 (602)
Q Consensus 83 ~~~~l~~~gF~~~L~S~~~n~~~--~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~W 160 (602)
.++.|+++||++||+|. .|.++ +..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||
T Consensus 77 ~~~~~~~~gF~~yl~s~-~n~~~~~~~~v~qdm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~w 155 (567)
T PLN02228 77 HHGLVHLNAFYRYLFSD-TNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLW 155 (567)
T ss_pred ccCccCHHHHHHHhcCc-ccCCCCccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEec
Confidence 23569999999999985 57665 5679999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCCCCCC
Q 007473 161 PNSAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEF 240 (602)
Q Consensus 161 dG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~l 240 (602)
||+++++|||||||||||+|+|+|||+||++|||++|+||||||||||||.+||.+||+||+++|||+||.++.+....|
T Consensus 156 dg~~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~AF~~s~yPvIlslE~hc~~~qQ~~~a~~~~~~lg~~L~~~~~~~~~~l 235 (567)
T PLN02228 156 PNPSGNAAEVRHGRTLTSHEDLQKCLNAIKDNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCTSESTKHF 235 (567)
T ss_pred cCCCCCCCEEEeCCcccCceEHHHHHHHHHHhhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhHhhcCCCCCccCCC
Confidence 99887889999999999999999999999999999999999999999999999999999999999999999886667899
Q ss_pred CChhhccccEEEecCCCCccccccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhc
Q 007473 241 PSPEELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACD 320 (602)
Q Consensus 241 PSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (602)
|||++||||||||+|++++..+...... . ..+++++..+.. .. +. ..... + .
T Consensus 236 psP~~Lk~kilik~Kk~~~~~~~~~~~~---~--~~~~~~~~~~~~-~~---------~~-----------~~~~~-~-~ 287 (567)
T PLN02228 236 PSPEELKNKILISTKPPKEYLESKTVQT---T--RTPTVKETSWKR-VA---------DA-----------ENKIL-E-E 287 (567)
T ss_pred CChHHHCCCEEEEecCCccccccccccc---c--cccccccccccc-cc---------cc-----------hhhcc-c-c
Confidence 9999999999999999754433211000 0 000000000000 00 00 00000 0 0
Q ss_pred cccccccccccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCC
Q 007473 321 RVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSN 400 (602)
Q Consensus 321 ~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN 400 (602)
.+.....+++|++|++++..++++++.......+...+++||||+++.+++++++.+|++||++||+||||+|+|+||||
T Consensus 288 ~~~~~~~~~~ls~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~hNkr~l~RvYP~g~RvdSSN 367 (567)
T PLN02228 288 YKDEESEAVGYRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQWLETMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSN 367 (567)
T ss_pred ccccchhhhhhhhheeeeccccccCcchhhccCcccceeeccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCCCCC
Confidence 01112346789999999887776666655444455667999999999999999999999999999999999999999999
Q ss_pred CCCcccccccceEeeccccCCCcceeeecccccccccceeeecCCccCCCCCCCCcCCCCCCCCcceeEEEEEEeccCcc
Q 007473 401 YKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWY 480 (602)
Q Consensus 401 ~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L~ 480 (602)
|||+.||++|||||||||||+|++||||+|||++||+|||||||++||+.. ..|+|....|++.+|+|+||+|++|+
T Consensus 368 y~P~~~W~~G~QmVALN~QT~d~~M~lN~g~F~~NG~cGYVLKP~~Lr~~~---~~f~p~~~~p~~~~L~I~ViSGq~l~ 444 (567)
T PLN02228 368 YDPHVGWTHGAQMVAFNMQGHGKQLWIMQGMFRANGGCGYVKKPRILLDEH---TLFDPCKRLPIKTTLKVKIYTGEGWD 444 (567)
T ss_pred CCchhHhcCccEEeeecccCCChHHHhhcCchhhCCCCCceeCchhhcccc---cccCCccCCCcCceEEEEEEECCccC
Confidence 999999999999999999999999999999999999999999999999853 47999887777778999999999987
Q ss_pred cCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCee-ccEEEEEeecCCccEEEEEEEecCCCCCCCccEE
Q 007473 481 LDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVW-DDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQ 559 (602)
Q Consensus 481 ~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvW-NEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq 559 (602)
+++.....+..+++||||+|++.|.|.|..++||+++.|++||+| ||+|+|.+..||+|+|||.|+|+|..+.++|+||
T Consensus 445 lp~~~~~~~~~~~~DpyV~Vei~G~p~D~~~~rTk~~~n~~nP~W~~e~f~F~~~~pELA~lRf~V~D~d~~~~d~figq 524 (567)
T PLN02228 445 LDFHLTHFDQYSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLRVPELALLWFKVQDYDNDTQNDFAGQ 524 (567)
T ss_pred CCCCCCCCCCCCCCCcEEEEEEEecCCCCCcceeeccCCCCCceECCCeEEEEEEcCceeEEEEEEEeCCCCCCCCEEEE
Confidence 654444445567899999999999999999999999999999999 9999999999999999999999997778999999
Q ss_pred EEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEEEcc
Q 007473 560 TCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFYEAD 599 (602)
Q Consensus 560 ~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~e~~ 599 (602)
+++||++|++|||||||+|..|+++.+++|||||.+.+..
T Consensus 525 ~~lPv~~Lr~GYR~VpL~~~~G~~l~~atLfv~~~~~~~~ 564 (567)
T PLN02228 525 TCLPLPELKSGVRAVRLHDRAGKAYKNTRLLVSFALDPPY 564 (567)
T ss_pred EEcchhHhhCCeeEEEccCCCCCCCCCeEEEEEEEEcCcc
Confidence 9999999999999999999999999999999999998754
No 6
>PLN02223 phosphoinositide phospholipase C
Probab=100.00 E-value=4.4e-152 Score=1228.71 Aligned_cols=524 Identities=43% Similarity=0.757 Sum_probs=454.1
Q ss_pred cccccCCccCCCCchhHHHHHHHhhCCCCccCHHHHHHHH---HHHhCCCCCCHHHHHHHHHHHhhhcccccccc-CCCc
Q 007473 12 CFTRKHKVAEAGPPADVKEMFKKYAEGGTHMTAEQLWQFL---VEVQGHGGVSIEDAEQIVDQVLQRWHHIARFT-RRSL 87 (602)
Q Consensus 12 ~~~~~~~~~~~~~r~el~~if~~~~~~~~~l~~~~~~~Fl---~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~~l 87 (602)
-|.|+|+.+.+.+++||..+|.+|+++...|+.++|.+|| .++|+|..++.++|+.|++++.+...++..+. .+.|
T Consensus 2 ~~~~~~~~~~~~~p~~v~~~f~~~~~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l 81 (537)
T PLN02223 2 LLRKKFEMHPANQPDLILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRCL 81 (537)
T ss_pred ccccCCCCCCCCCcHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhcccc
Confidence 4789999999999999999999999888999999999999 99999999999999999999986554444443 3779
Q ss_pred CHHHHHHHhcCCCCCCCCCCCC-CcCCCCcccccccccCCcccccCCccCCC-CChHHHHHHHhcCCcEEEEEeecCCCC
Q 007473 88 TVEDFHHYLFSTDLNPPLGNQV-YQDMTAPLSHYFIYTGHNSYLIGNQFSSD-CSDVPITKALKRGVRVIELDLWPNSAK 165 (602)
Q Consensus 88 ~~~gF~~~L~S~~~n~~~~~~v-~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~-Ss~e~Y~~aL~~GCRcvElD~WdG~~~ 165 (602)
+++||++||+|++.|.|.+..| +|||++|||||||||||||||+||||.|+ ||+|+|++||++||||||||||||+.
T Consensus 82 ~~~~f~~~L~s~~~n~~~~~~v~~~DM~~PLshYfI~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcRcvElD~W~~~~- 160 (537)
T PLN02223 82 ELDHLNEFLFSTELNPPIGDQVRHHDMHAPLSHYFIHTSLKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPDGK- 160 (537)
T ss_pred CHHHHHHHhcCcccCCccccccCcccCCCchhhheeeccccccccCCcccCCcccHHHHHHHHHcCCcEEEEEecCCCC-
Confidence 9999999999988888887778 99999999999999999999999999999 99999999999999999999998754
Q ss_pred CCceEeecccccccchHHHHHHHHhhcccccC-CCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCCCCh
Q 007473 166 DDVLVLHGRTLTTPVELIKCLRAIKENAFSAS-PYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES-ECLKEFPSP 243 (602)
Q Consensus 166 ~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S-~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP 243 (602)
++|+|+|||||||+|+|+|||+||++|||++| +||||||||||||++||.+||++|++||||+||+++. +....||||
T Consensus 161 ~~~~v~hG~tlts~i~f~~vl~aI~~~AF~~s~~yPvIlslE~Hcs~~qQ~~~A~~l~~i~Gd~L~~~~~~~~~~~lPSP 240 (537)
T PLN02223 161 DGICVRPKWNFEKPLELQECLDAIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHSLEEFPSP 240 (537)
T ss_pred CCCeEeeCCceecceEHHHHHHHHHHHhhhcCCCCceEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCCccccccCCCh
Confidence 67899999999999999999999999999998 9999999999999999999999999999999999774 557899999
Q ss_pred hhccccEEEecCCCCccccccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhcccc
Q 007473 244 EELKYRIIISTKPPKERREKKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVT 323 (602)
Q Consensus 244 ~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (602)
++||||||||+|++++.++... ++ +. . . . +++ .+..
T Consensus 241 ~~Lk~kIlik~K~~~~~~~~~~--------------~~---~~-~-~----~--~~~-------------~~~~------ 276 (537)
T PLN02223 241 AELQNKILISRRPPKELLYAKA--------------DD---GG-V-G----V--RNE-------------LEIQ------ 276 (537)
T ss_pred HHhCCCEEEEcCCCcccccccc--------------cc---cc-c-c----c--ccc-------------cccc------
Confidence 9999999999998765433210 00 00 0 0 0 000 0000
Q ss_pred ccccccccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHh--cchhHHHhhccceeeEecCCcC-CCCCC
Q 007473 324 RASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVS--YGTDVVRFTQKNILRIYPKQTR-VNSSN 400 (602)
Q Consensus 324 ~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~--~~~~~~~~~~~~l~RvYP~g~R-idSSN 400 (602)
.....++|.+++.++..++++.+ .+++|.++.++.+. ++.++++||++||+||||+|+| +||||
T Consensus 277 ~~~~~~~y~~li~~~~~~~~~~~-------------~~~~~~~~~~~~~~s~~~~~~v~ft~~~l~RiYPkG~R~~dSSN 343 (537)
T PLN02223 277 EGPADKNYQSLVGFHAVEPRGML-------------QKALTGKADDIQQPGWYERDIISFTQKKFLRTRPKKKNLLINAP 343 (537)
T ss_pred ccccccceeeeeeeeccccccch-------------hhhhccchhhhhhccccchhhhhhcccceEEECCCCCccccCCC
Confidence 01224678899999887765432 33445555555432 4678999999999999999999 59999
Q ss_pred CCCcccccccceEeeccccCCCcceeeecccccccccceeeecCCccCCCCCCCCcCCCCCCCCcceeEEEEEEeccCcc
Q 007473 401 YKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKLPVKKTLKVKAYMGDGWY 480 (602)
Q Consensus 401 ~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L~ 480 (602)
|||+.+|++|||||||||||+|++||||+|||++||+|||||||++||+.++. ..|||....+.+.+|+|+||+|++|+
T Consensus 344 YnP~~~W~~GcQmVALN~QT~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~-~~FdP~~~~~~~~~L~V~Visgq~~~ 422 (537)
T PLN02223 344 YKPQRAWMHGAQLIALSRKDDKEKLWLMQGMFRANGGCGYVKKPDFLLNAGPS-GVFYPTENPVVVKILKVKIYMGDGWI 422 (537)
T ss_pred CCChhhcccceeEeeeccCCCChhHHhhcchhccCCCCCceECChhhccCCcc-cccCCCCCcccceEEEEEEEEccccc
Confidence 99999999999999999999999999999999999999999999999987654 37999765556788999999999997
Q ss_pred cCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEE
Q 007473 481 LDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQT 560 (602)
Q Consensus 481 ~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~ 560 (602)
.+++++. +..+++||||+|+|.|.|.|+.+++|++..|++||+|||+|+|.+.+||+|+|||.|+|+|....++|+||+
T Consensus 423 ~~~~k~~-~~~s~~DpyV~VeI~Gvp~D~~~~kT~v~nNg~nPvWne~F~F~i~~PELAlLrf~V~D~D~~~~ddfiGQ~ 501 (537)
T PLN02223 423 VDFKKRI-GRLSKPDLYVRISIAGVPHDEKIMKTTVKNNEWKPTWGEEFTFPLTYPDLALISFEVYDYEVSTADAFCGQT 501 (537)
T ss_pred CCccccc-CCCCCCCeEEEEEEeeccCCcceeEEEeCCCCcCceecceeEEEEEccCceEEEEEEEecCCCCCCcEEEEE
Confidence 5443332 445789999999999999999988998777779999999999999999999999999999988889999999
Q ss_pred EEeCCCccCccEEEEccCCCCCccCCeEEEEEEEE
Q 007473 561 CLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 561 ~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
++||.+|++|||||||+|..|+++..++|||||+|
T Consensus 502 ~LPv~~Lr~GyR~VpL~~~~g~~l~~~~Ll~~f~~ 536 (537)
T PLN02223 502 CLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 536 (537)
T ss_pred ecchHHhcCCceeEeccCCCcCCCCCceEEEEEEe
Confidence 99999999999999999999999999999999997
No 7
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=5.9e-142 Score=1158.79 Aligned_cols=555 Identities=30% Similarity=0.464 Sum_probs=441.4
Q ss_pred CCCCchhHHHHHHHhhCCC-CccCHHHHHHHHHHHhCCCCC--------CHHHHHHHHHHHhhhccccccccCCCcCHHH
Q 007473 21 EAGPPADVKEMFKKYAEGG-THMTAEQLWQFLVEVQGHGGV--------SIEDAEQIVDQVLQRWHHIARFTRRSLTVED 91 (602)
Q Consensus 21 ~~~~r~el~~if~~~~~~~-~~l~~~~~~~Fl~~~Q~~~~~--------~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~g 91 (602)
.++.|+||+.||.+++++. ++||.++|.+||++.|+++.+ +..++..||++|++.... ..++.|+.+|
T Consensus 216 klcpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~---a~~gqms~dg 292 (1189)
T KOG1265|consen 216 KLCPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDN---AEKGQMSTDG 292 (1189)
T ss_pred hcCCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhh---hhccccchhh
Confidence 4688999999999999886 999999999999999999864 468899999999965321 2468899999
Q ss_pred HHHHhcCCCCCCCC---CCCCCcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCC-CCC
Q 007473 92 FHHYLFSTDLNPPL---GNQVYQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSA-KDD 167 (602)
Q Consensus 92 F~~~L~S~~~n~~~---~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~-~~~ 167 (602)
|.+||++ +.|.++ ....++||+||||||||||||||||||+||.|.||+|+|++||+.||||||||||||.+ .+|
T Consensus 293 f~ryl~g-dEn~i~a~~~l~l~~dM~qPl~hYFINSSHNTYlTg~Ql~g~sSvEmYRQvLLsGcRCVELDcWdgk~~d~E 371 (1189)
T KOG1265|consen 293 FVRYLMG-DENAIVALDKLDLVTDMDQPLSHYFINSSHNTYLTGGQLGGKSSVEMYRQVLLSGCRCVELDCWDGKGEDEE 371 (1189)
T ss_pred hHHHhhC-CccccccHHHHHhhhhhccchhhhhccccccceeecccccCcchHHHHHHHHHhcCceEEeeeecCCCCCCC
Confidence 9999997 568776 45578999999999999999999999999999999999999999999999999999943 357
Q ss_pred ceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC-----CCCCCCC
Q 007473 168 VLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE-----CLKEFPS 242 (602)
Q Consensus 168 piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-----~~~~lPS 242 (602)
|||+||.|+|+.|.|+|||+||+++||+|||||||||+|||||+.||.+||+||++||||+|++.|.+ +...|||
T Consensus 372 PvITHG~tm~teI~fKdVleAIaEtAFkTSpyPVILSfENH~s~kQQaKMa~ycr~IFGDmLL~~PLe~~PL~pgv~lPs 451 (1189)
T KOG1265|consen 372 PVITHGFTMTTEIFFKDVLEAIAETAFKTSPYPVILSFENHCSPKQQAKMAEYCRDIFGDMLLTEPLEDYPLEPGVPLPS 451 (1189)
T ss_pred ceeecccchhhhhhHHHHHHHHHHhhccCCCCceEEeecccCCHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999996633 3478999
Q ss_pred hhhccccEEEecCCCCcc-cccc--ccCc--cccccccCCCCc--cc----ccC-----CC----CCCCCCCcCCCCCCc
Q 007473 243 PEELKYRIIISTKPPKER-REKK--GINN--RKDISAKGKIST--ED----VLG-----KE----PPDLTANQADDERSD 302 (602)
Q Consensus 243 P~~Lk~KIlik~K~~~~~-~~~~--~~~~--~~~~~~~~~~~~--~~----~~~-----~~----~~~~~~~~~~~~~~~ 302 (602)
|++||+|||||+||..-. .+.. .... .++.+.....+. ++ ..+ .+ -+.+..+....++..
T Consensus 452 P~~Lr~KILIKnKKk~~~~~~~~~~~~~~~~~e~~~~s~~~~~~~~d~~~~~~~~~~~ge~~~~~~~~~g~~~~~~~~~~ 531 (1189)
T KOG1265|consen 452 PEDLRRKILIKNKKKHFEKHESDQFRSRKKLGEEAEGSSSPSAEAEDDSEEQVGLSLSGEERAHPEVELGGERPADDEAH 531 (1189)
T ss_pred HHHHhhhhhccccccccccccccccccccccCcccccCCCCcccccCccccccCcccccccccCcccccccccCCccccc
Confidence 999999999999975311 1110 0000 000000000000 00 000 00 000000000000000
Q ss_pred -c--ccCcCCCCCCc-c---hhhhccccccccccccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcc
Q 007473 303 -Y--DTSEHNQCDED-N---TEACDRVTRASGTLAYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYG 375 (602)
Q Consensus 303 -~--~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~ 375 (602)
+ +.+....+.++ + .++........++++.|+||.|.....+.+|.-+-+ ...+++|+||+|+++..++++++
T Consensus 532 ~E~~ee~~~~~l~e~~~~~~~~e~~ag~e~~a~~e~S~lVNyiqpvkf~sfe~a~k-rN~~f~msSf~E~~~~~~Lk~~~ 610 (1189)
T KOG1265|consen 532 PELDEESEAKQLSEDPEKTTADEGTAGAETNAHEEMSSLVNYIQPVKFSSFEIAEK-RNRHFEMSSFDESTGLGYLKKSP 610 (1189)
T ss_pred hhhhhhhhhhcccccccccCCCccccchhhhhHHHHHhhhhhcccccccchhhhhh-hcceeeeeechhHHHHHHHHhCc
Confidence 0 00000000000 0 000000112245678899998865444555544433 34688999999999999999999
Q ss_pred hhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceeeecccccccccceeeecCCccCCCCCCCC
Q 007473 376 TDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLLKEGPDDQ 455 (602)
Q Consensus 376 ~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~ 455 (602)
.+||+||++||+||||+|+|||||||+||.|||+|||||||||||+|.+||||.|||..||+|||+|||+|||++. +
T Consensus 611 iefV~yNK~QlSRIYPKgtRvdSSNymPqifWnaGcQmVsLNfQT~dlaMQlN~g~FEyNG~sGYllKPdfmRrpD---r 687 (1189)
T KOG1265|consen 611 IEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLAMQLNMGMFEYNGGSGYLLKPDFMRRPD---R 687 (1189)
T ss_pred hHHhhhhhHhhhccccCcccccccccchHHHHhccceEEEeeccCccHHHHhhhhheeecCCccceeChHHhhCCC---c
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999984 5
Q ss_pred cCCCCCCCCc----ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCccc--ccccCCCCC-CCCeecc-
Q 007473 456 VFDPKEKLPV----KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKM--KSTKKKVDN-WTPVWDD- 527 (602)
Q Consensus 456 ~f~p~~~~p~----~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k--~kTkvi~nn-~nPvWNE- 527 (602)
.|||+...++ ..++.|+|||||-|.- . .+..||+|.+.|.|.|..+ +||+++.+| +||+|+|
T Consensus 688 ~fdPFse~~VdgvIA~t~sV~VISgqFLSd------r----kvgtyVEVdmfgLP~Dt~Rk~~rtrt~~~n~~npvy~ee 757 (1189)
T KOG1265|consen 688 QFDPFSESPVDGVIAATLSVTVISGQFLSD------R----KVGTYVEVDMFGLPTDTIRKEFRTRTVQGNSFNPVYEEE 757 (1189)
T ss_pred CcCCcccCcccceEEeeEEEEEEeeeeccc------c----ccCceEEEEecCCCchhhhhhhhhccccCCCCCcccccC
Confidence 8999987554 5689999999998731 1 1346999999999999764 589998866 8999985
Q ss_pred EEEEE-eecCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 528 EFTFP-LTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 528 tf~F~-v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
.|.|. |..|++|+|||.|+++. ..||||..+||+.|+.|||||.|++..|+++..+.|||.|.+..
T Consensus 758 pfvF~KVvLpeLA~lRiavyeEg----gK~ig~RIlpvd~l~~GYrhv~LRse~Nqpl~lp~Lfv~i~~kd 824 (1189)
T KOG1265|consen 758 PFVFRKVVLPELASLRIAVYEEG----GKFIGQRILPVDGLNAGYRHVCLRSESNQPLTLPALFVYIVLKD 824 (1189)
T ss_pred CcccceecccchhheeeeeeccC----CceeeeeccchhcccCcceeEEecCCCCCccccceeEEEEEeec
Confidence 59995 88999999999999965 67999999999999999999999999999999999999998764
No 8
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=2.2e-131 Score=1066.28 Aligned_cols=538 Identities=29% Similarity=0.431 Sum_probs=415.2
Q ss_pred CCccCHHHHHHHHHHHhCCCCCCH-HHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCCCCCCCC---CCCCCcC-C
Q 007473 39 GTHMTAEQLWQFLVEVQGHGGVSI-EDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPL---GNQVYQD-M 113 (602)
Q Consensus 39 ~~~l~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~~~n~~~---~~~v~qd-M 113 (602)
...++..+|.+||..+|++.++++ ..+++++.+|-++ .......+.|++++|..||+|. .|+.| ...|..| |
T Consensus 235 ~~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D--~~re~~EPyl~v~EFv~fLFSr-eNslWd~k~d~V~~d~M 311 (1267)
T KOG1264|consen 235 ASVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDD--TMRETAEPYLFVDEFVTFLFSR-ENSLWDSKYDAVDMDDM 311 (1267)
T ss_pred ceEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhh--hhhhccCcceeHHHHHHHHhhc-ccccccccccccchhhh
Confidence 367899999999999999987664 3456677776543 1122346799999999999985 68877 3557655 9
Q ss_pred CCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHHhhcc
Q 007473 114 TAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIKENA 193 (602)
Q Consensus 114 ~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~A 193 (602)
+.|||||||+||||||||||||.++||+|+|+|||++||||||||||||++ +.||||||||+||||.|+||+++||+||
T Consensus 312 n~PLShYWIsSSHNTYLTGDQlrSESSleaYar~LrMGCRCIELDCWdGpd-~~pvIyHG~T~TtKIkf~DVlhtIkdhA 390 (1267)
T KOG1264|consen 312 NNPLSHYWISSSHNTYLTGDQLRSESSLEAYARCLRMGCRCIELDCWDGPD-GKPVIYHGHTRTTKIKFDDVLHTIKDHA 390 (1267)
T ss_pred cCcchhheeeccCcceecccccccccCHHHHHHHHHhCCeEEEeecccCCC-CCceEEeccceeeeeehHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999998 5799999999999999999999999999
Q ss_pred cccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhhccccEEEecCCCCcccc--ccc--cCc
Q 007473 194 FSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE-CLKEFPSPEELKYRIIISTKPPKERRE--KKG--INN 268 (602)
Q Consensus 194 F~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~--~~~--~~~ 268 (602)
|++|+||||||||.|||++||+.||+.+|+||||+|++.|.+ +...||||.+||+|||||+||.+...+ ... .++
T Consensus 391 FvtSeyPVILSIEd~CSv~qQR~mAq~~keV~GD~LLTkP~er~~~qLPSP~qLrrKIiiKHKKLp~~edva~~m~~~ed 470 (1267)
T KOG1264|consen 391 FVTSEYPVILSIEDHCSVEQQRNMAQAFKEVFGDLLLTKPTERSADQLPSPSQLRRKIIIKHKKLPPREDVAVNMEDKED 470 (1267)
T ss_pred eeccCCcEEEEhhhcCChHHHHHHHHHHHHHHhhHHhcCcccchhhcCCCHHHHhhhHhhhcccCCchhhhchhhhcccc
Confidence 999999999999999999999999999999999999998854 478999999999999999999753211 000 000
Q ss_pred c------------------------------------ccccccCCCCcccccCCCCCC-------------CCCCc----
Q 007473 269 R------------------------------------KDISAKGKISTEDVLGKEPPD-------------LTANQ---- 295 (602)
Q Consensus 269 ~------------------------------------~~~~~~~~~~~~~~~~~~~~~-------------~~~~~---- 295 (602)
+ +..+.....+++ .....+|+ +.+..
T Consensus 471 d~~nsvk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e~~~~~n~ndee-~~kd~s~s~ElH~~E~WFHgkle~R~eAek 549 (1267)
T KOG1264|consen 471 DHKNSVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDEIEQTENPNDEE-VPKDISPSTELHFGEKWFHGKLEGRTEAEK 549 (1267)
T ss_pred cchhhhhcceEEEecCCCCceeeeEEEEecceeEeehhccCcCCCCccc-ccccCCcchhhccchhhhhcccccchHHHH
Confidence 0 000000000111 00000000 00000
Q ss_pred ------C------------CCCC--Cc-----------------------------------------------------
Q 007473 296 ------A------------DDER--SD----------------------------------------------------- 302 (602)
Q Consensus 296 ------~------------~~~~--~~----------------------------------------------------- 302 (602)
. +++. .|
T Consensus 550 ll~eycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfdslY~LI~~Y~~~~Lr~a 629 (1267)
T KOG1264|consen 550 LLQEYCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFDSLYALIQHYRETHLRCA 629 (1267)
T ss_pred HHHHHHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHHHHHHHHHHHHhcccccc
Confidence 0 0000 00
Q ss_pred -------------------------------cccC---------------------------------------------
Q 007473 303 -------------------------------YDTS--------------------------------------------- 306 (602)
Q Consensus 303 -------------------------------~~~~--------------------------------------------- 306 (602)
++++
T Consensus 630 eF~m~LtePvPqp~~He~k~W~~as~treqAE~mL~rvp~DGaFLiR~~~~~nsy~iSfr~~gkikHcRi~rdGr~fvl~ 709 (1267)
T KOG1264|consen 630 EFEMRLTEPVPQPNPHESKPWYHASLTREQAEDMLMRVPRDGAFLIRKREGSNSYAISFRARGKIKHCRINRDGRHFVLG 709 (1267)
T ss_pred ceEEEecCCCCCCCcccCCccccccccHHHHHHHHhhCccCcceEEEeccCCceEEEEEEEcCcEeEEEEccCceEEEec
Confidence 0000
Q ss_pred -----------------------------------------------cCCC-------CCCcch---------------h
Q 007473 307 -----------------------------------------------EHNQ-------CDEDNT---------------E 317 (602)
Q Consensus 307 -----------------------------------------------~~~~-------~~~~~~---------------~ 317 (602)
+.+. .+..+. +
T Consensus 710 t~~FesLv~lv~yY~k~~lyR~mkLr~PVnee~l~~~~~e~d~~a~~d~~r~pg~yme~n~~~~~vt~kAL~~Yka~r~D 789 (1267)
T KOG1264|consen 710 TSAFESLVELVSYYEKHPLYRKMKLRYPVNEELLERYNTERDINALYDVSRMPGDYMEINPSMPQVTVKALYDYKAKRSD 789 (1267)
T ss_pred cHHHHHHHHHHHHHhcChhhhcccccCcCCHHHHHHhhhhcccccccccccCCCCccccCccccchhhhhhhccccCCcc
Confidence 0000 000000 0
Q ss_pred h------------------------------------------------------------------------------h
Q 007473 318 A------------------------------------------------------------------------------C 319 (602)
Q Consensus 318 ~------------------------------------------------------------------------------~ 319 (602)
+ +
T Consensus 790 ELSFpk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~~~~~~~e~~~lne~plGtl~rgi~d~~~~nvv~~~q~ 869 (1267)
T KOG1264|consen 790 ELSFPKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEISTADFEELEKQILNENPLGTLCRGILDLNTYNVVKAPQG 869 (1267)
T ss_pred cccccccceeEeeeccCCceeecccccceeeeccHHHhhhhccccccchhhhhhcccccchhhhccccccccceeecccc
Confidence 0 0
Q ss_pred c--------------------------------------------cc--------cccccccccccceEEecccccC--c
Q 007473 320 D--------------------------------------------RV--------TRASGTLAYKRLIAIHNGKLKG--C 345 (602)
Q Consensus 320 ~--------------------------------------------~~--------~~~~~~~~~~~li~~~~~~~~~--~ 345 (602)
. .+ ....++.|+|+||+|+...|+. .
T Consensus 870 ~n~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~a~tk~s~~k~kEk~krIA~ElSdLVVYcr~vp~~~~~ 949 (1267)
T KOG1264|consen 870 KNQKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWKADTKESEMKYKEKNKRIAIELSDLVVYCRPVPKTKDN 949 (1267)
T ss_pred cCCcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhceEEEEecCCCcccc
Confidence 0 00 0012334455555555444421 1
Q ss_pred hhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcce
Q 007473 346 LKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSL 425 (602)
Q Consensus 346 ~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m 425 (602)
+. ++....|+||.|+||.|++...+.+|+.||+++|+||||+|.|+|||||||+++|+||||||||||||.|++|
T Consensus 950 ~~-----n~~f~em~SF~EtKadk~v~q~~~~lL~ynr~qlSRVYPkGqRldSsNy~P~pmWn~GsqmVALN~QTgDKpM 1024 (1267)
T KOG1264|consen 950 LE-----NPDFREMSSFVETKADKIVRQKPVDLLKYNRKQLSRVYPKGQRLDSSNYDPFPMWNCGSQMVALNFQTGDKPM 1024 (1267)
T ss_pred cc-----cHHHHHHhcccchhHHHHHHhccccccccccccceeecCCCcccccCCCCCcccccccceeEEeeccCCCchh
Confidence 11 1122347899999999999888889999999999999999999999999999999999999999999999999
Q ss_pred eeecccccccccceeeecCCccCCCCCCCCcCCCCCCC---C-cceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEE
Q 007473 426 WLMHGMFRANAGCGYVKKPNFLLKEGPDDQVFDPKEKL---P-VKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVG 501 (602)
Q Consensus 426 ~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~---p-~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~ 501 (602)
|||+|+|+.||+|||||||++||.. .|||.... . .+.+|.|+||.|+.|+.. ..+..-|||+|+
T Consensus 1025 QmNqa~F~~ngrcGYvLqPs~Mrte-----~fdP~n~e~~~~l~p~~lsv~vigaRHL~k~-------gr~i~cPfVevE 1092 (1267)
T KOG1264|consen 1025 QMNQALFSLNGRCGYVLQPSSMRTE-----KFDPMNPESQRGLLPMTLSVKVLGARHLPKL-------GRSIACPFVEVE 1092 (1267)
T ss_pred hhhHHHhhcCCceeeEecchhcccc-----cCCCCChHHhccccceEEEEEEeeccccccC-------CCCccCCcEEEE
Confidence 9999999999999999999999974 68887531 1 246799999999988632 113345899999
Q ss_pred EecCCCCcccccccCCC-CCCCCeec-cEEEEEeecCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCccEEEEccCC
Q 007473 502 IAGVPADKKMKSTKKKV-DNWTPVWD-DEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDR 579 (602)
Q Consensus 502 i~G~p~d~~k~kTkvi~-nn~nPvWN-Etf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~d~ 579 (602)
|.|.+.|..+++|++|. |++||+|| |+|+|.|.+|++|+|||.|+|.|+++...||||+++||.+|+.|||.|||+|.
T Consensus 1093 iiGa~~Dt~~~~t~~V~dNGlnPiWn~e~ftFeI~nPe~A~lRF~V~eeDmfs~~~FiaqA~yPv~~ik~GfRsVpLkN~ 1172 (1267)
T KOG1264|consen 1093 IIGAEYDTNKFKTTVVNDNGLNPIWNPEKFTFEIYNPEFAFLRFVVYEEDMFSDPNFLAQATYPVKAIKSGFRSVPLKNG 1172 (1267)
T ss_pred EeccccCCCceEEEEeccCCCCCCCCCcceEEEeeCCceEEEEEEEecccccCCcceeeeeecchhhhhccceeeecccC
Confidence 99999999888877665 55899999 99999999999999999999999999888999999999999999999999999
Q ss_pred CCCccCCeEEEEEEEEEEc
Q 007473 580 KGEELGSARLLMRFEFYEA 598 (602)
Q Consensus 580 ~g~~l~~asL~v~i~~~e~ 598 (602)
+.+.++.++|||.|++..+
T Consensus 1173 ySEdlELaSLLv~i~m~~~ 1191 (1267)
T KOG1264|consen 1173 YSEDLELASLLVFIEMRPV 1191 (1267)
T ss_pred chhhhhhhhheeeeEeccc
Confidence 9999999999999998653
No 9
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=100.00 E-value=2.7e-110 Score=832.05 Aligned_cols=257 Identities=33% Similarity=0.524 Sum_probs=236.5
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +|||||||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08629 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKILFCDVLRAI 79 (258)
T ss_pred CCCCCCchhhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999976 679999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES-ECLKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
++|||++|+||||||||||||++||.+||+||+++|||+|++++. +....||||++||||||||+|+++
T Consensus 80 ~~~AF~~S~yPvIlsLE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~~k---------- 149 (258)
T cd08629 80 RDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLK---------- 149 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCHHHHCCCEEEEecccc----------
Confidence 999999999999999999999999999999999999999999773 446799999999999999999752
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
+++++++|+.|..++.++++..
T Consensus 150 ----------------------------------------------------------i~~eLs~l~~y~~~~~f~~~~~ 171 (258)
T cd08629 150 ----------------------------------------------------------LVPELSDMIIYCKSVHFGGFSS 171 (258)
T ss_pred ----------------------------------------------------------ccHHHHHHHHHhcCCCCCCccc
Confidence 1244666666666666666766
Q ss_pred HhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceeee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLM 428 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN 428 (602)
....++..++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||
T Consensus 172 ~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN 251 (258)
T cd08629 172 PGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVY 251 (258)
T ss_pred hhhcCCCcceecccCHHHHHHHHHHhHHHHHHhchhccceeCCCCCCCCCCCCCchHHhcCCceEEEecccCCChhHHhh
Confidence 55434456789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 007473 429 HGMFRAN 435 (602)
Q Consensus 429 ~~~F~~N 435 (602)
+|||++|
T Consensus 252 ~G~F~~N 258 (258)
T cd08629 252 LGCFQDN 258 (258)
T ss_pred hchhcCC
Confidence 9999987
No 10
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=2.1e-109 Score=822.61 Aligned_cols=252 Identities=36% Similarity=0.510 Sum_probs=223.0
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++||||||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (254)
T cd08633 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPD-GEPIVHHGYTLTSKILFKDVIETI 79 (254)
T ss_pred CCCcCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999987 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCC--CCCCCCCChhhccccEEEecCCCCccccccccC
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES--ECLKEFPSPEELKYRIIISTKPPKERREKKGIN 267 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~--~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 267 (602)
++|||++|+||||||||||||++||.+||+||+++|||+|+.++. +....||||++||||||||+|++...+
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPsP~~Lk~KIlik~Kk~~~~L------ 153 (254)
T cd08633 80 NKYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKLDLSSVISNDCTRLPSPEILKGKILVKGKKLSRAL------ 153 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhcCCCCCcCccCCCCCHHHHccCeEEeeccCchhh------
Confidence 999999999999999999999999999999999999999998652 345789999999999999999853211
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchh
Q 007473 268 NRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLK 347 (602)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~ 347 (602)
++|+.+..+..+.++.
T Consensus 154 ----------------------------------------------------------------s~l~~y~~~~~~~~~~ 169 (254)
T cd08633 154 ----------------------------------------------------------------SDLVKYTKSVRVHDIE 169 (254)
T ss_pred ----------------------------------------------------------------hHHhhhcccCCcCccc
Confidence 1111111111111121
Q ss_pred HHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 348 EELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 348 ~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
... ...++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++|||
T Consensus 170 ~~~---~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~l 246 (254)
T cd08633 170 TEA---TSSWQVSSFSETKAHQILQQKPAQYLRFNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQSEGRMLQL 246 (254)
T ss_pred ccc---ccceeeecccHHHHHHHHHHCHHHHHHhhhhcccccCCCCCCCCCCCCCchHHhcCCCeEEEecccCCCchhHh
Confidence 110 12468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc
Q 007473 428 MHGMFRAN 435 (602)
Q Consensus 428 N~~~F~~N 435 (602)
|+|||+.|
T Consensus 247 N~g~F~~N 254 (254)
T cd08633 247 NRAKFSAN 254 (254)
T ss_pred hcccccCC
Confidence 99999987
No 11
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=6e-109 Score=824.87 Aligned_cols=254 Identities=36% Similarity=0.547 Sum_probs=224.2
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEeecccccccchHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNS-AKDDVLVLHGRTLTTPVELIKCLRA 188 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~dvi~a 188 (602)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ ++++||||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~ePvV~HG~tlts~i~f~dv~~~ 80 (261)
T cd08624 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTEILFKDAIEA 80 (261)
T ss_pred CCCCCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999995 2468999999999999999999999
Q ss_pred HhhcccccCCCceEEEecCCC-CHHHHHHHHHHHHHHhhcccCCCCCCC-----CCCCCChhhccccEEEecCCCCcccc
Q 007473 189 IKENAFSASPYPVILTFEDHL-NPHLQAKVAQMITQTFGAMLYSPESEC-----LKEFPSPEELKYRIIISTKPPKERRE 262 (602)
Q Consensus 189 I~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~ 262 (602)
|++|||++|+||||||||||| +++||++||+||+++|||+|++++.+. ...||||++||||||||+|+.++
T Consensus 81 I~~~AF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~Kilik~K~~~e--- 157 (261)
T cd08624 81 IAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGDMLLTEPLEKYPLKPGVPLPSPEDLRGKILIKNKKYEE--- 157 (261)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCcCCcCCCHHHHhccEEEeeccccc---
Confidence 999999999999999999999 799999999999999999999977432 47899999999999999997421
Q ss_pred ccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccc
Q 007473 263 KKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKL 342 (602)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 342 (602)
+++|+.|..+..
T Consensus 158 --------------------------------------------------------------------ls~lv~y~~~~k 169 (261)
T cd08624 158 --------------------------------------------------------------------MSSLVNYIQPTK 169 (261)
T ss_pred --------------------------------------------------------------------chhhhcccCCcC
Confidence 122222222222
Q ss_pred cCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCC
Q 007473 343 KGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYG 422 (602)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D 422 (602)
+.+|....... ..++++||+|+++.+++++.+.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|
T Consensus 170 f~~f~~~~~~~-~~~~~~S~sE~k~~~l~~~~~~~fv~~N~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~D 248 (261)
T cd08624 170 FVSFEFSAQKN-RSYVISSFTELKAYDLLSKASVQFVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQTMD 248 (261)
T ss_pred CCCcccccccC-CcceeecccHHHHHHHHHHhHHHHHHhchhheeeeCCCCCcccCcCCCchHHhcCCCeEEEecccCCC
Confidence 22332222111 23468999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccccccc
Q 007473 423 KSLWLMHGMFRAN 435 (602)
Q Consensus 423 ~~m~lN~~~F~~N 435 (602)
++||||+|||++|
T Consensus 249 ~~M~LN~G~F~~n 261 (261)
T cd08624 249 LPMQQNMALFEFN 261 (261)
T ss_pred hhhhhhcccccCC
Confidence 9999999999987
No 12
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=100.00 E-value=5.3e-109 Score=825.25 Aligned_cols=256 Identities=35% Similarity=0.561 Sum_probs=236.5
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08630 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPG-GEPVIYHGHTLTSKILFRDVIQAV 79 (258)
T ss_pred CCccccchhhheeecccCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 679999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCC--CCCCCChhhccccEEEecCCCCccccccccC
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESEC--LKEFPSPEELKYRIIISTKPPKERREKKGIN 267 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 267 (602)
++|||++|+||||||||||||.+||.+||+||+++|||+|++++.+. ...||||++||||||||+|+++
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~~Gd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~kk~~--------- 150 (258)
T cd08630 80 RQHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDMLVTQPLDSLNPEELPSPEELKGRVLVKGKKLQ--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcCCCCCHHHHccCEEeeccCcc---------
Confidence 99999999999999999999999999999999999999999977543 5789999999999999998741
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchh
Q 007473 268 NRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLK 347 (602)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~ 347 (602)
+++++++|+.|+.++.+++|.
T Consensus 151 -----------------------------------------------------------i~~els~L~~y~~~~~~~~~~ 171 (258)
T cd08630 151 -----------------------------------------------------------ISPELSALAVYCQATRLRTLE 171 (258)
T ss_pred -----------------------------------------------------------chHHHHhhHhhcccccCCCcc
Confidence 135678888887777777776
Q ss_pred HHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 348 EELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 348 ~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
..... ....+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++|||
T Consensus 172 ~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~~~l~RiYPkgtRidSSNynP~~~W~~G~QmVALN~QT~d~~M~L 250 (258)
T cd08630 172 PAPVQ-PQPCQVSSLSERKAKKLIREAGNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQTPGYEMDL 250 (258)
T ss_pred hhhhc-CCCccccccCHHHHHHHHHHhHHHHHHhhhcccceeCCCCCcCCCCCCCcHHHhcCCCeEEEecccCCChhhhh
Confidence 55321 23458999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc
Q 007473 428 MHGMFRAN 435 (602)
Q Consensus 428 N~~~F~~N 435 (602)
|+|||++|
T Consensus 251 N~G~F~~N 258 (258)
T cd08630 251 NAGRFLVN 258 (258)
T ss_pred hcccccCC
Confidence 99999987
No 13
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=6.1e-109 Score=817.61 Aligned_cols=251 Identities=31% Similarity=0.511 Sum_probs=221.7
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++ ++|+||||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~Tlts~i~f~dv~~aI 79 (253)
T cd08632 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKITFRDVIETI 79 (253)
T ss_pred CCcccchhhhhhhccCCCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999977 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCC--CCCCCCCCChhhccccEEEecCCCCccccccccC
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPE--SECLKEFPSPEELKYRIIISTKPPKERREKKGIN 267 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~--~~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 267 (602)
++|||++|+||||||||||||++||.+||+||+++|||+|+.++ .+....||||++||||||||+|++...+
T Consensus 80 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~el------ 153 (253)
T cd08632 80 NKYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKLDLSSVLTGDPKQLPSPQLLKGKILVKGKKLCRDL------ 153 (253)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcccCCCHHHhcCcEEEeccCCcHHH------
Confidence 99999999999999999999999999999999999999998765 2346789999999999999999852111
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchh
Q 007473 268 NRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLK 347 (602)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~ 347 (602)
++|+.+..+..+.++.
T Consensus 154 ----------------------------------------------------------------s~l~~~~~~~~~~~~~ 169 (253)
T cd08632 154 ----------------------------------------------------------------SDLVVYTNSVAAQDIV 169 (253)
T ss_pred ----------------------------------------------------------------HhhhhhccCcccccch
Confidence 1111111111111111
Q ss_pred HHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 348 EELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 348 ~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
+. ....+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++|||
T Consensus 170 ~~----~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~L 245 (253)
T cd08632 170 DD----GSTGNVLSFSETRAHQLVQQKAEQFMTYNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQSEGRMMQL 245 (253)
T ss_pred hc----CCcccccccCHHHHHHHHHHhHHHHHHHhhhccceeCCCCCcCcCCCCCcHHHhcCCCeEEEecccCCChhHHh
Confidence 10 11347899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc
Q 007473 428 MHGMFRAN 435 (602)
Q Consensus 428 N~~~F~~N 435 (602)
|+|||+.|
T Consensus 246 N~g~F~~n 253 (253)
T cd08632 246 NRAKFMVN 253 (253)
T ss_pred hcccccCC
Confidence 99999987
No 14
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=100.00 E-value=6.7e-109 Score=822.86 Aligned_cols=255 Identities=35% Similarity=0.550 Sum_probs=226.6
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||||||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~ep~v~HG~tlt~~i~f~~v~~~I 79 (257)
T cd08595 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGAD-NEPVVYHGYTLTSKILFKEVITTV 79 (257)
T ss_pred CCCCCCchhhheeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEecCCCcccccCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 679999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCC--CCCCCChhhccccEEEecCCCCccccccccC
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESEC--LKEFPSPEELKYRIIISTKPPKERREKKGIN 267 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 267 (602)
++|||++|+||||||||||||++||.+||+||+++|||+|++++.+. ...||||++||||||||+|+.-
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~lgd~L~~~~~~~~~~~~lpsP~~Lk~KIlik~K~ki--------- 150 (257)
T cd08595 80 EKYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKLLRAPIDDPATGELPSPEALKFKILVKNKKKI--------- 150 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCCCcCCcCcCCCHHHHcCCEEEEecccc---------
Confidence 99999999999999999999999999999999999999999977543 4799999999999999998620
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchh
Q 007473 268 NRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLK 347 (602)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~ 347 (602)
++++++|+.|..+..+.++.
T Consensus 151 ------------------------------------------------------------~~els~L~~y~~~~~~~~~~ 170 (257)
T cd08595 151 ------------------------------------------------------------AKALSDLVIYTKSEKFCSFT 170 (257)
T ss_pred ------------------------------------------------------------ChhHHHHhhhcCCcCCCCcc
Confidence 11234444443332223332
Q ss_pred HHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 348 EELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 348 ~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
..... ...++++||+|+++.++++.++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++|||
T Consensus 171 ~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~r~l~RvYP~GtRidSSNynP~~~W~~G~QmVALN~Qt~d~~M~L 249 (257)
T cd08595 171 HSRDN-QHSYENNSIGENKARKLLKSSGADFVGHTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQTLGAPMDL 249 (257)
T ss_pred ccccc-cccceecccCHHHHHHHHHHhHHHHHHHhhcCCceeCcCCCCCCCCCCCcHHHHcCCCeEEEecccCCChhhhh
Confidence 21111 12357899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc
Q 007473 428 MHGMFRAN 435 (602)
Q Consensus 428 N~~~F~~N 435 (602)
|+|||++|
T Consensus 250 N~G~F~~N 257 (257)
T cd08595 250 QNGKFLDN 257 (257)
T ss_pred hcCcccCC
Confidence 99999987
No 15
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=100.00 E-value=8.6e-109 Score=822.51 Aligned_cols=256 Identities=34% Similarity=0.536 Sum_probs=229.1
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++||||||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08631 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGPN-GEPIVYHGHTFTSKILFKDVVAAV 79 (258)
T ss_pred CCcCCcchhhheeecCCCccccCCcccCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCcccCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCC--CCCCCChhhccccEEEecCCCCccccccccC
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESEC--LKEFPSPEELKYRIIISTKPPKERREKKGIN 267 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 267 (602)
++|||++|+|||||||||||+++||.+||+||+++|||+|++++.+. ...||||++||||||||+|+++
T Consensus 80 k~~AF~~s~yPvIlslE~Hc~~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~Kk~~--------- 150 (258)
T cd08631 80 AQYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKLLSTTLDGVLPTQLPSPEELRGKILLKGKKIR--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHhcceEeeecccc---------
Confidence 99999999999999999999999999999999999999999977543 4799999999999999999751
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchh
Q 007473 268 NRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLK 347 (602)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~ 347 (602)
+.+++++|+.|..+..+.++.
T Consensus 151 -----------------------------------------------------------~~~eLs~L~~y~~~~~f~~~~ 171 (258)
T cd08631 151 -----------------------------------------------------------LSPELSDCVIYCKSVSFRSFT 171 (258)
T ss_pred -----------------------------------------------------------ccHHHHHhHhhhcccccCCcc
Confidence 123345555554444333343
Q ss_pred HHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 348 EELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 348 ~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
..-.. ...++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++|||
T Consensus 172 ~~~~~-~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~L 250 (258)
T cd08631 172 HSREH-YHFYEISSFTETKARKLIREAGNEFVQHNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQTAGLEMDL 250 (258)
T ss_pred ccccc-CccceecccCHHHHHHHHHhchHHHHHHHHhcCceeCcCCCCCCCCCCCcHHHHhCCCeEeeecccCCChhHHh
Confidence 22111 12357899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc
Q 007473 428 MHGMFRAN 435 (602)
Q Consensus 428 N~~~F~~N 435 (602)
|+|||++|
T Consensus 251 N~G~F~~N 258 (258)
T cd08631 251 NDGLFRQN 258 (258)
T ss_pred hcchhcCC
Confidence 99999987
No 16
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core
Probab=100.00 E-value=2.1e-108 Score=818.09 Aligned_cols=249 Identities=34% Similarity=0.521 Sum_probs=223.8
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|||||||||||+|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdG~~-~eP~V~HG~tlts~i~f~dv~~~I 79 (254)
T cd08596 1 EEDLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCWDGDD-GMPIIYHGHTLTTKIPFKDVVEAI 79 (254)
T ss_pred CCccccchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999977 679999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCC---C--CCCCCCChhhccccEEEecCCCCcccccc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES---E--CLKEFPSPEELKYRIIISTKPPKERREKK 264 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~---~--~~~~lPSP~~Lk~KIlik~K~~~~~~~~~ 264 (602)
++|||++|+||||||||||||.+||.+||+||+++|||+|++++. + ....||||++||||||||+|+.+
T Consensus 80 ~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~l~~~~~~~~~~lPsP~~Lk~KIlik~K~~~------ 153 (254)
T cd08596 80 NRSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEKLVTKFLFESDFSDDPSLPSPLQLKNKILLKNKKAP------ 153 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhccCCcccccccccCCCCCHHHHhhcceecccCcH------
Confidence 999999999999999999999999999999999999999998752 1 24689999999999999998731
Q ss_pred ccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccC
Q 007473 265 GINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKG 344 (602)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~ 344 (602)
++++|+.|..+..+.
T Consensus 154 -----------------------------------------------------------------els~l~~y~~~~k~~ 168 (254)
T cd08596 154 -----------------------------------------------------------------ELSDLVIYCQAVKFP 168 (254)
T ss_pred -----------------------------------------------------------------HHHHHHHHhcCccCC
Confidence 122333332222223
Q ss_pred chhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcc
Q 007473 345 CLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKS 424 (602)
Q Consensus 345 ~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~ 424 (602)
++. .+..++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++
T Consensus 169 ~~~-----~~~~~~~~S~sE~~~~~~~~~~~~~lv~~n~~~l~RiYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~ 243 (254)
T cd08596 169 GLS-----TPKCYHISSLNENAAKRLCRRYPQKLVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQTDDLP 243 (254)
T ss_pred CCC-----ccccceecccCHHHHHHHHHHCHHHHHHhhhhcceeeccCCCcCCCCCCCcHHHHhCCCeEEeecccCCChH
Confidence 332 123568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccccc
Q 007473 425 LWLMHGMFRAN 435 (602)
Q Consensus 425 m~lN~~~F~~N 435 (602)
||||+|||++|
T Consensus 244 m~LN~G~F~~N 254 (254)
T cd08596 244 MHLNAAMFEAN 254 (254)
T ss_pred HHhhhchhcCC
Confidence 99999999987
No 17
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=6.5e-108 Score=815.75 Aligned_cols=251 Identities=35% Similarity=0.522 Sum_probs=220.6
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEeecccccccchHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNS-AKDDVLVLHGRTLTTPVELIKCLRA 188 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~dvi~a 188 (602)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ ++++||||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~eP~V~HG~tlts~i~f~dv~~a 80 (257)
T cd08626 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQA 80 (257)
T ss_pred CCcccchhhhheeecCcCccccCCcccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCCccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999996 2468999999999999999999999
Q ss_pred HhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCC-----CCCCCChhhccccEEEecCCCCccccc
Q 007473 189 IKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESEC-----LKEFPSPEELKYRIIISTKPPKERREK 263 (602)
Q Consensus 189 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~~ 263 (602)
|++|||++|+||||||||||||++||.+||+||+++|||+|++++.+. ...||||++||||||||+|+..+..
T Consensus 81 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~KIlik~K~Ls~L~-- 158 (257)
T cd08626 81 IKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGDLLLTKPLESHPLEPGVPLPSPNKLKRKILIKNKRLSSLV-- 158 (257)
T ss_pred HHHHhcccCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHhhcCCCccccccccCCCCCCHHHHhcCeeecccchhhhh--
Confidence 999999999999999999999999999999999999999999976432 4689999999999999999731100
Q ss_pred cccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEeccccc
Q 007473 264 KGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLK 343 (602)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~ 343 (602)
+|..+..+
T Consensus 159 ------------------------------------------------------------------------~y~~~~~~ 166 (257)
T cd08626 159 ------------------------------------------------------------------------NYAQPVKF 166 (257)
T ss_pred ------------------------------------------------------------------------cccccCCC
Confidence 00000000
Q ss_pred CchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCc
Q 007473 344 GCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGK 423 (602)
Q Consensus 344 ~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~ 423 (602)
.++....+. ...++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|+
T Consensus 167 ~~~~~~~~~-~~~~~~~S~sE~k~~~~~~~~~~~~v~~n~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~ 245 (257)
T cd08626 167 QGFDVAEER-NIHFNMSSFNESVGLGYLKTSAIEFVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDL 245 (257)
T ss_pred CCcCchhhc-CCCccccccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCCCcCCCCCcHHHhcCCCeEEEecccCCCh
Confidence 111111111 1135789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccccccc
Q 007473 424 SLWLMHGMFRAN 435 (602)
Q Consensus 424 ~m~lN~~~F~~N 435 (602)
+||||+|||+.|
T Consensus 246 ~m~LN~G~F~~n 257 (257)
T cd08626 246 GMQLNQGKFEYN 257 (257)
T ss_pred hHHhhhccccCC
Confidence 999999999987
No 18
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=1e-107 Score=814.72 Aligned_cols=251 Identities=34% Similarity=0.554 Sum_probs=221.5
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCC-CCCceEeecccccccchHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSA-KDDVLVLHGRTLTTPVELIKCLRA 188 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~-~~~piv~HG~Tlts~i~f~dvi~a 188 (602)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +++||||||||||++|+|+|||+|
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~ePiV~HG~tlts~i~f~dv~~~ 80 (258)
T cd08623 1 NEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEA 80 (258)
T ss_pred CCCcCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999974 368999999999999999999999
Q ss_pred HhhcccccCCCceEEEecCCC-CHHHHHHHHHHHHHHhhcccCCCCCC-----CCCCCCChhhccccEEEecCCCCcccc
Q 007473 189 IKENAFSASPYPVILTFEDHL-NPHLQAKVAQMITQTFGAMLYSPESE-----CLKEFPSPEELKYRIIISTKPPKERRE 262 (602)
Q Consensus 189 I~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~ 262 (602)
|++|||++|+||||||||||| +++||.+||+||+++|||+|++++.+ ....||||++||||||||+|+..+
T Consensus 81 I~~~AF~~S~yPvIlSlE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lpSP~~Lk~KIlik~KkLs~--- 157 (258)
T cd08623 81 IAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKMSN--- 157 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhccCCccccccccCCcCCCHHHHhhhhheeccchhc---
Confidence 999999999999999999999 59999999999999999999997743 346899999999999999997411
Q ss_pred ccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccc
Q 007473 263 KKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKL 342 (602)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 342 (602)
|++|..+..
T Consensus 158 -----------------------------------------------------------------------Lv~y~~~v~ 166 (258)
T cd08623 158 -----------------------------------------------------------------------LVNYIQPVK 166 (258)
T ss_pred -----------------------------------------------------------------------ccccccCcc
Confidence 111111111
Q ss_pred cCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCC
Q 007473 343 KGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYG 422 (602)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D 422 (602)
+.+|...... ...++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||++||++|||||||||||+|
T Consensus 167 f~~f~~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~QT~d 245 (258)
T cd08623 167 FESFEASKKR-NKSFEMSSFVETKGLEQLTKSPVEFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVD 245 (258)
T ss_pred cCCccccccc-CCCccccCccHHHHHHHHHhCHHHHHHHhhhhceeeccCCCcccCCCCCChhhhcCCceEEEeecCCCC
Confidence 2222211111 123578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccccccc
Q 007473 423 KSLWLMHGMFRAN 435 (602)
Q Consensus 423 ~~m~lN~~~F~~N 435 (602)
++||||+|||+.|
T Consensus 246 ~~M~LN~G~F~~~ 258 (258)
T cd08623 246 LSMQINMGMYEYN 258 (258)
T ss_pred cchhhhcccccCC
Confidence 9999999999986
No 19
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=100.00 E-value=2.8e-107 Score=811.25 Aligned_cols=251 Identities=37% Similarity=0.542 Sum_probs=221.5
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCC-CCceEeecccccccchHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAK-DDVLVLHGRTLTTPVELIKCLRA 188 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~-~~piv~HG~Tlts~i~f~dvi~a 188 (602)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+++ ++|+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tlts~i~f~~v~~a 80 (257)
T cd08591 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTMCTEILFKDVIEA 80 (257)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCCccCeEHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999853 68999999999999999999999
Q ss_pred HhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCC-----CCCCCChhhccccEEEecCCCCccccc
Q 007473 189 IKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESEC-----LKEFPSPEELKYRIIISTKPPKERREK 263 (602)
Q Consensus 189 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~~ 263 (602)
|++|||++|+||||||||||||.+||.+||+||+++|||+|++++.+. ...||||++||||||||+|+..+..
T Consensus 81 Ik~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~~~~~~~~~~~~~lPSP~~Lk~KIlik~K~ls~L~-- 158 (257)
T cd08591 81 IAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGDLLLTEPLEKYPLEPGVPLPSPNDLKRKILIKNKKLSSLV-- 158 (257)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCCCCHHHHhcceeeecccchhhh--
Confidence 999999999999999999999999999999999999999999987432 3689999999999999999732100
Q ss_pred cccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEeccccc
Q 007473 264 KGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLK 343 (602)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~ 343 (602)
+|..+..+
T Consensus 159 ------------------------------------------------------------------------~y~~~~~f 166 (257)
T cd08591 159 ------------------------------------------------------------------------NYIQPVKF 166 (257)
T ss_pred ------------------------------------------------------------------------ccccCCCC
Confidence 00000000
Q ss_pred CchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCc
Q 007473 344 GCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGK 423 (602)
Q Consensus 344 ~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~ 423 (602)
.++...... ...++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|+
T Consensus 167 ~~~~~~~~~-~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~ 245 (257)
T cd08591 167 QGFEVAEKR-NKHYEMSSFNESKGLGYLKKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQTPDL 245 (257)
T ss_pred CCccchhhc-CCcceecccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCcCcCCCCCcHHHhcCCCeEEEecCcCCCh
Confidence 111111111 1235789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccccccc
Q 007473 424 SLWLMHGMFRAN 435 (602)
Q Consensus 424 ~m~lN~~~F~~N 435 (602)
+||||+|||++|
T Consensus 246 ~m~lN~g~F~~N 257 (257)
T cd08591 246 PMQLNQGKFEYN 257 (257)
T ss_pred hHHhhcccccCC
Confidence 999999999987
No 20
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=3.5e-107 Score=815.55 Aligned_cols=250 Identities=36% Similarity=0.540 Sum_probs=221.8
Q ss_pred cCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEeecccccccchHHHHHHHH
Q 007473 111 QDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNS-AKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 111 qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
|||++|||||||||||||||+|+||.|+||+|||++||++||||||||||||+ .+++||||||||||++|+|+|||+||
T Consensus 2 ~Dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~eP~v~Hg~t~t~~i~f~dv~~~I 81 (258)
T cd08625 2 DDMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFITHGFTMTTEIPFKDVIEAI 81 (258)
T ss_pred CccCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCCCEEeeCCccccCcCHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999995 24689999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCC-CHHHHHHHHHHHHHHhhcccCCCCCC-----CCCCCCChhhccccEEEecCCCCccccc
Q 007473 190 KENAFSASPYPVILTFEDHL-NPHLQAKVAQMITQTFGAMLYSPESE-----CLKEFPSPEELKYRIIISTKPPKERREK 263 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~~ 263 (602)
++|||++|+||||||||||| |.+||++||++|++||||+|++++.+ ....||||++||||||||+|+..+
T Consensus 82 ~~~aF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~ilGd~L~~~~~d~~~~~~~~~lpsP~~Lk~KILIK~KklSd---- 157 (258)
T cd08625 82 AESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIDPLDKYPLVPGVQLPSPQELMGKILVKNKKMST---- 157 (258)
T ss_pred HHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHHHHhcCCcccccccccccCCCCHHHHhhceeeeeeeccc----
Confidence 99999999999999999999 79999999999999999999997744 246899999999999999997421
Q ss_pred cccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEeccccc
Q 007473 264 KGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLK 343 (602)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~ 343 (602)
|++|+.+.++
T Consensus 158 ----------------------------------------------------------------------Lvvy~~~vkf 167 (258)
T cd08625 158 ----------------------------------------------------------------------LVNYIEPVKF 167 (258)
T ss_pred ----------------------------------------------------------------------ccceeccccc
Confidence 1111111112
Q ss_pred CchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCc
Q 007473 344 GCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGK 423 (602)
Q Consensus 344 ~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~ 423 (602)
.++.+.... ...++++||+|+|+.+++++++.+|++||++||+||||+|+|||||||||++||++|||||||||||+|+
T Consensus 168 ~~f~~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNydP~~~W~~G~QmVALN~QT~D~ 246 (258)
T cd08625 168 KSFEAAAKR-NKFFEMSSFVETKAMEQLTKSPMEFVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDL 246 (258)
T ss_pred CCchhhhcc-CCcceecCccHHHHHHHHHhCHHHHHHhhhcceeeeccCCCcCcCCCCCChhHhcCcceEEEeecCCCCc
Confidence 222222111 1245789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccccccc
Q 007473 424 SLWLMHGMFRAN 435 (602)
Q Consensus 424 ~m~lN~~~F~~N 435 (602)
+||||+|||+.|
T Consensus 247 ~M~LN~G~F~~n 258 (258)
T cd08625 247 AMQLNMGVFEYN 258 (258)
T ss_pred chhhhcccccCC
Confidence 999999999987
No 21
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=100.00 E-value=2.5e-107 Score=815.09 Aligned_cols=256 Identities=38% Similarity=0.587 Sum_probs=231.4
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
+||||+|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++||||||||||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~t~~i~f~~v~~~I 79 (257)
T cd08593 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPD-GEPIIYHGHTLTSKILFKDVIQAI 79 (257)
T ss_pred CCcCCcchhhheeecccCccccCCcccCCccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCccccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES-ECLKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
++|||++|+||||||||||||++||.+||+||+++|||+|+.++. +....||||++||||||||+|+++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~~p~~~~~~~lpsP~~Lk~Kilik~k~~~---------- 149 (257)
T cd08593 80 REYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGDKLLTQPLDGVLTALPSPEELKGKILVKGKKLK---------- 149 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHCCCEEEEecccc----------
Confidence 999999999999999999999999999999999999999999774 335799999999999999999741
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
+.+++++|+.+..+..++++.+
T Consensus 150 ----------------------------------------------------------i~~els~L~~~~~~~k~~~~~~ 171 (257)
T cd08593 150 ----------------------------------------------------------LAKELSDLVIYCKSVHFKSFEH 171 (257)
T ss_pred ----------------------------------------------------------ccHHHHhhhhhcccccCCChhh
Confidence 1234556655544333455554
Q ss_pred HhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceeee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLM 428 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN 428 (602)
... .....+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||
T Consensus 172 ~~~-~~~~~~~~SlsE~k~~~~~~~~~~~lv~~n~~~l~RvYP~g~RidSSNynP~~~W~~G~QmVALN~Qt~D~~m~LN 250 (257)
T cd08593 172 SKE-NYHFYEMSSFSESKALKLAQESGNEFVRHNKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQTPGEEMDLN 250 (257)
T ss_pred hcc-cCCCceeecCCHHHHHHHHHHhHHHHHHhhhhccceeCCCCCcCCCCCCCcHHHHhCCCeEeeecccCCChHHHhh
Confidence 432 2345689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 007473 429 HGMFRAN 435 (602)
Q Consensus 429 ~~~F~~N 435 (602)
+|||+.|
T Consensus 251 ~G~F~~N 257 (257)
T cd08593 251 DGLFRQN 257 (257)
T ss_pred hchhcCC
Confidence 9999987
No 22
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=100.00 E-value=2.2e-106 Score=790.31 Aligned_cols=225 Identities=38% Similarity=0.598 Sum_probs=215.6
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
||||++|||||||||||||||+||||.|+||+|||++||++||||||||||||++ ++|||||||||||+|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~Y~~aL~~GcRcvElD~wdg~~-~ePvV~HG~tlts~i~f~dv~~aI 79 (227)
T cd08594 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKILFRDVIETI 79 (227)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCC--CCCCCCCCChhhccccEEEecCCCCccccccccC
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPE--SECLKEFPSPEELKYRIIISTKPPKERREKKGIN 267 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~--~~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 267 (602)
++|||++|+||||||||||||++||.+||+||+++|||+|++++ .+....||||++||||||||+|+
T Consensus 80 ~~~AF~~s~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~K~----------- 148 (227)
T cd08594 80 NKYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDKLDLSSVISGDSKQLPSPQSLKGKILIKGKK----------- 148 (227)
T ss_pred HHhhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHHhccCCCCccccCCCCCHHHHccCEeccCCc-----------
Confidence 99999999999999999999999999999999999999999864 33468999999999999999751
Q ss_pred ccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchh
Q 007473 268 NRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLK 347 (602)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~ 347 (602)
T Consensus 149 -------------------------------------------------------------------------------- 148 (227)
T cd08594 149 -------------------------------------------------------------------------------- 148 (227)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 348 EELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 348 ~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++|||
T Consensus 149 ---------~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~L 219 (227)
T cd08594 149 ---------WQVSSFSETRAHQIVQQKAAQFLRFNQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQTEGRMLQL 219 (227)
T ss_pred ---------ceeccccHHHHHHHHHHHHHHHHHhcccccceeCCCCCcCcCCCCCchHHhcCCceEEEecccCCChhhHh
Confidence 25789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc
Q 007473 428 MHGMFRAN 435 (602)
Q Consensus 428 N~~~F~~N 435 (602)
|+|||+.|
T Consensus 220 N~g~F~~N 227 (227)
T cd08594 220 NRAKFRAN 227 (227)
T ss_pred hcccccCC
Confidence 99999987
No 23
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=1.4e-106 Score=806.07 Aligned_cols=253 Identities=35% Similarity=0.561 Sum_probs=225.8
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
.|||++||+||||+|||||||+|+||.|+||+|+|++||++||||||||||||++ ++||||||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~t~ts~i~f~dv~~~I 79 (254)
T cd08628 1 PQDMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGPD-GKPIIYHGWTRTTKIKFDDVVQAI 79 (254)
T ss_pred CCcccchHHhhheecCcCCcccCCeeecCCCHHHHHHHHHcCCcEEEEEeecCCC-CCeEEeeCCCccCCcCHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999977 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES-ECLKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
++|||++|+|||||||||||+.+||.+||+||+++|||+|++++. +....||||++||||||||+|+..
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lpsp~~Lk~Kilik~k~~~---------- 149 (254)
T cd08628 80 KDHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLLMKPLEASADQLPSPTQLKEKIIIKHKKLI---------- 149 (254)
T ss_pred HHHhccCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHHhcCCCCccccccCCCHHHHcCCeEeeccCcC----------
Confidence 999999999999999999999999999999999999999998664 446799999999999999998741
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
++|+++|+.|+.+..+. +..
T Consensus 150 -----------------------------------------------------------~~eLs~l~~y~~~~~~~-~~~ 169 (254)
T cd08628 150 -----------------------------------------------------------AIELSDLVVYCKPTSKT-KDN 169 (254)
T ss_pred -----------------------------------------------------------CHHHHhhHhhhcccccc-cCC
Confidence 23345555554332211 000
Q ss_pred HhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceeee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLM 428 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN 428 (602)
+ .++...+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||
T Consensus 170 -~-~~~~~~~~~S~sE~k~~~~~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~d~~M~LN 247 (254)
T cd08628 170 -L-ENPDFKEIRSFVETKAPSIIRQKPVQLLKYNRKGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKYMQLN 247 (254)
T ss_pred -c-ccccccccccccHHHHHHHHHhHHHHHHHHhHhhhhhhCCCCCcCCCCCCCchHHhcCCCeEEEeeccCCChhhhhh
Confidence 1 11223478999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 007473 429 HGMFRAN 435 (602)
Q Consensus 429 ~~~F~~N 435 (602)
+|||++|
T Consensus 248 ~G~F~~n 254 (254)
T cd08628 248 HALFSLN 254 (254)
T ss_pred hhhccCC
Confidence 9999987
No 24
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein. This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment
Probab=100.00 E-value=1.7e-104 Score=795.82 Aligned_cols=259 Identities=36% Similarity=0.530 Sum_probs=232.5
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
+|||++||+||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR~vElD~w~g~~-gepvV~Hg~tlts~i~f~dv~~~I 79 (260)
T cd08597 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGPN-GEPVIYHGHTLTSKISFRSVIEAI 79 (260)
T ss_pred CCcccchHHhhhhccccCccccCCeecCccCHHHHHHHHHhCCCEEEEEeEcCCC-CCEEEEeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999977 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPES-ECLKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
++|||++|+|||||||||||+.+||.+||+||+++|||+|+.++. +....||||++||||||||+|+++.
T Consensus 80 ~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~Kilik~k~~~~--------- 150 (260)
T cd08597 80 NEYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKLYTEPPNEGESYLPSPHDLKGKIIIKGKKLKR--------- 150 (260)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCHHHHCCCEEEEecCCCc---------
Confidence 999999999999999999999999999999999999999999874 4567999999999999999997521
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
.++++++++|+.|..+..+.++..
T Consensus 151 --------------------------------------------------------~~~~~els~l~~~~~~~~~~~~~~ 174 (260)
T cd08597 151 --------------------------------------------------------RKLCKELSDLVSLCKSVRFQDFPT 174 (260)
T ss_pred --------------------------------------------------------ccccHHHHhhhhhhcCcccCCccc
Confidence 012345666666654444444433
Q ss_pred HhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceeee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLM 428 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN 428 (602)
... ....++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||
T Consensus 175 ~~~-~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~M~lN 253 (260)
T cd08597 175 SAQ-NQKYWEVCSFSENLARRLANEFPEDFVNYNKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQTPGLMMDLN 253 (260)
T ss_pred ccc-ccCcccccccCHHHHHHHHHHCHHHHHHHhhhcCceeCcCCCCCCCCCCCchHHhcCCCeEeeecccCCChhhhhh
Confidence 211 2234678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 007473 429 HGMFRAN 435 (602)
Q Consensus 429 ~~~F~~N 435 (602)
+|||++|
T Consensus 254 ~g~F~~N 260 (260)
T cd08597 254 TGKFLEN 260 (260)
T ss_pred cccccCC
Confidence 9999987
No 25
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins. This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki
Probab=100.00 E-value=1.7e-103 Score=772.78 Aligned_cols=225 Identities=43% Similarity=0.681 Sum_probs=216.4
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
+|||++|||||||+|||||||+||||.|+||+|+|++||++||||||||||||++ ++||||||+|+|++|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~Ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~ts~i~f~dv~~~I 79 (226)
T cd08558 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGPD-GEPVVYHGHTLTSKILFKDVIEAI 79 (226)
T ss_pred CCcCCccHHHhhhcccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCeEEeeCCCCccceEHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCC-CCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESEC-LKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
|+|||++|+||||||||||||.+||.+||++|+++|||+|++++.+. ...||||++||||||||+|+
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~------------ 147 (226)
T cd08558 80 KEYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKLLTPPLDENPVQLPSPEQLKGKILIKGKK------------ 147 (226)
T ss_pred HHHhcccCCCCeEEEEecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCCCCChHHhCCCEEEEccC------------
Confidence 99999999999999999999999999999999999999999988654 47999999999999999751
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
T Consensus 148 -------------------------------------------------------------------------------- 147 (226)
T cd08558 148 -------------------------------------------------------------------------------- 147 (226)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceeee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLM 428 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN 428 (602)
++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||++||++|||||||||||+|++||||
T Consensus 148 --------~~~~S~sE~~~~~~~~~~~~~l~~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN 219 (226)
T cd08558 148 --------YHMSSFSETKALKLLKESPEEFVKYNKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQTPDLPMQLN 219 (226)
T ss_pred --------ceEeecCHHHHHHHHHHChHHHHHhcccceeEECcCCCcCCCCCCCcHHHHhCCCeEeeecccCCChhhhhh
Confidence 257899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 007473 429 HGMFRAN 435 (602)
Q Consensus 429 ~~~F~~N 435 (602)
+|||+.|
T Consensus 220 ~g~F~~n 226 (226)
T cd08558 220 QGKFEQN 226 (226)
T ss_pred cccccCC
Confidence 9999976
No 26
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=2.7e-103 Score=768.20 Aligned_cols=226 Identities=39% Similarity=0.643 Sum_probs=211.3
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
.|||++|||||||||||||||+||||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~~DM~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~d-gePvV~Hg~tlts~i~f~dv~~~I 79 (229)
T cd08627 1 PEEMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPVIYHGHTLTTKIKFSDVLHTI 79 (229)
T ss_pred CccccchhhhheeecCcCccccCCccCCcccHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCceEHHHHHHHH
Confidence 3799999999999999999999999999999999999999999999999999987 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE-CLKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
++|||++|+||||||||||||++||.+||+||+++|||+|++++.+ ....||||++||||||||+|+..
T Consensus 80 ~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lPSP~~Lk~KIlik~K~~~---------- 149 (229)
T cd08627 80 KEHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLLTKPVDINADGLPSPNQLKRKILIKHKKLY---------- 149 (229)
T ss_pred HHhhccCCCCCEEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCcccCCCcCCChHHhCcCEEEeccccc----------
Confidence 9999999999999999999999999999999999999999997744 46789999999999999998620
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
.
T Consensus 150 ------------------------------------------------------------~------------------- 150 (229)
T cd08627 150 ------------------------------------------------------------R------------------- 150 (229)
T ss_pred ------------------------------------------------------------c-------------------
Confidence 0
Q ss_pred HhhhcccceEEeeccHHHHHHHHHh-cchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAAVS-YGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~~~-~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
+++||+|+++.+++++ .+.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++|||
T Consensus 151 ---------~~~S~~E~ka~~~~~~~~~~~fv~~n~~~l~RiYP~G~RidSSNy~P~~~W~~G~QmVALN~Qt~d~~M~L 221 (229)
T cd08627 151 ---------DMSSFPETKAEKYVNRSKGKKFLQYNRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQM 221 (229)
T ss_pred ---------ccCCcChHHHHHHHHhhhHHHHHHhcccceeEeCCCCCcCcCCCCCchhHhccCcEEEEeeccCCCcchhh
Confidence 1357889999998754 568999999999999999999999999999999999999999999999999999
Q ss_pred ecccccc
Q 007473 428 MHGMFRA 434 (602)
Q Consensus 428 N~~~F~~ 434 (602)
|+|||+.
T Consensus 222 N~G~F~~ 228 (229)
T cd08627 222 NQALFML 228 (229)
T ss_pred hcCcccC
Confidence 9999984
No 27
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=100.00 E-value=4e-103 Score=772.47 Aligned_cols=229 Identities=37% Similarity=0.640 Sum_probs=216.0
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
.|||++|||||||+|||||||+||||.|+||+|+|++||++||||||||||||++ ++||||||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~ep~V~HG~t~ts~i~f~dv~~~I 79 (231)
T cd08598 1 EEDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDD-GEPVVTHGYTLTSSVPFRDVCRAI 79 (231)
T ss_pred CCccccchHhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCcCceEHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999975 679999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE-CLKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
++|||++|+||||||||||||.+||.+||+||+++|||+|++++.+ ....||||++||||||||+|+. .
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~KIlik~K~~-----~----- 149 (231)
T cd08598 80 KKYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLLVTEPLDGLEDELPSPEELRGKILIKVKKE-----S----- 149 (231)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCCHHHHCCCEEEEeccc-----C-----
Confidence 9999999999999999999999999999999999999999998753 3579999999999999999850 0
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
+
T Consensus 150 ------------------------------------------------------------~------------------- 150 (231)
T cd08598 150 ------------------------------------------------------------K------------------- 150 (231)
T ss_pred ------------------------------------------------------------C-------------------
Confidence 0
Q ss_pred HhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceeee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWLM 428 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~lN 428 (602)
...+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||
T Consensus 151 ------~~~~~~S~sE~~~~~l~~~~~~~lv~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN 224 (231)
T cd08598 151 ------TPNHIFSLSERSLLKLLKDKRAALDKHNRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQTYDLGMQLN 224 (231)
T ss_pred ------CCceeeccCHHHHHHHHHHHHHHHHHHhhhceeeeCCCCCcCCCCCCCcHHHHhCCCeEEEecccCCChhhhhh
Confidence 01257899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 007473 429 HGMFRA 434 (602)
Q Consensus 429 ~~~F~~ 434 (602)
+|||+.
T Consensus 225 ~G~F~~ 230 (231)
T cd08598 225 EAMFAG 230 (231)
T ss_pred cccccC
Confidence 999985
No 28
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl
Probab=100.00 E-value=5.5e-102 Score=762.40 Aligned_cols=227 Identities=40% Similarity=0.646 Sum_probs=214.9
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
+|||++||+||||||||||||+|+||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~ess~eay~~AL~~GcR~vElDvwdg~d-gePvV~HG~tlts~i~f~dv~~~I 79 (229)
T cd08592 1 PQDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPIIYHGHTLTSKIKFMDVLKTI 79 (229)
T ss_pred CCcccchhHhheeeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCCcCHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999977 579999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE-CLKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
++|||++|+||||||||||||.+||.+||+||+++|||+|++++.+ ....||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~p~~~~~~~lpsP~~Lk~KILik~K~~----------- 148 (229)
T cd08592 80 KEHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLLTQPVDRNADQLPSPNQLKRKIIIKHKKL----------- 148 (229)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhHHhcCCCCccCCCcCCCHHHHCCCEEEEecCC-----------
Confidence 9999999999999999999999999999999999999999997643 4679999999999999998741
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
T Consensus 149 -------------------------------------------------------------------------------- 148 (229)
T cd08592 149 -------------------------------------------------------------------------------- 148 (229)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhcccceEEeeccHHHHHHHH-HhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAA-VSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~-~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
..+++||+|+++.+++ ++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++|||
T Consensus 149 -------~~~~~S~~E~~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~l 221 (229)
T cd08592 149 -------FYEMSSFPETKAEKYLNRQKGKIFLKYNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQTPDKPMQL 221 (229)
T ss_pred -------cccccCCcHHHHHHHHHHhhHHHHHHhhhhcceeeCCCCCcCcCCCCCchHHhcCCceEEEeeccCCChhHHh
Confidence 0135789999999998 47889999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc
Q 007473 428 MHGMFRAN 435 (602)
Q Consensus 428 N~~~F~~N 435 (602)
|+|||+.|
T Consensus 222 N~g~F~~N 229 (229)
T cd08592 222 NQALFMLN 229 (229)
T ss_pred hcccccCC
Confidence 99999987
No 29
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi
Probab=100.00 E-value=4.8e-101 Score=757.38 Aligned_cols=226 Identities=62% Similarity=1.021 Sum_probs=215.5
Q ss_pred CcCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAI 189 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 189 (602)
||||++|||||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|+||||+|+||+|+|+|||++|
T Consensus 1 ~qDm~~PLs~YfI~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~ep~V~HG~t~ts~i~f~dvl~~I 79 (228)
T cd08599 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGR-GDICVLHGGTLTKPVKFEDCIKAI 79 (228)
T ss_pred CCcCCcchhhhEEeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCeEEEeCCCCcCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 679999999999999999999999
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCC-CCCCCChhhccccEEEecCCCCccccccccCc
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESEC-LKEFPSPEELKYRIIISTKPPKERREKKGINN 268 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 268 (602)
++|||++|+|||||||||||+.+||.+||++|+++|||+||+|+.+. ...||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvILslE~hcs~~qQ~~~a~~l~~~lGd~L~~~~~~~~~~~lPsp~~Lk~Kilik~k~~----------- 148 (228)
T cd08599 80 KENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKLFYPDSEDLPEEFPSPEELKGKILISDKPP----------- 148 (228)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhhhhccCCCcccccCCCCHHHhCCCEEEEecCC-----------
Confidence 99999999999999999999999999999999999999999987554 479999999999999998631
Q ss_pred cccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccccCchhH
Q 007473 269 RKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKLKGCLKE 348 (602)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~ 348 (602)
T Consensus 149 -------------------------------------------------------------------------------- 148 (228)
T cd08599 149 -------------------------------------------------------------------------------- 148 (228)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhcccceEEeeccHHHHHHHHH-hcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccceEeeccccCCCcceee
Q 007473 349 ELNLQLEKVRRISLSEQKFEKAAV-SYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGAQMVALNMQGYGKSLWL 427 (602)
Q Consensus 349 ~~~~~~~~~~~~S~sE~~~~kl~~-~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmVALN~QT~D~~m~l 427 (602)
++++||+|+++.++.+ .++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++|||
T Consensus 149 --------~~~~S~sE~~~~~l~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~L 220 (228)
T cd08599 149 --------VIRNSLSETQLKKVIEGEHPTDLIEFTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMVALNMQGYDRPLWL 220 (228)
T ss_pred --------ccccCccHHHHHHHhhhhcHHHHHHHhhccceeeccCCcccCCCCCCChHHhcCcceEeeeecCCCChhhhh
Confidence 2467999999999996 8899999999999999999999999999999999999999999999999999999
Q ss_pred eccccccc
Q 007473 428 MHGMFRAN 435 (602)
Q Consensus 428 N~~~F~~N 435 (602)
|+|||+.|
T Consensus 221 N~G~F~~N 228 (228)
T cd08599 221 NRGKFRAN 228 (228)
T ss_pred hcccccCC
Confidence 99999987
No 30
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a
Probab=100.00 E-value=1.5e-63 Score=512.31 Aligned_cols=251 Identities=23% Similarity=0.365 Sum_probs=212.1
Q ss_pred CcCCCCcccccccccCCcccccCCccC-----CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHH
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFS-----SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIK 184 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~-----g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~d 184 (602)
++||++||+||||++||||||+|+|+. |+++.++|+++|++||||+|||||+|++ ++|+|+||+|+| +++|+|
T Consensus 1 ~~d~~~pLs~~~IpgSHnS~~~~~~~~~~~~~~~tq~~~~~~qL~~G~R~lDir~~~~~~-~~~~v~HG~~~~-~~~f~d 78 (274)
T cd00137 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDGKP-EEPIIYHGPTFL-DIFLKE 78 (274)
T ss_pred CCCCCcCHHHeEEcCchHhhhcCCCCccccccCcCcHHHHHHHHHcCCcEEEEEeecCCC-CCeEEEECCccc-CcCHHH
Confidence 689999999999999999999999998 9999999999999999999999999876 579999999999 999999
Q ss_pred HHHHHhhcccccCCCceEEEecCCCCH--HHHHHHHHHHHHHhhcccCCCCCCCCCCCCChhhccccEEEecCCCCcccc
Q 007473 185 CLRAIKENAFSASPYPVILTFEDHLNP--HLQAKVAQMITQTFGAMLYSPESECLKEFPSPEELKYRIIISTKPPKERRE 262 (602)
Q Consensus 185 vi~aI~~~AF~~S~yPvILSlE~Hcs~--~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~~~~ 262 (602)
||++|+++||..++||||||||+||+. +||.+||++|+++||++|++|+......+|||++||||||||+|+......
T Consensus 79 vl~~i~~fl~~~p~e~vIlsl~~~~~~~~~~q~~~~~~~~~~~g~~l~~~~~~~~~~~Psl~~lrgKIll~~r~~~~~~~ 158 (274)
T cd00137 79 VIEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCRTIFGDMLLTPPLKPTVPLPSLEDLRGKILLLNKKNGFSGP 158 (274)
T ss_pred HHHHHHHHHHHCCCCeEEEEEEecCCCcHHHHHHHHHHHHHhhhhhhccCccccCCCCCCHHHHhhheeEEeeccCCCCC
Confidence 999999999999999999999999998 999999999999999999998765567899999999999999987521000
Q ss_pred ccccCccccccccCCCCcccccCCCCCCCCCCcCCCCCCccccCcCCCCCCcchhhhccccccccccccccceEEecccc
Q 007473 263 KKGINNRKDISAKGKISTEDVLGKEPPDLTANQADDERSDYDTSEHNQCDEDNTEACDRVTRASGTLAYKRLIAIHNGKL 342 (602)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 342 (602)
. ..+...|.. . ..+. .
T Consensus 159 ~--------------~~~~~~~~~---------------------~--------------------~~~~--------~- 174 (274)
T cd00137 159 T--------------GSSNDTGFV---------------------S--------------------FEFS--------T- 174 (274)
T ss_pred c--------------ccccccCcC---------------------C--------------------cccc--------c-
Confidence 0 000000000 0 0000 0
Q ss_pred cCchhHHhhhcccceEEeeccHHHHHH----HHHhcchhHHHhhccceeeEecCCcC---------CCCCCCCCcccccc
Q 007473 343 KGCLKEELNLQLEKVRRISLSEQKFEK----AAVSYGTDVVRFTQKNILRIYPKQTR---------VNSSNYKPMIGWIH 409 (602)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~S~sE~~~~k----l~~~~~~~~~~~~~~~l~RvYP~g~R---------idSSN~~P~~~W~~ 409 (602)
......+++|++|.++.+ +..+...+++.+|+++|+|+||+|+| ++||||+|+.+|++
T Consensus 175 ---------~~~~~~~~~sqdE~k~~~~~K~~~i~~~~~~~~~n~~~l~~nypsgtr~~~~~~~~a~~snn~~p~~~w~~ 245 (274)
T cd00137 175 ---------QKNRSYNISSQDEYKAYDDEKVKLIKATVQFVDYNKNQLSRNYPSGTSGGTAWYYYAMDSNNYMPQMFWNA 245 (274)
T ss_pred ---------ccCCCceEEeechhhhcchhhHHHHHhHHHHHhcCcceEEEEccCccCCCCcchhhHhhcCccChHHHhcc
Confidence 000123568888888854 34445667899999999999999999 99999999999999
Q ss_pred ---cceEeeccccCCCcceeeeccccccc
Q 007473 410 ---GAQMVALNMQGYGKSLWLMHGMFRAN 435 (602)
Q Consensus 410 ---G~QmVALN~QT~D~~m~lN~~~F~~N 435 (602)
|||||||||||.|++|+||+|+|+.|
T Consensus 246 ~~~g~qiValdfqt~~~~~~ln~~~f~~N 274 (274)
T cd00137 246 NPAGCGIVILDFQTMDLPMQQYMAVIEFN 274 (274)
T ss_pred ccCCceEEEeeCcCCCccHHHHhhhhccC
Confidence 99999999999999999999999976
No 31
>smart00149 PLCYc Phospholipase C, catalytic domain (part); domain Y. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=1e-45 Score=328.47 Aligned_cols=115 Identities=43% Similarity=0.614 Sum_probs=106.0
Q ss_pred ccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccccc
Q 007473 332 KRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIHGA 411 (602)
Q Consensus 332 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~ 411 (602)
++||+|+.+.++.++.+.....+ ..+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++||
T Consensus 1 S~Lv~y~~~~~f~~f~~~~~~~~-~~~~~S~~E~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~dSSNy~P~~~W~~G~ 79 (115)
T smart00149 1 SDLVIYCAPVKFRSFESAESKDP-FYEMSSFSETKAKKLLKKAPTDFVRYNQRQLSRVYPKGTRVDSSNYNPQVFWNAGC 79 (115)
T ss_pred CCEeeEecCCCCCCccchhhcCC-CceecccCHHHHHHHHHHhHHHHHHhccccceEECcCCCcCCCCCCCCHHHHcCCc
Confidence 47899998888877776654322 56899999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccccCCCcceeeecccccccccceeeecCCcc
Q 007473 412 QMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFL 447 (602)
Q Consensus 412 QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~l 447 (602)
|||||||||.|++||||+|||+.||+|||||||++|
T Consensus 80 QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVLKP~~l 115 (115)
T smart00149 80 QMVALNFQTPDKPMQLNQGMFRANGGCGYVLKPDFL 115 (115)
T ss_pred eEeEeecCCCChHHHHHhhHhhcCCCCCeEeCCCCC
Confidence 999999999999999999999999999999999986
No 32
>PF00387 PI-PLC-Y: Phosphatidylinositol-specific phospholipase C, Y domain This entry is for the whole phospholipase C protein; InterPro: IPR001711 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), an eukaryotic intracellular enzyme, plays an important role in signal transduction processes [] (see IPR001192 from INTERPRO). It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as 'X-box' (see IPR000909 from INTERPRO) and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. At the C-terminal of the Y-box, there is a C2 domain (see IPR000008 from INTERPRO) possibly involved in Ca-dependent membrane attachment.; GO: 0004435 phosphatidylinositol phospholipase C activity, 0006629 lipid metabolic process, 0007165 signal transduction, 0035556 intracellular signal transduction; PDB: 3OHM_B 2FJU_B 2ZKM_X 3QR1_D 3QR0_A 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=100.00 E-value=3.3e-46 Score=334.16 Aligned_cols=118 Identities=33% Similarity=0.552 Sum_probs=90.9
Q ss_pred ccccceEEecccccCchhHHhhhcccceEEeeccHHHHHHHHHhcchhHHHhhccceeeEecCCcCCCCCCCCCcccccc
Q 007473 330 AYKRLIAIHNGKLKGCLKEELNLQLEKVRRISLSEQKFEKAAVSYGTDVVRFTQKNILRIYPKQTRVNSSNYKPMIGWIH 409 (602)
Q Consensus 330 ~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~ 409 (602)
||++||+|+.+..+.++...-.. ....+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||++||++
T Consensus 1 ELSdLvvY~~s~~f~~~~~~~~~-~~~~~~~S~sE~~~~~l~~~~~~~l~~~~~~~l~RvyP~~~R~~SsN~~P~~~W~~ 79 (118)
T PF00387_consen 1 ELSDLVVYCRSVKFKSFEDSERK-KQPWHMSSFSESKAKKLVKEHPSELVEHNKRHLVRVYPSGTRIDSSNFNPLPFWNC 79 (118)
T ss_dssp HHHTTESSCEEE----HHHHHHH-TSTTEEEEEEHHHHHHHHHHCHHHHHHHHHHSEEEEE--TT-TT-----THHHHTT
T ss_pred ChhhhheeeccccCCCcCChhhc-CCccEEEeccHHHHHHHHHHccchHHHhcccceEEecCCccccCCCCCChHHHhhc
Confidence 57899998877776666553332 22678999999999999999999999999999999999999999999999999999
Q ss_pred cceEeeccccCCCcceeeecccccccccceeeecCCccC
Q 007473 410 GAQMVALNMQGYGKSLWLMHGMFRANAGCGYVKKPNFLL 448 (602)
Q Consensus 410 G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr 448 (602)
|||||||||||+|++||||+|||++||+|||||||++||
T Consensus 80 G~Q~vALN~Qt~d~~m~ln~g~F~~NG~cGYVLKP~~lR 118 (118)
T PF00387_consen 80 GCQMVALNFQTPDEPMQLNQGMFRQNGGCGYVLKPEYLR 118 (118)
T ss_dssp T-SEEEB-TTS-SHHHHHHHHHTTTGGG-SEEE--GGGT
T ss_pred cCccceeeccCCChhHHHHHhhhccCCCCCeEeCchhhC
Confidence 999999999999999999999999999999999999997
No 33
>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=2e-40 Score=306.36 Aligned_cols=134 Identities=48% Similarity=0.825 Sum_probs=128.2
Q ss_pred cCCCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHHh
Q 007473 111 QDMTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIK 190 (602)
Q Consensus 111 qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~ 190 (602)
|||++||+||||++|||||++|+|+.|+++..+|+++|.+||||+|||||++++ ++|+|+||+|+++.++|+|||++|+
T Consensus 1 ~d~~~pLs~~~I~gtH~sy~~~~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~ 79 (135)
T smart00148 1 QDMDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDHGCRCVELDCWDGPD-GEPVIYHGHTFTLPIKLSEVLEAIK 79 (135)
T ss_pred CCCCccHhhCEEcccccccccCccccCcccHHHHHHHHHhCCCEEEEEcccCCC-CCEEEEECCcccccEEHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999876 5699999999999999999999999
Q ss_pred hcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhh
Q 007473 191 ENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE-CLKEFPSPEE 245 (602)
Q Consensus 191 ~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~ 245 (602)
++||..+.+||||+||+||+.++|.+||++|+++||++|+.++.. ..+.+|||++
T Consensus 80 ~fl~~~p~e~VIl~l~~~~~~~~~~~l~~~l~~~~g~~l~~~~~~~~~~~~ps~~~ 135 (135)
T smart00148 80 DFAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTPPLTSSLEVLPSPEQ 135 (135)
T ss_pred HHHHhCCCCcEEEeehhhCCHHHHHHHHHHHHHHHhHhhcCCCCccCcCcCCCCCC
Confidence 999999999999999999999999999999999999999998854 4678999985
No 34
>PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B ....
Probab=100.00 E-value=3.7e-37 Score=288.64 Aligned_cols=143 Identities=29% Similarity=0.549 Sum_probs=129.1
Q ss_pred CCCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHHhhc
Q 007473 113 MTAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIKEN 192 (602)
Q Consensus 113 M~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~ 192 (602)
|+.|+|||||++||||||+++|+.|++....|.++|..||||++||||++++ +++.||||+++++.++|+|||++|+++
T Consensus 1 ms~P~th~si~~sh~t~~~~~~~~~~~Q~~~i~~QL~~GiR~lDlrv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~~f 79 (146)
T PF00388_consen 1 MSIPGTHDSISSSHNTYLTGGQLWSKTQSWSIREQLESGIRYLDLRVWDGND-GELVVYHGITSTSGITFEDVLNDIRDF 79 (146)
T ss_dssp TCSEGGGEEEGCBSSTTBSSTSHHC-B-SHHHHHHHHTT--EEEEEEEEETT-SSEEEEETTSEE-EEEHHHHHHHHHHH
T ss_pred CCCCcccceecccCCCcccccccccCcchHhHHHHHhccCceEEEEEEcCCC-CceEEEeCCEeeeeEeHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999865 469999999999999999999999999
Q ss_pred ccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC---CCCCCCChhhccccEEEecCC
Q 007473 193 AFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE---CLKEFPSPEELKYRIIISTKP 256 (602)
Q Consensus 193 AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K~ 256 (602)
+|..+.+||||++++||+.++|..+|++|+++||++|+.++.. ....+|+|++|||||||..||
T Consensus 80 l~~~p~E~VIl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ptl~elrgKIvl~~r~ 146 (146)
T PF00388_consen 80 LFEHPSEPVILSLKHEYSPEQQNKLAEILKEILGDRLYQPPPDPWYQENNLPTLGELRGKIVLLRRK 146 (146)
T ss_dssp TTHSTTS-EEEEEEEESTHHHHHHHHHHHHHHHGGGBTTSTTTTCSTTSSS-BTTTTTTSEEEEEE-
T ss_pred HhcCCCeEEEEEeecccchhhHHHHHHHHHHHHhhhhcCCcccccccCCCCCChHHhcCcEEEEEcC
Confidence 9999999999999999999999999999999999999998754 467999999999999999875
No 35
>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins. This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy
Probab=99.86 E-value=1.4e-21 Score=202.42 Aligned_cols=146 Identities=23% Similarity=0.377 Sum_probs=127.7
Q ss_pred cCCCCcccccccccCCcccccC------------Ccc--CCCCChHHHHHHHhcCCcEEEEEeecCCC------------
Q 007473 111 QDMTAPLSHYFIYTGHNSYLIG------------NQF--SSDCSDVPITKALKRGVRVIELDLWPNSA------------ 164 (602)
Q Consensus 111 qdM~~PLs~YfI~SSHNTYL~g------------~Ql--~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~------------ 164 (602)
.+.+.||+||+|-.|||+|..| +|+ ....+-.....+|..|+|-+|||+|..+.
T Consensus 3 ~~~~~pln~~~~igtHNSY~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~QLd~GvR~LELDv~~d~~gg~~a~P~~~~~ 82 (324)
T cd08589 3 AADALRLNQIQVVGTHNSYHKEIDPAELALLAVNPPLAEGLDYSHPPLADQLDSGVRQLELDVWADPEGGRYAHPLGLAP 82 (324)
T ss_pred ccCCCCccccEEEeecccccccCCchhhhhhcccccccccccCCCccHHHHHhhCcceEEEEEeecCCcccccccccccc
Confidence 3568999999999999999998 777 34455667789999999999999996443
Q ss_pred -------CCCceEeecccc---cccchHHHHHHHHhhcccc-cCCCceEEEecCCCCH------------HHHHHHHHHH
Q 007473 165 -------KDDVLVLHGRTL---TTPVELIKCLRAIKENAFS-ASPYPVILTFEDHLNP------------HLQAKVAQMI 221 (602)
Q Consensus 165 -------~~~piv~HG~Tl---ts~i~f~dvi~aI~~~AF~-~S~yPvILSlE~Hcs~------------~qQ~~ma~~l 221 (602)
+...-|+|+.++ |+..+|.+||..||+++|. .++|||+|.||.|.+. +-|..+++.+
T Consensus 83 ~~~~~~~~~g~~V~H~~~~d~~t~C~~l~~cL~~Ik~W~~anP~hvPv~I~Le~kd~~~~~~~~~~~~~~~~~~~ld~~i 162 (324)
T cd08589 83 DDAAVMKKPGWKVSHIPDLDNRNNCVTLEDCLDDVRAWSDAHPGHVPIFIKLELKDGFSALPGGGVPFTARGPAQLDALI 162 (324)
T ss_pred cccccccCCCeEEEcCCCcCCCCChhhHHHHHHHHHHHHHhCCCcccEEEEEEeccCCccccCcccccchhHHHHHHHHH
Confidence 344689999998 9999999999999999998 7999999999999987 7899999999
Q ss_pred HHHhhc-ccCCCCC-----CC------CCCCCChhhccccEEEecCC
Q 007473 222 TQTFGA-MLYSPES-----EC------LKEFPSPEELKYRIIISTKP 256 (602)
Q Consensus 222 ~~~~Gd-~L~~~~~-----~~------~~~lPSP~~Lk~KIlik~K~ 256 (602)
+++||+ +|++|+. .. ...+|||++|||||||--+.
T Consensus 163 ~~vfG~~~L~tPddvrg~~~tL~~av~~~~WPtl~~lrGKvl~~~~~ 209 (324)
T cd08589 163 RSVLGDDKLITPDDVRGGAATLDEAVRAGGWPTLSALRGKVLFVLDP 209 (324)
T ss_pred HHhcCCccEEcCccccccccchhhhhccCCCCChHHHCCCEEEEecC
Confidence 999999 9999974 22 26899999999999999875
No 36
>cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC). PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking
Probab=99.79 E-value=1.2e-18 Score=158.53 Aligned_cols=124 Identities=37% Similarity=0.555 Sum_probs=108.5
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCC-CcccccccCCCCCC-CCeeccEEEEEeecCCccEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPA-DKKMKSTKKKVDNW-TPVWDDEFTFPLTIPEMALLRVE 544 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~-d~~k~kTkvi~nn~-nPvWNEtf~F~v~~pela~Lrf~ 544 (602)
.+|+|+|++|++|+... .+..+..||||+|.+.+.+. +..+.||+++.++. ||+|||+|.|.+..++.++|+|.
T Consensus 2 ~~l~v~vi~a~~L~~~~----~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~~P~w~e~f~f~~~~~~~~~l~~~ 77 (128)
T cd00275 2 LTLTIKIISGQQLPKPK----GDKGSIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNPVWNETFEFDVTVPELAFLRFV 77 (128)
T ss_pred eEEEEEEEeeecCCCCC----CCCCCccCCEEEEEEEeCCCCCCCcEeeeeecCCCcCCccCCcEEEEEeCCCeEEEEEE
Confidence 46999999999997421 01345679999999988665 56778999988775 99999999999998888899999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEE
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
|||++.. ++++||++.++++.|..||++++|++..|++...++|+|+|++
T Consensus 78 V~d~~~~-~~~~iG~~~~~l~~l~~g~~~~~l~~~~~~~~~~~~l~v~~~~ 127 (128)
T cd00275 78 VYDEDSG-DDDFLGQACLPLDSLRQGYRHVPLLDSKGEPLELSTLFVHIDI 127 (128)
T ss_pred EEeCCCC-CCcEeEEEEEEhHHhcCceEEEEecCCCCCCCcceeEEEEEEE
Confidence 9999877 7999999999999999999999999999998888999999987
No 37
>cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins. This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity.
Probab=99.76 E-value=2e-18 Score=176.92 Aligned_cols=143 Identities=25% Similarity=0.337 Sum_probs=121.2
Q ss_pred CcCCCCcccccccccCCcccccCCccC----------CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc-
Q 007473 110 YQDMTAPLSHYFIYTGHNSYLIGNQFS----------SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT- 178 (602)
Q Consensus 110 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~----------g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts- 178 (602)
..||+.||++|+|-.|||+|..+..-. +....-.+...|.+|||.+|||||..+ +++.++||.....
T Consensus 3 ~ld~~~pL~~~~~~gTHNS~~s~~~~~~~~~~~~~~~~~nQ~~sI~~QL~~GvR~LdLdv~~~~--~~l~v~Hg~~~~~~ 80 (267)
T cd08590 3 NLDSNAPLCQAQILGTHNSYNSRAYGYGNRYHGVRYLDPNQELSITDQLDLGARFLELDVHWTT--GDLRLCHGGDHGYL 80 (267)
T ss_pred CCCCCCchhhceeeeecccccccccccccccccceeeccccCcCHHHHHhhCCcEEEEeeeeCC--CCEEEEccCccccc
Confidence 369999999999999999999876532 233334578999999999999999864 4689999987654
Q ss_pred ------cchHHHHHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC----CCCCCCChhhcc-
Q 007473 179 ------PVELIKCLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE----CLKEFPSPEELK- 247 (602)
Q Consensus 179 ------~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~----~~~~lPSP~~Lk- 247 (602)
...|++|++.|+++++....++|||.||+|++..++..+.+.|+++||++||.|+.. .....|+.++++
T Consensus 81 ~~~~~~~~~l~d~L~eI~~fL~~nP~EvViL~~e~~~~~~~~~~l~~~l~~~fGd~ly~P~~~~~~~~~~~wpTL~em~~ 160 (267)
T cd08590 81 GVCSSEDRLFEDGLNEIADWLNANPDEVVILYLEDHGDGGKDDELNALLNDAFGDLLYTPSDCDDLQGLPNWPTKEDMLN 160 (267)
T ss_pred cccccccchHHHHHHHHHHHHHhCCCCcEEEEEecCCCcccHHHHHHHHHHHhCCeEEcCCcccccccCCCCCCHHHHHh
Confidence 568999999999999999999999999999999888999999999999999998642 146789999996
Q ss_pred -ccEEEec
Q 007473 248 -YRIIIST 254 (602)
Q Consensus 248 -~KIlik~ 254 (602)
||.||--
T Consensus 161 ~GkrViv~ 168 (267)
T cd08590 161 SGKQVVLA 168 (267)
T ss_pred CCCEEEEE
Confidence 8877764
No 38
>cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.71 E-value=5.3e-17 Score=147.22 Aligned_cols=103 Identities=24% Similarity=0.371 Sum_probs=84.0
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCC--CCcccccccCCCCCCCCeeccEEEEEeec---CCccEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVP--ADKKMKSTKKKVDNWTPVWDDEFTFPLTI---PEMALLR 542 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p--~d~~k~kTkvi~nn~nPvWNEtf~F~v~~---pela~Lr 542 (602)
+|+|+|++|++|+.. + .+.+||||+|.+.|.. ....+++|+++.+++||+|||+|+|.+.. ++.+.|+
T Consensus 1 kL~V~Vi~A~~L~~~------d-~g~~DPYVkV~l~g~~~~~k~~k~kTkv~~~tlnPvwNE~f~F~v~~~~~~~~~~L~ 73 (120)
T cd08395 1 KVTVKVVAANDLKWQ------T-TGMFRPFVEVNLIGPHLSDKKRKFATKSKNNNWSPKYNETFQFILGNEDDPESYELH 73 (120)
T ss_pred CEEEEEEECcCCCcc------c-CCCCCCEEEEEEecCCCcccccEeeeEEecCCCCCccCcEEEEEeeCcCCCceeEEE
Confidence 489999999999642 2 2668999999998732 22345689999999999999999999974 3447899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCcc---EEEEcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLF 577 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~ 577 (602)
|.|+|+|..+++++||++++|+.++..+- .|+||.
T Consensus 74 ~~V~D~d~~~~dd~IG~~~l~l~~~~~~~~~~~w~~L~ 111 (120)
T cd08395 74 ICVKDYCFARDDRLVGVTVLQLRDIAQAGSCACWLPLG 111 (120)
T ss_pred EEEEEecccCCCCEEEEEEEEHHHCcCCCcEEEEEECc
Confidence 99999998778999999999999998764 566774
No 39
>cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2). A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o
Probab=99.66 E-value=1.2e-15 Score=137.73 Aligned_cols=113 Identities=21% Similarity=0.351 Sum_probs=92.7
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|++|++|+.. +..+.+||||+|.+.+.+ ..++||++++++.||+|||+|.|.+..+....|+|.|||+
T Consensus 2 L~V~vi~a~~L~~~------~~~~~~Dpyv~v~~~~~~--~~~~kT~vv~~t~nP~Wne~f~f~i~~~~~~~l~v~v~d~ 73 (119)
T cd04036 2 LTVRVLRATNITKG------DLLSTPDCYVELWLPTAS--DEKKRTKTIKNSINPVWNETFEFRIQSQVKNVLELTVMDE 73 (119)
T ss_pred eEEEEEEeeCCCcc------CCCCCCCcEEEEEEcCCC--CccCccceecCCCCCccceEEEEEeCcccCCEEEEEEEEC
Confidence 78999999999642 335678999999986532 3567999999999999999999998776567899999999
Q ss_pred CCCCCCCccEEEEEeCCCccCccE---EEEccCCCCCccCCeEEEEEEEE
Q 007473 549 SMPEKDEFAGQTCLPVFQLRPGIH---AVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~GyR---~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
|.. ++++||++.+|++.+..|.+ +++|.+. ..+.|.++|.+
T Consensus 74 d~~-~~~~iG~~~~~l~~l~~g~~~~~~~~L~~~-----~~g~l~~~~~~ 117 (119)
T cd04036 74 DYV-MDDHLGTVLFDVSKLKLGEKVRVTFSLNPQ-----GKEELEVEFLL 117 (119)
T ss_pred CCC-CCcccEEEEEEHHHCCCCCcEEEEEECCCC-----CCceEEEEEEe
Confidence 987 79999999999999998865 5666543 24678887765
No 40
>cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I. Rab GTPases recruit various effector proteins to organelles and vesicles. Rab11-family interacting proteins (FIPs) are involved in mediating the role of Rab11. FIPs can be divided into three classes: class I FIPs (Rip11a, Rip11b, RCP, and FIP2) which contain a C2 domain after N-terminus of the protein, class II FIPs (FIP3 and FIP4) which contain two EF-hands and a proline rich region, and class III FIPs (FIP1) which exhibits no homology to known protein domains. All FIP proteins contain a highly conserved, 20-amino acid motif at the C-terminus of the protein, known as Rab11/25 binding domain (RBD). Class I FIPs are thought to bind to endocytic membranes via their C2 domain, which interacts directly with phospholipids. Class II FIPs do not have any membrane binding domains leaving much to speculate about the mechanism involving FIP3 and FIP4 interactions with endocytic membranes. The member
Probab=99.65 E-value=1.1e-15 Score=139.48 Aligned_cols=115 Identities=21% Similarity=0.308 Sum_probs=94.1
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeec-----CCccEEEE
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTI-----PEMALLRV 543 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~-----pela~Lrf 543 (602)
++|+|++|++|+.. +..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+.. +....|.|
T Consensus 1 ~~V~V~~A~~L~~~------d~~g~~dpYv~v~l~~-----~~~kT~v~~~t~nP~Wne~f~F~v~~~~~~~~~~~~l~~ 69 (126)
T cd08682 1 VQVTVLQARGLLCK------GKSGTNDAYVIIQLGK-----EKYSTSVKEKTTSPVWKEECSFELPGLLSGNGNRATLQL 69 (126)
T ss_pred CEEEEEECcCCcCC------CCCcCCCceEEEEECC-----eeeeeeeecCCCCCEeCceEEEEecCcccCCCcCCEEEE
Confidence 57999999999632 3446689999999853 56799999999999999999999876 34568999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCcc--Cc---cEEEEccCCCCCcc-CCeEEEEEEE
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLR--PG---IHAVPLFDRKGEEL-GSARLLMRFE 594 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~--~G---yR~ipL~d~~g~~l-~~asL~v~i~ 594 (602)
.|||++..+++++||++.+||+.+. .| .+|.+|.+..++.. ..|.|.|.|+
T Consensus 70 ~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~W~~L~~~~~~~~~~~Gei~l~~~ 126 (126)
T cd08682 70 TVMHRNLLGLDKFLGQVSIPLNDLDEDKGRRRTRWFKLESKPGKDDKERGEIEVDIQ 126 (126)
T ss_pred EEEEccccCCCceeEEEEEEHHHhhccCCCcccEEEECcCCCCCCccccceEEEEeC
Confidence 9999998888999999999999986 45 47899987666433 4578888763
No 41
>cd08677 C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domain
Probab=99.65 E-value=5.3e-16 Score=139.59 Aligned_cols=99 Identities=18% Similarity=0.191 Sum_probs=83.1
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|+|+|+.|++|+. .+.+||||+|.+... ....+++|++++++.||+|||+|.|.|...++ ..|.|
T Consensus 13 ~~~L~V~vikA~~L~~---------~g~sDPYVKv~L~~~-~k~~k~kT~v~rktlnPvfnE~f~F~v~~~~l~~~tL~~ 82 (118)
T cd08677 13 KAELHVNILEAENISV---------DAGCECYISGCVSVS-EGQKEAQTALKKLALHTQWEEELVFPLPEEESLDGTLTL 82 (118)
T ss_pred CCEEEEEEEEecCCCC---------CCCCCeEEEEEEcCC-cCccEEEcceecCCCCCccccEEEEeCCHHHhCCcEEEE
Confidence 4579999999999851 134799999999642 22457799999999999999999999987666 57999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCc--cCccEEE
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQL--RPGIHAV 574 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L--~~GyR~i 574 (602)
+|||+|.++++++||++.+|++.+ ..|.+|+
T Consensus 83 ~V~d~Drfs~~d~IG~v~l~l~~~~~~~~~~~W 115 (118)
T cd08677 83 TLRCCDRFSRHSTLGELRLKLADVSMMLGAAQW 115 (118)
T ss_pred EEEeCCCCCCCceEEEEEEccccccCCccccch
Confidence 999999999999999999999975 6777764
No 42
>cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins. This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X
Probab=99.64 E-value=5.4e-16 Score=159.13 Aligned_cols=144 Identities=25% Similarity=0.295 Sum_probs=124.5
Q ss_pred CCCCcccccccccCCcccccCCccC-------CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHH
Q 007473 112 DMTAPLSHYFIYTGHNSYLIGNQFS-------SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIK 184 (602)
Q Consensus 112 dM~~PLs~YfI~SSHNTYL~g~Ql~-------g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~d 184 (602)
+.+.||+++.|-.|||+|..+.... +...-..+...|.+|+|++|||||...+.++..|+||.......+|.|
T Consensus 4 ~~~~~l~~~~ipGtHnS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GiR~~dlr~~~~~~~~~~~~~H~~~~~~~~~~~~ 83 (271)
T cd08557 4 LDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDPDDGDLYVCHGLFLLNGQTLED 83 (271)
T ss_pred cccCchhcccccccchhceeccCCCchhhhhHHhccCCCHHHHHhcCceEEEEEeeeecCCCcEEEEccccccCcccHHH
Confidence 5789999999999999998876642 233344567999999999999999875446789999988887899999
Q ss_pred HHHHHhhcccccCCCceEEEecCCCCHHH---HHHHHHHHHHHhhcccCCCCCCCCCCCCChhhcc-ccEEEecCC
Q 007473 185 CLRAIKENAFSASPYPVILTFEDHLNPHL---QAKVAQMITQTFGAMLYSPESECLKEFPSPEELK-YRIIISTKP 256 (602)
Q Consensus 185 vi~aI~~~AF~~S~yPvILSlE~Hcs~~q---Q~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk-~KIlik~K~ 256 (602)
|++.|+++.......+|||+||.+++... +..+++.|+++||+.++.+. ......|++++|+ ||+||-...
T Consensus 84 vL~~i~~fl~~~p~E~vil~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ptL~el~~gK~vi~~~~ 158 (271)
T cd08557 84 VLNEVKDFLDAHPSEVVILDLEHEYGGDNGEDHDELDALLRDVLGDPLYRPP-VRAGGWPTLGELRAGKRVLLFYF 158 (271)
T ss_pred HHHHHHHHHHHCCCcEEEEEEEccCCCcchhhHHHHHHHHHHHhCccccCCc-cccCCCCcHHHHhcCCeEEEEEC
Confidence 99999999999989999999999998875 89999999999999999875 3346789999999 999998654
No 43
>cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein
Probab=99.63 E-value=3.7e-15 Score=134.91 Aligned_cols=117 Identities=21% Similarity=0.305 Sum_probs=97.1
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
+|+|+|++|++|+.. +..+.+||||+|.+.+ ....+|+++.++.||+|||+|.|.+..++ ..|.|.|||
T Consensus 1 ~L~v~v~~a~~L~~~------d~~g~~Dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~D 69 (121)
T cd04042 1 QLDIHLKEGRNLAAR------DRGGTSDPYVKFKYGG----KTVYKSKTIYKNLNPVWDEKFTLPIEDVT-QPLYIKVFD 69 (121)
T ss_pred CeEEEEEEeeCCCCc------CCCCCCCCeEEEEECC----EEEEEeeeccCCCCCccceeEEEEecCCC-CeEEEEEEe
Confidence 389999999999642 3446789999999864 24679999999999999999999986553 679999999
Q ss_pred cCCCCCCCccEEEEEeCCCccCc---cEEEEccCCCCCccCCeEEEEEEEEE
Q 007473 548 YSMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 548 ~d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
++..+++++||++.+++..+..| ..+++|.+..+.. ..|+|.+.+++.
T Consensus 70 ~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~-~~G~l~l~~~~~ 120 (121)
T cd04042 70 YDRGLTDDFMGSAFVDLSTLELNKPTEVKLKLEDPNSDE-DLGYISLVVTLT 120 (121)
T ss_pred CCCCCCCcceEEEEEEHHHcCCCCCeEEEEECCCCCCcc-CceEEEEEEEEC
Confidence 99888899999999999999855 4589999887643 468999998875
No 44
>cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permut
Probab=99.63 E-value=2.4e-15 Score=136.78 Aligned_cols=97 Identities=21% Similarity=0.280 Sum_probs=82.8
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEe-ec--CCccEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPL-TI--PEMALLRV 543 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v-~~--pela~Lrf 543 (602)
..|.|+|+.|++|+.. + .+.+||||+|.+.+.+.+..++||++++++.||+|||+|.|.+ .. .....|+|
T Consensus 13 ~~L~V~Vi~A~~L~~~------~-~~~~DpyVkv~l~~~~~~~~~~kT~v~~~~~nP~wnE~F~f~~~~~~~l~~~~L~~ 85 (122)
T cd08381 13 GTLFVMVMHAKNLPLL------D-GSDPDPYVKTYLLPDPQKTTKRKTKVVRKTRNPTFNEMLVYDGLPVEDLQQRVLQV 85 (122)
T ss_pred CEEEEEEEEeeCCCCC------C-CCCCCCEEEEEEeeCCccCCceeCCccCCCCCCCcccEEEEecCChHHhCCCEEEE
Confidence 4699999999999742 3 4668999999998766666788999999999999999999987 32 23468999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
.|||+|..+++++||++.+||+.+..+
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~l~~~ 112 (122)
T cd08381 86 SVWSHDSLVENEFLGGVCIPLKKLDLS 112 (122)
T ss_pred EEEeCCCCcCCcEEEEEEEeccccccC
Confidence 999999888899999999999999755
No 45
>cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip). Tollip is a part of the Interleukin-1 receptor (IL-1R) signaling pathway. Tollip is proposed to link serine/threonine kinase IRAK to IL-1Rs as well as inhibiting phosphorylation of IRAK. There is a single C2 domain present in Tollip. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice varian
Probab=99.62 E-value=6.1e-15 Score=133.98 Aligned_cols=115 Identities=14% Similarity=0.157 Sum_probs=93.1
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCC-CCCCeeccEEEEEeecCCccEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVD-NWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~n-n~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
++|.|+|++|++++. .+ ++.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+... ...|.|.|
T Consensus 2 g~L~v~v~~Ak~l~~------~~-~g~sDPYv~i~lg~-----~~~kT~v~~~~~~nP~WNe~F~f~v~~~-~~~l~~~V 68 (121)
T cd04016 2 GRLSITVVQAKLVKN------YG-LTRMDPYCRIRVGH-----AVYETPTAYNGAKNPRWNKTIQCTLPEG-VDSIYIEI 68 (121)
T ss_pred cEEEEEEEEccCCCc------CC-CCCCCceEEEEECC-----EEEEeEEccCCCCCCccCeEEEEEecCC-CcEEEEEE
Confidence 469999999997632 23 46789999999954 5679999876 58999999999998654 35699999
Q ss_pred EecCCCCCCCccEEEEEeCC-CccCcc---EEEEccCCCCCccCCeEEEEEEEE
Q 007473 546 RKYSMPEKDEFAGQTCLPVF-QLRPGI---HAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~-~L~~Gy---R~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
||+|..++|++||.+.+||. .+.+|. .|.+|...+|++. .+.|.+.++|
T Consensus 69 ~d~d~~~~dd~iG~~~i~l~~~~~~g~~~~~W~~L~~~~~~~~-~g~i~l~l~y 121 (121)
T cd04016 69 FDERAFTMDERIAWTHITIPESVFNGETLDDWYSLSGKQGEDK-EGMINLVFSY 121 (121)
T ss_pred EeCCCCcCCceEEEEEEECchhccCCCCccccEeCcCccCCCC-ceEEEEEEeC
Confidence 99999998999999999995 677774 6889988777764 4677777654
No 46
>cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 12, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 13, do not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycl
Probab=99.61 E-value=1.4e-15 Score=140.98 Aligned_cols=112 Identities=15% Similarity=0.152 Sum_probs=91.9
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRVE 544 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf~ 544 (602)
..|+|+|+.|++|+.. +..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.|...++ ..|+|.
T Consensus 15 ~~L~V~Vi~A~nL~~~------~~~g~~DpyVkv~l~~~~~~~~k~kT~v~k~t~nP~~nE~f~F~v~~~~l~~~~l~~~ 88 (136)
T cd08406 15 ERLTVVVVKARNLVWD------NGKTTADPFVKVYLLQDGRKISKKKTSVKRDDTNPIFNEAMIFSVPAIVLQDLSLRVT 88 (136)
T ss_pred CEEEEEEEEeeCCCCc------cCCCCCCeEEEEEEEeCCccccccCCccccCCCCCeeceeEEEECCHHHhCCcEEEEE
Confidence 4699999999999642 34466899999999875555557799999999999999999999876554 679999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCccEEE-EccCCCCCcc
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPGIHAV-PLFDRKGEEL 584 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~GyR~i-pL~d~~g~~l 584 (602)
|+|+|..+++++||++.++..+..+|++|+ .+.+.-++++
T Consensus 89 V~~~d~~~~~~~iG~v~lg~~~~g~~~~hW~~ml~~~~~~v 129 (136)
T cd08406 89 VAESTEDGKTPNVGHVIIGPAASGMGLSHWNQMLASLRKPV 129 (136)
T ss_pred EEeCCCCCCCCeeEEEEECCCCCChhHHHHHHHHHCCCCee
Confidence 999998888999999999998888888876 3555445543
No 47
>cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.61 E-value=5.8e-15 Score=139.12 Aligned_cols=119 Identities=18% Similarity=0.271 Sum_probs=98.2
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCC-CCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVD-NWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~n-n~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
.|+|+|++|++|+.. +.++.+||||+|.+.+ .+.||+++.+ +.||+|||+|+|.+..+....|.|.|+
T Consensus 1 ~L~V~Vi~A~~L~~~------d~~g~sDPYV~v~l~~-----~~~kTk~~~~~t~nP~WNE~F~f~v~~~~~~~l~v~V~ 69 (150)
T cd04019 1 YLRVTVIEAQDLVPS------DKNRVPEVFVKAQLGN-----QVLRTRPSQTRNGNPSWNEELMFVAAEPFEDHLILSVE 69 (150)
T ss_pred CEEEEEEEeECCCCC------CCCCCCCeEEEEEECC-----EEeeeEeccCCCCCCcccCcEEEEecCccCCeEEEEEE
Confidence 389999999999642 4456789999999975 5778998877 599999999999987665678999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCc-------cEEEEccCCCC-----Cc-cCCeEEEEEEEEEE
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPG-------IHAVPLFDRKG-----EE-LGSARLLMRFEFYE 597 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~G-------yR~ipL~d~~g-----~~-l~~asL~v~i~~~e 597 (602)
|++..+++++||++.+||+.+..| -+|+||.+..| ++ ...+.|.|+|.|..
T Consensus 70 d~~~~~~dd~lG~v~i~L~~l~~~~~~~~~~~~W~~L~~~~~~~~~~k~~k~~g~l~l~i~~~~ 133 (150)
T cd04019 70 DRVGPNKDEPLGRAVIPLNDIERRVDDRPVPSRWFSLERPGGAMEQKKKRKFASRIHLRLCLDG 133 (150)
T ss_pred EecCCCCCCeEEEEEEEHHHCcccCCCCccCCceEECcCCCCcccccccCcccccEEEEEEecC
Confidence 999877899999999999998654 58899998765 22 35689999998864
No 48
>cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.61 E-value=5.2e-15 Score=135.19 Aligned_cols=118 Identities=18% Similarity=0.278 Sum_probs=93.9
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC-c--cEEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE-M--ALLRVE 544 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe-l--a~Lrf~ 544 (602)
+|+|+|++|++|+.. +..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..++ + ..|+|.
T Consensus 1 ~L~V~vi~A~~L~~~------d~~g~~dpyv~v~~~~-----~~~rT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~~ 69 (127)
T cd04022 1 KLVVEVVDAQDLMPK------DGQGSSSAYVELDFDG-----QKKRTRTKPKDLNPVWNEKLVFNVSDPSRLSNLVLEVY 69 (127)
T ss_pred CeEEEEEEeeCCCCC------CCCCCcCcEEEEEECC-----EEecceeEcCCCCCccceEEEEEccCHHHccCCeEEEE
Confidence 489999999999642 3345689999999875 4679999999999999999999987543 2 579999
Q ss_pred EEecCCCC-CCCccEEEEEeCCCcc-Cc---cEEEEccCCCCCccCCeEEEEEEEEE
Q 007473 545 VRKYSMPE-KDEFAGQTCLPVFQLR-PG---IHAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 545 V~D~d~~~-~dd~lGq~~lpL~~L~-~G---yR~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
|||.+... ++++||++.+|++.+. .| .+|.+|.......-..|.|.+++.+.
T Consensus 70 V~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 126 (127)
T cd04022 70 VYNDRRSGRRRSFLGRVRISGTSFVPPSEAVVQRYPLEKRGLFSRVRGEIGLKVYIT 126 (127)
T ss_pred EeeCCCCcCCCCeeeEEEEcHHHcCCCCCccceEeEeeeCCCCCCccEEEEEEEEEc
Confidence 99998775 7999999999999986 44 56788875432223467899888875
No 49
>cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3). RasA3 are members of GTPase activating protein 1 (GAP1), a Ras-specific GAP, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA3 contains an N-terminal C2 domain, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.61 E-value=7.9e-15 Score=137.85 Aligned_cols=108 Identities=26% Similarity=0.269 Sum_probs=88.2
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeec-----------C
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTI-----------P 536 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~-----------p 536 (602)
+|+|+|+.|++|+. ..+.+||||+|.+.+...+..++||++++++.||+|||+|.|.+.. |
T Consensus 1 kL~V~Vi~ArnL~~--------~~g~sDPYV~V~l~~~~~k~~~~kT~v~~~t~nP~wNE~F~F~v~~~~~~~~~~~~~~ 72 (148)
T cd04010 1 KLSVRVIECSDLAL--------KNGTCDPYASVTLIYSNKKQDTKRTKVKKKTNNPQFDEAFYFDVTIDSSPEKKQFEMP 72 (148)
T ss_pred CEEEEEEeCcCCCC--------CCCCCCceEEEEEeCCcccCcccCCccEeCCCCCccceEEEEEEecccccccccccCC
Confidence 48999999999963 2356899999999876555567899999999999999999999851 1
Q ss_pred --C--ccEEEEEEEecCCCCCCCccEEEEEeCCCccCc----cEEEEccCCCCCc
Q 007473 537 --E--MALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPG----IHAVPLFDRKGEE 583 (602)
Q Consensus 537 --e--la~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~G----yR~ipL~d~~g~~ 583 (602)
+ ...|.|.|||++..++++|||++.||+..+..+ -.|.+|.+.....
T Consensus 73 ~~~~~~~~L~i~V~d~~~~~~ddfLG~v~i~l~~l~~~~~~~~~W~~L~~~~~~~ 127 (148)
T cd04010 73 EEDAEKLELRVDLWHASMGGGDVFLGEVRIPLRGLDLQAGSHQAWYFLQPREEKS 127 (148)
T ss_pred cccccEEEEEEEEEcCCCCCCCceeEEEEEecccccccCCcCcceeecCCccccc
Confidence 2 257999999999877899999999999999876 3578887655443
No 50
>cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.60 E-value=8.8e-15 Score=133.84 Aligned_cols=114 Identities=19% Similarity=0.230 Sum_probs=90.0
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
.|.|+|++|++++.- ...+..+.+||||.|.+.+ .+.||++++++.||+|||+|.|.+..++ ..|.|.|||
T Consensus 1 ~L~v~v~~A~~~~~l---~~~d~~g~sDPYv~i~~g~-----~~~rTk~~~~~~nP~WnE~f~f~v~~~~-~~l~v~V~d 71 (126)
T cd08379 1 ILEVGILGAQGLDVL---RAKDGRGSTDAYCVAKYGP-----KWVRTRTVEDSSNPRWNEQYTWPVYDPC-TVLTVGVFD 71 (126)
T ss_pred CeEEEEEEeECCccc---cccccCCCCCeeEEEEECC-----EEeEcCcccCCCCCcceeEEEEEecCCC-CEEEEEEEE
Confidence 389999999994211 1124457789999999753 5779999999999999999999997654 489999999
Q ss_pred cCCCC------CCCccEEEEEeCCCccCccE---EEEccCCCCCcc-CCeEEE
Q 007473 548 YSMPE------KDEFAGQTCLPVFQLRPGIH---AVPLFDRKGEEL-GSARLL 590 (602)
Q Consensus 548 ~d~~~------~dd~lGq~~lpL~~L~~GyR---~ipL~d~~g~~l-~~asL~ 590 (602)
++... ++++||++.+||..+..|.+ ++||.+.++... ..+.|-
T Consensus 72 ~d~~~~~~~~~~dd~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~g~l~ 124 (126)
T cd08379 72 NSQSHWKEAVQPDVLIGKVRIRLSTLEDDRVYAHSYPLLSLNPSGVKKMGELE 124 (126)
T ss_pred CCCccccccCCCCceEEEEEEEHHHccCCCEEeeEEEeEeCCCCCccCCcEEE
Confidence 98763 79999999999999998854 789987665443 445553
No 51
>cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2
Probab=99.59 E-value=7.8e-15 Score=134.00 Aligned_cols=106 Identities=14% Similarity=0.232 Sum_probs=85.8
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
.+.|.|+|++|++|+... ...+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~Vi~a~~L~~~~-----~~~~~~DpyVkv~l~p~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~l~~~~L~~ 88 (125)
T cd04029 14 TQSLNVHVKECRNLAYGD-----EAKKRSNPYVKTYLLPDKSRQSKRKTSIKRNTTNPVYNETLKYSISHSQLETRTLQL 88 (125)
T ss_pred CCeEEEEEEEecCCCccC-----CCCCCCCcEEEEEEEcCCccccceEeeeeeCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 356999999999996421 12356899999999754443457799999999999999999999876544 47999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccC---ccEEEEc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRP---GIHAVPL 576 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~---GyR~ipL 576 (602)
.|||+|..+++++||++.++|+++.. .-.|+||
T Consensus 89 ~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~w~~l 124 (125)
T cd04029 89 SVWHYDRFGRNTFLGEVEIPLDSWNFDSQHEECLPL 124 (125)
T ss_pred EEEECCCCCCCcEEEEEEEeCCcccccCCcccEEEC
Confidence 99999988889999999999999854 3567776
No 52
>cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho
Probab=99.59 E-value=4.9e-15 Score=136.45 Aligned_cols=114 Identities=13% Similarity=0.163 Sum_probs=90.0
Q ss_pred CcceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCC-CCeeccEEEEEeecCCcc-EE
Q 007473 464 PVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNW-TPVWDDEFTFPLTIPEMA-LL 541 (602)
Q Consensus 464 p~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~-nPvWNEtf~F~v~~pela-~L 541 (602)
|..++|+|+|+.|++|+.. .....+||||+|.+.+.+.+..|+||++++++. ||+|||+|.|+|..++.. .|
T Consensus 11 p~~~rLtV~VikarnL~~~------~~~~~~dpYVKV~L~~~~k~~~KkKT~v~k~t~~~P~fNEsF~Fdv~~~~~~v~l 84 (135)
T cd08692 11 AVNSRIQLQILEAQNLPSS------STPLTLSFFVKVGMFSTGGLLYKKKTRLVKSSNGQVKWGETMIFPVTQQEHGIQF 84 (135)
T ss_pred CcCCeEEEEEEEccCCCcc------cCCCCCCcEEEEEEEECCCcceeecCccEECCCCCceecceEEEeCCchhheeEE
Confidence 3456799999999999742 123446999999999888887889999999995 799999999999876553 68
Q ss_pred EEEEEecCCCCCCCccEEEEEeCCCcc-CccEEE-EccCCCCCc
Q 007473 542 RVEVRKYSMPEKDEFAGQTCLPVFQLR-PGIHAV-PLFDRKGEE 583 (602)
Q Consensus 542 rf~V~D~d~~~~dd~lGq~~lpL~~L~-~GyR~i-pL~d~~g~~ 583 (602)
.+.|||+|..+++++||++.++.++.. .|.+|+ .+++.-+++
T Consensus 85 ~v~v~d~~~~~~n~~IG~v~lG~~~~~~~~~~hW~~m~~~pr~~ 128 (135)
T cd08692 85 LIKLYSRSSVRRKHFLGQVWISSDSSSSEAVEQWKDTIANPEKV 128 (135)
T ss_pred EEEEEeCCCCcCCceEEEEEECCccCCchhhhhHHHHHhCCCCe
Confidence 888999988888999999999998754 456665 344444444
No 53
>cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1). RasA1 is a GAP1 (GTPase activating protein 1), a Ras-specific GAP member, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA1 contains a C2 domain, a Ras-GAP domain, a pleckstrin homology (PH)-like domain, a SH3 domain, and 2 SH2 domains. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficki
Probab=99.58 E-value=3e-14 Score=130.28 Aligned_cols=118 Identities=18% Similarity=0.294 Sum_probs=95.4
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
..|+|+|++|++|+.. +.+||||+|.+.+ ....||++. ++.||+|||+|.|.+..+++..+.|.|+
T Consensus 4 ~~L~V~Vi~A~~L~~~---------~~~DPYv~v~l~~----~~~~kT~v~-~~~nP~WnE~f~f~~~~~~~~~l~v~v~ 69 (126)
T cd08400 4 RSLQLNVLEAHKLPVK---------HVPHPYCVISLNE----VKVARTKVR-EGPNPVWSEEFVFDDLPPDVNSFTISLS 69 (126)
T ss_pred eEEEEEEEEeeCCCCC---------CCCCeeEEEEECC----EeEEEeecC-CCCCCccCCEEEEecCCCCcCEEEEEEE
Confidence 3599999999999631 2479999999964 234678874 5799999999999977676667889999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCcc---EEEEccCCCC-CccCCeEEEEEEEEEEc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRKG-EELGSARLLMRFEFYEA 598 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~g-~~l~~asL~v~i~~~e~ 598 (602)
|++..+++++||++.+||..+..|. .|.+|....+ ..-..+.|.+++.|.++
T Consensus 70 d~~~~~~d~~iG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~~~~G~i~l~l~~~~~ 125 (126)
T cd08400 70 NKAKRSKDSEIAEVTVQLSKLQNGQETDEWYPLSSASPLKGGEWGSLRIRARYSHE 125 (126)
T ss_pred ECCCCCCCCeEEEEEEEHhHccCCCcccEeEEcccCCCCCCCcCcEEEEEEEEEcc
Confidence 9998888999999999999998886 4778876543 23356899999999874
No 54
>cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD). PLD hydrolyzes terminal phosphodiester bonds in diester glycerophospholipids resulting in the degradation of phospholipids. In vitro PLD transfers phosphatidic acid to primary alcohols. In plants PLD plays a role in germination, seedling growth, phosphatidylinositol metabolism, and changes in phospholipid composition. There is a single Ca(2+)/phospholipid-binding C2 domain in PLD. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins whic
Probab=99.58 E-value=2.6e-14 Score=135.88 Aligned_cols=125 Identities=20% Similarity=0.288 Sum_probs=100.0
Q ss_pred ceeEEEEEEeccCcccCccC--------------c----------CCCCCCCCCceEEEEEecCCCCcccccccCCCCCC
Q 007473 466 KKTLKVKAYMGDGWYLDFKQ--------------M----------DCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNW 521 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~--------------~----------~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~ 521 (602)
.++|.|+|+.|++|+..... . .....+.+||||+|.+.+. ...||++++++.
T Consensus 6 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~sDPYv~V~l~~~----~~~rT~v~~~~~ 81 (158)
T cd04015 6 HGTLDVTIYEADNLPNMDMFSEKLRRFFSKLVGCSEPTLKRPSSHRHVGKITSDPYATVDLAGA----RVARTRVIENSE 81 (158)
T ss_pred eeeeEEEEEEeccCCCcccccchhhHHHHHHHhhcccccccccccccCCCCCcCeEEEEEECCe----EeeEEEEeCCCC
Confidence 46799999999999853210 0 0013456899999999752 346999999999
Q ss_pred CCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCcc---EEEEccCCCCCccC-CeEEEEEEEEE
Q 007473 522 TPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRKGEELG-SARLLMRFEFY 596 (602)
Q Consensus 522 nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~g~~l~-~asL~v~i~~~ 596 (602)
||+|||+|.|.+..+ ...|.|.|+|+|..+ +++||++.+|++.+..|. +|++|.+..|++.. ++.|.|+++|.
T Consensus 82 nP~WnE~F~~~~~~~-~~~l~~~V~d~d~~~-~~~IG~~~i~l~~l~~g~~~~~w~~L~~~~~~~~~~~~~l~v~~~f~ 158 (158)
T cd04015 82 NPVWNESFHIYCAHY-ASHVEFTVKDNDVVG-AQLIGRAYIPVEDLLSGEPVEGWLPILDSNGKPPKPGAKIRVSLQFT 158 (158)
T ss_pred CCccceEEEEEccCC-CCEEEEEEEeCCCcC-CcEEEEEEEEhHHccCCCCcceEEECcCCCCCCCCCCCEEEEEEEEC
Confidence 999999999988654 357999999999775 789999999999998775 68999999899875 58999999873
No 55
>cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. The cds in this family contain multiple C2 domains as well as a C-terminal PRT domain. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal tran
Probab=99.57 E-value=3.4e-14 Score=127.72 Aligned_cols=117 Identities=21% Similarity=0.330 Sum_probs=96.7
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
+.|+|+|++|++|+.. +..+.+||||+|.+.+ .+.+|++++++.||.|||+|.|.+... ...|.|.||
T Consensus 1 g~l~v~v~~a~~L~~~------~~~~~~dPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~~~~~~~-~~~l~~~v~ 68 (119)
T cd08377 1 GFLQVKVIRASGLAAA------DIGGKSDPFCVLELVN-----ARLQTHTIYKTLNPEWNKIFTFPIKDI-HDVLEVTVY 68 (119)
T ss_pred CEEEEEEEeeeCCCCC------CCCCCCCcEEEEEECC-----EeeecceecCCcCCccCcEEEEEecCc-CCEEEEEEE
Confidence 3689999999999642 3345689999999864 356999999999999999999997532 357999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCcc-EEEEccCCCCCccCCeEEEEEEEE
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPGI-HAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~Gy-R~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
|++..+++++||++.+++..+..|. ++.+|.+..+..-..++|.+.++|
T Consensus 69 d~~~~~~~~~iG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~G~i~l~~~~ 118 (119)
T cd08377 69 DEDKDKKPEFLGKVAIPLLSIKNGERKWYALKDKKLRTRAKGSILLEMDV 118 (119)
T ss_pred ECCCCCCCceeeEEEEEHHHCCCCCceEEECcccCCCCceeeEEEEEEEe
Confidence 9998778999999999999998774 577898877666667899988876
No 56
>cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.57 E-value=2.7e-14 Score=133.72 Aligned_cols=108 Identities=20% Similarity=0.196 Sum_probs=87.1
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
..|.|+|+.|++|+.. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+. ..-..|.|.||
T Consensus 29 ~~L~V~Vi~ArnL~~~-----~~~~g~sDPYVKv~Llp~~~~~~k~KT~v~kktlnPvfNE~F~f~v~-l~~~~L~v~V~ 102 (146)
T cd04028 29 GQLEVEVIRARGLVQK-----PGSKVLPAPYVKVYLLEGKKCIAKKKTKIARKTLDPLYQQQLVFDVS-PTGKTLQVIVW 102 (146)
T ss_pred CEEEEEEEEeeCCCcc-----cCCCCCcCCeEEEEEECCCccccceeceecCCCCCCccCCeEEEEEc-CCCCEEEEEEE
Confidence 4699999999999631 12345689999999986554446889999999999999999999998 44568999999
Q ss_pred -ecCCCCCCCccEEEEEeCCCccCcc---EEEEccCCC
Q 007473 547 -KYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRK 580 (602)
Q Consensus 547 -D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~ 580 (602)
|++...++++||++.++|+.+..+. .|.+|.+..
T Consensus 103 ~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~Wy~L~~~~ 140 (146)
T cd04028 103 GDYGRMDKKVFMGVAQILLDDLDLSNLVIGWYKLFPTS 140 (146)
T ss_pred eCCCCCCCCceEEEEEEEcccccCCCCceeEEecCCcc
Confidence 5777778999999999999996553 566777543
No 57
>cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety
Probab=99.56 E-value=1.4e-14 Score=132.29 Aligned_cols=98 Identities=12% Similarity=0.173 Sum_probs=82.1
Q ss_pred eeEEEEEEeccCcccCccCcCCCCC-CCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFW-SPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~-s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
..|.|+|+.|++|+.. +.. +.+||||+|.+.+.+.+..++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 15 ~~L~V~vi~a~~L~~~------d~~~g~~dpyVkv~l~p~~~~~~~~kT~v~~~t~nP~~nE~f~f~v~~~~l~~~~L~~ 88 (125)
T cd08393 15 RELHVHVIQCQDLAAA------DPKKQRSDPYVKTYLLPDKSNRGKRKTSVKKKTLNPVFNETLRYKVEREELPTRVLNL 88 (125)
T ss_pred CEEEEEEEEeCCCCCc------CCCCCCCCcEEEEEEEcCCCccccccCccCcCCCCCccCceEEEECCHHHhCCCEEEE
Confidence 4699999999999742 222 46899999999865555567899999999999999999999875444 48999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
.|||+|..+++++||++.+||..+..+
T Consensus 89 ~V~d~~~~~~~~~iG~~~i~L~~~~~~ 115 (125)
T cd08393 89 SVWHRDSLGRNSFLGEVEVDLGSWDWS 115 (125)
T ss_pred EEEeCCCCCCCcEeEEEEEecCccccC
Confidence 999999888899999999999998654
No 58
>cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids
Probab=99.56 E-value=2e-14 Score=131.99 Aligned_cols=97 Identities=13% Similarity=0.170 Sum_probs=81.9
Q ss_pred eeEEEEEEeccCcccCccCcCCCC-CCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKF-WSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~-~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
..|.|+|+.|++|+.. +. .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~L~V~V~~a~nL~~~------d~~~g~~dpYVkv~llp~~~~~~k~kT~v~~~t~nPvfNE~F~f~v~~~~l~~~~L~v 88 (128)
T cd08392 15 SCLEITIKACRNLAYG------DEKKKKCHPYVKVCLLPDKSHNSKRKTAVKKGTVNPVFNETLKYVVEADLLSSRQLQV 88 (128)
T ss_pred CEEEEEEEecCCCCcc------CCCCCCCCeEEEEEEEeCCcccceeecccccCCCCCccceEEEEEcCHHHhCCcEEEE
Confidence 5699999999999642 22 256799999999866555567899999999999999999999876554 58999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccC
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRP 569 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~ 569 (602)
.|||.+..+++++||++.|||+.+.-
T Consensus 89 ~V~~~~~~~~~~~lG~~~i~L~~~~~ 114 (128)
T cd08392 89 SVWHSRTLKRRVFLGEVLIPLADWDF 114 (128)
T ss_pred EEEeCCCCcCcceEEEEEEEcCCccc
Confidence 99999988889999999999998853
No 59
>cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42). Nedd4 and Nedd4-2 are two of the nine members of the Human Nedd4 family. All vertebrates appear to have both Nedd4 and Nedd4-2 genes. They are thought to participate in the regulation of epithelial Na+ channel (ENaC) activity. They also have identical specificity for ubiquitin conjugating enzymes (E2). Nedd4 and Nedd4-2 are composed of a C2 domain, 2-4 WW domains, and a ubiquitin ligase Hect domain. Their WW domains can bind PPxY (PY) or LPSY motifs, and in vitro studies suggest that WW3 and WW4 of both proteins bind PY motifs in the key substrates, with WW3 generally exhibiting higher affinity. Most Nedd4 family members, especially Nedd4-2, also have multiple splice variants, which might play different roles in regulating their substrates. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.56 E-value=3.3e-14 Score=130.59 Aligned_cols=121 Identities=20% Similarity=0.289 Sum_probs=94.6
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCC--CcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPA--DKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~--d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
.|+|+|++|++|+.. +..+.+||||+|.+.+... ...+.+|++++++.||+|||+|.|.+... ...|.|.|
T Consensus 1 ~L~v~Vi~a~~L~~~------d~~~~~Dpyv~v~~~~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~~~v 73 (133)
T cd04033 1 ILRVKVLAGIDLAKK------DIFGASDPYVKISLYDPDGNGEIDSVQTKTIKKTLNPKWNEEFFFRVNPR-EHRLLFEV 73 (133)
T ss_pred CEEEEEEEeECCCcc------cCCCCcCcEEEEEEECCCCCCcccceeeeEEcCCCCCcEeeEEEEEEcCC-CCEEEEEE
Confidence 389999999999642 3446789999999986421 22356899999999999999999998643 45789999
Q ss_pred EecCCCCCCCccEEEEEeCCCccCc---------cEEEEccCCCCCccCCeEEEEEEEE
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRPG---------IHAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~G---------yR~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
||++..+++++||++.++++.+..+ -++.+|....+..-..+.|.+.+.|
T Consensus 74 ~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~l~~~~~~ 132 (133)
T cd04033 74 FDENRLTRDDFLGQVEVPLNNLPTETPGNERRYTFKDYLLRPRSSKSRVKGHLRLYMAY 132 (133)
T ss_pred EECCCCCCCCeeEEEEEEHHHCCCcCccccccccchheeeeecCCCCcceeEEEEEEee
Confidence 9999888899999999999998643 2567887544333346889888876
No 60
>cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recy
Probab=99.56 E-value=6.2e-15 Score=136.93 Aligned_cols=115 Identities=18% Similarity=0.220 Sum_probs=90.5
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
..+|+|+|+.|++|+.. ..+....+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~V~karnL~~~----d~~~~~~~DpYVKv~l~~~~~k~~kkkT~v~k~t~nPvfNE~f~F~v~~~~L~~~~L~~ 89 (138)
T cd08407 14 ANRLLVVVIKAKNLHSD----QLKLLLGIDVSVKVTLKHQNAKLKKKQTKRAKHKINPVWNEMIMFELPSELLAASSVEL 89 (138)
T ss_pred CCeEEEEEEEecCCCcc----ccCCCCCCCeEEEEEEEcCCcccceeccceeeCCCCCccccEEEEECCHHHhCccEEEE
Confidence 35699999999999642 1112233799999999865444457799999999999999999999886655 57999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCccEEE-EccCCCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIHAV-PLFDRKGEEL 584 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~i-pL~d~~g~~l 584 (602)
+|+|+|..+++++||++.+++.+-.++.+|+ .+++.-++++
T Consensus 90 ~V~d~d~~~~~d~iG~v~lg~~~~g~~~~hW~~ml~~p~~~v 131 (138)
T cd08407 90 EVLNQDSPGQSLPLGRCSLGLHTSGTERQHWEEMLDNPRRQI 131 (138)
T ss_pred EEEeCCCCcCcceeceEEecCcCCCcHHHHHHHHHhCCCCch
Confidence 9999999999999999999999866666665 4555445543
No 61
>cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD). PSD is involved in the biosynthesis of aminophospholipid by converting phosphatidylserine (PtdSer) to phosphatidylethanolamine (PtdEtn). There is a single C2 domain present and it is thought to confer PtdSer binding motif that is common to PKC and synaptotagmin. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM
Probab=99.56 E-value=1.7e-14 Score=128.50 Aligned_cols=97 Identities=9% Similarity=0.029 Sum_probs=79.3
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc-cEEEEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM-ALLRVEVR 546 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel-a~Lrf~V~ 546 (602)
.|.|+|++|++|+.... .......+||||+|.+.+ .++||++++++.||+|||+|.|.+...+. ..|.|.||
T Consensus 2 ~l~v~v~~A~~L~~~~~--~~~~~~~~DPYv~v~~~~-----~~~kT~v~~~t~nPvWne~f~f~v~~~~~~~~L~~~V~ 74 (108)
T cd04039 2 VVFMEIKSITDLPPLKN--MTRTGFDMDPFVIISFGR-----RVFRTSWRRHTLNPVFNERLAFEVYPHEKNFDIQFKVL 74 (108)
T ss_pred EEEEEEEeeeCCCCccc--cCCCCCccCceEEEEECC-----EeEeeeeecCCCCCcccceEEEEEeCccCCCEEEEEEE
Confidence 58999999999974211 111123479999999842 46789999999999999999999876554 47999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCcc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPGI 571 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~Gy 571 (602)
|+|..+++++||++.++|+.|..|+
T Consensus 75 D~d~~~~dd~IG~~~l~L~~l~~~~ 99 (108)
T cd04039 75 DKDKFSFNDYVATGSLSVQELLNAA 99 (108)
T ss_pred ECCCCCCCcceEEEEEEHHHHHhhC
Confidence 9998888999999999999998876
No 62
>cd04041 C2A_fungal C2 domain first repeat; fungal group. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligan
Probab=99.55 E-value=1.6e-14 Score=128.98 Aligned_cols=103 Identities=17% Similarity=0.130 Sum_probs=86.0
Q ss_pred eeEEEEEEeccCcccCccCcCCCCC-CCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC---ccEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFW-SPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE---MALLR 542 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~-s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe---la~Lr 542 (602)
+.|+|+|++|++|+.. +.. +.+||||+|.+.+.. ....+|++++++.||+|||+|.|.+..++ ...|.
T Consensus 1 G~L~V~v~~a~~L~~~------d~~~~~~Dpyv~v~~~~~~--~~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~ 72 (111)
T cd04041 1 GVLVVTIHRATDLPKA------DFGTGSSDPYVTASFAKFG--KPLYSTRIIRKDLNPVWEETWFVLVTPDEVKAGERLS 72 (111)
T ss_pred CEEEEEEEEeeCCCcc------cCCCCCCCccEEEEEccCC--CccEeeeeECCCCCCccceeEEEEeCchhccCCCEEE
Confidence 3689999999999642 333 568999999986532 34579999999999999999999887653 35899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCccEEEEcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLF 577 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~ 577 (602)
|.|||+|..+++++||++.+++..|.+--+|.|++
T Consensus 73 ~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~ 107 (111)
T cd04041 73 CRLWDSDRFTADDRLGRVEIDLKELIEDRNWMGRR 107 (111)
T ss_pred EEEEeCCCCCCCCcceEEEEEHHHHhcCCCCCccc
Confidence 99999998888999999999999998777788776
No 63
>cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.54 E-value=6.6e-14 Score=127.14 Aligned_cols=110 Identities=23% Similarity=0.303 Sum_probs=92.2
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|++|++|+.. .+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+....|.|.|||+
T Consensus 2 L~V~Vi~a~~L~~~----------~~Dpyv~v~l~~-----~~~kT~v~~~t~nP~Wne~F~f~~~~~~~~~L~~~v~d~ 66 (121)
T cd08378 2 LYVRVVKARGLPAN----------SNDPVVEVKLGN-----YKGSTKAIERTSNPEWNQVFAFSKDRLQGSTLEVSVWDK 66 (121)
T ss_pred EEEEEEEecCCCcc----------cCCCEEEEEECC-----ccccccccCCCCCCccceEEEEEcCCCcCCEEEEEEEeC
Confidence 89999999999631 479999999854 477999999999999999999998766667899999999
Q ss_pred CCCCCCCccEEEEEeCCCccC--------ccEEEEccCCCCCccCCeEEEEEEEE
Q 007473 549 SMPEKDEFAGQTCLPVFQLRP--------GIHAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~--------GyR~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
|.. ++++||++.++++.+.. .-+|.+|.+..+.. ..+.|.+.|.|
T Consensus 67 d~~-~~~~lG~~~i~l~~l~~~~~~~~~~~~~W~~L~~~~~~~-~~G~i~l~~~~ 119 (121)
T cd08378 67 DKA-KDDFLGGVCFDLSEVPTRVPPDSPLAPQWYRLEDKKGGR-VGGELMLAVWF 119 (121)
T ss_pred CCC-cCceeeeEEEEhHhCcCCCCCCCCCCcceEEccCCCCCc-cceEEEEEEEe
Confidence 876 68999999999999854 24899998877643 34788888876
No 64
>cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protei
Probab=99.54 E-value=6.7e-14 Score=125.47 Aligned_cols=111 Identities=18% Similarity=0.221 Sum_probs=90.9
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|++|++|+.. +..+.+||||++.+.+ .+.+|++++++.||.|||+|.|.+..+....|.|.|||+
T Consensus 2 ~~V~v~~a~~L~~~------~~~~~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~v~v~d~ 70 (116)
T cd08376 2 VTIVLVEGKNLPPM------DDNGLSDPYVKFRLGN-----EKYKSKVCSKTLNPQWLEQFDLHLFDDQSQILEIEVWDK 70 (116)
T ss_pred EEEEEEEEECCCCC------CCCCCCCcEEEEEECC-----EeEecccccCCCCCceeEEEEEEecCCCCCEEEEEEEEC
Confidence 78999999999642 3345689999999854 567999999999999999999998766567899999999
Q ss_pred CCCCCCCccEEEEEeCCCccCcc---EEEEccCCCCCccCCeEEEEEEEEE
Q 007473 549 SMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
+..+++++||++.++|+.+..+- .+++|.+. .|.|++++.+.
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~------~G~~~~~~~~~ 115 (116)
T cd08376 71 DTGKKDEFIGRCEIDLSALPREQTHSLELELEDG------EGSLLLLLTLT 115 (116)
T ss_pred CCCCCCCeEEEEEEeHHHCCCCCceEEEEEccCC------CcEEEEEEEec
Confidence 98888999999999999987653 35677654 36777777663
No 65
>cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins. Saccharomyces cerevisiae Inn1 associates with the contractile actomyosin ring at the end of mitosis and is needed for cytokinesis. The C2 domain of Inn1, located at the N-terminus, is required for ingression of the plasma membrane. The C-terminus is relatively unstructured and contains eight PXXP motifs that are thought to mediate interaction of Inn1 with other proteins with SH3 domains in the cytokinesis proteins Hof1 (an F-BAR protein) and Cyk3 (whose overexpression can restore primary septum formation in Inn1Delta cells) as well as recruiting Inn1 to the bud-neck by binding to Cyk3. Inn1 and Cyk3 appear to cooperate in activating chitin synthase Chs2 for primary septum formation, which allows coordination of actomyosin ring contraction with ingression of the cleavage furrow. It is thought that the C2 domain of Inn1 helps to preserve the link between the actomyosin ring and the plasma membrane, contr
Probab=99.54 E-value=4.6e-14 Score=126.89 Aligned_cols=114 Identities=20% Similarity=0.245 Sum_probs=90.7
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCC-CCCCeeccEEEEEeecCCccEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVD-NWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~n-n~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
+.|+|+|++|++|+.. +..+.+||||+|.+.+ .+++|+++.+ +.||+|||+|.|.+..+....|.|.|
T Consensus 1 g~L~V~v~~A~~L~~~------~~~~~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~~l~i~v 69 (118)
T cd08681 1 GTLVVVVLKARNLPNK------RKLDKQDPYCVLRIGG-----VTKKTKTDFRGGQHPEWDEELRFEITEDKKPILKVAV 69 (118)
T ss_pred CEEEEEEEEccCCCCC------CcCCCCCceEEEEECC-----CccccccccCCCCCCccCceEEEEecCCCCCEEEEEE
Confidence 3699999999999642 3456789999999865 4678988765 68999999999999876667899999
Q ss_pred EecCCCCCCCccEEEEEeCCCccCc---cEEEEccCCCCCccCCeEEEEEEEE
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
||++..+ +++||++.++++.+..| -.+.+|.+. |+ ..+.|.++++|
T Consensus 70 ~d~~~~~-~~~iG~~~~~l~~~~~~~~~~~w~~L~~~-~~--~~G~i~l~l~f 118 (118)
T cd08681 70 FDDDKRK-PDLIGDTEVDLSPALKEGEFDDWYELTLK-GR--YAGEVYLELTF 118 (118)
T ss_pred EeCCCCC-CcceEEEEEecHHHhhcCCCCCcEEeccC-Cc--EeeEEEEEEEC
Confidence 9998766 89999999999987554 456788643 33 34788888764
No 66
>cd08373 C2A_Ferlin C2 domain first repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.54 E-value=8.2e-14 Score=127.18 Aligned_cols=113 Identities=19% Similarity=0.322 Sum_probs=94.9
Q ss_pred EEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecC--CccEEEEEEEecCC
Q 007473 473 AYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIP--EMALLRVEVRKYSM 550 (602)
Q Consensus 473 Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~p--ela~Lrf~V~D~d~ 550 (602)
|++|++|+. ..+.+||||+|.+.+ .+++|++++++.||+|||+|.|.+..+ +...|.|.|||++.
T Consensus 2 vi~a~~L~~--------~~g~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~Wne~f~f~~~~~~~~~~~l~~~v~d~~~ 68 (127)
T cd08373 2 VVSLKNLPG--------LKGKGDRIAKVTFRG-----VKKKTRVLENELNPVWNETFEWPLAGSPDPDESLEIVVKDYEK 68 (127)
T ss_pred eEEeeCCcc--------cCCCCCCEEEEEECC-----EeeecceeCCCcCCcccceEEEEeCCCcCCCCEEEEEEEECCC
Confidence 678888853 245689999999865 467999999999999999999998754 45689999999998
Q ss_pred CCCCCccEEEEEeCCCccCcc---EEEEccCCCCCccCCeEEEEEEEEEEcc
Q 007473 551 PEKDEFAGQTCLPVFQLRPGI---HAVPLFDRKGEELGSARLLMRFEFYEAD 599 (602)
Q Consensus 551 ~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~g~~l~~asL~v~i~~~e~~ 599 (602)
.+++++||++.++++.+..+. .++||.+..+.++. +.|.+.++|.+.+
T Consensus 69 ~~~d~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~~~-~~l~l~~~~~~~~ 119 (127)
T cd08373 69 VGRNRLIGSATVSLQDLVSEGLLEVTEPLLDSNGRPTG-ATISLEVSYQPPD 119 (127)
T ss_pred CCCCceEEEEEEEhhHcccCCceEEEEeCcCCCCCccc-EEEEEEEEEeCCC
Confidence 888999999999999998664 47899998887765 7999999988754
No 67
>cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.53 E-value=7.7e-14 Score=126.53 Aligned_cols=105 Identities=19% Similarity=0.232 Sum_probs=83.5
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeec-CC--ccEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTI-PE--MALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~-pe--la~Lr 542 (602)
.+.|+|+|++|++|+.. +..+.+||||+|.+.+...+..++||++++++.||+|||+|.|.+.. .+ ...|+
T Consensus 15 ~~~L~V~vi~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~l~ 88 (125)
T cd04031 15 TSQLIVTVLQARDLPPR------DDGSLRNPYVKVYLLPDRSEKSKRRTKTVKKTLNPEWNQTFEYSNVRRETLKERTLE 88 (125)
T ss_pred CCEEEEEEEEecCCCCc------CCCCCCCCEEEEEEccCCCccccccccccCCCCCCccccEEEEcccCHHHhCCCEEE
Confidence 35699999999999642 33466899999999865555567899999999999999999998643 22 36899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCcc--CccEEEEc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLR--PGIHAVPL 576 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~--~GyR~ipL 576 (602)
|.|||++..+++++||++.++|+... .+-.|.+|
T Consensus 89 ~~V~d~~~~~~~~~iG~~~i~l~~~~~~~~~~W~~L 124 (125)
T cd04031 89 VTVWDYDRDGENDFLGEVVIDLADALLDDEPHWYPL 124 (125)
T ss_pred EEEEeCCCCCCCcEeeEEEEecccccccCCcceEEC
Confidence 99999998888999999999999732 23445555
No 68
>cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling s
Probab=99.53 E-value=1.8e-14 Score=133.20 Aligned_cols=113 Identities=17% Similarity=0.140 Sum_probs=91.4
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|.|+|++|++|+.. +..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~vi~a~~L~~~------d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~k~t~nP~w~e~F~f~v~~~~~~~~~l~~ 87 (136)
T cd08404 14 TNRLTVVVLKARHLPKM------DVSGLADPYVKVNLYYGKKRISKKKTHVKKCTLNPVFNESFVFDIPSEELEDISVEF 87 (136)
T ss_pred CCeEEEEEEEeeCCCcc------ccCCCCCeEEEEEEEcCCceeeeEcCccccCCCCCccCceEEEECCHHHhCCCEEEE
Confidence 34699999999999642 34567899999999754433456799999999999999999999875443 46899
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCccEEE-EccCCCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIHAV-PLFDRKGEEL 584 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~i-pL~d~~g~~l 584 (602)
.|||+|..+++++||++.+++.+...|.+++ +|.+..|+++
T Consensus 88 ~v~d~d~~~~~~~iG~~~~~~~~~~~~~~~w~~l~~~~~~~i 129 (136)
T cd08404 88 LVLDSDRVTKNEVIGRLVLGPKASGSGGHHWKEVCNPPRRQI 129 (136)
T ss_pred EEEECCCCCCCccEEEEEECCcCCCchHHHHHHHHhCCCCee
Confidence 9999998888999999999999977777765 4566667765
No 69
>cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein. The members in this cd are named after the Human C21orf25 which contains a single C2 domain. Several other members contain a C1 domain downstream of the C2 domain. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a
Probab=99.52 E-value=1.3e-13 Score=125.87 Aligned_cols=121 Identities=23% Similarity=0.312 Sum_probs=96.0
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|.|+|++|++|+. ..+.+||||++.+.+ ...++||++++++.||+|||+|.|.+.. +...|.|.|||+
T Consensus 1 l~v~v~~A~~L~~--------~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~Wne~f~f~~~~-~~~~l~~~v~d~ 68 (126)
T cd08678 1 LLVKNIKANGLSE--------AAGSSNPYCVLEMDE---PPQKYQSSTQKNTSNPFWDEHFLFELSP-NSKELLFEVYDN 68 (126)
T ss_pred CEEEEEEecCCCC--------CCCCcCCEEEEEECC---CCcEEEeEEEecCCCCccCceEEEEeCC-CCCEEEEEEEEC
Confidence 5799999999963 245689999999853 1246799999999999999999999853 345799999999
Q ss_pred CCCCCCCccEEEEEeCCCccCc---cEEEEccCCCCC-ccCCeEEEEEEEEEEcccc
Q 007473 549 SMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGE-ELGSARLLMRFEFYEADVL 601 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~-~l~~asL~v~i~~~e~~~~ 601 (602)
+..+++++||++.++++.+..+ -.++||....++ .-..|+|.+.+.|.+..=+
T Consensus 69 ~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~l~l~~~~~~~~~~ 125 (126)
T cd08678 69 GKKSDSKFLGLAIVPFDELRKNPSGRQIFPLQGRPYEGDSVSGSITVEFLFMEPAEL 125 (126)
T ss_pred CCCCCCceEEEEEEeHHHhccCCceeEEEEecCCCCCCCCcceEEEEEEEEeccccC
Confidence 9888899999999999998754 456788755442 2246899999999886543
No 70
>cd08680 C2_Kibra C2 domain found in Human protein Kibra. Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom
Probab=99.52 E-value=6.1e-14 Score=128.01 Aligned_cols=97 Identities=16% Similarity=0.240 Sum_probs=81.1
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCC-cccccccCCCCCCCCeeccEEEEEeecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPAD-KKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d-~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lr 542 (602)
...|.|+|+.|++|+.. +..+.+||||+|.+.+.... ..++||++++++.||+|||+|+|.+...++ ..|+
T Consensus 13 ~~~L~V~V~~arnL~~~------~~~~~~dpyVKv~Llp~~~~~~~~~kT~v~~~t~nPvfnE~F~f~v~~~~L~~~~L~ 86 (124)
T cd08680 13 DSSLVISVEQLRNLSAL------SIPENSKVYVRVALLPCSSSTSCLFRTKALEDQDKPVFNEVFRVPISSTKLYQKTLQ 86 (124)
T ss_pred CCEEEEEEeEecCCccc------ccCCCCCeEEEEEEccCCCCCCceEEcCccCCCCCCccccEEEEECCHHHhhcCEEE
Confidence 34699999999999642 23356899999999865443 357899999999999999999999877665 4899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
|+||+.+..+++++||++.++|+.+.
T Consensus 87 ~~V~~~~~~~~~~~lG~~~i~L~~~~ 112 (124)
T cd08680 87 VDVCSVGPDQQEECLGGAQISLADFE 112 (124)
T ss_pred EEEEeCCCCCceeEEEEEEEEhhhcc
Confidence 99999998888999999999999884
No 71
>cd08375 C2_Intersectin C2 domain present in Intersectin. A single instance of the C2 domain is located C terminally in the intersectin protein. Intersectin functions as a scaffolding protein, providing a link between the actin cytoskeleton and the components of endocytosis and plays a role in signal transduction. In addition to C2, intersectin contains several additional domains including: Eps15 homology domains, SH3 domains, a RhoGEF domain, and a PH domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking pro
Probab=99.52 E-value=1.3e-13 Score=127.86 Aligned_cols=113 Identities=19% Similarity=0.278 Sum_probs=90.3
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
+.|+|+|++|++|+.. +..+.+||||+|.+.+ .++||++++++.||.|||+|.|.+..+....|.|.||
T Consensus 15 G~L~V~Vi~A~~L~~~------d~~g~~DPYv~v~~~~-----~~~kT~vi~~t~nP~Wne~f~f~v~~~~~~~l~i~V~ 83 (136)
T cd08375 15 GRLMVVIVEGRDLKPC------NSNGKSDPYCEVSMGS-----QEHKTKVVSDTLNPKWNSSMQFFVKDLEQDVLCITVF 83 (136)
T ss_pred EEEEEEEEEeeCCCCC------CCCCCcCcEEEEEECC-----EeeeccccCCCCCCccCceEEEEecCccCCEEEEEEE
Confidence 6799999999999642 3456789999999843 4689999999999999999999998776788999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccC------c--cEEEEccCCCCCccCCeEEEEEEEE
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRP------G--IHAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~------G--yR~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
|+|..+++++||++.+++..+.. + +++++|.. ...+.+.+.|.+
T Consensus 84 D~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~-----~~~g~i~l~~~~ 135 (136)
T cd08375 84 DRDFFSPDDFLGRTEIRVADILKETKESKGPITKRLLLHE-----VPTGEVVVKLDL 135 (136)
T ss_pred ECCCCCCCCeeEEEEEEHHHhccccccCCCcEEEEecccc-----ccceeEEEEEEe
Confidence 99988889999999999999864 1 24455532 233566666654
No 72
>cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of the class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis. It, like synaptotagmin-2, has an N-glycosylated N-terminus. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are:
Probab=99.51 E-value=2.9e-14 Score=131.78 Aligned_cols=113 Identities=15% Similarity=0.176 Sum_probs=90.7
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
.++|+|+|++|++|+.. +..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 14 ~~~l~V~Vi~a~~L~~~------d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~ 87 (136)
T cd08402 14 AGKLTVVILEAKNLKKM------DVGGLSDPYVKIHLMQNGKRLKKKKTTIKKRTLNPYYNESFSFEVPFEQIQKVHLIV 87 (136)
T ss_pred CCeEEEEEEEeeCCCcc------cCCCCCCCeEEEEEEECCcccceeeccceeCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 35699999999999642 34567899999999754444456789999999999999999999875554 47999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCccEEE-EccCCCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIHAV-PLFDRKGEEL 584 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~i-pL~d~~g~~l 584 (602)
.|||++..+++++||++.+++.+...++.|+ +|....++++
T Consensus 88 ~v~d~~~~~~~~~iG~~~i~~~~~~~~~~~W~~~~~~~~~~~ 129 (136)
T cd08402 88 TVLDYDRIGKNDPIGKVVLGCNATGAELRHWSDMLASPRRPI 129 (136)
T ss_pred EEEeCCCCCCCceeEEEEECCccCChHHHHHHHHHhCCCCee
Confidence 9999998888999999999999987777554 6666655554
No 73
>cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.51 E-value=1.4e-13 Score=123.17 Aligned_cols=111 Identities=22% Similarity=0.369 Sum_probs=91.2
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|++|++++.. +..+.+||||+|.+.| ...++|+++.++.||+|||+|.|.+.......|.|.|||+
T Consensus 1 l~v~vi~a~~L~~~------~~~~~~dpyv~v~~~~----~~~~~T~v~~~~~~P~Wne~f~~~~~~~~~~~l~~~v~d~ 70 (115)
T cd04040 1 LTVDVISAENLPSA------DRNGKSDPFVKFYLNG----EKVFKTKTIKKTLNPVWNESFEVPVPSRVRAVLKVEVYDW 70 (115)
T ss_pred CEEEEEeeeCCCCC------CCCCCCCCeEEEEECC----CcceeeceecCCCCCcccccEEEEeccCCCCEEEEEEEeC
Confidence 57999999999642 2345679999999865 2347899999999999999999998765567899999999
Q ss_pred CCCCCCCccEEEEEeCCCccCc---cEEEEccCCCCCccCCeEEEE
Q 007473 549 SMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEELGSARLLM 591 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~l~~asL~v 591 (602)
+..+++++||++.+++..+..| ..+++|....|.. .++||+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~g~~~--~~~~~~ 114 (115)
T cd04040 71 DRGGKDDLLGSAYIDLSDLEPEETTELTLPLDGQGGGK--LGAVFL 114 (115)
T ss_pred CCCCCCCceEEEEEEHHHcCCCCcEEEEEECcCCCCcc--CceEEc
Confidence 9888899999999999999887 6889998766654 456764
No 74
>cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4. RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such a
Probab=99.51 E-value=1.5e-13 Score=124.61 Aligned_cols=115 Identities=18% Similarity=0.239 Sum_probs=90.0
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
.|+|+|++|++|+.. +..+.+||||+|.+.+ .+.+|++++++.||+|||+|.|.+..+....|.|.|||
T Consensus 1 ~L~v~vi~a~~L~~~------d~~~~~DPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~~~v~d 69 (123)
T cd04025 1 RLRCHVLEARDLAPK------DRNGTSDPFVRVFYNG-----QTLETSVVKKSCYPRWNEVFEFELMEGADSPLSVEVWD 69 (123)
T ss_pred CEEEEEEEeeCCCCC------CCCCCcCceEEEEECC-----EEEeceeecCCCCCccCcEEEEEcCCCCCCEEEEEEEE
Confidence 389999999999632 3345689999999854 45789999999999999999999887666789999999
Q ss_pred cCCCCCCCccEEEEEeCCCccCc---cEEEEccCCCCCc----cCCeEEEEEE
Q 007473 548 YSMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEE----LGSARLLMRF 593 (602)
Q Consensus 548 ~d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~----l~~asL~v~i 593 (602)
++..+++++||++.+++..+..+ ..|..|.....++ -..++|.+.|
T Consensus 70 ~~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~~G~l~~~~ 122 (123)
T cd04025 70 WDLVSKNDFLGKVVFSIQTLQQAKQEEGWFRLLPDPRAEEESGGNLGSLRLKV 122 (123)
T ss_pred CCCCCCCcEeEEEEEEHHHcccCCCCCCEEECCCCCCCCccccCceEEEEEEe
Confidence 99888899999999999998654 3566776533221 1346666655
No 75
>KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=99.51 E-value=3.6e-14 Score=133.06 Aligned_cols=92 Identities=23% Similarity=0.404 Sum_probs=80.6
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
+.|+|+|+.|.+|.. .|..+.+||||.+.+.+ ++.||+++++|.||+|||+|+|.+..| ...|++.||
T Consensus 6 GLL~v~v~~g~~L~~------rD~~~sSDPyVVl~lg~-----q~lkT~~v~~n~NPeWNe~ltf~v~d~-~~~lkv~Vy 73 (168)
T KOG1030|consen 6 GLLRVRVKRGKNLAI------RDFLGSSDPYVVLELGN-----QKLKTRVVYKNLNPEWNEELTFTVKDP-NTPLKVTVY 73 (168)
T ss_pred eEEEEEEEeecCeee------eccccCCCCeEEEEECC-----eeeeeeeecCCCCCcccceEEEEecCC-CceEEEEEE
Confidence 569999999999843 34446789999999875 688999999999999999999999887 457999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
|+|.+++|||+|.+.|||..+..+
T Consensus 74 D~D~fs~dD~mG~A~I~l~p~~~~ 97 (168)
T KOG1030|consen 74 DKDTFSSDDFMGEATIPLKPLLEA 97 (168)
T ss_pred eCCCCCcccccceeeeccHHHHHH
Confidence 999999999999999999988654
No 76
>cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm
Probab=99.51 E-value=1.1e-13 Score=122.32 Aligned_cols=96 Identities=26% Similarity=0.340 Sum_probs=81.5
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|.|+|++|++|+.. +..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..++...|.|.|+|+
T Consensus 2 L~V~v~~A~~L~~~------~~~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~v~v~d~ 70 (105)
T cd04050 2 LFVYLDSAKNLPLA------KSTKEPSPYVELTVGK-----TTQKSKVKERTNNPVWEEGFTFLVRNPENQELEIEVKDD 70 (105)
T ss_pred EEEEEeeecCCCCc------ccCCCCCcEEEEEECC-----EEEeCccccCCCCCcccceEEEEeCCCCCCEEEEEEEEC
Confidence 88999999999742 2345689999999975 577899999999999999999999988888999999998
Q ss_pred CCCCCCCccEEEEEeCCCccCc-----cEEEEccC
Q 007473 549 SMPEKDEFAGQTCLPVFQLRPG-----IHAVPLFD 578 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~G-----yR~ipL~d 578 (602)
+. +++||++.++|..+..+ -+|.+|.+
T Consensus 71 ~~---~~~iG~~~i~l~~l~~~~~~~~~~w~~L~~ 102 (105)
T cd04050 71 KT---GKSLGSLTLPLSELLKEPDLTLDQPFPLDN 102 (105)
T ss_pred CC---CCccEEEEEEHHHhhccccceeeeeEecCC
Confidence 74 78999999999988643 36778764
No 77
>cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and
Probab=99.50 E-value=1.6e-13 Score=124.62 Aligned_cols=98 Identities=20% Similarity=0.283 Sum_probs=81.1
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
..+|+|+|++|++|+.. +..+.+||||+|.+.+. ...++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 15 ~~~L~V~v~~a~~L~~~------d~~~~~dpyv~v~l~~~--~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~ 86 (124)
T cd08385 15 SNQLTVGIIQAADLPAM------DMGGTSDPYVKVYLLPD--KKKKFETKVHRKTLNPVFNETFTFKVPYSELGNKTLVF 86 (124)
T ss_pred CCEEEEEEEEeeCCCCc------cCCCCCCCEEEEEEEcC--CCCceecccCcCCCCCceeeeEEEeCCHHHhCCCEEEE
Confidence 35699999999999642 33456899999999743 3356799999999999999999999876544 47999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGI 571 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~Gy 571 (602)
.|||+|..+++++||++.+|++.+..|.
T Consensus 87 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~ 114 (124)
T cd08385 87 SVYDFDRFSKHDLIGEVRVPLLTVDLGH 114 (124)
T ss_pred EEEeCCCCCCCceeEEEEEecCcccCCC
Confidence 9999998888999999999999986653
No 78
>cd04032 C2_Perforin C2 domain of Perforin. Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few
Probab=99.49 E-value=2.1e-13 Score=124.88 Aligned_cols=93 Identities=22% Similarity=0.267 Sum_probs=78.4
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEe-ecCCccEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPL-TIPEMALLRVE 544 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v-~~pela~Lrf~ 544 (602)
.++|+|+|++|++|+. +..+.+||||+|.+.| .++||++++++.||+|||+|.|.. ..+....|+|.
T Consensus 27 ~~~L~V~V~~A~~L~~-------d~~g~~DPYVkV~~~~-----~~~kT~vi~~t~nPvWNE~F~f~~~~~~~~~~L~v~ 94 (127)
T cd04032 27 LATLTVTVLRATGLWG-------DYFTSTDGYVKVFFGG-----QEKRTEVIWNNNNPRWNATFDFGSVELSPGGKLRFE 94 (127)
T ss_pred cEEEEEEEEECCCCCc-------CcCCCCCeEEEEEECC-----ccccCceecCCCCCcCCCEEEEecccCCCCCEEEEE
Confidence 4689999999999953 2346689999999865 378999999999999999999974 34456789999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCc
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
|||+|..+++++||++.++|...-.+
T Consensus 95 V~D~d~~s~dd~IG~~~i~l~~~~~~ 120 (127)
T cd04032 95 VWDRDNGWDDDLLGTCSVVPEAGVHE 120 (127)
T ss_pred EEeCCCCCCCCeeEEEEEEecCCcee
Confidence 99999988899999999999876544
No 79
>cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family. This CD contains members of the regulator of G-protein signaling (RGS) family. RGS is a GTPase activating protein which inhibits G-protein mediated signal transduction. The protein is largely cytosolic, but G-protein activation leads to translocation of this protein to the plasma membrane. A nuclear form of this protein has also been described, but its sequence has not been identified. There are multiple alternatively spliced transcript variants in this family with some members having additional domains (ex. PDZ and RGS) downstream of the C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind pho
Probab=99.49 E-value=1e-13 Score=125.63 Aligned_cols=98 Identities=13% Similarity=0.163 Sum_probs=80.5
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc-cEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM-ALLRVEV 545 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel-a~Lrf~V 545 (602)
..|.|+|+.|++|+.. + .+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|.|.|
T Consensus 12 ~~L~V~Vi~ar~L~~~------~-~g~~dpYVkv~l~p~~~~~~~~kT~v~~~t~~P~~nE~F~f~v~~~~~~~~l~v~V 84 (119)
T cd08685 12 RKLTLHVLEAKGLRST------N-SGTCNSYVKISLSPDKEVRFRQKTSTVPDSANPLFHETFSFDVNERDYQKRLLVTV 84 (119)
T ss_pred CEEEEEEEEEECCCCC------C-CCCCCeeEEEEEEeCCCCcceEeCccccCCCCCccccEEEEEcChHHhCCEEEEEE
Confidence 4699999999999642 3 356899999999876555567799999999999999999999865443 4688999
Q ss_pred EecCCCC-CCCccEEEEEeCCCccCcc
Q 007473 546 RKYSMPE-KDEFAGQTCLPVFQLRPGI 571 (602)
Q Consensus 546 ~D~d~~~-~dd~lGq~~lpL~~L~~Gy 571 (602)
||.+... ++++||.+.||+..+..|-
T Consensus 85 ~~~~~~~~~~~~lG~~~i~l~~~~~~~ 111 (119)
T cd08685 85 WNKLSKSRDSGLLGCMSFGVKSIVNQK 111 (119)
T ss_pred ECCCCCcCCCEEEEEEEecHHHhccCc
Confidence 9988764 4789999999999986553
No 80
>cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone. The members of this CD are named after the Human KIAA0528 cDNA clone. All members here contain a single C2 repeat. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/a
Probab=99.49 E-value=9.3e-14 Score=123.81 Aligned_cols=99 Identities=17% Similarity=0.233 Sum_probs=83.0
Q ss_pred EEEEEEeccCcccCccCcCCC-CCCCCCceEEEEEecCCCCcccccccCCCCCCCCee-ccEEEEEeecCCc--cEEEEE
Q 007473 469 LKVKAYMGDGWYLDFKQMDCK-FWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVW-DDEFTFPLTIPEM--ALLRVE 544 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d-~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvW-NEtf~F~v~~pel--a~Lrf~ 544 (602)
|+|+|++|++|+.. + ..+.+||||+|.+.+ .++||++++++.||+| ||+|.|.+..+++ ..|.|.
T Consensus 1 l~V~v~~a~~L~~~------d~~~~~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~W~ne~f~f~i~~~~l~~~~l~i~ 69 (110)
T cd08688 1 LKVRVVAARDLPVM------DRSSDLTDAFVEVKFGS-----TTYKTDVVKKSLNPVWNSEWFRFEVDDEELQDEPLQIR 69 (110)
T ss_pred CEEEEEEEECCCcc------ccCCCCCCceEEEEECC-----eeEecceecCCCCCcccCcEEEEEcChHHcCCCeEEEE
Confidence 68999999999642 2 235679999999854 5789999999999999 9999999977654 589999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccC---cc---EEEEccC
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRP---GI---HAVPLFD 578 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~---Gy---R~ipL~d 578 (602)
|||++..+++++||++.+++..|.. +. +|.+|+|
T Consensus 70 V~d~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~w~~l~~ 109 (110)
T cd08688 70 VMDHDTYSANDAIGKVYIDLNPLLLKDSVSQISGWFPIYD 109 (110)
T ss_pred EEeCCCCCCCCceEEEEEeHHHhcccCCccccCCeEEccc
Confidence 9999988889999999999999865 33 5778876
No 81
>cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domai
Probab=99.49 E-value=7.1e-14 Score=128.53 Aligned_cols=113 Identities=12% Similarity=0.174 Sum_probs=88.7
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
.+.|.|+|++|++|+.. +..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+..+++ ..|.|
T Consensus 12 ~~~L~V~Vi~a~~L~~~------d~~~~~DpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~l~~~~l~~ 85 (133)
T cd08384 12 RRGLIVGIIRCVNLAAM------DANGYSDPFVKLYLKPDAGKKSKHKTQVKKKTLNPEFNEEFFYDIKHSDLAKKTLEI 85 (133)
T ss_pred CCEEEEEEEEEcCCCCc------CCCCCCCcEEEEEEEcCCCccCCceeeeEeccCCCCcccEEEEECCHHHhCCCEEEE
Confidence 45799999999999642 33466899999999865444456799999999999999999999876654 47999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCcc-EEEEccCCCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGI-HAVPLFDRKGEEL 584 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~Gy-R~ipL~d~~g~~l 584 (602)
.|||+|..+++++||++.+++.+..+.. .|..++..-++++
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~~l~~~~~~~ 127 (133)
T cd08384 86 TVWDKDIGKSNDYIGGLQLGINAKGERLRHWLDCLKNPDKKI 127 (133)
T ss_pred EEEeCCCCCCccEEEEEEEecCCCCchHHHHHHHHhCCCCCh
Confidence 9999998888999999999998754433 3345655555554
No 82
>cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins. A single C2 domain is found in Smurf proteins, C2-WW-HECT-domain E3s, which play an important role in the downregulation of the TGF-beta signaling pathway. Smurf proteins also regulate cell shape, motility, and polarity by degrading small guanosine triphosphatases (GTPases). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are
Probab=99.48 E-value=2.7e-13 Score=123.29 Aligned_cols=113 Identities=15% Similarity=0.319 Sum_probs=90.2
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|++|++|+. .+.++.+||||+|.+.| ...+||++++++.||+|||+|.|.+.. ...|.|.|||+
T Consensus 2 l~v~v~~A~~L~~------~~~~~~~dpyv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~--~~~l~i~V~d~ 69 (123)
T cd08382 2 VRLTVLCADGLAK------RDLFRLPDPFAVITVDG----GQTHSTDVAKKTLDPKWNEHFDLTVGP--SSIITIQVFDQ 69 (123)
T ss_pred eEEEEEEecCCCc------cCCCCCCCcEEEEEECC----ccceEccEEcCCCCCcccceEEEEeCC--CCEEEEEEEEC
Confidence 8999999999963 24456789999999864 356799999999999999999999854 56899999999
Q ss_pred CCCCC--CCccEEEEEeCCCccC----ccEEEEccCCCCCc--cCCeEEEEEE
Q 007473 549 SMPEK--DEFAGQTCLPVFQLRP----GIHAVPLFDRKGEE--LGSARLLMRF 593 (602)
Q Consensus 549 d~~~~--dd~lGq~~lpL~~L~~----GyR~ipL~d~~g~~--l~~asL~v~i 593 (602)
+..++ +++||++.++++.|.. +..|++|++..... ...++|.+++
T Consensus 70 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~~~~~~~~~G~v~~~~ 122 (123)
T cd08382 70 KKFKKKDQGFLGCVRIRANAVLPLKDTGYQRLDLRKLKKSDNLSVRGKIVVSL 122 (123)
T ss_pred CCCCCCCCceEeEEEEEHHHccccCCCccceeEeecCCCCCCceEeeEEEEEe
Confidence 87664 5799999999999742 37899997766532 2357777764
No 83
>cd04018 C2C_Ferlin C2 domain third repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.48 E-value=1.4e-13 Score=129.71 Aligned_cols=107 Identities=18% Similarity=0.341 Sum_probs=83.2
Q ss_pred eEEEEEEeccCcccCccCc--------CCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc-
Q 007473 468 TLKVKAYMGDGWYLDFKQM--------DCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM- 538 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~--------~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel- 538 (602)
+|.|+|+.|++|+...... -.+..+.+||||+|.+.| .+.||++++++.||+|||+|.|.+..|+.
T Consensus 1 ~~~V~V~~A~dLp~~d~~~~~~~~~~~~~~~~~~~DPYV~V~~~g-----~~~kT~v~~~t~nPvWNE~f~f~v~~p~~~ 75 (151)
T cd04018 1 RFIFKIYRAEDLPQMDSGIMANVKKAFLGEKKELVDPYVEVSFAG-----QKVKTSVKKNSYNPEWNEQIVFPEMFPPLC 75 (151)
T ss_pred CeEEEEEEeCCCCccChhhhccceeccccCCCCCcCcEEEEEECC-----EeeecceEcCCCCCCcceEEEEEeeCCCcC
Confidence 3789999999998531100 001224579999999876 35689999999999999999999877765
Q ss_pred cEEEEEEEecCCCCCCCccEEEEEeCCCccC-c---------cEEEEccCC
Q 007473 539 ALLRVEVRKYSMPEKDEFAGQTCLPVFQLRP-G---------IHAVPLFDR 579 (602)
Q Consensus 539 a~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~-G---------yR~ipL~d~ 579 (602)
..|.|+|||+|..+++++||++.+++..+.. | -+|+.|++.
T Consensus 76 ~~l~~~v~D~d~~~~dd~iG~~~l~l~~l~~~~~~~~lp~~~p~W~~lyg~ 126 (151)
T cd04018 76 ERIKIQIRDWDRVGNDDVIGTHFIDLSKISNSGDEGFLPTFGPSFVNLYGS 126 (151)
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEeHHHhccCCccccCCccCceEEEeecC
Confidence 4899999999988889999999999998743 2 266666643
No 84
>cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins. KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1
Probab=99.48 E-value=2.5e-13 Score=123.61 Aligned_cols=99 Identities=22% Similarity=0.300 Sum_probs=81.7
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
...|+|+|++|++|+.. +..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~~L~V~vi~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~~~nP~wne~f~f~i~~~~l~~~~l~i 88 (127)
T cd04030 15 RQKLIVTVHKCRNLPPC------DSSDIPDPYVRLYLLPDKSKSTRRKTSVKKDNLNPVFDETFEFPVSLEELKRRTLDV 88 (127)
T ss_pred CCEEEEEEEEEECCCCc------cCCCCCCceEEEEEEcCCCCCceEecccccCCCCCEECeEEEEecCHHHhcCCEEEE
Confidence 35699999999999642 33567899999999765544567899999999999999999999865443 57999
Q ss_pred EEEecCCC--CCCCccEEEEEeCCCccCc
Q 007473 544 EVRKYSMP--EKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 544 ~V~D~d~~--~~dd~lGq~~lpL~~L~~G 570 (602)
.|||.+.. +++++||++.++|..|..+
T Consensus 89 ~v~~~~~~~~~~~~~iG~~~i~l~~l~~~ 117 (127)
T cd04030 89 AVKNSKSFLSREKKLLGQVLIDLSDLDLS 117 (127)
T ss_pred EEEECCcccCCCCceEEEEEEeccccccc
Confidence 99998864 5799999999999998654
No 85
>cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permu
Probab=99.48 E-value=4e-13 Score=122.26 Aligned_cols=117 Identities=13% Similarity=0.204 Sum_probs=94.0
Q ss_pred eEEEEEEeccCcccCccCcCCCC--CCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKF--WSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~--~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
.|+|+|++|++|+.. +. .+.+||||+|.+.+ .+.+|++++++.||+|||+|.|.+..+....|.|.|
T Consensus 2 ~l~v~v~~a~~L~~~------~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~~P~Wne~f~~~~~~~~~~~l~i~v 70 (128)
T cd04024 2 VLRVHVVEAKDLAAK------DRSGKGKSDPYAILSVGA-----QRFKTQTIPNTLNPKWNYWCEFPIFSAQNQLLKLIL 70 (128)
T ss_pred EEEEEEEEeeCCCcc------cCCCCCCcCCeEEEEECC-----EEEecceecCCcCCccCCcEEEEecCCCCCEEEEEE
Confidence 589999999999642 23 46689999999743 567999999999999999999999875567899999
Q ss_pred EecCCCCCCCccEEEEEeCCCcc----Cc--cEEEEccCCCCC--ccCCeEEEEEEEE
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLR----PG--IHAVPLFDRKGE--ELGSARLLMRFEF 595 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~----~G--yR~ipL~d~~g~--~l~~asL~v~i~~ 595 (602)
||++..+++++||++.+++..+. .| -.+++|.+.... ....++|.+++.|
T Consensus 71 ~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~~~G~i~l~~~~ 128 (128)
T cd04024 71 WDKDRFAGKDYLGEFDIALEEVFADGKTGQSDKWITLKSTRPGKTSVVSGEIHLQFSW 128 (128)
T ss_pred EECCCCCCCCcceEEEEEHHHhhcccccCccceeEEccCcccCccccccceEEEEEEC
Confidence 99998878999999999999885 22 367888766322 3356889888865
No 86
>cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into
Probab=99.48 E-value=2.7e-13 Score=122.62 Aligned_cols=99 Identities=13% Similarity=0.191 Sum_probs=81.1
Q ss_pred ceeEEEEEEeccCcccCccCcCCC-CCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCK-FWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d-~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lr 542 (602)
.+.|+|+|++|++|+.. + ..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 13 ~~~L~V~v~~a~~L~~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~i~~~~l~~~~l~ 86 (123)
T cd08521 13 TGSLEVHIKECRNLAYA------DEKKKRSNPYVKVYLLPDKSKQSKRKTSVKKNTTNPVFNETLKYHISKSQLETRTLQ 86 (123)
T ss_pred CCEEEEEEEEecCCCCc------CCCCCCCCcEEEEEEecCCCcCceeeccccCCCCCCcccceEEEeCCHHHhCCCEEE
Confidence 35699999999999642 2 2356899999998754433356899999999999999999999876543 5799
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
|.|||++..+++++||++.++|+.+..|
T Consensus 87 i~v~d~~~~~~~~~iG~~~i~l~~l~~~ 114 (123)
T cd08521 87 LSVWHHDRFGRNTFLGEVEIPLDSWDLD 114 (123)
T ss_pred EEEEeCCCCcCCceeeEEEEeccccccc
Confidence 9999999888899999999999999654
No 87
>cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular
Probab=99.48 E-value=5e-13 Score=120.28 Aligned_cols=117 Identities=18% Similarity=0.229 Sum_probs=89.9
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
.|+|+|++|++|+...........+.+||||+|.+.+ ..++|++++++.||+|||+|.|.+..+....|.|.|||
T Consensus 2 ~l~v~v~~a~~L~~~d~~~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~t~~P~W~e~f~~~v~~~~~~~l~i~v~d 76 (121)
T cd08391 2 VLRIHVIEAQDLVAKDKFVGGLVKGKSDPYVIVRVGA-----QTFKSKVIKENLNPKWNEVYEAVVDEVPGQELEIELFD 76 (121)
T ss_pred eEEEEEEEccCCcccccccccCCCCCcCCEEEEEECC-----EeEEccccCCCCCCcccceEEEEeCCCCCCEEEEEEEe
Confidence 5899999999996421000000124689999999864 56899999999999999999999876556789999999
Q ss_pred cCCCCCCCccEEEEEeCCCccCc---cEEEEccCCCCCccCCeEEEEEEEE
Q 007473 548 YSMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 548 ~d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
++.. ++++||++.++++.+..+ -.|++|.+. ..+.|.++++|
T Consensus 77 ~~~~-~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~-----~~G~~~~~~~~ 121 (121)
T cd08391 77 EDPD-KDDFLGRLSIDLGSVEKKGFIDEWLPLEDV-----KSGRLHLKLEW 121 (121)
T ss_pred cCCC-CCCcEEEEEEEHHHhcccCccceEEECcCC-----CCceEEEEEeC
Confidence 9877 799999999999988654 267888754 34667777664
No 88
>cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synap
Probab=99.48 E-value=6.1e-13 Score=120.98 Aligned_cols=115 Identities=19% Similarity=0.276 Sum_probs=90.2
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
.|+|+|++|++|+.. +..+.+||||+|.+.+. .....||++++++.||.|||+|.|.+..+....|.|.|||
T Consensus 2 ~~~V~v~~a~~L~~~------~~~~~~Dpyv~v~~~~~--~~~~~kT~~~~~t~~P~Wne~f~f~i~~~~~~~L~i~v~d 73 (126)
T cd04043 2 LFTIRIVRAENLKAD------SSNGLSDPYVTLVDTNG--KRRIAKTRTIYDTLNPRWDEEFELEVPAGEPLWISATVWD 73 (126)
T ss_pred EEEEEEEEeECCCCC------CCCCCCCceEEEEECCC--CeeeecccEecCCCCCcccceEEEEcCCCCCCEEEEEEEE
Confidence 589999999999642 33567899999986532 1245799999999999999999999877656789999999
Q ss_pred cCCCCCCCccEEEEEeCCCccC---cc---EEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 548 YSMPEKDEFAGQTCLPVFQLRP---GI---HAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 548 ~d~~~~dd~lGq~~lpL~~L~~---Gy---R~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
++..+++++||++.++|+.+.. |. ++++|.. .+.+.+++.+..
T Consensus 74 ~d~~~~~~~iG~~~i~l~~~~~~~~~~~~~~w~~l~~-------~g~i~l~~~~~~ 122 (126)
T cd04043 74 RSFVGKHDLCGRASLKLDPKRFGDDGLPREIWLDLDT-------QGRLLLRVSMEG 122 (126)
T ss_pred CCCCCCCceEEEEEEecCHHHcCCCCCCceEEEEcCC-------CCeEEEEEEEee
Confidence 9988789999999999987642 32 5677752 357777777754
No 89
>cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-
Probab=99.48 E-value=9.2e-14 Score=128.55 Aligned_cols=112 Identities=13% Similarity=0.207 Sum_probs=86.1
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRVE 544 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf~ 544 (602)
+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 14 ~~L~V~vi~a~~L~~------~d~~g~~DPyV~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~F~f~i~~~~l~~~~l~~~ 87 (135)
T cd08410 14 GRLNVDIIRAKQLLQ------TDMSQGSDPFVKIQLVHGLKLIKTKKTSCMRGTIDPFYNESFSFKVPQEELENVSLVFT 87 (135)
T ss_pred CeEEEEEEEecCCCc------ccCCCCCCeEEEEEEEcCCcccceEcCccccCCCCCccceeEEEeCCHHHhCCCEEEEE
Confidence 569999999999964 234567899999998542222345789999999999999999999866555 369999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCc--cEEEEccCCCCCcc
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPG--IHAVPLFDRKGEEL 584 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~G--yR~ipL~d~~g~~l 584 (602)
|||+|..+++++||++.|........ -.|-.|++..++++
T Consensus 88 V~d~d~~~~~~~iG~~~l~~~~~~~~~~~~W~~l~~~~~~~~ 129 (135)
T cd08410 88 VYGHNVKSSNDFIGRIVIGQYSSGPSETNHWRRMLNSQRTAV 129 (135)
T ss_pred EEeCCCCCCCcEEEEEEEcCccCCchHHHHHHHHHhCCCCEe
Confidence 99999888899999998776555442 23445666666654
No 90
>cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 3, a member of class 3 synaptotagmins, is located in the brain and localized to the active zone and plasma membrane. It functions as a Ca2+ sensor for fast exocytosis. It, along with synaptotagmins 5,6, and 10, has disulfide bonds at its N-terminus. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and localized to the synaptic vesicles. It is thought to be a Ca2+-sensor for dense-core vesicle exocytosis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind
Probab=99.47 E-value=9.1e-14 Score=128.12 Aligned_cols=113 Identities=13% Similarity=0.147 Sum_probs=89.9
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
.+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+...++ ..|.|
T Consensus 13 ~~~L~V~v~~A~~L~~------~d~~g~~dpyvkv~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~~~~~~l~~ 86 (134)
T cd08403 13 AGRLTLTIIKARNLKA------MDITGFSDPYVKVSLMCEGRRLKKKKTSVKKNTLNPTYNEALVFDVPPENVDNVSLII 86 (134)
T ss_pred CCEEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCcccceecCCcccCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 3569999999999964 234567899999998754333456789999999999999999999864433 46999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCccEEE-EccCCCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIHAV-PLFDRKGEEL 584 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~i-pL~d~~g~~l 584 (602)
.|||++..+++++||++.+|+.....|++|+ .+....|+++
T Consensus 87 ~v~d~~~~~~~~~IG~~~l~~~~~~~~~~~w~~~~~~~~~~~ 128 (134)
T cd08403 87 AVVDYDRVGHNELIGVCRVGPNADGQGREHWNEMLANPRKPI 128 (134)
T ss_pred EEEECCCCCCCceeEEEEECCCCCCchHHHHHHHHHCCCCee
Confidence 9999998888999999999999777787654 5666666654
No 91
>cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv
Probab=99.47 E-value=2.9e-13 Score=122.91 Aligned_cols=98 Identities=20% Similarity=0.282 Sum_probs=80.9
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
.+.|+|+|++|++|+.. +..+.+||||+|.+.. ....++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 15 ~~~L~V~v~~a~~L~~~------d~~g~~dpyv~v~l~~--~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~i 86 (124)
T cd08387 15 MGILNVKLIQARNLQPR------DFSGTADPYCKVRLLP--DRSNTKQSKIHKKTLNPEFDESFVFEVPPQELPKRTLEV 86 (124)
T ss_pred CCEEEEEEEEeeCCCCC------CCCCCCCCeEEEEEec--CCCCcEeCceEcCCCCCCcccEEEEeCCHHHhCCCEEEE
Confidence 35699999999999632 3346689999999953 33456799999999999999999999875543 47999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGI 571 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~Gy 571 (602)
.|||++..+++++||++.++++.+..+-
T Consensus 87 ~V~d~~~~~~~~~iG~~~i~l~~~~~~~ 114 (124)
T cd08387 87 LLYDFDQFSRDECIGVVELPLAEVDLSE 114 (124)
T ss_pred EEEECCCCCCCceeEEEEEecccccCCC
Confidence 9999998888999999999999997553
No 92
>cd04011 C2B_Ferlin C2 domain second repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.47 E-value=3e-13 Score=120.58 Aligned_cols=98 Identities=16% Similarity=0.147 Sum_probs=81.8
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC----ccEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE----MALLR 542 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe----la~Lr 542 (602)
..|+|+|+.|++|+ .+.+||||+|.+.+ .+++|++++++.||+|||+|.|.+..+. -..|.
T Consensus 4 ~~l~V~v~~a~~L~----------~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~~~~l~ 68 (111)
T cd04011 4 FQVRVRVIEARQLV----------GGNIDPVVKVEVGG-----QKKYTSVKKGTNCPFYNEYFFFNFHESPDELFDKIIK 68 (111)
T ss_pred EEEEEEEEEcccCC----------CCCCCCEEEEEECC-----EeeeeeEEeccCCCccccEEEEecCCCHHHHhcCeEE
Confidence 46999999999984 24479999999975 4678999999999999999999986543 25799
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCcc------EEEEccCC
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGI------HAVPLFDR 579 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~Gy------R~ipL~d~ 579 (602)
|.|||++..+++++||++.++|+.+..+. +|++|.|+
T Consensus 69 i~V~d~~~~~~~~~iG~~~i~l~~v~~~~~~~~~~~w~~L~~~ 111 (111)
T cd04011 69 ISVYDSRSLRSDTLIGSFKLDVGTVYDQPDHAFLRKWLLLTDP 111 (111)
T ss_pred EEEEcCcccccCCccEEEEECCccccCCCCCcceEEEEEeeCc
Confidence 99999998888999999999999996652 46777653
No 93
>cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.46 E-value=1.2e-13 Score=127.63 Aligned_cols=113 Identities=12% Similarity=0.157 Sum_probs=88.4
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf 543 (602)
.++|+|+|++|++|+.. +..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~v~vi~a~~L~~~------~~~g~~dpyV~v~l~~~~~~~~~~kT~v~~~t~~P~wne~F~f~i~~~~~~~~~l~~ 87 (136)
T cd08405 14 ANRITVNIIKARNLKAM------DINGTSDPYVKVWLMYKDKRVEKKKTVIKKRTLNPVFNESFIFNIPLERLRETTLII 87 (136)
T ss_pred CCeEEEEEEEeeCCCcc------ccCCCCCceEEEEEEeCCCccccccCcceeCCCCCcccceEEEeCCHHHhCCCEEEE
Confidence 35699999999999632 34567899999998643333346799999999999999999999864433 57999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCccE-EEEccCCCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGIH-AVPLFDRKGEEL 584 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~GyR-~ipL~d~~g~~l 584 (602)
.|||.+..+++++||++.+++.....+.+ |..|....++++
T Consensus 88 ~v~d~~~~~~~~~lG~~~i~~~~~~~~~~~w~~~~~~~~~~~ 129 (136)
T cd08405 88 TVMDKDRLSRNDLIGKIYLGWKSGGLELKHWKDMLSKPRQPV 129 (136)
T ss_pred EEEECCCCCCCcEeEEEEECCccCCchHHHHHHHHhCCCCch
Confidence 99999988889999999999998755443 446666666654
No 94
>cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, s
Probab=99.46 E-value=3.9e-13 Score=123.94 Aligned_cols=96 Identities=21% Similarity=0.332 Sum_probs=79.9
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCC--CcccccccCCCCCCCCeeccEEEEEeecC----CccE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPA--DKKMKSTKKKVDNWTPVWDDEFTFPLTIP----EMAL 540 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~--d~~k~kTkvi~nn~nPvWNEtf~F~v~~p----ela~ 540 (602)
..|+|+|++|++|+.. +..+.+||||+|.+.+... +..++||+++++++||+|||+|.|.+... ....
T Consensus 16 ~~L~V~Vi~A~~L~~~------~~~g~~dPyv~v~l~~~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~~~~~~~~ 89 (133)
T cd04009 16 QSLRVEILNARNLLPL------DSNGSSDPFVKVELLPRHLFPDVPTPKTQVKKKTLFPLFDESFEFNVPPEQCSVEGAL 89 (133)
T ss_pred CEEEEEEEEeeCCCCc------CCCCCCCCEEEEEEECCCcCccccccccccCcCCCCCccCCEEEEEechhhcccCCCE
Confidence 4699999999999642 3346689999999975432 24578999999999999999999998652 2468
Q ss_pred EEEEEEecCCCCCCCccEEEEEeCCCcc
Q 007473 541 LRVEVRKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 541 Lrf~V~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
|.|.|||++..+++++||++.++|+.|.
T Consensus 90 l~~~V~d~d~~~~d~~iG~~~i~l~~l~ 117 (133)
T cd04009 90 LLFTVKDYDLLGSNDFEGEAFLPLNDIP 117 (133)
T ss_pred EEEEEEecCCCCCCcEeEEEEEeHHHCC
Confidence 9999999998888999999999999986
No 95
>cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence
Probab=99.46 E-value=4.4e-13 Score=122.96 Aligned_cols=95 Identities=17% Similarity=0.222 Sum_probs=76.8
Q ss_pred eeEEEEEEeccCcccCccCcCCCC-CCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEE-EeecCCc--cEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKF-WSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTF-PLTIPEM--ALLR 542 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~-~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F-~v~~pel--a~Lr 542 (602)
.+|+|+|++|++|+.. +. .+.+||||+|.+.+ .+..++||++++++.||+|||+|.| .+...++ ..|+
T Consensus 16 ~~L~V~Vi~a~~L~~~------~~~~~~~DpyV~v~l~~--~~~~~~kT~v~~~t~nP~wnE~F~f~~~~~~~~~~~~L~ 87 (128)
T cd08388 16 KALLVNIIECRDLPAM------DEQSGTSDPYVKLQLLP--EKEHKVKTRVLRKTRNPVYDETFTFYGIPYNQLQDLSLH 87 (128)
T ss_pred CEEEEEEEEeECCCCC------CCCCCCcCCEEEEEEeC--CcCceeeccEEcCCCCCceeeEEEEcccCHHHhCCCEEE
Confidence 4699999999999742 22 25679999999864 3345679999999999999999999 4443222 3699
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccC
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRP 569 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~ 569 (602)
|.|||+|..+++++||++.+||+.+..
T Consensus 88 ~~V~d~d~~~~d~~lG~~~i~L~~l~~ 114 (128)
T cd08388 88 FAVLSFDRYSRDDVIGEVVCPLAGADL 114 (128)
T ss_pred EEEEEcCCCCCCceeEEEEEeccccCC
Confidence 999999988889999999999999853
No 96
>cd04046 C2_Calpain C2 domain present in Calpain proteins. A single C2 domain is found in calpains (EC 3.4.22.52, EC 3.4.22.53), calcium-dependent, non-lysosomal cysteine proteases. Caplains are classified as belonging to Clan CA by MEROPS and include six families: C1, C2, C10, C12, C28, and C47. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of pic
Probab=99.46 E-value=1.9e-12 Score=118.31 Aligned_cols=119 Identities=16% Similarity=0.190 Sum_probs=93.1
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
..|+|+|++|++|+. .+.++.+||||+|.+.+ .+.||++++++.||+|||.|.|.+..+ -..|.|.||
T Consensus 3 ~~~~V~v~~A~~L~~------~d~~g~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~i~V~ 70 (126)
T cd04046 3 VVTQVHVHSAEGLSK------QDSGGGADPYVIIKCEG-----ESVRSPVQKDTLSPEFDTQAIFYRKKP-RSPIKIQVW 70 (126)
T ss_pred EEEEEEEEeCcCCCC------CCCCCCcCccEEEEECC-----EEEEeCccCCCCCCcccceEEEEecCC-CCEEEEEEE
Confidence 358999999999853 23457789999998765 467999999999999999999987654 457999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccC-ccEEEEccCCCC--CccCCeEEEEEEEEEEc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRP-GIHAVPLFDRKG--EELGSARLLMRFEFYEA 598 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~-GyR~ipL~d~~g--~~l~~asL~v~i~~~e~ 598 (602)
|++... +++||.+.++++.+.. .+++++|..... .-...|+|.+++...++
T Consensus 71 d~~~~~-d~~lG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~G~i~~~~~~~~~ 124 (126)
T cd04046 71 NSNLLC-DEFLGQATLSADPNDSQTLRTLPLRKRGRDAAGEVPGTISVKVTSSDD 124 (126)
T ss_pred ECCCCC-CCceEEEEEecccCCCcCceEEEcccCCCCCCCCCCCEEEEEEEEccc
Confidence 998765 8999999999987654 478899953221 12234788888877653
No 97
>cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.46 E-value=9.7e-13 Score=121.62 Aligned_cols=117 Identities=22% Similarity=0.378 Sum_probs=91.4
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeec-C--------Cc
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTI-P--------EM 538 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~-p--------el 538 (602)
.|+|+|++|++|+.. +..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+.. + +-
T Consensus 2 ~l~v~V~~a~~L~~~------d~~g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~~~f~~~~~~~~~~~~~~~~ 70 (135)
T cd04017 2 QLRAYIYQARDLLAA------DKSGLSDPFARVSFLN-----QSQETEVIKETLSPTWDQTLIFDEVELYGSPEEIAQNP 70 (135)
T ss_pred EEEEEEEEeecCcCC------CCCCCCCCEEEEEECC-----eeeEeeeEcCCCCCccCcEEEEeeeeccCChHHhhcCC
Confidence 489999999999642 4456789999999864 47799999999999999999997532 1 12
Q ss_pred cEEEEEEEecCCCCCCCccEEEEE-eCCCccC------ccEEEEccCCCCCccCCeEEEEEEEEEEc
Q 007473 539 ALLRVEVRKYSMPEKDEFAGQTCL-PVFQLRP------GIHAVPLFDRKGEELGSARLLMRFEFYEA 598 (602)
Q Consensus 539 a~Lrf~V~D~d~~~~dd~lGq~~l-pL~~L~~------GyR~ipL~d~~g~~l~~asL~v~i~~~e~ 598 (602)
..|.|.|||+|..+++++||++.+ |+..++. --+|++|... |. ..|.|+|.|++.++
T Consensus 71 ~~l~v~V~d~d~~~~d~~iG~~~i~~~~~~~~~~~~~~~~~W~~L~~~-~~--~~Geil~~~~~~~~ 134 (135)
T cd04017 71 PLVVVELFDQDSVGKDEFLGRSVAKPLVKLDLEEDFPPKLQWFPIYKG-GQ--SAGELLAAFELIEV 134 (135)
T ss_pred CEEEEEEEeCcCCCCCccceEEEeeeeeecccCCCCCCCceEEEeecC-CC--chhheeEEeEEEEe
Confidence 469999999998888999999986 6555542 2378888733 32 45899999999875
No 98
>cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrev
Probab=99.45 E-value=8.6e-13 Score=120.70 Aligned_cols=114 Identities=22% Similarity=0.295 Sum_probs=90.6
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
+|+|+|++|++|+.. +..+.+||||+|.+.+ .+.+|+++.++.||.|||+|.|.+..+ ...|.|.|||
T Consensus 2 ~L~V~vi~a~~L~~~------d~~g~~DPyv~v~~~~-----~~~kT~~v~~t~~P~Wne~f~f~~~~~-~~~l~i~v~d 69 (127)
T cd04027 2 KISITVVCAQGLIAK------DKTGTSDPYVTVQVGK-----TKKRTKTIPQNLNPVWNEKFHFECHNS-SDRIKVRVWD 69 (127)
T ss_pred eEEEEEEECcCCcCC------CCCCCcCcEEEEEECC-----EeeecceecCCCCCccceEEEEEecCC-CCEEEEEEEE
Confidence 589999999999642 3456689999999843 467999999999999999999988655 3579999999
Q ss_pred cCCC-----------CCCCccEEEEEeCCCccCcc-EEEEccCCCCCccCCeEEEEEE
Q 007473 548 YSMP-----------EKDEFAGQTCLPVFQLRPGI-HAVPLFDRKGEELGSARLLMRF 593 (602)
Q Consensus 548 ~d~~-----------~~dd~lGq~~lpL~~L~~Gy-R~ipL~d~~g~~l~~asL~v~i 593 (602)
+|.. +.+++||++.+++..+..+- .|.+|....+.....+.|.+++
T Consensus 70 ~d~~~~~~~~~~~~~~~~~~iG~~~i~l~~~~~~~~~w~~L~~~~~~~~~~G~i~~~~ 127 (127)
T cd04027 70 EDDDIKSRLKQKFTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHI 127 (127)
T ss_pred CCCCcccccceeccccCCCcceEEEEEhHHccCCCCeEEECccCCCCCcEeEEEEEEC
Confidence 9852 46899999999999886554 5678876666655577888764
No 99
>cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1). Freud-1 is a novel calcium-regulated repressor that negatively regulates basal 5-HT1A receptor expression in neurons. It may also play a role in the altered regulation of 5-HT1A receptors associated with anxiety or major depression. Freud-1 contains two DM-14 basic repeats, a helix-loop-helix DNA binding domain, and a C2 domain. The Freud-1 C2 domain is thought to be calcium insensitive and it lacks several acidic residues that mediate calcium binding of the PKC C2 domain. In addition, it contains a poly-basic insert that is not present in calcium-dependent C2 domains and may function as a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules tha
Probab=99.45 E-value=1.4e-12 Score=123.17 Aligned_cols=123 Identities=15% Similarity=0.160 Sum_probs=91.2
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC--------ccE
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE--------MAL 540 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe--------la~ 540 (602)
..++|..+.+++++ ..+..+.+||||++++.-......+.||++++++.||+|||+|.|.|.... -..
T Consensus 4 ~el~i~~~~~~~l~----~~~~~~~~DpYVk~~l~~p~~~~~k~KT~v~k~TlnPvfNE~f~f~I~~~~~~~~R~l~~~~ 79 (155)
T cd08690 4 IELTIVRCIGIPLP----SGWNPKDLDTYVKFEFPYPNEEPQSGKTSTIKDTNSPEYNESFKLNINRKHRSFQRVFKRHG 79 (155)
T ss_pred eEEEEEEeeccccC----CCcCCCCCCeEEEEEEecCCCCCceeecCcccCCCCCcccceEEEEeccccchhhhhccCCc
Confidence 34556666654332 122334579999999743234456889999999999999999999986442 135
Q ss_pred EEEEEEecCCC-CCCCccEEEEEeCCCccCc---cEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 541 LRVEVRKYSMP-EKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 541 Lrf~V~D~d~~-~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
|.|.|||++.+ .+|++||++.++|+.+..+ -.+++|++ |....+|.|-|+|.+.+
T Consensus 80 L~~~V~d~~~f~~~D~~iG~~~i~L~~l~~~~~~~~~~~L~~--~~k~~Gg~l~v~ir~r~ 138 (155)
T cd08690 80 LKFEVYHKGGFLRSDKLLGTAQVKLEPLETKCEIHESVDLMD--GRKATGGKLEVKVRLRE 138 (155)
T ss_pred EEEEEEeCCCcccCCCeeEEEEEEcccccccCcceEEEEhhh--CCCCcCCEEEEEEEecC
Confidence 99999999875 4699999999999999544 34678885 66667899999988754
No 100
>cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4. Rasal1 and RasA4 are both members of GAP1 (GTPase activating protein 1). Rasal1 responds to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. RasA4 suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both of these proteins contains two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins.
Probab=99.45 E-value=7e-13 Score=120.24 Aligned_cols=115 Identities=14% Similarity=0.172 Sum_probs=89.2
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|.|+|+.|++|+.. +..+..||||+|.+.+ ....||+++.++.||+|||.|.|.+... ...|.|.|||+
T Consensus 2 l~v~vi~a~~L~~~------d~~g~~DPYv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~~-~~~l~v~v~d~ 70 (121)
T cd04054 2 LYIRIVEGKNLPAK------DITGSSDPYCIVKVDN----EVIIRTATVWKTLNPFWGEEYTVHLPPG-FHTVSFYVLDE 70 (121)
T ss_pred EEEEEEEeeCCcCC------CCCCCCCceEEEEECC----EeeeeeeeEcCCCCCcccceEEEeeCCC-CCEEEEEEEEC
Confidence 78999999999642 3456689999999864 2346999999999999999999998543 46899999999
Q ss_pred CCCCCCCccEEEEEeCCCccCc----cEEEEccCCCCCccCCeEEEEEEE
Q 007473 549 SMPEKDEFAGQTCLPVFQLRPG----IHAVPLFDRKGEELGSARLLMRFE 594 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~G----yR~ipL~d~~g~~l~~asL~v~i~ 594 (602)
+..+++++||++.+++..+..+ -.|++|....+..-..+.|.+.++
T Consensus 71 ~~~~~d~~iG~~~~~~~~~~~~~~~~~~W~~L~~~~~~~~~~G~i~l~~~ 120 (121)
T cd04054 71 DTLSRDDVIGKVSLTREVISAHPRGIDGWMNLTEVDPDEEVQGEIHLELS 120 (121)
T ss_pred CCCCCCCEEEEEEEcHHHhccCCCCCCcEEECeeeCCCCccccEEEEEEE
Confidence 9888899999999998877643 368898653322223467776654
No 101
>cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins. SRC2 production is a response to pathogen infiltration. The initial response of increased Ca2+ concentrations are coupled to downstream signal transduction pathways via calcium binding proteins. SRC2 contains a single C2 domain which localizes to the plasma membrane and is involved in Ca2+ dependent protein binding. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such
Probab=99.44 E-value=4.2e-13 Score=122.00 Aligned_cols=107 Identities=21% Similarity=0.279 Sum_probs=87.9
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCC-CCCCeeccEEEEEeecCC----ccEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVD-NWTPVWDDEFTFPLTIPE----MALLR 542 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~n-n~nPvWNEtf~F~v~~pe----la~Lr 542 (602)
+|+|+|++|++|+.. +..+.+||||+|.+.+ ..+++|+++.+ +.||+|||+|.|.+..++ ...|.
T Consensus 1 ~L~V~V~sA~~L~~~------~~~~~~dpYv~v~~~~----~~~~~T~~~~~~~~~P~Wne~f~f~v~~~~~~~~~~~l~ 70 (125)
T cd04051 1 TLEITIISAEDLKNV------NLFGKMKVYAVVWIDP----SHKQSTPVDRDGGTNPTWNETLRFPLDERLLQQGRLALT 70 (125)
T ss_pred CEEEEEEEcccCCCC------CcccCCceEEEEEECC----CcccccccccCCCCCCCCCCEEEEEcChHhcccCccEEE
Confidence 489999999999642 3346689999999975 24678998764 689999999999998775 47899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCcc--------EEEEccCCCCCcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGI--------HAVPLFDRKGEEL 584 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~Gy--------R~ipL~d~~g~~l 584 (602)
|.|||++..+++++||++.+|+..+..+. .+.+|.+..|++-
T Consensus 71 ~~v~d~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~~~~~l~~~~g~~~ 120 (125)
T cd04051 71 IEVYCERPSLGDKLIGEVRVPLKDLLDGASPAGELRFLSYQLRRPSGKPQ 120 (125)
T ss_pred EEEEECCCCCCCCcEEEEEEEHHHhhcccCCCCcceeEEEEeECCCCCcC
Confidence 99999988777999999999999987654 3578888888764
No 102
>cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3. RasA2 and RasA3 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA2 and RasA3 are both inositol 1,3,4,5-tetrakisphosphate-binding proteins and contain an N-terminal C2 domain, a Ras-GAP domain, a pleckstrin-homology (PH) domain which localizes it to the plasma membrane, and Bruton's Tyrosine Kinase (BTK) a zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular p
Probab=99.44 E-value=1.3e-12 Score=118.72 Aligned_cols=116 Identities=14% Similarity=0.157 Sum_probs=88.1
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|+.|.+|+.. . +..+.+||||.|.+.+ ....||++++++.||+|||+|.|.+... ...|.|.|||+
T Consensus 2 l~v~v~~a~~L~~~----~-~~~g~sDpYv~v~l~~----~~~~kT~v~~kt~~P~WnE~F~f~v~~~-~~~l~~~v~d~ 71 (121)
T cd08401 2 LKIKIGEAKNLPPR----S-GPNKMRDCYCTVNLDQ----EEVFRTKTVEKSLCPFFGEDFYFEIPRT-FRHLSFYIYDR 71 (121)
T ss_pred eEEEEEEccCCCCC----C-CCCCCcCcEEEEEECC----ccEEEeeEEECCCCCccCCeEEEEcCCC-CCEEEEEEEEC
Confidence 78999999999642 1 1134679999999843 2357899999999999999999998643 36899999999
Q ss_pred CCCCCCCccEEEEEeCCCccCc---cEEEEccCCCCCccCCeEEEEEEE
Q 007473 549 SMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEELGSARLLMRFE 594 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~l~~asL~v~i~ 594 (602)
+..+++++||.+.++++.+..| -.|++|.-.....-..|.|.+.+.
T Consensus 72 ~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~ 120 (121)
T cd08401 72 DVLRRDSVIGKVAIKKEDLHKYYGKDTWFPLQPVDADSEVQGKVHLELR 120 (121)
T ss_pred CCCCCCceEEEEEEEHHHccCCCCcEeeEEEEccCCCCcccEEEEEEEE
Confidence 9888899999999999999644 357777632211113577776654
No 103
>cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family. SynGAP, GAP1, RasGAP, and neurofibromin are all members of the Ras-specific GAP (GTPase-activating protein) family. SynGAP regulates the MAP kinase signaling pathway and is critical for cognition and synapse function. Mutations in this gene causes mental retardation in humans. SynGAP contains a PH-like domain, a C2 domain, and a Ras-GAP domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at leas
Probab=99.44 E-value=1.2e-12 Score=122.45 Aligned_cols=121 Identities=20% Similarity=0.334 Sum_probs=99.9
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
...|.|.|+.|++||.. .++||+|.+.| ....||+++.++.||.|+|.|.|....+ ..-|.|.|
T Consensus 10 ~~sL~v~V~EAk~Lp~~-----------~~~Y~~i~Ld~----~~vaRT~v~~~~~nP~W~E~F~f~~~~~-~~~l~v~v 73 (146)
T cd04013 10 ENSLKLWIIEAKGLPPK-----------KRYYCELCLDK----TLYARTTSKLKTDTLFWGEHFEFSNLPP-VSVITVNL 73 (146)
T ss_pred EEEEEEEEEEccCCCCc-----------CCceEEEEECC----EEEEEEEEEcCCCCCcceeeEEecCCCc-ccEEEEEE
Confidence 35699999999999741 27899999987 2335999999999999999999975443 45689999
Q ss_pred EecCC-CC---CCCccEEEEEeCCCccCc---cEEEEccCCCCCc--------cCCeEEEEEEEEEEccccC
Q 007473 546 RKYSM-PE---KDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEE--------LGSARLLMRFEFYEADVLP 602 (602)
Q Consensus 546 ~D~d~-~~---~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~--------l~~asL~v~i~~~e~~~~~ 602 (602)
+..+. .+ ++++||.+.||+..+..| -+|.||.+.+|.+ -.+++|.|++.|..+.|+|
T Consensus 74 ~k~~~~~~~~~~~~~IG~V~Ip~~~l~~~~~ve~Wfpl~~~~~~~~~~~~~~~~~~~~lrik~rf~~~~~lP 145 (146)
T cd04013 74 YRESDKKKKKDKSQLIGTVNIPVTDVSSRQFVEKWYPVSTPKGNGKSGGKEGKGESPSIRIKARYQSTRVLP 145 (146)
T ss_pred EEccCccccccCCcEEEEEEEEHHHhcCCCcccEEEEeecCCCCCccccccccCCCCEEEEEEEEEEeeeCC
Confidence 75442 21 478999999999999887 4799999999886 5678999999999999998
No 104
>cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon. A single C2 domain is found in PKC epsilon. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1 (alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that
Probab=99.43 E-value=1.4e-12 Score=119.83 Aligned_cols=118 Identities=19% Similarity=0.157 Sum_probs=90.6
Q ss_pred eeEEEEEEeccCcccCccCcC--C--CCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMD--C--KFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLR 542 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~--~--d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lr 542 (602)
+.|+|+|+.|++|+....... . ...+..||||+|.+.+ ....+|++++++.||+|||+|+|.+. +.+.|.
T Consensus 4 g~l~V~v~~a~~L~~~d~~~~~~~~~~~~g~~dpyv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~--~~~~l~ 77 (132)
T cd04014 4 GTLKIKICEAVDLKPTDWSTRHAVPKKGSQLLDPYVSIDVDD----THIGKTSTKPKTNSPVWNEEFTTEVH--NGRNLE 77 (132)
T ss_pred eEEEEEEEEecCCCCCCchhhhcccccCccCcCcEEEEEECC----EEEeEEeEcCCCCCCCcceeEEEEcC--CCCEEE
Confidence 569999999999963210000 0 0124579999999864 23468999889999999999999986 457899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccC-----ccEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRP-----GIHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~-----GyR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
|.|+|++..+.+++||++.++|+.+.. +-.|++|. +.+.|.|++.+.-
T Consensus 78 ~~v~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~w~~L~-------~~G~l~l~~~~~~ 130 (132)
T cd04014 78 LTVFHDAAIGPDDFVANCTISFEDLIQRGSGSFDLWVDLE-------PQGKLHVKIELKG 130 (132)
T ss_pred EEEEeCCCCCCCceEEEEEEEhHHhcccCCCcccEEEEcc-------CCcEEEEEEEEec
Confidence 999999887789999999999998876 25778885 3468888888763
No 105
>cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin
Probab=99.42 E-value=9.2e-13 Score=125.79 Aligned_cols=97 Identities=16% Similarity=0.175 Sum_probs=80.2
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecC-Cc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIP-EM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~p-el--a~Lr 542 (602)
.+.|.|+|++|.+|+.. +..+.+||||+|.+........++||++++++.||+|||+|.|.+..+ ++ ..|.
T Consensus 26 ~g~L~V~Vi~A~nL~~~------d~~g~~DPYVkv~l~~~~~~~~~~kT~vi~~t~nP~WnE~f~f~~~~~~~l~~~~L~ 99 (162)
T cd04020 26 TGELHVWVKEAKNLPAL------KSGGTSDSFVKCYLLPDKSKKSKQKTPVVKKSVNPVWNHTFVYDGVSPEDLSQACLE 99 (162)
T ss_pred CceEEEEEEeeeCCCCC------CCCCCCCCEEEEEEEcCCCCCcceeCCccCCCCCCCCCCEEEEecCCHHHhCCCEEE
Confidence 46799999999999742 334668999999997544445678999999999999999999985432 23 4799
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
|.|||++..+++++||++.++++.+.
T Consensus 100 i~V~d~d~~~~d~~lG~v~i~l~~~~ 125 (162)
T cd04020 100 LTVWDHDKLSSNDFLGGVRLGLGTGK 125 (162)
T ss_pred EEEEeCCCCCCCceEEEEEEeCCccc
Confidence 99999998888999999999999874
No 106
>cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.42 E-value=9.5e-13 Score=120.03 Aligned_cols=101 Identities=19% Similarity=0.209 Sum_probs=80.3
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEE-eecCC--ccEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFP-LTIPE--MALLRV 543 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~-v~~pe--la~Lrf 543 (602)
..|+|+|+.|++|+.. +..+..||||++.+.+. ...++||+++++ .||+|||+|.|. +...+ ...|+|
T Consensus 16 ~~L~V~Vi~a~nL~~~------~~~~~~d~yVk~~llp~--~~~~~kTkv~~~-~nP~fnE~F~f~~i~~~~l~~~~L~~ 86 (124)
T cd08389 16 RKLTVTVIRAQDIPTK------DRGGASSWQVHLVLLPS--KKQRAKTKVQRG-PNPVFNETFTFSRVEPEELNNMALRF 86 (124)
T ss_pred CEEEEEEEEecCCCch------hcCCCCCcEEEEEEccC--CcceeecccccC-CCCcccCEEEECCCCHHHhccCEEEE
Confidence 5699999999999642 23455799999887653 346789999887 999999999998 55433 357999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCcc---EEEEc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPL 576 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL 576 (602)
.|+|++..+++++||++.+||+.+..+- .|++|
T Consensus 87 ~V~~~~~~~~~~~lG~~~i~L~~l~~~~~~~~w~~L 122 (124)
T cd08389 87 RLYGVERMRKERLIGEKVVPLSQLNLEGETTVWLTL 122 (124)
T ss_pred EEEECCCcccCceEEEEEEeccccCCCCCceEEEeC
Confidence 9999998888999999999999997653 34454
No 107
>cd04048 C2A_Copine C2 domain first repeat in Copine. There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 doma
Probab=99.42 E-value=8.5e-13 Score=119.34 Aligned_cols=103 Identities=17% Similarity=0.140 Sum_probs=82.1
Q ss_pred EEeccCcccCccCcCCCCCCCCCceEEEEEecCC--CCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCC
Q 007473 473 AYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVP--ADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSM 550 (602)
Q Consensus 473 Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p--~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~ 550 (602)
.++|++|+. .+..+.+||||+|.+.+.. .....+||++++++.||+|||+|.|.+..++...|+|.|||+|.
T Consensus 6 ~i~a~~L~~------~d~~g~~DPyv~v~~~~~~~~~~~~~~kT~vi~~t~nP~wne~f~f~~~~~~~~~l~~~V~d~d~ 79 (120)
T cd04048 6 SISCRNLLD------KDVLSKSDPFVVVYVKTGGSGQWVEIGRTEVIKNNLNPDFVTTFTVDYYFEEVQKLRFEVYDVDS 79 (120)
T ss_pred EEEccCCCC------CCCCCCCCcEEEEEEEcCCCCceEEeccEeEeCCCCCCCceEEEEEEEEeEeeeEEEEEEEEecC
Confidence 478888863 2345678999999998754 23346799999999999999999999777777789999999997
Q ss_pred ----CCCCCccEEEEEeCCCccCc---cEEEEccCCCC
Q 007473 551 ----PEKDEFAGQTCLPVFQLRPG---IHAVPLFDRKG 581 (602)
Q Consensus 551 ----~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g 581 (602)
.+++++||++.++++.|..+ ..+++|.+..+
T Consensus 80 ~~~~~~~~d~iG~~~i~l~~l~~~~~~~~~~~l~~~~~ 117 (120)
T cd04048 80 KSKDLSDHDFLGEAECTLGEIVSSPGQKLTLPLKGGKG 117 (120)
T ss_pred CcCCCCCCcEEEEEEEEHHHHhcCCCcEEEEEccCCCc
Confidence 67899999999999999754 24567744443
No 108
>cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 id
Probab=99.41 E-value=7.1e-13 Score=123.02 Aligned_cols=97 Identities=21% Similarity=0.254 Sum_probs=79.0
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRVE 544 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf~ 544 (602)
.+|+|+|+.|++|+.. + .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 15 ~~L~V~V~~a~nL~~~------~-~~~~d~yVkv~l~~~~~~~~~~kT~v~~~~~nP~fnE~F~f~i~~~~l~~~~L~~~ 87 (137)
T cd08409 15 NRLTVVVLRARGLRQL------D-HAHTSVYVKVSLMIHNKVVKTKKTEVVDGAASPSFNESFSFKVTSRQLDTASLSLS 87 (137)
T ss_pred CeEEEEEEEecCCCcc------c-CCCCCeEEEEEEEECCEEeeeeecccEeCCCCCcccceEEEECCHHHhCccEEEEE
Confidence 5699999999999642 3 456899999999864433346799999999999999999999865444 589999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCc
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
||+.+...++++||++.++......|
T Consensus 88 V~~~~~~~~~~~lG~v~ig~~~~~~~ 113 (137)
T cd08409 88 VMQSGGVRKSKLLGRVVLGPFMYARG 113 (137)
T ss_pred EEeCCCCCCcceEEEEEECCcccCCC
Confidence 99999888899999999997655443
No 109
>cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma. A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transd
Probab=99.41 E-value=1.3e-12 Score=119.80 Aligned_cols=108 Identities=19% Similarity=0.286 Sum_probs=88.7
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC-ccEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE-MALLRVEV 545 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe-la~Lrf~V 545 (602)
..|+|+|++|++|+.. +..+..||||+|.+.+.+.+..+++|+++.++.||.|||+|.|.+..++ ...|+|.|
T Consensus 13 ~~l~v~i~~a~nL~~~------~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~wne~f~~~~~~~~~~~~l~v~v 86 (131)
T cd04026 13 NKLTVEVREAKNLIPM------DPNGLSDPYVKLKLIPDPKNETKQKTKTIKKTLNPVWNETFTFDLKPADKDRRLSIEV 86 (131)
T ss_pred CEEEEEEEEeeCCCCc------CCCCCCCCcEEEEEEcCCCCCceecceeecCCCCCCccceEEEeCCchhcCCEEEEEE
Confidence 4699999999999642 2235689999999987666667889999999999999999999987654 35799999
Q ss_pred EecCCCCCCCccEEEEEeCCCccCc--cEEEEccCCC
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRPG--IHAVPLFDRK 580 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~G--yR~ipL~d~~ 580 (602)
||++..+++++||++.++++.+..+ -.|.+|.+..
T Consensus 87 ~d~~~~~~~~~iG~~~~~l~~l~~~~~~~w~~L~~~~ 123 (131)
T cd04026 87 WDWDRTTRNDFMGSLSFGVSELIKMPVDGWYKLLNQE 123 (131)
T ss_pred EECCCCCCcceeEEEEEeHHHhCcCccCceEECcCcc
Confidence 9999877899999999999988643 4577887644
No 110
>cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.41 E-value=2.1e-12 Score=116.78 Aligned_cols=119 Identities=18% Similarity=0.246 Sum_probs=92.0
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
+.|+|+|++|++|+.. . ...+.+||||+|.+.+. ....+|+++.++.||.|||+|.|.+. +....|.|.||
T Consensus 2 g~l~v~v~~a~~L~~~--~---~~~~~~dpyv~v~~~~~---~~~~kT~~~~~~~~P~Wne~~~~~v~-~~~~~l~~~v~ 72 (124)
T cd04044 2 GVLAVTIKSARGLKGS--D---IIGGTVDPYVTFSISNR---RELARTKVKKDTSNPVWNETKYILVN-SLTEPLNLTVY 72 (124)
T ss_pred eEEEEEEEcccCCCcc--c---ccCCCCCCeEEEEECCC---CcceEeeeecCCCCCcceEEEEEEeC-CCCCEEEEEEE
Confidence 4699999999999631 0 11245799999999752 35679999999999999999999987 44568999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCccEE---EEccCCCCCccCCeEEEEEEEEE
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPGIHA---VPLFDRKGEELGSARLLMRFEFY 596 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~GyR~---ipL~d~~g~~l~~asL~v~i~~~ 596 (602)
|++..+++++||++.+++..+..+..+ ..+....|++ .++|.|.++|.
T Consensus 73 d~~~~~~d~~iG~~~~~l~~l~~~~~~~~~~~~~~~~~k~--~G~i~~~l~~~ 123 (124)
T cd04044 73 DFNDKRKDKLIGTAEFDLSSLLQNPEQENLTKNLLRNGKP--VGELNYDLRFF 123 (124)
T ss_pred ecCCCCCCceeEEEEEEHHHhccCccccCcchhhhcCCcc--ceEEEEEEEeC
Confidence 999887899999999999998765332 2333455554 47888888875
No 111
>cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.41 E-value=1.6e-12 Score=118.12 Aligned_cols=97 Identities=20% Similarity=0.277 Sum_probs=78.8
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecC---CccEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIP---EMALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~p---ela~Lr 542 (602)
...|+|+|++|++|+.. +..+..||||+|.+.+ .+..+.+|++++++.||+|||+|.|.+... ....|+
T Consensus 15 ~~~L~v~v~~a~~L~~~------d~~~~~dpyv~v~~~~--~~~~~~kT~v~~~t~~P~Wne~f~f~~~~~~~l~~~~l~ 86 (125)
T cd08386 15 ESTLTLKILKAVELPAK------DFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHWNETFLFEGFPYEKLQQRVLY 86 (125)
T ss_pred CCEEEEEEEEecCCCCc------cCCCCCCceEEEEECC--CCCcceeeeeecCCCCCccceeEEEcccCHHHhCCCEEE
Confidence 35699999999999642 3345689999999853 234567999999999999999999975321 235799
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
|.|||+|..+++++||++.++++.+..|
T Consensus 87 ~~v~d~d~~~~~~~iG~~~i~l~~l~~~ 114 (125)
T cd08386 87 LQVLDYDRFSRNDPIGEVSLPLNKVDLT 114 (125)
T ss_pred EEEEeCCCCcCCcEeeEEEEecccccCC
Confidence 9999999888899999999999998765
No 112
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=99.41 E-value=2.8e-13 Score=114.73 Aligned_cols=75 Identities=31% Similarity=0.516 Sum_probs=64.7
Q ss_pred hHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCCCCCCCC
Q 007473 27 DVKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFSTDLNPPL 105 (602)
Q Consensus 27 el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~~~n~~~ 105 (602)
||..||.+|++++..||+++|++||+++|++..++.++|.+||.+|++... ...+..||++||++||+|+ .|.++
T Consensus 1 ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~---~~~~~~lt~~gF~~fL~S~-~N~~~ 75 (83)
T PF09279_consen 1 EIEEIFRKYSSDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDER---NRQKGQLTLEGFTRFLFSD-ENSIF 75 (83)
T ss_dssp HHHHHHHHHCTTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHH---HHCTTEEEHHHHHHHHHST-TCBSS
T ss_pred CHHHHHHHHhCCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchh---hcccCCcCHHHHHHHHCCC-cCCCC
Confidence 799999999998899999999999999999988899999999999985431 1245789999999999996 57766
No 113
>cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distin
Probab=99.41 E-value=4.9e-13 Score=122.55 Aligned_cols=112 Identities=16% Similarity=0.143 Sum_probs=90.2
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC--ccEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE--MALLRVE 544 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe--la~Lrf~ 544 (602)
++|.|+|++|++|+.. +..+.+||||+|.+.+......+++|+++.++.||.|||+|.|.+..+. ...|+|.
T Consensus 14 ~~L~V~v~~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~~~~P~wne~f~f~i~~~~l~~~~l~~~ 87 (134)
T cd00276 14 ERLTVVVLKARNLPPS------DGKGLSDPYVKVSLLQGGKKLKKKKTSVKKGTLNPVFNEAFSFDVPAEQLEEVSLVIT 87 (134)
T ss_pred CEEEEEEEEeeCCCCc------cCCCCCCcEEEEEEEcCCeEeeeecCcceecCCCCeeeeeEEEECCHHHhCCcEEEEE
Confidence 5699999999999642 2346689999999987544445679999999999999999999987654 3689999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCccE-EEEccCCCCCcc
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPGIH-AVPLFDRKGEEL 584 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~GyR-~ipL~d~~g~~l 584 (602)
|||.+..+++++||++.++++....+.. |.+|.+..|+++
T Consensus 88 v~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~ 128 (134)
T cd00276 88 VVDKDSVGRNEVIGQVVLGPDSGGEELEHWNEMLASPRKPI 128 (134)
T ss_pred EEecCCCCCCceeEEEEECCCCCCcHHHHHHHHHhCCCCce
Confidence 9999987789999999999999444443 457887767764
No 114
>cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat
Probab=99.40 E-value=1.6e-12 Score=117.70 Aligned_cols=103 Identities=17% Similarity=0.187 Sum_probs=82.8
Q ss_pred ceeEEEEEEeccCcccCccCcCCC-CCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCK-FWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d-~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lr 542 (602)
...|+|+|++|++|+.. + ..+.+||||+|.+.+ .+...++|++++++.||+|||+|.|.+...++ ..|+
T Consensus 13 ~~~L~V~v~~a~~L~~~------~~~~~~~dpyV~v~l~~--~~~~~~~T~v~~~~~~P~wne~f~f~i~~~~l~~~~l~ 84 (123)
T cd08390 13 EEQLTVSLIKARNLPPR------TKDVAHCDPFVKVCLLP--DERRSLQSKVKRKTQNPNFDETFVFQVSFKELQRRTLR 84 (123)
T ss_pred CCEEEEEEEEecCCCCc------cCCCCCCCcEEEEEEee--CCCCceEeeeEcCCCCCccceEEEEEcCHHHhcccEEE
Confidence 35699999999999642 2 345689999999863 23346789999999999999999999876544 4799
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCcc---EEEEc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPL 576 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL 576 (602)
|.|||.+..+++++||++.++|+.+.... .|+||
T Consensus 85 i~v~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~w~~L 121 (123)
T cd08390 85 LSVYDVDRFSRHCIIGHVLFPLKDLDLVKGGVVWRDL 121 (123)
T ss_pred EEEEECCcCCCCcEEEEEEEeccceecCCCceEEEeC
Confidence 99999998778999999999999987654 45565
No 115
>cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.39 E-value=1.4e-12 Score=121.22 Aligned_cols=113 Identities=14% Similarity=0.191 Sum_probs=86.9
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCC-cccccccCCCCCCCCeeccEEEEEeecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPAD-KKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d-~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lr 542 (602)
..+|.|+|+.|.+|+.. +..+.+||||+|.+.+.... ..++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 14 ~~~L~V~VikarnL~~~------~~~~~~dpyVkv~llp~~~~~~~~~kT~v~~~t~nPvfnEtF~f~i~~~~l~~~~L~ 87 (138)
T cd08408 14 TGRLSVEVIKGSNFKNL------AMNKAPDTYVKLTLLNSDGQEISKSKTSIRRGQPDPEFKETFVFQVALFQLSEVTLM 87 (138)
T ss_pred CCeEEEEEEEecCCCcc------ccCCCCCeeEEEEEEeCCCcceeeccceeecCCCCCcEeeeEEEECCHHHhCccEEE
Confidence 35699999999999642 34456899999999753222 246799999999999999999999876554 5899
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccC-ccE-EEEccCCCCCcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRP-GIH-AVPLFDRKGEEL 584 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~-GyR-~ipL~d~~g~~l 584 (602)
|.|||.+..+++++||++.+++..... +.. |..+....++++
T Consensus 88 ~~V~~~~~~~~~~~iG~v~l~~~~~~~~~~~hW~~~l~~~~~~v 131 (138)
T cd08408 88 FSVYNKRKMKRKEMIGWFSLGLNSSGEEEEEHWNEMKESKGQQV 131 (138)
T ss_pred EEEEECCCCCCCcEEEEEEECCcCCCchHHHHHHHHHhCCCCEE
Confidence 999999988889999999999987654 333 334555555543
No 116
>cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.39 E-value=1.8e-12 Score=117.56 Aligned_cols=99 Identities=17% Similarity=0.246 Sum_probs=80.6
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEE-eecCCc--cEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFP-LTIPEM--ALLR 542 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~-v~~pel--a~Lr 542 (602)
..+|+|+|++|++|+.. +..+.+||||+|.+.+...+..+.||++++++.||+|||+|.|. +...++ ..|.
T Consensus 14 ~~~L~V~v~~a~~L~~~------~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~Wne~f~f~~~~~~~~~~~~l~ 87 (123)
T cd04035 14 NSALHCTIIRAKGLKAM------DANGLSDPYVKLNLLPGASKATKLRTKTVHKTRNPEFNETLTYYGITEEDIQRKTLR 87 (123)
T ss_pred CCEEEEEEEEeeCCCCC------CCCCCCCceEEEEEecCCCCCCceeeeeecCCCCCCccceEEEcCCCHHHhCCCEEE
Confidence 35699999999999642 33466899999999765555567899999999999999999996 333333 4799
Q ss_pred EEEEecCCCCCCCccEEEEEeCCCccCcc
Q 007473 543 VEVRKYSMPEKDEFAGQTCLPVFQLRPGI 571 (602)
Q Consensus 543 f~V~D~d~~~~dd~lGq~~lpL~~L~~Gy 571 (602)
|.|||++.. ++++||++.++++.|.++-
T Consensus 88 ~~v~d~~~~-~~~~iG~~~i~l~~l~~~~ 115 (123)
T cd04035 88 LLVLDEDRF-GNDFLGETRIPLKKLKPNQ 115 (123)
T ss_pred EEEEEcCCc-CCeeEEEEEEEcccCCCCc
Confidence 999999877 7899999999999998763
No 117
>cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.38 E-value=2.4e-12 Score=117.38 Aligned_cols=91 Identities=15% Similarity=0.249 Sum_probs=77.6
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|.|++|++|+.. +..+.+||||+|.+.+. ..+.||++++++.||+|||+|.|.+..++...|.|.|||+
T Consensus 2 lrV~Vi~a~~L~~~------d~~g~~DPYv~v~~~~~---~~~~kT~~v~~t~nP~Wne~f~f~~~~~~~~~L~~~V~d~ 72 (124)
T cd04037 2 VRVYVVRARNLQPK------DPNGKSDPYLKIKLGKK---KINDRDNYIPNTLNPVFGKMFELEATLPGNSILKISVMDY 72 (124)
T ss_pred EEEEEEECcCCCCC------CCCCCCCcEEEEEECCe---eccceeeEEECCCCCccceEEEEEecCCCCCEEEEEEEEC
Confidence 78999999999642 34567899999998653 2346788888999999999999998878778999999999
Q ss_pred CCCCCCCccEEEEEeCCCcc
Q 007473 549 SMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~ 568 (602)
|..+++++||++.++++...
T Consensus 73 d~~~~dd~iG~~~i~l~~~~ 92 (124)
T cd04037 73 DLLGSDDLIGETVIDLEDRF 92 (124)
T ss_pred CCCCCCceeEEEEEeecccc
Confidence 98888999999999998765
No 118
>cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1). NEDL1 (AKA HECW1(HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1)) is a newly identified HECT-type E3 ubiquitin protein ligase highly expressed in favorable neuroblastomas. In vertebrates it is found primarily in neuronal tissues, including the spinal cord. NEDL1 is thought to normally function in the quality control of cellular proteins by eliminating misfolded proteins. This is thought to be accomplished via a mechanism analogous to that of ER-associated degradation by forming tight complexes and aggregating misfolded proteins that have escaped ubiquitin-mediated degradation. NEDL1, is composed of a C2 domain, two WW domains, and a ubiquitin ligase Hect domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are C
Probab=99.37 E-value=6e-12 Score=116.83 Aligned_cols=116 Identities=20% Similarity=0.289 Sum_probs=85.3
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCC--------CcccccccCCCCCCCCee-ccEEEEEeecCCcc
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPA--------DKKMKSTKKKVDNWTPVW-DDEFTFPLTIPEMA 539 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~--------d~~k~kTkvi~nn~nPvW-NEtf~F~v~~pela 539 (602)
++|++++|++|+. +.++.+||||+|.+.+... +..++||++++++.||+| ||+|.|.+... .
T Consensus 3 ~~~~~~~A~~L~~-------~~fg~~DPyvki~~~~~~~~~~~~~~~~~~~~kT~v~~~tlnP~W~nE~f~f~v~~~--~ 73 (137)
T cd08691 3 FSLSGLQARNLKK-------GMFFNPDPYVKISIQPGKRHIFPALPHHGQECRTSIVENTINPVWHREQFVFVGLPT--D 73 (137)
T ss_pred EEEEEEEeCCCCC-------ccCCCCCceEEEEEECCCcccccccccccceeeeeeEcCCCCCceEceEEEEEcCCC--C
Confidence 6899999999952 3457899999999975332 134789999999999999 99999998543 3
Q ss_pred EEEEEEEecCCCCC---CCccEEEEEeCCCccCc------cEEEEccCCCCCccCCeEEEEEE
Q 007473 540 LLRVEVRKYSMPEK---DEFAGQTCLPVFQLRPG------IHAVPLFDRKGEELGSARLLMRF 593 (602)
Q Consensus 540 ~Lrf~V~D~d~~~~---dd~lGq~~lpL~~L~~G------yR~ipL~d~~g~~l~~asL~v~i 593 (602)
.|.|.|||++..++ +++||++.+|++.|..| ..+.+|.-......-.+.|.+++
T Consensus 74 ~L~v~V~D~~~~~~~~~~d~lG~~~i~l~~l~~~~~~~~~~~~~~l~k~~~~s~v~G~~~l~~ 136 (137)
T cd08691 74 VLEIEVKDKFAKSRPIIRRFLGKLSIPVQRLLERHAIGDQELSYTLGRRTPTDHVSGQLTFRF 136 (137)
T ss_pred EEEEEEEecCCCCCccCCceEEEEEEEHHHhcccccCCceEEEEECCcCCCCCcEEEEEEEEe
Confidence 79999999875433 69999999999999755 23456653333333335555554
No 119
>cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP). ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances i
Probab=99.36 E-value=2.7e-12 Score=120.32 Aligned_cols=91 Identities=25% Similarity=0.392 Sum_probs=78.0
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
+.|+|+|++|.+|+.. +. +.+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+ ...|.|.||
T Consensus 2 G~L~V~Vi~a~nL~~~------d~-~~sDPYV~v~~g~-----~~~kT~vvk~t~nP~WnE~f~f~i~~~-~~~l~~~V~ 68 (145)
T cd04038 2 GLLKVRVVRGTNLAVR------DF-TSSDPYVVLTLGN-----QKVKTRVIKKNLNPVWNEELTLSVPNP-MAPLKLEVF 68 (145)
T ss_pred eEEEEEEEeeECCCCC------CC-CCcCcEEEEEECC-----EEEEeeeEcCCCCCeecccEEEEecCC-CCEEEEEEE
Confidence 4699999999999642 23 5689999999853 578999999999999999999999776 567999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
|++..+++++||++.+++..+..+
T Consensus 69 D~d~~~~dd~iG~a~i~l~~l~~~ 92 (145)
T cd04038 69 DKDTFSKDDSMGEAEIDLEPLVEA 92 (145)
T ss_pred ECCCCCCCCEEEEEEEEHHHhhhh
Confidence 999888899999999999887654
No 120
>cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein. The ABR protein is similar to the breakpoint cluster region protein. It has homology to guanine nucleotide exchange proteins and GTPase-activating proteins (GAPs). ABR is expressed primarily in the brain, but also includes non-neuronal tissues such as the heart. It has been associated with human diseases such as Miller-Dieker syndrome in which mental retardation and malformations of the heart are present. ABR contains a RhoGEF domain and a PH-like domain upstream of its C2 domain and a RhoGAP domain downstream of this domain. A few members also contain a Bcr-Abl oncoprotein oligomerization domain at the very N-terminal end. Splice variants of ABR have been identified. ABR is found in a wide variety of organisms including chimpanzee, dog, mouse, rat, fruit fly, and mosquito. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arr
Probab=99.34 E-value=5.1e-12 Score=113.65 Aligned_cols=92 Identities=18% Similarity=0.241 Sum_probs=72.0
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|.+|++|. +.+||||++.+.+......+.||++++++.||+|||+|+|.+.. -..|+|.|||+
T Consensus 1 L~V~V~~A~~L~-----------~~sDPYV~l~v~~~~~~~~~~KTk~i~~TlnPvWnE~F~i~l~~--s~~L~~~v~d~ 67 (118)
T cd08686 1 LNVIVHSAQGFK-----------QSANLYCTLEVDSFGYFVKKAKTRVCRDTTEPNWNEEFEIELEG--SQTLRILCYEK 67 (118)
T ss_pred CEEEEEeCCCCC-----------CCCCCEEEEEEcCccccceeeeeeeecCCCCCccceEEEEEeCC--CCEEEEEEEEc
Confidence 689999999983 23799999988754332457899999999999999999999863 44899999997
Q ss_pred -------CCCCCCCccEEEEEeCC--Ccc-CccEE
Q 007473 549 -------SMPEKDEFAGQTCLPVF--QLR-PGIHA 573 (602)
Q Consensus 549 -------d~~~~dd~lGq~~lpL~--~L~-~GyR~ 573 (602)
|..+.|+++|.+.+.|+ .+. .|++-
T Consensus 68 ~~~~~~~d~~~~d~~~G~g~i~Ld~~~~~~~~~~~ 102 (118)
T cd08686 68 CYSKVKLDGEGTDAIMGKGQIQLDPQSLQTKKWQE 102 (118)
T ss_pred ccccccccccCcccEEEEEEEEECHHHhccCCeeE
Confidence 45577999988877765 343 36644
No 121
>cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs). RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin
Probab=99.33 E-value=7.8e-12 Score=116.10 Aligned_cols=104 Identities=29% Similarity=0.318 Sum_probs=84.8
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecC------------
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIP------------ 536 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~p------------ 536 (602)
|+|+|+.|++|+.. ..+..||||+|.+.+. ....+++|+++.++.||.|||+|.|.+...
T Consensus 1 L~V~Vi~A~~L~~~-------~~g~~dPyv~v~~~~~-~~~~~~rT~vv~~t~nP~Wne~f~f~~~~~~~~~~~~~~~~~ 72 (137)
T cd08675 1 LSVRVLECRDLALK-------SNGTCDPFARVTLNYS-SKTDTKRTKVKKKTNNPRFDEAFYFELTIGFSYEKKSFKVEE 72 (137)
T ss_pred CEEEEEEccCCCcc-------cCCCCCcEEEEEEecC-CcCCeeccceeeCCCCCCcceEEEEEcccccccccccccccc
Confidence 57999999999631 2356899999998753 444678999999999999999999998764
Q ss_pred ---CccEEEEEEEecCCCCCCCccEEEEEeCCCccCc---cEEEEccCCC
Q 007473 537 ---EMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPG---IHAVPLFDRK 580 (602)
Q Consensus 537 ---ela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~ 580 (602)
.-..|.|.|||.+..++++|||++.+++..+..+ ..|++|....
T Consensus 73 ~~~~~~~l~i~V~d~~~~~~~~~IG~~~i~l~~l~~~~~~~~W~~L~~~~ 122 (137)
T cd08675 73 EDLEKSELRVELWHASMVSGDDFLGEVRIPLQGLQQAGSHQAWYFLQPRE 122 (137)
T ss_pred ccccccEEEEEEEcCCcCcCCcEEEEEEEehhhccCCCcccceEecCCcC
Confidence 3357999999999887899999999999998654 5778887654
No 122
>PLN03008 Phospholipase D delta
Probab=99.33 E-value=1e-11 Score=141.35 Aligned_cols=105 Identities=18% Similarity=0.371 Sum_probs=90.9
Q ss_pred CCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCcc
Q 007473 492 SPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGI 571 (602)
Q Consensus 492 s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~Gy 571 (602)
..+||||+|.+.+ ....||++++++.||+|||+|.|.+..+. ..|.|.|+|+|.++ +++||++.|||..|.+|.
T Consensus 75 ~tSDPYV~I~Lg~----~rv~RTrVi~n~~NPvWNE~F~f~vah~~-s~L~f~VkD~D~~g-aD~IG~a~IPL~~L~~Ge 148 (868)
T PLN03008 75 ITSDPYVTVVVPQ----ATLARTRVLKNSQEPLWDEKFNISIAHPF-AYLEFQVKDDDVFG-AQIIGTAKIPVRDIASGE 148 (868)
T ss_pred CCCCceEEEEECC----cceeeEEeCCCCCCCCcceeEEEEecCCC-ceEEEEEEcCCccC-CceeEEEEEEHHHcCCCC
Confidence 4579999999953 23559999999999999999999998764 58999999999887 699999999999999995
Q ss_pred ---EEEEccCCCCCcc-CCeEEEEEEEEEEccccC
Q 007473 572 ---HAVPLFDRKGEEL-GSARLLMRFEFYEADVLP 602 (602)
Q Consensus 572 ---R~ipL~d~~g~~l-~~asL~v~i~~~e~~~~~ 602 (602)
+|++|.+..|++. .++.|.|.++|.++.-.|
T Consensus 149 ~vd~Wl~Ll~~~~kp~k~~~kl~v~lqf~pv~~~~ 183 (868)
T PLN03008 149 RISGWFPVLGASGKPPKAETAIFIDMKFTPFDQIH 183 (868)
T ss_pred ceEEEEEccccCCCCCCCCcEEEEEEEEEEccccc
Confidence 7899999999998 458999999999876543
No 123
>cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.30 E-value=1.1e-11 Score=112.79 Aligned_cols=94 Identities=16% Similarity=0.204 Sum_probs=75.8
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
..|.|+|+.|++++. + + ..||||+|.+.+ .+.+|++++++ ||.|||+|.|.+..++.. |.+.||
T Consensus 2 ~~L~V~Vv~Ar~L~~----~--~---~~dPYV~Ik~g~-----~k~kT~v~~~~-nP~WnE~F~F~~~~~~~~-L~v~V~ 65 (127)
T cd08394 2 SLLCVLVKKAKLDGA----P--D---KFNTYVTLKVQN-----VKSTTIAVRGS-QPCWEQDFMFEINRLDLG-LVIELW 65 (127)
T ss_pred ceEEEEEEEeeCCCC----C--C---CCCCeEEEEECC-----EEeEeeECCCC-CCceeeEEEEEEcCCCCE-EEEEEE
Confidence 369999999999842 1 1 248999999954 57789988774 999999999999765544 999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCc-----cEEEEcc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPG-----IHAVPLF 577 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~G-----yR~ipL~ 577 (602)
|+|.. +||++|++.+||+.+..+ -.|++|.
T Consensus 66 dkd~~-~DD~lG~v~i~L~~v~~~~~~~~~~Wy~L~ 100 (127)
T cd08394 66 NKGLI-WDTLVGTVWIPLSTIRQSNEEGPGEWLTLD 100 (127)
T ss_pred eCCCc-CCCceEEEEEEhHHcccCCCCCCCccEecC
Confidence 99965 699999999999998643 3567774
No 124
>cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene. In plants elicitor-responsive proteins are triggered in response to specific elicitor molecules such as glycolproteins, peptides, carbohydrates and lipids. A host of defensive responses are also triggered resulting in localized cell death. Antimicrobial secondary metabolites, such as phytoalexins, or defense-related proteins, including pathogenesis-related (PR) proteins are also produced. There is a single C2 domain present here. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contai
Probab=99.30 E-value=1.2e-11 Score=112.31 Aligned_cols=91 Identities=19% Similarity=0.290 Sum_probs=75.8
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCC-CCCCeeccEEEEEeecCC---ccEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVD-NWTPVWDDEFTFPLTIPE---MALLRV 543 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~n-n~nPvWNEtf~F~v~~pe---la~Lrf 543 (602)
.|.|+|++|++|+. .+..+.+||||+|.+.+ ..++|+++.+ +.||+|||+|.|.+..+. ...|.|
T Consensus 2 ~L~V~V~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~~T~~~~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v 70 (124)
T cd04049 2 TLEVLLISAKGLQD------TDFLGKIDPYVIIQCRT-----QERKSKVAKGDGRNPEWNEKFKFTVEYPGWGGDTKLIL 70 (124)
T ss_pred eEEEEEEecCCCCC------CCCCCCcCceEEEEECC-----EeeeeeEcCCCCCCCcccceEEEEecCcccCCCCEEEE
Confidence 58999999999963 13346789999999854 4568888775 799999999999998773 467999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccC
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRP 569 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~ 569 (602)
.|||.+..+++++||++.+++..+..
T Consensus 71 ~V~d~~~~~~d~~iG~~~i~l~~l~~ 96 (124)
T cd04049 71 RIMDKDNFSDDDFIGEATIHLKGLFE 96 (124)
T ss_pred EEEECccCCCCCeEEEEEEEhHHhhh
Confidence 99999988889999999999999854
No 125
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.28 E-value=3.3e-12 Score=133.87 Aligned_cols=96 Identities=20% Similarity=0.349 Sum_probs=84.7
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc-cEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM-ALLRVEV 545 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel-a~Lrf~V 545 (602)
..|+|+|..|.+|-. .|.++.+||||++.+...+....|+||++++.++||+|||+|+|++...+. ..|.+.|
T Consensus 180 ~~l~v~i~ea~NLiP------MDpNGlSDPYvk~kliPD~~~~sKqKTkTik~~LNP~wNEtftf~Lkp~DkdrRlsiEv 253 (683)
T KOG0696|consen 180 DVLTVTIKEAKNLIP------MDPNGLSDPYVKLKLIPDPKNESKQKTKTIKATLNPVWNETFTFKLKPSDKDRRLSIEV 253 (683)
T ss_pred ceEEEEehhhccccc------cCCCCCCCcceeEEeccCCcchhhhhhhhhhhhcCccccceeEEecccccccceeEEEE
Confidence 358888999988843 356788999999999998888899999999999999999999999976554 5799999
Q ss_pred EecCCCCCCCccEEEEEeCCCcc
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
||+|..+++||+|...+.++.|.
T Consensus 254 WDWDrTsRNDFMGslSFgisEl~ 276 (683)
T KOG0696|consen 254 WDWDRTSRNDFMGSLSFGISELQ 276 (683)
T ss_pred ecccccccccccceecccHHHHh
Confidence 99999999999999999998885
No 126
>cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.27 E-value=1.6e-11 Score=111.40 Aligned_cols=92 Identities=23% Similarity=0.267 Sum_probs=77.5
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
.|+|+|++|++++.. +..+.+||||+|.+.+ ..+.+|+++.++.||+|||+|.|.+..+. ..|+|.|||
T Consensus 2 ~L~V~Vi~a~~L~~~------d~~g~~DPYv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~~~~-~~L~v~v~d 70 (120)
T cd04045 2 VLRLHIRKANDLKNL------EGVGKIDPYVRVLVNG----IVKGRTVTISNTLNPVWDEVLYVPVTSPN-QKITLEVMD 70 (120)
T ss_pred eEEEEEEeeECCCCc------cCCCCcCCEEEEEECC----EEeeceeEECCCcCCccCceEEEEecCCC-CEEEEEEEE
Confidence 589999999998642 3456789999999854 24578999999999999999999886653 589999999
Q ss_pred cCCCCCCCccEEEEEeCCCccCc
Q 007473 548 YSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 548 ~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
++..+++++||++.+++..+..+
T Consensus 71 ~~~~~~d~~IG~~~~~l~~l~~~ 93 (120)
T cd04045 71 YEKVGKDRSLGSVEINVSDLIKK 93 (120)
T ss_pred CCCCCCCCeeeEEEEeHHHhhCC
Confidence 99888899999999999988765
No 127
>cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy
Probab=99.27 E-value=2.8e-11 Score=114.35 Aligned_cols=94 Identities=23% Similarity=0.356 Sum_probs=76.1
Q ss_pred cceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCC------------------------cccccccCCCCC
Q 007473 465 VKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPAD------------------------KKMKSTKKKVDN 520 (602)
Q Consensus 465 ~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d------------------------~~k~kTkvi~nn 520 (602)
....|+|+|++|++|+. .+..+.+||||+|.+.+.... ...++|+++.++
T Consensus 26 ~~~~L~V~vi~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kT~v~~~t 99 (153)
T cd08676 26 PIFVLKVTVIEAKGLLA------KDVNGFSDPYCMLGIVPASRERNSEKSKKRKSHRKKAVLKDTVPAKSIKVTEVKPQT 99 (153)
T ss_pred CeEEEEEEEEeccCCcc------cCCCCCCCceEEEEEcccccccccccccccccccccccccccccccccEecceecCC
Confidence 35679999999999853 244567899999998532110 123689999999
Q ss_pred CCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEEEEeCCCcc
Q 007473 521 WTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 521 ~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
.||+|||+|.|.+..+....|.|.|||++ +++||++.++++.+.
T Consensus 100 lnP~WnE~F~f~v~~~~~~~L~i~V~D~d----d~~IG~v~i~l~~l~ 143 (153)
T cd08676 100 LNPVWNETFRFEVEDVSNDQLHLDIWDHD----DDFLGCVNIPLKDLP 143 (153)
T ss_pred CCCccccEEEEEeccCCCCEEEEEEEecC----CCeEEEEEEEHHHhC
Confidence 99999999999997655678999999987 789999999999987
No 128
>cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs). RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain either a single C2 domain or two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2
Probab=99.26 E-value=6.4e-11 Score=106.00 Aligned_cols=113 Identities=18% Similarity=0.285 Sum_probs=84.1
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEEEEE
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRVEVR 546 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf~V~ 546 (602)
|+|+|+.|.+|+.. +.+||||+|.+.+ ...++|+++++ .||.|||+|.|.+...++ ..|.|.|+
T Consensus 2 L~v~vi~a~~l~~~---------~~~dpyv~v~~~~----~~~~kT~~~~~-~~P~Wne~f~f~v~~~~~~~~~l~i~v~ 67 (117)
T cd08383 2 LRLRILEAKNLPSK---------GTRDPYCTVSLDQ----VEVARTKTVEK-LNPFWGEEFVFDDPPPDVTFFTLSFYNK 67 (117)
T ss_pred eEEEEEEecCCCcC---------CCCCceEEEEECC----EEeEecceEEC-CCCcccceEEEecCCccccEEEEEEEEE
Confidence 78999999999631 4579999999865 23468999988 999999999999876554 35778888
Q ss_pred ecCCCCCCCccEEEEEeCCCccCcc-EEEEccCCCCCccCCeEEEEEEEE
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPGI-HAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~Gy-R~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
|.+...++.++|.+.+....+..+. .|++|....+.....++|.+.+.|
T Consensus 68 d~~~~~~~~~~g~v~l~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 117 (117)
T cd08383 68 DKRSKDRDIVIGKVALSKLDLGQGKDEWFPLTPVDPDSEVQGSVRLRARY 117 (117)
T ss_pred ecccCCCeeEEEEEEecCcCCCCcceeEEECccCCCCCCcCceEEEEEEC
Confidence 8776555677777665555554443 578998766655556788888764
No 129
>PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking. C2 domains are unique among membrane targeting domains in that they show wide range of lipid selectivity for the major components of cell membranes, including phosphatidylserine and phosphatidylcholine. This C2 domain is about 116 amino-acid residues and is located between the two copies of the C1 domain in Protein Kinase C (that bind phorbol esters and diacylglycerol) (see PDOC00379 from PROSITEDOC) and the protein kinase catalytic domain (see PDOC00100 from PROSITEDOC). Regions with significant homology [] to the C2-domain have been found in many proteins. The C2 domain is thought to be involved in calcium-dependent phospholipid binding [] and in membrane targetting processes such as subcellular localisation. The 3D structure of the C2 domain of synaptotagmin has been reported [], the domain forms an eight-stranded beta sandwich constructed around a conserved 4-stranded motif, designated a C2 key []. Calcium binds in a cup-shaped depression formed by the N- and C-terminal loops of the C2-key motif. Structural analyses of several C2 domains have shown them to consist of similar ternary structures in which three Ca2+-binding loops are located at the end of an 8 stranded antiparallel beta sandwich. ; GO: 0005515 protein binding; PDB: 1RSY_A 1BYN_A 3NSJ_A 3QR1_D 3HN8_C 1DQV_A 3M7F_B 3KWU_A 3KWT_A 1V27_A ....
Probab=99.26 E-value=2e-11 Score=101.70 Aligned_cols=85 Identities=31% Similarity=0.436 Sum_probs=73.5
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|++|++|+.. +..+.+||||+|.+.+... ..++|+++.++.+|.|||+|.|.+..++.+.|.|.|||.
T Consensus 1 L~v~I~~a~~L~~~------~~~~~~~~yv~v~~~~~~~--~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~~~V~~~ 72 (85)
T PF00168_consen 1 LTVTIHSARNLPSK------DSNGKPDPYVRVSVNGSES--TKYKTKVKKNTSNPVWNEEFEFPLDDPDLDSLSFEVWDK 72 (85)
T ss_dssp EEEEEEEEESSSSS------STTSSBEEEEEEEEETTTC--EEEEECCBSSBSSEEEEEEEEEEESHGCGTEEEEEEEEE
T ss_pred CEEEEEEEECCCCc------ccCCcccccceeecceeee--eeeeeeeeeccccceeeeeeeeeeecccccceEEEEEEC
Confidence 78999999999642 2345679999999998544 568999999999999999999999888888899999999
Q ss_pred CCCCCCCccEEEE
Q 007473 549 SMPEKDEFAGQTC 561 (602)
Q Consensus 549 d~~~~dd~lGq~~ 561 (602)
+..+++++||+++
T Consensus 73 ~~~~~~~~iG~~~ 85 (85)
T PF00168_consen 73 DSFGKDELIGEVK 85 (85)
T ss_dssp TSSSSEEEEEEEE
T ss_pred CCCCCCCEEEEEC
Confidence 9888899999874
No 130
>cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.25 E-value=3.7e-11 Score=107.31 Aligned_cols=99 Identities=19% Similarity=0.225 Sum_probs=80.6
Q ss_pred CCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEEEEeCCCcc
Q 007473 489 KFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 489 d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
..++.+||||+|.+.+ ...++|+++.++.||+|||+|.|.+..+....|.|.|+|++.. ++++||.+.+||+.+.
T Consensus 8 ~~~G~~dPYv~v~v~~----~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~i~v~d~~~~-~d~~iG~~~v~L~~l~ 82 (111)
T cd04052 8 SKTGLLSPYAELYLNG----KLVYTTRVKKKTNNPSWNASTEFLVTDRRKSRVTVVVKDDRDR-HDPVLGSVSISLNDLI 82 (111)
T ss_pred ccCCCCCceEEEEECC----EEEEEEeeeccCCCCccCCceEEEecCcCCCEEEEEEEECCCC-CCCeEEEEEecHHHHH
Confidence 3456689999999964 2356899988899999999999998766556799999999988 7999999999999873
Q ss_pred -C---ccEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 569 -P---GIHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 569 -~---GyR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
. +.+|.+|.+ ...++|.+++.|..
T Consensus 83 ~~~~~~~~w~~L~~-----~~~G~i~~~~~~~p 110 (111)
T cd04052 83 DATSVGQQWFPLSG-----NGQGRIRISALWKP 110 (111)
T ss_pred hhhhccceeEECCC-----CCCCEEEEEEEEec
Confidence 2 357888865 24588999988875
No 131
>cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase. E3 ubiquitin ligase is part of the ubiquitylation mechanism responsible for controlling surface expression of membrane proteins. The sequential action of several enzymes are involved: ubiquitin-activating enzyme E1, ubiquitin-conjugating enzyme E2, and ubiquitin-protein ligase E3 which is responsible for substrate recognition and promoting the transfer of ubiquitin to the target protein. E3 ubiquitin ligase is composed of an N-terminal C2 domain, 4 WW domains, and a HECTc domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction e
Probab=99.24 E-value=5.6e-11 Score=108.47 Aligned_cols=113 Identities=17% Similarity=0.205 Sum_probs=84.1
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEe
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRK 547 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D 547 (602)
.|.|+|++|+.+.. +..+.+||||+|.+.+. .+.+|++++++.||+|||+|.|.+. +...|.|.|||
T Consensus 3 ~L~V~i~~a~l~~~-------~~~~~~dPyv~v~~~~~----~~~kT~v~~~t~~P~Wne~f~~~~~--~~~~l~~~V~d 69 (125)
T cd04021 3 QLQITVESAKLKSN-------SKSFKPDPYVEVTVDGQ----PPKKTEVSKKTSNPKWNEHFTVLVT--PQSTLEFKVWS 69 (125)
T ss_pred eEEEEEEeeECCCC-------CcCCCCCeEEEEEECCc----ccEEeeeeCCCCCCccccEEEEEeC--CCCEEEEEEEe
Confidence 58999999983321 22456899999998652 3679999999999999999999974 34689999999
Q ss_pred cCCCCCCCccEEEEEeCCCccCc-------c-EEEEccCCCC-CccCCeEEEEEE
Q 007473 548 YSMPEKDEFAGQTCLPVFQLRPG-------I-HAVPLFDRKG-EELGSARLLMRF 593 (602)
Q Consensus 548 ~d~~~~dd~lGq~~lpL~~L~~G-------y-R~ipL~d~~g-~~l~~asL~v~i 593 (602)
++..+.+++||++.++|+.+..+ + -+++|....- .-...+.|.+.+
T Consensus 70 ~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 124 (125)
T cd04021 70 HHTLKADVLLGEASLDLSDILKNHNGKLENVKLTLNLSSENKGSSVKVGELTVIL 124 (125)
T ss_pred CCCCCCCcEEEEEEEEHHHhHhhcCCCccceEEEEEEEccCCCcceeeeeEEEEe
Confidence 99888899999999999988642 2 2567764331 222345665544
No 132
>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily. The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph
Probab=99.24 E-value=4e-11 Score=116.18 Aligned_cols=98 Identities=28% Similarity=0.394 Sum_probs=84.5
Q ss_pred cCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc------ccchHHHHHHHHhhcccccC
Q 007473 124 TGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT------TPVELIKCLRAIKENAFSAS 197 (602)
Q Consensus 124 SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt------s~i~f~dvi~aI~~~AF~~S 197 (602)
.+|+-|-...+ +.+..+|..||..|||.||+|||...| +.|||+|+.++. .-.+|.||++.++++++ .+
T Consensus 2 iaHRG~~~~~p---eNT~~af~~a~~~G~~~iE~DV~lt~D-g~lvv~HD~~~~r~~~~~~~ptl~evl~~~~~~~~-~~ 76 (179)
T cd08555 2 LSHRGYSQNGQ---ENTLEAFYRALDAGARGLELDVRLTKD-GELVVYHGPTLDRTTAGILPPTLEEVLELIADYLK-NP 76 (179)
T ss_pred EecCCCCCCCC---ccHHHHHHHHHHcCCCEEEEEEeEcCC-CeEEEECCCccccccCCCCCCCHHHHHHHHHhhhh-cC
Confidence 37888866554 889999999999999999999999876 579999999986 56889999999999999 88
Q ss_pred CCceEEEecCCCCH----HHHHHHHHHHHHHhh
Q 007473 198 PYPVILTFEDHLNP----HLQAKVAQMITQTFG 226 (602)
Q Consensus 198 ~yPvILSlE~Hcs~----~qQ~~ma~~l~~~~G 226 (602)
.+|++|.||.+++. .++.++++.+++..+
T Consensus 77 ~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~~~ 109 (179)
T cd08555 77 DYTIILSLEIKQDSPEYDEFLAKVLKELRVYFD 109 (179)
T ss_pred CCceEEEEEeCCCCCcchHHHHHHHHHHHHcCC
Confidence 89999999999974 666777877776654
No 133
>cd04047 C2B_Copine C2 domain second repeat in Copine. There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 dom
Probab=99.18 E-value=8.7e-11 Score=104.30 Aligned_cols=92 Identities=17% Similarity=0.264 Sum_probs=71.9
Q ss_pred EEEeccCcccCccCcCCCCCCCCCceEEEEEecCC-CCcccccccCCCCCCCCeeccEEEEEee---cCC-ccEEEEEEE
Q 007473 472 KAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVP-ADKKMKSTKKKVDNWTPVWDDEFTFPLT---IPE-MALLRVEVR 546 (602)
Q Consensus 472 ~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p-~d~~k~kTkvi~nn~nPvWNEtf~F~v~---~pe-la~Lrf~V~ 546 (602)
-.++|++|+. .+..+.+||||+|.+.+.. ....++||++++++.||+|| +|.|.+. ..+ ...|+|.||
T Consensus 5 ~~i~a~~L~~------~d~~~~~DPyv~v~~~~~~~~~~~~~kT~vi~~t~nP~Wn-~f~~~~~~l~~~~~~~~l~~~V~ 77 (110)
T cd04047 5 LQFSGKKLDK------KDFFGKSDPFLEISRQSEDGTWVLVYRTEVIKNTLNPVWK-PFTIPLQKLCNGDYDRPIKIEVY 77 (110)
T ss_pred EEEEeCCCCC------CCCCCCCCeeEEEEEECCCCCEEEEEeeeEeccCCCCceE-EEEEEHHHhcCCCcCCEEEEEEE
Confidence 4568888863 2445678999999987632 12345799999999999999 6777643 222 368999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
|++..+++++||++.++++.|..+
T Consensus 78 d~d~~~~d~~iG~~~~~l~~l~~~ 101 (110)
T cd04047 78 DYDSSGKHDLIGEFETTLDELLKS 101 (110)
T ss_pred EeCCCCCCcEEEEEEEEHHHHhcC
Confidence 999988899999999999999854
No 134
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.14 E-value=2.4e-10 Score=124.72 Aligned_cols=123 Identities=16% Similarity=0.229 Sum_probs=95.5
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRVE 544 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf~ 544 (602)
..|+|+|+.|.+|+.. +..+.+||||++.+.. ....+.+|+++++++||+|||+|.|.|...++ ..|.|.
T Consensus 167 ~~L~V~V~qa~~Lp~~------d~~g~sdpyVK~~llP--dk~~k~kT~v~r~tlnP~fnEtf~f~v~~~~l~~~~L~l~ 238 (421)
T KOG1028|consen 167 NLLTVRVIQAHDLPAK------DRGGTSDPYVKVYLLP--DKKGKFKTRVHRKTLNPVFNETFRFEVPYEELSNRVLHLS 238 (421)
T ss_pred CEEEEEEEEecCCCcc------cCCCCCCCeeEEEEcC--CCCCcceeeeeecCcCCccccceEeecCHHHhccCEEEEE
Confidence 4599999999999753 2234589999999985 33678899999999999999999999876655 579999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCcc---EEEEccCCCCCcc-CCeEEEEEEEEEE
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRKGEEL-GSARLLMRFEFYE 597 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~g~~l-~~asL~v~i~~~e 597 (602)
|||+|.++++++||++.+||..+.... .|.+|....-..- ..+.|++..+|..
T Consensus 239 V~~~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~~gel~~sL~Y~p 295 (421)
T KOG1028|consen 239 VYDFDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEELAGELLLSLCYLP 295 (421)
T ss_pred EEecCCcccccEEEEEEecCccccccccceeeeccccccCCcccccceEEEEEEeec
Confidence 999999999999999999999887655 4666654321111 1157777666654
No 135
>smart00239 C2 Protein kinase C conserved region 2 (CalB). Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotamins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles.
Probab=99.10 E-value=5.7e-10 Score=94.90 Aligned_cols=99 Identities=29% Similarity=0.430 Sum_probs=81.5
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|.|+|+.|+++... ......+|||++.+.+.. ....+|+++.++.||.|||+|.|.+..+....|.|.|||.
T Consensus 2 l~i~i~~~~~l~~~------~~~~~~~~yv~v~~~~~~--~~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~i~v~~~ 73 (101)
T smart00239 2 LTVKIISARNLPKK------DKKGKSDPYVKVSLDGDP--KEKKKTKVVKNTLNPVWNETFEFEVPPPELAELEIEVYDK 73 (101)
T ss_pred eEEEEEEeeCCCCC------CCCCCCCceEEEEEeCCc--cceEeeeEecCCCCCcccceEEEEecCcccCEEEEEEEec
Confidence 78999999998532 122457999999998632 3467899998889999999999998776567899999999
Q ss_pred CCCCCCCccEEEEEeCCCccCccEEEE
Q 007473 549 SMPEKDEFAGQTCLPVFQLRPGIHAVP 575 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~GyR~ip 575 (602)
+..+.+.++|.+.+++..+..|+++.+
T Consensus 74 ~~~~~~~~~G~~~~~l~~~~~~~~~~~ 100 (101)
T smart00239 74 DRFGRDDFIGQVTIPLSDLLLGGRHEK 100 (101)
T ss_pred CCccCCceeEEEEEEHHHcccCccccC
Confidence 877678999999999999999987654
No 136
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.05 E-value=3.6e-10 Score=122.79 Aligned_cols=117 Identities=19% Similarity=0.275 Sum_probs=89.4
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
.+++++|++||||.. .|..+.+||||.+++. +.++||++|..++||+|||.|+|.+.+. -..|+++||
T Consensus 295 akitltvlcaqgl~a------kdktg~sdpyvt~qv~-----ktkrrtrti~~~lnpvw~ekfhfechns-tdrikvrvw 362 (1283)
T KOG1011|consen 295 AKITLTVLCAQGLIA------KDKTGKSDPYVTAQVG-----KTKRRTRTIHQELNPVWNEKFHFECHNS-TDRIKVRVW 362 (1283)
T ss_pred eeeEEeeeeccccee------cccCCCCCCcEEEeec-----ccchhhHhhhhccchhhhhheeeeecCC-CceeEEEEe
Confidence 468999999999953 2455778999999986 3788999999999999999999999865 346999999
Q ss_pred ecCCC-----------CCCCccEEEEEeCCCccCcc-EEEEccCCCCCccCCeEEEEEEEE
Q 007473 547 KYSMP-----------EKDEFAGQTCLPVFQLRPGI-HAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 547 D~d~~-----------~~dd~lGq~~lpL~~L~~Gy-R~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
|+|.. ..|||+||..|-+..|.... -|..|-....+....+.+.+||.+
T Consensus 363 ded~dlksklrqkl~resddflgqtvievrtlsgemdvwynlekrtdksavsgairlhisv 423 (1283)
T KOG1011|consen 363 DEDNDLKSKLRQKLTRESDDFLGQTVIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHISV 423 (1283)
T ss_pred cCcccHHHHHHHHhhhcccccccceeEEEEecccchhhhcchhhccchhhccceEEEEEEE
Confidence 98853 35899999999998886553 244554444444444555555544
No 137
>cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.01 E-value=2.1e-09 Score=99.14 Aligned_cols=97 Identities=16% Similarity=0.186 Sum_probs=78.9
Q ss_pred EEEEEEeccCcccCccCcCCCCCC--CCCceEEEEEecCCCCcccccccCCCCCCC--CeeccEEEEEeec---------
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWS--PPQFYTRVGIAGVPADKKMKSTKKKVDNWT--PVWDDEFTFPLTI--------- 535 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s--~~DpyV~V~i~G~p~d~~k~kTkvi~nn~n--PvWNEtf~F~v~~--------- 535 (602)
|+|.|..+++++... .+..+ .+||||++.+.|. ...+++|.++.++.| |+||+.|.|.+..
T Consensus 2 LRViIw~~~~v~~~~----~~~~g~~~sD~yVK~~L~~~--~~~kqkTDVHyrslnG~~~FNwRfvF~~~~~~~~~~~~~ 75 (133)
T cd08374 2 LRVIVWNTRDVLNDD----TNITGEKMSDIYVKGWLDGL--EEDKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEKKIVV 75 (133)
T ss_pred EEEEEEECcCCcccc----cccCCccccCeEEEEEEccC--cccccccceEEecCCCCcEEeEEEEEeeecCCccceeEE
Confidence 789999999976431 11123 3899999999875 346789999999988 9999999998765
Q ss_pred ------------CCc--cEEEEEEEecCCCCCCCccEEEEEeCCCccCcc
Q 007473 536 ------------PEM--ALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGI 571 (602)
Q Consensus 536 ------------pel--a~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~Gy 571 (602)
.++ ..|.++|||.|..++|++||+..++|..|.+|.
T Consensus 76 ~~~~~~~~~~~~e~~~~~~L~lqvwD~D~~s~dd~iG~~~l~l~~l~~~~ 125 (133)
T cd08374 76 IKKEHFWSLDETEYKIPPKLTLQVWDNDKFSPDDFLGSLELDLSILPRPA 125 (133)
T ss_pred EeeccccccCcceEecCcEEEEEEEECcccCCCCcceEEEEEhhhccccc
Confidence 222 579999999999999999999999999998765
No 138
>PLN03200 cellulose synthase-interactive protein; Provisional
Probab=98.99 E-value=1.7e-09 Score=133.91 Aligned_cols=115 Identities=14% Similarity=0.236 Sum_probs=92.5
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc-cEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM-ALLRVE 544 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel-a~Lrf~ 544 (602)
.+.|+|+|++|+++. +.++.+||||.|.+.. ..++||+++++|.||+|||+|+|.+..|.. ..|.|.
T Consensus 1979 ~G~L~V~V~~a~nl~--------~~~~~sdPyv~l~~g~----~~~~kTkvvk~~~nP~Wne~f~~~~~~p~~~~~l~ie 2046 (2102)
T PLN03200 1979 PGSLTVTIKRGNNLK--------QSMGNTNAFCKLTLGN----GPPRQTKVVSHSSSPEWKEGFTWAFDSPPKGQKLHIS 2046 (2102)
T ss_pred CcceEEEEeeccccc--------cccCCCCCeEEEEECC----CCcccccccCCCCCCCcccceeeeecCCCCCCceEEE
Confidence 478999999999984 2245689999999873 236799999999999999999999987764 459999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCcc---EEEEccC---CCCCccCCeEEEEEEEEE
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFD---RKGEELGSARLLMRFEFY 596 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d---~~g~~l~~asL~v~i~~~ 596 (602)
|||+|.++ ++.+|.+.+++..+..+- -+++|.+ +.|++ -+|-++|+|.
T Consensus 2047 v~d~d~f~-kd~~G~~~i~l~~vv~~~~~~~~~~L~~~~~k~G~~---~~~~~e~~w~ 2100 (2102)
T PLN03200 2047 CKSKNTFG-KSSLGKVTIQIDRVVMEGTYSGEYSLNPESNKDGSS---RTLEIEFQWS 2100 (2102)
T ss_pred EEecCccC-CCCCceEEEEHHHHhcCceeeeeeecCcccccCCCc---ceEEEEEEec
Confidence 99999885 569999999999987553 3678875 33432 4688998885
No 139
>PLN02270 phospholipase D alpha
Probab=98.90 E-value=9.1e-09 Score=117.63 Aligned_cols=131 Identities=15% Similarity=0.234 Sum_probs=104.5
Q ss_pred ceeEEEEEEeccCcccCc-----c-------CcCCCCCCCCCceEEEEEecCCCCcccccccCCCCC-CCCeeccEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDF-----K-------QMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDN-WTPVWDDEFTFP 532 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~-----~-------~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn-~nPvWNEtf~F~ 532 (602)
.++|.|+|+.|.+||... . .+-......+||||.|.+.+ ....||+++.|. .||+|||+|...
T Consensus 7 hg~l~~~i~ea~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~tv~~~~----a~v~rtr~~~~~~~~p~w~e~f~i~ 82 (808)
T PLN02270 7 HGTLHATIYEVDKLHSGGGPGFLGKLVANVEETVGVGKGESQLYATIDLEK----ARVGRTRKIENEPKNPRWYESFHIY 82 (808)
T ss_pred ecceEEEEEEcccCCCcchhhHHHHHHhccchhccCCCCCCCceEEEEeCC----cEEEEEeecCCCCCCCccccceEEe
Confidence 467999999999887410 0 00001123579999999986 245699999886 699999999988
Q ss_pred eecCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCcc---EEEEccCCCCCcc-CCeEEEEEEEEEEccccC
Q 007473 533 LTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRKGEEL-GSARLLMRFEFYEADVLP 602 (602)
Q Consensus 533 v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~g~~l-~~asL~v~i~~~e~~~~~ 602 (602)
+..+ .+-|.|+|+|.|.++ ..+||.+.+|+..|..|- +|+|+.+.+|+|+ ++++|.|+++|.++...|
T Consensus 83 ~ah~-~~~v~f~vkd~~~~g-~~~ig~~~~p~~~~~~g~~i~~~~~~~~~~~~p~~~~~~~~~~~~f~~~~~~~ 154 (808)
T PLN02270 83 CAHM-ASNIIFTVKDDNPIG-ATLIGRAYIPVEEILDGEEVDRWVEILDNDKNPIHGGSKIHVKLQYFEVTKDR 154 (808)
T ss_pred eccC-cceEEEEEecCCccC-ceEEEEEEEEHHHhcCCCccccEEeccCCCCCcCCCCCEEEEEEEEEEcccCc
Confidence 8766 477999999999877 679999999999999884 7899999999998 558999999999876543
No 140
>cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins. This subfamily corresponds to the catalytic domain present in Bacillus cereus phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and its sequence homologs found in bacteria and eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Their catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This family also includes some uncharacterized eukaryotic homologs, which
Probab=98.87 E-value=5.5e-09 Score=108.31 Aligned_cols=138 Identities=18% Similarity=0.242 Sum_probs=108.8
Q ss_pred CCCcccccccccCCcccccCCc--cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHHh
Q 007473 113 MTAPLSHYFIYTGHNSYLIGNQ--FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIK 190 (602)
Q Consensus 113 M~~PLs~YfI~SSHNTYL~g~Q--l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~ 190 (602)
-+.||++.-|-.|||++-...- -.+++....+..-|..|+|.++|+|+..+ +++..++||..... .+|.||++.|+
T Consensus 6 d~~~l~~lsipGTHdS~~~~~~~~~~~~~Q~~~i~~QL~~GiR~lDiR~~~~~-~~~l~~~Hg~~~~~-~~~~dvL~~i~ 83 (279)
T cd08586 6 DDTPLSELSIPGTHDSGALHGGLSSSVQCQDWSIAEQLNAGIRFLDIRLRLID-NNDLAIHHGPFYQG-LTFGDVLNECY 83 (279)
T ss_pred CCCEeeeeeecccchhccccCCCccceecCCCCHHHHHhcCCeEEEEEeeecC-CCeEEEEccCcccc-CcHHHHHHHHH
Confidence 3789999999999998754332 34556666788899999999999999864 24688999976555 89999999999
Q ss_pred hcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCC---CCCCCCChhhccccEEEecC
Q 007473 191 ENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESE---CLKEFPSPEELKYRIIISTK 255 (602)
Q Consensus 191 ~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K 255 (602)
++.-..-.-.|||+|..+++... -.+-+.++|.+.+..+... ....+|+..++||||++-.+
T Consensus 84 ~FL~~nP~E~Vil~l~~e~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~PtLge~RGKIVLl~r 148 (279)
T cd08586 84 SFLDANPSETIIMSLKQEGSGDG---NTDSFAEIFKEYLDNYPSYFYYTESKIPTLGEVRGKIVLLRR 148 (279)
T ss_pred HHHHhCCCcEEEEEEEecCCCCC---chHHHHHHHHHHHhcccccccccCCCCCchHHhcccEEEEEe
Confidence 98877777889999999998864 3444666666666665432 24789999999999999865
No 141
>cd00030 C2 C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions.
Probab=98.85 E-value=1.6e-08 Score=85.15 Aligned_cols=90 Identities=29% Similarity=0.462 Sum_probs=74.2
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|.|.|++|++++.. ......+|||.+.+.+ ....+|+++.++.||.||+.|.|.+.......|.|.|++.
T Consensus 1 l~v~i~~~~~l~~~------~~~~~~~~~v~v~~~~----~~~~~T~~~~~~~~P~w~~~~~~~~~~~~~~~l~i~v~~~ 70 (102)
T cd00030 1 LRVTVIEARNLPAK------DLNGKSDPYVKVSLGG----KQKFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVWDK 70 (102)
T ss_pred CEEEEEeeeCCCCc------CCCCCCCcEEEEEecc----CceEecceeCCCCCCcccceEEEEccCCCCCEEEEEEEec
Confidence 46899999988642 1234579999999876 3567899988889999999999998764456799999998
Q ss_pred CCCCCCCccEEEEEeCCCcc
Q 007473 549 SMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~ 568 (602)
+....+.++|++.+++..+.
T Consensus 71 ~~~~~~~~ig~~~~~l~~l~ 90 (102)
T cd00030 71 DRFSKDDFLGEVEIPLSELL 90 (102)
T ss_pred CCCCCCceeEEEEEeHHHhh
Confidence 87766899999999999887
No 142
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.84 E-value=9.3e-09 Score=112.38 Aligned_cols=183 Identities=15% Similarity=0.158 Sum_probs=118.7
Q ss_pred cCCCCCCCCCcccccccceE-eecc-ccCCCcceeee-cccccccccceeeecCCccCCCCCCC----CcCC-----CC-
Q 007473 394 TRVNSSNYKPMIGWIHGAQM-VALN-MQGYGKSLWLM-HGMFRANAGCGYVKKPNFLLKEGPDD----QVFD-----PK- 460 (602)
Q Consensus 394 ~RidSSN~~P~~~W~~G~Qm-VALN-~QT~D~~m~lN-~~~F~~NG~cGYVLKP~~lr~~~~~~----~~f~-----p~- 460 (602)
||+.--..||. |+-.-.. |+.+ .|+.-+-+.+. ..+|..|+--|.|.=|....+..... .... ..
T Consensus 206 T~v~r~tlnP~--fnEtf~f~v~~~~l~~~~L~l~V~~~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~ 283 (421)
T KOG1028|consen 206 TRVHRKTLNPV--FNETFRFEVPYEELSNRVLHLSVYDFDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEEL 283 (421)
T ss_pred eeeeecCcCCc--cccceEeecCHHHhccCEEEEEEEecCCcccccEEEEEEecCccccccccceeeeccccccCCcccc
Confidence 44545555563 4433333 2333 44444555544 46798888889988773222211100 0000 00
Q ss_pred C-C-------CCcceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEE
Q 007473 461 E-K-------LPVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFP 532 (602)
Q Consensus 461 ~-~-------~p~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~ 532 (602)
. + +|....|+|.|+.|++|+. .+..+..||||++.+........|+||.+.+++.||+|||+|.|.
T Consensus 284 ~gel~~sL~Y~p~~g~ltv~v~kar~L~~------~~~~~~~d~~Vk~~l~~~~~~~~kkkT~~~~~~~npv~nesf~F~ 357 (421)
T KOG1028|consen 284 AGELLLSLCYLPTAGRLTVVVIKARNLKS------MDVGGLSDPYVKVTLLDGDKRLSKKKTSVKKKTLNPVFNETFVFD 357 (421)
T ss_pred cceEEEEEEeecCCCeEEEEEEEecCCCc------ccCCCCCCccEEEEEecCCceeeeeeeecccCCCCCcccccEEEe
Confidence 0 1 2445789999999999963 245567899999999865544567899999999999999999998
Q ss_pred eecCCc--cEEEEEEEecCCCCCCCccEEEEEeCCCccCccEEE-EccCCCCCcc
Q 007473 533 LTIPEM--ALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAV-PLFDRKGEEL 584 (602)
Q Consensus 533 v~~pel--a~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~i-pL~d~~g~~l 584 (602)
|....+ +.|.++|||+|..+++++||++.+...+-..|-+|+ .+.+.-++++
T Consensus 358 vp~~~l~~~~l~l~V~d~d~~~~~~~iG~~~lG~~~~~~~~~hW~~m~~~p~~pv 412 (421)
T KOG1028|consen 358 VPPEQLAEVSLELTVWDHDTLGSNDLIGRCILGSDSTGEEVRHWQEMLNSPRKPV 412 (421)
T ss_pred CCHHHhheeEEEEEEEEcccccccceeeEEEecCCCCchHHHHHHHHHhCccCce
Confidence 875544 569999999999999999999888877633344443 3444334443
No 143
>cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG).
Probab=98.83 E-value=9.5e-09 Score=105.97 Aligned_cols=138 Identities=21% Similarity=0.265 Sum_probs=104.6
Q ss_pred CCCCcccccccccCCcccccCCcc--CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc-cchHHHHHHH
Q 007473 112 DMTAPLSHYFIYTGHNSYLIGNQF--SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT-PVELIKCLRA 188 (602)
Q Consensus 112 dM~~PLs~YfI~SSHNTYL~g~Ql--~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts-~i~f~dvi~a 188 (602)
--++||++|.+-.+||+|..+..- .+...-......|.+|.|-++||++..+ +...++||..... ..+|.|+++.
T Consensus 7 ~~~~~~~~it~~gtHNS~~~~~~~~~~~~nQ~~si~~QL~~GiR~l~ld~~~~~--~~~~lcH~~~~~~~~~~~~d~L~~ 84 (270)
T cd08588 7 LCDRTYDEYTFLTTHNSFANSEDAFFLAPNQEDDITKQLDDGVRGLMLDIHDAN--GGLRLCHSVCGLGDGGPLSDVLRE 84 (270)
T ss_pred cCCcccccceeEEeccCccccCCCcccccccCCCHHHHHHhCcceEeeeEEecC--CCEEEECCCccccCCccHHHHHHH
Confidence 357899999999999999887653 3333334567889999999999998753 4578999875544 7899999999
Q ss_pred HhhcccccCCCc-eEEEecCCCCHHHHHHHHHHHH-HHhhcccCCCCCCC--CCCCCChhhcc--ccEEEe
Q 007473 189 IKENAFSASPYP-VILTFEDHLNPHLQAKVAQMIT-QTFGAMLYSPESEC--LKEFPSPEELK--YRIIIS 253 (602)
Q Consensus 189 I~~~AF~~S~yP-vILSlE~Hcs~~qQ~~ma~~l~-~~~Gd~L~~~~~~~--~~~lPSP~~Lk--~KIlik 253 (602)
|+++.= +.|.- |||.||++.+...+ ..+.+++ ..||+.+|.|+... ...+|++++|. ||-||-
T Consensus 85 i~~fL~-~nP~EvV~l~l~~~~~~~~~-~~~~~~~~~gl~~~~y~p~~~~~~~~~WPTL~emi~~gkRlvv 153 (270)
T cd08588 85 VVDFLD-ANPNEVVTLFLEDYVSPGPL-LRSKLFRVAGLTDLVYVPDAMPWAGSDWPTLGEMIDANKRLLV 153 (270)
T ss_pred HHHHHH-hCCCcEEEEEEEeCCCcchH-HHHHHhhhcCccceEEcCCCCcCCCCCCCCHHHHHhcCCEEEE
Confidence 999864 34444 88999999987764 3344443 68999999886433 46899999998 554443
No 144
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
Probab=98.63 E-value=1e-07 Score=110.90 Aligned_cols=104 Identities=20% Similarity=0.318 Sum_probs=88.6
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
+.|+|.+++|++|+. .+.++-+||||++.+.+ +.-++|++++.++||+|||.+..+|.+.....+.+.|+
T Consensus 1040 G~l~I~~~~~~nl~~------~d~ng~sDpfv~~~ln~----k~vyktkv~KktlNPvwNEe~~i~v~~r~~D~~~i~v~ 1109 (1227)
T COG5038 1040 GYLTIMLRSGENLPS------SDENGYSDPFVKLFLNE----KSVYKTKVVKKTLNPVWNEEFTIEVLNRVKDVLTINVN 1109 (1227)
T ss_pred CcEEEEEeccCCCcc------cccCCCCCceEEEEecc----eecccccchhccCCCCccccceEeeeccccceEEEEEe
Confidence 568899999999963 45667789999999986 23689999999999999999999998877778999999
Q ss_pred ecCCCCCCCccEEEEEeCCCccCcc---EEEEccCCC
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLRPGI---HAVPLFDRK 580 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~~Gy---R~ipL~d~~ 580 (602)
|+|...+++.||++.++|..|.+|. ..|||-.+.
T Consensus 1110 Dwd~~~knd~lg~~~idL~~l~~~~~~n~~i~ldgk~ 1146 (1227)
T COG5038 1110 DWDSGEKNDLLGTAEIDLSKLEPGGTTNSNIPLDGKT 1146 (1227)
T ss_pred ecccCCCccccccccccHhhcCcCCccceeeeccCcc
Confidence 9999999999999999999999874 346765443
No 145
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.44 E-value=8.8e-08 Score=106.04 Aligned_cols=96 Identities=19% Similarity=0.234 Sum_probs=77.7
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCC--CcccccccCCCCCCCCeeccEEEEEeec----CCccE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPA--DKKMKSTKKKVDNWTPVWDDEFTFPLTI----PEMAL 540 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~--d~~k~kTkvi~nn~nPvWNEtf~F~v~~----pela~ 540 (602)
++|.|+|+-|.++.. .|.++.+||||.|++.+... -...+||++++.++||+|+|+|+|.|.. .+-|+
T Consensus 947 q~L~veVlhA~diip------LD~NGlSDPFVviEl~P~~~fp~v~~q~T~V~~rtLnPVfDE~FeFsVp~e~c~te~Am 1020 (1103)
T KOG1328|consen 947 QTLVVEVLHAKDIIP------LDSNGLSDPFVVIELIPKFRFPAVPVQKTKVVSRTLNPVFDETFEFSVPPEPCSTETAM 1020 (1103)
T ss_pred cchhhhhhccccccc------cCCCCCCCCeEEEEeccccccccchhhhhhhhhccccchhhhheeeecCccccccccce
Confidence 468888888887632 36678899999999874211 1235799999999999999999999863 24589
Q ss_pred EEEEEEecCCCCCCCccEEEEEeCCCcc
Q 007473 541 LRVEVRKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 541 Lrf~V~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
|.|+|.|+|..+.+||-|++.+-|+.+.
T Consensus 1021 ~~FTVMDHD~L~sNDFaGEA~L~Lg~vp 1048 (1103)
T KOG1328|consen 1021 LHFTVMDHDYLRSNDFAGEAFLELGDVP 1048 (1103)
T ss_pred EEEEeeccceecccccchHHHHhhCCCC
Confidence 9999999999999999999998887763
No 146
>PLN02352 phospholipase D epsilon
Probab=98.43 E-value=1.4e-06 Score=99.84 Aligned_cols=124 Identities=19% Similarity=0.323 Sum_probs=93.8
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
.++|.++|..|.-+...+.. ........||||+|.+.+. ...|| .|.-||+|||+|...+..+-.+-|.|+|
T Consensus 9 hg~l~~~i~~~~~~~~~~~~-~~~~~~~~~~y~tv~~~~~----~v~rt---~~~~~p~w~e~f~i~~ah~~~~~~~f~v 80 (758)
T PLN02352 9 HGTLEATIFDATPYTPPFPF-NCIFLNGKATYVTIKIGNK----KVAKT---SHEYDRVWNQTFQILCAHPLDSTITITL 80 (758)
T ss_pred ccceEEEEEEeeehhhcccc-cccccCCCCceEEEEeCCc----EEecC---CCCCCCccccceeEEeeeecCCcEEEEE
Confidence 56799999998732111110 0001122399999999862 34567 4456999999999888776446799999
Q ss_pred EecCCCCCCCccEEEEEeCCCccCcc----EEEEccCCCCCccCCeEEEEEEEEEEccccC
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRPGI----HAVPLFDRKGEELGSARLLMRFEFYEADVLP 602 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~Gy----R~ipL~d~~g~~l~~asL~v~i~~~e~~~~~ 602 (602)
+| ...+||.+.+|+..|..|- +|+|+.+.+|+|+.+++|.|+++|.+++..|
T Consensus 81 k~-----~~~~ig~~~~p~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 136 (758)
T PLN02352 81 KT-----KCSILGRFHIQAHQIVTEASFINGFFPLIMENGKPNPELKLRFMLWFRPAELEP 136 (758)
T ss_pred ec-----CCeEEEEEEEEHHHhhCCCcccceEEEcccCCCCCCCCCEEEEEEEEEEhhhCc
Confidence 98 2679999999999998883 6899999999999889999999999987654
No 147
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=98.29 E-value=1.7e-06 Score=96.27 Aligned_cols=109 Identities=28% Similarity=0.360 Sum_probs=84.7
Q ss_pred CCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecC---------------CccEEEEEEEe-cCCCCCCC
Q 007473 492 SPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIP---------------EMALLRVEVRK-YSMPEKDE 555 (602)
Q Consensus 492 s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~p---------------ela~Lrf~V~D-~d~~~~dd 555 (602)
+..|||++|...|.-.. ..++|++++.+.+|.|||.|.|.+..+ ++.-|++.+|+ .+....++
T Consensus 149 ~~~dp~~~v~~~g~~~~-~~~~T~~~kkt~~p~~~Ev~~f~~~~~~~~s~ks~~~~~~e~~~l~irv~lW~~~~~~~~~~ 227 (800)
T KOG2059|consen 149 GQCDPFARVTLCGPSKL-KEKKTKVKKKTTNPQFDEVFYFEVTREESYSKKSLFMPEEEDDMLEIRVDLWNDLNLVINDV 227 (800)
T ss_pred CCCCcceEEeecccchh-hccccceeeeccCcchhhheeeeeccccccccchhcCcccCCceeeEEEeeccchhhhhhhh
Confidence 44799999999874332 237899999999999999999998766 56679999999 55566699
Q ss_pred ccEEEEEeCCCccC-----ccEEEEccCCCCCc----cCCeEEEEEEEEEEccccC
Q 007473 556 FAGQTCLPVFQLRP-----GIHAVPLFDRKGEE----LGSARLLMRFEFYEADVLP 602 (602)
Q Consensus 556 ~lGq~~lpL~~L~~-----GyR~ipL~d~~g~~----l~~asL~v~i~~~e~~~~~ 602 (602)
|+|+..+|+..+++ |+-.+.-++ +|+. -..++|.+++.+.++.|||
T Consensus 228 FlGevrv~v~~~~~~s~p~~W~~Lqp~~-~g~~~~~~~~lGslrl~v~y~~D~Vlp 282 (800)
T KOG2059|consen 228 FLGEVRVPVDVLRQKSSPAAWYYLQPRP-NGEKSSDGGDLGSLRLNVTYTEDHVLP 282 (800)
T ss_pred hceeEEeehhhhhhccCccceEEEecCC-CcccCCCCCCccceeeeEEeeeceecc
Confidence 99999999999873 333444443 3332 2448999999999999998
No 148
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
Probab=98.01 E-value=1.5e-05 Score=93.38 Aligned_cols=93 Identities=20% Similarity=0.304 Sum_probs=73.6
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
+.|.|+|.+|.++.. ...-..+.+||||.+...+ ....||++++|.+||+|||+|-..+..- -.-|.+.||
T Consensus 436 GVv~vkI~sa~~lk~----~d~~i~~~vDpyit~~~~~----r~~gkT~v~~nt~nPvwNEt~Yi~lns~-~d~L~Lsly 506 (1227)
T COG5038 436 GVVEVKIKSAEGLKK----SDSTINGTVDPYITVTFSD----RVIGKTRVKKNTLNPVWNETFYILLNSF-TDPLNLSLY 506 (1227)
T ss_pred EEEEEEEeeccCccc----ccccccCCCCceEEEEecc----ccCCccceeeccCCccccceEEEEeccc-CCceeEEEE
Confidence 579999999999843 2212456789999999764 3455999999999999999988776521 125899999
Q ss_pred ecCCCCCCCccEEEEEeCCCcc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
|.+....|+++|...++|..|.
T Consensus 507 D~n~~~sd~vvG~~~l~L~~L~ 528 (1227)
T COG5038 507 DFNSFKSDKVVGSTQLDLALLH 528 (1227)
T ss_pred eccccCCcceeeeEEechHHhh
Confidence 9887888999999999998875
No 149
>cd08689 C2_fungal_Pkc1p C2 domain found in protein kinase C (Pkc1p) in Saccharomyces cerevisiae. This family is named after the protein kinase C in Saccharomyces cerevisiae, Pkc1p. Protein kinase C is a member of a family of Ser/Thr phosphotransferases that are involved in many cellular signaling pathways. PKC has two antiparallel coiled-coiled regions (ACC finger domain) (AKA PKC homology region 1 (HR1)/ Rho binding domain) upstream of the C2 domain and two C1 domains downstream. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains, like those of PKC, are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that
Probab=97.90 E-value=3e-05 Score=68.26 Aligned_cols=87 Identities=15% Similarity=0.180 Sum_probs=62.0
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEec
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKY 548 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~ 548 (602)
|+|+|.+++++... ......+.+||||.|.+.+ ..+.||++ +-||.|||+|+|.|. ...-+.+.|||.
T Consensus 1 L~I~V~~~RdvdH~---~~~~~~~~~etyV~IKved----~~kaRTr~---srnd~WnE~F~i~Vd--k~nEiel~VyDk 68 (109)
T cd08689 1 LTITITSARDVDHI---ASPRFSKRPETYVSIKVED----VERARTKP---SRNDRWNEDFEIPVE--KNNEEEVIVYDK 68 (109)
T ss_pred CEEEEEEEecCccc---cchhhccCCCcEEEEEECC----EEEEeccC---CCCCcccceEEEEec--CCcEEEEEEEeC
Confidence 57889999888432 1111345689999999875 34778887 479999999999994 245699999997
Q ss_pred CCCCCCCccEEEEEeCCCcc
Q 007473 549 SMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~ 568 (602)
... ..-.+|..-++++.|.
T Consensus 69 ~~~-~~~Pi~llW~~~sdi~ 87 (109)
T cd08689 69 GGD-QPVPVGLLWLRLSDIA 87 (109)
T ss_pred CCC-eecceeeehhhHHHHH
Confidence 532 2446777777766654
No 150
>KOG1031 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=97.81 E-value=6e-05 Score=82.20 Aligned_cols=121 Identities=16% Similarity=0.253 Sum_probs=91.4
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeec-cEEEEEeecCCc--cEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWD-DEFTFPLTIPEM--ALLRV 543 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWN-Etf~F~v~~pel--a~Lrf 543 (602)
++|.|+|..|+.||...+.. ...|.||+|.+.. ..+||.+...++||.|| +-|.|.|...++ .-|.+
T Consensus 3 gkl~vki~a~r~lpvmdkas-----d~tdafveik~~n-----~t~ktdvf~kslnp~wnsdwfkfevddadlqdeplqi 72 (1169)
T KOG1031|consen 3 GKLGVKIKAARHLPVMDKAS-----DLTDAFVEIKFAN-----TTFKTDVFLKSLNPQWNSDWFKFEVDDADLQDEPLQI 72 (1169)
T ss_pred CcceeEEEeccCCccccccc-----ccchheeEEEecc-----cceehhhhhhhcCCcccccceEEecChhhhccCCeeE
Confidence 46899999999998653221 2368899999874 57899999999999998 569999987776 36999
Q ss_pred EEEecCCCCCCCccEEEEEeCCCcc----------Cc---cEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLR----------PG---IHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~----------~G---yR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
++.|+|..+.+|-||.+.|.++-|. .| --|+|.+|.--..-..-.+.|++++..
T Consensus 73 ~lld~dtysandaigkv~i~idpl~~e~aaqavhgkgtvisgw~pifdtihgirgeinvivkvdlfn 139 (1169)
T KOG1031|consen 73 RLLDHDTYSANDAIGKVNIDIDPLCLEEAAQAVHGKGTVISGWFPIFDTIHGIRGEINVIVKVDLFN 139 (1169)
T ss_pred EEecccccccccccceeeeccChHHHHhHHhhhcCCceEEeeeeecceecccccceeEEEEEEeehh
Confidence 9999999888999999999988663 23 247888874322222346677776543
No 151
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.80 E-value=8.4e-05 Score=83.20 Aligned_cols=119 Identities=19% Similarity=0.246 Sum_probs=90.5
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVR 546 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~ 546 (602)
..|.|+|..|++||.. +..+..|||+.|.+.. ....||.+|..++-|.|.|.|.|.+.. ....|.|-||
T Consensus 5 ~sl~vki~E~knL~~~------~~~g~~D~yC~v~lD~----E~v~RT~tv~ksL~PF~gEe~~~~iP~-~F~~l~fYv~ 73 (800)
T KOG2059|consen 5 QSLKVKIGEAKNLPSY------GPSGMRDCYCTVNLDQ----EEVCRTATVEKSLCPFFGEEFYFEIPR-TFRYLSFYVW 73 (800)
T ss_pred cceeEEEeecccCCCC------CCCCCcCcceEEeecc----hhhhhhhhhhhhcCCccccceEEecCc-ceeeEEEEEe
Confidence 4589999999999742 3345689999999864 356789999999999999999998853 3556999999
Q ss_pred ecCCCCCCCccEEEEEeCCCcc--CccE-EEEc--cCCCCCccCCeEEEEEEEEEEcc
Q 007473 547 KYSMPEKDEFAGQTCLPVFQLR--PGIH-AVPL--FDRKGEELGSARLLMRFEFYEAD 599 (602)
Q Consensus 547 D~d~~~~dd~lGq~~lpL~~L~--~GyR-~ipL--~d~~g~~l~~asL~v~i~~~e~~ 599 (602)
|.| .++|+.||.++|.-..|. +|.- |+.| -|++-+. .+.+-+.+++.|+.
T Consensus 74 D~d-~~~D~~IGKvai~re~l~~~~~~d~W~~L~~VD~dsEV--QG~v~l~l~~~e~~ 128 (800)
T KOG2059|consen 74 DRD-LKRDDIIGKVAIKREDLHMYPGKDTWFSLQPVDPDSEV--QGKVHLELALTEAI 128 (800)
T ss_pred ccc-cccccccceeeeeHHHHhhCCCCccceeccccCCChhh--ceeEEEEEEecccc
Confidence 999 788999999999877664 4543 3445 3555554 35777777777653
No 152
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.68 E-value=0.00011 Score=81.05 Aligned_cols=103 Identities=28% Similarity=0.409 Sum_probs=81.0
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCC-Cc-ccccccCCCCCCCCeeccEEEEEeec---CCccEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPA-DK-KMKSTKKKVDNWTPVWDDEFTFPLTI---PEMALL 541 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~-d~-~k~kTkvi~nn~nPvWNEtf~F~v~~---pela~L 541 (602)
.+++|+|+.|.+|.+. + .+.-.|||+|.+.|... |+ .|+.|++..||..|.+||+|+|-+.. |+---|
T Consensus 1125 hkvtvkvvaandlkwq---t----sgmFrPFVEV~ivGP~lsDKKRK~~TKtKsnnWaPKyNEtF~f~Lg~e~~Pe~YEL 1197 (1283)
T KOG1011|consen 1125 HKVTVKVVAANDLKWQ---T----SGMFRPFVEVHIVGPHLSDKKRKFSTKTKSNNWAPKYNETFHFFLGNEGGPEHYEL 1197 (1283)
T ss_pred ceEEEEEEecccccch---h----ccccccceEEEEecCcccchhhhccccccCCCcCcccCceeEEEeccCCCCceEEE
Confidence 5689999999998663 1 23346799999998543 32 34578888899999999999998763 555679
Q ss_pred EEEEEecCCCCCCCccEEEEEeCCCcc-Ccc--EEEEc
Q 007473 542 RVEVRKYSMPEKDEFAGQTCLPVFQLR-PGI--HAVPL 576 (602)
Q Consensus 542 rf~V~D~d~~~~dd~lGq~~lpL~~L~-~Gy--R~ipL 576 (602)
.|+|+|+.....|..+|.++++|.++. .|- -|+||
T Consensus 1198 ~~~VKDYCFAReDRvvGl~VlqL~~va~kGS~a~W~pL 1235 (1283)
T KOG1011|consen 1198 QFCVKDYCFAREDRVVGLAVLQLRSVADKGSCACWVPL 1235 (1283)
T ss_pred EEeehhheeecccceeeeeeeehhhHhhcCceeEeeec
Confidence 999999998777899999999999884 352 57787
No 153
>KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms]
Probab=97.67 E-value=3.7e-05 Score=89.62 Aligned_cols=96 Identities=17% Similarity=0.232 Sum_probs=79.2
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEE-eecCCc--cEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFP-LTIPEM--ALLRV 543 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~-v~~pel--a~Lrf 543 (602)
.+|+|-|.-+++|+.- ..+..+||||+.++.+.|....|+||++++.+.||.|||.+.+. +....+ ..|.+
T Consensus 1524 ~~LtImV~H~K~L~~L------qdg~~P~pyVK~YLlPdp~k~sKRKTKvvrkt~~PTfnE~LvY~g~p~~~l~qReLQ~ 1597 (1639)
T KOG0905|consen 1524 GTLTIMVMHAKGLALL------QDGQDPDPYVKTYLLPDPRKTSKRKTKVVRKTRNPTFNEMLVYDGFPKEILQQRELQV 1597 (1639)
T ss_pred ceEEEEhhhhcccccc------cCCCCCCcceeEEecCCchHhhhhhhccccccCCCchhhheeecCCchhhhhhheeee
Confidence 4688888888888531 22355899999999998888899999999999999999999987 332222 46899
Q ss_pred EEEecCCCCCCCccEEEEEeCCCcc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
.||..+....+.|+|.+++||..+.
T Consensus 1598 sVls~~~~~en~~lg~v~i~L~~~~ 1622 (1639)
T KOG0905|consen 1598 SVLSNGGLLENVFLGGVNIPLLKVD 1622 (1639)
T ss_pred eeecccceeeeeeeeeeecchhhcc
Confidence 9999988888999999999998864
No 154
>cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing. This subfamily corresponds to the catalytic domain present in uncharacterized metazoan Drosophila melanogaster CG14945-like proteins, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI
Probab=97.58 E-value=0.00049 Score=71.48 Aligned_cols=136 Identities=18% Similarity=0.270 Sum_probs=95.1
Q ss_pred CCcccccccccCCcccccCCccC---------CCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEeecccccccchHH
Q 007473 114 TAPLSHYFIYTGHNSYLIGNQFS---------SDCSDVPITKALKRGVRVIELDLWPNS-AKDDVLVLHGRTLTTPVELI 183 (602)
Q Consensus 114 ~~PLs~YfI~SSHNTYL~g~Ql~---------g~Ss~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~ 183 (602)
+.||++=+|--|||+.--+-... +..--.....=|..|.|-+.|.|.-.+ +++.-.++||-.. -.+|.
T Consensus 6 ~~~l~~l~iPGtHdS~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRylDlRv~~~~~~~~~~~~~Hg~~~--~~~l~ 83 (276)
T cd08622 6 NLRIKDLFIPGTHNSAAYDTNSNANESLVDKYLLTQDLDIWTQLVHGIRYLDLRVGYYPDSPDNFWINHDLVR--IVPLL 83 (276)
T ss_pred CceeeeeeccccchhhhcCCCCcccchhhhhhhcccCCcHHHHHhhCCeEEEEEeeccCCCCCcEEEECcccc--cccHH
Confidence 45999999999999875432211 111122345678899999999996432 2245678887543 38999
Q ss_pred HHHHHHhhcccccCCCceEEEecCCCC------HHHHHHHHHHHHHHhhcccCCCCCCCCCCCCChhhc--cccEEEec
Q 007473 184 KCLRAIKENAFSASPYPVILTFEDHLN------PHLQAKVAQMITQTFGAMLYSPESECLKEFPSPEEL--KYRIIIST 254 (602)
Q Consensus 184 dvi~aI~~~AF~~S~yPvILSlE~Hcs------~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~L--k~KIlik~ 254 (602)
+|++.|+++.=.. .=-|||.+ .|.. ++.-..+.+++.+.|||.|+.+.. ....-|+.++| +||.+|-.
T Consensus 84 ~vL~~v~~Fl~~~-~EvVil~~-~~f~~~~~~~~~~h~~l~~~l~~~~g~~l~~~~~-~~~~~~TL~~l~~~gkrViv~ 159 (276)
T cd08622 84 TVLNDVRNFVQNT-GEIVVLDF-HRFPVGFHSHPEVHDELISLLRQELGDLILRRSR-NYGWGPTLSEIWARRKRVIIC 159 (276)
T ss_pred HHHHHHHHHHHHC-CCEEEEEE-EccCcCCCCCHHHHHHHHHHHHHHhccceecCcc-cccccCcHHHHHhcCCEEEEE
Confidence 9999999975444 55678877 4443 577888999999999999998753 23456899996 56665543
No 155
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.52 E-value=0.00014 Score=75.19 Aligned_cols=104 Identities=16% Similarity=0.188 Sum_probs=77.8
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCcc--EEEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMA--LLRVEV 545 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela--~Lrf~V 545 (602)
.|.|+++.+..+ ..+|.++-+||||.+.+...-....++||.+.+++.||+||+.|.|.+...+|+ -+.+.|
T Consensus 234 ~l~vt~iRc~~l------~ssDsng~sDpyvS~~l~pdv~~~fkkKt~~~K~t~~p~fd~~~~~~i~pgdLa~~kv~lsv 307 (362)
T KOG1013|consen 234 GLIVTIIRCSHL------ASSDSNGYSDPYVSQRLSPDVGKKFKKKTQQKKKTLNPEFDEEFFYDIGPGDLAYKKVALSV 307 (362)
T ss_pred ceEEEEEEeeee------eccccCCCCCccceeecCCCcchhhcccCcchhccCCccccccccccCCccchhcceEEEee
Confidence 377888876655 235677789999999887433334577999999999999999999999888886 488899
Q ss_pred EecCCCCCCCccEEEEEeCCCccCccEEEEccCCCCCc
Q 007473 546 RKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEE 583 (602)
Q Consensus 546 ~D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~d~~g~~ 583 (602)
||++....++++|-.. ..+||--++++..|.+
T Consensus 308 gd~~~G~s~d~~GG~~------~g~~rr~~v~~h~gr~ 339 (362)
T KOG1013|consen 308 GDYDIGKSNDSIGGSM------LGGYRRGEVHKHWGRC 339 (362)
T ss_pred cccCCCcCccCCCccc------ccccccchhhcCcccc
Confidence 9999776788888532 3345655666655554
No 156
>cd08587 PI-PLCXDc_like Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins. This family corresponds to the catalytic domain present in phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD) which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs mainly found in eukaryota. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs and their bacterial homologs contain a single TIM-barrel type catalytic domain, X domain, which is more closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be
Probab=97.51 E-value=0.00075 Score=70.45 Aligned_cols=136 Identities=18% Similarity=0.232 Sum_probs=94.5
Q ss_pred CCcccccccccCCcccccCCccCCC---------------------CChHHHHHHHhcCCcEEEEEeecCC-CCCCceEe
Q 007473 114 TAPLSHYFIYTGHNSYLIGNQFSSD---------------------CSDVPITKALKRGVRVIELDLWPNS-AKDDVLVL 171 (602)
Q Consensus 114 ~~PLs~YfI~SSHNTYL~g~Ql~g~---------------------Ss~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~ 171 (602)
+.||.+..|-.|||+.--+-.-.+. .--.....=|..|+|-+.|++.-.+ .++.-.++
T Consensus 6 ~~~l~~l~iPGtHds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiR~fDlR~~~~~~~~~~~~~~ 85 (288)
T cd08587 6 DLPLRDLVIPGSHDSGMYTINGDSPVGPDQPEFGKIAKGIVRKWSVTQSLSIYDQLEAGIRYFDLRVAYKPDSENKLYFV 85 (288)
T ss_pred hCchhheecccccccceeEcCCCCCCCCcchhhhhhHHHHHHHHhhccCcCHHHHHhhCceEEEEEEeecCCCCCeEEEE
Confidence 5799999999999986433221111 1111235667899999999995432 12456788
Q ss_pred ecccccccchHHHHHHHHhhcccccCCCceEEEecC-----CCCHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCChhhc
Q 007473 172 HGRTLTTPVELIKCLRAIKENAFSASPYPVILTFED-----HLNPHLQAKVAQMITQTFGAMLYSPESECLKEFPSPEEL 246 (602)
Q Consensus 172 HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~-----Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~L 246 (602)
||-. +-.+|.+|++.|+++.=....=-|||.++. .++.++-..+.+.|.++||+.++.+ .....-|+.++|
T Consensus 86 H~~~--~~~~~~~~l~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~tL~~l 161 (288)
T cd08587 86 HGLY--SGEPVDEVLEDVNDFLDEHPKEVVILDFNHFYGMDDKSPEDHEKLVELLEDIFGDKLCPR--DSDLLDVTLADL 161 (288)
T ss_pred eecc--cccCHHHHHHHHHHHHHhCCCcEEEEEEEccccCCcccHHHHHHHHHHHHHHhccccCCC--ccccCCCcHHHH
Confidence 8732 238899999999997544444568888863 3345788889999999999999975 223466789999
Q ss_pred c--ccEEEe
Q 007473 247 K--YRIIIS 253 (602)
Q Consensus 247 k--~KIlik 253 (602)
. ||-+|-
T Consensus 162 ~~~gk~viv 170 (288)
T cd08587 162 WESGKRVIV 170 (288)
T ss_pred HhCCCeEEE
Confidence 8 775443
No 157
>cd04012 C2A_PI3K_class_II C2 domain first repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. Class II PIK3s act downstream of receptors for growth factors, integrins, and chemokines. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that c
Probab=97.14 E-value=0.0031 Score=60.87 Aligned_cols=107 Identities=22% Similarity=0.266 Sum_probs=72.6
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCc-ccccccCC--CCCC--CCeeccEEEEEeec---CC
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADK-KMKSTKKK--VDNW--TPVWDDEFTFPLTI---PE 537 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~-~k~kTkvi--~nn~--nPvWNEtf~F~v~~---pe 537 (602)
...+.|+|.++.+++..... ...|.||++.+.-....- ....|+.. .+.+ .+.|||.++|++.. |-
T Consensus 7 ~~~~~i~v~~~h~~~~~~~~------~~~~~~v~~~l~~g~~~L~~~~~T~~~~~~~~f~~~~~Wnewl~F~i~i~~LPr 80 (171)
T cd04012 7 TDLLSVTVSSLHRIPPTWVQ------SFEDFYLSCSLYHGGRLLCSPVTTKPVKITKSFFPRVVWDEWIEFPIPVCQLPR 80 (171)
T ss_pred cccEEEEEEEeecCChHHhh------ccccEEEEEEEEECCEECcCceeccccccccCccccccccceEECccchhcCCh
Confidence 34589999999988753211 125779999887422111 12234432 2332 57899999999764 44
Q ss_pred ccEEEEEEEecCCCC---------CCCccEEEEEeCC----CccCccEEEEccC
Q 007473 538 MALLRVEVRKYSMPE---------KDEFAGQTCLPVF----QLRPGIHAVPLFD 578 (602)
Q Consensus 538 la~Lrf~V~D~d~~~---------~dd~lGq~~lpL~----~L~~GyR~ipL~d 578 (602)
.|.|.|++|+..... ....||++.++|- .|++|...+.|.-
T Consensus 81 earL~itl~~~~~~~~~~~~~~~~~~~~lG~~~~~LFd~~~~L~~G~~~L~lW~ 134 (171)
T cd04012 81 ESRLVLTLYGTTSSPDGGSNKQRMGPEELGWVSLPLFDFRGVLRQGSLLLGLWP 134 (171)
T ss_pred hHEEEEEEEEEecCCccccccccccceEEEEEeEeeEcchhhhccCCEEEEecc
Confidence 489999999966433 3568999999985 4789999998863
No 158
>cd08398 C2_PI3K_class_I_alpha C2 domain present in class I alpha phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, alpha isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a c
Probab=97.12 E-value=0.0057 Score=58.27 Aligned_cols=101 Identities=18% Similarity=0.238 Sum_probs=68.0
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCc-ccccccCCCCCCCCeeccEEEEEeecCC---ccEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADK-KMKSTKKKVDNWTPVWDDEFTFPLTIPE---MALLR 542 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~-~k~kTkvi~nn~nPvWNEtf~F~v~~pe---la~Lr 542 (602)
..++|+|+++.++... ...|.||++++......- ....|+.+.. -++.|||.++|++...+ .|.|.
T Consensus 8 ~~~~v~i~~~~~~~~~---------~~~~l~V~v~l~~g~~~L~~pv~T~~v~~-~~~~WnEwL~fpI~i~dLPr~ArL~ 77 (158)
T cd08398 8 SNLRIKILCATYVNVN---------DIDKIYVRTGIYHGGEPLCDNVNTQRVPC-SNPRWNEWLDYDIYIPDLPRSARLC 77 (158)
T ss_pred CCeEEEEEeeccCCCC---------CcCeEEEEEEEEECCEEccCeeEecccCC-CCCccceeEEcccchhcCChhheEE
Confidence 3589999999987542 124779999887421111 1123443332 46899999999987544 48999
Q ss_pred EEEEecCCCC----CCCccEEEEEeCC----CccCccEEEEcc
Q 007473 543 VEVRKYSMPE----KDEFAGQTCLPVF----QLRPGIHAVPLF 577 (602)
Q Consensus 543 f~V~D~d~~~----~dd~lGq~~lpL~----~L~~GyR~ipL~ 577 (602)
|+||+..... ....+|.+.++|- .|++|...+.|.
T Consensus 78 iti~~~~~~~~~k~~~~~iG~~ni~LFd~~~~Lr~G~~~L~lW 120 (158)
T cd08398 78 LSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLW 120 (158)
T ss_pred EEEEEEecccCCCCceEEEEEEEEEEECCCChhhCCCEEEEEE
Confidence 9999965321 1246999999975 478898777664
No 159
>cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1. This subfamily corresponds to the catalytic domain present in a group of phosphatidylinositol-specific phospholipase C X domain containing 1 (PI-PLCXD1), 2 (PI-PLCXD2) and 3 (PI-PLCXD3), which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs found in vertebrates. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, members in this group contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to
Probab=97.08 E-value=0.0052 Score=64.34 Aligned_cols=135 Identities=23% Similarity=0.280 Sum_probs=89.0
Q ss_pred CCcccccccccCCcccc---cCCccCCC------------------------CChHHHHHHHhcCCcEEEEEeecCCCCC
Q 007473 114 TAPLSHYFIYTGHNSYL---IGNQFSSD------------------------CSDVPITKALKRGVRVIELDLWPNSAKD 166 (602)
Q Consensus 114 ~~PLs~YfI~SSHNTYL---~g~Ql~g~------------------------Ss~e~Y~~aL~~GCRcvElD~WdG~~~~ 166 (602)
+.||.+..|--|||+-- ..+.-.|. .--.....-|..|.|-+.|.+--.++++
T Consensus 7 ~~~L~~l~iPGsHdS~ty~~~~~s~~~pd~~~~~~~~~~~~~~~~~v~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~ 86 (290)
T cd08616 7 DKPLTNLAIPGSHDSFTYSIDKQSPVSPDQSVQNLVKVFPCIFKKIVKKWSKTQSLTITEQLEAGIRYFDLRIATKPKDN 86 (290)
T ss_pred hCchheEecCCCCCccceecCCCCCCCchhhhhhhhhhcccchhhhhhHHhhCCCCcHHHHHhcCceEEEEEecccCCCC
Confidence 36999999999999642 22211111 1111234567899999999996433234
Q ss_pred CceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCC---CHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCh
Q 007473 167 DVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHL---NPHLQAKVAQMITQTFGAMLYSPESECLKEFPSP 243 (602)
Q Consensus 167 ~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hc---s~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP 243 (602)
+-.++||-. +. ++.||++.|+++.=....=-|||.+. |+ +.++-..+.+.|+++||+.|+.+.. ...-|+.
T Consensus 87 ~~~~~Hg~~--~~-~~~~~L~~i~~fl~~~p~Evvil~~~-~~~~~~~~~~~~l~~~l~~~fg~~l~~~~~--~~~~~tL 160 (290)
T cd08616 87 DLYFVHGLY--GI-LVKEILEEINDFLTEHPKEVVILDFN-HFYGMTEEDHEKLLKMIKSIFGKKLCPRDP--DLLNVTL 160 (290)
T ss_pred cEEEEEecc--ch-hHHHHHHHHHHHHHHCCCcEEEEEEE-ccCCCCHHHHHHHHHHHHHHhcccccCCCC--CcCcCcH
Confidence 568899842 22 99999999999753333445788875 43 3455567888999999999985432 1345789
Q ss_pred hhcc--c-cEEEec
Q 007473 244 EELK--Y-RIIIST 254 (602)
Q Consensus 244 ~~Lk--~-KIlik~ 254 (602)
++|. | +|||-.
T Consensus 161 ~~l~~~~krVIi~y 174 (290)
T cd08616 161 EYLWEKGYQVIVFY 174 (290)
T ss_pred HHHHhCCCEEEEEE
Confidence 9997 3 355544
No 160
>cd08693 C2_PI3K_class_I_beta_delta C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, beta and delta isoforms of PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Ty
Probab=97.03 E-value=0.0079 Score=58.20 Aligned_cols=103 Identities=18% Similarity=0.242 Sum_probs=69.6
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCc-ccccccCCCCCCCCeeccEEEEEeec---CCccEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADK-KMKSTKKKVDNWTPVWDDEFTFPLTI---PEMALLR 542 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~-~k~kTkvi~nn~nPvWNEtf~F~v~~---pela~Lr 542 (602)
..++|+|+++.++... ....+.||++.+......- ....|+.+.-+-.+.|||.++|++.. |-.|.|.
T Consensus 8 ~~f~i~i~~~~~~~~~--------~~~~~l~V~~~lyhG~~~L~~p~~T~~~~~~~~~~Wnewl~F~I~i~dLPr~ArLc 79 (173)
T cd08693 8 EKFSITLHKISNLNAA--------ERTMKVGVQAGLFHGGESLCKTVKTSEVSGKNDPVWNETLEFDINVCDLPRMARLC 79 (173)
T ss_pred CCEEEEEEEeccCccC--------CCCceEEEEEEEEECCEEccCceEccccCCCCccccceeEEcccchhcCChhHeEE
Confidence 3589999999988530 1225668988876321111 12345444434569999999998865 4458999
Q ss_pred EEEEecCCCC----------------CCCccEEEEEeCC----CccCccEEEEcc
Q 007473 543 VEVRKYSMPE----------------KDEFAGQTCLPVF----QLRPGIHAVPLF 577 (602)
Q Consensus 543 f~V~D~d~~~----------------~dd~lGq~~lpL~----~L~~GyR~ipL~ 577 (602)
|.||+..... ....||++.++|- .|++|...+.|.
T Consensus 80 iti~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~n~~LFd~~~~Lr~G~~~L~lW 134 (173)
T cd08693 80 FAIYEVSKKAKGKRSRKNQTKKKKKKDDNPIAWVNTMVFDYKGQLKTGDHTLYMW 134 (173)
T ss_pred EEEEEecccccccccccccccccccCcceEEEEEeEEEEcccchhhcCCeEEEec
Confidence 9999965321 1368999999875 478898777664
No 161
>cd08683 C2_C2cd3 C2 domain found in C2 calcium-dependent domain containing 3 (C2cd3) proteins. C2cd3 is a novel C2 domain-containing protein specific to vertebrates. C2cd3 functions in regulator of cilia formation, Hedgehog signaling, and mouse embryonic development. Mutations in C2cd3 mice resulted in lethality in some cases and exencephaly, a twisted body axis, and pericardial edema in others. The presence of calcium-dependent lipid-binding domains in C2cd3 suggests a potential role in vesicular transport. C2cd3 is also an interesting candidate for ciliopathy because of its orthology to certain cilia-related genetic disease loci on chromosome. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances inc
Probab=96.97 E-value=0.0018 Score=59.01 Aligned_cols=73 Identities=19% Similarity=0.373 Sum_probs=54.6
Q ss_pred CCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeec----C-----------CccEEEEEEEecCCCC------
Q 007473 494 PQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTI----P-----------EMALLRVEVRKYSMPE------ 552 (602)
Q Consensus 494 ~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~----p-----------ela~Lrf~V~D~d~~~------ 552 (602)
.++||+|.+.-.+.+ ..++|+++.++|-|.|+..++|.+.. . +.+-+.|.||.....+
T Consensus 33 VN~yv~i~lSFl~~~-e~r~TrtVArSFcPeF~Hh~Efpc~lv~~~~~Ge~~sLAElLe~~eiil~vwHr~~~s~~~~~~ 111 (143)
T cd08683 33 VNSYVTIHLSFLPEK-ELRRTRTVARSFCPEFNHHVEFPCNLVVQRNSGEAISLAELLESAEIILEVWHRNPKSAGDTIK 111 (143)
T ss_pred cceEEEEEeccCCCC-ceeeccchhhhcCCCccceEEEecccEEEcCCCccccHHHHhhcceEEeeeeecCCccccceec
Confidence 578999998766543 46789999999999999999998641 0 2256889999876432
Q ss_pred ----CCCccEEEEEeCCCc
Q 007473 553 ----KDEFAGQTCLPVFQL 567 (602)
Q Consensus 553 ----~dd~lGq~~lpL~~L 567 (602)
+|-+||.+.||+..|
T Consensus 112 ~~~~~DilLG~v~IPl~~L 130 (143)
T cd08683 112 IETSGDILLGTVKIPLRDL 130 (143)
T ss_pred cCcCCcEEEEEEEeeHHHH
Confidence 344678888887766
No 162
>cd08380 C2_PI3K_like C2 domain present in phosphatidylinositol 3-kinases (PI3Ks). C2 domain present in all classes of PI3Ks. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm
Probab=96.96 E-value=0.0083 Score=56.80 Aligned_cols=103 Identities=25% Similarity=0.273 Sum_probs=69.3
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcc-cccccCCCCCCCCeeccEEEEEeecCC---ccEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKK-MKSTKKKVDNWTPVWDDEFTFPLTIPE---MALLRV 543 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~-k~kTkvi~nn~nPvWNEtf~F~v~~pe---la~Lrf 543 (602)
.++|+|....+.... .....+.||++++.-...... ...|+.+...-++.|||.++|++...+ .|.|.|
T Consensus 9 ~~~i~i~~~~~~~~~-------~~~~~~l~V~~~l~~g~~~l~~~~~t~~~~~~~~~~Wne~l~F~i~~~~LP~~arL~i 81 (156)
T cd08380 9 NLRIKIHGITNINLL-------DSEDLKLYVRVQLYHGGEPLCPPQSTKKVPFSTSVTWNEWLTFDILISDLPREARLCL 81 (156)
T ss_pred CeEEEEEeecccccc-------CCCceeEEEEEEEEECCEEccCceeccCCcCCCCCcccceeEccchhhcCChhheEEE
Confidence 478888877766420 112356789988774221112 223433333357999999999976544 489999
Q ss_pred EEEecCCCC--CCCccEEEEEeCC----CccCccEEEEcc
Q 007473 544 EVRKYSMPE--KDEFAGQTCLPVF----QLRPGIHAVPLF 577 (602)
Q Consensus 544 ~V~D~d~~~--~dd~lGq~~lpL~----~L~~GyR~ipL~ 577 (602)
+||+.+... ....||++.+||- .|++|...+.|.
T Consensus 82 tl~~~~~~~~~~~~~iG~~~~~lFd~~~~L~~G~~~l~lW 121 (156)
T cd08380 82 SIYAVSEPGSKKEVPLGWVNVPLFDYKGKLRQGMITLNLW 121 (156)
T ss_pred EEEEEecCCCCcceEEEEEeEEeEcccCcEecCCEEEecc
Confidence 999976443 3579999999986 478999988885
No 163
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.81 E-value=0.00034 Score=72.48 Aligned_cols=98 Identities=15% Similarity=0.207 Sum_probs=76.6
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC---ccEEEE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE---MALLRV 543 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe---la~Lrf 543 (602)
..+..+|..|.+|.. .+.++..||||+..+...-....+.+|++..|+.||.|||+..+.....+ ...+|+
T Consensus 93 ~~~~~tl~~a~~lk~------~~~~~~~d~~~~~~llpga~kl~slr~~t~~n~lN~~w~etev~~~i~~~~~~~K~~Rk 166 (362)
T KOG1013|consen 93 RMLDTTLDRAKGLKP------MDINGLADPYVKLHLLPGAGKLNSLRTKTTRNTLNPEWNETEVYEGITDDDTHLKVLRK 166 (362)
T ss_pred hhcceeechhcccch------hhhhhhcchHHhhhcccchhhhhhhhHHhhccCcCcceeccceecccccchhhhhhhhe
Confidence 457888888888632 35567789999998875444455688999999999999998877654333 246899
Q ss_pred EEEecCCCCCCCccEEEEEeCCCccCc
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQLRPG 570 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~L~~G 570 (602)
.|.|.+....++++||..+++..|.+-
T Consensus 167 ~vcdn~~~~~~~sqGq~r~~lkKl~p~ 193 (362)
T KOG1013|consen 167 VVCDNDKKTHNESQGQSRVSLKKLKPL 193 (362)
T ss_pred eeccCcccccccCcccchhhhhccChh
Confidence 999999888899999999998888653
No 164
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=96.67 E-value=0.00087 Score=75.28 Aligned_cols=83 Identities=18% Similarity=0.381 Sum_probs=58.2
Q ss_pred ccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCC---------------------------------C---CCC
Q 007473 512 KSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMP---------------------------------E---KDE 555 (602)
Q Consensus 512 ~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~---------------------------------~---~dd 555 (602)
+-|.+.+.++||.|+|.|.|.|..-.--.+.+-+||+|.- + .||
T Consensus 179 katsvk~~TLnPkW~EkF~F~IeDv~tDqfHlDIWDHDDe~sv~dAvs~LNeV~G~kG~GRyFKqv~qSARans~d~tDD 258 (1103)
T KOG1328|consen 179 KATSVKKKTLNPKWSEKFQFTIEDVQTDQFHLDIWDHDDEESVLDAVSSLNEVTGFKGIGRYFKQVTQSARANSDDCTDD 258 (1103)
T ss_pred hhcccccccCCcchhhheeeehhccccceeeeecccCCccHHHHHHHHHHhhhhcchhHHHHHHHHHHHHhcCCCccccc
Confidence 4577778889999999999998755455688999998742 1 289
Q ss_pred ccEEEEEeCCCccC-cc-EEEEccCCCCCccCCeEEEEEEE
Q 007473 556 FAGQTCLPVFQLRP-GI-HAVPLFDRKGEELGSARLLMRFE 594 (602)
Q Consensus 556 ~lGq~~lpL~~L~~-Gy-R~ipL~d~~g~~l~~asL~v~i~ 594 (602)
|+|...+||..+.+ |. +|.-|--.+.+.-..+.+-+++.
T Consensus 259 FLGciNipl~EiP~~Gld~WFkLepRS~~S~VqG~~~Lklw 299 (1103)
T KOG1328|consen 259 FLGCINIPLAEIPPDGLDQWFKLEPRSDKSKVQGQVKLKLW 299 (1103)
T ss_pred cccccccchhcCCcchHHHHhccCcccccccccceEEEEEE
Confidence 99999999999975 53 56666444433333334444433
No 165
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]
Probab=96.64 E-value=0.0015 Score=75.95 Aligned_cols=94 Identities=17% Similarity=0.187 Sum_probs=75.9
Q ss_pred CcceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEE
Q 007473 464 PVKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRV 543 (602)
Q Consensus 464 p~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf 543 (602)
|+...++|-|+.|.+|.. .|.++..||||.+.+.+. ...-++..+.+++||+|++-|++....|-...+.+
T Consensus 610 pi~~LvrVyvv~A~~L~p------~D~ng~adpYv~l~lGk~---~~~d~~~yip~tlnPVfgkmfel~~~lp~ek~l~v 680 (1105)
T KOG1326|consen 610 PIKCLVRVYVVEAFSLQP------SDGNGDADPYVKLLLGKK---RTLDRAHYIPNTLNPVFGKMFELECLLPFEKDLIV 680 (1105)
T ss_pred cceeeEEEEEEEeeeccc------cCCCCCcCceeeeeeccc---hhhhhhhcCcCCCCcHHHHHHHhhcccchhhccee
Confidence 455567788888888753 355677899999998752 12346677889999999999999988887778999
Q ss_pred EEEecCCCCCCCccEEEEEeCCC
Q 007473 544 EVRKYSMPEKDEFAGQTCLPVFQ 566 (602)
Q Consensus 544 ~V~D~d~~~~dd~lGq~~lpL~~ 566 (602)
.|+|+|..+.++.+|+..+.|..
T Consensus 681 ~vyd~D~~~~d~~iget~iDLEn 703 (1105)
T KOG1326|consen 681 EVYDHDLEAQDEKIGETTIDLEN 703 (1105)
T ss_pred EEEEeecccccchhhceehhhhh
Confidence 99999999989999999988764
No 166
>cd08397 C2_PI3K_class_III C2 domain present in class III phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. These are the only domains identified in the class III PI3Ks present in this cd. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Ty
Probab=96.59 E-value=0.008 Score=57.38 Aligned_cols=84 Identities=18% Similarity=0.252 Sum_probs=59.8
Q ss_pred CCceEEEEEecCCCCc-ccccccCCCCCCCCeeccEEEEEeecCCc---cEEEEEEEecCCCCCCCccEEEEEeCCC---
Q 007473 494 PQFYTRVGIAGVPADK-KMKSTKKKVDNWTPVWDDEFTFPLTIPEM---ALLRVEVRKYSMPEKDEFAGQTCLPVFQ--- 566 (602)
Q Consensus 494 ~DpyV~V~i~G~p~d~-~k~kTkvi~nn~nPvWNEtf~F~v~~pel---a~Lrf~V~D~d~~~~dd~lGq~~lpL~~--- 566 (602)
+|.||++.+......- ....|+.+.-+-.+.|||.++|+|...++ |.|+|+||+.+..+....+|.+.++|-.
T Consensus 30 ~~l~V~~~l~~~~~~L~~pv~T~~~~f~~~~~WnEwl~fpI~i~dLP~~a~L~iti~~~~~~~~~~~vg~~~~~lFd~~g 109 (159)
T cd08397 30 SDLFVTCQVFDDGKPLTLPVQTSYKPFKNRRNWNEWLTLPIKYSDLPRNSQLAITIWDVSGTGKAVPFGGTTLSLFNKDG 109 (159)
T ss_pred CCEEEEEEEEECCEeccCcEEccccCCCCCcccceeEEcccchhcCChhheEEEEEEEecCCCCceEEEEEEEeeECCCC
Confidence 5779999887422111 11244444334468899999999876554 8999999998755556789999999864
Q ss_pred -ccCccEEEEcc
Q 007473 567 -LRPGIHAVPLF 577 (602)
Q Consensus 567 -L~~GyR~ipL~ 577 (602)
|+.|.+.+.|.
T Consensus 110 ~Lr~G~~~l~lw 121 (159)
T cd08397 110 TLRRGRQKLRVW 121 (159)
T ss_pred cEecCCEEEEEE
Confidence 77898888875
No 167
>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins. The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho
Probab=96.59 E-value=0.0093 Score=57.30 Aligned_cols=64 Identities=23% Similarity=0.216 Sum_probs=51.5
Q ss_pred ccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCCCH
Q 007473 134 QFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHLNP 211 (602)
Q Consensus 134 Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~ 211 (602)
+...+-|.++|..|+.+||++||+|+.=-.| +.|||.|- -.+|.||++..++ -+.|.||.-...
T Consensus 9 ~~~pent~~a~~~a~~~g~~~iE~Dv~~tkD-g~~vv~Hd-----i~tL~e~l~~~~~--------~~~i~leiK~~~ 72 (189)
T cd08556 9 GEAPENTLAAFRKALEAGADGVELDVQLTKD-GVLVVIHD-----IPTLEEVLELVKG--------GVGLNIELKEPT 72 (189)
T ss_pred CCCCchHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcC-----CCCHHHHHHhccc--------CcEEEEEECCCC
Confidence 3456899999999999999999999995444 46999998 7789999998776 345677766653
No 168
>cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=96.57 E-value=0.0083 Score=60.41 Aligned_cols=40 Identities=20% Similarity=0.299 Sum_probs=34.8
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
.-+-|.++|.+|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 11 ~pENTl~af~~A~~~G~~~vE~Dv~lTkD-g~~Vv~HD~~l 50 (233)
T cd08582 11 APENTLAAFELAWEQGADGIETDVRLTKD-GELVCVHDPTL 50 (233)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEecCCcc
Confidence 45789999999999999999999996545 46999999887
No 169
>cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG)
Probab=96.54 E-value=0.0068 Score=60.63 Aligned_cols=40 Identities=23% Similarity=0.368 Sum_probs=34.7
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
.-+-|.++|..|+..|+.+||+|++=-.| +.+||.|-.||
T Consensus 11 ~pENT~~af~~A~~~gad~iE~Dv~~TkD-g~lvv~HD~~l 50 (229)
T cd08562 11 APENTLAAFRAAAELGVRWVEFDVKLSGD-GTLVLIHDDTL 50 (229)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEeECCC-CCEEEEcCCCC
Confidence 35788999999999999999999997555 56999998876
No 170
>PLN02964 phosphatidylserine decarboxylase
Probab=96.43 E-value=0.0064 Score=69.70 Aligned_cols=100 Identities=16% Similarity=0.160 Sum_probs=75.9
Q ss_pred cceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEE
Q 007473 465 VKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVE 544 (602)
Q Consensus 465 ~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~ 544 (602)
..+...|++++|. + . -.|+|..+-..| .+.+||.+.+++.||+||+.-.|.|...+..+.+|.
T Consensus 52 ~~~~~~~~~~~~~-~--~----------~~~~~~~~~~~g----~~~f~t~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 114 (644)
T PLN02964 52 FSGIALLTLVGAE-M--K----------FKDKWLACVSFG----EQTFRTETSDSTDKPVWNSEKKLLLEKNGPHLARIS 114 (644)
T ss_pred ccCeEEEEeehhh-h--c----------cCCcEEEEEEec----ceeeeeccccccCCcccchhhceEeccCCcceEEEE
Confidence 3466888999886 1 1 136776655556 367899999999999999999999988788888999
Q ss_pred EEecCCCCCCCccEEEEEeCCCccCc-----cEEEEccCCCC
Q 007473 545 VRKYSMPEKDEFAGQTCLPVFQLRPG-----IHAVPLFDRKG 581 (602)
Q Consensus 545 V~D~d~~~~dd~lGq~~lpL~~L~~G-----yR~ipL~d~~g 581 (602)
|+|.+..+.++++|-+.+++..+-.- ++...++|++|
T Consensus 115 ~~~~~~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~dg 156 (644)
T PLN02964 115 VFETNRLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPSS 156 (644)
T ss_pred EEecCCCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999877655321 22234666654
No 171
>cd08399 C2_PI3K_class_I_gamma C2 domain present in class I gamma phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, gamma isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a cir
Probab=96.29 E-value=0.026 Score=54.83 Aligned_cols=102 Identities=19% Similarity=0.159 Sum_probs=64.1
Q ss_pred eEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc---cEEEEE
Q 007473 468 TLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM---ALLRVE 544 (602)
Q Consensus 468 ~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel---a~Lrf~ 544 (602)
.++|+|.++..... +.......||++.+.....-....+|.....+-+|.|||.++|++...++ |.|.|+
T Consensus 11 ~friki~~~~~~~~-------~~~~~~~l~V~~~Ly~g~~~l~~~~T~~~~~~~~~~WnEwL~f~I~~~dLP~~arLc~t 83 (178)
T cd08399 11 KFRVKILGIDIPVL-------PRNTDLTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNTWLEFDIKIKDLPKGALLNLQ 83 (178)
T ss_pred CEEEEEEeecccCc-------CCCCceEEEEEEEEEECCeecccceeeccCCCCCccccccEECccccccCChhhEEEEE
Confidence 48888888763211 11122345888877642111123345555445579999999999876554 889999
Q ss_pred EEecCCC----------------CCCCccEEEEEeCC----CccCccEEEEc
Q 007473 545 VRKYSMP----------------EKDEFAGQTCLPVF----QLRPGIHAVPL 576 (602)
Q Consensus 545 V~D~d~~----------------~~dd~lGq~~lpL~----~L~~GyR~ipL 576 (602)
||+.... ...-.||++.++|- .|++|...+.+
T Consensus 84 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~wvn~~LFD~~~~Lr~G~~~L~~ 135 (178)
T cd08399 84 IYCGKAPALSSKKSAESPSSESKGKHQLLYYVNLLLIDHRFLLRTGEYVLHM 135 (178)
T ss_pred EEEEecCcccccccccccccccccccceEEEEEEEEEcCCCceecCCEEEEE
Confidence 9985211 12457888888875 47888776655
No 172
>cd08684 C2A_Tac2-N C2 domain first repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphos
Probab=96.28 E-value=0.007 Score=51.64 Aligned_cols=90 Identities=12% Similarity=0.225 Sum_probs=60.2
Q ss_pred EEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCc--cEEEEEEEec
Q 007473 471 VKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEM--ALLRVEVRKY 548 (602)
Q Consensus 471 V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pel--a~Lrf~V~D~ 548 (602)
|+|+.+.++..+. .+ ...+..||+=-+. .+ .....||.+.+...||+|+|+|.|.+....+ ..|.|.|+.
T Consensus 3 itv~~c~d~s~~~---~~--~e~~~i~ikg~~t-l~-kpv~~KsS~rrgs~d~~f~ETFVFqi~l~qL~~V~L~fsv~~- 74 (103)
T cd08684 3 ITVLKCKDLSWPS---SC--GENPTIYIKGILT-LP-KPVHFKSSAKEGSNDIEFMETFVFAIKLQNLQTVRLVFKIQT- 74 (103)
T ss_pred EEEEEeccccccc---cc--CcCCeeEEEEEEe-cC-CCccccchhhcCCCChhHHHHHHHHHHHhhccceEEEEEeec-
Confidence 5677777765431 11 1123334442222 12 2356788888888999999999999876555 357788887
Q ss_pred CCCCCCCccEEEEEeCCCccC
Q 007473 549 SMPEKDEFAGQTCLPVFQLRP 569 (602)
Q Consensus 549 d~~~~dd~lGq~~lpL~~L~~ 569 (602)
...+.+.||++.+.++++.+
T Consensus 75 -~~~RKe~iG~~sL~l~s~ge 94 (103)
T cd08684 75 -QTPRKRTIGECSLSLRTLST 94 (103)
T ss_pred -cCCccceeeEEEeecccCCH
Confidence 34568899999999988754
No 173
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=96.25 E-value=0.011 Score=58.95 Aligned_cols=40 Identities=18% Similarity=0.287 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
.-+.|..+|..|+..||..||+||+=-.| +.|||.|-.||
T Consensus 11 ~pENT~~af~~A~~~Gad~vE~DV~~T~D-g~~vv~HD~~l 50 (220)
T cd08579 11 GVENTLEALEAAIKAKPDYVEIDVQETKD-GQFVVMHDANL 50 (220)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcCCch
Confidence 45788999999999999999999997555 56999999886
No 174
>PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme.; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B ....
Probab=96.17 E-value=0.0068 Score=60.66 Aligned_cols=41 Identities=24% Similarity=0.297 Sum_probs=32.8
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
..+.|.+++..|+..|+++||+|||=-.| +.|||+|..++-
T Consensus 8 ~pENTl~af~~A~~~G~~~iE~Dv~lTkD-g~~Vv~HD~~l~ 48 (256)
T PF03009_consen 8 APENTLAAFRAAIELGADGIELDVQLTKD-GVPVVFHDDTLD 48 (256)
T ss_dssp SSTTSHHHHHHHHHTTSSEEEEEEEE-TT-S-EEE-SSSBST
T ss_pred ChhhHHHHHHHHHHhCCCeEcccccccCC-ceeEeccCCeee
Confidence 34899999999999999999999996555 579999986543
No 175
>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.
Probab=96.04 E-value=0.018 Score=57.93 Aligned_cols=40 Identities=25% Similarity=0.435 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
.-+.|.++|.+|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 13 ~pENT~~Af~~A~~~g~~~vE~DV~~TkD-g~~Vv~HD~~l 52 (230)
T cd08563 13 APENTLLAFKKAIEAGADGIELDVHLTKD-GQLVVIHDETV 52 (230)
T ss_pred CCchhHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCc
Confidence 46889999999999999999999996555 46999998876
No 176
>cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.90 E-value=0.028 Score=57.45 Aligned_cols=40 Identities=30% Similarity=0.370 Sum_probs=35.0
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
=+-|.++|..|+..||..||+||+=-.| +.|||+|..||.
T Consensus 14 pENT~~Af~~A~~~Gad~vE~DV~~TkD-g~~Vv~HD~~l~ 53 (263)
T cd08567 14 PENTLPAFAKALDLGVDTLELDLVLTKD-GVIVVSHDPKLN 53 (263)
T ss_pred CcchHHHHHHHHHcCCCEEEEEEEEcCC-CCEEEeCCCccC
Confidence 4778999999999999999999996555 579999999873
No 177
>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=95.79 E-value=0.034 Score=56.21 Aligned_cols=98 Identities=21% Similarity=0.305 Sum_probs=67.9
Q ss_pred cCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc------cchHHHHHHHHhhc--cc-
Q 007473 124 TGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT------PVELIKCLRAIKEN--AF- 194 (602)
Q Consensus 124 SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts------~i~f~dvi~aI~~~--AF- 194 (602)
-|||-|.- --....||..||-.||+|||=- + ++.+|.|-..+.+ ++.+..+.+.++.. +|
T Consensus 4 hsHNDY~r---------~~Pl~~Al~~g~~svEaDV~l~-d-g~l~V~Hd~~~l~~~~tl~~Lyl~pL~~~l~~~n~~~~ 72 (228)
T cd08577 4 HSHNDYWR---------KRPLYDALSAGFGSIEADVWLV-N-GDLLVAHDEVDLSPARTLESLYLDPLLEILDQNNGQAY 72 (228)
T ss_pred cccccccc---------ccchHHHHHcCCCEEEEeEEEE-C-CEEEEEcChhHcCccCCHHHHhHHHHHHHHHHcCCCCC
Confidence 59999984 2246679999999999999953 2 4578888766543 35566677666544 23
Q ss_pred ccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCC
Q 007473 195 SASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSP 232 (602)
Q Consensus 195 ~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~ 232 (602)
....-|++|-||..-+...--.++.-.-+-+.+..+..
T Consensus 73 ~~~~~~l~LlIDiKt~g~~t~~~l~~~L~~~~~~~~~~ 110 (228)
T cd08577 73 NDPEQPLQLLIDIKTDGESTYPALEEVLKPYIDIGYLS 110 (228)
T ss_pred CCCCCceEEEEEECCCChHHHHHHHHHHHHHHhcCcee
Confidence 34567999999999987654444445555566666553
No 178
>cd08619 PI-PLCXDc_plant Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing proteins found in plants. The CD corresponds to the catalytic domain present in uncharacterized plant phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, plant PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although the biological function of plant PI-PLCXDs still remains u
Probab=95.72 E-value=0.046 Score=56.66 Aligned_cols=137 Identities=20% Similarity=0.210 Sum_probs=89.2
Q ss_pred cCCCCcccccccccCCccccc---CCccC---CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHH
Q 007473 111 QDMTAPLSHYFIYTGHNSYLI---GNQFS---SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIK 184 (602)
Q Consensus 111 qdM~~PLs~YfI~SSHNTYL~---g~Ql~---g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~d 184 (602)
-+-+.||++=.|--||||.-. +..+. +..--.....=|..|+|-+.|-|=. ...++||.. ...+|.+
T Consensus 23 ~~~~l~L~~L~IPGTHDS~t~~~~~~~~~~~~s~tQ~~sI~~QL~~GiRyfDiRv~~-----~~~~~HG~~--~~~~~~d 95 (285)
T cd08619 23 MDSSLKLRDIVWPGTHDSATNKIGIPKVSRPFARCQSLSIYNQLCSGARVLDIRVQE-----DRRVCHGCL--KTYPVDV 95 (285)
T ss_pred CCCCcEeeheeeCCCccccccCCCCCccccccccccCCcHHHHHhCCceEEEEEecC-----CeEEECCCc--CCCcHHH
Confidence 356789999999999998743 22211 1122223566789999999999854 257999963 2468999
Q ss_pred HHHHHhhcccccCCCceEEEecCCCCHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCChhhcccc-EEEecCC
Q 007473 185 CLRAIKENAFSASPYPVILTFEDHLNPHLQAKVAQMITQTFGAMLYSPESECLKEFPSPEELKYR-IIISTKP 256 (602)
Q Consensus 185 vi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk~K-Ilik~K~ 256 (602)
|++.|+++-=....=-|||++......+......+.+.+.||+.|+.+. ...... +.++|.+| |||-.+.
T Consensus 96 vL~~i~~FL~~hp~EvVIL~~k~ey~~~~~~~~~~~li~~lGd~l~~~~-~~~~~~-TL~eL~~krVIviy~~ 166 (285)
T cd08619 96 VLNDIKRFLSETKSEFVILEIRTEYGHEDPPQFDLWLVEQLGDHLIHQD-DSVFSK-TLAELLPKRVICIWKP 166 (285)
T ss_pred HHHHHHHHHHHCCCeEEEEEEeecccCCCchHHHHHHHHHhcchhccCC-Cccccc-cHHHHhCCcEEEEEcC
Confidence 9999998642333344999996554332222355788999999998753 222222 67777654 4544543
No 179
>PF00792 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: IPR002420 Phosphatidylinositol 3-kinase (PI3-kinase) (2.7.1.137 from EC) is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The usually N-terminal C2 domain interacts mainly with the scaffolding helical domain of the enzyme, and exhibits only minor interactions with the catalytic domain []. The domain consists of two four-stranded antiparallel beta-sheets that form a beta-sandwich. Isolated C2 domain binds multilamellar phospholipid vesicles which suggests that this domain could play a role in membrane association. Membrane attachment by C2 domains is typically mediated by the loops connecting beta-strand regions that in other C2 domain-containing proteins are calcium-binding region; GO: 0016303 1-phosphatidylinositol-3-kinase activity, 0046854 phosphatidylinositol phosphorylation, 0048015 phosphatidylinositol-mediated signaling, 0005942 phosphatidylinositol 3-kinase complex; PDB: 1E8W_A 1E8X_A 1E7V_A 1E90_A 1E7U_A 3L54_A 1E8Z_A 2CHX_A 3ML8_A 3OAW_A ....
Probab=95.61 E-value=0.035 Score=51.78 Aligned_cols=82 Identities=27% Similarity=0.372 Sum_probs=53.9
Q ss_pred ceEEEEEecCCCCcc--cccccCCCCC-CCCeeccEEEEEeec---CCccEEEEEEEecCCCCCC----CccEEEEEeCC
Q 007473 496 FYTRVGIAGVPADKK--MKSTKKKVDN-WTPVWDDEFTFPLTI---PEMALLRVEVRKYSMPEKD----EFAGQTCLPVF 565 (602)
Q Consensus 496 pyV~V~i~G~p~d~~--k~kTkvi~nn-~nPvWNEtf~F~v~~---pela~Lrf~V~D~d~~~~d----d~lGq~~lpL~ 565 (602)
.||++.+.-....-. ...|+.+.-+ .++.|||.++|++.. |-.|.|.|+|+..+..... ..||++.+||-
T Consensus 4 ~~V~~~ly~g~~~L~~p~~~T~~~~~~~~~~~W~e~l~F~i~i~~LPr~a~L~~~l~~~~~~~~~~~~~~~lgw~n~~lF 83 (142)
T PF00792_consen 4 LYVECQLYHGGEPLCNPVQSTSYVPFSFSRPKWDEWLTFPIPISDLPREARLCFTLYGVDSKKKSKKKKVPLGWVNLPLF 83 (142)
T ss_dssp EEEEEEEEETTEESS-EEEE-S-EESS-SSEEEEEEEEEEEEGGGS-TTEEEEEEEEEEECSTTT--EEEEEEEEEEESB
T ss_pred EEEEEEEEECCEEeecCeeeccccccccccceEeeEEEeecChHHCChhHeEEEEEEEecCCCccccceeEEEEEEEEeE
Confidence 366666652111111 2245555444 689999999999864 5558999999997755444 68999999976
Q ss_pred C----ccCccEEEEcc
Q 007473 566 Q----LRPGIHAVPLF 577 (602)
Q Consensus 566 ~----L~~GyR~ipL~ 577 (602)
. |++|...+.|.
T Consensus 84 d~~~~L~~G~~~L~lW 99 (142)
T PF00792_consen 84 DYRGQLRQGPQKLSLW 99 (142)
T ss_dssp -TTSBBEEEEEEEE-E
T ss_pred CCCCcccCCCEEEEEE
Confidence 4 67888888775
No 180
>cd08620 PI-PLCXDc_like_1 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=95.60 E-value=0.099 Score=54.49 Aligned_cols=140 Identities=14% Similarity=0.167 Sum_probs=88.1
Q ss_pred CCcccccccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEe---ecC----CCCCCceEeecccccccchHHHHH
Q 007473 114 TAPLSHYFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDL---WPN----SAKDDVLVLHGRTLTTPVELIKCL 186 (602)
Q Consensus 114 ~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~---WdG----~~~~~piv~HG~Tlts~i~f~dvi 186 (602)
++||++..|-.|||+.-.+---.+..--.....=|..|.|-+.|=| ++. ....+-..+|| +-...+|.+++
T Consensus 6 ~~~l~~l~iPGtHDSg~~~~~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~~~~~~~~~~~~~Hg--~~~~~~l~~~L 83 (281)
T cd08620 6 QQPFNRFVLPGAHDAGMNGMTNLSVTQKDNVSTQLALGARYFDFRPGYLWPQTRVLVLLNDLYHQHN--MIPGQGFDTFL 83 (281)
T ss_pred CcchhheeecCCCcccccCCCchhhcCCccHHHHHhcCcEEEEEEeeeccCccccccccCcEEEEee--ccCCCcHHHHH
Confidence 5799999999999987554221122222335667899999988866 221 01123234454 44567999999
Q ss_pred HHHhhcccccCCCceEEEecC-----CCCHHHHHHHHHHHHHHhhcccCCCC--CCCCCCCCChhhccc---cEEEecC
Q 007473 187 RAIKENAFSASPYPVILTFED-----HLNPHLQAKVAQMITQTFGAMLYSPE--SECLKEFPSPEELKY---RIIISTK 255 (602)
Q Consensus 187 ~aI~~~AF~~S~yPvILSlE~-----Hcs~~qQ~~ma~~l~~~~Gd~L~~~~--~~~~~~lPSP~~Lk~---KIlik~K 255 (602)
+.|+.+.=....=-|||+|-+ ||-.+.+..+.+.+.++|++.-+.+. ......-|+.++|.+ ++||-.+
T Consensus 84 ~~i~~FL~~~p~EvVil~~~~~~~~~d~~~p~~~~l~~~l~~~f~~~~~~~~~~~~~~~~~~TL~~L~~~gkrvIv~y~ 162 (281)
T cd08620 84 QDVVTFLKANPTEIVVVHITWDGFDNDCARPSAQEVVEALAQALASAKVGYVTSGTVSDLAASYAQLRQTGKRLIVLFG 162 (281)
T ss_pred HHHHHHHHHCCCcEEEEEEEcCCccccccChhHHHHHHHHHHHhhccCccccCCCccccccCcHHHHHhCCCEEEEEEc
Confidence 999986544455669999942 44334446778889999998544432 111233578999944 4555443
No 181
>cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.54 E-value=0.068 Score=54.16 Aligned_cols=39 Identities=31% Similarity=0.461 Sum_probs=33.8
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
-+-|..++.+|+..||..||+|+|=-.| +.|||.|-.|+
T Consensus 12 pENTl~af~~A~~~G~d~iE~DV~~TkD-g~~Vv~HD~~l 50 (235)
T cd08565 12 PENTLEGFRKALELGVDAVEFDVHLTAD-GEVVVIHDPTL 50 (235)
T ss_pred CccHHHHHHHHHHcCCCEEEEeEEEccC-CCEEEECCChh
Confidence 4778999999999999999999995444 46999998876
No 182
>cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function.
Probab=95.35 E-value=0.058 Score=54.78 Aligned_cols=38 Identities=24% Similarity=0.418 Sum_probs=33.6
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 138 DCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 138 ~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
+-|..+|..|+..||+.||+|+.=-.| +.|||.|-.|+
T Consensus 15 ENTl~af~~A~~~g~d~iE~DV~~T~D-g~~vv~HD~~l 52 (240)
T cd08566 15 ENSLAAIEAAIDLGADIVEIDVRRTKD-GVLVLMHDDTL 52 (240)
T ss_pred ccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCC
Confidence 778999999999999999999997555 46999998776
No 183
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=95.20 E-value=0.088 Score=45.14 Aligned_cols=63 Identities=10% Similarity=0.292 Sum_probs=49.9
Q ss_pred hHHHHHHHhhCC---CCccCHHHHHHHHHHH--hCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAEG---GTHMTAEQLWQFLVEV--QGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~~---~~~l~~~~~~~Fl~~~--Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.|-.+|.+|++. ..+|+.++|+..|.++ .++. .+.+++.+++...... +.+.++++.|..+|.
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k-~t~~ev~~m~~~~D~d-------~dG~Idf~EFv~lm~ 78 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSK-LQDAEIAKLMEDLDRN-------KDQEVNFQEYVTFLG 78 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHhcCC-------CCCCCcHHHHHHHHH
Confidence 477899999973 3599999999999752 4664 6889999999876422 346899999998885
No 184
>cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G
Probab=95.13 E-value=0.082 Score=54.35 Aligned_cols=40 Identities=20% Similarity=0.260 Sum_probs=34.1
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
.-+-|..+|.+|+..||..||+|+|=-.| +.|||.|-.++
T Consensus 11 ~pENTl~af~~A~~~Gad~iE~DV~lTkD-g~~Vv~HD~~l 50 (258)
T cd08573 11 APENTLAAFRQAKKNGADGVEFDLEFTKD-GVPVLMHDDTV 50 (258)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECCC-CcEEEECCCCc
Confidence 45788999999999999999999996555 46999998765
No 185
>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.
Probab=95.05 E-value=0.09 Score=52.72 Aligned_cols=79 Identities=22% Similarity=0.350 Sum_probs=54.9
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc------------------------cc-hHHHHHHHH
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT------------------------PV-ELIKCLRAI 189 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts------------------------~i-~f~dvi~aI 189 (602)
..-+-|.+++..|+..||+.||+|++=-.| +.|||+|=.|+.. +| +|.||++.+
T Consensus 11 ~~pENTl~af~~A~~~Gad~iE~DV~lT~D-g~~Vv~HD~~l~R~t~~~g~v~~~t~~eL~~l~~~g~~iPtL~evl~~~ 89 (226)
T cd08568 11 KYPENTLEAFKKAIEYGADGVELDVWLTKD-GKLVVLHDENLKRVGGVDLKVKELTYKELKKLHPGGELIPTLEEVFRAL 89 (226)
T ss_pred CCCcchHHHHHHHHHcCcCEEEEEEEEcCC-CCEEEECCCcccccCCCCceeecCCHHHHhhCCCCCCcCCCHHHHHHhc
Confidence 345889999999999999999999995544 4699999877631 24 589999876
Q ss_pred hhcccccCCCceEEEecCCCCHHHHHHHHHHHHH
Q 007473 190 KENAFSASPYPVILTFEDHLNPHLQAKVAQMITQ 223 (602)
Q Consensus 190 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~ 223 (602)
+.. +.|-||.-.. .....+++.+++
T Consensus 90 ~~~--------~~l~iEiK~~-~~~~~~~~~l~~ 114 (226)
T cd08568 90 PND--------AIINVEIKDI-DAVEPVLEIVEK 114 (226)
T ss_pred CCC--------cEEEEEECCc-cHHHHHHHHHHH
Confidence 441 2466666542 223445555543
No 186
>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=94.61 E-value=0.16 Score=52.28 Aligned_cols=39 Identities=26% Similarity=0.487 Sum_probs=33.2
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRT 175 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~T 175 (602)
.-+-|..+|..|+..|+..||+|||=-.| +.|||+|..|
T Consensus 18 ~pENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~ 56 (265)
T cd08564 18 YPENTLPSFRRALEIGVDGVELDVFLTKD-NEIVVFHGTE 56 (265)
T ss_pred CCchhHHHHHHHHHcCCCEEEEeeEECCC-CCEEEEcCCc
Confidence 45789999999999999999999995444 4699999863
No 187
>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=94.37 E-value=0.17 Score=49.69 Aligned_cols=47 Identities=11% Similarity=0.167 Sum_probs=42.0
Q ss_pred ChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHHh
Q 007473 140 SDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIK 190 (602)
Q Consensus 140 s~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~ 190 (602)
+..++.+|+.. .-||+|++.- | +.+||.|-.|+..-.+|+||++++.
T Consensus 8 Tl~AF~~A~~~--dgvE~DVr~t-D-g~lVV~HD~~l~~~PtLeEvL~~~~ 54 (192)
T cd08584 8 TITALKRTFEN--FGVETDIRDY-G-GQLVISHDPFVKNGELLEDWLKEYN 54 (192)
T ss_pred HHHHHHHHHHC--CEEEEEEEee-C-CeEEEECCCCCCCCCCHHHHHHhcc
Confidence 58899999998 9999999986 5 5799999999988888999998874
No 188
>cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4.
Probab=94.23 E-value=0.049 Score=56.16 Aligned_cols=41 Identities=24% Similarity=0.396 Sum_probs=35.6
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT 178 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 178 (602)
-+-|.+++..|+..||++||+|++=-.| +.|||.|-.|+..
T Consensus 14 pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~r 54 (264)
T cd08575 14 PENTIAAFRHAVKNGADMLELDVQLTKD-GQVVVFHDWDLDR 54 (264)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEEcCCcccc
Confidence 4778999999999999999999997655 5799999998643
No 189
>KOG3837 consensus Uncharacterized conserved protein, contains DM14 and C2 domains [General function prediction only]
Probab=94.01 E-value=0.054 Score=58.02 Aligned_cols=123 Identities=15% Similarity=0.166 Sum_probs=88.9
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeec-CCc-------
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTI-PEM------- 538 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~-pel------- 538 (602)
..|.+.|.+++.++.+....+ .|.||+++..-......+.+|.+|+++-+|.|+|.|...+.. +.+
T Consensus 367 ~elel~ivrg~~~pvp~gp~h------ld~fvr~efpl~nD~~qk~kt~vik~t~SPdfde~fklni~rg~~~nr~fqR~ 440 (523)
T KOG3837|consen 367 QELELAIVRGQKNPVPGGPMH------LDQFVRLEFPLENDSRQKLKTDVIKVTPSPDFDEDFKLNIRRGPGLNREFQRR 440 (523)
T ss_pred hHhHHHHhhcccCCCCCCchh------HHhhhcccccccccccccCccceeeCCCCCCcccceeeeccCCCcccHHHHHH
Confidence 347778888888775421111 467999887643323356789999999999999999988753 211
Q ss_pred ---cEEEEEEEecCCC-CCCCccEEEEEeCCCccCc---cEEEEccCCCCCccCCeEEEEEEEEEE
Q 007473 539 ---ALLRVEVRKYSMP-EKDEFAGQTCLPVFQLRPG---IHAVPLFDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 539 ---a~Lrf~V~D~d~~-~~dd~lGq~~lpL~~L~~G---yR~ipL~d~~g~~l~~asL~v~i~~~e 597 (602)
--++|.|+....+ .+|.++|.+-+-+.-|..- ...++|+| |+...++.|-|+|.+.+
T Consensus 441 fkr~g~kfeifhkggf~rSdkl~gt~nikle~Len~cei~e~~~l~D--GRK~vGGkLevKvRiR~ 504 (523)
T KOG3837|consen 441 FKRLGKKFEIFHKGGFNRSDKLTGTGNIKLEILENMCEICEYLPLKD--GRKAVGGKLEVKVRIRQ 504 (523)
T ss_pred HHhcCeeEEEeeccccccccceeceeeeeehhhhcccchhhceeccc--cccccCCeeEEEEEEec
Confidence 2488999997654 4588999999988877654 34688875 56667889999998865
No 190
>cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=93.99 E-value=0.056 Score=55.00 Aligned_cols=41 Identities=22% Similarity=0.390 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
.-+-|.++|.+|+..||++||+|++=-.| +.|||+|-.||.
T Consensus 11 ~pENT~~af~~A~~~g~d~vE~Dv~~TkD-g~~Vv~HD~~l~ 51 (249)
T cd08561 11 APENTLLAFEDAVELGADVLETDVHATKD-GVLVVIHDETLD 51 (249)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 45789999999999999999999995444 479999998874
No 191
>cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo
Probab=93.47 E-value=0.079 Score=54.26 Aligned_cols=40 Identities=28% Similarity=0.346 Sum_probs=35.0
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 15 PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVV~HD~~l~ 54 (252)
T cd08574 15 PENTLMSFEKALEHGVYGLETDVTISYD-GVPFLMHDRTLR 54 (252)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEeEccC-CcEEEeCCCccc
Confidence 4778999999999999999999996555 469999998874
No 192
>cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=92.94 E-value=0.11 Score=53.01 Aligned_cols=41 Identities=24% Similarity=0.284 Sum_probs=35.6
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
.-+-|..++..|+..||..||+|||=-.| +.|||.|-.||.
T Consensus 13 ~pENT~~af~~A~~~G~d~vE~DV~lTkD-g~~Vv~HD~~l~ 53 (256)
T cd08601 13 APEHTFAAYDLAREMGADYIELDLQMTKD-GVLVAMHDETLD 53 (256)
T ss_pred CCCchHHHHHHHHHcCCCEEEEEeeECCC-CeEEEeCCCccc
Confidence 35889999999999999999999997555 569999998873
No 193
>cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.
Probab=92.80 E-value=0.14 Score=52.87 Aligned_cols=42 Identities=19% Similarity=0.177 Sum_probs=35.5
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
+.-+-|..+|..|+..||..||+||+=-.| +.|||.|-.|+.
T Consensus 12 ~~PENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~l~ 53 (263)
T cd08580 12 DAPENTLLAISKALANGADAIWLTVQLSKD-GVPVLYRPSDLK 53 (263)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeEECCC-CCEEEeCCCchh
Confidence 445778999999999999999999995544 469999998874
No 194
>cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism.
Probab=92.80 E-value=0.13 Score=53.58 Aligned_cols=49 Identities=18% Similarity=0.228 Sum_probs=39.7
Q ss_pred cccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007473 129 YLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT 178 (602)
Q Consensus 129 YL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 178 (602)
|+.+.-..=+.+..+|..|+..|+..||+||+=-.| +.|||+|=.|+..
T Consensus 12 ~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTkD-g~~VV~HD~~l~r 60 (290)
T cd08607 12 YTAASAVVRENTIASFLQAAEHGADMVEFDVQLTKD-LVPVVYHDFTLRV 60 (290)
T ss_pred cccccCCCCccHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCeeEe
Confidence 454444556889999999999999999999996545 4799999988753
No 195
>cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=92.69 E-value=0.12 Score=52.06 Aligned_cols=40 Identities=25% Similarity=0.352 Sum_probs=35.1
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
-+-|..+|.+|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 12 PENTl~Af~~A~~~gad~iE~DV~lTkD-g~~Vv~HD~~l~ 51 (229)
T cd08581 12 PENTLVGFRAAVDAGARFVEFDVQLSAD-GVPVVFHDDTLL 51 (229)
T ss_pred CccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEECCCccc
Confidence 4778999999999999999999997555 579999999874
No 196
>cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family.
Probab=92.63 E-value=0.13 Score=53.96 Aligned_cols=40 Identities=25% Similarity=0.350 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
-+-|.+++..|+..||+.||+|+|=-.| +.|||+|-.|+.
T Consensus 40 PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVV~HD~~l~ 79 (300)
T cd08612 40 LENTMEAFEHAVKVGTDMLELDVHLTKD-GQVVVSHDENLL 79 (300)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeECcC-CeEEEECCcccc
Confidence 4778999999999999999999996545 579999998873
No 197
>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional
Probab=92.51 E-value=0.16 Score=54.75 Aligned_cols=42 Identities=24% Similarity=0.326 Sum_probs=36.0
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
+.=+.|.++|..|+..|+.-||+|+|=-.| +.|||+|..+|.
T Consensus 38 ~~PENTl~Af~~A~~~GaD~IE~DV~lTkD-g~lVv~HD~~l~ 79 (355)
T PRK11143 38 YLPEHTLPAKAMAYAQGADYLEQDLVMTKD-DQLVVLHDHYLD 79 (355)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEccC-CcEEEeCCchhc
Confidence 345889999999999999999999996555 469999998764
No 198
>KOG2060 consensus Rab3 effector RIM1 and related proteins, contain PDZ and C2 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.37 E-value=0.11 Score=55.14 Aligned_cols=107 Identities=22% Similarity=0.245 Sum_probs=78.2
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
.+.+.|+||.|.+|... ....+.++|||+|++.+...-..+++|+...++..|.+-..+.|.=..| -..|.+.|
T Consensus 268 ~g~l~vEii~ar~l~~k-----~~~k~~~apyVkVYlL~~g~c~ak~ktk~A~kT~~plyqq~l~f~~sp~-~k~Lq~tv 341 (405)
T KOG2060|consen 268 KGDLEVEIIRARGLVVK-----PGSKSLPAPYVKVYLLENGFCIAKKKTKSARKTLDPLYQQQLSFDQSPP-GKYLQGTV 341 (405)
T ss_pred cCceeEEEEeccccccc-----CCcccccCceeEEEEcCCCceecccccccccccCchhhhhhhhhccCCC-ccEEEEEE
Confidence 35699999999999642 1223468999999999766656688999999999999988888875433 45788888
Q ss_pred Ee-cCCCCCCCccEEEEEeCCCcc----CccEEEEccC
Q 007473 546 RK-YSMPEKDEFAGQTCLPVFQLR----PGIHAVPLFD 578 (602)
Q Consensus 546 ~D-~d~~~~dd~lGq~~lpL~~L~----~GyR~ipL~d 578 (602)
|. +.....+.|+|.+.+-+..|. ++.-|.+|+.
T Consensus 342 ~gdygRmd~k~fmg~aqi~l~eL~ls~~~~igwyKlfg 379 (405)
T KOG2060|consen 342 WGDYGRMDHKSFMGVAQIMLDELNLSSSPVIGWYKLFG 379 (405)
T ss_pred eccccccchHHHhhHHHHHhhhhccccccceeeeeccC
Confidence 86 344455778998888777764 4455666653
No 199
>cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs.
Probab=92.34 E-value=0.14 Score=53.20 Aligned_cols=38 Identities=16% Similarity=0.200 Sum_probs=34.0
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007473 138 DCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTL 176 (602)
Q Consensus 138 ~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 176 (602)
|-+..++.+|+..||..||+|||=-.| +.|||+|=.|+
T Consensus 25 ENTl~Af~~A~~~Gad~vE~DV~lTkD-g~~VV~HD~~l 62 (282)
T cd08605 25 ENTIASFIAASKFGADFVEFDVQVTRD-GVPVIWHDDFI 62 (282)
T ss_pred CcHHHHHHHHHHcCCCEEEEEEEECcC-CeEEEECCCce
Confidence 678999999999999999999996555 57999999988
No 200
>cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP
Probab=92.31 E-value=0.15 Score=54.06 Aligned_cols=42 Identities=19% Similarity=0.290 Sum_probs=36.0
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
+.-+.|.++|..|+..||..||+||+=-.| +.|||.|..+|.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (318)
T cd08600 12 YLPEHTLEAKALAYAQGADYLEQDVVLTKD-DKLVVIHDHYLD 53 (318)
T ss_pred CCCccHHHHHHHHHHcCCCEEEeeeeECcC-CcEEEeCCchhh
Confidence 455889999999999999999999996555 469999999873
No 201
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=92.15 E-value=0.55 Score=40.31 Aligned_cols=64 Identities=13% Similarity=0.263 Sum_probs=46.4
Q ss_pred hHHHHHHHhhCC-C--CccCHHHHHHHHHHHhC---CCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAEG-G--THMTAEQLWQFLVEVQG---HGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~~-~--~~l~~~~~~~Fl~~~Q~---~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
-|..+|.+|++. + ..|+.++|+.||..+-. ....+...+.+++..+-.. +.+.+++++|..+|.
T Consensus 10 ~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d-------~DG~I~f~EF~~l~~ 79 (89)
T cd05023 10 SLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLN-------SDGQLDFQEFLNLIG 79 (89)
T ss_pred HHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCC-------CCCcCcHHHHHHHHH
Confidence 467899999853 2 38999999999998631 1123567788888865421 346899999998875
No 202
>KOG1327 consensus Copine [Signal transduction mechanisms]
Probab=92.03 E-value=0.31 Score=54.46 Aligned_cols=86 Identities=21% Similarity=0.279 Sum_probs=68.5
Q ss_pred ccccCCCCCCCCeeccEEEEEeecCCccEEEEEEEecCCC----CCCCccEEEEEeCCCcc-CccEEEEccCCCCCccCC
Q 007473 512 KSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEVRKYSMP----EKDEFAGQTCLPVFQLR-PGIHAVPLFDRKGEELGS 586 (602)
Q Consensus 512 ~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~----~~dd~lGq~~lpL~~L~-~GyR~ipL~d~~g~~l~~ 586 (602)
.+|.++.+..||.|-++|.....+.+.-.|+|.|+|-+.. ...+|+|++..-++.+. ...+.++|.-..++.-..
T Consensus 43 ~rte~i~~~~~p~f~~~~~l~y~fE~vQ~l~~~~~~~~~~~~~l~~~dflg~~~c~l~~ivs~~~~~~~l~~~~~~~~~~ 122 (529)
T KOG1327|consen 43 GRTEVIRNVLNPFFTKKFLLQYRFEKVQLLRFEVYDIDSRTPDLSSADFLGTAECTLSQIVSSSGLTGPLLLKPGKNAGS 122 (529)
T ss_pred cceeeeeccCCccceeeechhheeeeeeeEEEEEeecCCccCCcchhcccceeeeehhhhhhhhhhhhhhhcccCccCCc
Confidence 4788999999999999998888888888999999997754 34789999988888764 456677776666666667
Q ss_pred eEEEEEEEEEE
Q 007473 587 ARLLMRFEFYE 597 (602)
Q Consensus 587 asL~v~i~~~e 597 (602)
+++.++++-.+
T Consensus 123 g~iti~aee~~ 133 (529)
T KOG1327|consen 123 GTITISAEEDE 133 (529)
T ss_pred ccEEEEeeccc
Confidence 88888776544
No 203
>cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI),
Probab=91.83 E-value=0.16 Score=53.20 Aligned_cols=41 Identities=22% Similarity=0.238 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
.=+.|..+|..|+..||..||+||+=-.| +.|||+|-.+|-
T Consensus 13 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (296)
T cd08559 13 APEHTLAAYALAIEMGADYIEQDLVMTKD-GVLVARHDPTLD 53 (296)
T ss_pred CccchHHHHHHHHHhCCCEEEEeeEEccC-CCEEEeccchhh
Confidence 34789999999999999999999996555 469999998774
No 204
>cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv
Probab=91.80 E-value=0.17 Score=53.37 Aligned_cols=41 Identities=22% Similarity=0.332 Sum_probs=35.3
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT 178 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 178 (602)
-+.+..+|..|+..|+..||+|++=-.| +.+||.|-.+|..
T Consensus 14 PENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVv~HD~~l~r 54 (302)
T cd08571 14 PDSTDLAYQKAISDGADVLDCDVQLTKD-GVPICLPSINLDN 54 (302)
T ss_pred CcchHHHHHHHHHcCCCEEEeeeeEcCC-CcEEEeCCchhcC
Confidence 4778999999999999999999996555 4699999998743
No 205
>cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia
Probab=91.80 E-value=0.18 Score=53.48 Aligned_cols=49 Identities=22% Similarity=0.356 Sum_probs=39.2
Q ss_pred CCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 125 GHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 125 SHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
.|.-| .-..-+.|..+|..|+..||..||+||+=-.| +.|||.|-.|+.
T Consensus 31 AHRGa---s~~aPENTl~AF~~Ai~~GaD~IE~DV~lTkD-G~lVV~HD~tL~ 79 (315)
T cd08609 31 GHRGA---PMLAPENTLMSLRKSLECGVVVFETDVMVSKD-GVPFLMHDEGLL 79 (315)
T ss_pred ECCCC---CCCCCccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEeCCCccc
Confidence 55553 22345889999999999999999999997655 579999998864
No 206
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=91.65 E-value=0.84 Score=39.48 Aligned_cols=64 Identities=9% Similarity=0.166 Sum_probs=46.1
Q ss_pred hHHHHHHHhhCCCCccCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAEGGTHMTAEQLWQFLVEVQGH---GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
-|..+|.+||++...|+..+|+..|+.+=.. ...+++.+..|+...-. -+.+.++|.+|..++.
T Consensus 9 ~lI~~FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~-------n~Dg~vdF~EF~~Lv~ 75 (91)
T cd05024 9 KMMLTFHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDD-------CRDGKVGFQSFFSLIA 75 (91)
T ss_pred HHHHHHHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCC-------CCCCcCcHHHHHHHHH
Confidence 4678999999888999999999999765321 01235566777766532 1346799999998875
No 207
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=91.53 E-value=0.86 Score=39.29 Aligned_cols=65 Identities=11% Similarity=0.217 Sum_probs=47.8
Q ss_pred hhHHHHHHHhhC-CC-C-ccCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAE-GG-T-HMTAEQLWQFLVEVQGH---GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~-~~-~-~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.++..+|+.|+. ++ . .||.++|+..|..+.++ ...+.+.+.+|+..+-.. +.+.+++++|..+|.
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n-------~dG~Idf~EF~~l~~ 80 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSN-------KDNEVDFNEFVVLVA 80 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCC-------CCCCCCHHHHHHHHH
Confidence 357788999994 33 3 59999999999876432 123567889999886421 346899999998875
No 208
>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp
Probab=91.49 E-value=0.18 Score=52.40 Aligned_cols=39 Identities=13% Similarity=0.106 Sum_probs=34.8
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 138 DCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 138 ~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
|-+..++..|+..||..||+||+=-.| +.|||+|-.|+.
T Consensus 24 ENTl~af~~A~~~g~d~vE~DV~lTkD-g~~VV~HD~~l~ 62 (286)
T cd08606 24 ENTVESFILAASLGASYVEVDVQLTKD-LVPVIYHDFLVS 62 (286)
T ss_pred cchHHHHHHHHHcCCCEEEEEEEEccC-CEEEEeCCCeec
Confidence 889999999999999999999996555 579999999875
No 209
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=91.47 E-value=0.57 Score=39.99 Aligned_cols=64 Identities=11% Similarity=0.222 Sum_probs=48.1
Q ss_pred hHHHHHHHhhCC---CCccCHHHHHHHHHHHhCCCCCC----HHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 27 DVKEMFKKYAEG---GTHMTAEQLWQFLVEVQGHGGVS----IEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 27 el~~if~~~~~~---~~~l~~~~~~~Fl~~~Q~~~~~~----~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.|..+|.+|+.. ...|+.++|+.+|...-++ ..+ .+++..++..+-.. +.+.++++.|..++.+
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~-~~t~~~~~~~v~~i~~~~D~d-------~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPN-FLKKEKNQKAIDKIFEDLDTN-------QDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhH-hhccCCCHHHHHHHHHHcCCC-------CCCcCcHHHHHHHHHH
Confidence 477899999965 4699999999999754433 244 67888888876421 3468999999988763
No 210
>PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional
Probab=91.26 E-value=0.19 Score=51.26 Aligned_cols=41 Identities=24% Similarity=0.396 Sum_probs=35.5
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
.-|-|.+++..|+..|+..||+||.=-.| +.|||+|=.|+.
T Consensus 20 ~pENT~~Af~~A~~~G~d~vE~DV~lT~D-g~lVV~HD~~l~ 60 (249)
T PRK09454 20 APENTLAAIDVGARYGHRMIEFDAKLSAD-GEIFLLHDDTLE 60 (249)
T ss_pred CChHHHHHHHHHHHcCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 34778999999999999999999996555 569999998875
No 211
>cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip
Probab=90.96 E-value=0.3 Score=49.17 Aligned_cols=41 Identities=22% Similarity=0.307 Sum_probs=35.2
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
.-+.|.+||.+|+..|++.||+|++=-.| +.|||.|-.++.
T Consensus 11 ~pENT~~af~~a~~~g~d~vE~Dv~lTkD-g~~vv~HD~~l~ 51 (234)
T cd08570 11 YPENTLLAFEKAVEAGADAIETDVHLTKD-GVVVISHDPNLK 51 (234)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeEccC-CcEEEeCCCccc
Confidence 45889999999999999999999995444 469999998874
No 212
>cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.
Probab=90.69 E-value=0.26 Score=52.17 Aligned_cols=43 Identities=19% Similarity=0.285 Sum_probs=36.6
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT 178 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 178 (602)
+.-+.+..+|..|+..||..||+||+=-.| +.|||.|-.+|..
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DVqlTkD-g~lVv~HD~~l~r 54 (309)
T cd08602 12 YRPEHTLAAYQLAIEQGADFIEPDLVSTKD-GVLICRHEPELSG 54 (309)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEeCCCcccc
Confidence 445889999999999999999999996555 5799999988743
No 213
>cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=90.31 E-value=0.37 Score=48.69 Aligned_cols=40 Identities=25% Similarity=0.224 Sum_probs=34.5
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
-+-|..++..|+..|++-||+|++=-.| +.+||+|-.|++
T Consensus 14 pENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~~~ 53 (237)
T cd08583 14 YTNSLDAFEHNYKKGYRVFEVDLSLTSD-GVLVARHSWDES 53 (237)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeeEccC-CCEEEEECCcCc
Confidence 3788999999999999999999996555 579999998763
No 214
>PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen []. Proteins in this entry are usually annotated as Fam102A, Fam102B, or Eeig1 (early oestrogen-responsive gene product 1).
Probab=90.29 E-value=7.4 Score=35.72 Aligned_cols=118 Identities=15% Similarity=0.123 Sum_probs=73.4
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCC-CCCCCeeccEEEEEeec---C-----C
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKV-DNWTPVWDDEFTFPLTI---P-----E 537 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~-nn~nPvWNEtf~F~v~~---p-----e 537 (602)
..+.|+|....++|. .+..|.|.+...........|.... .+..-.||++|.+.+.. . +
T Consensus 7 f~~~l~i~~l~~~p~------------~~~~v~v~wkr~~~~~~~~~t~~~~~~~~~v~w~e~~~~~~tl~~~~k~~~~~ 74 (143)
T PF10358_consen 7 FQFDLTIHELENLPS------------SNGKVFVKWKRGDKSKGSGTTSRANVKNGKVQWNEEFSFPCTLYRDKKSKEFQ 74 (143)
T ss_pred EEEEEEEEEeECcCC------------CCCEEEEEEEECCCCccceeeeeeeccccEEEEeeEEEEEEEEEEcCCCCcEe
Confidence 457778888777753 1224445544321111123444332 34567899999998652 1 1
Q ss_pred ccEEEEEEEecCCCCCCCccEEEEEeCCCccCc-----cEEEEccCCCCCccCCeEEEEEEEEEEcc
Q 007473 538 MALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPG-----IHAVPLFDRKGEELGSARLLMRFEFYEAD 599 (602)
Q Consensus 538 la~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~G-----yR~ipL~d~~g~~l~~asL~v~i~~~e~~ 599 (602)
-..+.|.|+.....++...+|.+.|.|...-.- .+.++|... +...|+|.|.|.+.++.
T Consensus 75 ~K~~~~~v~~~~~~~~k~~lG~~~inLaey~~~~~~~~~~~~~l~~~---~~~~a~L~isi~~~~~~ 138 (143)
T PF10358_consen 75 PKELKFSVFEVDGSGKKKVLGKVSINLAEYANEDEEPITVRLLLKKC---KKSNATLSISISLSELR 138 (143)
T ss_pred eEEEEEEEEEecCCCccceEEEEEEEHHHhhCcCCCcEEEEEeCccC---CCCCcEEEEEEEEEECc
Confidence 136889998875333336899999999987542 345666655 45568999999998765
No 215
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=90.28 E-value=0.75 Score=34.98 Aligned_cols=51 Identities=14% Similarity=0.233 Sum_probs=41.0
Q ss_pred CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 39 GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 39 ~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
...|+.++|+.+| ..++....+.+++..|+..+-.. +.+.+++++|..+|.
T Consensus 2 ~G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~-------~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 2 DGKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTD-------GDGYISFDEFISMMQ 52 (54)
T ss_dssp SSEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTS-------SSSSEEHHHHHHHHH
T ss_pred cCEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccC-------CCCCCCHHHHHHHHH
Confidence 3679999999999 55666437889999999998633 357899999999885
No 216
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=90.27 E-value=1.1 Score=38.58 Aligned_cols=64 Identities=19% Similarity=0.238 Sum_probs=50.0
Q ss_pred hHHHHHHHhhC--CCCccCHHHHHHHHHHHhCCCCCCH-HHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 27 DVKEMFKKYAE--GGTHMTAEQLWQFLVEVQGHGGVSI-EDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 27 el~~if~~~~~--~~~~l~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.|..+|+.|.. +..+|+..+|+..|..+=++ .++. +++.++|...-.. +.+.+++++|..+|.+
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~-~ls~~~~v~~mi~~~D~d-------~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPH-LLKDVEGLEEKMKNLDVN-------QDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhh-hccCHHHHHHHHHHhCCC-------CCCCCcHHHHHHHHHH
Confidence 57889999997 46899999999999975344 3566 7899998775421 3568999999988864
No 217
>cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=89.99 E-value=0.35 Score=50.94 Aligned_cols=42 Identities=24% Similarity=0.320 Sum_probs=36.2
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
+.-+.|..+|..|+..||..||+|++=-.| +.+||.|-.||.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l~ 53 (300)
T cd08604 12 DYPGCTDLAYQKAVKDGADVIDCSVQMSKD-GVPFCLDSINLI 53 (300)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEcCC-CCEEEecccccc
Confidence 445889999999999999999999996555 469999998874
No 218
>smart00142 PI3K_C2 Phosphoinositide 3-kinase, region postulated to contain C2 domain. Outlier of C2 family.
Probab=89.66 E-value=1.5 Score=38.44 Aligned_cols=75 Identities=19% Similarity=0.171 Sum_probs=44.6
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcc-cccccCCCCCCCCeeccEEEEEeecCC---ccEEEEE
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKK-MKSTKKKVDNWTPVWDDEFTFPLTIPE---MALLRVE 544 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~-k~kTkvi~nn~nPvWNEtf~F~v~~pe---la~Lrf~ 544 (602)
+.+.+....+.+... ..+..+.||++++......-. ...|+.+.-...+.|||.++|++...+ .|.|.|+
T Consensus 13 ~~~~~~~~~~~~l~~------~~~~~~l~v~~~l~~g~~~l~~pv~t~~~~~~~~~~Wnewl~f~i~i~~LPr~a~L~~~ 86 (100)
T smart00142 13 LVITIALIHGIPLNW------SRDYSDLYVEIQLYHGGKLLCLPVSTSYKPFFPSVKWNEWLTFPIQISDLPREARLCIT 86 (100)
T ss_pred eEEEEEEeeCCCccc------ccCcceEEEEEEEEECCEEccCcEEecccCCCCCcccceeEEccCchhcCChhhEEEEE
Confidence 455555555554321 111147799998874221111 224444333345899999999987544 4899999
Q ss_pred EEecC
Q 007473 545 VRKYS 549 (602)
Q Consensus 545 V~D~d 549 (602)
||+..
T Consensus 87 i~~~~ 91 (100)
T smart00142 87 IYEVK 91 (100)
T ss_pred EEEee
Confidence 99854
No 219
>cd08695 C2_Dock-B C2 domains found in Dedicator Of CytoKinesis (Dock) class B proteins. Dock-B is one of 4 classes of Dock family proteins. The members here include: Dock3/MOCA (modifier of cell adhesion) and Dock4. Most of these members have been shown to be GEFs specific for Rac, although Dock4 has also been shown to interact indirectly with the Ras family GTPase Rap1, probably through Rap regulatory proteins. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-B members contain a SH3 domain upstream of the C2 domain and a proline-rich region downstream. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold int
Probab=89.38 E-value=2 Score=42.15 Aligned_cols=55 Identities=24% Similarity=0.430 Sum_probs=37.0
Q ss_pred ccccccCCCCCCCCeeccEEEEEeecCC--ccEEEEEEEecCCCCCC--CccEEEEEeC
Q 007473 510 KMKSTKKKVDNWTPVWDDEFTFPLTIPE--MALLRVEVRKYSMPEKD--EFAGQTCLPV 564 (602)
Q Consensus 510 ~k~kTkvi~nn~nPvWNEtf~F~v~~pe--la~Lrf~V~D~d~~~~d--d~lGq~~lpL 564 (602)
..++|-+..-+-+|.|+|++...+.... -+.|+|.++......+. ..+|-+.+||
T Consensus 53 se~~S~V~yH~~~P~W~EtiKi~lP~~~~~~~HL~FtfrH~S~~~k~~~~pfg~s~lpL 111 (189)
T cd08695 53 SEYRSFVLYHNNSPRWNETIKLPIPIDKFRGSHLRFEFRHCSTKDKGEKKLFGFSFVPL 111 (189)
T ss_pred ceEEEEEEEcCCCCCCceeEEEecChhhCCCeeEEEEEEEeeeccCCCCCceEEEEEee
Confidence 4567888888899999999988876543 47899988775432211 3345444544
No 220
>PTZ00268 glycosylphosphatidylinositol-specific phospholipase C; Provisional
Probab=89.35 E-value=3.8 Score=44.39 Aligned_cols=107 Identities=19% Similarity=0.257 Sum_probs=69.1
Q ss_pred HHHHHhcCCcEEEEEeecCC-CCCCceEeecccccccchHHHHHHHHhhccccc--CCCceEEEecC---CCCHHHHHHH
Q 007473 144 ITKALKRGVRVIELDLWPNS-AKDDVLVLHGRTLTTPVELIKCLRAIKENAFSA--SPYPVILTFED---HLNPHLQAKV 217 (602)
Q Consensus 144 Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~--S~yPvILSlE~---Hcs~~qQ~~m 217 (602)
...=|..|.|-+.|=|=-.+ +.++-.++||.- .++|.||++.|+++.=.. ..=-|||.+-. +=....|.++
T Consensus 90 I~eQL~~GVRYfDIRV~~~~~~~~~~~~~Hgl~---~~~~~dvL~dv~~FL~~h~~p~EvVILd~~hfy~~~~~~h~~~l 166 (380)
T PTZ00268 90 VRAQLDHGVRYLDLRVATNPEDANRLYISHTQI---SVPLADVLEDVKAFLNDPSSANEFIVLDFQHLYLTDDSDGKGKF 166 (380)
T ss_pred HHHHHhCCeEEEEEEecccCCCCCcEEEEecee---ceEHHHHHHHHHHHHhcCCCCCcEEEEEeecccCCCchHHHHHH
Confidence 34557889999888884322 223456666642 378999999999864221 23457777743 2234555567
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCCChhhcc-----ccEEEecCCC
Q 007473 218 AQMITQTFGAMLYSPESECLKEFPSPEELK-----YRIIISTKPP 257 (602)
Q Consensus 218 a~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk-----~KIlik~K~~ 257 (602)
.+.|+. |||+|. |..... . -+.++|- .+|||-.+.+
T Consensus 167 l~~L~~-~~d~l~-p~~~~~-~-~TL~~LW~~~~~~rVIi~Y~~~ 207 (380)
T PTZ00268 167 FRELDR-LSDRFI-PVDVPL-T-TPLEILWRVSRRRRIFLVVASG 207 (380)
T ss_pred HHHHHH-hcCeec-CCcccc-c-CcHHHHHhcCCCcEEEEEEccc
Confidence 777777 999987 333322 2 3788887 6788887543
No 221
>cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=89.27 E-value=0.43 Score=50.03 Aligned_cols=43 Identities=16% Similarity=0.193 Sum_probs=36.3
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT 178 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 178 (602)
..-+.+..+|..|+..||.-||+||+=-.| +.|||+|=.++..
T Consensus 19 ~~pENTl~Af~~A~~~Gad~vE~DV~lTkD-G~lVv~HD~~l~r 61 (293)
T cd08572 19 GIRENTIASFLAAAKHGADMVEFDVQLTKD-GVPVIYHDFTISV 61 (293)
T ss_pred CcCcccHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCccee
Confidence 345789999999999999999999996555 5799999987743
No 222
>cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation.
Probab=88.84 E-value=0.47 Score=50.38 Aligned_cols=43 Identities=19% Similarity=0.279 Sum_probs=36.6
Q ss_pred cCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007473 135 FSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT 178 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 178 (602)
..-|-|..+|..|+..||.-||+||+=-.| +.|||.|-.|+..
T Consensus 34 ~aPENTl~AF~~A~~~Gad~IE~DV~lTkD-G~lVV~HD~tL~R 76 (316)
T cd08610 34 LAPENTMMSFEKAIEHGAHGLETDVTLSYD-GVPFLMHDFTLKR 76 (316)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEeCCCcccc
Confidence 445888999999999999999999996555 5799999998743
No 223
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=87.95 E-value=1.9 Score=36.75 Aligned_cols=65 Identities=8% Similarity=0.167 Sum_probs=48.6
Q ss_pred hhHHHHHHHhh-CC-CC-ccCHHHHHHHHHHHhCCC---CCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYA-EG-GT-HMTAEQLWQFLVEVQGHG---GVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~-~~-~~-~l~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.+|..+|+.|. .+ .. .|+.++|+..|+..-+.. ..+.+++.+|+..+... ..+.++++.|..++.
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d-------~~G~I~f~eF~~l~~ 79 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDEN-------GDGEVDFQEFVVLVA 79 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCC-------CCCcCcHHHHHHHHH
Confidence 57889999996 54 35 499999999998643331 24678899999987522 246799999998875
No 224
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]
Probab=87.77 E-value=0.33 Score=57.21 Aligned_cols=98 Identities=19% Similarity=0.283 Sum_probs=68.7
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEE-eec--------CCcc
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFP-LTI--------PEMA 539 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~-v~~--------pela 539 (602)
+++-|..|..|..+ ++.+..|||+.|...| +.+.|-++.+++||.|+.+..|. +.. ...-
T Consensus 208 lR~yiyQar~L~a~------dk~~~sdp~a~v~f~~-----qs~~T~~v~~tl~ptwdq~~~f~~~ei~ge~~~~~~~pp 276 (1105)
T KOG1326|consen 208 LRSYIYQARALGAP------DKDDESDPDAAVEFCG-----QSKETEVVPGTLNPTWDQTIIFDEVEIYGEAHLVLKNPP 276 (1105)
T ss_pred hHHHHHHHHhhcCC------CcccCCCchhhhhccc-----ccceeEeecCcCCCCccceeeccceeecCccchhhcCCC
Confidence 44445555555432 3445679999999887 56789999999999999999885 321 1124
Q ss_pred EEEEEEEecCCCCCCCccEEEEEeCCCc-c-CccEEEEcc
Q 007473 540 LLRVEVRKYSMPEKDEFAGQTCLPVFQL-R-PGIHAVPLF 577 (602)
Q Consensus 540 ~Lrf~V~D~d~~~~dd~lGq~~lpL~~L-~-~GyR~ipL~ 577 (602)
.+.|.|+|.|..+.++|.|.......-+ . +--.++|+.
T Consensus 277 i~v~e~yd~dr~g~~ef~gr~~~~p~V~~~~p~lkw~p~~ 316 (1105)
T KOG1326|consen 277 IRVFEVYDLDRSGINEFKGRKKQRPYVMVQCPALKWVPTM 316 (1105)
T ss_pred eEEEEeehhhhhchHHhhcccccceEEEecCCccceEEee
Confidence 6889999999999999999864433322 2 335667765
No 225
>cd08694 C2_Dock-A C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins. Dock-A is one of 4 classes of Dock family proteins. The members here include: Dock180/Dock1, Dock2, and Dock5. Most of these members have been shown to be GEFs specific for Rac. Dock5 has not been well characterized to date, but most likely also is a GEF specific for Rac. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-A members contain a proline-rich region and a SH3 domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=86.80 E-value=3.9 Score=40.33 Aligned_cols=68 Identities=18% Similarity=0.264 Sum_probs=49.3
Q ss_pred ccccccCCCCCCCCeeccEEEEEeecC--CccEEEEEEEecCCCC-C---CCccEEEEEeCC-----CccCccEEEEcc
Q 007473 510 KMKSTKKKVDNWTPVWDDEFTFPLTIP--EMALLRVEVRKYSMPE-K---DEFAGQTCLPVF-----QLRPGIHAVPLF 577 (602)
Q Consensus 510 ~k~kTkvi~nn~nPvWNEtf~F~v~~p--ela~Lrf~V~D~d~~~-~---dd~lGq~~lpL~-----~L~~GyR~ipL~ 577 (602)
..++|-+..-+-+|.|+|++...+... +-+.|+|.++...... + ...+|-+.+||- .|+.|-..++++
T Consensus 53 se~~S~V~Yh~~~P~W~EtIKl~lP~~~~~~~HL~FtfrH~S~~~~kd~~e~pfg~s~lpL~~~~gt~l~dG~H~L~vY 131 (196)
T cd08694 53 DEYKSVIYYQVDKPKWFETFKVAIPIEDFKSSHLRFTFKHRSSNEAKDKSEKPFALSFVKLMQENGTTLTDGEHDLIVY 131 (196)
T ss_pred eeEEEEEEeecCCCCCceeEEEecChhhCCCeEEEEEEEeeccccccCCCCCceEEEEEeeeccCCcEEccCCEEEEEE
Confidence 456777777788999999998887644 3478999997754321 1 246788888884 377888888886
No 226
>PF14429 DOCK-C2: C2 domain in Dock180 and Zizimin proteins; PDB: 3L4C_A.
Probab=86.68 E-value=2.5 Score=41.06 Aligned_cols=67 Identities=21% Similarity=0.304 Sum_probs=37.5
Q ss_pred cccccCCCCCCCCeeccEEEEEeecC--CccEEEEEEEecCCCCCC---CccEEEEEeCCC----ccCccEEEEcc
Q 007473 511 MKSTKKKVDNWTPVWDDEFTFPLTIP--EMALLRVEVRKYSMPEKD---EFAGQTCLPVFQ----LRPGIHAVPLF 577 (602)
Q Consensus 511 k~kTkvi~nn~nPvWNEtf~F~v~~p--ela~Lrf~V~D~d~~~~d---d~lGq~~lpL~~----L~~GyR~ipL~ 577 (602)
...|.+...+-+|.|+|+|..++..+ +-..|.|++++.....+. ..+|.+.+||-. +..|-..+|++
T Consensus 60 ~~~S~v~yh~k~P~f~deiKi~LP~~l~~~~HLlFtf~h~s~~~~~~~~~~~g~a~lpL~~~g~~i~dg~~~L~v~ 135 (184)
T PF14429_consen 60 SYYSSVYYHNKNPQFNDEIKIQLPPDLFPKHHLLFTFYHVSCKESKEKSKPFGYAFLPLMDNGTIIQDGEHELPVY 135 (184)
T ss_dssp -EE----TT-SS-EEEEEEEEEE-CCCCTTEEEEEEEEE---SSSS-SS-EEEEEEEESB-TS-B--SEEEEEEEE
T ss_pred EEEEEEEecCCCCCccEEEEEEcCchhcccEEEEEEEEeeccccccCccceeEEEEEEeeeCCeEecCCCEEEEEE
Confidence 45677777778999999998887643 346899999986543211 577777777764 33456667765
No 227
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=86.46 E-value=0.93 Score=33.73 Aligned_cols=28 Identities=21% Similarity=0.437 Sum_probs=24.2
Q ss_pred hHHHHHHHhh---CCCCccCHHHHHHHHHHH
Q 007473 27 DVKEMFKKYA---EGGTHMTAEQLWQFLVEV 54 (602)
Q Consensus 27 el~~if~~~~---~~~~~l~~~~~~~Fl~~~ 54 (602)
-|..+|.+|| ++...|+..+|+..|+++
T Consensus 7 ~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~E 37 (44)
T PF01023_consen 7 TIIDVFHKYAGKEGDKDTLSKKELKELLEKE 37 (44)
T ss_dssp HHHHHHHHHHTSSSSTTSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCeEcHHHHHHHHHHH
Confidence 4778999999 567999999999999864
No 228
>COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=86.28 E-value=0.78 Score=46.70 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=32.9
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccc
Q 007473 138 DCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRT 175 (602)
Q Consensus 138 ~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~T 175 (602)
+-|.++|..|+..|+.+||+|+.=-.| +.+||+|=+|
T Consensus 20 ENTl~Af~~A~~~gad~iE~Dv~lTkD-g~lVv~HD~~ 56 (257)
T COG0584 20 ENTLAAFELAAEQGADYIELDVQLTKD-GVLVVIHDET 56 (257)
T ss_pred cchHHHHHHHHHcCCCEEEeeccCccC-CcEEEecccc
Confidence 778999999999999999999997666 5799999883
No 229
>cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins. This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos
Probab=86.16 E-value=0.95 Score=47.69 Aligned_cols=52 Identities=8% Similarity=-0.010 Sum_probs=38.6
Q ss_pred cccccCCcccccCCccCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007473 120 YFIYTGHNSYLIGNQFSSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLTT 178 (602)
Q Consensus 120 YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 178 (602)
||=|+|-.. ..|. ++...++.|...|++-||+||+=-.| +.|||||-+++..
T Consensus 3 YWKst~~~~---~~~~---~~~~sfvtAsslgad~VE~DVqLTkD-gvpVV~HD~~i~~ 54 (300)
T cd08578 3 YWKSTSGSD---TQAN---KDGNSFVTASSLSGEYLRVKVCVLKD-GTPVVAPEWFVPV 54 (300)
T ss_pred ccccCCCcc---cccC---CCchhHHHHHHcCCCEEEEEEEECcC-CEEEEECCCceEe
Confidence 777776522 1111 46789999999999999999995444 4699999998743
No 230
>cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=85.79 E-value=0.75 Score=46.69 Aligned_cols=39 Identities=28% Similarity=0.355 Sum_probs=33.4
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
-+-+..+|..|+..|+ -||+||+=-.| +.|||+|=.|+.
T Consensus 20 pENTl~af~~A~~~G~-~iE~DV~lT~D-g~lVv~HD~~l~ 58 (237)
T cd08585 20 PENSLSAFRAAAEAGY-GIELDVQLTAD-GEVVVFHDDNLK 58 (237)
T ss_pred CccHHHHHHHHHHcCC-cEEEEeeECCC-CCEEEeccchHh
Confidence 4678999999999999 89999997655 579999998864
No 231
>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.
Probab=85.69 E-value=0.8 Score=48.38 Aligned_cols=39 Identities=28% Similarity=0.494 Sum_probs=34.5
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 138 DCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 138 ~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
+-++++|..|+..|+..||+||+--.| +.+||.|=.||.
T Consensus 60 ENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVV~HD~tL~ 98 (309)
T cd08613 60 ENTIASMQAAFDAGADVVELDVHPTKD-GEFAVFHDWTLD 98 (309)
T ss_pred chHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEecCccc
Confidence 778999999999999999999997655 569999999874
No 232
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=85.51 E-value=2.6 Score=33.13 Aligned_cols=64 Identities=20% Similarity=0.470 Sum_probs=42.8
Q ss_pred HHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHh
Q 007473 28 VKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYL 96 (602)
Q Consensus 28 l~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L 96 (602)
|..+|+.|=.+ ...|+.++|..+++..... .+.+...+.++..-+... .-+.+.+++++|..++
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~--~~~~~~~~~~~~~~~~~D---~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRD--MSDEESDEMIDQIFREFD---TDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSH--STHHHHHHHHHHHHHHHT---TTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhccc--ccHHHHHHHHHHHHHHhC---CCCcCCCcHHHHhccC
Confidence 67899999544 6899999999999987643 234444555444322111 1135789999999875
No 233
>PF15627 CEP76-C2: CEP76 C2 domain
Probab=85.51 E-value=12 Score=35.75 Aligned_cols=126 Identities=13% Similarity=0.112 Sum_probs=83.1
Q ss_pred cceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC------c
Q 007473 465 VKKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE------M 538 (602)
Q Consensus 465 ~~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe------l 538 (602)
....|.|+|+.|+-..... .+.-+..+..+.+.++- ..++++|+.+.-..+|.|+|.|-|++.... .
T Consensus 7 ~~~yL~l~vlgGkAFld~l----~~~~~~~~s~~~l~l~f---~~QRF~S~~Vp~~~eP~f~e~Flf~l~~~~~~~~~~~ 79 (156)
T PF15627_consen 7 GRRYLHLRVLGGKAFLDHL----QEPEGQVCSTFTLHLHF---RGQRFRSKPVPCACEPDFNEEFLFELPRDSFGAGSTA 79 (156)
T ss_pred CceEEEEEEeCchhHhhhh----hccCCCCceEEEEEEEe---cCceEecCCcccccCCCCCCcEEEEecccccccccch
Confidence 4567999999987442110 00002234444555442 137889999999999999999999986442 1
Q ss_pred -------cEEEEEEEecCCCCCCCccEEEEEeCCCc-cCccE----EEEccCCCCC-ccCCeEEEEEEEEEE
Q 007473 539 -------ALLRVEVRKYSMPEKDEFAGQTCLPVFQL-RPGIH----AVPLFDRKGE-ELGSARLLMRFEFYE 597 (602)
Q Consensus 539 -------a~Lrf~V~D~d~~~~dd~lGq~~lpL~~L-~~GyR----~ipL~d~~g~-~l~~asL~v~i~~~e 597 (602)
.-|.+.|--.|..+...++|...+.-..+ ..|+. .|.|....++ ..+-+.|-+++++..
T Consensus 80 ~~lls~~~pihivli~~d~~~~~~Lv~s~~ldWR~vL~s~~~~~~~~vEL~G~~~e~kv~~GiL~l~lELlP 151 (156)
T PF15627_consen 80 TTLLSISDPIHIVLIRTDPSGETTLVGSHFLDWRKVLCSGNGSTSFTVELCGVGPESKVPVGILDLRLELLP 151 (156)
T ss_pred hHhhcCCCceEEEEEEecCCCceEeeeeceehHHHHhccCCCccceeEEEeccCCCCccceeEEEEEEEeec
Confidence 23677777767666568999988877654 56664 4677776655 456677878887653
No 234
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=84.95 E-value=4.5 Score=29.97 Aligned_cols=60 Identities=18% Similarity=0.406 Sum_probs=45.2
Q ss_pred HHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHh
Q 007473 28 VKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYL 96 (602)
Q Consensus 28 l~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L 96 (602)
+..+|..|-.+ ...|+.++|...++... . ..+.+.+..++.++... ..+.+++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~~~~-------~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG-E-GLSEEEIDEMIREVDKD-------GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHh
Confidence 67789988755 46899999999998643 3 35677788888887532 23579999998876
No 235
>cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti
Probab=84.93 E-value=0.99 Score=48.61 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=35.0
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
.-|-+..+|..|+..||.-||+|++=-.| +.|||.|-.|+.
T Consensus 14 aPENTL~AF~~A~~~GaD~IElDV~lTkD-GvlVV~HD~tL~ 54 (351)
T cd08608 14 APENTLMSFQKALEQKVYGLQADVTISLD-GVPFLMHDRTLR 54 (351)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 34778999999999999999999996555 469999998874
No 236
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=84.77 E-value=4 Score=35.10 Aligned_cols=61 Identities=15% Similarity=0.212 Sum_probs=46.9
Q ss_pred hhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.++..+|..+-.+ ...|+.++|..+|+. . ..+.+++..|+..+... ..+.+++++|..+|.
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~-~---~~~~~ev~~i~~~~d~~-------~~g~I~~~eF~~~~~ 71 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLK-S---GLPQTLLAKIWNLADID-------NDGELDKDEFALAMH 71 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHH-c---CCCHHHHHHHHHHhcCC-------CCCCcCHHHHHHHHH
Confidence 4677788888654 578999999999987 2 25778888888876521 246799999998775
No 237
>KOG1327 consensus Copine [Signal transduction mechanisms]
Probab=84.67 E-value=1.3 Score=49.75 Aligned_cols=81 Identities=15% Similarity=0.224 Sum_probs=59.1
Q ss_pred CCCCCCCceEEEEEe-cCCCCcccccccCCCCCCCCeeccEE-EEE-eecCC-ccEEEEEEEecCCCCCCCccEEEEEeC
Q 007473 489 KFWSPPQFYTRVGIA-GVPADKKMKSTKKKVDNWTPVWDDEF-TFP-LTIPE-MALLRVEVRKYSMPEKDEFAGQTCLPV 564 (602)
Q Consensus 489 d~~s~~DpyV~V~i~-G~p~d~~k~kTkvi~nn~nPvWNEtf-~F~-v~~pe-la~Lrf~V~D~d~~~~dd~lGq~~lpL 564 (602)
+.++.+|||.++.-. +.......++|.+++++.||.|-... ... +...+ -+.+.+.+||++..++++++|++..++
T Consensus 152 d~f~ksd~~l~~~~~~~d~s~~~~~~tEv~~n~l~p~w~~~~i~~~~l~~~~~~~~~~i~~~d~~~~~~~~~ig~~~tt~ 231 (529)
T KOG1327|consen 152 DFFSKSDPYLEFYKRVDDGSTQMLYRTEVVKNTLNPQWAPFSISLQSLCSKDGNRPIQIECYDYDSNGKHDLIGKFQTTL 231 (529)
T ss_pred cccccCCcceEEEEecCCCceeeccccceeccCCCCcccccccchhhhcccCCCCceEEEEeccCCCCCcCceeEecccH
Confidence 567889999887644 33333345799999999999997532 221 22222 356889999999888789999999999
Q ss_pred CCccC
Q 007473 565 FQLRP 569 (602)
Q Consensus 565 ~~L~~ 569 (602)
..++.
T Consensus 232 ~~~~~ 236 (529)
T KOG1327|consen 232 SELQE 236 (529)
T ss_pred HHhcc
Confidence 98864
No 238
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=84.23 E-value=5.2 Score=34.19 Aligned_cols=64 Identities=8% Similarity=0.185 Sum_probs=47.1
Q ss_pred hHHHHHHHhhC-C-CC-ccCHHHHHHHHHHHh---CCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 27 DVKEMFKKYAE-G-GT-HMTAEQLWQFLVEVQ---GHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 27 el~~if~~~~~-~-~~-~l~~~~~~~Fl~~~Q---~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
+|..+|+.|.+ + .. .|+.++|+..|+.+= .....+.+++.+++...-.. +.+.++++.|..++.
T Consensus 9 ~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n-------~dG~v~f~eF~~li~ 78 (88)
T cd05027 9 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSD-------GDGECDFQEFMAFVA 78 (88)
T ss_pred HHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHH
Confidence 68899999973 4 45 599999999998611 11235778899999876421 346899999998875
No 239
>cd08679 C2_DOCK180_related C2 domains found in Dedicator Of CytoKinesis 1 (DOCK 180) and related proteins. Dock180 was first identified as an 180kd proto-oncogene product c-Crk-interacting protein involved in actin cytoskeletal changes. It is now known that it has Rac-specific GEF activity, but lacks the conventional Dbl homology (DH) domain. There are 10 additional related proteins that can be divided into four classes based on sequence similarity and domain organization: Dock-A which includes Dock180/Dock1, Dock2, and Dock5; Dock-B which includes Dock3/MOCA (modifier of cell adhesion) and Dock4; Dock-C which includes Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3; and Dock-D, which includes Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Most of members of classes Dock-A and Dock-B are the GEFs specific for Rac. Those of Dock-D are Cdc42-specific GEFs while those of Dock-C are the GEFs for both. All Dock180-related proteins have two common homolo
Probab=84.06 E-value=2.4 Score=41.05 Aligned_cols=66 Identities=21% Similarity=0.341 Sum_probs=47.6
Q ss_pred cccCCCCCCCCeeccEEEEEeecC--CccEEEEEEEecCCCC-----CCCccEEEEEeCCC-----ccCccEEEEccC
Q 007473 513 STKKKVDNWTPVWDDEFTFPLTIP--EMALLRVEVRKYSMPE-----KDEFAGQTCLPVFQ-----LRPGIHAVPLFD 578 (602)
Q Consensus 513 kTkvi~nn~nPvWNEtf~F~v~~p--ela~Lrf~V~D~d~~~-----~dd~lGq~~lpL~~-----L~~GyR~ipL~d 578 (602)
-|.++..+-+|.|+|++...+... +...|.|++++.+... ....+|-+.+||-. ++.|...+|++-
T Consensus 55 ~~sv~~~~k~p~f~deiKi~LP~~l~~~~HLlFtf~hv~~~~~~~~~~~~~~g~a~lpL~~~~g~~i~dg~~~L~v~k 132 (178)
T cd08679 55 YTSVVYYHKNPVFNDEIKIQLPADLTPQHHLLFTFYHVSSKKKQGDKEETPFGYAFLPLMDKDGAFIKDGDHTLPVYK 132 (178)
T ss_pred EEEEEEcCCCCCCceeEEEecCCccCCCeEEEEEEEccccccccCCCccceEEEEEEeccccCCcEEcCCCEEEEEEe
Confidence 344444458899999998887543 3468999999865332 25678888899887 677888888763
No 240
>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=83.80 E-value=1.2 Score=48.17 Aligned_cols=40 Identities=15% Similarity=0.240 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecc-cc
Q 007473 136 SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGR-TL 176 (602)
Q Consensus 136 ~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~-Tl 176 (602)
.-|-|.++|..|+.+|+.-||+|++=-.| +.|||.|-. +|
T Consensus 29 ~PEnTl~Af~~Ai~~Gad~IE~DV~lTkD-g~lVV~HD~~~L 69 (356)
T cd08560 29 FPEHTRESYEAAARMGAGILECDVTFTKD-RELVCRHSQCDL 69 (356)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 34788999999999999999999996555 469999995 44
No 241
>KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=83.51 E-value=1.5 Score=47.12 Aligned_cols=40 Identities=28% Similarity=0.346 Sum_probs=35.1
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007473 137 SDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT 177 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 177 (602)
-+.|..+|.+|...|+.|||+|+-...| +.+|+.|--|..
T Consensus 82 penT~~A~~~a~~~Gad~ie~dV~~TsD-g~~v~l~d~~~~ 121 (341)
T KOG2258|consen 82 PENTLAAYKKAIADGADLIELDVQMTSD-GVPVILHDSTTV 121 (341)
T ss_pred CcccHHHHHHHHHcCCcEEEeccccCCC-CceEEeecCcce
Confidence 4678999999999999999999999887 578999976655
No 242
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=82.72 E-value=2.5 Score=36.50 Aligned_cols=63 Identities=17% Similarity=0.178 Sum_probs=39.2
Q ss_pred HHHHHHHhhCCCCccCHHHHHHHHHHHhCCCC-----C----CHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 28 VKEMFKKYAEGGTHMTAEQLWQFLVEVQGHGG-----V----SIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 28 l~~if~~~~~~~~~l~~~~~~~Fl~~~Q~~~~-----~----~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.+++|+.+++....|+...|..||.+..+-+. . .+..+++.++.- ..+..++.+.|+.+|++
T Consensus 5 yRylFslisd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~---------~~~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 5 YRYLFSLISDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV---------QLSPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHHHS-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT---------TT-S-B-HHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc---------CCCCccCHHHHHHHHHh
Confidence 57899999988899999999999998775431 1 122233333321 02467999999999997
Q ss_pred C
Q 007473 99 T 99 (602)
Q Consensus 99 ~ 99 (602)
.
T Consensus 76 e 76 (90)
T PF09069_consen 76 E 76 (90)
T ss_dssp -
T ss_pred C
Confidence 3
No 243
>PTZ00183 centrin; Provisional
Probab=82.11 E-value=5.4 Score=36.71 Aligned_cols=66 Identities=12% Similarity=0.315 Sum_probs=50.7
Q ss_pred CchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 24 PPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 24 ~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
...++..+|..|-.+ ...|+.++|..+|...+ . .++.+++..++..+... +.+.++++.|..++..
T Consensus 88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~-~-~l~~~~~~~~~~~~d~~-------~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 88 PREEILKAFRLFDDDKTGKISLKNLKRVAKELG-E-TITDEELQEMIDEADRN-------GDGEISEEEFYRIMKK 154 (158)
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHhc
Confidence 346788999988654 47899999999998654 3 36788899999887632 2456999999998864
No 244
>PTZ00184 calmodulin; Provisional
Probab=81.97 E-value=5.2 Score=36.20 Aligned_cols=65 Identities=15% Similarity=0.354 Sum_probs=47.1
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
+..+..+|..|-.+ ...|+.++|..+|..... ..+.+.+..++.++... +.+.+++++|..+|.+
T Consensus 83 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--~~~~~~~~~~~~~~d~~-------~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 83 EEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE--KLTDEEVDEMIREADVD-------GDGQINYEEFVKMMMS 148 (149)
T ss_pred HHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC--CCCHHHHHHHHHhcCCC-------CCCcCcHHHHHHHHhc
Confidence 45677888888654 477999999999987532 35677788888765421 2457999999998875
No 245
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=80.22 E-value=7.5 Score=33.29 Aligned_cols=66 Identities=12% Similarity=0.220 Sum_probs=49.2
Q ss_pred hhHHHHHHHhhC-C--CCccCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 26 ADVKEMFKKYAE-G--GTHMTAEQLWQFLVEVQGH---GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 26 ~el~~if~~~~~-~--~~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.++...|..|.. + ...|+.++|+..|+...+. ...+.+++..++..+... +.+.++++.|..++.+
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~-------~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQN-------RDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHHH
Confidence 578889999975 4 3799999999999863321 134678889999876522 3468999999988753
No 246
>PF05386 TEP1_N: TEP1 N-terminal domain; InterPro: IPR008850 Telomerase protein component 1 (TP1/TLP1) or TEP1 is a protein component of two ribonucleoprotein (RNP) complexes: vaults and telomerase. Vaults are large RNP particles with a barrel-like structure (IPR002499 from INTERPRO). The telomerase RNP replenishes incomplete chromosome termini due to DNA replication. Mammalian TEP1 is an RNA-binding protein and is required for the association of vault RNA with the vault particle [, ]. The N-terminal part of TEP1 contains 4 copies of the TEP1 N-terminal repeat in tandem. The repeat is composed of 30 amino acids and occurs in combination with the TROVE (IPR008858 from INTERPRO) and NACHT (IPR007111 from INTERPRO) domains and with WD-40 repeats (see IPR001680 from INTERPRO) in the C-terminal part.
Probab=80.19 E-value=0.39 Score=32.16 Aligned_cols=14 Identities=36% Similarity=0.513 Sum_probs=12.8
Q ss_pred cCCCceEEEecCCC
Q 007473 196 ASPYPVILTFEDHL 209 (602)
Q Consensus 196 ~S~yPvILSlE~Hc 209 (602)
.|.+|=||||||.|
T Consensus 8 ~sahpdILSLeNrC 21 (30)
T PF05386_consen 8 VSAHPDILSLENRC 21 (30)
T ss_pred ccCCcchhhhhhhH
Confidence 57899999999999
No 247
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=79.41 E-value=8.6 Score=32.26 Aligned_cols=67 Identities=13% Similarity=0.216 Sum_probs=48.8
Q ss_pred chhHHHHHHHhhC--C-CCccCHHHHHHHHHHHhCCC---CCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAE--G-GTHMTAEQLWQFLVEVQGHG---GVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~--~-~~~l~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..++..+|..|-. + ...|+.++|..+++..=+.. ..+.+.+..++..+... +.+.+++++|+.+|..
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~-------~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVN-------KDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccC-------CCCcCcHHHHHHHHHH
Confidence 3568888999987 4 57899999999997521221 13577788888877522 2468999999998863
No 248
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=77.77 E-value=11 Score=29.34 Aligned_cols=58 Identities=17% Similarity=0.244 Sum_probs=43.0
Q ss_pred HHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 29 KEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 29 ~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
..+|..+-.+ ...++.++|..+|... + .+.+.+..++..+... ..+.++++.|...+.
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~-g---~~~~~~~~i~~~~d~~-------~~g~i~~~ef~~~~~ 60 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKS-G---LPRSVLAQIWDLADTD-------KDGKLDKEEFAIAMH 60 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHc-C---CCHHHHHHHHHHhcCC-------CCCcCCHHHHHHHHH
Confidence 3578887654 5889999999999863 2 3677888998877532 246799999987763
No 249
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=77.72 E-value=4.9 Score=38.08 Aligned_cols=63 Identities=22% Similarity=0.354 Sum_probs=47.4
Q ss_pred HHHHHHHhh----CCCCccCHHHHHHHHHHHhCC-CCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 28 VKEMFKKYA----EGGTHMTAEQLWQFLVEVQGH-GGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 28 l~~if~~~~----~~~~~l~~~~~~~Fl~~~Q~~-~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
|+.+|..|+ .+...|+-..|.+++++.+=- ..++..++.-|+.++... ..+.|++++|...|-
T Consensus 1 L~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k-------~~~~I~f~~F~~aL~ 68 (154)
T PF05517_consen 1 LEAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAK-------GARKITFEQFLEALA 68 (154)
T ss_dssp HHHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-S-------S-SEEEHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcC-------CCcccCHHHHHHHHH
Confidence 578899995 556899999999999998732 237888999999997622 123599999998884
No 250
>PF12416 DUF3668: Cep120 protein; InterPro: IPR022136 This domain family is found in eukaryotes, and is typically between 75 and 114 amino acids in length.
Probab=76.58 E-value=25 Score=37.84 Aligned_cols=117 Identities=10% Similarity=0.111 Sum_probs=79.2
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC-------ccEE
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE-------MALL 541 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe-------la~L 541 (602)
+-|.|+.|.+.+.. + .-...|+..+.| ....|..+..+-.|.||..+-|.+..-. -.-|
T Consensus 2 ivl~i~egr~F~~~-~--------~~~~vv~a~~ng-----~~l~TDpv~~~~~p~f~teL~WE~Dr~~l~~~r~~~tPi 67 (340)
T PF12416_consen 2 IVLSILEGRNFPQR-P--------RHPIVVEAKFNG-----ESLETDPVPHTESPQFNTELAWECDRKALKQHRLQRTPI 67 (340)
T ss_pred EEEEEecccCCCCC-C--------CccEEEEEEeCC-----ceeeecCCCCCCCceeecceeeeccHHHHHHhhccCCce
Confidence 45778888887642 0 012355555555 4556777777789999999999876322 2458
Q ss_pred EEEEEecC-CCCCCCccEEEEEeCCCc---cCc-----cEEEEccCCCCCcc-CCeEEEEEEEEEEcc
Q 007473 542 RVEVRKYS-MPEKDEFAGQTCLPVFQL---RPG-----IHAVPLFDRKGEEL-GSARLLMRFEFYEAD 599 (602)
Q Consensus 542 rf~V~D~d-~~~~dd~lGq~~lpL~~L---~~G-----yR~ipL~d~~g~~l-~~asL~v~i~~~e~~ 599 (602)
++..+..| ..+..+.+|...++|.+. ..| .+|.+|...+++-- ..-.|++-+.+..+.
T Consensus 68 Kl~c~a~~~~~~~re~iGyv~LdLRsa~~~~~~~~~~~~~W~~LL~~~~~y~~~KPEl~l~l~ie~~~ 135 (340)
T PF12416_consen 68 KLQCFAVDGSTGKRESIGYVVLDLRSAVVPQEKNQKQKPKWYKLLSSSSKYKKHKPELLLSLSIEDDS 135 (340)
T ss_pred EEEEEEecCCCCcceeccEEEEEccccccccccccccCCCeeEccccccccccCCccEEEEEEEeccc
Confidence 88888877 455688999999999999 555 78999987744311 124566666665543
No 251
>KOG0904 consensus Phosphatidylinositol 3-kinase catalytic subunit (p110) [Signal transduction mechanisms]
Probab=74.35 E-value=15 Score=43.60 Aligned_cols=100 Identities=21% Similarity=0.238 Sum_probs=57.6
Q ss_pred eeEEEEEEeccCcccCccCcCCCCCCCCCceEEE--EEe-cCCCCcccccccCCCCCCCCeeccEEEEEeecCC---ccE
Q 007473 467 KTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRV--GIA-GVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE---MAL 540 (602)
Q Consensus 467 ~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V--~i~-G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe---la~ 540 (602)
..++|+++++.+.-.+ . ..|-+|.| .+. |...=+..+.|.-+...-+|.||+.++|++...+ .|.
T Consensus 343 ~~frI~l~~is~~n~~--~-------t~~~kV~V~~~lyhG~e~Lc~~~sTs~v~~~~~~~Wn~~leFDI~i~DLPr~Ar 413 (1076)
T KOG0904|consen 343 RPFRIKLVGISKVNLP--E-------TVDLKVFVEAGLYHGTEVLCKTRSTSEVPGCSFPLWNEWLEFDIYIKDLPRMAR 413 (1076)
T ss_pred CceEEEEeeccccCCC--c-------ccceEEEEEEEEEECCeehhcccccCCCCCccchhccceeEeeeecCCCChhhh
Confidence 3488888888765322 1 12334444 443 3211112244554444568999999999987544 577
Q ss_pred EEEEEEecC----------------CCCCCCccEEEEEeCC----CccCccEEEE
Q 007473 541 LRVEVRKYS----------------MPEKDEFAGQTCLPVF----QLRPGIHAVP 575 (602)
Q Consensus 541 Lrf~V~D~d----------------~~~~dd~lGq~~lpL~----~L~~GyR~ip 575 (602)
|.|.|+.-- .....-.+|++-+-|- .||.|-+.+.
T Consensus 414 Lc~~i~~v~~~~~s~~~s~~~~~kk~k~~~~plaWvN~~lfD~kd~LrtG~~~Lh 468 (1076)
T KOG0904|consen 414 LCLAIYAVKAKAKSKKNSAESTKKKSKKEHCPLAWVNLMLFDHKDQLRTGEYVLH 468 (1076)
T ss_pred heeeeeEeechhccccccchhhhhccccccCceEEEeeeeeechhhhhcCceEEE
Confidence 888876531 1122346788777654 4778865543
No 252
>cd08603 GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=73.67 E-value=3.6 Score=43.31 Aligned_cols=41 Identities=17% Similarity=0.027 Sum_probs=34.5
Q ss_pred CCCChHHHHHHHhcCCc--EEEEEeecCCCCCCceEeecccccc
Q 007473 137 SDCSDVPITKALKRGVR--VIELDLWPNSAKDDVLVLHGRTLTT 178 (602)
Q Consensus 137 g~Ss~e~Y~~aL~~GCR--cvElD~WdG~~~~~piv~HG~Tlts 178 (602)
-+.+.++|..|+..|+. -||+|++=-.| +.|||.|..+|..
T Consensus 14 PEnTl~Ay~~Ai~~Ga~~d~IE~DV~lTkD-gvlVv~HD~~L~r 56 (299)
T cd08603 14 PDSSLFAYQFAASSSSPDVALWCDLQLTKD-GVGICLPDLNLDN 56 (299)
T ss_pred CcchHHHHHHHHHcCCCCCEEEEEeeECcC-CcEEEeCCccccc
Confidence 47889999999999995 69999996555 4699999988743
No 253
>cd08621 PI-PLCXDc_like_2 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=65.66 E-value=16 Score=38.45 Aligned_cols=92 Identities=18% Similarity=0.199 Sum_probs=58.6
Q ss_pred CCcccccccccCCcccc---cCCc----c---CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc------
Q 007473 114 TAPLSHYFIYTGHNSYL---IGNQ----F---SSDCSDVPITKALKRGVRVIELDLWPNSAKDDVLVLHGRTLT------ 177 (602)
Q Consensus 114 ~~PLs~YfI~SSHNTYL---~g~Q----l---~g~Ss~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt------ 177 (602)
+.||++-.|=-|||+.- .+.- + .+..--.....=|..|+|-+.|-+=-..+ ++-.++||.-..
T Consensus 6 ~~~L~~l~iPGTHdS~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRyfDlRv~~~~~-~~~~~~H~~~~~~~~~G~ 84 (300)
T cd08621 6 DRPLRHIVMPGTHDSGMSSLTGGLWPVDGNDSNTQTQGLSIYDQLRAGARYFDIRPVITHG-GELWTGHYNGEDASAQGA 84 (300)
T ss_pred CeEhhhccccccchhccccccCCCccccccccccccCCCCHHHHHhcCCcEEEEEEEEcCC-CcEEEEecccccccccCc
Confidence 47999999999999852 2221 0 11122223456688999998888743222 345788876532
Q ss_pred ccchHHHHHHHHhhcccccCCCceEEEec
Q 007473 178 TPVELIKCLRAIKENAFSASPYPVILTFE 206 (602)
Q Consensus 178 s~i~f~dvi~aI~~~AF~~S~yPvILSlE 206 (602)
+..+|.|||+.|+++.=....=-|||.+-
T Consensus 85 ~~~~l~~vL~~v~~Fl~~~p~EvViL~~~ 113 (300)
T cd08621 85 NGESLDDILDEVNRFTDENPGELVILNFS 113 (300)
T ss_pred CCCcHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 25899999999999643222233667665
No 254
>KOG4306 consensus Glycosylphosphatidylinositol-specific phospholipase C [Signal transduction mechanisms]
Probab=64.49 E-value=26 Score=36.84 Aligned_cols=93 Identities=25% Similarity=0.369 Sum_probs=59.0
Q ss_pred HHHhcCCcEEEEEee---cCCCCCCceEeecccccccchHHHHHHHHhhcccccCCCceEEEecCCC----CHHHHHHHH
Q 007473 146 KALKRGVRVIELDLW---PNSAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHL----NPHLQAKVA 218 (602)
Q Consensus 146 ~aL~~GCRcvElD~W---dG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hc----s~~qQ~~ma 218 (602)
.=|..|.|-.-|-+= +++| .+--|+||-+.| ++..+|+.-|+++-= .++==||| ||..- ...--..+.
T Consensus 74 ~QL~~GvRylDlRi~~~~~~~D-~~~~i~HGl~~~--~~v~~vL~ev~~Fl~-~h~eEVVi-L~f~~~fg~~~~~h~~l~ 148 (306)
T KOG4306|consen 74 EQLVAGVRYLDLRIGYKLMDPD-REFYICHGLFST--YPVLEVLNEVRQFLS-EHPEEVVI-LEFRHFFGMTEPHHRKLV 148 (306)
T ss_pred HHHhhcceEEEEEeeeccCCCC-cceEEEeecccc--ccHHHHHHHHHHHHH-hCCCEEEE-EeccchhccCccHHHHHH
Confidence 446789999777775 2233 234799995554 455788888887432 23333333 55432 566677888
Q ss_pred HHHHHHhhcccCCCCCCCCCCCCChhhc
Q 007473 219 QMITQTFGAMLYSPESECLKEFPSPEEL 246 (602)
Q Consensus 219 ~~l~~~~Gd~L~~~~~~~~~~lPSP~~L 246 (602)
..+++.||++|+.+. ...-|+.++|
T Consensus 149 ~~ik~~~g~~l~~d~---~~~~~~lr~L 173 (306)
T KOG4306|consen 149 LVIKQGFGDILCDDS---LFEKPTLREL 173 (306)
T ss_pred HHHHHHhcccccChh---hcccccHHHH
Confidence 889999999999432 2333455544
No 255
>KOG0906 consensus Phosphatidylinositol 3-kinase VPS34, involved in signal transduction [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=61.19 E-value=8.3 Score=44.17 Aligned_cols=84 Identities=20% Similarity=0.358 Sum_probs=56.2
Q ss_pred CCceEEEEEecCCCCc-ccccccCCCCCCCCeeccEEEEEeecCCc---cEEEEEEEecCCCCCCCccEEEEEeCCC---
Q 007473 494 PQFYTRVGIAGVPADK-KMKSTKKKVDNWTPVWDDEFTFPLTIPEM---ALLRVEVRKYSMPEKDEFAGQTCLPVFQ--- 566 (602)
Q Consensus 494 ~DpyV~V~i~G~p~d~-~k~kTkvi~nn~nPvWNEtf~F~v~~pel---a~Lrf~V~D~d~~~~dd~lGq~~lpL~~--- 566 (602)
+|.||+..+...+... .--+|+-+.-.-.-.|||-+++.+..+++ |.+.+++||........|+|+.++.+..
T Consensus 47 ~~l~~~c~v~~~~~~~~lP~~ts~~~~~~~~~wnewLtlpvky~dLt~~a~l~itiW~~n~~~~~~~vg~~t~~lf~k~~ 126 (843)
T KOG0906|consen 47 SDLYVTCQVFAEGKPFALPVRTSYKAFSKRINWNEWLTLPVKYSDLTRNAQLAITIWDVNGPKKAVFVGGTTVSLFGKYG 126 (843)
T ss_pred hhhhheeeeeccCCcccCCccccccccCCccchhhhhccccccccccccceEEEEEEecCCCceeeeccceEEEeecccc
Confidence 5677777666432111 01123222111112399999999998887 6899999998766668899998887654
Q ss_pred -ccCccEEEEcc
Q 007473 567 -LRPGIHAVPLF 577 (602)
Q Consensus 567 -L~~GyR~ipL~ 577 (602)
+++|..-++|.
T Consensus 127 ~lk~G~~~l~~~ 138 (843)
T KOG0906|consen 127 MLKQGMQDLKLW 138 (843)
T ss_pred hHhhhhhhcccc
Confidence 68898888875
No 256
>PTZ00183 centrin; Provisional
Probab=57.13 E-value=41 Score=30.72 Aligned_cols=63 Identities=13% Similarity=0.257 Sum_probs=45.2
Q ss_pred hhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 26 ADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 26 ~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
.++..+|..+-.+ ...|+.++|..+|+... . ..+...+..++..+... +.+.+++++|...+.
T Consensus 17 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g-~-~~~~~~~~~l~~~~d~~-------~~g~i~~~eF~~~~~ 80 (158)
T PTZ00183 17 KEIREAFDLFDTDGSGTIDPKELKVAMRSLG-F-EPKKEEIKQMIADVDKD-------GSGKIDFEEFLDIMT 80 (158)
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC-------CCCcEeHHHHHHHHH
Confidence 4566678777644 47899999999998653 3 24566777777776421 246799999998775
No 257
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=56.54 E-value=15 Score=24.57 Aligned_cols=27 Identities=15% Similarity=0.455 Sum_probs=23.0
Q ss_pred hHHHHHHHhhCC-CCccCHHHHHHHHHH
Q 007473 27 DVKEMFKKYAEG-GTHMTAEQLWQFLVE 53 (602)
Q Consensus 27 el~~if~~~~~~-~~~l~~~~~~~Fl~~ 53 (602)
||..+|+.|=.+ ...++.++|...|++
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 688999999654 589999999999864
No 258
>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism]
Probab=56.33 E-value=16 Score=43.43 Aligned_cols=100 Identities=15% Similarity=0.210 Sum_probs=72.9
Q ss_pred CCceEEEEEecCCCCcccccccCCCCC-CCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCcc-
Q 007473 494 PQFYTRVGIAGVPADKKMKSTKKKVDN-WTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGI- 571 (602)
Q Consensus 494 ~DpyV~V~i~G~p~d~~k~kTkvi~nn-~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~Gy- 571 (602)
.++|+++.+... .-.+|..+.+. -+|.|.+.|+.-+... .+.+.|+|.+.+..+-..++|.+.+|+..+-.|-
T Consensus 138 ~e~Ylt~~l~~~----~~~~t~~~~~f~e~s~~~f~~~~~~~h~-~g~v~~~~~~~~~~G~s~~w~~v~~s~~~~~~~~~ 212 (887)
T KOG1329|consen 138 LENYLTVVLHKA----RYRRTHVIYEFLENSRWSFSFDIGFAHK-AGYVIFRVKGARVPGWSKRWGRVKISFLQYCSGHR 212 (887)
T ss_pred ccchheeeechh----hhhchhhhhcccccchhhhhcccccccc-ccEEEEeecCCccccceeEEEEeccchhhhhcccc
Confidence 477999988752 34578888877 4999999887655544 3689999998876665678899999988887774
Q ss_pred --EEEEccCCCCCccCC-eEEEEEEEEEEc
Q 007473 572 --HAVPLFDRKGEELGS-ARLLMRFEFYEA 598 (602)
Q Consensus 572 --R~ipL~d~~g~~l~~-asL~v~i~~~e~ 598 (602)
.+.+..+.++++..+ +++.+++.+...
T Consensus 213 ~~~~~~Il~~d~~~~~~~~~~~~~~~~~~~ 242 (887)
T KOG1329|consen 213 IGGWFPILDNDGKPHQKGSNESLRLGFTPM 242 (887)
T ss_pred ccceeeeeccCCccccCCcccceEEeeEee
Confidence 467888888887644 555565666543
No 259
>cd08696 C2_Dock-C C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins. Dock-C is one of 4 classes of Dock family proteins. The members here include: Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3. Dock-C members are GEFs for both Rac and Cdc42. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-C members contain a functionally uncharacterized domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strand
Probab=55.56 E-value=47 Score=32.40 Aligned_cols=66 Identities=24% Similarity=0.307 Sum_probs=43.4
Q ss_pred cccccCCCCCCCCeeccEEEEEeecC--CccEEEEEEEecCCCCC------CCccEEEEEeCCC---ccCccEEEEc
Q 007473 511 MKSTKKKVDNWTPVWDDEFTFPLTIP--EMALLRVEVRKYSMPEK------DEFAGQTCLPVFQ---LRPGIHAVPL 576 (602)
Q Consensus 511 k~kTkvi~nn~nPvWNEtf~F~v~~p--ela~Lrf~V~D~d~~~~------dd~lGq~~lpL~~---L~~GyR~ipL 576 (602)
...|.+...+-+|.|+|++...+..+ +...|+|+.++-+...+ ...+|-+.+||-. |+.|-..+|.
T Consensus 55 ~~~S~V~yHnk~P~f~DEiKi~LP~~l~~~hHLlFtF~Hvs~~~k~~~~~~e~~~Gys~lPL~~~g~L~~g~~~LpV 131 (179)
T cd08696 55 EAYTAVTYHNKSPDFYDEIKIKLPADLTDNHHLLFTFYHISCQKKQEGGSVETPIGYTWLPLLRNGRLQSGEFNLPV 131 (179)
T ss_pred eEEEEEEEeCCCCcccceEEEEcCCCCCCCeEEEEEEEEeeccccccCCCccceEEEEEEeeecCCEEecCCEEEEE
Confidence 45677777889999999888876543 44679999988543221 2457777777642 4444444444
No 260
>cd08697 C2_Dock-D C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins. Dock-D is one of 4 classes of Dock family proteins. The members here include: Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Dock-D are Cdc42-specific GEFs. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-D members contain a functionally uncharacterized domain and a PH domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The PH domain broadly binds to phospholipids and is thought to be involved in targeting the plasma membrane. The C2 domain was first identified in PKC. C2 domains fold into an 8-stande
Probab=54.28 E-value=31 Score=33.82 Aligned_cols=67 Identities=19% Similarity=0.197 Sum_probs=44.9
Q ss_pred cccccCCCCCCCCeeccEEEEEeec--CCccEEEEEEEecCCC--C-------CCCccEEEEEeCCC----ccCccEEEE
Q 007473 511 MKSTKKKVDNWTPVWDDEFTFPLTI--PEMALLRVEVRKYSMP--E-------KDEFAGQTCLPVFQ----LRPGIHAVP 575 (602)
Q Consensus 511 k~kTkvi~nn~nPvWNEtf~F~v~~--pela~Lrf~V~D~d~~--~-------~dd~lGq~~lpL~~----L~~GyR~ip 575 (602)
...|.+...+-+|.|+|++...+.. .+...|+|+.+..+.. . ....+|-+.+||-. |..|...+|
T Consensus 57 ~~~s~V~yh~k~P~f~dEiKI~LP~~l~~~hHLlFtFyHvsc~~~~k~~~~~~~e~~~Gys~lPLl~~~~~l~~g~~~Lp 136 (185)
T cd08697 57 SAYAAVLHHNQNPEFYDEIKIELPTQLHEKHHLLFTFYHVSCDINKKGKKKDGVETPVGYAWLPLLKDKGRLNSEEQTPP 136 (185)
T ss_pred EEEEEEEEcCCCCccceeEEEecCCcCCCCeeEEEEEEeeccccccccccCCCccceEEEEEEeeecCCCEEecCCEeee
Confidence 4567777788999999988877653 3346799999986521 1 12457777777755 555655555
Q ss_pred cc
Q 007473 576 LF 577 (602)
Q Consensus 576 L~ 577 (602)
..
T Consensus 137 V~ 138 (185)
T cd08697 137 VA 138 (185)
T ss_pred EE
Confidence 43
No 261
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=51.98 E-value=18 Score=24.16 Aligned_cols=27 Identities=22% Similarity=0.406 Sum_probs=22.2
Q ss_pred hHHHHHHHhhCC-CCccCHHHHHHHHHH
Q 007473 27 DVKEMFKKYAEG-GTHMTAEQLWQFLVE 53 (602)
Q Consensus 27 el~~if~~~~~~-~~~l~~~~~~~Fl~~ 53 (602)
|+..+|..|-.+ ...|+.++|+.+|++
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 578899999655 589999999999973
No 262
>PTZ00184 calmodulin; Provisional
Probab=50.66 E-value=61 Score=29.04 Aligned_cols=64 Identities=16% Similarity=0.348 Sum_probs=45.5
Q ss_pred hhHHHHHHHhhC-CCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 26 ADVKEMFKKYAE-GGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 26 ~el~~if~~~~~-~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
+++...|..+-. +...++.++|..+|... +.. .+.+.+..++..+... ..+.++++.|..+|..
T Consensus 11 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~-~~~-~~~~~~~~~~~~~d~~-------~~g~i~~~ef~~~l~~ 75 (149)
T PTZ00184 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQN-PTEAELQDMINEVDAD-------GNGTIDFPEFLTLMAR 75 (149)
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-CCC-CCHHHHHHHHHhcCcC-------CCCcCcHHHHHHHHHH
Confidence 456777877744 35889999999999754 332 4566777887776521 2357999999998863
No 263
>PF11422 IBP39: Initiator binding protein 39 kDa; InterPro: IPR024238 Initiator binding protein 39kDa (IBP39) recognises the initiator (Inr), which in Trichomonas vaginalis is solely responsible for transcription start site selection. IBP39 consists of an N-terminal Inr binding domain, a flexible linker, and a C-terminal domain. The C-terminal domain interacts with the RNAP II large subunit C-terminal domain. Binding of IBP39 to Inr recruits RNAP II and initiates transcription []. This entry represents the C-terminal domain.; PDB: 1Q88_A 1Q87_B 1Q89_A.
Probab=47.71 E-value=83 Score=30.56 Aligned_cols=100 Identities=15% Similarity=0.235 Sum_probs=65.4
Q ss_pred chhHHHHHHHhhCCCC--ccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC--CC
Q 007473 25 PADVKEMFKKYAEGGT--HMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS--TD 100 (602)
Q Consensus 25 r~el~~if~~~~~~~~--~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S--~~ 100 (602)
|.++..+|.++.+... .++++.|.+-+.+.=+....+.+.|.++|...... .....+|+.+|..||.- ++
T Consensus 18 k~~vi~~W~eiv~~~~i~av~~~~Fi~~aa~~f~q~~q~~~Na~~~I~~il~~------k~~~~iT~~Df~~F~A~FGP~ 91 (181)
T PF11422_consen 18 KRNVISIWEEIVQNHGIFAVSLDFFIKKAANRFKQPSQSLKNAIQVIQYILTP------KNTNVITIPDFYKFLARFGPE 91 (181)
T ss_dssp HHHHHHHHHHHHSSSS--EEEHHHHHHHHHHHHS-TTS-HHHHHHHHHHHS--------SS-SEEEHHHHHHHHHHSSSG
T ss_pred HHHHHHHHHHHhcCCCcceeeHHHHHHHHHHHhccccccccchHHHHHHHHcC------CCCceeeHHHHHHHHHHhCCc
Confidence 5678999999988654 78888888877655333345678888888876521 12357899999988742 11
Q ss_pred CC----------------CCC-CCC-CCcCCCCcccccccccCCcccc
Q 007473 101 LN----------------PPL-GNQ-VYQDMTAPLSHYFIYTGHNSYL 130 (602)
Q Consensus 101 ~n----------------~~~-~~~-v~qdM~~PLs~YfI~SSHNTYL 130 (602)
.+ ..+ +.+ ..+-|+.+++-||=+.=||=..
T Consensus 92 ~tim~KI~~lL~~s~~~~~wl~~~Pd~~~~~~~~i~g~f~~t~~NC~i 139 (181)
T PF11422_consen 92 ETIMEKIHSLLCSSNNDGQWLYFDPDAEKNFDNSISGYFDNTEPNCFI 139 (181)
T ss_dssp GGHHHHHHHHHHHHHTTTS-B-SSSSTTTTTCCS-EEEEESSSTTEEE
T ss_pred hhHHHHHHHHHHhhccCCcceeeCchhhcccCcccceeeccCCCceEE
Confidence 11 111 233 5678899999999988887544
No 264
>PF11618 DUF3250: Protein of unknown function (DUF3250); InterPro: IPR021656 This family of proteins represents a protein with unknown function. It may be the C2 domain from KIAA1005 however this cannot be confirmed. ; PDB: 2YRB_A.
Probab=45.63 E-value=74 Score=28.32 Aligned_cols=81 Identities=16% Similarity=0.173 Sum_probs=46.6
Q ss_pred ccccCCCCCCCCeeccEEEEEeecCCc-------cEEEEEEEecCCCCCCCccEEEEEeCCCcc--Cc---cEEEEccCC
Q 007473 512 KSTKKKVDNWTPVWDDEFTFPLTIPEM-------ALLRVEVRKYSMPEKDEFAGQTCLPVFQLR--PG---IHAVPLFDR 579 (602)
Q Consensus 512 ~kTkvi~nn~nPvWNEtf~F~v~~pel-------a~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~--~G---yR~ipL~d~ 579 (602)
..|.++. +.+|.+|-+-.|.|...++ ..+++.++..- ...-..+|.+.+++..+- .| +-.+.|.+.
T Consensus 13 q~Tpvv~-G~~p~y~fts~y~V~~d~~fl~YLq~~~~~lELhqa~-g~d~~tla~~~i~l~~ll~~~~~~i~~~~~l~g~ 90 (107)
T PF11618_consen 13 QTTPVVR-GLNPFYDFTSQYKVTMDDLFLHYLQTGSLTLELHQAL-GSDFETLAAGQISLRPLLESNGERIHGSATLVGV 90 (107)
T ss_dssp EE---EE-SSS----EEEEEEE--SHHHHHHHHH--EEEEEEEE--SS-EEEEEEEEE--SHHHH--S--EEEEEEE-BS
T ss_pred eccccee-CCCccceeEEEEEEEcCHHHHHHhhcCCEEEEEEeec-cCCeEEEEEEEeechhhhcCCCceEEEEEEEecc
Confidence 3455554 8999999999999986653 46888888754 333678999999999874 33 456788888
Q ss_pred CCCccCCeEEEEEEEEE
Q 007473 580 KGEELGSARLLMRFEFY 596 (602)
Q Consensus 580 ~g~~l~~asL~v~i~~~ 596 (602)
+|+ ..++|-..+++.
T Consensus 91 ~~~--~~g~l~y~~rl~ 105 (107)
T PF11618_consen 91 SGE--DFGTLEYWIRLR 105 (107)
T ss_dssp SS---TSEEEEEEEEEE
T ss_pred CCC--eEEEEEEEEEec
Confidence 888 457777666554
No 265
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=45.01 E-value=76 Score=29.45 Aligned_cols=65 Identities=15% Similarity=0.333 Sum_probs=49.8
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
..||...|+-|-.+ ..++|+++|+.+|...= + ..+.+.+..+|...-.. ..+.+++++|...+..
T Consensus 84 ~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg-~-~~~~~e~~~mi~~~d~d-------~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 84 SEELKEAFRVFDKDGDGFISASELKKVLTSLG-E-KLTDEECKEMIREVDVD-------GDGKVNFEEFVKMMSG 149 (151)
T ss_pred HHHHHHHHHHHccCCCCcCcHHHHHHHHHHhC-C-cCCHHHHHHHHHhcCCC-------CCCeEeHHHHHHHHhc
Confidence 45899999999755 58899999999999754 3 36788888888875421 2456789999988763
No 266
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=44.91 E-value=67 Score=30.79 Aligned_cols=67 Identities=16% Similarity=0.319 Sum_probs=52.9
Q ss_pred CCchhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 23 GPPADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 23 ~~r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.+|.||..-|+-|=.+ ..+++..+|+.-|.. =++ ..+.+++..++..+... +.+.++.+.|...++.
T Consensus 89 ~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~-lge-~~~deev~~ll~~~d~d-------~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 89 DKEEELREAFKLFDKDHDGYISIGELRRVLKS-LGE-RLSDEEVEKLLKEYDED-------GDGEIDYEEFKKLIKD 156 (160)
T ss_pred CcHHHHHHHHHHhCCCCCceecHHHHHHHHHh-hcc-cCCHHHHHHHHHhcCCC-------CCceEeHHHHHHHHhc
Confidence 4578999999999654 589999999999984 334 46888999999987632 3468999999987764
No 267
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=43.38 E-value=37 Score=20.41 Aligned_cols=27 Identities=19% Similarity=0.410 Sum_probs=21.4
Q ss_pred hHHHHHHHhhCC-CCccCHHHHHHHHHH
Q 007473 27 DVKEMFKKYAEG-GTHMTAEQLWQFLVE 53 (602)
Q Consensus 27 el~~if~~~~~~-~~~l~~~~~~~Fl~~ 53 (602)
|+..+|..+-.+ ...++.++|..++..
T Consensus 1 ~~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 1 ELKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred CHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 467889888655 478999999998864
No 268
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=42.15 E-value=51 Score=25.45 Aligned_cols=47 Identities=17% Similarity=0.237 Sum_probs=33.2
Q ss_pred ccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHh
Q 007473 41 HMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYL 96 (602)
Q Consensus 41 ~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L 96 (602)
.|+..++++||+...=+ ++++.|..|+++.... +.+.|..++|..|.
T Consensus 1 kmsf~Evk~lLk~~NI~--~~~~yA~~LFq~~D~s-------~~g~Le~~Ef~~Fy 47 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIE--MDDEYARQLFQECDKS-------QSGRLEGEEFEEFY 47 (51)
T ss_dssp EBEHHHHHHHHHHTT------HHHHHHHHHHH-SS-------SSSEBEHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccC--cCHHHHHHHHHHhccc-------CCCCccHHHHHHHH
Confidence 37889999999976533 6788999999886522 34678888888774
No 269
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed
Probab=41.73 E-value=76 Score=33.13 Aligned_cols=79 Identities=22% Similarity=0.285 Sum_probs=51.7
Q ss_pred CCccCCCCChHHHHHHHhc----C-CcEEEEEeecCCCCCCceEeec-ccc-cccchHHHHHHHHhhcccccCCCceEEE
Q 007473 132 GNQFSSDCSDVPITKALKR----G-VRVIELDLWPNSAKDDVLVLHG-RTL-TTPVELIKCLRAIKENAFSASPYPVILT 204 (602)
Q Consensus 132 g~Ql~g~Ss~e~Y~~aL~~----G-CRcvElD~WdG~~~~~piv~HG-~Tl-ts~i~f~dvi~aI~~~AF~~S~yPvILS 204 (602)
+=|+.| ++.+.|.++..+ | +..|||-|.- | ..-|| ..+ ...=...+++++|++.. ++||++-
T Consensus 95 i~si~g-~~~~~~~~~a~~~~~aG~~D~iElN~~c-P-----~~~~gg~~~~~~~~~~~eiv~~vr~~~----~~pv~vK 163 (301)
T PRK07259 95 IANVAG-STEEEYAEVAEKLSKAPNVDAIELNISC-P-----NVKHGGMAFGTDPELAYEVVKAVKEVV----KVPVIVK 163 (301)
T ss_pred EEEecc-CCHHHHHHHHHHHhccCCcCEEEEECCC-C-----CCCCCccccccCHHHHHHHHHHHHHhc----CCCEEEE
Confidence 346655 468888877654 8 9999999863 2 12353 222 23346789999999864 7999987
Q ss_pred ecCCCCHHHHHHHHHHHHH
Q 007473 205 FEDHLNPHLQAKVAQMITQ 223 (602)
Q Consensus 205 lE~Hcs~~qQ~~ma~~l~~ 223 (602)
|-. +.+.-..+|+.+.+
T Consensus 164 l~~--~~~~~~~~a~~l~~ 180 (301)
T PRK07259 164 LTP--NVTDIVEIAKAAEE 180 (301)
T ss_pred cCC--CchhHHHHHHHHHH
Confidence 753 33455566776655
No 270
>PRK09071 hypothetical protein; Validated
Probab=41.30 E-value=21 Score=38.14 Aligned_cols=60 Identities=15% Similarity=0.229 Sum_probs=38.8
Q ss_pred cCCccCCCCCh--HHHHHHHhcCCcEE----EEE--eecCCCC---------------CCceEeecc-cccccc-hHHHH
Q 007473 131 IGNQFSSDCSD--VPITKALKRGVRVI----ELD--LWPNSAK---------------DDVLVLHGR-TLTTPV-ELIKC 185 (602)
Q Consensus 131 ~g~Ql~g~Ss~--e~Y~~aL~~GCRcv----ElD--~WdG~~~---------------~~piv~HG~-Tlts~i-~f~dv 185 (602)
++-.++|++-- .++.+|++.-|.-+ .|| |++|.++ +-||+-||. ..||+- .-.||
T Consensus 48 ~alr~kgeT~eEi~g~~~a~r~~~~~~~~~~~iD~~~gtG~d~~~~~~~~~a~vlA~~G~~V~kHGnr~~ssk~g~saDv 127 (323)
T PRK09071 48 MLLRVKEETAEELAGFVEAIRERLQAPPLAVDLDWPSYAGKRRHLPWYLLAAKLLAQNGYRVLLHGGGGHTAGRLYTEQL 127 (323)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhcccCCCCCceecCCcCCCCCCcccHHHHHHHHHHCCCeEEEECCCCCCCCcccHHHH
Confidence 33344555543 36788888665433 366 7888763 458999997 456664 47888
Q ss_pred HHHHh
Q 007473 186 LRAIK 190 (602)
Q Consensus 186 i~aI~ 190 (602)
++++.
T Consensus 128 LeaLG 132 (323)
T PRK09071 128 LEALG 132 (323)
T ss_pred HHHCC
Confidence 88763
No 271
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=39.92 E-value=1e+02 Score=29.50 Aligned_cols=63 Identities=10% Similarity=0.231 Sum_probs=46.0
Q ss_pred chhHHHH---HHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEM---FKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~i---f~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
+.+|.++ |..+..+ +..|+.++|...|+.-+.. .+.+.+..|++.+-. +...|++..|+..|-
T Consensus 16 ~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~--~s~~ei~~l~~~~d~--------~~~~idf~~Fl~~ms 82 (160)
T COG5126 16 EEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFN--PSEAEINKLFEEIDA--------GNETVDFPEFLTVMS 82 (160)
T ss_pred HHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCC--CcHHHHHHHHHhccC--------CCCccCHHHHHHHHH
Confidence 4455555 5555443 5899999999999966644 678888888887541 346899999998884
No 272
>PF15625 CC2D2AN-C2: CC2D2A N-terminal C2 domain
Probab=39.80 E-value=82 Score=30.17 Aligned_cols=67 Identities=18% Similarity=0.367 Sum_probs=47.2
Q ss_pred CceEEEEEecCCCCcccccccCC--CCCCCCeeccEEEEEee-cCCccEEEEEEEecCCCCCCCccEEEEEeCCCcc
Q 007473 495 QFYTRVGIAGVPADKKMKSTKKK--VDNWTPVWDDEFTFPLT-IPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLR 568 (602)
Q Consensus 495 DpyV~V~i~G~p~d~~k~kTkvi--~nn~nPvWNEtf~F~v~-~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~ 568 (602)
..||+|.+.+ +.-.+|+.. ..+|.-.+|+.|.+.+. .|+ .|.+.||.... ..+.+|+++.+|+-...
T Consensus 38 ~~~ikl~~N~----k~V~~T~~~~l~~dF~v~f~~~f~v~i~~~Pe--si~l~i~E~~~-~~~~~la~v~vpvP~~~ 107 (168)
T PF15625_consen 38 RYYIKLFFND----KEVSRTRSRPLWSDFRVHFNEIFNVQITRWPE--SIKLEIYEKSG-LSDRLLAEVFVPVPGST 107 (168)
T ss_pred eEEEEEEECC----EEEEeeeeEecCCCeEEeccCEEEEEEecCCC--EEEEEEEEccC-ccceEEEEEEeeCCCCc
Confidence 4588888765 223355443 34466778999999875 454 68899998776 55889999999976543
No 273
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=39.67 E-value=18 Score=29.72 Aligned_cols=33 Identities=30% Similarity=0.380 Sum_probs=27.3
Q ss_pred CCchhHHHHHHHhhCCCCccCHHHHHHHHHHHh
Q 007473 23 GPPADVKEMFKKYAEGGTHMTAEQLWQFLVEVQ 55 (602)
Q Consensus 23 ~~r~el~~if~~~~~~~~~l~~~~~~~Fl~~~Q 55 (602)
.+.++|..-|+.++++++++|.++|++-|.-+|
T Consensus 3 ~s~eqv~~aFr~lA~~KpyVT~~dLr~~l~pe~ 35 (69)
T PF08726_consen 3 DSAEQVEEAFRALAGGKPYVTEEDLRRSLTPEQ 35 (69)
T ss_dssp STCHHHHHHHHHHCTSSSCEEHHHHHHHS-CCC
T ss_pred CCHHHHHHHHHHHHcCCCcccHHHHHHHcCcHH
Confidence 356789999999999999999999999876433
No 274
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=38.56 E-value=1.1e+02 Score=28.29 Aligned_cols=64 Identities=14% Similarity=0.291 Sum_probs=51.3
Q ss_pred hhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcC
Q 007473 26 ADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFS 98 (602)
Q Consensus 26 ~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S 98 (602)
.++..+|..+-.+ ...++..+|...|+.-... .+.++...++.++... +.+.++++.|...|..
T Consensus 8 ~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~--~t~~el~~~~~~~D~d-------g~g~I~~~eF~~l~~~ 72 (151)
T KOG0027|consen 8 LELKEAFQLFDKDGDGKISVEELGAVLRSLGQN--PTEEELRDLIKEIDLD-------GDGTIDFEEFLDLMEK 72 (151)
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCC--CCHHHHHHHHHHhCCC-------CCCeEcHHHHHHHHHh
Confidence 5788899998544 5899999999999976654 5788899999987632 3467999999999874
No 275
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively. DHPD catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines. DHPD contains two FAD, two FMN and eight [4Fe-4S] clusters, arranged in two electron transfer chains that pass its homodimeric interface twice. Two of
Probab=33.22 E-value=1.7e+02 Score=30.17 Aligned_cols=90 Identities=17% Similarity=0.209 Sum_probs=57.3
Q ss_pred cCCccCCCCChHHHHHHH----hcCCcEEEEEeecCCCCCCceEeeccc-ccccchHHHHHHHHhhcccccCCCceEEEe
Q 007473 131 IGNQFSSDCSDVPITKAL----KRGVRVIELDLWPNSAKDDVLVLHGRT-LTTPVELIKCLRAIKENAFSASPYPVILTF 205 (602)
Q Consensus 131 ~g~Ql~g~Ss~e~Y~~aL----~~GCRcvElD~WdG~~~~~piv~HG~T-lts~i~f~dvi~aI~~~AF~~S~yPvILSl 205 (602)
++=|+.|. +.+.|.++. ..|+..|||.|-- +. .-.|.. +...=..++++++|++.. +.||++=|
T Consensus 101 vi~si~g~-~~~~~~~~a~~~~~~G~d~ielN~~c-P~-----~~~~~~~~~~~~~~~eiv~~vr~~~----~~pv~vKl 169 (289)
T cd02810 101 LIASVGGS-SKEDYVELARKIERAGAKALELNLSC-PN-----VGGGRQLGQDPEAVANLLKAVKAAV----DIPLLVKL 169 (289)
T ss_pred EEEEeccC-CHHHHHHHHHHHHHhCCCEEEEEcCC-CC-----CCCCcccccCHHHHHHHHHHHHHcc----CCCEEEEe
Confidence 44566663 555554333 4599999999864 11 112333 233345688999999754 79999988
Q ss_pred cCCCCHHHHHHHHHHHHHHhhcccCC
Q 007473 206 EDHLNPHLQAKVAQMITQTFGAMLYS 231 (602)
Q Consensus 206 E~Hcs~~qQ~~ma~~l~~~~Gd~L~~ 231 (602)
-..-+.+.=..+|+.+.+.=-|.|..
T Consensus 170 ~~~~~~~~~~~~a~~l~~~Gad~i~~ 195 (289)
T cd02810 170 SPYFDLEDIVELAKAAERAGADGLTA 195 (289)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 87777767777788776642244443
No 276
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=32.39 E-value=1.8e+02 Score=26.26 Aligned_cols=60 Identities=8% Similarity=0.109 Sum_probs=42.8
Q ss_pred chhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 25 PADVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 25 r~el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
+.+|...|..+=.+ +..|+.++|..+. . . .....+..+++.+-.. +.+.||+++|...|.
T Consensus 47 ~~~l~w~F~~lD~d~DG~Ls~~EL~~~~---l-~--~~e~~~~~f~~~~D~n-------~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 47 KDPVGWMFNQLDGNYDGKLSHHELAPIR---L-D--PNEHCIKPFFESCDLD-------KDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHH---c-c--chHHHHHHHHHHHCCC-------CCCCCCHHHHHHHHh
Confidence 45678889998655 5889999999987 1 1 1234456677766421 356899999999995
No 277
>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A.
Probab=31.51 E-value=39 Score=26.36 Aligned_cols=29 Identities=28% Similarity=0.267 Sum_probs=21.8
Q ss_pred cCCcccccCCccCCCCChHHHHHHHhcCCcEEE
Q 007473 124 TGHNSYLIGNQFSSDCSDVPITKALKRGVRVIE 156 (602)
Q Consensus 124 SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvE 156 (602)
++++|+|.. +....+-|..|...|+.+|-
T Consensus 32 t~~~THLI~----~~~~~~K~~~A~~~gi~vV~ 60 (63)
T PF12738_consen 32 TKKTTHLIC----SSPEGKKYRKAKEWGIPVVS 60 (63)
T ss_dssp STT-SEEEE----ES--HHHHHHHHHCTSEEEE
T ss_pred cCCceEEEE----eCCCcHHHHHHHHCCCcEEC
Confidence 448999987 55667899999999998874
No 278
>PTZ00466 actin-like protein; Provisional
Probab=28.74 E-value=64 Score=35.07 Aligned_cols=45 Identities=20% Similarity=0.251 Sum_probs=38.3
Q ss_pred HHHHHHHhhcccc-----cCCCceEEEecCCCCHHHHHHHHHHHHHHhhc
Q 007473 183 IKCLRAIKENAFS-----ASPYPVILTFEDHLNPHLQAKVAQMITQTFGA 227 (602)
Q Consensus 183 ~dvi~aI~~~AF~-----~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd 227 (602)
.|.++.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||-
T Consensus 86 wd~~e~iw~~~f~~l~v~~~~~pvllte~~~~~~~~re~~~e~lFE~~~~ 135 (380)
T PTZ00466 86 WNDMENIWIHVYNSMKINSEEHPVLLTEAPLNPQKNKEKIAEVFFETFNV 135 (380)
T ss_pred HHHHHHHHHHHHhhcccCCccCeEEEecCccccHHHHHHHHHHHhccCCC
Confidence 5778888888873 36899999977888999999999999999985
No 279
>PTZ00452 actin; Provisional
Probab=28.22 E-value=66 Score=34.92 Aligned_cols=45 Identities=20% Similarity=0.259 Sum_probs=37.9
Q ss_pred HHHHHHHhhcccc------cCCCceEEEecCCCCHHHHHHHHHHHHHHhhc
Q 007473 183 IKCLRAIKENAFS------ASPYPVILTFEDHLNPHLQAKVAQMITQTFGA 227 (602)
Q Consensus 183 ~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd 227 (602)
.|.++.|=+|+|. .+++||+++=-..++..++++||++|=|.|+-
T Consensus 79 wd~~e~iw~~~f~~~l~v~p~~~pvlitE~~~~~~~~Re~l~eilFE~~~v 129 (375)
T PTZ00452 79 WDDIEIIWHHAFYNELCMSPEDQPVFMTDAPMNSKFNRERMTQIMFETFNT 129 (375)
T ss_pred HHHHHHHHHHHHHhhcCCCcccCceeeecCCCCCHHHHHHHHHHHhhccCC
Confidence 6778888888874 25899999955777899999999999999996
No 280
>PLN02591 tryptophan synthase
Probab=27.80 E-value=44 Score=34.34 Aligned_cols=94 Identities=24% Similarity=0.251 Sum_probs=55.4
Q ss_pred CCCChHHH---HHHH-hcCCcEEEEEeec-CCCCCCceEee--cccccccchHHHHHHHHhhcccccCCCceEEEecCCC
Q 007473 137 SDCSDVPI---TKAL-KRGVRVIELDLWP-NSAKDDVLVLH--GRTLTTPVELIKCLRAIKENAFSASPYPVILTFEDHL 209 (602)
Q Consensus 137 g~Ss~e~Y---~~aL-~~GCRcvElD~Wd-G~~~~~piv~H--G~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hc 209 (602)
|.-+.|.. +++| ..||-.|||.+== -|--+.|+|-. -..|..-++++++++.+++.. ...+-|+||. --.
T Consensus 11 G~P~~e~~~~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~~~~~r-~~~~~p~ilm--~Y~ 87 (250)
T PLN02591 11 GDPDLDTTAEALRLLDACGADVIELGVPYSDPLADGPVIQAAATRALEKGTTLDSVISMLKEVA-PQLSCPIVLF--TYY 87 (250)
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCCCHHHHHHHHHHHh-cCCCCCEEEE--ecc
Confidence 44455443 4444 5799999998731 12223466654 346778889999999999977 3467797643 233
Q ss_pred CHHHH---HHHHHHHHHHhhcccCCCC
Q 007473 210 NPHLQ---AKVAQMITQTFGAMLYSPE 233 (602)
Q Consensus 210 s~~qQ---~~ma~~l~~~~Gd~L~~~~ 233 (602)
++-.| ++..+-+++.=-|-|+.|+
T Consensus 88 N~i~~~G~~~F~~~~~~aGv~GviipD 114 (250)
T PLN02591 88 NPILKRGIDKFMATIKEAGVHGLVVPD 114 (250)
T ss_pred cHHHHhHHHHHHHHHHHcCCCEEEeCC
Confidence 44344 3444445554334455543
No 281
>PRK05395 3-dehydroquinate dehydratase; Provisional
Probab=27.72 E-value=60 Score=30.62 Aligned_cols=66 Identities=24% Similarity=0.358 Sum_probs=44.8
Q ss_pred cCCCCChHHHHHHHhcCCc--EEEEEeecCC-------------CCCCceEeeccccc-ccchHHHHHHHHhhcccccCC
Q 007473 135 FSSDCSDVPITKALKRGVR--VIELDLWPNS-------------AKDDVLVLHGRTLT-TPVELIKCLRAIKENAFSASP 198 (602)
Q Consensus 135 l~g~Ss~e~Y~~aL~~GCR--cvElD~WdG~-------------~~~~piv~HG~Tlt-s~i~f~dvi~aI~~~AF~~S~ 198 (602)
+.|.-+.+.+.+.|+.-|. -++++|.-.. ++-..||.--..+| ++|.++|++.++ .
T Consensus 22 iYG~~tl~~i~~~~~~~a~~~g~~v~~~QSN~EGelId~I~~a~~~~dgiiINpga~THtSiAl~DAl~~~--------~ 93 (146)
T PRK05395 22 IYGSTTLADIEALLEEEAAELGVELEFFQSNHEGELIDRIHEARDGADGIIINPGAYTHTSVALRDALAAV--------S 93 (146)
T ss_pred cCCCCCHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHhcccCCcEEEECchHHHHHHHHHHHHHHcC--------C
Confidence 5688889998888877555 5688885211 01123454444555 889999999887 5
Q ss_pred CceEEEecCCCCH
Q 007473 199 YPVILTFEDHLNP 211 (602)
Q Consensus 199 yPvILSlE~Hcs~ 211 (602)
.|+ +|+|.|.
T Consensus 94 ~P~---VEVHiSN 103 (146)
T PRK05395 94 IPV---IEVHLSN 103 (146)
T ss_pred CCE---EEEecCC
Confidence 665 5999874
No 282
>PF11478 Tachystatin_B: Antimicrobial chitin binding protein tachystatin B; InterPro: IPR020957 Tachystatin B is an antimicrobial chitin binding peptide and consists of two isotopes B1 and B2. Both structures contain a short antiparallel beta sheet with an inhibitory cysteine knot motif. Tyr(14) and Arg(17) are thought to be the essential residues for chitin binding []. ; PDB: 2DCW_A 2DCV_A.
Probab=27.29 E-value=22 Score=25.10 Aligned_cols=16 Identities=25% Similarity=0.426 Sum_probs=6.4
Q ss_pred HHHHHhcCCcEEEEEeecC
Q 007473 144 ITKALKRGVRVIELDLWPN 162 (602)
Q Consensus 144 Y~~aL~~GCRcvElD~WdG 162 (602)
||.+|-+|+||- ++.|
T Consensus 1 yitclfrgarcr---vysg 16 (42)
T PF11478_consen 1 YITCLFRGARCR---VYSG 16 (42)
T ss_dssp ----B-TT-EEE---TT-S
T ss_pred CeEEEeccceEE---EecC
Confidence 788899999984 4544
No 283
>PTZ00281 actin; Provisional
Probab=26.57 E-value=66 Score=34.86 Aligned_cols=45 Identities=22% Similarity=0.253 Sum_probs=38.2
Q ss_pred HHHHHHHhhcccc------cCCCceEEEecCCCCHHHHHHHHHHHHHHhhc
Q 007473 183 IKCLRAIKENAFS------ASPYPVILTFEDHLNPHLQAKVAQMITQTFGA 227 (602)
Q Consensus 183 ~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd 227 (602)
.|.++.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||-
T Consensus 80 wd~~e~l~~~~f~~~l~v~p~~~pvllte~~~~~~~~re~l~e~lFE~~~v 130 (376)
T PTZ00281 80 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130 (376)
T ss_pred HHHHHHHHHHHHHhhccCCCccCeEEEecCCCCcHHHHHHHHHHHhcccCC
Confidence 5777778788873 36899999977788999999999999999995
No 284
>KOG1452 consensus Predicted Rho GTPase-activating protein [Signal transduction mechanisms]
Probab=25.72 E-value=1.7e+02 Score=31.11 Aligned_cols=81 Identities=16% Similarity=0.212 Sum_probs=48.9
Q ss_pred ceeEEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCCccEEEEEE
Q 007473 466 KKTLKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPEMALLRVEV 545 (602)
Q Consensus 466 ~~~L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pela~Lrf~V 545 (602)
.+.|-+.++.|.||....+ ..+...+.|+.++..- ..+.||.+.....-=.|.|+|+.++...+ .+.+.|
T Consensus 50 tGiL~~H~~~GRGLr~~p~----~kglt~~~ycVle~dr----qh~aRt~vrs~~~~f~w~e~F~~Dvv~~~--vl~~lv 119 (442)
T KOG1452|consen 50 TGILYFHAYNGRGLRMTPQ----QKGLTVCFYCVLEPDR----QHPARTRVRSSGPGFAWAEDFKHDVVNIE--VLHYLV 119 (442)
T ss_pred cceEEEEEecccccccChh----ccCceeeeeeeeeecc----cCccccccccCCCCccchhhceeecccce--eeeEEE
Confidence 4568889999999865321 1223356676555431 22334554433334468999998876543 577888
Q ss_pred EecCCCCCCCc
Q 007473 546 RKYSMPEKDEF 556 (602)
Q Consensus 546 ~D~d~~~~dd~ 556 (602)
|.++...+..+
T Consensus 120 ySW~pq~RHKL 130 (442)
T KOG1452|consen 120 YSWPPQRRHKL 130 (442)
T ss_pred eecCchhhccc
Confidence 88875544443
No 285
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=24.51 E-value=2.7e+02 Score=27.33 Aligned_cols=69 Identities=22% Similarity=0.301 Sum_probs=48.1
Q ss_pred hHHHHHHHhhCCC-CccCHHHHHHHHHHHhCCCCCC--HHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCC
Q 007473 27 DVKEMFKKYAEGG-THMTAEQLWQFLVEVQGHGGVS--IEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFST 99 (602)
Q Consensus 27 el~~if~~~~~~~-~~l~~~~~~~Fl~~~Q~~~~~~--~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~ 99 (602)
-++..|+-|-.++ ..|+.++|...++.-=++. .+ .+...+|+++.-.+.. .-..+.+++++|.+++.+.
T Consensus 105 Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~-~~~~~e~~~~i~d~t~~e~D---~d~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 105 KLRFAFRVYDLDGDGFISREELKQILRMMVGEN-DDMSDEQLEDIVDKTFEEAD---TDGDGKISFEEFCKVVEKQ 176 (187)
T ss_pred HHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccC-CcchHHHHHHHHHHHHHHhC---CCCCCcCcHHHHHHHHHcC
Confidence 3677899997654 6799999999888665543 23 5666777766543211 1135789999999999863
No 286
>PRK08136 glycosyl transferase family protein; Provisional
Probab=24.44 E-value=73 Score=33.93 Aligned_cols=25 Identities=20% Similarity=0.215 Sum_probs=20.5
Q ss_pred CCceEeecc-cccccchHHHHHHHHh
Q 007473 166 DDVLVLHGR-TLTTPVELIKCLRAIK 190 (602)
Q Consensus 166 ~~piv~HG~-Tlts~i~f~dvi~aI~ 190 (602)
+-||+-||. ..+|++.-.||+++..
T Consensus 109 G~~V~kHGnr~vssk~gsadvleaLG 134 (317)
T PRK08136 109 GVPVLVHGVSEDPTRVTSAEIFEALG 134 (317)
T ss_pred CCeEEEECCCCCCCcccHHHHHHHcC
Confidence 458999996 6778888899998864
No 287
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton. These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....
Probab=24.17 E-value=80 Score=34.00 Aligned_cols=45 Identities=29% Similarity=0.380 Sum_probs=35.1
Q ss_pred HHHHHHHhhcccc------cCCCceEEEecCCCCHHHHHHHHHHHHHHhhc
Q 007473 183 IKCLRAIKENAFS------ASPYPVILTFEDHLNPHLQAKVAQMITQTFGA 227 (602)
Q Consensus 183 ~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd 227 (602)
.|.++.|=+|+|. .+++||||+.-.+++..++++|+++|-|.||-
T Consensus 73 ~~~~e~i~~~~~~~~l~~~~~~~~vll~~~~~~~~~~r~~l~e~lfE~~~~ 123 (393)
T PF00022_consen 73 WDALEEIWDYIFSNLLKVDPSDHPVLLTEPPFNPRSQREKLAEILFEKFGV 123 (393)
T ss_dssp HHHHHHHHHHHHHTTT-SSGGGSEEEEEESTT--HHHHHHHHHHHHHTS--
T ss_pred ccccccccccccccccccccccceeeeeccccCCchhhhhhhhhhhccccc
Confidence 4667777777764 57899999999999999999999999999985
No 288
>cd08687 C2_PKN-like C2 domain in Protein kinase C-like (PKN) proteins. PKN is a lipid-activated serine/threonine kinase. It is a member of the protein kinase C (PKC) superfamily, but lacks a C1 domain. There are at least 3 different isoforms of PKN (PRK1/PKNalpha/PAK1; PKNbeta, and PRK2/PAK2/PKNgamma). The C-terminal region contains the Ser/Thr type protein kinase domain, while the N-terminal region of PKN contains three antiparallel coiled-coil (ACC) finger domains which are relatively rich in charged residues and contain a leucine zipper-like sequence. These domains binds to the small GTPase RhoA. Following these domains is a C2-like domain. Its C-terminal part functions as an auto-inhibitory region. PKNs are not activated by classical PKC activators such as diacylglycerol, phorbol ester or Ca2+, but instead are activated by phospholipids and unsaturated fatty acids. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 struct
Probab=23.90 E-value=2.4e+02 Score=24.67 Aligned_cols=62 Identities=18% Similarity=0.237 Sum_probs=40.9
Q ss_pred CCCeeccEEEEEeecCCccEEEEEEEecCCCCCCCccEEEEEeCCCccCccEEEEccCCCCCccCCeEEEEEEEE
Q 007473 521 WTPVWDDEFTFPLTIPEMALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPLFDRKGEELGSARLLMRFEF 595 (602)
Q Consensus 521 ~nPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL~d~~g~~l~~asL~v~i~~ 595 (602)
.+..|+++|++++... .-|.+.|+-.|. ..+.|-..+.|...+.|+++ +|. +.+.||+.+.|
T Consensus 31 s~q~WDQ~Fti~LdRs--RELEI~VywrD~---RslCav~~lrLEd~~~~~~~-~le-------pqg~l~~ev~f 92 (98)
T cd08687 31 SNQAWDQSFTLELERS--RELEIAVYWRDW---RSLCAVKFLKLEDERHEVQL-DME-------PQLCLVAELTF 92 (98)
T ss_pred ccccccceeEEEeecc--cEEEEEEEEecc---hhhhhheeeEhhhhccccee-ccc-------cccEEEEEEEe
Confidence 4678999999998642 358889988774 45777777888774443332 221 33567777665
No 289
>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional
Probab=23.55 E-value=63 Score=36.95 Aligned_cols=62 Identities=15% Similarity=0.238 Sum_probs=39.8
Q ss_pred cccCCccCCCCChH--HHHHHHhcCCcEE------EEE-eecCCCC-----------------CCceEeecc-cccccch
Q 007473 129 YLIGNQFSSDCSDV--PITKALKRGVRVI------ELD-LWPNSAK-----------------DDVLVLHGR-TLTTPVE 181 (602)
Q Consensus 129 YL~g~Ql~g~Ss~e--~Y~~aL~~GCRcv------ElD-~WdG~~~-----------------~~piv~HG~-Tlts~i~ 181 (602)
+|++-.++|++.-| ++.+|++.=+.-+ -+| ||-|.|+ +-||+-||. ..||+..
T Consensus 233 fL~alr~kget~~El~g~~~a~~~~~~~~~~~~~~~~D~~gtggdg~~t~nist~~a~v~A~~G~~V~kHG~r~~ss~~G 312 (534)
T PRK14607 233 FLTALRMKGETADELAGFASVMREKSRHIPAPSPRTVDTCGTGGDGFGTFNISTTSAFVVAAAGVPVAKHGNRAVSSKSG 312 (534)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhCCcCCCCCCCceEEccCCCCCCCccccHHHHHHHHHhCCCcEEEECCCCCCCCcc
Confidence 45555566776544 6778876544322 255 5766543 458999995 5777777
Q ss_pred HHHHHHHHh
Q 007473 182 LIKCLRAIK 190 (602)
Q Consensus 182 f~dvi~aI~ 190 (602)
-.||++++.
T Consensus 313 sadvle~lG 321 (534)
T PRK14607 313 SADVLEALG 321 (534)
T ss_pred HHHHHHHcC
Confidence 778888764
No 290
>smart00268 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Probab=23.10 E-value=81 Score=33.77 Aligned_cols=45 Identities=20% Similarity=0.219 Sum_probs=37.0
Q ss_pred HHHHHHHhhcccc------cCCCceEEEecCCCCHHHHHHHHHHHHHHhhc
Q 007473 183 IKCLRAIKENAFS------ASPYPVILTFEDHLNPHLQAKVAQMITQTFGA 227 (602)
Q Consensus 183 ~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd 227 (602)
.|+++.|=+|.|. .+++||+|+.=...+..+++.|+++|-+.||-
T Consensus 74 ~~~~e~i~~~~~~~~l~~~~~~~~vll~~p~~~~~~~r~~~~e~lfE~~~~ 124 (373)
T smart00268 74 WDDMEKIWDYTFFNELRVEPEEHPVLLTEPPMNPKSNREKILEIMFETFNF 124 (373)
T ss_pred HHHHHHHHHHHHhhhcCCCCccCeeEEecCCCCCHHHHHHHHHHhhccCCC
Confidence 5777777777775 25799999866677799999999999999984
No 291
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=22.66 E-value=1.1e+02 Score=19.68 Aligned_cols=24 Identities=13% Similarity=0.459 Sum_probs=18.7
Q ss_pred HHHHHHHhhCC-CCccCHHHHHHHH
Q 007473 28 VKEMFKKYAEG-GTHMTAEQLWQFL 51 (602)
Q Consensus 28 l~~if~~~~~~-~~~l~~~~~~~Fl 51 (602)
|+..|+.+=.+ ...++.++|..|+
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 46678887544 5899999999875
No 292
>cd00466 DHQase_II Dehydroquinase (DHQase), type II. Dehydroquinase (or 3-dehydroquinate dehydratase) catalyzes the reversible dehydration of 3-dehydroquinate to form 3-dehydroshikimate. This reaction is part of two metabolic pathways: the biosynthetic shikimate pathway and the catabolic quinate pathway. There are two types of DHQases, which are distinct from each other in amino acid sequence and three-dimensional structure. Type I enzymes usually catalyze the biosynthetic reaction using a syn elimination mechanism. In contrast, type II enzymes, found in the quinate pathway of fungi and in the shikimate pathway of many bacteria, are dodecameric enzymes that employ an anti elimination reaction mechanism.
Probab=22.47 E-value=77 Score=29.67 Aligned_cols=68 Identities=19% Similarity=0.313 Sum_probs=46.1
Q ss_pred ccCCCCChHHHHHHHhcCCc--EEEEEeecCC-------------CCCCceEeeccccc-ccchHHHHHHHHhhcccccC
Q 007473 134 QFSSDCSDVPITKALKRGVR--VIELDLWPNS-------------AKDDVLVLHGRTLT-TPVELIKCLRAIKENAFSAS 197 (602)
Q Consensus 134 Ql~g~Ss~e~Y~~aL~~GCR--cvElD~WdG~-------------~~~~piv~HG~Tlt-s~i~f~dvi~aI~~~AF~~S 197 (602)
.+.|.-+.+.+.+.|..-|+ -+|++|.-.. ++-..||.--..+| ++|..+|++.++.
T Consensus 19 ~iYG~~tl~~i~~~l~~~a~~~g~~v~~~QSN~Egelid~I~~a~~~~dgiIINpga~THtSvAi~DAl~~~~------- 91 (140)
T cd00466 19 EIYGTTTLADIEALLRELAAELGVEVEFFQSNHEGELIDWIHEARDGADGIIINPGAYTHTSIALRDALAAVS------- 91 (140)
T ss_pred CcCCcCCHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHHhhccCcEEEEcchHHHHHHHHHHHHHHcCC-------
Confidence 36688888888888877665 5788885211 11124555555666 8899999998874
Q ss_pred CCceEEEecCCCCHH
Q 007473 198 PYPVILTFEDHLNPH 212 (602)
Q Consensus 198 ~yPvILSlE~Hcs~~ 212 (602)
.|+ +|+|.|-.
T Consensus 92 -~P~---VEVHiSNi 102 (140)
T cd00466 92 -IPV---IEVHISNI 102 (140)
T ss_pred -CCE---EEEecCCc
Confidence 565 59998753
No 293
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=22.14 E-value=1.1e+02 Score=32.27 Aligned_cols=74 Identities=24% Similarity=0.258 Sum_probs=41.0
Q ss_pred CcccccCC----------ccCCCCChHH---HHHHH--hcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHHh
Q 007473 126 HNSYLIGN----------QFSSDCSDVP---ITKAL--KRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIK 190 (602)
Q Consensus 126 HNTYL~g~----------Ql~g~Ss~e~---Y~~aL--~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~ 190 (602)
-|+||++. +-.|-+|.-. +...| +.-|||+-+|.=-- ++-.+---.-|.-.---+|+...|+
T Consensus 62 ~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgH---GeTk~~~e~dlS~eT~~KD~~~~i~ 138 (343)
T KOG2564|consen 62 FNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGH---GETKVENEDDLSLETMSKDFGAVIK 138 (343)
T ss_pred EEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeecccc---CccccCChhhcCHHHHHHHHHHHHH
Confidence 48999987 2334455433 34455 35899988887421 0111111122333344567775454
Q ss_pred hcccccCCCceEE
Q 007473 191 ENAFSASPYPVIL 203 (602)
Q Consensus 191 ~~AF~~S~yPvIL 203 (602)
+-|...+=||||
T Consensus 139 -~~fge~~~~iil 150 (343)
T KOG2564|consen 139 -ELFGELPPQIIL 150 (343)
T ss_pred -HHhccCCCceEE
Confidence 458888888887
No 294
>PLN02964 phosphatidylserine decarboxylase
Probab=21.58 E-value=2.5e+02 Score=32.95 Aligned_cols=64 Identities=8% Similarity=0.115 Sum_probs=49.1
Q ss_pred hHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhcCC
Q 007473 27 DVKEMFKKYAEG-GTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLFST 99 (602)
Q Consensus 27 el~~if~~~~~~-~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~S~ 99 (602)
++..+|..+-.+ ...|+.++|..+|.. .++ ..+.+++++++..|..+ +.+.++.++|.+.|.+.
T Consensus 180 fi~~mf~~~D~DgdG~IdfdEFl~lL~~-lg~-~~seEEL~eaFk~fDkD-------gdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 180 FARRILAIVDYDEDGQLSFSEFSDLIKA-FGN-LVAANKKEELFKAADLN-------GDGVVTIDELAALLALQ 244 (644)
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHH-hcc-CCCHHHHHHHHHHhCCC-------CCCcCCHHHHHHHHHhc
Confidence 378899988544 478999999999986 444 35677888888887632 24689999999998864
No 295
>PF00977 His_biosynth: Histidine biosynthesis protein; InterPro: IPR006062 Histidine is formed by several complex and distinct biochemical reactions catalysed by eight enzymes. Proteins involved in steps 4 and 6 of the histidine biosynthesis pathway are contained in one family. These enzymes are called His6 and His7 in eukaryotes and HisA and HisF in prokaryotes. HisA is a phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (5.3.1.16 from EC), involved in the fourth step of histidine biosynthesis. The bacterial HisF protein is a cyclase which catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate during the sixth step of histidine biosynthesis. The yeast His7 protein is a bifunctional protein which catalyzes an amido-transferase reaction that generates imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide. The latter is the ribonucleotide used for purine biosynthesis. The enzyme also catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate, and is involved in the fifth and sixth steps in histidine biosynthesis.; GO: 0000105 histidine biosynthetic process; PDB: 2VEP_A 2X30_A 1VZW_A 2WJZ_A 2LLE_A 2A0N_A 1THF_D 1GPW_E 1VH7_A 1KA9_F ....
Probab=21.25 E-value=1.5e+02 Score=29.75 Aligned_cols=39 Identities=15% Similarity=0.173 Sum_probs=32.7
Q ss_pred CcEEEEEeecCCCCCCceEeecccccccchHHHHHHHHhhccc
Q 007473 152 VRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIKENAF 194 (602)
Q Consensus 152 CRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF 194 (602)
+=+|-||+.+| -.+.++||.-.+.+...+.++...+..+
T Consensus 123 ~ivvslD~~~g----~~v~~~gw~~~~~~~~~~~~~~~~~~g~ 161 (229)
T PF00977_consen 123 RIVVSLDARDG----YKVATNGWQESSGIDLEEFAKRLEELGA 161 (229)
T ss_dssp GEEEEEEEEET----EEEEETTTTEEEEEEHHHHHHHHHHTT-
T ss_pred cEEEEEEeeec----eEEEecCccccCCcCHHHHHHHHHhcCC
Confidence 44667999995 2589999999999999999999988864
No 296
>PF13860 FlgD_ig: FlgD Ig-like domain; PDB: 3C12_A 3OSV_A.
Probab=21.23 E-value=4.7e+02 Score=21.52 Aligned_cols=64 Identities=16% Similarity=0.206 Sum_probs=41.5
Q ss_pred EEEEEeecCCcc-EEEEEEEecCCCCCCCccEEEEEeCCCccCccEEEEc--cCCCCCccCCeEEEEEEEEEE
Q 007473 528 EFTFPLTIPEMA-LLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHAVPL--FDRKGEELGSARLLMRFEFYE 597 (602)
Q Consensus 528 tf~F~v~~pela-~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~ipL--~d~~g~~l~~asL~v~i~~~e 597 (602)
...|.+..++-+ -+++.|+|.. ..++- .+++.....|...+.+ +|..|.+++.+.-.+++.-..
T Consensus 13 ~~~~~~~l~~~a~~v~v~I~d~~----G~~V~--t~~~~~~~~G~~~~~WdG~d~~G~~~~~G~Y~~~v~a~~ 79 (81)
T PF13860_consen 13 KGSIEYTLPEDADNVTVTIYDSN----GQVVR--TISLGSQSAGEHSFTWDGKDDDGNPVPDGTYTFRVTATD 79 (81)
T ss_dssp EEEEEEEECSSCEEEEEEEEETT----S-EEE--EEEEEECSSEEEEEEE-SB-TTS-B--SEEEEEEEEEEE
T ss_pred EEEEEEeCCCcccEEEEEEEcCC----CCEEE--EEEcCCcCCceEEEEECCCCCCcCCCCCCCEEEEEEEEe
Confidence 455665566644 5899999864 34443 4566777888776655 689999999999998887543
No 297
>PF14909 SPATA6: Spermatogenesis-assoc protein 6
Probab=21.22 E-value=6.9e+02 Score=23.45 Aligned_cols=80 Identities=20% Similarity=0.273 Sum_probs=50.7
Q ss_pred EEEEEEeccCcccCccCcCCCCCCCCCceEEEEEecCCCCcccccccCCCCCCCCeeccEEEEEeecCC-----------
Q 007473 469 LKVKAYMGDGWYLDFKQMDCKFWSPPQFYTRVGIAGVPADKKMKSTKKKVDNWTPVWDDEFTFPLTIPE----------- 537 (602)
Q Consensus 469 L~V~Visa~~L~~~~~~~~~d~~s~~DpyV~V~i~G~p~d~~k~kTkvi~nn~nPvWNEtf~F~v~~pe----------- 537 (602)
|+|+-+++-|..+. ...|.|..|.+.| +-++|+.....|=-.++|.|.|.-.++.
T Consensus 4 L~i~aVTCPGv~L~---------~~~~vyL~v~~lg-----~~~~T~~~ppvFPllfhek~~FeK~F~~~~dp~~l~~~L 69 (140)
T PF14909_consen 4 LEIHAVTCPGVWLC---------DKGDVYLSVCILG-----QYKRTRCLPPVFPLLFHEKFRFEKVFPNAVDPAQLADLL 69 (140)
T ss_pred EEEEEEecCCeEeC---------CCCCEEEEEEEcc-----cEeecccCCCcCCeeEeeEEEeEEEecCCCCHHHHHHHh
Confidence 56666666554432 1246799999998 5678887665555567999999743321
Q ss_pred -ccEEEEEEEecCCCCCCCccEEEEEe
Q 007473 538 -MALLRVEVRKYSMPEKDEFAGQTCLP 563 (602)
Q Consensus 538 -la~Lrf~V~D~d~~~~dd~lGq~~lp 563 (602)
--.++|.++...... ...|+.+.-.
T Consensus 70 e~e~~~iELiQl~~~~-g~iLA~ye~n 95 (140)
T PF14909_consen 70 EDETVYIELIQLVPPA-GEILAYYEEN 95 (140)
T ss_pred hcCcEEEEEEEEeCCC-CcEEEEEecc
Confidence 135778887755433 5677776543
No 298
>PTZ00004 actin-2; Provisional
Probab=21.07 E-value=1.1e+02 Score=33.08 Aligned_cols=46 Identities=20% Similarity=0.176 Sum_probs=36.6
Q ss_pred HHHHHHHhhcccc------cCCCceEEEecCCCCHHHHHHHHHHHHHHhhcc
Q 007473 183 IKCLRAIKENAFS------ASPYPVILTFEDHLNPHLQAKVAQMITQTFGAM 228 (602)
Q Consensus 183 ~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~ 228 (602)
.|+++.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||-.
T Consensus 80 ~d~~e~i~~~~~~~~l~v~~~~~pvllte~~~~~~~~r~~~~e~lFE~~~~~ 131 (378)
T PTZ00004 80 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETHNVP 131 (378)
T ss_pred HHHHHHHHHHHHHhhcccCCccCcceeecCCCCcHHHHHHHHHHHHhhcCCc
Confidence 4667777777663 368999998666778888899999999999953
No 299
>PF07162 B9-C2: Ciliary basal body-associated, B9 protein; InterPro: IPR010796 Proteins in this entry include the MSK1 protein (Q9NXB0 from SWISSPROT) and other known or predicted flagellar basal body proteome components [] or cilia-containing species. Although the function is unknown, a cilia-specific role has been suggested for the poorly characterised B9 domain [, , ]. Mutations in MSK1 have been shown to cause Meckel syndrome type 1, a severe foetal development disorder that has been reported in most populations.
Probab=20.98 E-value=3.1e+02 Score=26.17 Aligned_cols=57 Identities=19% Similarity=0.304 Sum_probs=39.4
Q ss_pred CCeeccEEEEEeecCCc---cEEEEEEEecCCCCCCCccEEEEEeCCCccCccEE--EEccCC
Q 007473 522 TPVWDDEFTFPLTIPEM---ALLRVEVRKYSMPEKDEFAGQTCLPVFQLRPGIHA--VPLFDR 579 (602)
Q Consensus 522 nPvWNEtf~F~v~~pel---a~Lrf~V~D~d~~~~dd~lGq~~lpL~~L~~GyR~--ipL~d~ 579 (602)
.-+||.-|++.+..... -.|.|+|+..|..+++.+.|...+.|- +.+|+.. +|+.-+
T Consensus 56 ~~~f~~P~d~~~~~~~~~gwP~L~l~V~~~D~~gr~~~~GYG~~~lP-~~pG~h~~~v~~wrP 117 (168)
T PF07162_consen 56 VAVFNHPFDLHFKSTNPQGWPQLVLQVYSLDSWGRDRVEGYGFCHLP-TQPGRHEVEVPTWRP 117 (168)
T ss_pred ceEEeccEEEEEEeCCCCCCceEEEEEEEEcccCCeEEeEEeEEEeC-CCCceEEEEEEEEee
Confidence 45699888777654332 368899999999998999997666553 3488643 454444
No 300
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=20.95 E-value=2.1e+02 Score=29.51 Aligned_cols=84 Identities=21% Similarity=0.271 Sum_probs=61.5
Q ss_pred cCCcccccCCccCCCCChH-HHHHHH-hcCCcEEEEEeecCCCCCCceEeecccccccchHHHHHHHHhhcccccCCCce
Q 007473 124 TGHNSYLIGNQFSSDCSDV-PITKAL-KRGVRVIELDLWPNSAKDDVLVLHGRTLTTPVELIKCLRAIKENAFSASPYPV 201 (602)
Q Consensus 124 SSHNTYL~g~Ql~g~Ss~e-~Y~~aL-~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPv 201 (602)
..+|.-|.|.-=+|+||.- +....+ ..|+|.||++=-+= ..+-++++.|+. .+|+-
T Consensus 51 pannvLL~G~rGtGKSSlVkall~~y~~~GLRlIev~k~~L-----------------~~l~~l~~~l~~-----~~~kF 108 (249)
T PF05673_consen 51 PANNVLLWGARGTGKSSLVKALLNEYADQGLRLIEVSKEDL-----------------GDLPELLDLLRD-----RPYKF 108 (249)
T ss_pred CCcceEEecCCCCCHHHHHHHHHHHHhhcCceEEEECHHHh-----------------ccHHHHHHHHhc-----CCCCE
Confidence 5678999999999999853 333333 45999999954432 124588888873 47888
Q ss_pred EEEecCCCCHHHHHHHHHHHHHHhhcccC
Q 007473 202 ILTFEDHLNPHLQAKVAQMITQTFGAMLY 230 (602)
Q Consensus 202 ILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~ 230 (602)
||=+.+ .|.+..+.-.+.||.++---|-
T Consensus 109 Ilf~DD-LsFe~~d~~yk~LKs~LeGgle 136 (249)
T PF05673_consen 109 ILFCDD-LSFEEGDTEYKALKSVLEGGLE 136 (249)
T ss_pred EEEecC-CCCCCCcHHHHHHHHHhcCccc
Confidence 988876 8888888888899998864443
No 301
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=20.13 E-value=3.3e+02 Score=26.72 Aligned_cols=62 Identities=15% Similarity=0.293 Sum_probs=41.4
Q ss_pred CchhHHHHHHHh---hC--CCCccCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccccccCCCcCHHHHHHHhc
Q 007473 24 PPADVKEMFKKY---AE--GGTHMTAEQLWQFLVEVQGHGGVSIEDAEQIVDQVLQRWHHIARFTRRSLTVEDFHHYLF 97 (602)
Q Consensus 24 ~r~el~~if~~~---~~--~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~gF~~~L~ 97 (602)
++.||..|+..| .. +...||.++|..-..-.+ .+ -+..||+.+.... .+..+++.+|.+.|-
T Consensus 28 s~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~~-Np-----~~~rI~~~f~~~~------~~~~v~F~~Fv~~ls 94 (187)
T KOG0034|consen 28 SANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELAL-NP-----LADRIIDRFDTDG------NGDPVDFEEFVRLLS 94 (187)
T ss_pred CHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHhc-Cc-----HHHHHHHHHhccC------CCCccCHHHHHHHHh
Confidence 356877765555 43 358899999999884333 22 3678888887321 112299999999983
Done!