Query 007476
Match_columns 602
No_of_seqs 189 out of 430
Neff 4.5
Searched_HMMs 29240
Date Tue Mar 26 18:05:45 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/007476.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2187-2191//hhsearch_pdb/007476hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h5c_A Alpha-lytic protease; s 1.0 1 1 159.2 14.9 179 219-455 15-198 (198)
2 2oua_A Serine protease, protei 1.0 1 1 147.4 14.5 176 219-454 13-188 (188)
3 2pfe_A Protease A, alkaline se 1.0 1 1 144.9 15.7 173 219-455 14-186 (186)
4 1hpg_A Glutamic acid specific 1.0 1 1 144.0 14.5 176 218-453 11-187 (187)
5 2sga_A Proteinase A; hydrolase 1.0 1 1 132.3 12.1 170 218-453 11-181 (181)
6 2ea3_A Chymotrypsin; celloulom 1.0 1 1 124.9 12.8 173 218-458 14-186 (189)
7 2qa9_E Streptogrisin-B; chymot 1.0 1 1 108.3 16.9 174 218-453 11-185 (185)
8 4fln_A Protease DO-like 2, chl 1.0 1 1 68.7 15.2 162 219-448 74-240 (539)
9 1l1j_A Heat shock protease HTR 1.0 1 1 65.4 16.8 162 224-450 60-225 (239)
10 4a8c_A Periplasmic PH-dependen 1.0 1 1 65.1 12.3 158 224-449 67-229 (436)
No 1
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=1.00 E-value=1 Score=159.25 Aligned_cols=179 Identities=19% Similarity=0.262 Sum_probs=124.6
Q ss_pred CEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 40114799982899843699133930026898776678999983287545898223310254010133225899864123
Q 007476 219 TYGTLGAIVRSRTGNQQVGFLTNRHVAVDLDYPNQKMFHPLPPSLGPGVYLGAVERATSFITDDLWYGIFAGTNPETFVR 298 (602)
Q Consensus 219 taGTLGcLV~D~~G~~~~yiLSNnHVla~~n~~~q~~~~pg~pIlQPG~~DGG~~r~~kfipl~~~~~i~~g~np~N~VD 298 (602)
..+|+||+|++. ...|||||+||..... ++. .|+ ...-+++..++ |.+
T Consensus 15 ~~CT~Gf~v~~~---~~~~ilTa~Hc~~~~~-----------~v~----~~~--~~~g~vv~~~~---------~~~--- 62 (198)
T 2h5c_A 15 SLCSVGFSVTRG---ATKGFVTAGHCGTVNA-----------TAR----IGG--AVVGTFAARVF---------PGN--- 62 (198)
T ss_dssp EEEECCEEEEET---TEEEEEECGGGCCTTC-----------EEE----ETT--EEEEEEEEEEC---------SBS---
T ss_pred CCCCCCEEEECC---CEEEEEECCCCCCCCC-----------EEE----ECC--CEEEEEEECCC---------CCC---
T ss_conf 989858888649---7359998802188898-----------797----489--27999974489---------998---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCEEEEEEE
Q ss_conf 55221234444688876654333343585013304676553479909995302563389999999999189993999899
Q 007476 299 ADGAFIPFAEDFNLNNVTTSVKGVGEIGDVHIIDLQSPINSLIGRQVMKVGRSSGLTTGTVMAYALEYNDEKGICFFTDF 378 (602)
Q Consensus 299 aD~AlI~~a~~~d~s~vs~~I~~iG~IG~v~~vdlqg~~~p~iG~~V~KvGRTTGlT~G~I~ai~V~y~~~~G~~~F~dq 378 (602)
|+|++++... ...++.|.. .|.. +.+.+...+.+|+.|+|+|++||+|+|.|.++.....+..+ .|+++
T Consensus 63 -D~Avi~i~~~---~~~~~~v~~---~g~~--~~v~g~~~~~vG~~V~~~G~~tg~t~G~V~~~~~~~~~~~g--~~~~~ 131 (198)
T 2h5c_A 63 -DRAWVSLTSA---QTLLPRVAN---GSSF--VTVRGSTEAAVGAAVCRSGRTTGYQCGTITAKNVTANYAEG--AVRGL 131 (198)
T ss_dssp -CEEEEEECTT---SEEEEEEEE---TTEE--EECCBCCCCCTTCEEEEEETTTEEEEEEEEEEEEEEEETTE--EEEEE
T ss_pred -CEEEEEECCC---CCCCCEEEC---CCCE--EEECCCCCCCCCCEEEEEECCCCEEEEEEEEEEEEEEECCC--EEEEE
T ss_conf -8899995798---731750706---8845--87647545899984998545861379999964027971897--08416
Q ss_pred EEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECC-----CCCCCCCCCCCCCCCCEEEEECHHHHHHHCCCEEE
Q ss_conf 9977888887899983314795124899992399997046-----88765211138999531785625988875196698
Q 007476 379 LVVGENQQTFDLEGDSGSLILLTGQNGEKPRPVGIIWGGT-----ANRGRLKLKVGQPPVNWTSGVDLGRLLDLLELDLI 453 (602)
Q Consensus 379 IIt~~~~~~FS~~GDSGSlVl~~~~~d~~~~~VGLlfGGs-----~~~gr~~~~~g~~p~~~Tl~npI~~VL~~L~V~Lv 453 (602)
+.+.. ++.+||||+.|+ +.++++|||++++. .++ . +...+..++|+||..+|+.|+|+|+
T Consensus 132 i~t~~----~~~~GDSGGPl~-----~~~g~~vGI~s~~~~~~~~~~c-----~-~~~~~g~~f~~Pi~~vl~~~gv~l~ 196 (198)
T 2h5c_A 132 TQGNA----CMGRGDSGGSWI-----TSAGQAQGVMSGGNVQSNGNNC-----G-IPASQRSSLFERLQPILSQYGLSLV 196 (198)
T ss_dssp EEECS----CCBTTCTTCEEE-----CTTCBEEEEEEEECCCTTSBST-----T-SCGGGCCEEEEEHHHHHHHHTCEEC
T ss_pred EEECC----CCCCCCCEEEEE-----EECCEEEEEEEEECCCCCCCCC-----C-CCCCCCEEEEEEHHHHHHHCCCEEE
T ss_conf 99654----289996423899-----4399999999854575678864-----3-2467864999997998987891994
Q ss_pred EC
Q ss_conf 06
Q 007476 454 AT 455 (602)
Q Consensus 454 T~ 455 (602)
|.
T Consensus 197 t~ 198 (198)
T 2h5c_A 197 TG 198 (198)
T ss_dssp CC
T ss_pred CC
T ss_conf 39
No 2
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=1.00 E-value=1 Score=147.35 Aligned_cols=176 Identities=20% Similarity=0.218 Sum_probs=119.4
Q ss_pred CEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 40114799982899843699133930026898776678999983287545898223310254010133225899864123
Q 007476 219 TYGTLGAIVRSRTGNQQVGFLTNRHVAVDLDYPNQKMFHPLPPSLGPGVYLGAVERATSFITDDLWYGIFAGTNPETFVR 298 (602)
Q Consensus 219 taGTLGcLV~D~~G~~~~yiLSNnHVla~~n~~~q~~~~pg~pIlQPG~~DGG~~r~~kfipl~~~~~i~~g~np~N~VD 298 (602)
..+|+||+|++..| ..|+|||+||..... ++.+. | ..-+++..++ |.+
T Consensus 13 ~~CTsGf~v~~~~G--~~~ilTa~Hc~~~g~-----------~v~~~---d----~~g~v~~~~~---------p~~--- 60 (188)
T 2oua_A 13 GRCSVGFAATNASG--QPGFVTAGHCGSVGT-----------QVSIG---N----GRGVFERSVF---------PGN--- 60 (188)
T ss_dssp SEEECCEEEECTTC--CEEEEECGGGCCTTC-----------EEEET---T----EEEEEEEEEC---------SBS---
T ss_pred CCEECCEEEEECCC--CEEEEECCCCCCCCC-----------EEEEC---C----CEEEEEEECC---------CCC---
T ss_conf 96843899990899--789999711187799-----------89945---8----5199986179---------999---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCEEEEEEE
Q ss_conf 55221234444688876654333343585013304676553479909995302563389999999999189993999899
Q 007476 299 ADGAFIPFAEDFNLNNVTTSVKGVGEIGDVHIIDLQSPINSLIGRQVMKVGRSSGLTTGTVMAYALEYNDEKGICFFTDF 378 (602)
Q Consensus 299 aD~AlI~~a~~~d~s~vs~~I~~iG~IG~v~~vdlqg~~~p~iG~~V~KvGRTTGlT~G~I~ai~V~y~~~~G~~~F~dq 378 (602)
|+|++++... ...++.|..++.. ..+.+.+...+.+|+.|+|+|++||+|+|.|.+++....+..+ .+.++
T Consensus 61 -DiAlikl~~~---~~~~~~v~~~g~~---~~~~l~~~~~~~vG~~v~~~G~~tG~t~G~v~~~~~~v~~~~~--~~~~~ 131 (188)
T 2oua_A 61 -DAAFVRGTSN---FTLTNLVSRYNSG---GYATVSGSSTAPIGSQVCRSGSTTGWYCGTIQARNQTVSYPQG--TVHSL 131 (188)
T ss_dssp -CEEEEEEEES---CEEEEEEECGGGC---SEEECCBCCCCCTTCEEEEEETTTEEEEEEEEEEEEEEEETTE--EEEEE
T ss_pred -CEEEEEECCC---CCCCCCEEECCCC---CEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEEEEECCC--CEEEE
T ss_conf -9999994798---7416616605874---3276357557999994999984788589999977208970897--48524
Q ss_pred EEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHHHCCCEEEE
Q ss_conf 9977888887899983314795124899992399997046887652111389995317856259888751966980
Q 007476 379 LVVGENQQTFDLEGDSGSLILLTGQNGEKPRPVGIIWGGTANRGRLKLKVGQPPVNWTSGVDLGRLLDLLELDLIA 454 (602)
Q Consensus 379 IIt~~~~~~FS~~GDSGSlVl~~~~~d~~~~~VGLlfGGs~~~gr~~~~~g~~p~~~Tl~npI~~VL~~L~V~LvT 454 (602)
+.+.. ++.+||||+.++ . +++++|++.++...+ .....++|+||..+|+.|+|+|+|
T Consensus 132 ~~~~~----~~~~GDSGgpl~-----~-~~~~vGi~s~~~~~~---------~~~~~~~~~pi~~~l~~~gv~l~t 188 (188)
T 2oua_A 132 TRTSV----CAEPGDSGGSFI-----S-GTQAQGVTSGGSGNC---------RTGGTTFYQEVNPMLNSWNLRLRT 188 (188)
T ss_dssp EEESC----CCCTTCTTCEEE-----E-TTEEEEEEEEEEEET---------TTEEEEEEEESHHHHHHTTCEECC
T ss_pred EEEEE----ECCCCCCCCEEE-----E-CCEEEEEEECCCCCC---------CCCCCEEEEEHHHHHHHCCCEEEC
T ss_conf 86103----347998426488-----8-999999993257887---------788814999989989775969949
No 3
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=1.00 E-value=1 Score=144.86 Aligned_cols=173 Identities=21% Similarity=0.263 Sum_probs=118.6
Q ss_pred CEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 40114799982899843699133930026898776678999983287545898223310254010133225899864123
Q 007476 219 TYGTLGAIVRSRTGNQQVGFLTNRHVAVDLDYPNQKMFHPLPPSLGPGVYLGAVERATSFITDDLWYGIFAGTNPETFVR 298 (602)
Q Consensus 219 taGTLGcLV~D~~G~~~~yiLSNnHVla~~n~~~q~~~~pg~pIlQPG~~DGG~~r~~kfipl~~~~~i~~g~np~N~VD 298 (602)
..+|+||+|+++ ...|||||+||..... ++.. ..| +++.-+ .|.+
T Consensus 14 ~~CT~Gf~v~~~---~~~~ilTa~Hc~~~g~-----------~v~~---~~g------~v~~~~---------~~~~--- 58 (186)
T 2pfe_A 14 YRCSIGFSVRQG---SQTGFATAGHCGSTGT-----------RVSS---PSG------TVAGSY---------FPGR--- 58 (186)
T ss_dssp EEEECCEEEEET---TEEEEEECGGGCCTTC-----------EEBT---TTE------EEEEEE---------CSBS---
T ss_pred CCEEEEEEEECC---CEEEEEECHHHCCCCC-----------EEEE---EEE------EEEECC---------CCCC---
T ss_conf 849814899829---8669998812288999-----------8998---469------998127---------9999---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCEEEEEEE
Q ss_conf 55221234444688876654333343585013304676553479909995302563389999999999189993999899
Q 007476 299 ADGAFIPFAEDFNLNNVTTSVKGVGEIGDVHIIDLQSPINSLIGRQVMKVGRSSGLTTGTVMAYALEYNDEKGICFFTDF 378 (602)
Q Consensus 299 aD~AlI~~a~~~d~s~vs~~I~~iG~IG~v~~vdlqg~~~p~iG~~V~KvGRTTGlT~G~I~ai~V~y~~~~G~~~F~dq 378 (602)
|+|++++... ...++.|...+ |.+ +.+.+...+.+|+.|+|+|++||+|+|.|.+++.......+ .|.++
T Consensus 59 -D~Alikl~~~---~~~~~~v~~~~--g~~--~~i~~~~~~~vG~~vc~~G~~tG~t~G~vs~~~~tv~~~~~--~~~~~ 128 (186)
T 2pfe_A 59 -DMGWVRITSA---DTVTPLVNRYN--GGT--VTVTGSQEAATGSSVCRSGATTGWRCGTIQSKNQTVRYAEG--TVTGL 128 (186)
T ss_dssp -CEEEEEECTT---SEEEEEEECSS--SCE--EECCBCCCCCTTCEEEEEETTTEEEEEEEEEEEEEEEETTE--EEEEE
T ss_pred -CEEEEEECCC---CCCCCCEECCC--CCE--EECCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEEEECCC--EEECE
T ss_conf -8999996898---63165166268--846--85488777999996999980883689999999626986895--08553
Q ss_pred EEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHHHCCCEEEEC
Q ss_conf 99778888878999833147951248999923999970468876521113899953178562598887519669806
Q 007476 379 LVVGENQQTFDLEGDSGSLILLTGQNGEKPRPVGIIWGGTANRGRLKLKVGQPPVNWTSGVDLGRLLDLLELDLIAT 455 (602)
Q Consensus 379 IIt~~~~~~FS~~GDSGSlVl~~~~~d~~~~~VGLlfGGs~~~gr~~~~~g~~p~~~Tl~npI~~VL~~L~V~LvT~ 455 (602)
+.+.. +..+||||+.++ . +++++|++.++...+ .....++|+||..+|+.|+|+|+|.
T Consensus 129 ~~~~~----c~~~GDSGgpl~-----~-~~~~vGi~s~g~~~c---------~~~~~~~~~pi~~~l~~~gv~l~t~ 186 (186)
T 2pfe_A 129 TRTTA----CAEGGDSGGPWL-----T-GSQAQGVTSGGTGDC---------RSGGITFFQPINPLLSYFGLQLVTG 186 (186)
T ss_dssp EEESC----CCCTTCTTCEEE-----E-TTEEEEEEEEEEEET---------TTEEEEEEEEHHHHHHHHTCEECCC
T ss_pred EECCE----EECCCCCCCEEE-----E-CCEEEEEEEECCCCC---------CCCCCEEEEEHHHHHHHCCEEEECC
T ss_conf 73108----705898567179-----8-999999995248988---------7888589999899898789299439
No 4
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=1.00 E-value=1 Score=144.04 Aligned_cols=176 Identities=17% Similarity=0.198 Sum_probs=117.2
Q ss_pred CCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 540114799982899843699133930026898776678999983287-5458982233102540101332258998641
Q 007476 218 ETYGTLGAIVRSRTGNQQVGFLTNRHVAVDLDYPNQKMFHPLPPSLGP-GVYLGAVERATSFITDDLWYGIFAGTNPETF 296 (602)
Q Consensus 218 ~taGTLGcLV~D~~G~~~~yiLSNnHVla~~n~~~q~~~~pg~pIlQP-G~~DGG~~r~~kfipl~~~~~i~~g~np~N~ 296 (602)
...+|+||+|++. ...|||||+||....+.. ...+.+ || + .+.--+ + |.|
T Consensus 11 ~~~CT~Gfiv~~~---g~~~ilT~~Hv~~~~~~v-----~~~~~~-~~~g----------~~~~~~-----~----~~~- 61 (187)
T 1hpg_A 11 GSRCSAAFNVTKG---GARYFVTAGHCTNISANW-----SASSGG-SVVG----------VREGTS-----F----PTN- 61 (187)
T ss_dssp TEEEECCEEEEET---TEEEEEECHHHHTTCSEE-----ESSTTC-CEEE----------EEEEEE-----C----SBS-
T ss_pred CCCCCCEEEEEEC---CEEEEEECCCCCCCCCEE-----EECCCC-EEEE----------EEECCC-----C----CCC-
T ss_conf 9808425999979---934999890308889858-----808996-0689----------886742-----8----999-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCEEEEE
Q ss_conf 23552212344446888766543333435850133046765534799099953025633899999999991899939998
Q 007476 297 VRADGAFIPFAEDFNLNNVTTSVKGVGEIGDVHIIDLQSPINSLIGRQVMKVGRSSGLTTGTVMAYALEYNDEKGICFFT 376 (602)
Q Consensus 297 VDaD~AlI~~a~~~d~s~vs~~I~~iG~IG~v~~vdlqg~~~p~iG~~V~KvGRTTGlT~G~I~ai~V~y~~~~G~~~F~ 376 (602)
|+|++++... ...+.+..++. |.. +.+.+...+.+|+.|+|+|++||+|+|.|.+++....+..+ .+.
T Consensus 62 ---DiAlikl~~~----~~~~~~v~~~~-g~~--~~i~~~~~~~~G~~v~~~G~~~g~t~G~v~~~~~~v~~~~~--~~~ 129 (187)
T 1hpg_A 62 ---DYGIVRYTDG----SSPAGTVDLYN-GST--QDISSAANAVVGQAIKKSGSTTKVTSGTVTAVNVTVNYGDG--PVY 129 (187)
T ss_dssp ---CEEEEEECSS----CCCCSEEECSS-SCE--EECCEECCCCTTCEEEEEETTTEEEEEEEEEEEEEEEETTE--EEE
T ss_pred ---CEEEEEECCC----CCCCCEEEECC-CCE--EEECCCCCCCCCCEEEEEECCCCEEEEEEEEEEEEEEECCC--EEE
T ss_conf ---8999995788----77675388258-861--41026467999997999986888748999984799991898--596
Q ss_pred EEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHHHCCCEEE
Q ss_conf 99997788888789998331479512489999239999704688765211138999531785625988875196698
Q 007476 377 DFLVVGENQQTFDLEGDSGSLILLTGQNGEKPRPVGIIWGGTANRGRLKLKVGQPPVNWTSGVDLGRLLDLLELDLI 453 (602)
Q Consensus 377 dqIIt~~~~~~FS~~GDSGSlVl~~~~~d~~~~~VGLlfGGs~~~gr~~~~~g~~p~~~Tl~npI~~VL~~L~V~Lv 453 (602)
++|.+.. ++.+||||+.++ +. ++++|+++++...+ ..+..++|.||..+++.|+|+|+
T Consensus 130 ~~i~t~~----~~~~GdSGgpl~-----~~-~~~vGi~s~~~~~~---------~~~~~~~~~~i~~~~~~lgv~l~ 187 (187)
T 1hpg_A 130 NMVRTTA----CSAGGDSGGAHF-----AG-SVALGIHSGSSGCS---------GTAGSAIHQPVTEALSAYGVTVY 187 (187)
T ss_dssp EEEEECC----CCCTTCTTCEEE-----ET-TEEEEEEEEESCCB---------TTBCCCEEEEHHHHHHHHTCEEC
T ss_pred EEEEECC----CCCCCCCCCEEE-----EC-CEEEEEEEEECCCC---------CCCCCEEEEEHHHHHHHCCCEEC
T ss_conf 0697241----147998778688-----89-99999998617887---------77884699998998987596989
No 5
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=1.00 E-value=1 Score=132.33 Aligned_cols=170 Identities=19% Similarity=0.189 Sum_probs=114.3
Q ss_pred CCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 54011479998289984369913393002689877667899998328754589822331025401013322589986412
Q 007476 218 ETYGTLGAIVRSRTGNQQVGFLTNRHVAVDLDYPNQKMFHPLPPSLGPGVYLGAVERATSFITDDLWYGIFAGTNPETFV 297 (602)
Q Consensus 218 ~taGTLGcLV~D~~G~~~~yiLSNnHVla~~n~~~q~~~~pg~pIlQPG~~DGG~~r~~kfipl~~~~~i~~g~np~N~V 297 (602)
...||+|++|+|. ...|+|||+||....+. + .-|..++ .. .+.|
T Consensus 11 ~~~ct~G~~v~~~---~~~~vlTaaHc~~~~~~-----------~-~~G~~~~-----------~~--------~~~~-- 54 (181)
T 2sga_A 11 GSRCSLGFNVSVN---GVAHALTAGHCTNISAS-----------W-SIGTRTG-----------TS--------FPNN-- 54 (181)
T ss_dssp TEEEECCEEEEET---TEEEEEECHHHHTTCSE-----------E-TTEEEEE-----------EE--------CSBS--
T ss_pred CCCEECCEEEEEC---CCEEEEECCCCCCCCCC-----------E-EECCEEC-----------CC--------CCCC--
T ss_conf 9968100999979---90599988000889982-----------5-0065317-----------82--------8988--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCEEEEE
Q ss_conf 3552212344446888766543333435-850133046765534799099953025633899999999991899939998
Q 007476 298 RADGAFIPFAEDFNLNNVTTSVKGVGEI-GDVHIIDLQSPINSLIGRQVMKVGRSSGLTTGTVMAYALEYNDEKGICFFT 376 (602)
Q Consensus 298 DaD~AlI~~a~~~d~s~vs~~I~~iG~I-G~v~~vdlqg~~~p~iG~~V~KvGRTTGlT~G~I~ai~V~y~~~~G~~~F~ 376 (602)
|+|++++.++. ..+..|..++.- ..+. +...+..|+.|+|+|+++++|.|.|.++.+.+....+. .+.
T Consensus 55 --DiAlikl~~~~---~~~~~v~~i~~~~~~~~-----~~~~~~~G~~v~~~G~~~~~t~G~v~~~~~~v~~~~~~-~~~ 123 (181)
T 2sga_A 55 --DYGIIRHSNPA---AADGRVYLYNGSYQDIT-----TAGNAFVGQAVQRSGSTTGLRSGSVTGLNATVNYGSSG-IVY 123 (181)
T ss_dssp --CEEEEEESCGG---GCCCEEECSSSCEEECC-----EECCCCTTCEEEEEETTTEEEEEEEEEEEEEEECGGGC-EEE
T ss_pred --CEEEEECCCCC---CCCCEEEECCCCCEEEC-----CCCCCCCCCEEEEEECCCCCCEEEEEEEEEEEECCCCC-EEE
T ss_conf --79999816877---66665884378610021-----53468999989986658873279999868799889998-996
Q ss_pred EEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHHHCCCEEE
Q ss_conf 99997788888789998331479512489999239999704688765211138999531785625988875196698
Q 007476 377 DFLVVGENQQTFDLEGDSGSLILLTGQNGEKPRPVGIIWGGTANRGRLKLKVGQPPVNWTSGVDLGRLLDLLELDLI 453 (602)
Q Consensus 377 dqIIt~~~~~~FS~~GDSGSlVl~~~~~d~~~~~VGLlfGGs~~~gr~~~~~g~~p~~~Tl~npI~~VL~~L~V~Lv 453 (602)
+++.+.. ++.+||||+.++ +.+ +++|++++|...+ .....++|+||..+++.|+|+|+
T Consensus 124 ~~i~~~~----c~~~GDSGGPlv-----~~~-~~vGI~s~g~~~~---------~~~~~~v~~~v~~~~~~l~v~l~ 181 (181)
T 2sga_A 124 GMIQTNV----CAQPGDSGGSLF-----AGS-TALGLTSGGSGNC---------RTGGTTFYQPVTEALSAYGATVL 181 (181)
T ss_dssp EEEEESC----CCCTTCTTCEEE-----ETT-EEEEEEEEEEEET---------TTEEEEEEEEHHHHHHHHTEEEC
T ss_pred EEEECCC----CCCCCCCCCEEE-----ECC-EEEEEEEEECCCC---------CCCCCEEEEEHHHHHHHCCCEEC
T ss_conf 1596364----157888788788-----799-9999998617987---------67871189998998976392989
No 6
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=1.00 E-value=1 Score=124.94 Aligned_cols=173 Identities=22% Similarity=0.330 Sum_probs=115.4
Q ss_pred CCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 54011479998289984369913393002689877667899998328754589822331025401013322589986412
Q 007476 218 ETYGTLGAIVRSRTGNQQVGFLTNRHVAVDLDYPNQKMFHPLPPSLGPGVYLGAVERATSFITDDLWYGIFAGTNPETFV 297 (602)
Q Consensus 218 ~taGTLGcLV~D~~G~~~~yiLSNnHVla~~n~~~q~~~~pg~pIlQPG~~DGG~~r~~kfipl~~~~~i~~g~np~N~V 297 (602)
...+|.|+++++ |||||+||..... .+.. .|| +++.-++ |.+
T Consensus 14 ~~~CT~Gf~~~~-------~ilTa~Hc~~~~~-----------~v~~---~dg------~v~~~~~---------~~~-- 55 (189)
T 2ea3_A 14 RSRCSIGFAVNG-------GFITAGHCGRTGA-----------TTAN---PTG------TFAGSSF---------PGN-- 55 (189)
T ss_dssp EEEEECCEEETT-------EEEECGGGCCTTC-----------EEET---TTE------EEEEEEC---------SBS--
T ss_pred CCCCCCCEECCC-------EEEECHHCCCCCC-----------EEEE---CCC------EEEEECC---------CCC--
T ss_conf 997960888047-------4999610388999-----------7994---882------8996579---------999--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCEEEEEE
Q ss_conf 35522123444468887665433334358501330467655347990999530256338999999999918999399989
Q 007476 298 RADGAFIPFAEDFNLNNVTTSVKGVGEIGDVHIIDLQSPINSLIGRQVMKVGRSSGLTTGTVMAYALEYNDEKGICFFTD 377 (602)
Q Consensus 298 DaD~AlI~~a~~~d~s~vs~~I~~iG~IG~v~~vdlqg~~~p~iG~~V~KvGRTTGlT~G~I~ai~V~y~~~~G~~~F~d 377 (602)
|+|++++... ...++.|...+ |.+ +.+.+...+.+|+.|+|+|++||+|+|.|.++.....+..+ .+.+
T Consensus 56 --DiAlikl~~~---~~~~~~v~~~~--g~~--v~l~~s~~~~vG~~v~~~G~~tG~t~G~Vs~~~~~v~~~~~--~~~~ 124 (189)
T 2ea3_A 56 --DYAFVRTGAG---VNLLAQVNNYS--GGR--VQVAGHTAAPVGSAVCRSGSTTGWHCGTITALNSSVTYPEG--TVRG 124 (189)
T ss_dssp --CEEEEEECTT---CEEEEEEECSS--SCE--EECCBCCCCCTTCEEEEEETTTEEEEEEEEEEEEEEEETTE--EEEE
T ss_pred --CEEEEEECCC---CCCCCCEEECC--CCE--EECCCCCCCCCCCEEEEEEECCCCEEEEEEECCEEEEECCC--CCCC
T ss_conf --8999997897---75465167137--833--60488767999998999992886089999861318983894--1803
Q ss_pred EEEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHHHCCCEEEECCC
Q ss_conf 99977888887899983314795124899992399997046887652111389995317856259888751966980699
Q 007476 378 FLVVGENQQTFDLEGDSGSLILLTGQNGEKPRPVGIIWGGTANRGRLKLKVGQPPVNWTSGVDLGRLLDLLELDLIATNE 457 (602)
Q Consensus 378 qIIt~~~~~~FS~~GDSGSlVl~~~~~d~~~~~VGLlfGGs~~~gr~~~~~g~~p~~~Tl~npI~~VL~~L~V~LvT~~~ 457 (602)
++.+.. +..+||||+.++ . +++++|++.++...+ .....++|+||..+|+.|+|+|+|+..
T Consensus 125 ~~~~~~----~~~~GDSGgpl~-----~-~~~~vGi~s~~~~~c---------~~~~~~~~~pi~~~l~~~gv~l~t~~~ 185 (189)
T 2ea3_A 125 LIRTTV----CAEPGDSGGSLL-----A-GNQAQGVTSGGSGNC---------RTGGTTFFQPVNPILQAYGLRMITTDS 185 (189)
T ss_dssp EEEESC----CCCTTCTTCEEE-----E-TTEEEEEEEEEEEET---------TTEEEEEEEEHHHHHHHHTCCBCCC--
T ss_pred EEEEEE----ECCCCCCCCEEE-----E-CCEEEEEEEECCCCC---------CCCCCEEEEEHHHHHHHCCEEEEECCC
T ss_conf 487326----616888367289-----9-999999996247887---------888848999989989878949997899
Q ss_pred C
Q ss_conf 8
Q 007476 458 G 458 (602)
Q Consensus 458 g 458 (602)
.
T Consensus 186 ~ 186 (189)
T 2ea3_A 186 G 186 (189)
T ss_dssp -
T ss_pred C
T ss_conf 8
No 7
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=1.00 E-value=1 Score=108.33 Aligned_cols=174 Identities=21% Similarity=0.218 Sum_probs=112.0
Q ss_pred CCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 54011479998289984369913393002689877667899998328754589822331025401013322589986412
Q 007476 218 ETYGTLGAIVRSRTGNQQVGFLTNRHVAVDLDYPNQKMFHPLPPSLGPGVYLGAVERATSFITDDLWYGIFAGTNPETFV 297 (602)
Q Consensus 218 ~taGTLGcLV~D~~G~~~~yiLSNnHVla~~n~~~q~~~~pg~pIlQPG~~DGG~~r~~kfipl~~~~~i~~g~np~N~V 297 (602)
...+|+||+|++. ...|+|||+||....+.. .+ . .+...+...+. . . .+-
T Consensus 11 ~~~ct~Gf~v~~~---~~~~ilTaaHcv~~~~~~---------~v-~----~~~~~~~g~~~---~-------~---~~~ 60 (185)
T 2qa9_E 11 TGRCSLGFNVRSG---STYYFLTAGHCTDGATTW---------WA-N----SARTTVLGTTS---G-------S---SFP 60 (185)
T ss_dssp SCEEECCEEEEET---TEEEEEECHHHHTTCSEE---------ES-S----TTSCSEEEEEE---E-------E---ECS
T ss_pred CCCEECCEEEEEC---CCEEEEECCCCCCCCCCE---------EE-C----CCCCEEEEEEE---C-------C---CCC
T ss_conf 9838411899979---945999990407789858---------84-4----79834767774---6-------6---468
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCEEEEE
Q ss_conf 35522123444-46888766543333435850133046765534799099953025633899999999991899939998
Q 007476 298 RADGAFIPFAE-DFNLNNVTTSVKGVGEIGDVHIIDLQSPINSLIGRQVMKVGRSSGLTTGTVMAYALEYNDEKGICFFT 376 (602)
Q Consensus 298 DaD~AlI~~a~-~~d~s~vs~~I~~iG~IG~v~~vdlqg~~~p~iG~~V~KvGRTTGlT~G~I~ai~V~y~~~~G~~~F~ 376 (602)
+.|+||+++.+ ++.. +..+.. + . +.....+..|+.|+++|++++.+.|.+..+.+......+. ++.
T Consensus 61 ~~DiAll~l~~~~~~~---~~~v~~---~-~-----l~~~~~~~~g~~v~~~Gw~~~~~~g~l~~~~~~v~~~~~~-~~~ 127 (185)
T 2qa9_E 61 NNDYGIVRYTNTTIPK---DGTVGG---Q-D-----ITSAANATVGMAVTRRGSTTGTHSGSVTALNATVNYGGGD-VVY 127 (185)
T ss_dssp BSCEEEEEECCSSSCC---CCEETT---E-E-----CCEECCCCTTCEEEEEETTTEEEEEEEEEEEEEEECSTTC-EEE
T ss_pred CCCEEEEEECCCCCCC---CCCCCE---E-E-----ECCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEEECCCCC-EEE
T ss_conf 9989999806877444---674113---6-6-----0785668999889994278736676799977789728997-882
Q ss_pred EEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHHHCCCEEE
Q ss_conf 99997788888789998331479512489999239999704688765211138999531785625988875196698
Q 007476 377 DFLVVGENQQTFDLEGDSGSLILLTGQNGEKPRPVGIIWGGTANRGRLKLKVGQPPVNWTSGVDLGRLLDLLELDLI 453 (602)
Q Consensus 377 dqIIt~~~~~~FS~~GDSGSlVl~~~~~d~~~~~VGLlfGGs~~~gr~~~~~g~~p~~~Tl~npI~~VL~~L~V~Lv 453 (602)
+++.+.. ++.+||||+.++ +.+ +++|++++|...+ .+...++|.++..+++-++++|+
T Consensus 128 ~~~~~~~----cac~GDSGGPlv-----~~~-~~vGI~s~g~~~~---------~~~~p~vyt~v~~~~~wI~~~l~ 185 (185)
T 2qa9_E 128 GMIRTNV----CAEPGDSGGPLY-----SGT-RAIGLTSGGSGNC---------SSGGTTFFQPVTEALSAYGVSVY 185 (185)
T ss_dssp EEEEESC----CCCTTCTTCEEE-----ETT-EEEEEEEEEEEET---------TTEEEEEEEEHHHHHHHHTCEEC
T ss_pred CEEEECC----CCCCCCCCCEEE-----ECC-EEEEEEEECCCCC---------CCCCCEEEEEHHHHHHHHCCEEC
T ss_conf 4198366----079998564489-----988-8899998338887---------77872899998998986395989
No 8
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=68.73 Aligned_cols=162 Identities=13% Similarity=0.085 Sum_probs=92.4
Q ss_pred CEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 40114799982899843699133930026898776678999983287545898223310254010133225899864123
Q 007476 219 TYGTLGAIVRSRTGNQQVGFLTNRHVAVDLDYPNQKMFHPLPPSLGPGVYLGAVERATSFITDDLWYGIFAGTNPETFVR 298 (602)
Q Consensus 219 taGTLGcLV~D~~G~~~~yiLSNnHVla~~n~~~q~~~~pg~pIlQPG~~DGG~~r~~kfipl~~~~~i~~g~np~N~VD 298 (602)
..|| |+++.| + |||||+||+.+.... .+.-+ .|| ..-..+.+.. . .+
T Consensus 74 s~GS-GfiI~d---G---~IlTN~HVV~~a~~i---------~V~~~--~dg-~~~~A~vv~~----------D----~~ 120 (539)
T 4fln_A 74 STGS-AFMIGD---G---KLLTNAHCVEHDTQV---------KVKRR--GDD-RKYVAKVLVR----------G----VD 120 (539)
T ss_dssp EEEE-EEEEET---T---EEEECGGGGTTEEEE---------EEECT--TCC-CCEEEEEEEE----------E----TT
T ss_pred EEEE-EEEEEC---C---EEEECHHHCCCCCEE---------EEEEC--CCC-EEEEEEEEEE----------C----CC
T ss_conf 6799-999979---9---999786882899869---------99992--699-7999999997----------7----99
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCC-----CEEEEEEEEEEEEECCCCEE
Q ss_conf 5522123444468887665433334358501330467655347990999530256-----33899999999991899939
Q 007476 299 ADGAFIPFAEDFNLNNVTTSVKGVGEIGDVHIIDLQSPINSLIGRQVMKVGRSSG-----LTTGTVMAYALEYNDEKGIC 373 (602)
Q Consensus 299 aD~AlI~~a~~~d~s~vs~~I~~iG~IG~v~~vdlqg~~~p~iG~~V~KvGRTTG-----lT~G~I~ai~V~y~~~~G~~ 373 (602)
+|.|++++... ..+. .+.. + . --..+.+|+.|.-+|.--| .|.|.|.++...........
T Consensus 121 ~DLAvLkv~~~---~~~~-~~~p---l---~-----~g~~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~~~~~~ 185 (539)
T 4fln_A 121 CDIALLSVESE---DFWK-GAEP---L---R-----LGHLPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSD 185 (539)
T ss_dssp TTEEEEEECCS---SSST-TCCC---C---C-----BCCCCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECTTSCCE
T ss_pred CCEEEEEEECC---CCCC-CCCE---E---E-----CCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCC
T ss_conf 88899998077---6776-7845---4---2-----58867679969999868999987678479875644445788741
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHHHC
Q ss_conf 998999977888887899983314795124899992399997046887652111389995317856259888751
Q 007476 374 FFTDFLVVGENQQTFDLEGDSGSLILLTGQNGEKPRPVGIIWGGTANRGRLKLKVGQPPVNWTSGVDLGRLLDLL 448 (602)
Q Consensus 374 ~F~dqIIt~~~~~~FS~~GDSGSlVl~~~~~d~~~~~VGLlfGGs~~~gr~~~~~g~~p~~~Tl~npI~~VL~~L 448 (602)
...|.+.. --.+|.||+.++ |.++++||+.++.-... +..+..|+-|+..+...+
T Consensus 186 --~~~IQtDA----aInpGnSGGPLv-----n~~GeVIGIntai~~~~---------~~~gigfAIP~~~v~~vl 240 (539)
T 4fln_A 186 --LLGIQIDA----AINPGNSGGPAF-----NDQGECIGVAFQVYRSE---------ETENIGYVIPTTVVSHFL 240 (539)
T ss_dssp --EEEEEESS----CCCTTTTTSEEE-----CSSSCEEEEECCCC--------------CCCEEEEEHHHHHHHH
T ss_pred --EEEEEEEE----EECCCCCCCHHC-----CCCCCEEEEEEEEECCC---------CCCCCEECCCHHHHHHHH
T ss_conf --56999976----865998334400-----37996898998884378---------888630003199999999
No 9
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=1.00 E-value=1 Score=65.41 Aligned_cols=162 Identities=20% Similarity=0.212 Sum_probs=95.1
Q ss_pred EEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 79998289984369913393002689877667899998328754589822331025401013322589986412355221
Q 007476 224 GAIVRSRTGNQQVGFLTNRHVAVDLDYPNQKMFHPLPPSLGPGVYLGAVERATSFITDDLWYGIFAGTNPETFVRADGAF 303 (602)
Q Consensus 224 GcLV~D~~G~~~~yiLSNnHVla~~n~~~q~~~~pg~pIlQPG~~DGG~~r~~kfipl~~~~~i~~g~np~N~VDaD~Al 303 (602)
|.++... -|||||+||+.+.... ...+. ||.. .+.+.. . .. .+.|+|+
T Consensus 60 G~iI~~~-----g~ILTnaHvv~~~~~i--------~V~~~----~g~~------~~a~vv-~----~d----~~~DlAl 107 (239)
T 1l1j_A 60 GFIFDPE-----GYILTNYHVVGGADNI--------TVTML----DGSK------YDAEYI-G----GD----EELDIAV 107 (239)
T ss_dssp EEEEETT-----TEEEEEHHHHSSCSSC--------EEECT----TSCE------EEBCCC-E----EE----TTTTEEE
T ss_pred EEEEECC-----CEEEECHHHHCCCCEE--------EEEEC----CCCE------EEEEEE-E----EC----CCCCEEE
T ss_conf 9999089-----8999884883999779--------99989----9989------999999-9----82----8888899
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCC----CEEEEEEEEEEEEECCCCEEEEEEEE
Q ss_conf 23444468887665433334358501330467655347990999530256----33899999999991899939998999
Q 007476 304 IPFAEDFNLNNVTTSVKGVGEIGDVHIIDLQSPINSLIGRQVMKVGRSSG----LTTGTVMAYALEYNDEKGICFFTDFL 379 (602)
Q Consensus 304 I~~a~~~d~s~vs~~I~~iG~IG~v~~vdlqg~~~p~iG~~V~KvGRTTG----lT~G~I~ai~V~y~~~~G~~~F~dqI 379 (602)
+++..+. ..+ .. + . |.....+..|+.|.-+|.-.| +|.|.|.++.-.+....+...+.++|
T Consensus 108 lkl~~~~--~~~----~~---~---~---l~~s~~~~~G~~v~~iG~p~g~~~~vt~Givs~~~r~~~~~~~~~~~~~~i 172 (239)
T 1l1j_A 108 IKIKASD--KKF----PY---L---E---FGDSDKVKIGEWAIAIGNPLGFQHTVTVGVVSATNRRIPKPDGSGYYVGLI 172 (239)
T ss_dssp EEBCCSS--SCC----CC---C---E---ECCGGGCCTTCEEEEEECTTSSSCEEEEEEEEEEEEEEECTTSSCEEEEEE
T ss_pred EEECCCC--CCC----CE---E---E---ECCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEE
T ss_conf 9976777--887----46---9---8---547567842657999988888788387889920441235688766557899
Q ss_pred EECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHHHCCC
Q ss_conf 97788888789998331479512489999239999704688765211138999531785625988875196
Q 007476 380 VVGENQQTFDLEGDSGSLILLTGQNGEKPRPVGIIWGGTANRGRLKLKVGQPPVNWTSGVDLGRLLDLLEL 450 (602)
Q Consensus 380 It~~~~~~FS~~GDSGSlVl~~~~~d~~~~~VGLlfGGs~~~gr~~~~~g~~p~~~Tl~npI~~VL~~L~V 450 (602)
.+.. -..+||||+.++ +.++++||+..++... ++..+..++.|+..+...++-
T Consensus 173 ~tda----~i~~G~SGGPLv-----~~~G~vvGI~s~~~~~---------~~~~g~~faIP~~~~~~~~~~ 225 (239)
T 1l1j_A 173 QTDA----AINPGNSGGPLL-----NIHGEVIGINTAIVNP---------QEAVNLGFAIPINTVKKFLDT 225 (239)
T ss_dssp EESS----CCCTTTTTSEEE-----CSSSEEEEEECCCSCC---------CSCCSCEEEEEHHHHHHHHGG
T ss_pred EECC----CCCCCCCCHHHC-----CCCCEEEEEEEEEECC---------CCCCCEEEEEEHHHHHHHHHH
T ss_conf 9878----889987418812-----5998199999656168---------885756999999999999999
No 10
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=1.00 E-value=1 Score=65.09 Aligned_cols=158 Identities=20% Similarity=0.180 Sum_probs=91.0
Q ss_pred EEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 79998289984369913393002689877667899998328754589822331025401013322589986412355221
Q 007476 224 GAIVRSRTGNQQVGFLTNRHVAVDLDYPNQKMFHPLPPSLGPGVYLGAVERATSFITDDLWYGIFAGTNPETFVRADGAF 303 (602)
Q Consensus 224 GcLV~D~~G~~~~yiLSNnHVla~~n~~~q~~~~pg~pIlQPG~~DGG~~r~~kfipl~~~~~i~~g~np~N~VDaD~Al 303 (602)
|.++.... -|||||+||+.+.... ...+ .||. ..+.+.. . ..+ ..|+|+
T Consensus 67 Gfii~~~~----G~IlTn~Hvv~~a~~i--------~V~~----~dg~------~~~a~vv---~--~d~----~~DlAl 115 (436)
T 4a8c_A 67 GVIINASK----GYVLTNNHVINQAQKI--------SIQL----NDGR------EFDAKLI---G--SDD----QSDIAL 115 (436)
T ss_pred EEEEECCC----CEEEECHHHHCCCCEE--------EEEE----CCCC------EEEEEEE---E--ECC----CCCEEE
T ss_conf 99998998----9899887991999889--------9995----7998------9999999---9--748----889899
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCC----CEEEEEEEEEEE-EECCCCEEEEEEE
Q ss_conf 23444468887665433334358501330467655347990999530256----338999999999-9189993999899
Q 007476 304 IPFAEDFNLNNVTTSVKGVGEIGDVHIIDLQSPINSLIGRQVMKVGRSSG----LTTGTVMAYALE-YNDEKGICFFTDF 378 (602)
Q Consensus 304 I~~a~~~d~s~vs~~I~~iG~IG~v~~vdlqg~~~p~iG~~V~KvGRTTG----lT~G~I~ai~V~-y~~~~G~~~F~dq 378 (602)
+++... ..+ +.+ . + .....+..|+.|.-+|.--| .|.|.|.++.-. +.. ..+.++
T Consensus 116 lkv~~~---~~l-~~~-~---l--------~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~r~~~~~----~~~~~~ 175 (436)
T 4a8c_A 116 LQIQNP---SKL-TQI-A---I--------ADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNL----EGLENF 175 (436)
T ss_pred EEECCC---CCC-CEE-E---C--------CCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCC----CCCCCE
T ss_conf 993477---889-557-6---1--------6735477798899997678878627777996422465577----774687
Q ss_pred EEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHHHCC
Q ss_conf 99778888878999833147951248999923999970468876521113899953178562598887519
Q 007476 379 LVVGENQQTFDLEGDSGSLILLTGQNGEKPRPVGIIWGGTANRGRLKLKVGQPPVNWTSGVDLGRLLDLLE 449 (602)
Q Consensus 379 IIt~~~~~~FS~~GDSGSlVl~~~~~d~~~~~VGLlfGGs~~~gr~~~~~g~~p~~~Tl~npI~~VL~~L~ 449 (602)
|.+.. -..+|+||+.++ |.++++|||..+..... .+..+..++.|+..+...++
T Consensus 176 iq~da----~i~~GnSGGPl~-----n~~G~vvGI~~~~~~~~--------~~~~g~gfaIP~~~~~~~~~ 229 (436)
T 4a8c_A 176 IQTDA----SINRGNAGGALL-----NLNGELIGINTAILAPG--------GGSVGIGFAIPSNMARTLAQ 229 (436)
T ss_pred EEECC----CCCCCCCCCCCC-----CCCCEEEEEEEEECCCC--------CCCEEEEEEEEHHHHHHHHH
T ss_conf 99927----528988727602-----78977999971101688--------97235788886688999999
Done!