Query 007478
Match_columns 602
No_of_seqs 457 out of 3154
Neff 7.2
Searched_HMMs 29240
Date Tue Mar 26 18:28:17 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/007478.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2187-2191//hhsearch_pdb/007478hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 475.2 21.6 261 112-376 31-300 (311)
2 4fie_A Serine/threonine-protei 1.0 1 1 471.5 23.7 258 112-375 150-409 (423)
3 4b9d_A Serine/threonine-protei 1.0 1 1 468.6 21.5 260 110-373 21-283 (350)
4 4fih_A Serine/threonine-protei 1.0 1 1 467.3 22.2 258 112-375 73-332 (346)
5 3v5w_A G-protein coupled recep 1.0 1 1 460.0 27.1 265 110-377 186-460 (689)
6 3ubd_A Ribosomal protein S6 ki 1.0 1 1 458.0 17.3 260 111-375 22-290 (304)
7 3hyh_A Carbon catabolite-derep 1.0 1 1 455.4 21.6 258 112-373 12-269 (275)
8 4b99_A Mitogen-activated prote 1.0 1 1 455.1 27.9 263 111-376 52-354 (398)
9 4g3f_A NF-kappa-beta-inducing 1.0 1 1 449.8 18.9 254 111-374 56-330 (336)
10 3uto_A Twitchin; kinase, muscl 1.0 1 1 448.0 23.6 260 111-375 155-419 (573)
No 1
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=475.24 Aligned_cols=261 Identities=28% Similarity=0.491 Sum_probs=234.1
Q ss_pred CCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCHHCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEE
Q ss_conf 99924730683329759999999799947999998416410019999999999999982699957887054123455999
Q 007478 112 ESHWKKGKMLGRGTFGHVYVGFNSDSGEMCAMKEVTLFDDAKSKESAKQLMQEIVLLSRLRHPNIVQYYGSKTVEDKLYI 191 (602)
Q Consensus 112 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~i~~~~~~~~~~~~~~l~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~l 191 (602)
.++|++++.||+|+||+||+|+++.+++.||+|++.+... ......+.+.+|+.+|+.++|||||++++++++++.+||
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi 109 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF 109 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC-CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE
T ss_conf 5236898898316484999999999998999999888887-797899999999999986799898919999973898999
Q ss_pred EEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCCCEEEECCCCCCCCCCCC---
Q ss_conf 99640377723552203899967898989999977763203890304787870898359956781158530024889---
Q 007478 192 YLEYVSGGSIYKLLQDYGQFGEPAIRNYTQQILSGLAFLHSKHTVHRDIKGANILVDPNGRVKLADFGMAKHIAGQS--- 268 (602)
Q Consensus 192 V~E~~~ggsL~~~l~~~~~ls~~~i~~i~~qIl~gL~yLH~~gIvHrDLKp~NILl~~~g~iKL~DFGla~~~~~~~--- 268 (602)
|||||+||+|++++.+.+.+++..++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.+....
T Consensus 110 vmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~ 189 (311)
T 4aw0_A 110 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 189 (311)
T ss_dssp EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCC
T ss_pred EEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCCCCCC
T ss_conf 99648998999999874999999999999999999999998878268787899698589888998768750257787765
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 88655799898982000146999943310225668999850999999803699999840889999999989988999999
Q 007478 269 CPLSFKGSPYWMAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIR 348 (602)
Q Consensus 269 ~~~~~~GT~~Y~APE~l~~~~~~s~~sDIWSlGviLyeLltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~s~~l~~Li~ 348 (602)
...+++||+.|||||++.+.. |+.++|||||||++|||++|++||.+.+....+.++.... ..+|..+++++++||.
T Consensus 190 ~~~~~~GTp~YmAPEvl~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~--~~~p~~~s~~~~dli~ 266 (311)
T 4aw0_A 190 RANSFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE--YDFPEKFFPKARDLVE 266 (311)
T ss_dssp CBCCCCSCGGGCCHHHHHHSC-BCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--CCCCTTCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC--CCCCCCCCHHHHHHHH
T ss_conf 436755680307998976899-9968989989999999974989989979999999997199--9999656999999999
Q ss_pred HHCCCCCCCCCCHHH------HHCCCCCCCCCCC
Q ss_conf 970349999999999------9629355698721
Q 007478 349 LCLQRNPLNRPTAAE------LLDHPFVKGAAPL 376 (602)
Q Consensus 349 ~~L~~dP~~Rps~~e------iL~hp~f~~~~~~ 376 (602)
+||++||++|+|++| |++||||++..|.
T Consensus 267 ~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~ 300 (311)
T 4aw0_A 267 KLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 300 (311)
T ss_dssp HHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCT
T ss_pred HHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCCHH
T ss_conf 9762897578096797587798779875898989
No 2
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=471.47 Aligned_cols=258 Identities=34% Similarity=0.585 Sum_probs=229.2
Q ss_pred CCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCHHCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEE
Q ss_conf 99924730683329759999999799947999998416410019999999999999982699957887054123455999
Q 007478 112 ESHWKKGKMLGRGTFGHVYVGFNSDSGEMCAMKEVTLFDDAKSKESAKQLMQEIVLLSRLRHPNIVQYYGSKTVEDKLYI 191 (602)
Q Consensus 112 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~i~~~~~~~~~~~~~~l~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~l 191 (602)
.+.|++.+.||+|+||.||+|+++.+|+.||||++.+.... ..+.+.+|+.+|+.++|||||++++++.+.+.+||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~i 225 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV 225 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS----SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHH----HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEE
T ss_conf 68438616962481848999999999989999998625546----89999999999985799898716899998999999
Q ss_pred EEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCCCEEEECCCCCCCCCCC-CCC
Q ss_conf 9964037772355220389996789898999997776320389030478787089835995678115853002488-988
Q 007478 192 YLEYVSGGSIYKLLQDYGQFGEPAIRNYTQQILSGLAFLHSKHTVHRDIKGANILVDPNGRVKLADFGMAKHIAGQ-SCP 270 (602)
Q Consensus 192 V~E~~~ggsL~~~l~~~~~ls~~~i~~i~~qIl~gL~yLH~~gIvHrDLKp~NILl~~~g~iKL~DFGla~~~~~~-~~~ 270 (602)
|||||+||+|.++++. +.+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+|+.+... ...
T Consensus 226 VmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 304 (423)
T 4fie_A 226 VMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 304 (423)
T ss_dssp EEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCB
T ss_pred EEECCCCCCHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEECCCCCEECCCCCCCC
T ss_conf 9969899828988761-698999999999999999999998890446578777898589998980372654777887643
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC-CCCCCCCCCHHHHHHHHH
Q ss_conf 6557998989820001469999433102256689998509999998036999998408899-999999899889999999
Q 007478 271 LSFKGSPYWMAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRL 349 (602)
Q Consensus 271 ~~~~GT~~Y~APE~l~~~~~~s~~sDIWSlGviLyeLltG~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~s~~l~~Li~~ 349 (602)
.+.+||++|||||++.+.. |+.++|||||||++|||++|++||.+.+....+..+..... ....+..+++++++||.+
T Consensus 305 ~~~~GTp~YmAPEvl~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp CCCEECTTTCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 4666474727999977999-996899999999999999787998986999999999727998876501299999999999
Q ss_pred HCCCCCCCCCCHHHHHCCCCCCCCCC
Q ss_conf 70349999999999962935569872
Q 007478 350 CLQRNPLNRPTAAELLDHPFVKGAAP 375 (602)
Q Consensus 350 ~L~~dP~~Rps~~eiL~hp~f~~~~~ 375 (602)
||++||++|+|+.|+|+||||+....
T Consensus 384 ~L~~dP~~R~ta~ell~Hp~~~~~~~ 409 (423)
T 4fie_A 384 LLVRDPAQRATAAELLKHPFLAKAGP 409 (423)
T ss_dssp HSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HCCCCHHHCCCHHHHHCCHHHCCCCC
T ss_conf 86789568909999960987568999
No 3
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=468.55 Aligned_cols=260 Identities=28% Similarity=0.545 Sum_probs=232.0
Q ss_pred CCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCHHCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEE
Q ss_conf 99999247306833297599999997999479999984164100199999999999999826999578870541234559
Q 007478 110 SPESHWKKGKMLGRGTFGHVYVGFNSDSGEMCAMKEVTLFDDAKSKESAKQLMQEIVLLSRLRHPNIVQYYGSKTVEDKL 189 (602)
Q Consensus 110 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~i~~~~~~~~~~~~~~l~~Ei~iL~~l~HpnIv~l~g~~~~~~~~ 189 (602)
...++|++.+.||+|+||+||+|+++.+|+.||||++.+... .....+.+.+|+.+|+.++|||||++++++++++.+
T Consensus 21 ~sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~ 98 (350)
T 4b9d_A 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM--SSKEREESRREVAVLANMKHPNIVQYRESFEENGSL 98 (350)
T ss_dssp SCCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC--CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEE
T ss_conf 851255884797027793999999889998999999865878--979999999999999877998989199999989999
Q ss_pred EEEEEEECCCCHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCCCEEEECCCCCCCCCCC
Q ss_conf 9999640377723552203--89996789898999997776320389030478787089835995678115853002488
Q 007478 190 YIYLEYVSGGSIYKLLQDY--GQFGEPAIRNYTQQILSGLAFLHSKHTVHRDIKGANILVDPNGRVKLADFGMAKHIAGQ 267 (602)
Q Consensus 190 ~lV~E~~~ggsL~~~l~~~--~~ls~~~i~~i~~qIl~gL~yLH~~gIvHrDLKp~NILl~~~g~iKL~DFGla~~~~~~ 267 (602)
|||||||+||+|+++|... ..+++..++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.+...
T Consensus 99 yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 99 YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp EEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred EEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEECCCCCCEEECCC
T ss_conf 99994889983999999738999978999999999999999999899151359789979878999897646521440688
Q ss_pred C-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf 9-886557998989820001469999433102256689998509999998036999998408899999999899889999
Q 007478 268 S-CPLSFKGSPYWMAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDF 346 (602)
Q Consensus 268 ~-~~~~~~GT~~Y~APE~l~~~~~~s~~sDIWSlGviLyeLltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~s~~l~~L 346 (602)
. ...+.+||+.|||||++.+.. |+.++|||||||+||||++|++||.+.+....+.++.... .+.++..+++++++|
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~-y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~-~~~~~~~~s~~~~~l 256 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKP-YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS-FPPVSLHYSYDLRSL 256 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC-CCCCCTTSCHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC-CCCCCCCCCHHHHHH
T ss_conf 54101457883603999987999-8959999999999999997879989969999999998089-999975579999999
Q ss_pred HHHHCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 999703499999999999629355698
Q 007478 347 IRLCLQRNPLNRPTAAELLDHPFVKGA 373 (602)
Q Consensus 347 i~~~L~~dP~~Rps~~eiL~hp~f~~~ 373 (602)
|.+||++||++|||+.|+|+||||+..
T Consensus 257 i~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 257 VSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHCCCCHHHCCCHHHHHCCHHHHCC
T ss_conf 999855896679089999639976167
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=467.31 Aligned_cols=258 Identities=34% Similarity=0.585 Sum_probs=228.7
Q ss_pred CCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCHHCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEE
Q ss_conf 99924730683329759999999799947999998416410019999999999999982699957887054123455999
Q 007478 112 ESHWKKGKMLGRGTFGHVYVGFNSDSGEMCAMKEVTLFDDAKSKESAKQLMQEIVLLSRLRHPNIVQYYGSKTVEDKLYI 191 (602)
Q Consensus 112 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~i~~~~~~~~~~~~~~l~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~l 191 (602)
.+.|++.+.||+|+||+||+|+++.+|+.||||++++.... ..+.+.+|+.+|+.++|||||++++++.+++.+||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~i 148 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV 148 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS----SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHH----HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEE
T ss_conf 57538707960272829999999899989999998527656----89999999999986799899919999998999999
Q ss_pred EEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCCCEEEECCCCCCCCCCC-CCC
Q ss_conf 9964037772355220389996789898999997776320389030478787089835995678115853002488-988
Q 007478 192 YLEYVSGGSIYKLLQDYGQFGEPAIRNYTQQILSGLAFLHSKHTVHRDIKGANILVDPNGRVKLADFGMAKHIAGQ-SCP 270 (602)
Q Consensus 192 V~E~~~ggsL~~~l~~~~~ls~~~i~~i~~qIl~gL~yLH~~gIvHrDLKp~NILl~~~g~iKL~DFGla~~~~~~-~~~ 270 (602)
|||||+||+|.+++.+ +.+++..++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.+... ...
T Consensus 149 vmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 227 (346)
T 4fih_A 149 VMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 227 (346)
T ss_dssp EECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB
T ss_pred EEECCCCCCHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEECCCCCEECCCCCCCC
T ss_conf 9969899808999871-898999999999999999999998883556278899788799988990275753667887753
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC-CCCCCCCCCHHHHHHHHH
Q ss_conf 6557998989820001469999433102256689998509999998036999998408899-999999899889999999
Q 007478 271 LSFKGSPYWMAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDEGKDFIRL 349 (602)
Q Consensus 271 ~~~~GT~~Y~APE~l~~~~~~s~~sDIWSlGviLyeLltG~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~s~~l~~Li~~ 349 (602)
.+.+||+.|||||++.+.. |+.++|||||||++|||++|++||.+.+....+..+..... ....+..+++++++||.+
T Consensus 228 ~~~~GTp~YmAPEvl~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 306 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 306 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 4656275827999977999-996899999999999999787998985999999999717999887502299999999999
Q ss_pred HCCCCCCCCCCHHHHHCCCCCCCCCC
Q ss_conf 70349999999999962935569872
Q 007478 350 CLQRNPLNRPTAAELLDHPFVKGAAP 375 (602)
Q Consensus 350 ~L~~dP~~Rps~~eiL~hp~f~~~~~ 375 (602)
||++||++|||+.|+|+||||+...+
T Consensus 307 ~L~~dP~~R~ta~e~l~Hp~~~~~~~ 332 (346)
T 4fih_A 307 LLVRDPAQRATAAELLKHPFLAKAGP 332 (346)
T ss_dssp HSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HCCCCHHHCCCHHHHHCCHHHCCCCC
T ss_conf 86799568909999960986568999
No 5
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=460.01 Aligned_cols=265 Identities=28% Similarity=0.416 Sum_probs=228.0
Q ss_pred CCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCC--HHCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf 999992473068332975999999979994799999841641--001999999999999998269995788705412345
Q 007478 110 SPESHWKKGKMLGRGTFGHVYVGFNSDSGEMCAMKEVTLFDD--AKSKESAKQLMQEIVLLSRLRHPNIVQYYGSKTVED 187 (602)
Q Consensus 110 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~i~~~~~--~~~~~~~~~l~~Ei~iL~~l~HpnIv~l~g~~~~~~ 187 (602)
...++|+++++||+|+||+||+|+++.+|+.||+|++.+... ............++.+++.++|||||++++++.+.+
T Consensus 186 ~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~ 265 (689)
T 3v5w_A 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 265 (689)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred CCHHHEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC
T ss_conf 95689288889831648399999999999899999975788252556899999999999996489998717999999899
Q ss_pred EEEEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCCCEEEECCCCCCCCCCC
Q ss_conf 59999964037772355220389996789898999997776320389030478787089835995678115853002488
Q 007478 188 KLYIYLEYVSGGSIYKLLQDYGQFGEPAIRNYTQQILSGLAFLHSKHTVHRDIKGANILVDPNGRVKLADFGMAKHIAGQ 267 (602)
Q Consensus 188 ~~~lV~E~~~ggsL~~~l~~~~~ls~~~i~~i~~qIl~gL~yLH~~gIvHrDLKp~NILl~~~g~iKL~DFGla~~~~~~ 267 (602)
.+|||||||.||+|+++|.+.+.+++..++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|+.+...
T Consensus 266 ~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 266 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp EEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEECCCCEEEECCCC
T ss_conf 88999946899829999986699999999999999999999999788541688668759808998896456556663789
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH---HHHHHHHHCCCCCCCCCCCCCHHHH
Q ss_conf 9886557998989820001469999433102256689998509999998036---9999984088999999998998899
Q 007478 268 SCPLSFKGSPYWMAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEG---VAAMFKIGNSKELPTIPDDLSDEGK 344 (602)
Q Consensus 268 ~~~~~~~GT~~Y~APE~l~~~~~~s~~sDIWSlGviLyeLltG~~Pf~~~~~---~~~~~~i~~~~~~~~~p~~~s~~l~ 344 (602)
. ..+.+||+.|||||++....+|+.++|||||||+||||++|++||.+.+. ......+.. ....+|..++++++
T Consensus 346 ~-~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~--~~~~~p~~~S~~a~ 422 (689)
T 3v5w_A 346 K-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--MAVELPDSFSPELR 422 (689)
T ss_dssp C-CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHH--CCCCCCTTSCHHHH
T ss_pred C-CCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC--CCCCCCCCCCHHHH
T ss_conf 8-77765786731889984799999599999999999999868799999986779999985057--98888766999999
Q ss_pred HHHHHHCCCCCCCCCC-----HHHHHCCCCCCCCCCCC
Q ss_conf 9999970349999999-----99996293556987210
Q 007478 345 DFIRLCLQRNPLNRPT-----AAELLDHPFVKGAAPLE 377 (602)
Q Consensus 345 ~Li~~~L~~dP~~Rps-----~~eiL~hp~f~~~~~~~ 377 (602)
+||.+||++||.+|++ +++|++||||++..|..
T Consensus 423 dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~ 460 (689)
T 3v5w_A 423 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQM 460 (689)
T ss_dssp HHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHH
T ss_pred HHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHH
T ss_conf 99999760898687999888999996691504789889
No 6
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=457.99 Aligned_cols=260 Identities=30% Similarity=0.474 Sum_probs=230.4
Q ss_pred CCCCCEEEEEEEECCCEEEEEEEEC---CCCCEEEEEEEECCCCHHCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf 9999247306833297599999997---9994799999841641001999999999999998269995788705412345
Q 007478 111 PESHWKKGKMLGRGTFGHVYVGFNS---DSGEMCAMKEVTLFDDAKSKESAKQLMQEIVLLSRLRHPNIVQYYGSKTVED 187 (602)
Q Consensus 111 ~~~~y~~~~~LG~G~fG~Vy~a~~~---~tg~~vAvK~i~~~~~~~~~~~~~~l~~Ei~iL~~l~HpnIv~l~g~~~~~~ 187 (602)
..++|++.+.||+|+||+||+|++. .+++.||+|++++...... ....+.+|+.+|++++|||||++++++.+++
T Consensus 22 ~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 99 (304)
T 3ubd_A 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR--DRVRTKMERDILVEVNHPFIVKLHYAFQTEG 99 (304)
T ss_dssp CGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE--ECC------CCCCCCCCTTEECEEEEEEETT
T ss_pred CCCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHH--HHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
T ss_conf 95565898897218883999999855887897999999815776847--8999999999998779979990999999899
Q ss_pred EEEEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCCCEEEECCCCCCCCCC-
Q ss_conf 5999996403777235522038999678989899999777632038903047878708983599567811585300248-
Q 007478 188 KLYIYLEYVSGGSIYKLLQDYGQFGEPAIRNYTQQILSGLAFLHSKHTVHRDIKGANILVDPNGRVKLADFGMAKHIAG- 266 (602)
Q Consensus 188 ~~~lV~E~~~ggsL~~~l~~~~~ls~~~i~~i~~qIl~gL~yLH~~gIvHrDLKp~NILl~~~g~iKL~DFGla~~~~~- 266 (602)
.+|||||||+||+|.+++.+.+.+++..++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus 100 ~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 100 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCCCEECCCC
T ss_conf 99999975799888999975599999999999999999999999779958888789957868998876236634332688
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf 89886557998989820001469999433102256689998509999998036999998408899999999899889999
Q 007478 267 QSCPLSFKGSPYWMAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDF 346 (602)
Q Consensus 267 ~~~~~~~~GT~~Y~APE~l~~~~~~s~~sDIWSlGviLyeLltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~s~~l~~L 346 (602)
.....+.+||+.|||||++.+.. |+.++|||||||++|||++|++||.+.+....+.++.... ..+|..+++++++|
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~-y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~l 256 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRG-HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--LGMPQFLSPEAQSL 256 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHCCCC-CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC--CCCCCCCCHHHHHH
T ss_conf 76304544181507999965688-7877763611999999985989989849999999997189--99987689999999
Q ss_pred HHHHCCCCCCCCCC-----HHHHHCCCCCCCCCC
Q ss_conf 99970349999999-----999962935569872
Q 007478 347 IRLCLQRNPLNRPT-----AAELLDHPFVKGAAP 375 (602)
Q Consensus 347 i~~~L~~dP~~Rps-----~~eiL~hp~f~~~~~ 375 (602)
|.+||++||++|+| ++|+++||||++..|
T Consensus 257 i~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw 290 (304)
T 3ubd_A 257 LRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDW 290 (304)
T ss_dssp HHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred HHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCH
T ss_conf 9998646987879998678999976904037899
No 7
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=455.36 Aligned_cols=258 Identities=29% Similarity=0.485 Sum_probs=232.3
Q ss_pred CCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCHHCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEE
Q ss_conf 99924730683329759999999799947999998416410019999999999999982699957887054123455999
Q 007478 112 ESHWKKGKMLGRGTFGHVYVGFNSDSGEMCAMKEVTLFDDAKSKESAKQLMQEIVLLSRLRHPNIVQYYGSKTVEDKLYI 191 (602)
Q Consensus 112 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~i~~~~~~~~~~~~~~l~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~l 191 (602)
..+|++.+.||+|+||+||+|+++.+++.||+|++.+... ........+.+|+.+|+.++|||||++++++.+++.+|+
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 90 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVL-AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred EECEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC-CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE
T ss_conf 3386899998217681999999999998999999837886-787899999999999987799899929999998998999
Q ss_pred EEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 99640377723552203899967898989999977763203890304787870898359956781158530024889886
Q 007478 192 YLEYVSGGSIYKLLQDYGQFGEPAIRNYTQQILSGLAFLHSKHTVHRDIKGANILVDPNGRVKLADFGMAKHIAGQSCPL 271 (602)
Q Consensus 192 V~E~~~ggsL~~~l~~~~~ls~~~i~~i~~qIl~gL~yLH~~gIvHrDLKp~NILl~~~g~iKL~DFGla~~~~~~~~~~ 271 (602)
||||| +|+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.........
T Consensus 91 vmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~ 169 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK 169 (275)
T ss_dssp EEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred EEECC-CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCCCCCC
T ss_conf 99278-99789999874999999999999999999999998893066687587688799989994547772667887467
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 55799898982000146999943310225668999850999999803699999840889999999989988999999970
Q 007478 272 SFKGSPYWMAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDDLSDEGKDFIRLCL 351 (602)
Q Consensus 272 ~~~GT~~Y~APE~l~~~~~~s~~sDIWSlGviLyeLltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~s~~l~~Li~~~L 351 (602)
+.+||+.|||||++.+..+++.++||||+||++|||++|++||.+.+....+..+... ...+|..+++++++||.+||
T Consensus 170 ~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L 247 (275)
T 3hyh_A 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG--VYTLPKFLSPGAAGLIKRML 247 (275)
T ss_dssp -----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCCCTTSCHHHHHHHHHHS
T ss_pred CEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC--CCCCCCCCCHHHHHHHHHHC
T ss_conf 7028935277455068988898365687899999999887998998999999999749--99998779999999999986
Q ss_pred CCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 3499999999999629355698
Q 007478 352 QRNPLNRPTAAELLDHPFVKGA 373 (602)
Q Consensus 352 ~~dP~~Rps~~eiL~hp~f~~~ 373 (602)
++||++|||+.|+++||||+..
T Consensus 248 ~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 248 IVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp CSSGGGSCCHHHHHHCHHHHTT
T ss_pred CCCHHHCCCHHHHHCCCCCCCC
T ss_conf 5896689199999719200658
No 8
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=455.14 Aligned_cols=263 Identities=23% Similarity=0.397 Sum_probs=226.5
Q ss_pred CCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCHHCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC-----
Q ss_conf 999924730683329759999999799947999998416410019999999999999982699957887054123-----
Q 007478 111 PESHWKKGKMLGRGTFGHVYVGFNSDSGEMCAMKEVTLFDDAKSKESAKQLMQEIVLLSRLRHPNIVQYYGSKTV----- 185 (602)
Q Consensus 111 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~i~~~~~~~~~~~~~~l~~Ei~iL~~l~HpnIv~l~g~~~~----- 185 (602)
..++|++++.||+|+||+||+|+++.+|+.||||+++.. .......+.+.+|+.+|+.++|||||++++++..
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~--~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 129 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA--FDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG 129 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTT--TSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTT
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCC--CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
T ss_conf 789748988984260849999999899989999998740--034688999999999998667999541765552035546
Q ss_pred -CCEEEEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCCCEEEECCCCCCCC
Q ss_conf -4559999964037772355220389996789898999997776320389030478787089835995678115853002
Q 007478 186 -EDKLYIYLEYVSGGSIYKLLQDYGQFGEPAIRNYTQQILSGLAFLHSKHTVHRDIKGANILVDPNGRVKLADFGMAKHI 264 (602)
Q Consensus 186 -~~~~~lV~E~~~ggsL~~~l~~~~~ls~~~i~~i~~qIl~gL~yLH~~gIvHrDLKp~NILl~~~g~iKL~DFGla~~~ 264 (602)
.+.+|||||||+ |+|++++...+.+++..++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.+
T Consensus 130 ~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 130 EFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp TCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred CCCEEEEEEECCC-CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEC
T ss_conf 6887999983799-988999986599999999999999999999999886767873713354278887787221434213
Q ss_pred CCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC-----
Q ss_conf 488-----9886557998989820001469999433102256689998509999998036999998408899999-----
Q 007478 265 AGQ-----SCPLSFKGSPYWMAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPT----- 334 (602)
Q Consensus 265 ~~~-----~~~~~~~GT~~Y~APE~l~~~~~~s~~sDIWSlGviLyeLltG~~Pf~~~~~~~~~~~i~~~~~~~~----- 334 (602)
... ....+.+||++|||||++.+..+++.++||||+|||+|||++|++||.+.+....+..|......+.
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~ 288 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred CCCCCCCCCCCCCCEECHHHCCHHHHCCCCCCCCHHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
T ss_conf 46754566665662558676487876278889972221116899999997889989889899999999703899867763
Q ss_pred ------------------------CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCC
Q ss_conf ------------------------999899889999999703499999999999629355698721
Q 007478 335 ------------------------IPDDLSDEGKDFIRLCLQRNPLNRPTAAELLDHPFVKGAAPL 376 (602)
Q Consensus 335 ------------------------~p~~~s~~l~~Li~~~L~~dP~~Rps~~eiL~hp~f~~~~~~ 376 (602)
+...+++++++||.+||++||++|+|+.|+|+||||+.....
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~p 354 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDP 354 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCCG
T ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCCC
T ss_conf 310023455553078768878898587999999999999774995579189999659723868897
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=449.83 Aligned_cols=254 Identities=31% Similarity=0.510 Sum_probs=221.1
Q ss_pred CCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCHHCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEE
Q ss_conf 99992473068332975999999979994799999841641001999999999999998269995788705412345599
Q 007478 111 PESHWKKGKMLGRGTFGHVYVGFNSDSGEMCAMKEVTLFDDAKSKESAKQLMQEIVLLSRLRHPNIVQYYGSKTVEDKLY 190 (602)
Q Consensus 111 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~i~~~~~~~~~~~~~~l~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~ 190 (602)
..+.|++.+.||+|+||+||+|+++.+|+.||||++++... ..+|+.+|+.++|||||++++++.+.+.+|
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ 126 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGLSSPRIVPLYGAVREGPWVN 126 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTCCCTTBCCEEEEEEETTEEE
T ss_pred CHHHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHH---------HHHHHHHHHHCCCCCCCCEEEEEEECCEEE
T ss_conf 53351768685138780999999889998999999788886---------999999998579989993999999899999
Q ss_pred EEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCC-CEEEECCCCCCCCCCCCC
Q ss_conf 9996403777235522038999678989899999777632038903047878708983599-567811585300248898
Q 007478 191 IYLEYVSGGSIYKLLQDYGQFGEPAIRNYTQQILSGLAFLHSKHTVHRDIKGANILVDPNG-RVKLADFGMAKHIAGQSC 269 (602)
Q Consensus 191 lV~E~~~ggsL~~~l~~~~~ls~~~i~~i~~qIl~gL~yLH~~gIvHrDLKp~NILl~~~g-~iKL~DFGla~~~~~~~~ 269 (602)
||||||+||+|.++|++.+.+++..++.|+.||+.||+|||+++|+||||||+|||++.++ ++||+|||+|+.+.....
T Consensus 127 ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 127 IFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp EEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred EEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEECCCCEEEEEECCCCEECCCCCC
T ss_conf 99966599869999987699999999999999999999999889042616778879958999799962787768567876
Q ss_pred ------CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC-CCCCCCCCCHH
Q ss_conf ------86557998989820001469999433102256689998509999998036999998408899-99999989988
Q 007478 270 ------PLSFKGSPYWMAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKE-LPTIPDDLSDE 342 (602)
Q Consensus 270 ------~~~~~GT~~Y~APE~l~~~~~~s~~sDIWSlGviLyeLltG~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~s~~ 342 (602)
...++||+.|||||++.+.. |+.++|||||||++|||++|++||.+......+.++..... ...++..++++
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~-y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~ 285 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPL 285 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHH
T ss_pred CCCEECCCCCCCCCCCCCHHHHCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCHH
T ss_conf 54022178545580200899988999-89089999999999999978699899899999999980899800258667999
Q ss_pred HHHHHHHHCCCCCCCCCCHHHH-------------HCCCCCCCCC
Q ss_conf 9999999703499999999999-------------6293556987
Q 007478 343 GKDFIRLCLQRNPLNRPTAAEL-------------LDHPFVKGAA 374 (602)
Q Consensus 343 l~~Li~~~L~~dP~~Rps~~ei-------------L~hp~f~~~~ 374 (602)
+++||.+||++||++|||+.|+ ++|||+....
T Consensus 286 ~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~ 330 (336)
T 4g3f_A 286 TAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYK 330 (336)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCC
T ss_pred HHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999999976289768959999999999997544321698767778
No 10
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=1.00 E-value=1 Score=448.01 Aligned_cols=260 Identities=25% Similarity=0.432 Sum_probs=232.8
Q ss_pred CCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCHHCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEE
Q ss_conf 99992473068332975999999979994799999841641001999999999999998269995788705412345599
Q 007478 111 PESHWKKGKMLGRGTFGHVYVGFNSDSGEMCAMKEVTLFDDAKSKESAKQLMQEIVLLSRLRHPNIVQYYGSKTVEDKLY 190 (602)
Q Consensus 111 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~i~~~~~~~~~~~~~~l~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~ 190 (602)
..++|++++.||+|+||+||+|+++.+|+.||+|++... .....+.+.+|+.+|+.++|||||++++++.+.+.+|
T Consensus 155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~----~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~ 230 (573)
T 3uto_A 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP----HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMV 230 (573)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEE
T ss_pred CCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECC----CHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEE
T ss_conf 853618988996164849999999889989999999152----4205999999999998689989894999999899889
Q ss_pred EEEEEECCCCHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCC--CCEEEECCCCCCCCCCC
Q ss_conf 99964037772355220-3899967898989999977763203890304787870898359--95678115853002488
Q 007478 191 IYLEYVSGGSIYKLLQD-YGQFGEPAIRNYTQQILSGLAFLHSKHTVHRDIKGANILVDPN--GRVKLADFGMAKHIAGQ 267 (602)
Q Consensus 191 lV~E~~~ggsL~~~l~~-~~~ls~~~i~~i~~qIl~gL~yLH~~gIvHrDLKp~NILl~~~--g~iKL~DFGla~~~~~~ 267 (602)
||||||.||+|+++|.. .+.+++.+++.|+.||+.||+|||+++|+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 231 iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~ 310 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310 (573)
T ss_dssp EEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred EEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEEEEECCCEEECCCC
T ss_conf 99860699959999998679999999999999999999999988923056876551214788897899406630685699
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC--CCCCCCCCHHHHH
Q ss_conf 98865579989898200014699994331022566899985099999980369999984088999--9999989988999
Q 007478 268 SCPLSFKGSPYWMAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKEL--PTIPDDLSDEGKD 345 (602)
Q Consensus 268 ~~~~~~~GT~~Y~APE~l~~~~~~s~~sDIWSlGviLyeLltG~~Pf~~~~~~~~~~~i~~~~~~--~~~p~~~s~~l~~ 345 (602)
......+||+.|||||++.+.. |+.++|||||||++|||++|++||.+.+....+..+...... ...+..+++++++
T Consensus 311 ~~~~~~~GT~~y~APEv~~~~~-y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~d 389 (573)
T 3uto_A 311 QSVKVTTGTAEFAAPEVAEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 389 (573)
T ss_dssp SEEEEECSSGGGCCHHHHTTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHH
T ss_pred CCEEEEEECCCCCCHHHHCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf 8232347794514999968999-896999999999999999787997986999999999848999895324689999999
Q ss_pred HHHHHCCCCCCCCCCHHHHHCCCCCCCCCC
Q ss_conf 999970349999999999962935569872
Q 007478 346 FIRLCLQRNPLNRPTAAELLDHPFVKGAAP 375 (602)
Q Consensus 346 Li~~~L~~dP~~Rps~~eiL~hp~f~~~~~ 375 (602)
||++||++||++|||+.|+|+||||+...+
T Consensus 390 li~~~L~~dp~~R~t~~e~l~Hpw~~~~~~ 419 (573)
T 3uto_A 390 FIRKLLLADPNTRMTIHQALEHPWLTPGNA 419 (573)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred HHHHHCCCCHHHCCCHHHHHCCCCCCCCCC
T ss_conf 999886489568929999953957487989
Done!