Query 007482
Match_columns 602
No_of_seqs 344 out of 2981
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 02:48:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007482.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007482hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mwd_B ATP-citrate synthase; A 100.0 2.5E-72 8.4E-77 588.5 34.6 322 3-327 3-334 (334)
2 3pff_A ATP-citrate synthase; p 100.0 5.6E-66 1.9E-70 591.4 31.6 316 5-325 491-818 (829)
3 2yv2_A Succinyl-COA synthetase 100.0 3.3E-62 1.1E-66 507.5 30.4 286 3-309 6-296 (297)
4 2fp4_A Succinyl-COA ligase [GD 100.0 8.5E-62 2.9E-66 505.8 30.6 285 3-310 7-301 (305)
5 2yv1_A Succinyl-COA ligase [AD 100.0 2E-61 6.8E-66 500.9 29.2 283 3-309 6-293 (294)
6 1oi7_A Succinyl-COA synthetase 100.0 7E-61 2.4E-65 495.4 29.9 282 5-308 2-287 (288)
7 2csu_A 457AA long hypothetical 100.0 1.8E-62 6E-67 537.7 17.0 331 3-367 2-346 (457)
8 2nu8_A Succinyl-COA ligase [AD 100.0 1.1E-58 3.8E-63 479.3 30.7 281 5-308 2-287 (288)
9 2p2w_A Citrate synthase; trans 100.0 9.1E-52 3.1E-56 438.0 21.0 232 332-593 112-349 (367)
10 2c6x_A Citrate synthase 1; tri 100.0 1.6E-51 5.5E-56 435.1 19.3 234 331-593 110-351 (363)
11 2h12_A Citrate synthase; acido 100.0 2E-51 7E-56 442.9 20.0 226 332-585 166-409 (436)
12 3msu_A Citrate synthase; helix 100.0 5.7E-52 1.9E-56 444.7 15.3 234 332-593 164-419 (427)
13 1vgp_A 373AA long hypothetical 100.0 1.9E-51 6.6E-56 436.7 17.9 234 332-593 114-359 (373)
14 1iom_A Citrate synthase; open 100.0 3.6E-51 1.2E-55 434.9 19.6 222 338-585 122-350 (377)
15 3hwk_A Methylcitrate synthase; 100.0 1.4E-51 4.8E-56 440.1 16.4 228 339-593 167-402 (414)
16 1aj8_A Citrate synthase; hyper 100.0 3.1E-51 1.1E-55 434.5 17.8 223 338-587 121-347 (371)
17 3tqg_A 2-methylcitrate synthas 100.0 6.8E-52 2.3E-56 438.9 12.6 235 330-593 117-360 (375)
18 1o7x_A Citrate synthase; lyase 100.0 3.5E-51 1.2E-55 435.0 17.6 234 332-593 117-359 (377)
19 1a59_A Citrate synthase; cold- 100.0 3.2E-51 1.1E-55 436.0 17.1 224 338-587 124-360 (378)
20 1vgm_A 378AA long hypothetical 100.0 5.6E-51 1.9E-55 433.5 16.9 234 332-593 118-360 (378)
21 2ifc_A Citrate synthase; oxalo 100.0 4.4E-51 1.5E-55 435.2 15.6 234 332-593 122-366 (385)
22 2ibp_A Citrate synthase; disul 100.0 7.2E-51 2.5E-55 435.9 16.9 224 338-587 152-386 (409)
23 3o8j_A 2-methylcitrate synthas 100.0 4.3E-51 1.5E-55 435.6 13.9 235 330-593 146-389 (404)
24 3l96_A Citrate synthase; quate 100.0 1.9E-51 6.4E-56 441.0 8.1 230 338-593 162-408 (426)
25 1csh_A Citrate synthase; lyase 100.0 2.7E-49 9.3E-54 426.7 20.1 230 338-594 174-421 (435)
26 3dmy_A Protein FDRA; predicted 100.0 7.3E-47 2.5E-51 412.7 13.9 240 56-341 20-276 (480)
27 1y81_A Conserved hypothetical 99.8 1.4E-20 4.8E-25 173.6 9.3 118 4-140 9-132 (138)
28 1iuk_A Hypothetical protein TT 99.8 3.6E-21 1.2E-25 178.0 2.9 120 4-140 7-133 (140)
29 3ff4_A Uncharacterized protein 99.8 5.1E-20 1.7E-24 166.2 5.7 108 8-136 3-116 (122)
30 2duw_A Putative COA-binding pr 99.8 3.3E-20 1.1E-24 172.5 4.4 120 4-140 7-133 (145)
31 2d59_A Hypothetical protein PH 99.8 8.7E-20 3E-24 169.4 5.6 117 4-139 16-139 (144)
32 3ijp_A DHPR, dihydrodipicolina 98.2 5.2E-06 1.8E-10 85.0 10.2 123 7-135 18-149 (288)
33 4f3y_A DHPR, dihydrodipicolina 97.9 2.3E-05 7.9E-10 79.7 9.3 118 10-135 8-134 (272)
34 3ufx_B Succinyl-COA synthetase 97.7 6.9E-05 2.4E-09 80.2 9.1 124 160-307 246-373 (397)
35 1dih_A Dihydrodipicolinate red 97.7 4.4E-05 1.5E-09 77.7 6.8 121 9-136 5-134 (273)
36 2csu_A 457AA long hypothetical 97.7 0.00048 1.6E-08 75.0 14.8 127 160-309 292-446 (457)
37 2fp4_B Succinyl-COA ligase [GD 97.5 0.00079 2.7E-08 71.9 13.1 124 160-307 262-391 (395)
38 2nu8_B SCS-beta, succinyl-COA 97.4 0.0017 6E-08 69.1 14.2 124 160-307 255-384 (388)
39 3dmy_A Protein FDRA; predicted 97.1 0.013 4.6E-07 63.9 17.8 128 160-308 248-412 (480)
40 3qy9_A DHPR, dihydrodipicolina 97.1 0.0012 4E-08 66.0 8.4 107 10-135 4-113 (243)
41 4ew6_A D-galactose-1-dehydroge 97.1 0.0017 5.9E-08 67.4 9.9 111 8-131 24-140 (330)
42 3q2i_A Dehydrogenase; rossmann 97.0 0.0012 4.1E-08 69.0 8.5 117 9-132 13-135 (354)
43 2dc1_A L-aspartate dehydrogena 97.0 0.0017 6E-08 63.9 8.6 110 11-137 2-116 (236)
44 1p9l_A Dihydrodipicolinate red 97.0 0.0061 2.1E-07 60.8 12.6 100 11-135 2-109 (245)
45 3db2_A Putative NADPH-dependen 97.0 0.0012 4.2E-08 68.9 7.7 118 8-132 4-126 (354)
46 3evn_A Oxidoreductase, GFO/IDH 96.9 0.007 2.4E-07 62.5 12.7 118 8-132 4-127 (329)
47 3c1a_A Putative oxidoreductase 96.9 0.0049 1.7E-07 63.2 11.4 115 9-132 10-129 (315)
48 3o9z_A Lipopolysaccaride biosy 96.8 0.007 2.4E-07 62.3 12.1 118 9-132 3-132 (312)
49 1lc0_A Biliverdin reductase A; 96.8 0.0062 2.1E-07 62.1 11.0 112 8-132 6-125 (294)
50 3kux_A Putative oxidoreductase 96.8 0.0049 1.7E-07 64.3 10.3 115 8-131 6-126 (352)
51 2p2s_A Putative oxidoreductase 96.7 0.0065 2.2E-07 62.8 11.1 115 8-128 3-121 (336)
52 3oa2_A WBPB; oxidoreductase, s 96.7 0.0094 3.2E-07 61.5 11.9 117 10-132 4-133 (318)
53 3e18_A Oxidoreductase; dehydro 96.7 0.0032 1.1E-07 66.0 8.1 116 8-131 4-124 (359)
54 3i23_A Oxidoreductase, GFO/IDH 96.7 0.0034 1.2E-07 65.5 8.2 114 10-131 3-124 (349)
55 3rc1_A Sugar 3-ketoreductase; 96.6 0.0032 1.1E-07 65.8 7.8 112 9-127 27-143 (350)
56 3fhl_A Putative oxidoreductase 96.6 0.0051 1.8E-07 64.4 9.3 115 8-131 4-124 (362)
57 3u3x_A Oxidoreductase; structu 96.6 0.0062 2.1E-07 63.9 9.9 120 6-131 23-147 (361)
58 4hkt_A Inositol 2-dehydrogenas 96.6 0.003 1E-07 65.2 7.4 114 10-131 4-122 (331)
59 3moi_A Probable dehydrogenase; 96.6 0.0024 8.1E-08 67.7 6.7 117 9-132 2-124 (387)
60 3euw_A MYO-inositol dehydrogen 96.6 0.0023 7.8E-08 66.5 6.4 116 9-131 4-124 (344)
61 3e9m_A Oxidoreductase, GFO/IDH 96.6 0.005 1.7E-07 63.7 8.9 118 8-132 4-127 (330)
62 4gmf_A Yersiniabactin biosynth 96.6 0.0019 6.6E-08 68.4 5.6 111 9-130 7-126 (372)
63 3m2t_A Probable dehydrogenase; 96.5 0.0053 1.8E-07 64.3 8.3 118 8-131 4-127 (359)
64 1zh8_A Oxidoreductase; TM0312, 96.5 0.0046 1.6E-07 64.3 7.7 118 8-132 17-142 (340)
65 2g0t_A Conserved hypothetical 96.5 0.0088 3E-07 62.7 9.7 123 1-130 13-150 (350)
66 3ec7_A Putative dehydrogenase; 96.4 0.005 1.7E-07 64.5 7.9 117 8-131 22-147 (357)
67 3e82_A Putative oxidoreductase 96.4 0.0058 2E-07 64.2 8.3 114 9-131 7-126 (364)
68 4fb5_A Probable oxidoreductase 96.4 0.0077 2.6E-07 63.0 9.0 116 8-132 24-154 (393)
69 1f06_A MESO-diaminopimelate D- 96.4 0.0049 1.7E-07 63.8 7.3 110 8-130 2-117 (320)
70 1tlt_A Putative oxidoreductase 96.4 0.011 3.8E-07 60.6 9.9 111 8-127 4-119 (319)
71 3ezy_A Dehydrogenase; structur 96.3 0.0056 1.9E-07 63.6 7.2 116 10-132 3-124 (344)
72 3uuw_A Putative oxidoreductase 96.3 0.0057 1.9E-07 62.4 7.0 112 7-127 4-120 (308)
73 3btv_A Galactose/lactose metab 96.3 0.0065 2.2E-07 65.5 7.7 115 9-129 20-152 (438)
74 3f4l_A Putative oxidoreductase 96.3 0.0072 2.5E-07 62.8 7.7 116 9-131 2-124 (345)
75 3mz0_A Inositol 2-dehydrogenas 96.2 0.0054 1.8E-07 63.7 6.4 115 10-131 3-126 (344)
76 3gdo_A Uncharacterized oxidore 96.2 0.0072 2.5E-07 63.2 7.3 115 8-131 4-124 (358)
77 2glx_A 1,5-anhydro-D-fructose 96.1 0.0096 3.3E-07 61.2 8.0 115 11-132 2-122 (332)
78 3cea_A MYO-inositol 2-dehydrog 96.1 0.011 3.9E-07 61.0 8.4 117 8-131 7-131 (346)
79 1ydw_A AX110P-like protein; st 96.1 0.01 3.6E-07 61.9 8.2 118 8-132 5-131 (362)
80 3keo_A Redox-sensing transcrip 96.1 0.013 4.3E-07 57.2 8.1 70 29-106 108-181 (212)
81 3dty_A Oxidoreductase, GFO/IDH 96.1 0.017 5.9E-07 61.2 9.9 121 7-132 10-145 (398)
82 3ohs_X Trans-1,2-dihydrobenzen 96.0 0.01 3.5E-07 61.3 7.5 116 9-131 2-125 (334)
83 4gqa_A NAD binding oxidoreduct 96.0 0.0072 2.4E-07 64.4 6.3 116 10-132 27-156 (412)
84 2ho3_A Oxidoreductase, GFO/IDH 96.0 0.018 6E-07 59.2 9.0 115 10-132 2-122 (325)
85 1h6d_A Precursor form of gluco 95.9 0.0096 3.3E-07 64.1 6.9 117 9-132 83-210 (433)
86 3v5n_A Oxidoreductase; structu 95.9 0.02 6.7E-07 61.3 8.9 120 8-132 36-170 (417)
87 4had_A Probable oxidoreductase 95.8 0.0083 2.8E-07 62.2 5.7 112 11-131 25-145 (350)
88 2nvw_A Galactose/lactose metab 95.7 0.012 4.3E-07 64.2 7.0 117 8-131 38-174 (479)
89 3l6d_A Putative oxidoreductase 95.7 0.0087 3E-07 61.3 5.2 117 4-129 4-124 (306)
90 1j5p_A Aspartate dehydrogenase 95.7 0.02 6.9E-07 57.3 7.5 104 10-131 13-119 (253)
91 4dll_A 2-hydroxy-3-oxopropiona 95.6 0.023 7.8E-07 58.5 7.9 112 9-129 31-147 (320)
92 3bio_A Oxidoreductase, GFO/IDH 95.6 0.016 5.5E-07 59.4 6.6 111 8-130 8-124 (304)
93 4e21_A 6-phosphogluconate dehy 95.5 0.023 7.9E-07 59.7 7.8 117 7-130 20-139 (358)
94 4gbj_A 6-phosphogluconate dehy 95.4 0.041 1.4E-06 56.2 9.0 109 11-129 7-120 (297)
95 3qha_A Putative oxidoreductase 95.4 0.062 2.1E-06 54.5 10.4 111 9-129 15-128 (296)
96 1yb4_A Tartronic semialdehyde 95.4 0.11 3.8E-06 52.0 12.1 109 9-128 3-118 (295)
97 3obb_A Probable 3-hydroxyisobu 95.2 0.04 1.4E-06 56.5 8.2 110 10-128 4-119 (300)
98 3pef_A 6-phosphogluconate dehy 95.2 0.034 1.2E-06 56.0 7.5 111 10-129 2-118 (287)
99 3ip3_A Oxidoreductase, putativ 95.2 0.018 6.3E-07 59.5 5.6 116 10-132 3-127 (337)
100 3pdu_A 3-hydroxyisobutyrate de 95.2 0.048 1.6E-06 54.9 8.5 112 10-130 2-119 (287)
101 3doj_A AT3G25530, dehydrogenas 95.1 0.05 1.7E-06 55.6 8.5 113 8-129 20-138 (310)
102 2ixa_A Alpha-N-acetylgalactosa 95.0 0.041 1.4E-06 59.2 7.9 119 8-132 19-151 (444)
103 2zyd_A 6-phosphogluconate dehy 95.0 0.026 8.8E-07 61.7 6.2 118 6-129 12-136 (480)
104 3tqg_A 2-methylcitrate synthas 94.7 0.028 9.7E-07 59.3 5.6 102 349-456 19-129 (375)
105 2vt3_A REX, redox-sensing tran 94.6 0.054 1.8E-06 52.9 6.9 86 10-106 86-178 (215)
106 2h12_A Citrate synthase; acido 94.6 0.055 1.9E-06 58.3 7.4 86 347-438 60-149 (436)
107 2h78_A Hibadh, 3-hydroxyisobut 94.6 0.094 3.2E-06 53.0 8.9 111 10-129 4-120 (302)
108 3nkl_A UDP-D-quinovosamine 4-d 94.5 0.12 4.2E-06 45.9 8.4 85 9-102 4-97 (141)
109 2p4q_A 6-phosphogluconate dehy 94.3 0.075 2.6E-06 58.3 7.8 115 10-129 11-132 (497)
110 3abi_A Putative uncharacterize 94.1 0.021 7.3E-07 59.8 3.0 110 9-128 16-129 (365)
111 3qsg_A NAD-binding phosphogluc 94.0 0.1 3.6E-06 53.4 7.9 112 10-130 25-143 (312)
112 2gf2_A Hibadh, 3-hydroxyisobut 94.0 0.26 8.9E-06 49.4 10.7 109 10-127 1-115 (296)
113 2iz1_A 6-phosphogluconate dehy 93.9 0.063 2.2E-06 58.4 6.2 116 9-129 5-126 (474)
114 1vgp_A 373AA long hypothetical 93.8 0.031 1.1E-06 59.1 3.5 103 348-456 14-124 (373)
115 2dt5_A AT-rich DNA-binding pro 93.8 0.17 5.8E-06 49.1 8.5 85 10-105 81-172 (211)
116 2p2w_A Citrate synthase; trans 93.7 0.028 9.5E-07 59.3 3.0 102 348-455 13-121 (367)
117 1iom_A Citrate synthase; open 93.7 0.033 1.1E-06 59.0 3.5 85 348-438 14-102 (377)
118 2uyy_A N-PAC protein; long-cha 93.7 0.15 5.2E-06 51.8 8.3 112 9-129 30-147 (316)
119 1xea_A Oxidoreductase, GFO/IDH 93.6 0.11 3.7E-06 53.2 7.2 110 9-127 2-117 (323)
120 1vpd_A Tartronate semialdehyde 93.6 0.11 3.7E-06 52.3 7.0 109 10-129 6-122 (299)
121 3cky_A 2-hydroxymethyl glutara 93.6 0.24 8.2E-06 49.8 9.5 110 8-128 3-120 (301)
122 2pgd_A 6-phosphogluconate dehy 93.2 0.14 4.8E-06 55.8 7.6 116 10-129 3-124 (482)
123 1vm6_A DHPR, dihydrodipicolina 93.2 0.3 1E-05 48.0 9.0 93 15-135 17-114 (228)
124 3hwk_A Methylcitrate synthase; 93.1 0.039 1.3E-06 59.0 2.8 104 347-456 59-172 (414)
125 3do5_A HOM, homoserine dehydro 93.0 0.43 1.5E-05 49.4 10.5 146 58-241 65-224 (327)
126 1pgj_A 6PGDH, 6-PGDH, 6-phosph 92.9 0.11 3.9E-06 56.5 6.3 116 10-129 2-126 (478)
127 2z2v_A Hypothetical protein PH 92.9 0.049 1.7E-06 57.3 3.2 111 9-128 16-129 (365)
128 2obn_A Hypothetical protein; s 92.8 0.16 5.4E-06 53.2 6.9 105 18-129 21-132 (349)
129 4gwg_A 6-phosphogluconate dehy 92.8 0.3 1E-05 53.3 9.4 118 10-130 5-127 (484)
130 3g0o_A 3-hydroxyisobutyrate de 92.8 0.085 2.9E-06 53.6 4.7 112 9-129 7-125 (303)
131 3upl_A Oxidoreductase; rossman 92.5 0.095 3.3E-06 56.6 4.8 118 8-129 22-163 (446)
132 3tri_A Pyrroline-5-carboxylate 92.4 0.18 6.3E-06 50.7 6.6 94 9-111 3-104 (280)
133 3fr7_A Putative ketol-acid red 92.1 0.05 1.7E-06 59.3 2.0 93 10-111 55-160 (525)
134 1a59_A Citrate synthase; cold- 92.1 0.061 2.1E-06 57.0 2.6 86 347-438 15-104 (378)
135 3ba1_A HPPR, hydroxyphenylpyru 92.0 0.15 5.2E-06 52.9 5.5 108 6-130 161-275 (333)
136 3oqb_A Oxidoreductase; structu 91.9 0.3 1E-05 51.1 7.8 75 55-132 66-143 (383)
137 3mwd_A ATP-citrate synthase; A 91.9 0.37 1.3E-05 51.7 8.5 96 160-257 271-385 (425)
138 2cvz_A Dehydrogenase, 3-hydrox 91.8 0.29 9.9E-06 48.7 7.2 108 10-128 2-112 (289)
139 3l96_A Citrate synthase; quate 91.6 0.23 7.8E-06 53.3 6.5 85 349-439 54-142 (426)
140 3mtj_A Homoserine dehydrogenas 91.4 0.39 1.3E-05 51.8 8.1 162 8-192 9-186 (444)
141 4ezb_A Uncharacterized conserv 91.4 0.21 7E-06 51.3 5.7 109 10-129 25-144 (317)
142 3o8j_A 2-methylcitrate synthas 90.5 0.049 1.7E-06 58.1 -0.1 84 349-438 45-132 (404)
143 1z82_A Glycerol-3-phosphate de 90.1 0.07 2.4E-06 55.0 0.7 94 8-111 13-117 (335)
144 2ahr_A Putative pyrroline carb 89.7 0.25 8.4E-06 48.7 4.4 92 9-111 3-96 (259)
145 1aj8_A Citrate synthase; hyper 89.6 0.06 2.1E-06 56.8 -0.3 85 348-438 12-100 (371)
146 2rcy_A Pyrroline carboxylate r 89.5 1.1 3.9E-05 43.7 9.0 87 9-111 4-97 (262)
147 1vgm_A 378AA long hypothetical 89.4 0.067 2.3E-06 56.6 -0.0 103 348-456 16-128 (378)
148 4dgs_A Dehydrogenase; structur 89.1 0.81 2.8E-05 47.6 8.0 107 7-127 169-279 (340)
149 1o7x_A Citrate synthase; lyase 88.8 0.067 2.3E-06 56.6 -0.6 103 348-456 15-127 (377)
150 1mx3_A CTBP1, C-terminal bindi 88.7 0.31 1.1E-05 50.9 4.4 110 7-126 166-279 (347)
151 4h3v_A Oxidoreductase domain p 88.5 1 3.5E-05 46.5 8.3 75 55-132 58-138 (390)
152 3b1f_A Putative prephenate deh 88.2 0.36 1.2E-05 48.3 4.4 112 8-129 5-124 (290)
153 3ulk_A Ketol-acid reductoisome 87.9 0.31 1.1E-05 52.4 3.8 99 5-110 33-136 (491)
154 2c6x_A Citrate synthase 1; tri 87.7 0.088 3E-06 55.4 -0.5 103 348-456 12-121 (363)
155 1csh_A Citrate synthase; lyase 87.7 0.078 2.7E-06 57.1 -0.9 90 346-440 48-148 (435)
156 1qp8_A Formate dehydrogenase; 87.5 1 3.6E-05 45.9 7.4 105 7-126 122-230 (303)
157 2ifc_A Citrate synthase; oxalo 87.3 0.11 3.9E-06 55.0 0.0 103 348-456 18-132 (385)
158 2ibp_A Citrate synthase; disul 87.3 0.095 3.2E-06 56.0 -0.6 87 347-439 32-121 (409)
159 3gvx_A Glycerate dehydrogenase 87.1 0.72 2.5E-05 46.9 5.8 106 7-126 120-229 (290)
160 2izz_A Pyrroline-5-carboxylate 86.8 0.94 3.2E-05 46.3 6.7 97 6-111 19-124 (322)
161 3c8m_A Homoserine dehydrogenas 86.2 1.2 4.1E-05 46.0 7.0 66 59-128 72-144 (331)
162 3d1l_A Putative NADP oxidoredu 85.9 0.61 2.1E-05 46.0 4.5 94 8-110 9-107 (266)
163 2pv7_A T-protein [includes: ch 85.5 6.3 0.00021 39.6 12.0 84 10-116 22-109 (298)
164 3ggo_A Prephenate dehydrogenas 85.2 1.7 5.7E-05 44.5 7.5 107 10-129 34-148 (314)
165 3k96_A Glycerol-3-phosphate de 85.0 1.3 4.3E-05 46.3 6.6 98 9-111 29-139 (356)
166 1i36_A Conserved hypothetical 84.9 1.8 6E-05 42.5 7.3 102 10-123 1-105 (264)
167 1yqg_A Pyrroline-5-carboxylate 84.7 0.26 8.8E-06 48.5 1.1 89 10-110 1-93 (263)
168 3ing_A Homoserine dehydrogenas 84.5 2.5 8.4E-05 43.6 8.4 147 62-241 73-225 (325)
169 3gt0_A Pyrroline-5-carboxylate 84.5 0.66 2.3E-05 45.4 3.9 92 10-111 3-103 (247)
170 3msu_A Citrate synthase; helix 84.4 0.19 6.6E-06 53.8 0.0 103 348-456 62-174 (427)
171 1sc6_A PGDH, D-3-phosphoglycer 84.2 1 3.6E-05 47.9 5.6 104 7-126 143-253 (404)
172 3m2p_A UDP-N-acetylglucosamine 84.1 10 0.00035 37.6 12.8 88 10-106 3-109 (311)
173 1dxy_A D-2-hydroxyisocaproate 83.9 0.95 3.3E-05 46.8 5.1 104 7-126 143-253 (333)
174 3hg7_A D-isomer specific 2-hyd 83.7 1 3.6E-05 46.4 5.2 109 7-126 138-250 (324)
175 3pid_A UDP-glucose 6-dehydroge 83.2 1.7 5.8E-05 46.6 6.8 108 8-122 35-169 (432)
176 4ea9_A Perosamine N-acetyltran 82.8 4 0.00014 39.0 8.7 86 10-105 13-103 (220)
177 1xdw_A NAD+-dependent (R)-2-hy 82.1 1 3.5E-05 46.5 4.4 104 7-126 144-254 (331)
178 3evt_A Phosphoglycerate dehydr 81.9 1.5 5.2E-05 45.2 5.6 109 7-129 135-250 (324)
179 2yq5_A D-isomer specific 2-hyd 81.9 1.1 3.7E-05 46.7 4.5 103 8-126 147-256 (343)
180 2g76_A 3-PGDH, D-3-phosphoglyc 81.4 1 3.4E-05 46.7 4.1 109 7-126 163-275 (335)
181 1gdh_A D-glycerate dehydrogena 80.8 1.4 4.9E-05 45.2 4.9 110 7-126 144-258 (320)
182 2w2k_A D-mandelate dehydrogena 80.5 1.2 4.1E-05 46.3 4.3 107 7-125 161-275 (348)
183 3k5p_A D-3-phosphoglycerate de 80.3 2.4 8.3E-05 45.2 6.6 104 7-126 154-264 (416)
184 1mv8_A GMD, GDP-mannose 6-dehy 80.0 2.2 7.5E-05 45.6 6.2 111 10-126 1-145 (436)
185 4g2n_A D-isomer specific 2-hyd 79.9 1.7 5.7E-05 45.3 5.1 106 7-126 171-283 (345)
186 3pp8_A Glyoxylate/hydroxypyruv 79.5 2.5 8.6E-05 43.3 6.3 105 7-126 137-249 (315)
187 3uw3_A Aspartate-semialdehyde 78.8 10 0.00035 39.8 10.8 115 9-133 4-139 (377)
188 3dhn_A NAD-dependent epimerase 78.5 5.7 0.0002 37.3 8.2 90 10-106 5-112 (227)
189 3ktd_A Prephenate dehydrogenas 78.5 0.77 2.6E-05 47.7 2.0 100 10-116 9-111 (341)
190 1bg6_A N-(1-D-carboxylethyl)-L 78.2 5 0.00017 40.8 8.1 95 8-108 3-111 (359)
191 3pff_A ATP-citrate synthase; p 78.0 4.2 0.00014 47.1 8.1 96 160-257 271-385 (829)
192 2ozp_A N-acetyl-gamma-glutamyl 77.8 5.9 0.0002 41.0 8.5 36 72-109 68-103 (345)
193 2nac_A NAD-dependent formate d 77.7 1.5 5E-05 46.5 3.9 111 7-126 189-303 (393)
194 4huj_A Uncharacterized protein 77.4 2.3 7.8E-05 40.8 4.9 93 9-109 23-117 (220)
195 2dpo_A L-gulonate 3-dehydrogen 76.8 3.2 0.00011 42.5 6.1 97 9-111 6-129 (319)
196 2j6i_A Formate dehydrogenase; 76.6 1.8 6.1E-05 45.3 4.2 111 7-126 162-277 (364)
197 4hy3_A Phosphoglycerate oxidor 76.5 2 7E-05 45.0 4.6 109 7-126 174-286 (365)
198 3pzr_A Aspartate-semialdehyde 76.3 11 0.00037 39.5 10.1 60 72-133 64-135 (370)
199 1j4a_A D-LDH, D-lactate dehydr 76.0 1.7 5.9E-05 44.8 3.8 105 7-126 144-255 (333)
200 3rst_A Signal peptide peptidas 75.2 2 6.8E-05 42.2 3.9 55 203-257 33-92 (240)
201 2gcg_A Glyoxylate reductase/hy 74.2 2 6.8E-05 44.2 3.7 107 7-126 153-266 (330)
202 1np3_A Ketol-acid reductoisome 73.7 2.5 8.5E-05 43.6 4.3 93 7-109 14-110 (338)
203 1wwk_A Phosphoglycerate dehydr 72.8 1.7 5.9E-05 44.3 2.8 106 7-126 140-252 (307)
204 3vps_A TUNA, NAD-dependent epi 72.7 49 0.0017 32.3 13.6 91 9-106 7-119 (321)
205 2o3j_A UDP-glucose 6-dehydroge 72.6 8.1 0.00028 41.8 8.3 110 9-124 9-154 (481)
206 2cuk_A Glycerate dehydrogenase 72.6 4.1 0.00014 41.6 5.6 102 7-125 142-247 (311)
207 2ekl_A D-3-phosphoglycerate de 72.4 1.4 4.8E-05 45.1 2.1 106 7-126 140-252 (313)
208 3oet_A Erythronate-4-phosphate 72.1 1.8 6.3E-05 45.6 2.9 105 7-128 117-232 (381)
209 4id9_A Short-chain dehydrogena 72.0 21 0.0007 35.8 10.8 91 7-106 17-126 (347)
210 3gg9_A D-3-phosphoglycerate de 71.7 1 3.6E-05 46.9 0.9 110 7-126 158-271 (352)
211 2g5c_A Prephenate dehydrogenas 71.4 8.2 0.00028 38.0 7.4 103 10-121 2-111 (281)
212 1ebf_A Homoserine dehydrogenas 71.2 5 0.00017 41.8 6.0 111 9-128 4-140 (358)
213 1x0v_A GPD-C, GPDH-C, glycerol 71.1 2.8 9.6E-05 42.9 4.0 48 57-109 78-128 (354)
214 3jtm_A Formate dehydrogenase, 71.1 2.8 9.5E-05 43.7 4.0 108 7-126 162-276 (351)
215 4egb_A DTDP-glucose 4,6-dehydr 70.9 26 0.00089 35.0 11.3 46 60-106 87-149 (346)
216 2o4c_A Erythronate-4-phosphate 70.9 1.8 6.3E-05 45.6 2.6 103 7-126 114-227 (380)
217 3gg2_A Sugar dehydrogenase, UD 70.9 4.5 0.00015 43.4 5.7 107 10-122 3-138 (450)
218 1txg_A Glycerol-3-phosphate de 70.6 1.5 5.2E-05 44.4 1.8 91 10-108 1-107 (335)
219 4ina_A Saccharopine dehydrogen 69.4 2.6 9E-05 44.6 3.4 70 60-132 65-142 (405)
220 2q3e_A UDP-glucose 6-dehydroge 69.3 7 0.00024 42.0 6.8 109 10-124 6-149 (467)
221 3e48_A Putative nucleoside-dip 69.3 17 0.00059 35.3 9.3 90 10-106 1-106 (289)
222 2f1k_A Prephenate dehydrogenas 69.2 4.2 0.00014 40.0 4.7 97 10-117 1-102 (279)
223 1hdo_A Biliverdin IX beta redu 69.0 15 0.00051 33.4 8.3 90 10-106 4-111 (206)
224 4a7p_A UDP-glucose dehydrogena 68.6 10 0.00035 40.7 7.8 107 11-124 10-147 (446)
225 3dqp_A Oxidoreductase YLBE; al 68.4 29 0.00097 32.3 10.3 90 10-106 1-106 (219)
226 2czc_A Glyceraldehyde-3-phosph 68.0 9.1 0.00031 39.3 7.1 47 56-108 66-112 (334)
227 3ehe_A UDP-glucose 4-epimerase 67.8 52 0.0018 32.2 12.6 43 61-106 55-114 (313)
228 3r6d_A NAD-dependent epimerase 67.7 35 0.0012 31.7 10.8 88 13-106 8-108 (221)
229 3dtt_A NADP oxidoreductase; st 67.2 4.6 0.00016 39.3 4.5 79 7-93 17-110 (245)
230 3ic5_A Putative saccharopine d 66.7 3.9 0.00014 34.0 3.4 102 10-122 6-115 (118)
231 2dbq_A Glyoxylate reductase; D 65.9 3.2 0.00011 42.8 3.1 106 7-126 148-260 (334)
232 3qvo_A NMRA family protein; st 65.4 18 0.0006 34.4 8.2 91 10-106 23-125 (236)
233 1dlj_A UDP-glucose dehydrogena 65.3 6.2 0.00021 41.6 5.3 59 58-119 62-130 (402)
234 2py6_A Methyltransferase FKBM; 64.8 1.9 6.6E-05 45.7 1.2 78 11-99 54-135 (409)
235 3viv_A 441AA long hypothetical 64.2 9.6 0.00033 37.2 6.0 72 160-257 6-83 (230)
236 4e5n_A Thermostable phosphite 64.2 3 0.0001 43.0 2.5 110 7-126 143-256 (330)
237 2pi1_A D-lactate dehydrogenase 64.0 3.6 0.00012 42.4 3.1 105 7-126 139-250 (334)
238 1rkx_A CDP-glucose-4,6-dehydra 64.0 12 0.0004 37.9 7.0 105 1-106 1-132 (357)
239 2d0i_A Dehydrogenase; structur 64.0 3.1 0.00011 42.9 2.6 108 7-129 144-258 (333)
240 3hwr_A 2-dehydropantoate 2-red 63.9 9.9 0.00034 38.4 6.4 99 5-110 15-125 (318)
241 2ejw_A HDH, homoserine dehydro 63.4 5.8 0.0002 40.9 4.5 102 9-123 3-116 (332)
242 2y0c_A BCEC, UDP-glucose dehyd 63.0 7.6 0.00026 42.0 5.6 108 9-122 8-144 (478)
243 2axq_A Saccharopine dehydrogen 62.8 7.3 0.00025 42.1 5.4 60 62-128 81-140 (467)
244 1ygy_A PGDH, D-3-phosphoglycer 62.8 3.6 0.00012 45.2 2.9 110 6-126 139-252 (529)
245 2ew2_A 2-dehydropantoate 2-red 62.7 2.3 7.8E-05 42.4 1.3 96 10-110 4-113 (316)
246 2pk3_A GDP-6-deoxy-D-LYXO-4-he 62.6 24 0.00083 34.7 8.9 96 5-106 7-126 (321)
247 4b8w_A GDP-L-fucose synthase; 62.2 40 0.0014 32.6 10.4 88 6-107 3-114 (319)
248 1lss_A TRK system potassium up 62.2 13 0.00046 31.6 6.1 38 72-109 69-106 (140)
249 1ff9_A Saccharopine reductase; 62.2 11 0.00039 40.3 6.7 111 10-128 4-120 (450)
250 4a29_A Engineered retro-aldol 62.1 11 0.00039 37.3 6.1 94 88-185 118-226 (258)
251 2rir_A Dipicolinate synthase, 61.9 6.4 0.00022 39.5 4.4 119 6-139 154-277 (300)
252 1yj8_A Glycerol-3-phosphate de 61.9 5.1 0.00017 41.5 3.8 51 56-110 90-146 (375)
253 2rdm_A Response regulator rece 61.3 44 0.0015 27.5 9.2 80 162-251 6-86 (132)
254 2g1u_A Hypothetical protein TM 60.8 25 0.00086 31.1 7.9 98 8-108 18-121 (155)
255 1t4b_A Aspartate-semialdehyde 60.5 52 0.0018 34.2 11.2 60 72-133 65-136 (367)
256 3i42_A Response regulator rece 60.0 38 0.0013 27.9 8.5 78 163-251 5-84 (127)
257 3k2g_A Resiniferatoxin-binding 59.0 23 0.0008 36.7 8.3 46 88-136 90-136 (364)
258 1evy_A Glycerol-3-phosphate de 58.4 0.62 2.1E-05 48.3 -4.0 92 11-110 17-129 (366)
259 3ixl_A Amdase, arylmalonate de 58.3 12 0.0004 36.6 5.5 50 86-136 105-154 (240)
260 3h1g_A Chemotaxis protein CHEY 57.9 41 0.0014 27.9 8.4 113 163-308 7-125 (129)
261 2ph5_A Homospermidine synthase 57.6 14 0.00049 39.9 6.4 90 8-102 11-112 (480)
262 4e12_A Diketoreductase; oxidor 57.4 5.9 0.0002 39.4 3.2 98 9-111 4-127 (283)
263 1cf2_P Protein (glyceraldehyde 56.4 15 0.00053 37.7 6.3 45 57-107 66-110 (337)
264 3cg4_A Response regulator rece 56.1 51 0.0017 27.6 8.8 122 160-313 6-130 (142)
265 3d4o_A Dipicolinate synthase s 55.8 7.2 0.00024 39.1 3.5 117 7-139 153-275 (293)
266 2j48_A Two-component sensor ki 55.8 49 0.0017 26.2 8.3 78 163-251 3-82 (119)
267 4e7p_A Response regulator; DNA 54.7 49 0.0017 28.2 8.6 116 162-310 21-140 (150)
268 3hdv_A Response regulator; PSI 54.6 60 0.002 26.9 9.0 116 161-310 7-127 (136)
269 2nqt_A N-acetyl-gamma-glutamyl 53.7 29 0.001 35.9 7.9 35 72-109 80-114 (352)
270 1y7o_A ATP-dependent CLP prote 53.2 10 0.00036 36.5 4.1 64 191-257 47-116 (218)
271 3ew7_A LMO0794 protein; Q8Y8U8 53.1 42 0.0015 30.7 8.3 35 72-106 61-103 (221)
272 3bf0_A Protease 4; bacterial, 52.9 6.9 0.00024 43.6 3.1 47 204-251 75-127 (593)
273 1ks9_A KPA reductase;, 2-dehyd 52.9 29 0.001 33.7 7.5 91 10-109 1-101 (291)
274 1ccw_A Protein (glutamate muta 52.8 23 0.00079 31.3 6.0 61 72-132 54-121 (137)
275 2qr3_A Two-component system re 52.6 45 0.0015 27.8 7.8 113 162-309 4-125 (140)
276 3bf0_A Protease 4; bacterial, 52.1 9 0.00031 42.6 3.9 55 203-258 326-385 (593)
277 3oa2_A WBPB; oxidoreductase, s 52.0 32 0.0011 34.6 7.8 131 163-316 5-150 (318)
278 2x4g_A Nucleoside-diphosphate- 51.8 27 0.00093 34.6 7.2 24 11-35 15-42 (342)
279 2hmt_A YUAA protein; RCK, KTN, 51.8 27 0.00092 29.7 6.3 36 72-107 70-106 (144)
280 3eod_A Protein HNR; response r 51.6 81 0.0028 25.8 9.2 81 160-251 6-86 (130)
281 3jte_A Response regulator rece 51.5 82 0.0028 26.3 9.4 114 163-310 5-123 (143)
282 4dpk_A Malonyl-COA/succinyl-CO 51.2 13 0.00044 38.7 4.7 36 72-109 79-114 (359)
283 4dpl_A Malonyl-COA/succinyl-CO 51.2 13 0.00044 38.7 4.7 36 72-109 79-114 (359)
284 1nvm_B Acetaldehyde dehydrogen 51.0 12 0.00042 38.0 4.4 90 8-105 3-104 (312)
285 2rjn_A Response regulator rece 50.9 1.1E+02 0.0039 25.9 12.3 116 161-310 7-126 (154)
286 2hk9_A Shikimate dehydrogenase 50.9 2.2 7.5E-05 42.5 -1.2 107 8-128 128-239 (275)
287 3dr3_A N-acetyl-gamma-glutamyl 50.8 27 0.00094 35.9 7.1 36 72-109 75-110 (337)
288 3tha_A Tryptophan synthase alp 50.8 14 0.00049 36.5 4.7 39 86-126 105-143 (252)
289 3e8x_A Putative NAD-dependent 50.3 27 0.00091 32.9 6.5 93 6-106 18-131 (236)
290 3i83_A 2-dehydropantoate 2-red 50.3 18 0.00061 36.5 5.5 93 10-109 3-109 (320)
291 1rpn_A GDP-mannose 4,6-dehydra 50.2 59 0.002 32.0 9.4 98 8-106 12-138 (335)
292 3f6c_A Positive transcription 49.9 44 0.0015 27.6 7.3 113 163-309 3-119 (134)
293 2yjz_A Metalloreductase steap4 55.2 3.5 0.00012 39.2 0.0 91 7-110 17-110 (201)
294 3enk_A UDP-glucose 4-epimerase 49.6 69 0.0024 31.6 9.9 94 12-106 7-129 (341)
295 2cby_A ATP-dependent CLP prote 49.2 14 0.00046 35.4 4.1 76 174-257 17-98 (208)
296 3kjx_A Transcriptional regulat 49.0 1.3E+02 0.0044 29.8 11.8 112 107-250 36-153 (344)
297 3cnb_A DNA-binding response re 48.8 58 0.002 27.1 7.9 116 161-310 8-130 (143)
298 3qmj_A Enoyl-COA hydratase, EC 48.4 34 0.0012 33.4 7.1 51 205-258 39-113 (256)
299 3c85_A Putative glutathione-re 48.4 61 0.0021 29.2 8.5 111 10-132 40-161 (183)
300 3c24_A Putative oxidoreductase 48.3 9.2 0.00031 37.9 2.9 73 10-94 12-88 (286)
301 3hn2_A 2-dehydropantoate 2-red 48.3 31 0.0011 34.5 7.0 93 10-109 3-107 (312)
302 2gkg_A Response regulator homo 48.2 70 0.0024 25.8 8.2 79 163-253 7-88 (127)
303 1qkk_A DCTD, C4-dicarboxylate 47.5 82 0.0028 26.9 8.9 114 162-310 4-121 (155)
304 3kqf_A Enoyl-COA hydratase/iso 47.3 21 0.00072 35.2 5.4 54 204-258 41-116 (265)
305 1i4n_A Indole-3-glycerol phosp 46.5 31 0.0011 34.0 6.4 50 89-139 116-181 (251)
306 1f0y_A HCDH, L-3-hydroxyacyl-C 46.3 28 0.00096 34.6 6.2 52 57-111 88-142 (302)
307 2zay_A Response regulator rece 46.1 48 0.0017 28.0 7.0 118 160-312 7-130 (147)
308 3ruf_A WBGU; rossmann fold, UD 46.0 53 0.0018 32.7 8.3 30 8-37 24-56 (351)
309 3dfu_A Uncharacterized protein 45.5 32 0.0011 33.5 6.2 85 10-129 7-95 (232)
310 2b4a_A BH3024; flavodoxin-like 45.2 73 0.0025 26.5 8.0 82 160-251 14-95 (138)
311 3oh8_A Nucleoside-diphosphate 44.9 57 0.002 35.0 8.8 86 9-106 147-254 (516)
312 3i6i_A Putative leucoanthocyan 44.8 78 0.0027 31.6 9.4 94 8-103 9-117 (346)
313 1e6u_A GDP-fucose synthetase; 44.8 32 0.0011 33.8 6.4 82 10-106 4-107 (321)
314 3hv2_A Response regulator/HD d 44.6 1.4E+02 0.0049 25.2 13.7 117 160-311 13-134 (153)
315 3grc_A Sensor protein, kinase; 44.3 1.1E+02 0.0038 25.3 9.1 117 161-311 6-128 (140)
316 3tsm_A IGPS, indole-3-glycerol 44.2 37 0.0013 33.9 6.6 91 92-185 137-242 (272)
317 3p5m_A Enoyl-COA hydratase/iso 44.1 28 0.00095 34.1 5.6 54 204-258 38-106 (255)
318 3nav_A Tryptophan synthase alp 43.9 1.1E+02 0.0039 30.2 10.1 99 22-126 39-152 (271)
319 3kb6_A D-lactate dehydrogenase 43.8 25 0.00084 36.1 5.4 105 7-127 139-251 (334)
320 3cu5_A Two component transcrip 43.6 62 0.0021 27.3 7.3 81 163-251 4-84 (141)
321 2bka_A CC3, TAT-interacting pr 43.5 1E+02 0.0035 28.6 9.6 93 9-106 18-132 (242)
322 3heb_A Response regulator rece 43.4 1.4E+02 0.0049 25.1 9.8 117 162-310 5-135 (152)
323 2qsj_A DNA-binding response re 43.1 41 0.0014 28.8 6.1 80 163-250 5-84 (154)
324 1zej_A HBD-9, 3-hydroxyacyl-CO 42.8 7 0.00024 39.5 1.0 94 9-111 12-113 (293)
325 2c5a_A GDP-mannose-3', 5'-epim 42.2 81 0.0028 32.0 9.1 91 12-106 31-145 (379)
326 3hzh_A Chemotaxis response reg 41.9 41 0.0014 29.2 5.9 81 162-251 37-118 (157)
327 2pzm_A Putative nucleotide sug 41.7 64 0.0022 31.9 8.1 31 5-35 16-49 (330)
328 2vns_A Metalloreductase steap3 41.4 11 0.00039 35.6 2.3 90 9-111 28-121 (215)
329 1yg6_A ATP-dependent CLP prote 41.4 21 0.00072 33.5 4.1 53 204-258 43-98 (193)
330 2i99_A MU-crystallin homolog; 41.1 5.1 0.00018 40.7 -0.3 109 8-129 134-248 (312)
331 1orr_A CDP-tyvelose-2-epimeras 40.7 83 0.0028 31.0 8.7 94 12-106 3-125 (347)
332 3gpi_A NAD-dependent epimerase 40.5 83 0.0028 30.3 8.5 90 9-106 3-109 (286)
333 3a10_A Response regulator; pho 40.1 1.2E+02 0.0041 24.1 8.3 78 163-251 3-80 (116)
334 1eq2_A ADP-L-glycero-D-mannohe 40.0 1.1E+02 0.0039 29.4 9.5 33 73-106 69-116 (310)
335 2qxy_A Response regulator; reg 39.9 1.2E+02 0.0041 25.2 8.6 113 162-310 5-121 (142)
336 1jay_A Coenzyme F420H2:NADP+ o 39.9 19 0.00065 33.5 3.5 91 10-109 1-101 (212)
337 3eul_A Possible nitrate/nitrit 39.1 95 0.0032 26.3 7.9 118 160-310 14-135 (152)
338 3mm4_A Histidine kinase homolo 38.8 1.1E+02 0.0038 27.9 8.8 83 160-251 60-158 (206)
339 2qvg_A Two component response 38.7 1.6E+02 0.0056 24.3 9.3 83 161-251 7-96 (143)
340 2wm3_A NMRA-like family domain 38.2 68 0.0023 31.2 7.5 92 10-106 6-115 (299)
341 3cg0_A Response regulator rece 38.0 62 0.0021 26.9 6.4 116 161-311 9-129 (140)
342 2qv0_A Protein MRKE; structura 37.9 1E+02 0.0034 25.7 7.7 118 162-314 10-131 (143)
343 1xgk_A Nitrogen metabolite rep 37.9 58 0.002 33.0 7.2 95 9-107 5-114 (352)
344 2xij_A Methylmalonyl-COA mutas 37.7 47 0.0016 38.0 6.8 57 72-132 655-716 (762)
345 2raf_A Putative dinucleotide-b 37.7 74 0.0025 29.7 7.4 75 7-109 17-94 (209)
346 2c20_A UDP-glucose 4-epimerase 37.6 1.2E+02 0.004 29.7 9.3 91 13-106 4-118 (330)
347 1dbw_A Transcriptional regulat 37.5 1.6E+02 0.0056 23.8 10.2 79 162-251 4-82 (126)
348 1xyg_A Putative N-acetyl-gamma 37.3 44 0.0015 34.6 6.1 35 72-109 82-116 (359)
349 5nul_A Flavodoxin; electron tr 37.3 75 0.0026 27.1 6.8 59 72-130 45-113 (138)
350 3cz5_A Two-component response 37.3 64 0.0022 27.5 6.4 81 162-251 6-86 (153)
351 3o0f_A Putative metal-dependen 37.2 66 0.0023 32.5 7.3 102 22-135 149-265 (301)
352 3swx_A Probable enoyl-COA hydr 36.9 57 0.002 31.9 6.7 54 204-258 41-116 (265)
353 3o9z_A Lipopolysaccaride biosy 36.8 97 0.0033 30.9 8.5 112 163-297 5-130 (312)
354 3kto_A Response regulator rece 36.6 52 0.0018 27.5 5.6 116 161-311 6-127 (136)
355 3st7_A Capsular polysaccharide 36.5 72 0.0025 32.2 7.6 96 10-127 1-125 (369)
356 2d5c_A AROE, shikimate 5-dehyd 36.5 6.4 0.00022 38.7 -0.5 104 11-128 118-226 (263)
357 3gkb_A Putative enoyl-COA hydr 36.4 52 0.0018 32.8 6.3 52 204-258 40-120 (287)
358 3dbi_A Sugar-binding transcrip 36.3 1E+02 0.0035 30.4 8.6 113 107-250 29-149 (338)
359 4ggi_A UDP-2,3-diacylglucosami 36.2 21 0.00073 35.7 3.4 44 87-130 234-277 (283)
360 3g64_A Putative enoyl-COA hydr 36.2 35 0.0012 33.8 5.0 54 204-258 49-127 (279)
361 3dbi_A Sugar-binding transcrip 36.1 2.2E+02 0.0077 27.8 11.2 176 62-246 84-269 (338)
362 1db3_A GDP-mannose 4,6-dehydra 36.1 1.2E+02 0.0041 30.3 9.2 19 88-106 111-132 (372)
363 3lua_A Response regulator rece 36.0 67 0.0023 26.8 6.3 115 162-310 5-127 (140)
364 3pe8_A Enoyl-COA hydratase; em 35.8 26 0.00088 34.4 3.9 54 204-258 41-106 (256)
365 1t2a_A GDP-mannose 4,6 dehydra 35.5 1.8E+02 0.0062 29.1 10.5 95 11-106 25-156 (375)
366 3b2n_A Uncharacterized protein 35.4 1.1E+02 0.0036 25.4 7.4 114 163-309 5-122 (133)
367 3gow_A PAAG, probable enoyl-CO 35.4 60 0.002 31.6 6.5 54 204-258 32-105 (254)
368 1vl0_A DTDP-4-dehydrorhamnose 35.2 42 0.0015 32.4 5.4 58 9-81 11-72 (292)
369 2zcu_A Uncharacterized oxidore 35.1 44 0.0015 32.1 5.5 88 12-106 2-104 (286)
370 3oc7_A Enoyl-COA hydratase; se 35.0 44 0.0015 32.8 5.5 54 204-258 43-122 (267)
371 3fdu_A Putative enoyl-COA hydr 35.0 55 0.0019 32.2 6.2 24 233-258 90-113 (266)
372 3sc6_A DTDP-4-dehydrorhamnose 34.9 28 0.00094 33.7 3.9 55 12-81 7-65 (287)
373 2q1w_A Putative nucleotide sug 34.9 99 0.0034 30.6 8.2 94 12-106 23-137 (333)
374 3rft_A Uronate dehydrogenase; 34.7 67 0.0023 30.8 6.8 87 11-106 4-111 (267)
375 2ppy_A Enoyl-COA hydratase; be 34.4 42 0.0015 32.9 5.2 54 204-258 40-115 (265)
376 3g79_A NDP-N-acetyl-D-galactos 34.4 73 0.0025 34.3 7.5 105 9-118 18-159 (478)
377 3kht_A Response regulator; PSI 34.4 2E+02 0.0068 23.8 13.8 121 161-314 5-132 (144)
378 3t89_A 1,4-dihydroxy-2-naphtho 34.3 74 0.0025 31.7 7.1 52 204-258 60-137 (289)
379 1p9l_A Dihydrodipicolinate red 34.0 1.2E+02 0.004 29.6 8.3 110 163-308 2-116 (245)
380 3myb_A Enoyl-COA hydratase; ss 33.8 50 0.0017 32.9 5.7 54 204-258 58-133 (286)
381 3n75_A LDC, lysine decarboxyla 33.6 41 0.0014 38.2 5.6 76 167-255 12-87 (715)
382 1hzd_A AUH, AU-binding protein 33.5 28 0.00096 34.4 3.7 53 204-257 44-118 (272)
383 3qk7_A Transcriptional regulat 33.5 2E+02 0.0069 27.5 10.1 176 60-246 29-214 (294)
384 4dad_A Putative pilus assembly 33.3 84 0.0029 26.4 6.5 117 160-310 19-141 (146)
385 3hdg_A Uncharacterized protein 33.2 1.5E+02 0.0051 24.3 8.1 117 162-313 8-128 (137)
386 3llv_A Exopolyphosphatase-rela 33.1 33 0.0011 29.5 3.8 35 72-106 70-104 (141)
387 3t8b_A 1,4-dihydroxy-2-naphtho 33.1 66 0.0023 32.9 6.6 23 204-227 89-111 (334)
388 3rrv_A Enoyl-COA hydratase/iso 32.9 51 0.0017 32.7 5.5 54 204-258 60-136 (276)
389 1mio_B Nitrogenase molybdenum 32.9 1.2E+02 0.0042 32.1 9.0 150 88-250 87-264 (458)
390 4eml_A Naphthoate synthase; 1, 32.6 70 0.0024 31.6 6.5 52 204-258 42-123 (275)
391 3egc_A Putative ribose operon 32.6 1.9E+02 0.0064 27.5 9.7 80 160-244 124-211 (291)
392 2qyt_A 2-dehydropantoate 2-red 32.6 15 0.00053 36.4 1.6 37 72-110 83-122 (317)
393 3i47_A Enoyl COA hydratase/iso 32.6 45 0.0015 32.9 5.0 54 204-258 36-113 (268)
394 4di1_A Enoyl-COA hydratase ECH 32.5 52 0.0018 32.7 5.5 54 204-258 55-129 (277)
395 4hdt_A 3-hydroxyisobutyryl-COA 32.5 78 0.0027 32.6 7.0 54 204-258 41-119 (353)
396 1mvo_A PHOP response regulator 32.2 2.1E+02 0.007 23.4 8.8 113 162-309 4-120 (136)
397 2p5y_A UDP-glucose 4-epimerase 32.2 1.7E+02 0.0057 28.4 9.3 93 11-107 2-118 (311)
398 3sll_A Probable enoyl-COA hydr 32.2 63 0.0021 32.2 6.1 54 204-258 56-137 (290)
399 3h5t_A Transcriptional regulat 31.9 2.9E+02 0.0098 27.4 11.3 116 107-250 35-157 (366)
400 3ilh_A Two component response 31.7 2.2E+02 0.0074 23.4 9.0 116 162-309 10-138 (146)
401 2a7k_A CARB; crotonase, antibi 31.6 34 0.0012 33.2 3.9 53 205-258 33-108 (250)
402 3ghy_A Ketopantoate reductase 31.3 1E+02 0.0034 31.0 7.6 91 9-108 3-107 (335)
403 4do7_A Amidohydrolase 2; enzym 31.2 53 0.0018 32.6 5.4 45 80-124 30-74 (303)
404 3c1o_A Eugenol synthase; pheny 30.8 86 0.003 30.7 6.9 25 10-34 5-32 (321)
405 3k4h_A Putative transcriptiona 30.8 2.9E+02 0.01 26.0 10.7 173 60-246 32-219 (292)
406 3n53_A Response regulator rece 30.7 2.2E+02 0.0077 23.4 8.9 115 163-310 5-122 (140)
407 1tg6_A Putative ATP-dependent 30.7 44 0.0015 33.4 4.6 64 191-257 84-153 (277)
408 2q1s_A Putative nucleotide sug 30.3 1.2E+02 0.0041 30.6 8.1 20 87-106 131-151 (377)
409 3ko8_A NAD-dependent epimerase 30.2 1.8E+02 0.006 28.1 9.1 20 87-106 94-113 (312)
410 3lao_A Enoyl-COA hydratase/iso 30.1 17 0.00059 35.6 1.5 54 204-258 44-119 (258)
411 1tmy_A CHEY protein, TMY; chem 30.1 1.1E+02 0.0037 24.5 6.4 79 163-251 4-82 (120)
412 1qyd_A Pinoresinol-lariciresin 29.9 1.2E+02 0.0041 29.4 7.8 25 10-34 5-32 (313)
413 2ej5_A Enoyl-COA hydratase sub 29.9 80 0.0027 30.7 6.3 54 204-258 35-108 (257)
414 3qk8_A Enoyl-COA hydratase ECH 29.8 65 0.0022 31.7 5.7 54 204-258 45-121 (272)
415 3lke_A Enoyl-COA hydratase; ny 29.4 55 0.0019 32.1 5.0 54 204-258 36-115 (263)
416 3qy9_A DHPR, dihydrodipicolina 29.3 68 0.0023 31.2 5.7 117 163-309 5-121 (243)
417 3rhg_A Putative phophotriester 29.3 51 0.0018 34.2 5.0 41 86-128 78-120 (365)
418 1pii_A N-(5'phosphoribosyl)ant 29.2 1E+02 0.0034 33.1 7.3 188 88-310 122-329 (452)
419 1srr_A SPO0F, sporulation resp 29.1 2E+02 0.0069 23.0 8.0 77 163-250 5-81 (124)
420 3h5i_A Response regulator/sens 29.0 2.4E+02 0.0084 23.2 11.1 120 162-312 6-126 (140)
421 2gas_A Isoflavone reductase; N 28.8 1.2E+02 0.0042 29.2 7.6 26 10-35 3-31 (307)
422 2jl1_A Triphenylmethane reduct 28.6 53 0.0018 31.6 4.8 90 11-107 2-108 (287)
423 1xq6_A Unknown protein; struct 28.6 75 0.0026 29.6 5.7 20 87-106 114-133 (253)
424 1nzy_A Dehalogenase, 4-chlorob 28.4 78 0.0027 31.0 6.0 54 204-258 35-114 (269)
425 2jba_A Phosphate regulon trans 28.4 1.7E+02 0.0058 23.5 7.4 79 163-252 4-84 (127)
426 1ek6_A UDP-galactose 4-epimera 28.3 1.8E+02 0.0061 28.6 8.8 25 10-35 3-31 (348)
427 1sb8_A WBPP; epimerase, 4-epim 28.2 1.6E+02 0.0055 29.2 8.5 27 8-35 26-56 (352)
428 1y1p_A ARII, aldehyde reductas 28.1 2.5E+02 0.0086 27.2 9.9 27 7-34 9-39 (342)
429 1jbe_A Chemotaxis protein CHEY 28.1 2.3E+02 0.008 22.7 8.9 114 163-310 6-125 (128)
430 1uiy_A Enoyl-COA hydratase; ly 28.0 73 0.0025 30.9 5.6 16 243-258 93-108 (253)
431 1szo_A 6-oxocamphor hydrolase; 28.0 76 0.0026 31.0 5.8 54 204-258 48-122 (257)
432 1jx6_A LUXP protein; protein-l 27.9 2.9E+02 0.01 26.9 10.4 111 109-250 15-134 (342)
433 3op7_A Aminotransferase class 27.8 1.3E+02 0.0046 29.8 7.8 74 57-132 112-195 (375)
434 3l3s_A Enoyl-COA hydratase/iso 27.7 46 0.0016 32.7 4.1 54 204-258 38-118 (263)
435 3crn_A Response regulator rece 27.7 2.1E+02 0.0072 23.4 8.0 112 163-309 5-120 (132)
436 3lte_A Response regulator; str 27.7 2.4E+02 0.0083 22.7 9.8 115 161-310 6-125 (132)
437 2ayx_A Sensor kinase protein R 27.6 2.3E+02 0.008 26.7 9.3 115 161-310 129-247 (254)
438 3qwd_A ATP-dependent CLP prote 27.3 49 0.0017 31.4 4.1 63 191-257 29-98 (203)
439 3a06_A 1-deoxy-D-xylulose 5-ph 27.3 95 0.0032 32.4 6.5 52 72-128 85-139 (376)
440 1gd9_A Aspartate aminotransfer 27.2 1.4E+02 0.0048 29.8 7.9 72 55-128 116-197 (389)
441 2pln_A HP1043, response regula 27.2 2.6E+02 0.0088 22.9 8.9 77 159-251 16-93 (137)
442 1qyc_A Phenylcoumaran benzylic 27.1 1.2E+02 0.0041 29.3 7.1 25 10-34 5-32 (308)
443 3hrx_A Probable enoyl-COA hydr 27.0 1E+02 0.0034 29.9 6.5 54 204-258 32-105 (254)
444 4fzw_A 2,3-dehydroadipyl-COA h 27.0 1.1E+02 0.0038 29.7 6.8 54 204-258 37-109 (258)
445 3pea_A Enoyl-COA hydratase/iso 26.9 84 0.0029 30.7 5.9 54 204-258 37-112 (261)
446 3snk_A Response regulator CHEY 26.8 84 0.0029 26.1 5.2 80 161-251 14-94 (135)
447 2z1m_A GDP-D-mannose dehydrata 26.7 1.6E+02 0.0055 28.8 8.1 95 10-106 4-127 (345)
448 2d6f_A Glutamyl-tRNA(Gln) amid 26.6 1.8E+02 0.0061 31.0 8.7 85 199-304 310-397 (435)
449 3g0t_A Putative aminotransfera 26.6 1E+02 0.0036 31.4 6.9 75 58-133 141-224 (437)
450 3gbv_A Putative LACI-family tr 26.6 4.1E+02 0.014 25.0 11.4 217 60-314 28-271 (304)
451 3sxp_A ADP-L-glycero-D-mannohe 26.5 2.1E+02 0.0071 28.5 9.0 29 7-36 8-42 (362)
452 2lnd_A De novo designed protei 26.4 1.3E+02 0.0044 24.3 5.7 60 231-310 37-101 (112)
453 3t8y_A CHEB, chemotaxis respon 26.4 1.6E+02 0.0055 25.4 7.3 81 161-251 25-105 (164)
454 3kcn_A Adenylate cyclase homol 26.3 2.9E+02 0.0098 23.1 13.1 113 163-310 6-123 (151)
455 3vnd_A TSA, tryptophan synthas 26.3 3.2E+02 0.011 26.8 10.1 99 22-126 37-150 (267)
456 3db2_A Putative NADPH-dependen 26.2 3.1E+02 0.011 27.4 10.3 87 203-316 57-143 (354)
457 3trr_A Probable enoyl-COA hydr 26.2 70 0.0024 31.2 5.2 54 204-258 39-107 (256)
458 4d9a_A 2-pyrone-4,6-dicarbaxyl 26.2 4.3E+02 0.015 25.9 11.2 134 80-255 50-184 (303)
459 1yio_A Response regulatory pro 26.1 1.9E+02 0.0064 26.0 7.9 80 161-251 4-83 (208)
460 3fdb_A Beta C-S lyase, putativ 25.8 1.6E+02 0.0055 29.1 8.0 74 57-132 112-191 (377)
461 1fjh_A 3alpha-hydroxysteroid d 25.8 1.9E+02 0.0064 27.1 8.1 24 11-34 2-29 (257)
462 3moy_A Probable enoyl-COA hydr 25.5 75 0.0026 31.1 5.2 54 204-258 42-114 (263)
463 3rsi_A Putative enoyl-COA hydr 25.5 55 0.0019 32.1 4.3 54 204-258 41-116 (265)
464 2hjs_A USG-1 protein homolog; 25.5 1E+02 0.0036 31.4 6.5 36 72-109 68-103 (340)
465 1ys7_A Transcriptional regulat 25.5 2.8E+02 0.0097 25.1 9.2 117 162-310 8-125 (233)
466 3h2s_A Putative NADH-flavin re 25.4 1E+02 0.0034 28.3 5.9 23 11-34 2-28 (224)
467 2gn4_A FLAA1 protein, UDP-GLCN 25.2 1.8E+02 0.0062 29.0 8.3 96 5-106 17-142 (344)
468 1ef8_A Methylmalonyl COA decar 25.2 45 0.0015 32.6 3.5 16 243-258 95-110 (261)
469 1req_A Methylmalonyl-COA mutas 25.1 95 0.0032 35.3 6.5 57 72-132 647-708 (727)
470 3slg_A PBGP3 protein; structur 24.9 1.9E+02 0.0065 28.8 8.4 26 8-34 23-53 (372)
471 1oc2_A DTDP-glucose 4,6-dehydr 24.8 4.4E+02 0.015 25.6 11.1 24 11-34 5-34 (348)
472 4fzw_C 1,2-epoxyphenylacetyl-C 24.8 76 0.0026 31.3 5.1 54 204-258 47-125 (274)
473 4fgw_A Glycerol-3-phosphate de 24.7 48 0.0017 34.8 3.8 49 56-108 104-154 (391)
474 3c3k_A Alanine racemase; struc 24.6 3.7E+02 0.013 25.3 10.2 80 160-246 123-211 (285)
475 2bll_A Protein YFBG; decarboxy 24.6 3.1E+02 0.011 26.6 9.9 18 88-106 100-117 (345)
476 3p2l_A ATP-dependent CLP prote 24.4 60 0.002 30.8 4.1 63 191-257 32-101 (201)
477 3dzz_A Putative pyridoxal 5'-p 24.4 1.3E+02 0.0045 29.9 7.0 73 57-132 116-201 (391)
478 4dqv_A Probable peptide synthe 24.3 1.5E+02 0.0051 31.4 7.7 41 63-106 161-214 (478)
479 2jk1_A HUPR, hydrogenase trans 24.3 3E+02 0.01 22.6 10.0 112 163-309 3-118 (139)
480 2ioj_A Hypothetical protein AF 24.2 64 0.0022 28.2 4.0 49 79-131 57-105 (139)
481 2a35_A Hypothetical protein PA 24.1 3.8E+02 0.013 23.9 9.7 35 73-107 66-115 (215)
482 3nxk_A Cytoplasmic L-asparagin 24.1 1.8E+02 0.0061 29.7 7.9 77 204-304 234-312 (334)
483 1k68_A Phytochrome response re 24.0 2.8E+02 0.0097 22.3 14.8 121 162-314 3-135 (140)
484 3njd_A Enoyl-COA hydratase; ss 23.8 82 0.0028 32.0 5.3 22 204-225 67-88 (333)
485 3k9c_A Transcriptional regulat 23.7 4.7E+02 0.016 24.7 11.5 172 60-246 30-212 (289)
486 1dci_A Dienoyl-COA isomerase; 23.7 1.2E+02 0.0039 29.8 6.2 16 243-258 106-121 (275)
487 2ekc_A AQ_1548, tryptophan syn 23.6 3.7E+02 0.013 26.0 9.9 39 87-127 112-150 (262)
488 2j5g_A ALR4455 protein; enzyme 23.6 93 0.0032 30.5 5.5 69 204-275 56-146 (263)
489 2r6j_A Eugenol synthase 1; phe 23.5 1.6E+02 0.0055 28.7 7.4 24 11-34 13-39 (318)
490 1n7h_A GDP-D-mannose-4,6-dehyd 23.5 1.3E+02 0.0043 30.4 6.7 25 11-35 29-57 (381)
491 1i3c_A Response regulator RCP1 23.4 3.2E+02 0.011 22.8 8.9 118 162-311 9-138 (149)
492 2pbp_A Enoyl-COA hydratase sub 23.4 96 0.0033 30.1 5.5 54 204-258 37-109 (258)
493 3t3w_A Enoyl-COA hydratase; ss 23.4 76 0.0026 31.4 4.8 54 204-258 52-131 (279)
494 1zgz_A Torcad operon transcrip 23.3 2.8E+02 0.0095 22.0 9.1 112 163-310 4-119 (122)
495 1sg4_A 3,2-trans-enoyl-COA iso 23.3 66 0.0022 31.4 4.3 54 204-258 36-111 (260)
496 2dgd_A 223AA long hypothetical 23.2 91 0.0031 29.4 5.2 63 73-136 67-145 (223)
497 1uzm_A 3-oxoacyl-[acyl-carrier 23.1 3.1E+02 0.011 25.7 9.1 23 12-34 17-43 (247)
498 2pl1_A Transcriptional regulat 22.9 2.8E+02 0.0096 21.8 9.4 112 164-310 3-118 (121)
499 2uzf_A Naphthoate synthase; ly 22.9 1.1E+02 0.0038 30.0 6.0 24 233-258 98-121 (273)
500 3cfy_A Putative LUXO repressor 22.8 2.1E+02 0.007 23.7 7.0 113 163-310 6-122 (137)
No 1
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=100.00 E-value=2.5e-72 Score=588.53 Aligned_cols=322 Identities=52% Similarity=0.877 Sum_probs=282.7
Q ss_pred cCCCCCCCcEEEEeeCCcHHHHHHHhcC-------CeEEEEEeCCCCCC-ccccccCceeecccccCCHHHHhhcCCCcc
Q 007482 3 TGQLFSKTTQALFYNYKQLPIQRMLDFD-------FLCVAGIINPGAEG-FQKLFFGQEEIAIPVHSTVEAACAAHPMAD 74 (602)
Q Consensus 3 ~~~l~~p~s~avv~g~~~~~~~~~~~~g-------~~~V~gv~~p~~~~-~~~~~~g~~v~G~~~y~sv~~i~~~~p~vD 74 (602)
+..||+|++++||+|++|+++++|+++| +++|++|+ |++++ .++.+||.+..|+|||+|++|++++.|++|
T Consensus 3 ~~~l~~~~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~-P~~~g~~~~v~~G~~~~Gvpvy~sv~ea~~~~p~~D 81 (334)
T 3mwd_B 3 STTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVY-PFTGDHKQKFYWGHKEILIPVFKNMADAMRKHPEVD 81 (334)
T ss_dssp CSCCCCTTCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEEC-TTSCSEEEEEEETTEEEEEEEESSHHHHHHHCTTCC
T ss_pred cccccCCCCeEEEECCchHHHHHHHHhcccccCCCceEEEEEc-CCCCCccceEeccCccCCceeeCCHHHHhhcCCCCc
Confidence 3589999999999999999999999997 67899996 97653 456678888899999999999987655689
Q ss_pred EEEEecCChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCcccccccCcccccccCCcccccc
Q 007482 75 VFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNII 154 (602)
Q Consensus 75 lavi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~~~~~~~l~~~~~~~~~~~ 154 (602)
++||+||++.+.++++|+|.++|+|.+||||+||+|.++++|+++||++|+||+||||+|++||+.+++|+++++|.+.+
T Consensus 82 laVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G~~e~~~~~l~~~a~~~g~rliGPNc~Gii~p~~~~ig~~~~~~~a~~ 161 (334)
T 3mwd_B 82 VLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNIL 161 (334)
T ss_dssp EEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTCEEECSSCCCEEETTTEECTTTTCSHHHHH
T ss_pred EEEEecCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEccCCccccCcchhhcccccccccccc
Confidence 99999999987899999999999999999999999999999999999999999999999999998767765556777677
Q ss_pred cccCCCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHH
Q 007482 155 HCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 234 (602)
Q Consensus 155 p~~~~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f 234 (602)
|...++||+||+|||||++++++++|+.++|+|||++||+||+.+.|+++.|+|+||.+||+||+|+||+|++...+++|
T Consensus 162 ~~~~~~~G~vgivSqSG~l~~~i~~~~~~~g~G~S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e~~~ 241 (334)
T 3mwd_B 162 ASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKI 241 (334)
T ss_dssp HTTTTSCCSEEEEESCHHHHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHHHHH
T ss_pred cccCCCCCCEEEEeCchHHHHHHHHHHHhcCCCeEEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHHHHH
Confidence 77778999999999999999999999999999999999999994459999999999999999999999977666666999
Q ss_pred HHHHHhcCCCCCEEEEEeCcCcc--CccccccccccCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHhHh
Q 007482 235 VEALKQGKVNKPVVAWVSGTCAR--LFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLV 312 (602)
Q Consensus 235 ~~~~r~~~~~KPVv~~k~Gr~~~--g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~~~~~ 312 (602)
++++|+.+++||||+||+||++. | +++++|||||++|++.+|+++|+++|||+|++|++|++||+++++.++++|+
T Consensus 242 ~~~~r~~~~~KPVV~~kaGrs~~~~g--~~aa~sHtGalag~~~~~a~~~~aa~~~aGv~~v~~~~el~~~~~~~~~~l~ 319 (334)
T 3mwd_B 242 CRGIKEGRLTKPIVCWCIGTCATMFS--SEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDLV 319 (334)
T ss_dssp HHHHHTTSCCSCEEEEEECTTCC------------------CGGGSHHHHHHHHHHTTCBCCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCEEEEEcCCCccccc--ccccccchhhhccCCCccHHHHHHHHHHcCCeEcCCHHHHHHHHHHHHHHHH
Confidence 99999988999999999999998 7 8999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCCCCCC
Q 007482 313 EEGKIPPVKEVTPPQ 327 (602)
Q Consensus 313 ~~g~~~~~~~~~~~~ 327 (602)
.+|+|.+..|.++|.
T Consensus 320 ~~~~~~~~~~~~~~~ 334 (334)
T 3mwd_B 320 ANGVIVPAQEVPPPT 334 (334)
T ss_dssp HTTSCCCCCCCCCCC
T ss_pred HCCcEeeCCCCCCCC
Confidence 999999999998764
No 2
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.6e-66 Score=591.41 Aligned_cols=316 Identities=50% Similarity=0.821 Sum_probs=270.6
Q ss_pred CCCCCCcEEEEeeCCcHHHHHHHhcC-------CeEEEEEeCCCCCC-ccccccCceeecccccCCHHHHhhcCCCccEE
Q 007482 5 QLFSKTTQALFYNYKQLPIQRMLDFD-------FLCVAGIINPGAEG-FQKLFFGQEEIAIPVHSTVEAACAAHPMADVF 76 (602)
Q Consensus 5 ~l~~p~s~avv~g~~~~~~~~~~~~g-------~~~V~gv~~p~~~~-~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDla 76 (602)
+||++++++||+|++|+++++|++|| ..+|++|+ |++++ +++++||.+..|+|||+||+|+++.+|++|++
T Consensus 491 ~l~~~~trviV~G~tg~~~~~ml~~~~~~~~~~~~vVa~V~-P~~~g~~~~~~~G~~~~Gvp~y~sv~ea~~~~p~~Dla 569 (829)
T 3pff_A 491 TLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVY-PFTGDHKQKFYWGHKEILIPVFKNMADAMRKHPEVDVL 569 (829)
T ss_dssp CCCCTTCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEEC-TTSCSEEEEEEETTEEEEEEEESSHHHHHHHCTTCCEE
T ss_pred eeecCCCeEEEECCcHHHHHHHHHhcccccCCCCcEEEEEc-CCCCCccceEEecCCcCCcccCCcHHHHhhccCCCcEE
Confidence 78999999999999999999999988 56798985 97664 78889999999999999999998765558999
Q ss_pred EEecCChhhHHHHHHHhhC-CCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCcccccccCcccccccCCccccccc
Q 007482 77 INFSSFRSAAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIH 155 (602)
Q Consensus 77 vi~vp~~~~~~~~~e~~~~-~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~~~~~~~l~~~~~~~~~~~p 155 (602)
||+||++. +.+++++|.+ +|||.+||||+||+|.++++|+++||++|+||+||||+|++||+.+++|+++++|.+.+|
T Consensus 570 VI~vP~~~-v~~av~ea~~~~Gvk~~Viis~Gf~e~~~~~l~~~A~~~g~rliGPNc~Gii~p~~~~ig~~~g~lna~~~ 648 (829)
T 3pff_A 570 INFASLRS-AYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILA 648 (829)
T ss_dssp EECCCTTT-HHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTCEEECSSCCCEEETTTEECTTTTCSHHHHHH
T ss_pred EEeCCHHH-HHHHHHHHHhhCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCEEEcCCCcccCccccccccccccccccccc
Confidence 99999986 6777888888 999999999999999999999999999999999999999999998677654556666667
Q ss_pred ccCCCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHH
Q 007482 156 CKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLV 235 (602)
Q Consensus 156 ~~~~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~ 235 (602)
...++||+||+|||||++++++++|+.++|+|||++||+||+.+.|+++.|+|+||.+||+|++|++|+|+ ++++|+
T Consensus 649 ~~~~~~G~VgiVSqSGal~~~i~~~~~~~g~G~S~~VsiGnd~~~d~~~~D~L~~l~~Dp~T~~Ivly~Ei---~g~~f~ 725 (829)
T 3pff_A 649 SKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEI---GGTEEY 725 (829)
T ss_dssp TTTTSCCSEEEEESCHHHHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEES---SSSHHH
T ss_pred cccCCCCcEEEEechhHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCCHHHHHHHHhhCCCCCEEEEEEec---CchHHH
Confidence 66789999999999999999999999999999999999999966699999999999999999999999994 466788
Q ss_pred HHHHhc---CCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHhHh
Q 007482 236 EALKQG---KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLV 312 (602)
Q Consensus 236 ~~~r~~---~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~~~~~ 312 (602)
+++|++ +++||||++|+|||+.++++++++|||||++|++.+|+++|+++|||+|++|++|++||+++++.++.+|+
T Consensus 726 ~aA~~~~~~~~~KPVVa~kaGrsa~~~~~~~~~sHtGAlag~~~~ta~~~~aa~r~aGvi~v~~~~el~~~~~~~~~~l~ 805 (829)
T 3pff_A 726 KICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDLV 805 (829)
T ss_dssp HHHHHHHTTSCCSCEEEEEECSSTTC---------------CGGGSHHHHHHHHHHTTCBCCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCEEEEEecCcCcccccccccccccccccCCcccHHHHHHHHHHcCCeEcCCHHHHHHHHHHHHHHHH
Confidence 887776 58999999999999997666889999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCCCC
Q 007482 313 EEGKIPPVKEVTP 325 (602)
Q Consensus 313 ~~g~~~~~~~~~~ 325 (602)
.+|+|++..+.++
T Consensus 806 ~~~~~~~~~~~~~ 818 (829)
T 3pff_A 806 ANGVIVPAQEVPA 818 (829)
T ss_dssp HTTSCCC------
T ss_pred HCCcEeeCCCCCc
Confidence 9999999888743
No 3
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=100.00 E-value=3.3e-62 Score=507.46 Aligned_cols=286 Identities=29% Similarity=0.457 Sum_probs=236.5
Q ss_pred cCCCCCCCcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007482 3 TGQLFSKTTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 78 (602)
Q Consensus 3 ~~~l~~p~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi 78 (602)
.+.||+|+++++|.|++++ ++++|+++||+.|++|+ |++.+ +++.|+|||+|++|++++.+++|++|+
T Consensus 6 ~~~l~~~~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~Vn-P~~~g-------~~i~G~~vy~sl~el~~~~~~~DvaIi 77 (297)
T 2yv2_A 6 MAVLVDSETRVLVQGITGREGSFHAKAMLEYGTKVVAGVT-PGKGG-------SEVHGVPVYDSVKEALAEHPEINTSIV 77 (297)
T ss_dssp ---CCSTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC-TTCTT-------CEETTEEEESSHHHHHHHCTTCCEEEE
T ss_pred hhHhhCCCCEEEEECCCCCHHHHHHHHHHhCCCcEEEEeC-CCCCC-------ceECCEeeeCCHHHHhhcCCCCCEEEE
Confidence 3679999999999888776 89999999999889997 86532 578999999999998763313899999
Q ss_pred ecCChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCcccccccCcccccccCCcccccccccC
Q 007482 79 FSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKL 158 (602)
Q Consensus 79 ~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~~~~~~~l~~~~~~~~~~~p~~~ 158 (602)
++|++. +.+++++|.++|+|.+|++|+||+|+++++|+++|+++|+|++||||+|++||+. .+ ++++. ...
T Consensus 78 ~vp~~~-~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~viGPNc~Gii~~~~-~~---~~~~~----~~~ 148 (297)
T 2yv2_A 78 FVPAPF-APDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGATIIGPNCPGAITPGQ-AK---VGIMP----GHI 148 (297)
T ss_dssp CCCGGG-HHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSSSCEEEETTT-EE---EESCC----GGG
T ss_pred ecCHHH-HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEcCCCCeeEcccc-cc---eeecc----cCC
Confidence 999975 7788888888999999999999999999999999999999999999999999987 44 34432 234
Q ss_pred CCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHH
Q 007482 159 YRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEAL 238 (602)
Q Consensus 159 ~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~ 238 (602)
++||+||||||||++++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+||+|++|+| +++++++|.+..
T Consensus 149 ~~~G~va~vSqSG~l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l~~E-~~~~~~~~~~~~ 227 (297)
T 2yv2_A 149 FKEGGVAVVSRSGTLTYEISYMLTRQGIGQSTVIGIGGDPIVGLSFTEALKLFQEDPQTEALVLIGE-IGGDMEERAAEM 227 (297)
T ss_dssp CCEEEEEEEESCHHHHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEEEEC-SSSSHHHHHHHH
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHHcCCCeeEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEe-eCCCHHHHHHHH
Confidence 5899999999999999999999999999999999999999778899999999999999999999999 999988877666
Q ss_pred Hhc-CCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHHH
Q 007482 239 KQG-KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFE 309 (602)
Q Consensus 239 r~~-~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~~ 309 (602)
.++ +++||||++|+||+++. .+ ++||||++++...+++++|+++|||+|++|++|++||+++++.++.
T Consensus 228 ~~~~~~~KPVv~~k~G~s~~~--~~-~~sHtgal~~~~~g~~~~~~aa~~~aGv~~v~~~~el~~~~~~~~~ 296 (297)
T 2yv2_A 228 IKKGEFTKPVIAYIAGRTAPP--EK-RMGHAGAIIMMGTGTYEGKVKALREAGVEVAETPFEVPELVRKALR 296 (297)
T ss_dssp HHTTSCCSCEEEEESCCC---------------------CSHHHHHHHHHTTTCEEESSGGGHHHHHHHHC-
T ss_pred HHhccCCCCEEEEEeCCCCcc--cc-ccCCccccccCCCCCHHHHHHHHHHcCCeEeCCHHHHHHHHHHHhh
Confidence 554 58999999999999943 23 3899999996555666999999999999999999999999998763
No 4
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=100.00 E-value=8.5e-62 Score=505.77 Aligned_cols=285 Identities=27% Similarity=0.417 Sum_probs=253.5
Q ss_pred cCCCCCCCcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007482 3 TGQLFSKTTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 78 (602)
Q Consensus 3 ~~~l~~p~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi 78 (602)
.+.||+|+++|||.|++++ ++++|+++||+.|++|+ |++.+ +++.|+|||+|++|++++. ++|+++|
T Consensus 7 ~~~l~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~Vn-P~~~g-------~~i~G~~vy~sl~el~~~~-~vD~avI 77 (305)
T 2fp4_A 7 KHLYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTT-PGKGG-------KTHLGLPVFNTVKEAKEQT-GATASVI 77 (305)
T ss_dssp GGGCCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC-TTCTT-------CEETTEEEESSHHHHHHHH-CCCEEEE
T ss_pred HHHHhCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeC-CCcCc-------ceECCeeeechHHHhhhcC-CCCEEEE
Confidence 3579999999999787665 88999999999888997 96542 5899999999999997643 3899999
Q ss_pred ecCChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhC-CCeeEcCCcccccccCcccccccCCccccccccc
Q 007482 79 FSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSN-NKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCK 157 (602)
Q Consensus 79 ~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~-g~riiGPNc~G~~~~~~~~l~~~~~~~~~~~p~~ 157 (602)
++|++. +++++++|.++|+|.++++++||++.+++++++.|+++ |+|++||||+|+++|.. .+ ++++ |..
T Consensus 78 ~vP~~~-~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~liGPnc~Gii~p~~-~~---~~~~----~~~ 148 (305)
T 2fp4_A 78 YVPPPF-AAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLIGPNCPGVINPGE-CK---IGIM----PGH 148 (305)
T ss_dssp CCCHHH-HHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCEEECSSSCEEEETTT-EE---EESS----CGG
T ss_pred ecCHHH-HHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcEEEeCCCCeEecccc-cc---eeec----ccc
Confidence 999975 67788888889999999999999998889999999999 99999999999999998 44 3333 333
Q ss_pred CCCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCc----HHH
Q 007482 158 LYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRD----EYS 233 (602)
Q Consensus 158 ~~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~----~~~ 233 (602)
.++||+||+|||||++++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+||+|++|+| ++++ +++
T Consensus 149 ~~~~G~va~vSqSG~l~~~~~~~~~~~g~G~S~~vs~G~~~~~~~~~~d~l~~~~~Dp~T~~I~l~~E-~~g~~e~~~~~ 227 (305)
T 2fp4_A 149 IHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGE-IGGNAEENAAE 227 (305)
T ss_dssp GCCEEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCSSSSCSCCHHHHHHHHHHCTTCCEEEEEEE-SSSSHHHHHHH
T ss_pred CCCCCCEEEEecchHHHHHHHHHHHhcCCCeeEEeccCCCcCCCCCHHHHHHHHhcCCCCcEEEEEEe-cCCchhhHHHH
Confidence 45899999999999999999999999999999999999998778999999999999999999999999 7754 789
Q ss_pred HHHHHHhcCCCCCEEEEEeCcCc-cCccccccccccCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHh
Q 007482 234 LVEALKQGKVNKPVVAWVSGTCA-RLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEK 310 (602)
Q Consensus 234 f~~~~r~~~~~KPVv~~k~Gr~~-~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~~~ 310 (602)
|++++++++++||||++|+||++ .| ++ +||||++++...+++++|+++|||+|++++++++||+++++.++.+
T Consensus 228 f~~~~~~~~~~KPVv~~k~G~s~~~g--~~--~~Htgal~~~~~g~~~~~~aa~~~aGv~~v~~~~el~~~~~~~~~~ 301 (305)
T 2fp4_A 228 FLKQHNSGPKSKPVVSFIAGLTAPPG--RR--MGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYKEFEK 301 (305)
T ss_dssp HHHHHSCSTTCCCEEEEEECTTCCTT--CC--CSSTTCCCBTTBCCHHHHHHHHHHTTCEECSSTTCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEEecCCcccc--cc--ccchhhhhccCCccHHHHHHHHHHCCCeEeCCHHHHHHHHHHHHHh
Confidence 99998886689999999999999 45 43 8999999966666679999999999999999999999999998863
No 5
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=2e-61 Score=500.93 Aligned_cols=283 Identities=26% Similarity=0.400 Sum_probs=234.3
Q ss_pred cCCCCCCCcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007482 3 TGQLFSKTTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 78 (602)
Q Consensus 3 ~~~l~~p~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi 78 (602)
.+.||+|+++++|.|++++ ++++|+++||+.|++|+ |++.+ +++.|+|||+|++|++++. ++|++|+
T Consensus 6 l~~l~~~~~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~Vn-P~~~g-------~~i~G~~vy~sl~el~~~~-~~Dv~ii 76 (294)
T 2yv1_A 6 KMILLDENTKAIVQGITGRQGSFHTKKMLECGTKIVGGVT-PGKGG-------QNVHGVPVFDTVKEAVKET-DANASVI 76 (294)
T ss_dssp -CCSSCTTCCEEEETTTSHHHHHHHHHHHHTTCCEEEEEC-TTCTT-------CEETTEEEESSHHHHHHHH-CCCEEEE
T ss_pred HHHHhCCCCEEEEECCCCCHHHHHHHHHHhCCCeEEEEeC-CCCCC-------ceECCEeeeCCHHHHhhcC-CCCEEEE
Confidence 3679999999999888776 89999999999888997 86532 5789999999999987643 3899999
Q ss_pred ecCChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCcccccccCcccccccCCcccccccccC
Q 007482 79 FSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKL 158 (602)
Q Consensus 79 ~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~~~~~~~l~~~~~~~~~~~p~~~ 158 (602)
++|++. +.+++++|.++|+|.+|++|+||+|+++++|+++|+++|+|++||||+|++||.. .+ ++++ |...
T Consensus 77 ~vp~~~-~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~viGPNc~Gii~~~~-~~---~~~~----~~~~ 147 (294)
T 2yv1_A 77 FVPAPF-AKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGVKIIGPNTPGIASPKV-GK---LGII----PMEV 147 (294)
T ss_dssp CCCHHH-HHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEECSSCCEEEETTT-EE---EECC----CGGG
T ss_pred ccCHHH-HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEcCCCceeeccCc-ce---eeec----ccCC
Confidence 999975 6778888888999999999999999999999999999999999999999999988 44 3443 2234
Q ss_pred CCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHH-HHH
Q 007482 159 YRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL-VEA 237 (602)
Q Consensus 159 ~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f-~~~ 237 (602)
++||+||+|||||++++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+||+|++|+| +++++++| .+.
T Consensus 148 ~~~G~va~vSqSG~l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l~~E-~~g~~~~~~~~~ 226 (294)
T 2yv1_A 148 LKEGSVGMVSRSGTLTYEIAHQIKKAGFGVSTCVGIGGDPIVGLRYKEVLDLFEKDDETEAIVMIGE-IGGGAEEEAAKF 226 (294)
T ss_dssp CCEEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEEEEE-SSSSHHHHHHHH
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHhCCCCeEEEEeeCCCCCCCCCHHHHHHHHhcCCCCCEEEEEEe-eCCCHHHHHHHH
Confidence 5899999999999999999999999999999999999999888899999999999999999999999 99998875 334
Q ss_pred HHhcCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHHH
Q 007482 238 LKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFE 309 (602)
Q Consensus 238 ~r~~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~~ 309 (602)
+++ ++||||++|+||+++. .+ ++||||++++...+++++|+++|||+|++|+++++||+++++.++.
T Consensus 227 ~~~--~~KPVv~~k~G~~~~~--g~-~~sHtgal~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~~ 293 (294)
T 2yv1_A 227 IEK--MKKPVIGYIAGQSAPE--GK-RMGHAGAIVEKGKGTAESKMKALEEAGAYVAKNISDIPKLLAGILG 293 (294)
T ss_dssp HTT--CSSCEEEEEECC----------------------CCHHHHHHHHHHHTCEECSSTTHHHHHHHHHHC
T ss_pred HHh--CCCCEEEEEecCCCCc--cc-cCCchhhhccCCCCCHHHHHHHHHHCCCeEeCCHHHHHHHHHHHhc
Confidence 443 7999999999999943 23 3899999996555666999999999999999999999999998873
No 6
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=100.00 E-value=7e-61 Score=495.44 Aligned_cols=282 Identities=27% Similarity=0.436 Sum_probs=234.3
Q ss_pred CCCCCCcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007482 5 QLFSKTTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 80 (602)
Q Consensus 5 ~l~~p~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~v 80 (602)
-|++++++++|.|++++ ++++|+++||++|++|+ |++.+ +++.|+|||+|++|++++. ++|++|+++
T Consensus 2 ~~~~~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~Vn-P~~~g-------~~i~G~~vy~sl~el~~~~-~~Dv~Ii~v 72 (288)
T 1oi7_A 2 ILVNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVT-PGKGG-------MEVLGVPVYDTVKEAVAHH-EVDASIIFV 72 (288)
T ss_dssp CSCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC-TTCTT-------CEETTEEEESSHHHHHHHS-CCSEEEECC
T ss_pred eecCCCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEEC-CCCCC-------ceECCEEeeCCHHHHhhcC-CCCEEEEec
Confidence 47888887777788776 88999999999888997 86532 5789999999999997644 389999999
Q ss_pred CChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCcccccccCcccccccCCcccccccccCCC
Q 007482 81 SFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYR 160 (602)
Q Consensus 81 p~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~~~~~~~l~~~~~~~~~~~p~~~~~ 160 (602)
|++. +.+++++|.++|++.+|++|+||+++++++++++|+++|+|++||||+|++||.. .+ ++++. ...++
T Consensus 73 p~~~-~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~vigPNc~Gii~~~~-~~---~~~~~----~~~~~ 143 (288)
T 1oi7_A 73 PAPA-AADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSRLIGGNCPGIISAEE-TK---IGIMP----GHVFK 143 (288)
T ss_dssp CHHH-HHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEEESSSCEEEETTT-EE---EESSC----GGGCC
T ss_pred CHHH-HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEeCCCCeEEcCCC-ce---eEEcc----cCCCC
Confidence 9975 7788888888999999999999999999999999999999999999999999988 44 34432 23458
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHh
Q 007482 161 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 240 (602)
Q Consensus 161 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~ 240 (602)
||+||+|||||++++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+||+|++|+| +++++++|.+...+
T Consensus 144 ~G~va~vsqSG~l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~t~~I~l~~E-~~~~~~~~~~~~~~ 222 (288)
T 1oi7_A 144 RGRVGIISRSGTLTYEAAAALSQAGLGTTTTVGIGGDPVIGTTFKDLLPLFNEDPETEAVVLIGE-IGGSDEEEAAAWVK 222 (288)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHHTTCCEEEEEECCSSSCCSSCHHHHHHHHHTCTTCCEEEEEEC-SSSSHHHHHHHHHH
T ss_pred CCCEEEEECCHHHHHHHHHHHHhCCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEe-eCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999878899999999999999999999999 99998887765444
Q ss_pred cCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHH
Q 007482 241 GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETF 308 (602)
Q Consensus 241 ~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~ 308 (602)
++++||||++|+||+++. .++ +||||++++...+++++|+++|||+|++|+++++||+++++.++
T Consensus 223 ~~~~KPVv~~k~G~~~~~--~~~-~~Htgal~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~ 287 (288)
T 1oi7_A 223 DHMKKPVVGFIGGRSAPK--GKR-MGHAGAIIMGNVGTPESKLRAFAEAGIPVADTIDEIVELVKKAL 287 (288)
T ss_dssp HHCCSCEEEEESCC---------------------CCSHHHHHHHHHHHTCCBCSSHHHHHHHHHHHH
T ss_pred hcCCCCEEEEEecCCCCc--ccc-CcchhhcccCCCCCHHHHHHHHHHCCCeEeCCHHHHHHHHHHHh
Confidence 467999999999999943 233 89999999655566699999999999999999999999999876
No 7
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=100.00 E-value=1.8e-62 Score=537.74 Aligned_cols=331 Identities=16% Similarity=0.190 Sum_probs=273.7
Q ss_pred cCCCCCCCcEEEEeeC------CcHHHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEE
Q 007482 3 TGQLFSKTTQALFYNY------KQLPIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVF 76 (602)
Q Consensus 3 ~~~l~~p~s~avv~g~------~~~~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDla 76 (602)
+++||+|+|+||||.. +.++++||+++|...|++|+ |+. +++.|+|||+|++|+++ ++|++
T Consensus 2 l~~l~~p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVn-P~~---------~~i~G~~~y~sl~~lp~---~~Dla 68 (457)
T 2csu_A 2 LDYFFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVN-IKE---------EEVQGVKAYKSVKDIPD---EIDLA 68 (457)
T ss_dssp CCTTTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEEC-SSC---------SEETTEECBSSTTSCSS---CCSEE
T ss_pred hhHhcCCCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEEC-CCC---------CeECCEeccCCHHHcCC---CCCEE
Confidence 4789999999999542 22399999998733378887 863 58999999999999864 48999
Q ss_pred EEecCChhhHHHHHHHhhCCCCcEEEEecCCCCHH------HHHHHHHHHHhCCCeeEcCCcccccccCcccccccCCcc
Q 007482 77 INFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEA------DTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTI 150 (602)
Q Consensus 77 vi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~------~~~~l~~~a~~~g~riiGPNc~G~~~~~~~~l~~~~~~~ 150 (602)
+|++|++. +++++++|.++|+|.++++|+||+|. .+++++++|+++|+|++||||+|++||.. ++ +++|
T Consensus 69 vi~vp~~~-~~~~v~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~viGPnc~Gv~~~~~-~~---~~~~ 143 (457)
T 2csu_A 69 IIVVPKRF-VKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNCVGIMNTHV-DL---NATF 143 (457)
T ss_dssp EECSCHHH-HHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEECSSCCEEEEGGG-TE---EEES
T ss_pred EEecCHHH-HHHHHHHHHHcCCCEEEEecCCCCccccccHHHHHHHHHHHHHcCCEEEcCCcceEEccCC-Cc---eeee
Confidence 99999975 78888889999999999999999874 38999999999999999999999999998 66 5677
Q ss_pred cccccccCCCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCc
Q 007482 151 DNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRD 230 (602)
Q Consensus 151 ~~~~p~~~~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~ 230 (602)
.+..+ . |+||+|||||++++++++|+.++|+|||++||+||++ |+++.|+|+||.+||+||+|++|+| +++|
T Consensus 144 ~~~~~----~-G~v~~vsqSG~~~~~~~~~~~~~g~G~s~~vs~G~~~--~~~~~d~l~~~~~D~~t~~I~l~~E-~i~~ 215 (457)
T 2csu_A 144 ITVAK----K-GNVAFISQSGALGAGIVYKTIKEDIGFSKFISVGNMA--DVDFAELMEYLADTEEDKAIALYIE-GVRN 215 (457)
T ss_dssp SCCCE----E-CSEEEEESCHHHHHHHHHHHHHTTCEESEEEECTTCC--SSCHHHHHHHHTTCSSCCEEEEEES-CCSC
T ss_pred cCCCC----C-CCEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCCcC--CCCHHHHHHHHhcCCCCCEEEEEEe-cCCC
Confidence 54332 3 9999999999999999999999999999999999999 9999999999999999999999999 9999
Q ss_pred HHHHHHHHHhcCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHh
Q 007482 231 EYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEK 310 (602)
Q Consensus 231 ~~~f~~~~r~~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~~~ 310 (602)
+++|++++|+++++||||++|+||++.| +++++||||+++|++ .+|+++|||+|++++++++|+++..+.+..
T Consensus 216 ~~~f~~~a~~~~~~KPVv~~k~G~~~~g--~~aa~~Htgalag~~----~~~~AafRqaGv~~v~~~~El~~~~~~l~~- 288 (457)
T 2csu_A 216 GKKFMEVAKRVTKKKPIIALKAGKSESG--ARAASSHTGSLAGSW----KIYEAAFKQSGVLVANTIDEMLSMARAFSQ- 288 (457)
T ss_dssp HHHHHHHHHHHHHHSCEEEEECC--------------------CH----HHHHHHHHHTTCEEESSHHHHHHHHTTTTS-
T ss_pred HHHHHHHHHHhcCCCCEEEEEcCCCccc--cchhhcccCccCCcH----HHHHHHHHhCCCeEECCHHHHHHHHHHhcC-
Confidence 9999999999888999999999999999 999999999999998 999999999999999999999999988777
Q ss_pred Hhhc--CCCCCCCCCCCCCCCcchHHHhhcCcccCcHHHHHHHhhhcCCCcccCCCCCc
Q 007482 311 LVEE--GKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMS 367 (602)
Q Consensus 311 ~~~~--g~~~~~~~~~~~~~~~D~~~a~~~~Li~~~~~i~t~I~~~~g~~i~~rg~dL~ 367 (602)
..+. +...+++.+++..+..|.....++.+..+++.....+....+.... +.++++
T Consensus 289 ~~~~g~rvaiitngGG~~~laaD~~~~~Gl~l~~l~~~t~~~L~~~lp~~~~-~~NPlD 346 (457)
T 2csu_A 289 PLPRGNKVAIMTNAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAA-VKNPVD 346 (457)
T ss_dssp CCCSSSEEEEEESCHHHHHHHHHHHHTTTCEECCCCHHHHHHHHHHSCTTCE-ESSEEE
T ss_pred CCCCCCcEEEEECCHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHhCccccc-cCCCee
Confidence 4443 3455577777888889998888888888999999999888766554 566777
No 8
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=100.00 E-value=1.1e-58 Score=479.26 Aligned_cols=281 Identities=28% Similarity=0.414 Sum_probs=246.4
Q ss_pred CCCCCCcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007482 5 QLFSKTTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 80 (602)
Q Consensus 5 ~l~~p~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~v 80 (602)
-|++++++++|.|++|+ ++++|+++||++|++++ |++.+ +++.|+|+|+|++|++++. ++|+++|++
T Consensus 2 ~~~~~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~-p~~~g-------~~~~G~~vy~sl~el~~~~-~~D~viI~t 72 (288)
T 2nu8_A 2 ILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVT-PGKGG-------TTHLGLPVFNTVREAVAAT-GATASVIYV 72 (288)
T ss_dssp CSCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC-TTCTT-------CEETTEEEESSHHHHHHHH-CCCEEEECC
T ss_pred eecCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC-CCccc-------ceeCCeeccCCHHHHhhcC-CCCEEEEec
Confidence 47888887777788666 89999999999988987 86532 4789999999999987643 389999999
Q ss_pred CChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCcccccccCcccccccCCcccccccccCCC
Q 007482 81 SFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYR 160 (602)
Q Consensus 81 p~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~~~~~~~l~~~~~~~~~~~p~~~~~ 160 (602)
|+.. ..+++++|.++|++.+|++|+||+++++++|++.|+++|++++||||+|++||.. ++ ++++ |...++
T Consensus 73 P~~~-~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~liGPNc~Gi~~p~~-~~---~~~~----~~~~~~ 143 (288)
T 2nu8_A 73 PAPF-CKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNTPGVITPGE-CK---IGIQ----PGHIHK 143 (288)
T ss_dssp CGGG-HHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSSCCEEEETTT-EE---EESS----CTTSCC
T ss_pred CHHH-HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCcceecCCc-ce---eEec----ccCCCC
Confidence 9985 6777888888999999999999999999999999999999999999999999998 44 2322 333468
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHh
Q 007482 161 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 240 (602)
Q Consensus 161 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~ 240 (602)
||+||+|||||++++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+||+|++|+| +++++++|.+...+
T Consensus 144 ~G~i~~vsqSG~l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~l~~D~~t~~I~l~~E-~~~~~~~~~~~~~~ 222 (288)
T 2nu8_A 144 PGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGE-IGGSAEEEAAAYIK 222 (288)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEE-SSSSHHHHHHHHHH
T ss_pred CCCEEEEECcHHHHHHHHHHHHhcCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEe-eCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888999999999999999999999999 99988877665544
Q ss_pred cCCCCCEEEEEeCcCc-cCccccccccccCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHH
Q 007482 241 GKVNKPVVAWVSGTCA-RLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETF 308 (602)
Q Consensus 241 ~~~~KPVv~~k~Gr~~-~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~ 308 (602)
++++||||++|+||++ .| ++ +||||++++...+++++|+++|||+|+++++|++||+++++.++
T Consensus 223 ~~~~KPVv~~k~G~~~~~g--~~--~~Htga~~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~ 287 (288)
T 2nu8_A 223 EHVTKPVVGYIAGVTAPKG--KR--MGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 287 (288)
T ss_dssp HHCCSCEEEEEECTTCCTT--CC--CSSTTCCCCTTCCCHHHHHHHHHHTTCEECSSGGGHHHHHHHHC
T ss_pred hcCCCCEEEEEeCCCCccc--cc--ccchhhhhccCCccHHHHHHHHHHCCCeEeCCHHHHHHHHHHHh
Confidence 4689999999999999 45 43 89999999766667799999999999999999999999998765
No 9
>2p2w_A Citrate synthase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; HET: FLC; 1.90A {Thermotoga maritima}
Probab=100.00 E-value=9.1e-52 Score=437.97 Aligned_cols=232 Identities=25% Similarity=0.360 Sum_probs=208.2
Q ss_pred hHHHhhcCcccCcHHHHHHHhh-hcCCCcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCC
Q 007482 332 LNTAIKSGKVRAPTHIISTISD-DRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPC 410 (602)
Q Consensus 332 ~~~a~~~~Li~~~~~i~t~I~~-~~g~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~ 410 (602)
+.++. +|++..+.++..+++ ..|.+++.+..+++ +.+||++|+ ++++ +.++++||++||||||||+|
T Consensus 112 ~~~a~--~lia~~p~i~a~~y~~~~g~~~i~p~~~l~-------~a~nfl~ml-~~~~--~~~~~~ld~~LvL~ADHg~N 179 (367)
T 2p2w_A 112 REKAI--RVASVFPTILAYYYRYSKGKELIRPRKDLS-------HVENFYYMM-FGER--NEKIRLLESAFILLMEQDIN 179 (367)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHTTCCCCCCCTTSC-------HHHHHHHHH-HSCC--CTTHHHHHHHHHHHSCCSSC
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHcCCCCCCCCCCCC-------HHHHHHHHh-cCCC--hHHHHHHHHHHhHhccCCCc
Confidence 34444 478889999888776 46888777888888 899999988 5655 67899999999999999999
Q ss_pred CccchheeeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhccccCHHHHHHHHHHcCCCcCCCCCCCCCCCC
Q 007482 411 VSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDN 489 (602)
Q Consensus 411 ~st~~a~r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~~ipGfGH~v~~~~~ 489 (602)
+|| |++|+++||++|+|+|++||++++ ||+||||++.|++||+++.+. ++++++|++.++++++|||||||+||.
T Consensus 180 aST-ftaRvvaSt~ad~ysavaagi~aL~GPlHGGAne~v~~ml~ei~~~-~~~~~~i~~~l~~~~~i~GfGHrVyk~-- 255 (367)
T 2p2w_A 180 AST-FAALVIASTLSDLYSCIVGALGALKGPLHGGASEKVPPMLEEIGSE-DRVEEFVQKCLKEKRKIMGFGHRVYKT-- 255 (367)
T ss_dssp HHH-HHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHHCSG-GGHHHHHHHHHHHTCCCTTBCCSSCSS--
T ss_pred hHH-HHHHHHHhcCccHHHHHHHHHHHccCCccCChHHHHHHHHHHhcCc-hhHHHHHHHHHHcCCccccCCccccCC--
Confidence 999 999999999999999999999999 999999999999999999876 689999999999999999999999985
Q ss_pred CcHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhc-cCCCccchhHHHHHHHHHHhhccCCCChHHHHHHHhhcchhhhH
Q 007482 490 RDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSK-ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLF 568 (602)
Q Consensus 490 ~DPRa~~L~~~~~~~~~~~~~~~~a~~ie~~~~~~-~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf 568 (602)
.|||+++|+++++++.+.++++++++++|+++.+. .++++||||||+|+++++||+|.++||+ +|
T Consensus 256 ~DPRa~~l~~~a~~~~~~~~~~~~a~~le~~~~~~~~k~l~pNVDf~sg~v~~~lGip~~~~t~--------------lF 321 (367)
T 2p2w_A 256 YDPRAVFLKRVLQEHFPDSKLFRIASKLEEYIVSNKIKNIYPNVDLYSSVLFEELGFPRNMFTA--------------LF 321 (367)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTGGGCCBCHHHHHHHHHHHTTCCGGGHHH--------------HH
T ss_pred CCCchHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHhCCChhhhhh--------------HH
Confidence 59999999999999855679999999999998653 3899999999999999999999999988 99
Q ss_pred HHHhhhhhhhhHHHhhh---hcCCCCCC
Q 007482 569 VLARSIGLIGHTFDQKR---LKQPLYRH 593 (602)
Q Consensus 569 ~~~R~~G~iAH~~Eq~~---~~~P~~r~ 593 (602)
+++|++||+|||+||+. ++||..+|
T Consensus 322 ai~R~~Gw~AH~~Eq~~~~~iiRP~~~Y 349 (367)
T 2p2w_A 322 ATARVVGWTAHVIEYVSDNKLIRPTSEY 349 (367)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCCCCC
T ss_pred HHhccccHHHHHHHHHhcCCccCccccc
Confidence 99999999999999984 34666666
No 10
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=100.00 E-value=1.6e-51 Score=435.14 Aligned_cols=234 Identities=23% Similarity=0.330 Sum_probs=211.1
Q ss_pred chHHHhhcCcccCcHHHHHHHhhh-cCCCcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCC
Q 007482 331 DLNTAIKSGKVRAPTHIISTISDD-RGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGP 409 (602)
Q Consensus 331 D~~~a~~~~Li~~~~~i~t~I~~~-~g~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~ 409 (602)
.++++.+ |+++.+.++..+++. .|.+++.+..+++ ..+||++|+ ++++|++.++++||++||+|||||+
T Consensus 110 ~~~~a~~--Lia~~p~i~a~~~~~~~g~~~i~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~Lvl~aDHg~ 179 (363)
T 2c6x_A 110 KTEEAIR--LIAITPSIIAYRKRWTRGEQAIAPSSQYG-------HVENYYYML-TGEQPSEAKKKALETYMILATEHGM 179 (363)
T ss_dssp CHHHHHH--HHHHHHHHHHHHHHHHTTCCCCCCCTTSC-------SHHHHHHHH-HSSCCCHHHHHHHHHHHHHHHCCSS
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHhcCCCCcCCCCCCC-------HHHHHHHHH-cCCCCCHHHHHHHHHHHHHhccCCC
Confidence 3455554 799899998888774 6888888888888 899999887 6888999999999999999999999
Q ss_pred CCccchheeeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhccccCHHHHHHHHHHcCCCcCCCCCCCCCCC
Q 007482 410 CVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGD 488 (602)
Q Consensus 410 ~~st~~a~r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~~ipGfGH~v~~~~ 488 (602)
|+|| |++|+++||++|+|+|++||++++ ||+||||++.|++||+++.+. ++++++|++.++++++|||||||+||.
T Consensus 180 n~St-~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~~~l~~i~~~-~~~~~~v~~~l~~~~~i~GfGHrvyk~- 256 (363)
T 2c6x_A 180 NAST-FSARVTLSTESDLVSAVTAALGTMKGPLHGGAPSAVTKMLEDIGEK-EHAEAYLKEKLEKGERLMGFGHRVYKT- 256 (363)
T ss_dssp CHHH-HHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHTCCSS-TTHHHHHHHHHHTTCCCTTBCCSSCSS-
T ss_pred cHHH-HHHHHHHhcCccHHHHHHHHHHHcccCccCCchHHHHHHHHHhCCh-hhHHHHHHHHHHcCCcccCCCCcccCC-
Confidence 9999 999999999999999999999999 999999999999999999765 689999999999999999999999985
Q ss_pred CCcHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhc-c-----CCCccchhHHHHHHHHHHhhccCCCChHHHHHHHhhc
Q 007482 489 NRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSK-A-----NNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIG 562 (602)
Q Consensus 489 ~~DPRa~~L~~~~~~~~~~~~~~~~a~~ie~~~~~~-~-----~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~ 562 (602)
.|||+++|+++++++.+.++++++++++|+++.+. + ++++||||||+|+++++||+|.++||+
T Consensus 257 -~DPRa~~l~~~a~~~~~~~~~~~~a~~le~~~~~~~g~yf~~k~l~pNVD~~sg~i~~~lG~p~~~~t~---------- 325 (363)
T 2c6x_A 257 -KDPRAEALRQKAEEVAGNDRDLDLALHVEAEAIRLLEIYKPGRKLYTNVEFYAAAVMRAIDFDDELFTP---------- 325 (363)
T ss_dssp -CCHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHSCSSCCCBCTHHHHHHHHHHTTCCGGGHHH----------
T ss_pred -CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccccccCCCCcChHHHHHHHHHHhCCChhhhhh----------
Confidence 59999999999999876889999999999998652 3 999999999999999999999999888
Q ss_pred chhhhHHHHhhhhhhhhHHHhhhhcCCCCCC
Q 007482 563 YLNGLFVLARSIGLIGHTFDQKRLKQPLYRH 593 (602)
Q Consensus 563 ~~~~lf~~~R~~G~iAH~~Eq~~~~~P~~r~ 593 (602)
+|+++|++||+|||+||+... ++.|+
T Consensus 326 ----lF~i~R~~Gw~AH~~Eq~~~~-~i~RP 351 (363)
T 2c6x_A 326 ----TFSASRMVGWCAHVLEQAENN-MIFRP 351 (363)
T ss_dssp ----HHHHHHHHHHHHHHHHHTTTC-CCCCC
T ss_pred ----hhHHhccccHHHHHHHHHHcC-CccCC
Confidence 999999999999999998553 45554
No 11
>2h12_A Citrate synthase; acidophIle, acetic acid resistance, allostery, transferase; HET: CMX; 1.85A {Acetobacter aceti}
Probab=100.00 E-value=2e-51 Score=442.89 Aligned_cols=226 Identities=21% Similarity=0.322 Sum_probs=204.2
Q ss_pred hHHHhhcCcccCcHHHHHHHhh-hcCCCcccCCCCCcccccCCCcHHHHHHHhhhCCC-----CchhHHHHHHHHHHHhc
Q 007482 332 LNTAIKSGKVRAPTHIISTISD-DRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRS-----LPRYCTQFIEICIMLCA 405 (602)
Q Consensus 332 ~~~a~~~~Li~~~~~i~t~I~~-~~g~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~-----~~~~~~~~l~~~Lvl~a 405 (602)
+..+. +|+++.+.++..+++ ..|.+++++..+++ +.+||++|+ ++++ +++.++++||++|||||
T Consensus 166 ~~~a~--rLiAk~ptiaa~~yr~~~g~~~~~p~~~ls-------~a~nfl~ml-~g~~~~~~~~~~~~~~~ld~~LiLhA 235 (436)
T 2h12_A 166 DLAAM--RLIAKIPTIAAWAYKYTQGEAFIYPRNDLN-------YAENFLSMM-FARMSEPYKVNPVLARAMNRILILHA 235 (436)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHHTCCCCCCCTTSC-------HHHHHHHHH-HCBTTBCCCCCHHHHHHHHHHHHHHS
T ss_pred HHHHH--HHHHHHHHHHHHHHHHhcCCCCCCCCCCCC-------HHHHHHHHh-cCCCCccCCCCHHHHHHHHhhheeec
Confidence 33444 478888888887766 56888888999999 999999998 5654 88899999999999999
Q ss_pred CCCCCCccchheeeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhccccCHHHHHHHHHHcC--CCcCCCCC
Q 007482 406 DHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKG--IRVPGIGH 482 (602)
Q Consensus 406 DHg~~~st~~a~r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~--~~ipGfGH 482 (602)
|||+|+|| |++|+++||++|+|+|++||++++ ||+||||+++|++||+++.+. ++++++|++.++++ ++||||||
T Consensus 236 DHe~NaST-ftaRvvaSt~ad~ysaiaAgi~aL~GPlHGGAne~v~~ml~ei~~~-~~v~~~i~~~l~~~~g~~imGFGH 313 (436)
T 2h12_A 236 DHEQNAST-STVRLAGSTGANPFACIAAGIAALWGPAHGGANEAVLKMLARIGKK-ENIPAFIAQVKDKNSGVKLMGFGH 313 (436)
T ss_dssp CCSSCHHH-HHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHHCSG-GGHHHHHHHHHCTTSCCCCTTBCC
T ss_pred CCCCchHH-HHHHHHHhcCccHHHHHHHHHHhcCCCccCCHHHHHHHHHHHhcCc-hHHHHHHHHHHhccCCCcccCCCc
Confidence 99999999 999999999999999999999999 999999999999999999766 68999999999955 99999999
Q ss_pred CCCCCCCCcHHHHHHHHHHHHh----CC-CChHHHHHHHHHHHHHhc----cCCCccchhHHHHHHHHHHhhccCCCChH
Q 007482 483 RIKRGDNRDKRVELLQKFARTH----FP-SVKYMEYAVQVETYTLSK----ANNLVLNVDGAIGSLFLDLLAGSGMFSKQ 553 (602)
Q Consensus 483 ~v~~~~~~DPRa~~L~~~~~~~----~~-~~~~~~~a~~ie~~~~~~----~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~ 553 (602)
|+||. .|||+++|+++++++ .. .+++++++.++|+++.+. .++++||||||+|+++++||||.+|||+
T Consensus 314 rVYk~--~DPRa~iLk~~a~~l~~~~g~~~~~~~~la~~lE~~al~~~~~~~k~l~pNVDfysg~i~~~lGiP~~~ft~- 390 (436)
T 2h12_A 314 RVYKN--FDPRAKIMQQTCHEVLTELGIKDDPLLDLAVELEKIALSDDYFVQRKLYPNVDFYSGIILKAMGIPTSMFTV- 390 (436)
T ss_dssp SSCSS--CCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHSHHHHHTTCCBCTHHHHHHHHHHTTCCGGGHHH-
T ss_pred cccCC--CCCcHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccCCCcChHHHHHHHHHHhCCChhhhhh-
Confidence 99985 599999999999987 32 689999999999997543 5899999999999999999999999999
Q ss_pred HHHHHHhhcchhhhHHHHhhhhhhhhHHHhhh
Q 007482 554 EIDEIVEIGYLNGLFVLARSIGLIGHTFDQKR 585 (602)
Q Consensus 554 e~~~~~p~~~~~~lf~~~R~~G~iAH~~Eq~~ 585 (602)
||+++|++||+|||+||+.
T Consensus 391 -------------lFaisR~~GW~AH~~Eq~~ 409 (436)
T 2h12_A 391 -------------LFAVARTTGWVSQWKEMIE 409 (436)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHH
T ss_pred -------------hhhhhccccHHHHHHHHHh
Confidence 9999999999999999983
No 12
>3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis}
Probab=100.00 E-value=5.7e-52 Score=444.66 Aligned_cols=234 Identities=19% Similarity=0.277 Sum_probs=206.2
Q ss_pred hHHHhhcCcccCcHHHHHHHhh-hcCCCcccCCCCCcccccCCCcHHHHHHHhhhCC----CCchhHHHHHHHHHHHhcC
Q 007482 332 LNTAIKSGKVRAPTHIISTISD-DRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKR----SLPRYCTQFIEICIMLCAD 406 (602)
Q Consensus 332 ~~~a~~~~Li~~~~~i~t~I~~-~~g~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~----~~~~~~~~~l~~~Lvl~aD 406 (602)
+.++.+ |+++.+.++..+++ ..|+++++++++++ +.+||++|+ ++. +|++.++++||++||||||
T Consensus 164 ~~~a~r--LiAk~pti~a~~yr~~~G~~~~~p~~~ls-------~a~NfL~ml-~~~~~~~~p~~~~~~~ld~~LiLhAD 233 (427)
T 3msu_A 164 DEVAKN--IVAKIATIAAMAYRHNHGKKFLEPKMEYG-------YAENFLYMM-FADDESYKPDELHIKAMDTIFMLHAD 233 (427)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHHHTTCCCCCCCTTSC-------HHHHHHHHH-HCSSTTCCCCHHHHHHHHHHHHHHSC
T ss_pred HHHHHH--HHHHHHHHHHHHHHHHcCCCCCCCCCccC-------HHHHHHHHH-hcccccCCCCHHHHHHHHHHHhhccC
Confidence 344554 78888988888766 57999999999999 999999998 576 7889999999999999999
Q ss_pred CCCCCccchheeeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhccccCHHHHHHHHHHcCC--CcCCCCCC
Q 007482 407 HGPCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGI--RVPGIGHR 483 (602)
Q Consensus 407 Hg~~~st~~a~r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~--~ipGfGH~ 483 (602)
||+|+|| |++|+++||++|+|+|++||++++ ||+||||+++|++||+++.+. ++++++|++.+++++ +|||||||
T Consensus 234 He~N~ST-~taRvvaSt~ad~ysavaAgi~aL~GPlHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~~~i~GFGHr 311 (427)
T 3msu_A 234 HEQNAST-STVRLSGSTGNSPYAAIIAGITALWGPAHGGANEAVLKMLSEIGST-ENIDKYIAKAKDKDDPFRLMGFGHR 311 (427)
T ss_dssp CSSCHHH-HHHHHHHTTTCCHHHHHHHHHHHHTSHHHHCHHHHHHHHHHHHCST-THHHHHHHHHHTC-----CCSBCCS
T ss_pred CCCChhH-HHHHHHHccCCCHHHHHHHHHHHccCCccCCHHHHHHHHHHHhcCc-hHHHHHHHHHHhCCCCcCcCCCCCC
Confidence 9999999 999999999999999999999998 999999999999999999876 689999999999999 99999999
Q ss_pred CCCCCCCcHHHHHHHHHHHHh-----CCCChHHHHHHHHHHHHHh----ccCCCccchhHHHHHHHHHHhhccCCCChHH
Q 007482 484 IKRGDNRDKRVELLQKFARTH-----FPSVKYMEYAVQVETYTLS----KANNLVLNVDGAIGSLFLDLLAGSGMFSKQE 554 (602)
Q Consensus 484 v~~~~~~DPRa~~L~~~~~~~-----~~~~~~~~~a~~ie~~~~~----~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e 554 (602)
+||. .|||+++|+++++++ ...++++++++++|+++.+ +.++++||||||+|+++++||+|.+|||+
T Consensus 312 VYk~--~DPRa~~Lk~~a~~l~~~~g~~~~~~~~la~~le~~a~~d~~~~~k~l~pNVDfysg~i~~~lGip~~~ft~-- 387 (427)
T 3msu_A 312 VYKN--TDPRATAMKKNCEEILAKLGHSDNPLLTVAKKLEEIALQDEFFIERKLFSNVDFYSGIILKAMGIPEDMFTA-- 387 (427)
T ss_dssp SSSS--CCHHHHHHHHHTHHHHHHGGGCSSHHHHHHHHHHHHHC------CCCCCBCHHHHHHHHHHHTTCCGGGHHH--
T ss_pred CCCC--CCccHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhhcccccccCCCCChHHHHHHHHHHcCCCccccce--
Confidence 9985 599999999998875 2368999999999999864 36899999999999999999999999988
Q ss_pred HHHHHhhcchhhhHHHHhhhhhhhhHHHhhhh-----cCCCCCC
Q 007482 555 IDEIVEIGYLNGLFVLARSIGLIGHTFDQKRL-----KQPLYRH 593 (602)
Q Consensus 555 ~~~~~p~~~~~~lf~~~R~~G~iAH~~Eq~~~-----~~P~~r~ 593 (602)
+|++||++||+|||+||+.. .||...|
T Consensus 388 ------------lFaisR~~Gw~AH~~Eq~~~p~~rI~RPr~~Y 419 (427)
T 3msu_A 388 ------------IFALARTSGWISQWIEMVNDPAQKIGRPRQLY 419 (427)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHCTTCCCCCCEEEE
T ss_pred ------------ehhHHhHHHHHHHHHHHHhCCCCceeCCCcee
Confidence 99999999999999999853 3555444
No 13
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.9e-51 Score=436.69 Aligned_cols=234 Identities=21% Similarity=0.307 Sum_probs=208.8
Q ss_pred hHHHhhcCcccCcHHHHHHHhh-hcCCCcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCC
Q 007482 332 LNTAIKSGKVRAPTHIISTISD-DRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPC 410 (602)
Q Consensus 332 ~~~a~~~~Li~~~~~i~t~I~~-~~g~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~ 410 (602)
+.++.+ |+++.+.+++.+++ ..|.+++.+..+++ ..+||++|+ ++++|++.++++||++||+|||||+|
T Consensus 114 ~~~a~~--Lia~~p~i~a~~y~~~~g~~~i~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~Lvl~ADHg~n 183 (373)
T 1vgp_A 114 DIKGIK--LISKFPTIVANYARLRKGLDIIEPDPKLS-------HSENFLYML-YGDRPNEIKSKAMDVTLILHIDHEMN 183 (373)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHHHTTCCCCCCCTTSC-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHTTSCCSCC
T ss_pred HHHHHH--HHHHHHHHHHHHHHHhcCCCCCCCCCCCC-------HHHHHHHHh-cCCCCCHHHHHHHHHHHHHhccCCCc
Confidence 444554 79999999998876 46888777888888 888888777 78889999999999999999999999
Q ss_pred CccchheeeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhccccCHHHHHHHHHHcCCCcCCCCCCCCCCCC
Q 007482 411 VSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDN 489 (602)
Q Consensus 411 ~st~~a~r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~~ipGfGH~v~~~~~ 489 (602)
+|| |++|+++||++|+|+|++||++++ ||+||||++.|++||+++.+. ++++++|++.++++++|||||||+||.
T Consensus 184 ~ST-~aaRv~aSt~ad~~savaagi~aL~GplHGGAne~v~~ml~~i~~~-~~~~~~i~~~l~~~~~i~GfGHrvyk~-- 259 (373)
T 1vgp_A 184 AST-FASLVVASTFSDLYSSIVAGISALKGPLHGGANYEALKMFKEIGSP-EKVNDYILNRLSNKQRIMGFGHRVYKT-- 259 (373)
T ss_dssp HHH-HHHHHHHTTTCCHHHHHHHHHHHHTCTTSSSCCCHHHHHHHHSCSS-SSHHHHHHHHHHTTCCCTTBCCSSCSS--
T ss_pred hHH-HHHHHHHhcCccHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhcCc-hhHHHHHHHHHHcCCcccCCCccccCC--
Confidence 999 999999999999999999999999 999999999999999999765 689999999999999999999999985
Q ss_pred CcHHHHHHHHHHHHhC---CCC--hHHHHHHHHHHHHHhc--cCCCccchhHHHHHHHHHHhhccCCCChHHHHHHHhhc
Q 007482 490 RDKRVELLQKFARTHF---PSV--KYMEYAVQVETYTLSK--ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIG 562 (602)
Q Consensus 490 ~DPRa~~L~~~~~~~~---~~~--~~~~~a~~ie~~~~~~--~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~ 562 (602)
.|||+++|+++++++. +.+ +++++++++|+++.+. .++++||||||+|+++++||+|.++||+
T Consensus 260 ~DPRa~~L~~~~~~l~~~~~~~~~~~~~~a~~le~~~~~~~~~k~l~pNVDf~sg~i~~~lGip~~~~t~---------- 329 (373)
T 1vgp_A 260 YDPRARILKQYAKLLAEKEGGEIYTLYQIAEKVEEIGIKYLGPKGIYPNVDFFSSIVFYSLGFEPDFFPA---------- 329 (373)
T ss_dssp CCHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHGGGTCCBCHHHHHHHHHHHTTCCGGGHHH----------
T ss_pred CCCchHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhcccCCCCCChHHHHHHHHHHcCCCHHhhhh----------
Confidence 5999999999999883 344 8999999999998653 4899999999999999999999998888
Q ss_pred chhhhHHHHhhhhhhhhHHHhhhh---cCCCCCC
Q 007482 563 YLNGLFVLARSIGLIGHTFDQKRL---KQPLYRH 593 (602)
Q Consensus 563 ~~~~lf~~~R~~G~iAH~~Eq~~~---~~P~~r~ 593 (602)
+|+++|++||+|||+||++. .||..+|
T Consensus 330 ----lFaisR~~Gw~AH~~Eq~~~~~i~RP~~~Y 359 (373)
T 1vgp_A 330 ----VFASARVVGWVAHIMEYIKDNKIIRPKAYY 359 (373)
T ss_dssp ----HHHHHHHHHHHHHHHHHGGGCCCCCCCCCC
T ss_pred ----hHHhhccccHHHHHHHHHhcCCCcCccccc
Confidence 99999999999999999854 3555544
No 14
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=100.00 E-value=3.6e-51 Score=434.85 Aligned_cols=222 Identities=23% Similarity=0.316 Sum_probs=203.3
Q ss_pred cCcccCcHHHHHHHhhh-cCCCcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchh
Q 007482 338 SGKVRAPTHIISTISDD-RGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHN 416 (602)
Q Consensus 338 ~~Li~~~~~i~t~I~~~-~g~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a 416 (602)
++|++..+.+...+++. .|.+++.++.+++ ..+||++|+ ++++|++.++++||++||+|||||+|+|| |+
T Consensus 122 ~~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~Lvl~ADHg~n~St-~a 192 (377)
T 1iom_A 122 LDLIAKFATIVAANKRLKEGKEPIPPREDLS-------HAANFLYMA-NGVEPSPEQARLMDAALILHAEHGFNAST-FT 192 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCCCTTSC-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHHHSCCSSCHHH-HH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCCCCC-------HHHHHHHHh-cCCCCCHHHHHHHHHHHHHhccCCCCchH-HH
Confidence 35799999998888774 5888877888888 788888777 78889999999999999999999999999 99
Q ss_pred eeeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhccccCHHHHHHHHHHcCCCcCCCCCCCCCCCCCcHHHH
Q 007482 417 TIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVE 495 (602)
Q Consensus 417 ~r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~~ipGfGH~v~~~~~~DPRa~ 495 (602)
+|+++||++|+|+|++||++++ ||+||||++.|++||+++.+. ++++++|++.++++++|||||||+||. .|||++
T Consensus 193 aRv~aSt~~d~~savaagi~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~i~GfGHrvyk~--~DPRa~ 269 (377)
T 1iom_A 193 AIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTP-ERAREWVREKLAKKERIMGMGHRVYKA--FDPRAG 269 (377)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHCSH-HHHHHHHHHHHHTTCCCTTBSCSSCSS--CCTTHH
T ss_pred HHHHhhcCCcHHHHHHHHHHHcccCccCChhHHHHHHHHHhcCc-hhHHHHHHHHHHCCCcccCCCCcccCC--CCCchH
Confidence 9999999999999999999999 999999999999999999765 589999999999999999999999985 599999
Q ss_pred HHHHHHHHhC---CCChHHHHHHHHHHHHHh-c-cCCCccchhHHHHHHHHHHhhccCCCChHHHHHHHhhcchhhhHHH
Q 007482 496 LLQKFARTHF---PSVKYMEYAVQVETYTLS-K-ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVL 570 (602)
Q Consensus 496 ~L~~~~~~~~---~~~~~~~~a~~ie~~~~~-~-~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~ 570 (602)
+|+++++++. +.++++++++++|+++.+ . +++++||||||+|+++++||+|.++||+ +|++
T Consensus 270 ~L~~~~~~l~~~~~~~~~~~~a~~le~~~~~~~~~k~l~pNVD~~sg~i~~~lG~p~~~~t~--------------lF~i 335 (377)
T 1iom_A 270 VLEKLARLVAEKHGHSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTP--------------IFAV 335 (377)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTTTTCCBCHHHHHHHHHHHTTCCGGGHHH--------------HHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHcCCCHHhhhh--------------HHHH
Confidence 9999999883 568999999999999865 3 3899999999999999999999999888 9999
Q ss_pred HhhhhhhhhHHHhhh
Q 007482 571 ARSIGLIGHTFDQKR 585 (602)
Q Consensus 571 ~R~~G~iAH~~Eq~~ 585 (602)
+|++||+|||+||+.
T Consensus 336 ~R~~Gw~AH~~Eq~~ 350 (377)
T 1iom_A 336 ARISGWVGHILEYQE 350 (377)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hccccHHHHHHHHHh
Confidence 999999999999996
No 15
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-51 Score=440.09 Aligned_cols=228 Identities=19% Similarity=0.270 Sum_probs=207.1
Q ss_pred CcccCcHHHHHHHhh-hcCCCcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchhe
Q 007482 339 GKVRAPTHIISTISD-DRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNT 417 (602)
Q Consensus 339 ~Li~~~~~i~t~I~~-~~g~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~ 417 (602)
+|+++.+.++..+++ ..|.+++.+..+++ +.+||++|+ ++++|++.++++||++||||||||+|+|| |++
T Consensus 167 rLiAk~pti~a~~yr~~~g~~~~~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~LiLhADHe~NaST-~ta 237 (414)
T 3hwk_A 167 RMMAVLPTIVAIDMRRRRGLPPIAPHSGLG-------YAQNFLHMC-FGEVPETAVVSAFEQSMILYAEHGFNAST-FAA 237 (414)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCCTTSC-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHHTSCCSSCHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCcccc-------HHHHHHHHh-cCCCCCHHHHHHHHHHHhhccCCCCChHH-HHH
Confidence 478888888888766 47888888998998 889999887 78899999999999999999999999999 999
Q ss_pred eeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhccccCHHHHHHHHHHcCCCcCCCCCCCCCCCCCcHHHHH
Q 007482 418 IVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVEL 496 (602)
Q Consensus 418 r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~~ipGfGH~v~~~~~~DPRa~~ 496 (602)
|+++||++|+|+|++||++++ ||+||||++.|++||+++.+. ++++++|++.++++++|||||||+||. .|||+++
T Consensus 238 RvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~I~GFGHrVyk~--~DPRa~~ 314 (414)
T 3hwk_A 238 RVVTSTQSDIYSAVTGAIGALKGRLHGGANEAVMHDMIEIGDP-ANAREWLRAKLARKEKIMGFGHRVYRH--GDSRVPT 314 (414)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHTSTTTTHHHHHHHHHHHHHCSG-GGHHHHHHHHHHTTCCCTTBCCSSCSS--CCTTHHH
T ss_pred HHHHhcCCCHHHHHHHHHHHhcCCccCChHHHHHHHHHHhCCc-hHHHHHHHHHHhcCCCccCCCCCCCCC--CCccHHH
Confidence 999999999999999999998 999999999999999999866 689999999999999999999999985 5999999
Q ss_pred HHHHHHHh---CCCChHHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHhhccCCCChHHHHHHHhhcchhhhHHHHhh
Q 007482 497 LQKFARTH---FPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARS 573 (602)
Q Consensus 497 L~~~~~~~---~~~~~~~~~a~~ie~~~~~~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R~ 573 (602)
|+++++++ ...++++++++++|+++.+ .++++||||||+|+++.+||+|.++||+ ||+++|+
T Consensus 315 L~~~a~~l~~~~g~~~~~~~a~~le~~~~~-~k~l~pNVDf~sg~i~~~lGip~~~~t~--------------lFaisR~ 379 (414)
T 3hwk_A 315 MKRALERVGTVRDGQRWLDIYQVLAAEMAS-ATGILPNLDFPTGPAYYLMGFDIASFTP--------------IFVMSRI 379 (414)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHCCCBCTHHHHHHHHHHHTCCGGGHHH--------------HHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-hcCCCCchHHHHHHHHHHhCCCHHHHHH--------------HHHHHhH
Confidence 99999865 4567999999999999865 4899999999999999999999999888 9999999
Q ss_pred hhhhhhHHHhhh---hcCCCCCC
Q 007482 574 IGLIGHTFDQKR---LKQPLYRH 593 (602)
Q Consensus 574 ~G~iAH~~Eq~~---~~~P~~r~ 593 (602)
+||+|||+||+. ++||..+|
T Consensus 380 ~Gw~AH~~Eq~~~~riiRPr~~Y 402 (414)
T 3hwk_A 380 TGWTAHIMEQATANALIRPLSAY 402 (414)
T ss_dssp HHHHHHHHHHHHSCCCCCCEEEE
T ss_pred HHHHHHHHHHHhcCCCcCCCcee
Confidence 999999999983 34555444
No 16
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=100.00 E-value=3.1e-51 Score=434.50 Aligned_cols=223 Identities=19% Similarity=0.293 Sum_probs=204.1
Q ss_pred cCcccCcHHHHHHHhhh-cCCCcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchh
Q 007482 338 SGKVRAPTHIISTISDD-RGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHN 416 (602)
Q Consensus 338 ~~Li~~~~~i~t~I~~~-~g~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a 416 (602)
.+|+++.+.++..+++. .|.+++.++.+++ ..+||++|+ ++++|++.++++||++||+|||||+|+|| |+
T Consensus 121 ~~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls-------~~~nfl~ml-~g~~p~~~~~~~ld~~Lvl~aDHg~n~St-~a 191 (371)
T 1aj8_A 121 ISVTAKIPTIVANWYRIKNGLEYVPPKEKLS-------HAANFLYML-HGEEPPKEWEKAMDVALILYAEHEINAST-LA 191 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCCCTTSC-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHHHSCCSSCHHH-HH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCCCCC-------HHHHHHHHh-cCCCCCHHHHHHHHHHHhHhcCCCCChhH-HH
Confidence 34799999999888774 6888777888888 788888776 78889999999999999999999999999 99
Q ss_pred eeeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhccccCHHHHHHHHHHcCCCcCCCCCCCCCCCCCcHHHH
Q 007482 417 TIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVE 495 (602)
Q Consensus 417 ~r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~~ipGfGH~v~~~~~~DPRa~ 495 (602)
+|+++||++|+|+|++||++++ ||+||||++.|++||+++.+. ++++++|++.++++++|||||||+||. .|||++
T Consensus 192 arv~aSt~~d~~savaagi~aL~GplHGGAne~v~~~l~~i~~~-~~~~~~v~~~l~~~~~i~GfGHrvyk~--~DPRa~ 268 (371)
T 1aj8_A 192 VMTVGSTLSDYYSAILAGIGALKGPIHGGAVEEAIKQFMEIGSP-EKVEEWFFKALQQKRKIMGAGHRVYKT--YDPRAR 268 (371)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHHCSG-GGHHHHHHHHHHHTCCCTTBCCSSCSS--CCHHHH
T ss_pred HHHHhhcCCcHHHHHHHHHHHcCCCccCCchHHHHHHHHHhcCc-hhHHHHHHHHHHcCCeeecCCccccCC--CCccHH
Confidence 9999999999999999999999 999999999999999999866 689999999999999999999999985 599999
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHHhc--cCCCccchhHHHHHHHHHHhhccCCCChHHHHHHHhhcchhhhHHHHhh
Q 007482 496 LLQKFARTHFPSVKYMEYAVQVETYTLSK--ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARS 573 (602)
Q Consensus 496 ~L~~~~~~~~~~~~~~~~a~~ie~~~~~~--~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~lf~~~R~ 573 (602)
+|+++++++ +.++++++++++|+++.+. .++++||||||+|+++++||+|.++||+ +|+++|+
T Consensus 269 ~l~~~~~~~-~~~~~~~~a~~le~~~~~~~~~k~l~pNVD~~sg~i~~~lGip~~~~t~--------------lF~i~R~ 333 (371)
T 1aj8_A 269 IFKKYASKL-GDKKLFEIAERLERLVEEYLSKKGISINVDYWSGLVFYGMKIPIELYTT--------------IFAMGRI 333 (371)
T ss_dssp HHHHHHHHH-SCHHHHHHHHHHHHHHHHHTTTTTCCBCTTTTHHHHHHTTTCCGGGHHH--------------HHHHHHH
T ss_pred HHHHHHHHc-CCCHHHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHHHcCCCHHhhhh--------------HHHHhcc
Confidence 999999998 5689999999999998663 3899999999999999999999998888 9999999
Q ss_pred hhhhhhHHHhhhhc
Q 007482 574 IGLIGHTFDQKRLK 587 (602)
Q Consensus 574 ~G~iAH~~Eq~~~~ 587 (602)
+||+|||+||++..
T Consensus 334 ~Gw~AH~~Eq~~~~ 347 (371)
T 1aj8_A 334 AGWTAHLAEYVSHN 347 (371)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHhcC
Confidence 99999999998543
No 17
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=100.00 E-value=6.8e-52 Score=438.85 Aligned_cols=235 Identities=19% Similarity=0.232 Sum_probs=208.9
Q ss_pred cchHHHhhcCcccCcHHHHHHHhh-hcCCCcccCCCC-CcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCC
Q 007482 330 EDLNTAIKSGKVRAPTHIISTISD-DRGEEPCYAGVP-MSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADH 407 (602)
Q Consensus 330 ~D~~~a~~~~Li~~~~~i~t~I~~-~~g~~i~~rg~d-L~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDH 407 (602)
..++++.+ |+++.+.++..+++ ..|.+++.+..+ ++ +.+||++|+ ++++|++.++++||++||+||||
T Consensus 117 ~~~~~a~~--LiAk~p~i~a~~yr~~~g~~~i~p~~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~Lil~ADH 186 (375)
T 3tqg_A 117 NEQNIADR--LVAIFPAIQCYWYHYSHHGKRIDTELDDLT-------LAGYFLHLL-LGKKAAQMAIDCMNASLILYAEH 186 (375)
T ss_dssp GHHHHHHH--HHHHHHHHHHHHHHHHHHCCCCCCCCCCSS-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHhcCCCCcCCCCcccc-------HHHHHHHHh-cCCCCCHHHHHHHHHHHHHhccC
Confidence 44555654 79989999888777 467777777776 88 888888887 78899999999999999999999
Q ss_pred CCCCccchheeeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhccccCHHHHHHHHHHcCCCcCCCCCCCCC
Q 007482 408 GPCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKR 486 (602)
Q Consensus 408 g~~~st~~a~r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~~ipGfGH~v~~ 486 (602)
|+|+|| |++|+++||++|+|+|++||++++ ||+||||++.|++||+++.+. ++++++|++.++++++|||||||+||
T Consensus 187 e~n~St-~tarvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml~~i~~~-~~~~~~v~~~~~~~~~i~GfGHrVyk 264 (375)
T 3tqg_A 187 EFNAST-FAARVCSATLSDIYSAVTAAIATLRGPLHGGANEAAMDLIMLYKTP-SEAIAGIKRKLANKELIMGFGHAVYR 264 (375)
T ss_dssp SSCHHH-HHHHHHHTTTCCHHHHHHHHHHHHTSHHHHCHHHHHHHHHTTCSSH-HHHHHHHHHHHHTCCCCTTBCCSSCS
T ss_pred CCCHHH-HHHHHHHccCCCHHHHHHHHHHhccCcccCCHHHHHHHHHHHhcCh-hHHHHHHHHHHhcCCCccCCCCCCCC
Confidence 999999 999999999999999999999998 999999999999999998765 58999999999999999999999998
Q ss_pred CCCCcHHHHHHHHHHHHhC---CCChHHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHhhccCCCChHHHHHHHhhcc
Q 007482 487 GDNRDKRVELLQKFARTHF---PSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGY 563 (602)
Q Consensus 487 ~~~~DPRa~~L~~~~~~~~---~~~~~~~~a~~ie~~~~~~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~ 563 (602)
. .|||+++|+++++++. +.++++++++++|+++.+ .++++||||||+|+++.+||+|.++||+
T Consensus 265 ~--~DPRa~~l~~~a~~l~~~~~~~~~~~~a~~le~~~~~-~k~l~pNVDf~sg~i~~~lGip~~~~t~----------- 330 (375)
T 3tqg_A 265 E--RDPRNAIIKSWAQKLAPNAADGYLFDISDAIENTMQD-EKKLFPNLDFYSATAYHFLNIPTKLFTP----------- 330 (375)
T ss_dssp S--CCHHHHHHHHHHHHHTTTSTTTHHHHHHHHHHHHHHH-HHCCCBCHHHHHHHHHHHTTCCGGGHHH-----------
T ss_pred C--CCccHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-hcCCCCChHHHHHHHHHHcCCCHHHHHH-----------
Confidence 5 5999999999999984 468999999999999865 5899999999999999999999999888
Q ss_pred hhhhHHHHhhhhhhhhHHHhhhh---cCCCCCC
Q 007482 564 LNGLFVLARSIGLIGHTFDQKRL---KQPLYRH 593 (602)
Q Consensus 564 ~~~lf~~~R~~G~iAH~~Eq~~~---~~P~~r~ 593 (602)
+|+++|++||+|||+||+.. .||..+|
T Consensus 331 ---lFa~sR~~Gw~AH~~Eq~~~~~iiRP~~~Y 360 (375)
T 3tqg_A 331 ---IFVMSRVTGWCAHIFEQRKDNRIIRPNADY 360 (375)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHSCCCCCCEEEE
T ss_pred ---HHHHHhHHHHHHHHHHHHhcCCCCCCccee
Confidence 99999999999999999844 3554444
No 18
>1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1
Probab=100.00 E-value=3.5e-51 Score=434.95 Aligned_cols=234 Identities=24% Similarity=0.342 Sum_probs=209.1
Q ss_pred hHHHhhcCcccCcHHHHHHHhhh-cCCCcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCC
Q 007482 332 LNTAIKSGKVRAPTHIISTISDD-RGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPC 410 (602)
Q Consensus 332 ~~~a~~~~Li~~~~~i~t~I~~~-~g~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~ 410 (602)
+.++. +|+++.+.+++.+++. .|.+++.+..+++ ..+||++|+ ++++|++.++++||++||+|||||+|
T Consensus 117 ~~~a~--~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~Lvl~ADHg~n 186 (377)
T 1o7x_A 117 KEKAI--SIIAKMATLVANVYRRKEGNKPRIPEPSDS-------FAKSFLLAS-FAREPTTDEINAMDKALILYTDHEVP 186 (377)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHTTCCCCCCCCCSC-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHHHSCCSCC
T ss_pred HHHHH--HHHHHHHHHHHHHHHHhcCCCCCCCCCCCC-------HHHHHHHHH-hCCCCCHHHHHHHHHHHHHhccCCCC
Confidence 44455 4799899999888774 6888887888888 888888877 78889999999999999999999999
Q ss_pred CccchheeeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhccccCHHHHHHHHH-HcCCCcCCCCCCCCCCC
Q 007482 411 VSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMK-KKGIRVPGIGHRIKRGD 488 (602)
Q Consensus 411 ~st~~a~r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~~~~~~~~~v~~~~-~~~~~ipGfGH~v~~~~ 488 (602)
+|| |++|+++||++|+|+|++||++++ ||+||||++.|++||+++.+. ++++++|++.+ +++++|||||||+||.
T Consensus 187 ~St-~aaRv~aSt~ad~~savaagi~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~~i~GfGHrvyk~- 263 (377)
T 1o7x_A 187 AST-TAALVAASTLSDMYSSLTAALAALKGPLHGGAAEEAFKQFIEIGDP-NRVQNWFNDKVVNQKNRLMGFGHRVYKT- 263 (377)
T ss_dssp HHH-HHHHHHHHTTCCHHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHCSG-GGHHHHHHHHTTTTCCCCTTBCCSSCSS-
T ss_pred hHH-HHHHHHHhcCCcHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhCCh-hHHHHHHHHHHHhcCCcccCCCccccCC-
Confidence 999 999999999999999999999999 999999999999999999765 68999999999 9999999999999985
Q ss_pred CCcHHHHHHHHHHHHhC---CC-ChHHHHHHHHHHHHHh--ccCCCccchhHHHHHHHHHHhhccCCCChHHHHHHHhhc
Q 007482 489 NRDKRVELLQKFARTHF---PS-VKYMEYAVQVETYTLS--KANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIG 562 (602)
Q Consensus 489 ~~DPRa~~L~~~~~~~~---~~-~~~~~~a~~ie~~~~~--~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~ 562 (602)
.|||+++|+++++++. +. ++++++++++|+++.+ +.++++||||||+|+++++||+|.++||+
T Consensus 264 -~DPRa~~l~~~a~~l~~~~~~~~~~~~~a~~le~~~~~~~~~k~l~pNVD~~sg~v~~~lG~p~~~~t~---------- 332 (377)
T 1o7x_A 264 -YDPRAKIFKKLALTLIERNADARRYFEIAQKLEELGIKQFSSKGIYPNTDFYSGIVFYALGFPVYMFTA---------- 332 (377)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTTTCCBCTTTTHHHHHHHHTCCGGGHHH----------
T ss_pred -CCCchHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHhCCChhhhhh----------
Confidence 5999999999999983 34 6899999999999865 36899999999999999999999999888
Q ss_pred chhhhHHHHhhhhhhhhHHHhhhhcCCCCCC
Q 007482 563 YLNGLFVLARSIGLIGHTFDQKRLKQPLYRH 593 (602)
Q Consensus 563 ~~~~lf~~~R~~G~iAH~~Eq~~~~~P~~r~ 593 (602)
+|+++|++||+|||+||+....++.|+
T Consensus 333 ----lF~i~R~~Gw~AH~~Eq~~~~~~i~RP 359 (377)
T 1o7x_A 333 ----LFALSRTLGWLAHIIEYVEEQHRLIRP 359 (377)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHSCCCCCC
T ss_pred ----HHHHhhhccHHHHHHHHHhccCCccCC
Confidence 999999999999999999662344443
No 19
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=100.00 E-value=3.2e-51 Score=436.04 Aligned_cols=224 Identities=18% Similarity=0.235 Sum_probs=203.0
Q ss_pred cCcccCcHHHHHHHhh-hcCCCcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchh
Q 007482 338 SGKVRAPTHIISTISD-DRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHN 416 (602)
Q Consensus 338 ~~Li~~~~~i~t~I~~-~~g~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a 416 (602)
++|+++.+.+...+++ ..|++++.+..+++ ..+||++|+ ++++|++.++++||++||+|||||+|+|| |+
T Consensus 124 ~~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~Lvl~ADHg~n~St-~a 194 (378)
T 1a59_A 124 MSLLATFPSVVAYDQRRRRGEELIEPREDLD-------YSANFLWMT-FGEEAAPEVVEAFNVSMILYAEHSFNAST-FT 194 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCCCTTSC-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHHHSCCSSCHHH-HH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCCCCC-------HHHHHHHHh-cCCCCCHHHHHHHHHHHHHhcCCCCCchH-HH
Confidence 4589999999988876 46888777777888 788888777 78889999999999999999999999999 99
Q ss_pred eeeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhccc--------cCHHHHHHHHHHcCCCcCCCCCCCCCC
Q 007482 417 TIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRG--------LSAYEFVESMKKKGIRVPGIGHRIKRG 487 (602)
Q Consensus 417 ~r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~~~--------~~~~~~v~~~~~~~~~ipGfGH~v~~~ 487 (602)
+|+++||++|+|+|++||++++ ||+||||++.|++||+++.+.+ ++++++|++.++++++|||||||+||.
T Consensus 195 arv~aSt~~d~~savaagi~aL~GplHGGAne~v~~~l~~i~~~~~~~~~~~~~~~~~~v~~~l~~~~~i~GfGHrvyk~ 274 (378)
T 1a59_A 195 ARVITSTLADLHSAVTGAIGALKGPLHGGANEAVMHTFEEIGIRKDESLDEAATRSKAWMVDALAQKKKVMGFGHRVYKN 274 (378)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHTTCCCTTBCCSSCSS
T ss_pred HHHHhhcCCcHHHHHHHHHHHccCCccCCchHHHHHHHHHHhhcCCccccchHHHHHHHHHHHHhCCCeeeCCCCcccCC
Confidence 9999999999999999999999 9999999999999999997651 468899999999999999999999985
Q ss_pred CCCcHHHHHHHHHHHHhC---CCChHHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHhhccCCCChHHHHHHHhhcch
Q 007482 488 DNRDKRVELLQKFARTHF---PSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYL 564 (602)
Q Consensus 488 ~~~DPRa~~L~~~~~~~~---~~~~~~~~a~~ie~~~~~~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~ 564 (602)
.|||+++|+++++++. +.++++++++++|+++.+. ++++||||||+|+++++||||.++||+
T Consensus 275 --~DPRa~~l~~~a~~~~~~~~~~~~~~~a~~le~~~~~~-k~l~pNVD~~sg~i~~~lGip~~~~t~------------ 339 (378)
T 1a59_A 275 --GDSRVPTMKSALDAMIKHYDRPEMLGLYNGLEAAMEEA-KQIKPNLDYPAGPTYNLMGFDTEMFTP------------ 339 (378)
T ss_dssp --CCTTHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHH-HCCCBCTHHHHHHHHHHTTCCGGGHHH------------
T ss_pred --CCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-hCCCCChHHHHHHHHHHhCCChhhcch------------
Confidence 5899999999999883 5689999999999998653 899999999999999999999999888
Q ss_pred hhhHHHHhhhhhhhhHHHhhhhc
Q 007482 565 NGLFVLARSIGLIGHTFDQKRLK 587 (602)
Q Consensus 565 ~~lf~~~R~~G~iAH~~Eq~~~~ 587 (602)
||+++|++||+||++||++..
T Consensus 340 --lF~isR~~Gw~AH~~Eq~~~~ 360 (378)
T 1a59_A 340 --LFIAARITGWTAHIMEQVADN 360 (378)
T ss_dssp --HHHHHHHHHHHHHHHHHHHTC
T ss_pred --hhhhhcchhHHHHHHHHHhcC
Confidence 999999999999999998543
No 20
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=100.00 E-value=5.6e-51 Score=433.48 Aligned_cols=234 Identities=23% Similarity=0.332 Sum_probs=208.4
Q ss_pred hHHHhhcCcccCcHHHHHHHhhh-cCCCcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCC
Q 007482 332 LNTAIKSGKVRAPTHIISTISDD-RGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPC 410 (602)
Q Consensus 332 ~~~a~~~~Li~~~~~i~t~I~~~-~g~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~ 410 (602)
+.++. +|+++.+.++..+++. .|.+++.+..+++ ..+||++|+ ++++|++.++++||++||+|||||+|
T Consensus 118 ~~~a~--~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~Lvl~ADHg~n 187 (378)
T 1vgm_A 118 KELAV--QIIAKTATITANIYRAKEGLKPKIPEPSES-------YAESFLAAT-FGKKPTQEEIKAMDASLILYTDHEVP 187 (378)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHTTCCCCCCCCCSC-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHHTSCCSCC
T ss_pred HHHHH--HHHHHHHHHHHHHHHHhCCCCCCCCCCCCC-------HHHHHHHHH-hCCCCCHHHHHHHHHHHHHhccCCCc
Confidence 34455 4788889998888774 6888877888888 888888776 78889999999999999999999999
Q ss_pred CccchheeeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhccccCHHHHHHHHH-HcCCCcCCCCCCCCCCC
Q 007482 411 VSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMK-KKGIRVPGIGHRIKRGD 488 (602)
Q Consensus 411 ~st~~a~r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~~~~~~~~~v~~~~-~~~~~ipGfGH~v~~~~ 488 (602)
+|| |++|+++||++|+|+|++||++++ ||+||||+++|++||+++.+. ++++++|++.+ +++++|||||||+||.
T Consensus 188 ~St-~aaRv~aSt~~d~~savaagi~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~~i~GfGHrvyk~- 264 (378)
T 1vgm_A 188 AST-TAALVASSTLSDMYSCIVAALAALKGPLHGGAAEEAFKQFVEIGSV-ENADKWFEEKIIKGKSRLMGFGHRVYKT- 264 (378)
T ss_dssp HHH-HHHHHHHTTTCCHHHHHHHHHHHHTSTTTSCHHHHHHHHHHHHCSG-GGHHHHHHHHTTTSCCCCTTBCCSSCSS-
T ss_pred hHH-HHHHHHHhcCCcHHHHHHHHHHhccCCCCCChHHHHHHHHHHhCCH-hHHHHHHHHHHHhcCCcccCCCCcccCC-
Confidence 999 999999999999999999999998 999999999999999999765 68999999999 9999999999999985
Q ss_pred CCcHHHHHHHHHHHHhC---C-CChHHHHHHHHHHHHHh--ccCCCccchhHHHHHHHHHHhhccCCCChHHHHHHHhhc
Q 007482 489 NRDKRVELLQKFARTHF---P-SVKYMEYAVQVETYTLS--KANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIG 562 (602)
Q Consensus 489 ~~DPRa~~L~~~~~~~~---~-~~~~~~~a~~ie~~~~~--~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~ 562 (602)
.|||+++|+++++++. + .++++++++++|+++.+ +.++++||||||+|+++++||+|.++||+
T Consensus 265 -~DPRa~~L~~~a~~l~~~~~~~~~~~~~a~~le~~~~~~~~~k~l~pNVDf~sg~i~~~lGip~~~~t~---------- 333 (378)
T 1vgm_A 265 -YDPRAKIFKTLAKSFAEKNENVKKYYEIAERIEKLGVDTFGSKHIYPNTDFYSGIVFYALGFPIYMFTS---------- 333 (378)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCBCTTTTHHHHHHHTTCCGGGHHH----------
T ss_pred -CCCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHhCCCHHhhhH----------
Confidence 5999999999999883 3 56899999999999865 36899999999999999999999999888
Q ss_pred chhhhHHHHhhhhhhhhHHHhhhhcCCCCCC
Q 007482 563 YLNGLFVLARSIGLIGHTFDQKRLKQPLYRH 593 (602)
Q Consensus 563 ~~~~lf~~~R~~G~iAH~~Eq~~~~~P~~r~ 593 (602)
+|+++|++||+|||+||+....++.|+
T Consensus 334 ----lFaisR~~Gw~AH~~Eq~~~~~~i~RP 360 (378)
T 1vgm_A 334 ----LFALSRVLGWLAHIIEYVEEQHRLIRP 360 (378)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHSCCCCCC
T ss_pred ----HHHHHhhccHHHHHHHHHhccCCccCc
Confidence 999999999999999999662344443
No 21
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=100.00 E-value=4.4e-51 Score=435.21 Aligned_cols=234 Identities=19% Similarity=0.263 Sum_probs=209.1
Q ss_pred hHHHhhcCcccCcHHHHHHHhhh-cCCCcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCC
Q 007482 332 LNTAIKSGKVRAPTHIISTISDD-RGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPC 410 (602)
Q Consensus 332 ~~~a~~~~Li~~~~~i~t~I~~~-~g~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~ 410 (602)
+.++. +|+++.+.+++.+++. .|.+++++..+++ ..+||++|+ ++++|++.++++||++||+|||||+|
T Consensus 122 ~~~a~--~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~Lvl~ADHg~n 191 (385)
T 2ifc_A 122 RDVAA--EMIGRMSAITVNVYRHIMNMPAELPKPSDS-------YAESFLNAA-FGRKATKEEIDAMNTALILYTDHEVP 191 (385)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHTTCCCCCCCCCSC-------HHHHHHHHH-HTSCCCHHHHHHHHHHHHHTSCCSSC
T ss_pred HHHHH--HHHHHHHHHHHHHHHHhcCCCCCCCCCCCC-------HHHHHHHHH-hCCCCCHHHHHHHHHHHhHhcCCCcc
Confidence 34444 4799999999988774 6888887888888 788888776 78889999999999999999999999
Q ss_pred CccchheeeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhccccCHHHHHHHHH-HcCCCcCCCCCCCCCCC
Q 007482 411 VSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMK-KKGIRVPGIGHRIKRGD 488 (602)
Q Consensus 411 ~st~~a~r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~~~~~~~~~v~~~~-~~~~~ipGfGH~v~~~~ 488 (602)
+|| |++|+++||++|+|+|++||++++ ||+||||++.|++||+++.+. ++++++|++.+ +++++|||||||+||.
T Consensus 192 ~St-~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~i~~~l~~~~~~i~GfGHrvyk~- 268 (385)
T 2ifc_A 192 AST-TAGLVAVSTLSDMYSGITAALAALKGPLHGGAAEAAIAQFDEIKDP-AMVEKWFNDNIINGKKRLMGFGHRVYKT- 268 (385)
T ss_dssp HHH-HHHHHHHTTTCCHHHHHHHHHHHHTSTTTSSHHHHHHHHHHHHCSG-GGHHHHHHHHTTTSSSCCTTBCCSSCSS-
T ss_pred HHH-HHHHHHHhcCCcHHHHHHHHHHHccCCccCChHHHHHHHHHHhCCH-HHHHHHHHHHHHhcCCcccCCCCcccCC-
Confidence 999 999999999999999999999999 999999999999999999866 68999999999 9999999999999985
Q ss_pred CCcHHHHHHHHHHHHhC----CCChHHHHHHHHHHHHHh--ccCCCccchhHHHHHHHHHHhhcc--CCCChHHHHHHHh
Q 007482 489 NRDKRVELLQKFARTHF----PSVKYMEYAVQVETYTLS--KANNLVLNVDGAIGSLFLDLLAGS--GMFSKQEIDEIVE 560 (602)
Q Consensus 489 ~~DPRa~~L~~~~~~~~----~~~~~~~~a~~ie~~~~~--~~~~l~~Nvd~~~a~l~~~lG~~~--~~ft~~e~~~~~p 560 (602)
.|||+++|+++++++. +.++++++++++|+++.+ +.++++||||||+|+++++||+|. ++||+
T Consensus 269 -~DPRa~~L~~~a~~l~~~~~~~~~~~~~a~~le~~~~~~~~~k~l~pNVD~~sg~v~~~lGip~~~~~~t~-------- 339 (385)
T 2ifc_A 269 -YDPRAKIFKGIAEKLSSKKPEVHKVYEIATKLEDFGIKAFGSKGIYPNTDYFSGIVYMSIGFPLRNNIYTA-------- 339 (385)
T ss_dssp -CCHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHGGGTCCBCTTTTHHHHHHHHTCCSGGGHHHH--------
T ss_pred -CCCchHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHcCCCcchhhhhh--------
Confidence 5999999999999883 457899999999999865 368999999999999999999999 88888
Q ss_pred hcchhhhHHHHhhhhhhhhHHHhhhhcCCCCCC
Q 007482 561 IGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRH 593 (602)
Q Consensus 561 ~~~~~~lf~~~R~~G~iAH~~Eq~~~~~P~~r~ 593 (602)
||++||++||+|||+||+....++.|.
T Consensus 340 ------lF~isR~~Gw~AH~~Eq~~~~~~i~RP 366 (385)
T 2ifc_A 340 ------LFALSRVTGWQAHFIEYVEEQQRLIRP 366 (385)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred ------HHHHhhcccHHHHHHHHHhccCCccCc
Confidence 999999999999999999662345553
No 22
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=100.00 E-value=7.2e-51 Score=435.87 Aligned_cols=224 Identities=24% Similarity=0.327 Sum_probs=203.3
Q ss_pred cCcccCcHHHHHHHhh-hcCCCcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchh
Q 007482 338 SGKVRAPTHIISTISD-DRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHN 416 (602)
Q Consensus 338 ~~Li~~~~~i~t~I~~-~~g~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a 416 (602)
++|+++.+.++..+++ ..|.+++.++.+++ ..+||++|+ ++++|++.++++||++||+|||||+|+|| |+
T Consensus 152 ~~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~LvL~ADHg~naST-~a 222 (409)
T 2ibp_A 152 EKLVAKMPTIVAYHYRFSRGLEVVRPRDDLG-------HAANFLYMM-FGREPDPLASRGIDLYLILHADHEVPAST-FA 222 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCCCTTSC-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHHTSCCSCCHHH-HH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccCCCCCC-------HHHHHHHHH-hCCCCCHHHHHHHHHHHHHhcCCCCChhH-HH
Confidence 4589999999988877 46888877888888 788888776 78889999999999999999999999999 99
Q ss_pred eeeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhccccCHHHHHHHHHHc-CCCcCCCCCCCCCCCCCcHHH
Q 007482 417 TIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKK-GIRVPGIGHRIKRGDNRDKRV 494 (602)
Q Consensus 417 ~r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~-~~~ipGfGH~v~~~~~~DPRa 494 (602)
+|+++||++|+|+|++||++++ ||+||||++.|++||+++.+. ++++++|++.+++ +++|||||||+||. .|||+
T Consensus 223 aRv~aSt~ad~~savaagi~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~~i~GfGHrvyk~--~DPRa 299 (409)
T 2ibp_A 223 AHVVASTLSDLYSSVAAAIAALKGPLHGGANEMAVRNYLEIGTP-AKAKEIVEAATKPGGPKLMGVGHRVYKA--YDPRA 299 (409)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHTSTTTSCHHHHHHHHHHHHCCG-GGHHHHHHHHTSTTCCCCTTBCCSSCSS--CCHHH
T ss_pred HHHHhhcCCcHHHHHHHHHHHccCCccCCchHHHHHHHHHhCCH-HHHHHHHHHHHHhcCCcCcCCCccccCC--CCCch
Confidence 9999999999999999999999 999999999999999999866 6899999999999 99999999999985 59999
Q ss_pred HHHHHHHHHh----CCCChHHHHHHHHHHHH--Hh--ccCCCccchhHHHHHHHHHHhhccCCCChHHHHHHHhhcchhh
Q 007482 495 ELLQKFARTH----FPSVKYMEYAVQVETYT--LS--KANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNG 566 (602)
Q Consensus 495 ~~L~~~~~~~----~~~~~~~~~a~~ie~~~--~~--~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~~~~ 566 (602)
++|+++++++ ...++++++++++|+++ .+ +.++++||||||+|+++++||||.++||+
T Consensus 300 ~~L~~~a~~l~~~~~~~g~~~~~a~~le~~~l~~~~~~~k~l~pNVDf~sg~i~~~lGip~~~~t~-------------- 365 (409)
T 2ibp_A 300 KIFKEFSRDYVAKFGDPQNLFAIASAIEQEVLSHPYFQQRKLYPNVDFWSGIAFYYMGIPYEYFTP-------------- 365 (409)
T ss_dssp HHHHHHHHHHHHHHCCTTCHHHHHHHHHHHHHHCHHHHHTTCCBCGGGTHHHHHHHHTCCGGGHHH--------------
T ss_pred HHHHHHHHHHHHHhCCChHHHHHHHHHHHHHccchhhhhcCCCCChHHHHHHHHHHhCCCHHhhhh--------------
Confidence 9999999988 33449999999999998 33 25899999999999999999999999888
Q ss_pred hHHHHhhhhhhhhHHHhhhhc
Q 007482 567 LFVLARSIGLIGHTFDQKRLK 587 (602)
Q Consensus 567 lf~~~R~~G~iAH~~Eq~~~~ 587 (602)
||+++|++||+|||+||+...
T Consensus 366 lFaisR~~Gw~AH~~Eq~~~~ 386 (409)
T 2ibp_A 366 IFAMSRVVGWVAHVLEYWENN 386 (409)
T ss_dssp HHHHHHHHHHHHHHHHHGGGC
T ss_pred HHHHhccccHHHHHHHHHhcC
Confidence 999999999999999998543
No 23
>3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica}
Probab=100.00 E-value=4.3e-51 Score=435.57 Aligned_cols=235 Identities=20% Similarity=0.205 Sum_probs=207.0
Q ss_pred cchHHHhhcCcccCcHHHHHHHhhh-cCCC-cccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCC
Q 007482 330 EDLNTAIKSGKVRAPTHIISTISDD-RGEE-PCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADH 407 (602)
Q Consensus 330 ~D~~~a~~~~Li~~~~~i~t~I~~~-~g~~-i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDH 407 (602)
..++++. +|+++.+.++..+++. .+.+ +..+..+++ +.+||++|+ ++++|++.++++||++||++|||
T Consensus 146 ~~~~~a~--rLiAk~pti~a~~yr~~~g~~~i~~~~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~LiLhADH 215 (404)
T 3o8j_A 146 GARDIAD--KLLASLSSILLYWYHYSHNGERIQPETDDDS-------IGGHFLHLL-HGEKPTQSWEKAMHISLVLYAEH 215 (404)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHHHHHHHCCCCCCCCCCSS-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHcCCCCCCCCCCCCC-------HHHHHHHHh-cCCCCCHHHHHHHHHHHhhccCC
Confidence 3445554 4788889998888774 4444 444557888 889999888 68889999999999999999999
Q ss_pred CCCCccchheeeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhccccCHHHHHHHHHHcCCCcCCCCCCCCC
Q 007482 408 GPCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKR 486 (602)
Q Consensus 408 g~~~st~~a~r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~~ipGfGH~v~~ 486 (602)
|+|+|| |++|+++||++|+|+|++||++++ ||+||||+++|++||+++.+. ++++++|++.++++++|||||||+||
T Consensus 216 e~N~St-~taRvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml~~i~~~-~~~~~~v~~~l~~~~~I~GFGHrVyk 293 (404)
T 3o8j_A 216 EFNAST-FTSRVIAGTGSDVYSAIIGAIGALRGPKHGGANEVSLEIQQRYETP-DEAEADIRKRVENKEVVIGFGHPVYT 293 (404)
T ss_dssp SSSHHH-HHHHHHHTTTCCHHHHHHHHHHHHTSTTTTCHHHHHHHHHTTCSSH-HHHHHHHHHHHHTTCCCTTBCCSSCS
T ss_pred CCChHH-HHHHHHHhcCCCHHHHHHHHHHHccCCCcCCHHHHHHHHHHHhcCc-hhHHHHHHHHHhcCCcccCCCCCCCC
Confidence 999999 999999999999999999999998 999999999999999998765 68999999999999999999999998
Q ss_pred CCCCcHHHHHHHHHHHHhC---CCChHHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHhhccCCCChHHHHHHHhhcc
Q 007482 487 GDNRDKRVELLQKFARTHF---PSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGY 563 (602)
Q Consensus 487 ~~~~DPRa~~L~~~~~~~~---~~~~~~~~a~~ie~~~~~~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p~~~ 563 (602)
. .|||+++|+++++++. ..+++++++.++|+++.+ .++++||||||+|+++.+||+|.++||+
T Consensus 294 ~--~DPRa~~l~~~a~~l~~~~g~~~~~~~a~~le~~~~~-~k~l~pNVDf~sg~i~~~lGip~~~~t~----------- 359 (404)
T 3o8j_A 294 I--ADPRHQVIKRVAKQLSEEGGSLKMYHIADRLETVMWE-TKKMFPNLDWFSAVSYNMMGVPTEMFTP----------- 359 (404)
T ss_dssp S--CCHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH-HHCCCBCTTTHHHHHHHHTTCCGGGHHH-----------
T ss_pred C--CCcHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH-hcCCCcChHHHHHHHHHHcCCChHhHHH-----------
Confidence 5 5999999999999884 358999999999999854 6899999999999999999999999888
Q ss_pred hhhhHHHHhhhhhhhhHHHhhhh---cCCCCCC
Q 007482 564 LNGLFVLARSIGLIGHTFDQKRL---KQPLYRH 593 (602)
Q Consensus 564 ~~~lf~~~R~~G~iAH~~Eq~~~---~~P~~r~ 593 (602)
+|+++|++||+|||+||+.. .||..+|
T Consensus 360 ---lFaisR~~Gw~AH~~Eq~~~~riiRPr~~Y 389 (404)
T 3o8j_A 360 ---LFVIARVTGWAAHIIEQRQDNKIIRPSANY 389 (404)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHSCCCCCCCEEE
T ss_pred ---HHHHHHHHHHHHHHHHHHhcCCCCCCccee
Confidence 99999999999999999843 4665555
No 24
>3l96_A Citrate synthase; quaternary, hexamer, GRAM-negative bacteri allostery, oxaloacetate, acetylcoa, NADH, allosteric enzyme transferase; 1.90A {Escherichia coli} SCOP: a.103.1.1 PDB: 3l97_A* 3l98_A* 3l99_A 1k3p_A 1nxe_A 1nxg_A* 1owb_A* 1owc_A 4e6y_A
Probab=100.00 E-value=1.9e-51 Score=441.03 Aligned_cols=230 Identities=21% Similarity=0.331 Sum_probs=206.5
Q ss_pred cCcccCcHHHHHHHhh-hcCCCcccCCCCCcccccCCCcHHHHHHHhhhCC-----CCchhHHHHHHHHHHHhcCCCCCC
Q 007482 338 SGKVRAPTHIISTISD-DRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKR-----SLPRYCTQFIEICIMLCADHGPCV 411 (602)
Q Consensus 338 ~~Li~~~~~i~t~I~~-~~g~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~-----~~~~~~~~~l~~~Lvl~aDHg~~~ 411 (602)
++|+++.+.++..+++ ..|+++++++.+++ +.+||++|+ ++. +|++.++++||++||||||||+|+
T Consensus 162 ~rLiAk~pti~a~~yr~~~G~~~~~p~~~ls-------~a~nfl~ml-~g~~~~~~~p~~~~~~~ld~~LiLhADHe~N~ 233 (426)
T 3l96_A 162 FRLLSKMPTMAAMCYKYSIGQPFVYPRNDLS-------YAGNFLNMM-FSTPCEPYEVNPILERAMDRILILHADHEQNA 233 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCCCCCTTSC-------HHHHHHHHH-HCBTTBCCCCCHHHHHHHHHHHHTTSCCSSCH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-------HHHHHHHHh-cCCCcccCCCCHHHHHHHHHHHhhcccCCCCc
Confidence 3478888888888776 57999999999999 999999998 676 788899999999999999999999
Q ss_pred ccchheeeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhccccCHHHHHHHHHHcCC--CcCCCCCCCCCCC
Q 007482 412 SGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGI--RVPGIGHRIKRGD 488 (602)
Q Consensus 412 st~~a~r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~~~~~~~~~v~~~~~~~~--~ipGfGH~v~~~~ 488 (602)
|| |++|+++||++|+|+|++||++++ ||+||||+++|++||+++.+. ++++++|++.+++++ +|||||||+||.
T Consensus 234 ST-~taRvvaSt~ad~ysaiaAgi~aL~GplHGGAne~v~~ml~~i~~~-~~~~~~v~~~l~~~~~~~I~GfGHrVyk~- 310 (426)
T 3l96_A 234 ST-STVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEIGKK-ENIPEFVRRAKDKNDSFRLMGFGHRVYKN- 310 (426)
T ss_dssp HH-HHHHHHHHTTCCHHHHHHHHHHHHHTTTTSSHHHHHHHHHHHCCSS-SSTTTTSGGGCCSSCCTGGGTBCCSSCSS-
T ss_pred hH-HHHHHHhccCCcHHHHHHHHHHhccCCccCCHHHHHHHHHHHhcCc-hhHHHHHHHHHhCCCCcCcCCCCCCCCCC-
Confidence 99 999999999999999999999999 999999999999999999766 689999999999999 999999999985
Q ss_pred CCcHHHHHHHHHHHHh----CCCChHHHHHHHHHHHHHh----ccCCCccchhHHHHHHHHHHhhccCCCChHHHHHHHh
Q 007482 489 NRDKRVELLQKFARTH----FPSVKYMEYAVQVETYTLS----KANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVE 560 (602)
Q Consensus 489 ~~DPRa~~L~~~~~~~----~~~~~~~~~a~~ie~~~~~----~~~~l~~Nvd~~~a~l~~~lG~~~~~ft~~e~~~~~p 560 (602)
.|||+++|+++++++ ...+++++++.++|+++.+ +.++++||||||+|+++++||+|.+|||+
T Consensus 311 -~DPRa~~l~~~a~~l~~~~g~~~~~~~~a~~le~~~~~~~~~~~k~l~pNVDfysg~i~~~lGip~~~ft~-------- 381 (426)
T 3l96_A 311 -YDPRATVMRETCHEVLKELGTKDDLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTV-------- 381 (426)
T ss_dssp -CCTTHHHHHHHHHHHHHHTCSCCSSTTHHHHHHHHHHHCHHHHHHTCCBCHHHHHHHHHHHTTCCTHHHHH--------
T ss_pred -CCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcccccccCCCCchHHHHHHHHHHcCCCcccchh--------
Confidence 599999999998865 3378999999999999864 36899999999999999999999999888
Q ss_pred hcchhhhHHHHhhhhhhhhHHHhhhhcCCCCCC
Q 007482 561 IGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRH 593 (602)
Q Consensus 561 ~~~~~~lf~~~R~~G~iAH~~Eq~~~~~P~~r~ 593 (602)
+|++||++||+|||+||+....++.|.
T Consensus 382 ------lFaisR~~Gw~AH~~Eq~~~~~~I~RP 408 (426)
T 3l96_A 382 ------IFAMARTVGWIAHWSEMHSDGMKIARP 408 (426)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred ------hhHHHHHHHHHHHHHHHHhcCCCccCC
Confidence 999999999999999998543334333
No 25
>1csh_A Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A {Gallus gallus} SCOP: a.103.1.1 PDB: 1amz_A* 1csi_A* 1csr_A* 1css_A* 1al6_A* 6csc_A* 2cts_A* 3enj_A 1cts_A 4cts_A 1csc_A* 2csc_A* 3csc_A* 4csc_A* 5csc_A 5cts_A* 6cts_A* 5csc_B
Probab=100.00 E-value=2.7e-49 Score=426.70 Aligned_cols=230 Identities=20% Similarity=0.259 Sum_probs=203.2
Q ss_pred cCcccCcHHHHHHHhhh-cCC--CcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCC-CCCCcc
Q 007482 338 SGKVRAPTHIISTISDD-RGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADH-GPCVSG 413 (602)
Q Consensus 338 ~~Li~~~~~i~t~I~~~-~g~--~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDH-g~~~st 413 (602)
++|++..+.++..+++. .+. ++++++.+++ +.+||++|+ ++ |++...++||++||+|||| |+|+||
T Consensus 174 ~~LiAk~p~iaa~~yr~~~~~~~~~i~p~~~ls-------~a~nfl~ml-~~--p~~~~~~~ld~~LiLhADHeg~N~ST 243 (435)
T 1csh_A 174 MDLIAKLPCVAAKIYRNLYRAGSSIGAIDSKLD-------WSHNFTNML-GY--TDPQFTELMRLYLTIHSDHEGGNVSA 243 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCCCCCCCTTSC-------HHHHHHHHH-TC--CCHHHHHHHHHHHHHTSCCCSCSHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCccCCCCCCC-------HHHHHHHHh-cC--CChHHHHHHHHHHHHccCCCCCchHH
Confidence 34788899998887774 333 5667889999 999999987 44 7888999999999999999 699999
Q ss_pred chheeeeecCCCChHHHHHHhhccC-CCCCcChHHHHHHHHHHHhc------cccCHHHHHHHHHHcCCCcCCCCCCCCC
Q 007482 414 AHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYD------RGLSAYEFVESMKKKGIRVPGIGHRIKR 486 (602)
Q Consensus 414 ~~a~r~~ast~~~~~~av~agl~a~-Gp~hgGa~~~a~~~l~~~~~------~~~~~~~~v~~~~~~~~~ipGfGH~v~~ 486 (602)
|++|+++||++|+|+|++||++++ ||+||||++.|++||+++.+ +.++++++|++.+++|++|||||||+|+
T Consensus 244 -ftaRvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml~~i~~~ig~~~~~~~~~~~v~~~l~~g~~i~GfGHrVyk 322 (435)
T 1csh_A 244 -HTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLLWLSQLQKDLGADASDEKLRDYIWNTLNSGRVVPGYGHAVLR 322 (435)
T ss_dssp -HHHHHHHTTTCCHHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHHTTCCCTTBCCSSCC
T ss_pred -HHHHHHHhcCCCHHHHHHHHHHhccCCcccChHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCceecCCccccC
Confidence 999999999999999999999999 99999999999999987631 2357899999999999999999999998
Q ss_pred CCCCcHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHh------ccCCCccchhHHHHHHHHHHhh-ccCCCChHHHHHHH
Q 007482 487 GDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLS------KANNLVLNVDGAIGSLFLDLLA-GSGMFSKQEIDEIV 559 (602)
Q Consensus 487 ~~~~DPRa~~L~~~~~~~~~~~~~~~~a~~ie~~~~~------~~~~l~~Nvd~~~a~l~~~lG~-~~~~ft~~e~~~~~ 559 (602)
. .|||+++|+++++++.+.+++++++.++|+++.+ +.++++||||||+|+++++||+ |.++||+
T Consensus 323 ~--~DPRa~~L~~~a~~l~~~~~~~~~a~~le~~a~~~l~~~~~~k~l~pNVDf~sg~i~~~lGipp~~~ft~------- 393 (435)
T 1csh_A 323 K--TDPRYTCQREFALKHLPSDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMNYYTV------- 393 (435)
T ss_dssp S--CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHTCCSCCSBCTHHHHHHHHHHTTCCCGGGHHH-------
T ss_pred C--CCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHcCCChhhcccc-------
Confidence 5 5999999999999997789999999999988632 4589999999999999999999 6888888
Q ss_pred hhcchhhhHHHHhhhhhhhhHHHhhhhcCCCCCCC
Q 007482 560 EIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP 594 (602)
Q Consensus 560 p~~~~~~lf~~~R~~G~iAH~~Eq~~~~~P~~r~~ 594 (602)
+|+++|++||+||++||+...+|+.|..
T Consensus 394 -------lFaisR~~Gw~AH~~Eq~~~~~~I~RP~ 421 (435)
T 1csh_A 394 -------LFGVSRALGVLAQLIWSRALGFPLERPK 421 (435)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred -------hhhhhhhHHHHHHHHHHHhcCCCCcCcH
Confidence 9999999999999999996665666654
No 26
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=100.00 E-value=7.3e-47 Score=412.69 Aligned_cols=240 Identities=20% Similarity=0.208 Sum_probs=204.2
Q ss_pred cccccCCHHHHhhcCCCccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCcccc
Q 007482 56 AIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGG 135 (602)
Q Consensus 56 G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~ 135 (602)
|+|+|+++.++.+..+++|++||+||++. +++++++|.++|+| +||||+||++.+|++|+++||++|+||+|||| |+
T Consensus 20 ~~Pv~~~~~~~~~~p~~~DlavI~vPa~~-v~~~v~e~~~~Gv~-~viis~Gf~~~~~~~l~~~A~~~g~rliGPNc-G~ 96 (480)
T 3dmy_A 20 ALTQVRRWDSACQKLPDANLALISVAGEY-AAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDC-GT 96 (480)
T ss_dssp CCEEESSHHHHHHHSTTCCEEEECSCHHH-HHHHHHHHHHTTCE-EEECCCCCCHHHHHHHHHHHHHTTCCEECSSC-CE
T ss_pred CCcccchHHHHHhcCCCCCEEEEecCHHH-HHHHHHHHHhcCCC-EEEECCCCCHHHHHHHHHHHHHcCCEEEecCc-cc
Confidence 56666555554333225899999999986 77888889899999 99999999999999999999999999999999 99
Q ss_pred cccCcccccccCCcccccccccCCCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCC------CCCCCCHHHHHH
Q 007482 136 IQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGD------VFPGSTLSDHIL 209 (602)
Q Consensus 136 ~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~------~~~dv~~~d~l~ 209 (602)
+|+ . ++ +++|.+. ++||+||+|||||++++++++|+.++|+|||++||+||+ . |+++.|+|+
T Consensus 97 ~~~-~-~~---~~~f~~~-----~~~G~vaivSqSGal~~~i~~~~~~~g~G~S~~Vs~Gn~~l~~~i~--dv~~~D~l~ 164 (480)
T 3dmy_A 97 SMI-A-GT---PLAFANV-----MPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVG--GISALTALE 164 (480)
T ss_dssp EEE-T-TE---EEESCCC-----CCEEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCTTTTSTTTT--THHHHHHHH
T ss_pred ccc-C-Cc---cccccCC-----CCCCCEEEEeccHHHHHHHHHHHHHcCCCceEEEEcCCCccccccC--CCCHHHHHH
Confidence 888 4 45 5677643 369999999999999999999999999999999999999 6 999999999
Q ss_pred HhhcCCCccEEEEEEecCCCcH--HHHHHHHHhcCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHH
Q 007482 210 RFNNIPQVKMMVVLGELGGRDE--YSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALR 287 (602)
Q Consensus 210 ~l~~Dp~t~~I~ly~E~g~~~~--~~f~~~~r~~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~ 287 (602)
||.+||+||+|++|+| ++.++ ++|++++|+ ++||||++|+||++.| ||
T Consensus 165 ~l~~Dp~T~~I~ly~E-~~~e~~~~~f~~~ar~--~~KPVV~~k~Grs~~g---------------------------~r 214 (480)
T 3dmy_A 165 MLSADEKSEVLAFVSK-PPAEAVRLKIVNAMKA--TGKPTVALFLGYTPAV---------------------------AR 214 (480)
T ss_dssp HHHTCTTCCEEEEEES-CCCHHHHHHHHHHHHH--HCSCEEEEETTCCCSS---------------------------SE
T ss_pred HHhcCCCCCEEEEEEe-cCCcHHHHHHHHHHHh--CCCCEEEEEeCCCCcc---------------------------cc
Confidence 9999999999999999 88887 889999985 6899999999999864 78
Q ss_pred HcCCcccCCHHHHHHHHHHHHHhH-------hhc--CCCCCCCCCCCCCCCcchHHHhhcCcc
Q 007482 288 DAGAVVPTSYEAFESAIKETFEKL-------VEE--GKIPPVKEVTPPQIPEDLNTAIKSGKV 341 (602)
Q Consensus 288 qaGvi~v~~~~el~~~~~~~~~~~-------~~~--g~~~~~~~~~~~~~~~D~~~a~~~~Li 341 (602)
|+|++|++|++||+++++.|.... .+. ++.++++.+++..+..|.... ++++.
T Consensus 215 ~~Gvirv~~~~el~~~a~~l~~~~~~~~~qp~~~G~rvaivtn~Gg~gvlaaD~~~~-gl~l~ 276 (480)
T 3dmy_A 215 DENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAG-HLGVE 276 (480)
T ss_dssp ETTEEEESSHHHHHHHHHHHHHHHHHHHHHCCCSCCEEEEEESCHHHHHHHHHHHHH-HTTCC
T ss_pred cCCEEEECCHHHHHHHHHHHhcCccccccCCCCCCCeEEEEECCHHHHHHHHHHHHh-CCCCC
Confidence 999999999999999999988742 233 345567777777777776655 44444
No 27
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=99.82 E-value=1.4e-20 Score=173.57 Aligned_cols=118 Identities=8% Similarity=-0.009 Sum_probs=94.6
Q ss_pred CCCCCCCcEEEEee-----C-CcHHHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEE
Q 007482 4 GQLFSKTTQALFYN-----Y-KQLPIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFI 77 (602)
Q Consensus 4 ~~l~~p~s~avv~g-----~-~~~~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlav 77 (602)
++||+|++++|||. . +..++++|++.||+ |++++ |.+ +++.|+++|+|++|+++ ++|+++
T Consensus 9 ~~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~-V~~vn-p~~---------~~i~G~~~~~s~~el~~---~vDlvi 74 (138)
T 1y81_A 9 SNSKEFRKIALVGASKNPAKYGNIILKDLLSKGFE-VLPVN-PNY---------DEIEGLKCYRSVRELPK---DVDVIV 74 (138)
T ss_dssp -----CCEEEEETCCSCTTSHHHHHHHHHHHTTCE-EEEEC-TTC---------SEETTEECBSSGGGSCT---TCCEEE
T ss_pred ccccCCCeEEEEeecCCCCCHHHHHHHHHHHCCCE-EEEeC-CCC---------CeECCeeecCCHHHhCC---CCCEEE
Confidence 57999999999963 1 12389999999998 67886 754 47899999999999864 489999
Q ss_pred EecCChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCcccccccCc
Q 007482 78 NFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGA 140 (602)
Q Consensus 78 i~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~~~~~ 140 (602)
+++|++ .+++++++|.++|++.+++.++++ ++++.++|+++|+|++||||+|+++|..
T Consensus 75 i~vp~~-~v~~v~~~~~~~g~~~i~~~~~~~----~~~l~~~a~~~Gi~~igpnc~g~~~~~~ 132 (138)
T 1y81_A 75 FVVPPK-VGLQVAKEAVEAGFKKLWFQPGAE----SEEIRRFLEKAGVEYSFGRCIMVETSNK 132 (138)
T ss_dssp ECSCHH-HHHHHHHHHHHTTCCEEEECTTSC----CHHHHHHHHHHTCEEECSCCHHHHC---
T ss_pred EEeCHH-HHHHHHHHHHHcCCCEEEEcCccH----HHHHHHHHHHCCCEEEcCCcceEEccCc
Confidence 999975 588889889889999999999886 4688999999999999999999999976
No 28
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=99.81 E-value=3.6e-21 Score=177.97 Aligned_cols=120 Identities=10% Similarity=0.050 Sum_probs=99.8
Q ss_pred CCCC-CCCcEEEEeeC------CcHHHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEE
Q 007482 4 GQLF-SKTTQALFYNY------KQLPIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVF 76 (602)
Q Consensus 4 ~~l~-~p~s~avv~g~------~~~~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDla 76 (602)
+.|| +|+|+||||.. +..++++|+++||+ |++++ |.+.+ +++.|+|||+|++|+++ ++|++
T Consensus 7 ~~ll~~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~-v~~vn-p~~~~-------~~i~G~~~~~sl~el~~---~vDla 74 (140)
T 1iuk_A 7 RAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYR-VLPVN-PRFQG-------EELFGEEAVASLLDLKE---PVDIL 74 (140)
T ss_dssp HHHHHHCCEEEEETCCSSTTSHHHHHHHHHHHTTCE-EEEEC-GGGTT-------SEETTEECBSSGGGCCS---CCSEE
T ss_pred HHHHcCCCEEEEECCCCCCCChHHHHHHHHHHCCCE-EEEeC-CCccc-------CcCCCEEecCCHHHCCC---CCCEE
Confidence 4689 89999999531 12388999999998 77887 86421 68999999999999754 48999
Q ss_pred EEecCChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCcccccccCc
Q 007482 77 INFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGA 140 (602)
Q Consensus 77 vi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~~~~~ 140 (602)
+|++|+. .+++++++|.++|+|.+++ .+|+. ++++.++|+++|+|++||||+|+++|..
T Consensus 75 vi~vp~~-~~~~v~~~~~~~gi~~i~~-~~g~~---~~~~~~~a~~~Gir~vgpnc~g~~~~~~ 133 (140)
T 1iuk_A 75 DVFRPPS-ALMDHLPEVLALRPGLVWL-QSGIR---HPEFEKALKEAGIPVVADRCLMVEHKRL 133 (140)
T ss_dssp EECSCHH-HHTTTHHHHHHHCCSCEEE-CTTCC---CHHHHHHHHHTTCCEEESCCHHHHHHHH
T ss_pred EEEeCHH-HHHHHHHHHHHcCCCEEEE-cCCcC---HHHHHHHHHHcCCEEEcCCccceEChhh
Confidence 9999996 5788899999999997755 56664 5889999999999999999999999865
No 29
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=99.79 E-value=5.1e-20 Score=166.17 Aligned_cols=108 Identities=8% Similarity=0.000 Sum_probs=92.6
Q ss_pred CCCcEEEEeeCC------cHHHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecC
Q 007482 8 SKTTQALFYNYK------QLPIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 81 (602)
Q Consensus 8 ~p~s~avv~g~~------~~~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp 81 (602)
+|+|+||||... .+++++|+++||+ |++|+ |+. ++++|+|||+|++|+++ +|+++|++|
T Consensus 3 ~p~siAVVGaS~~~~~~g~~v~~~L~~~g~~-V~pVn-P~~---------~~i~G~~~y~sl~dlp~----vDlavi~~p 67 (122)
T 3ff4_A 3 AMKKTLILGATPETNRYAYLAAERLKSHGHE-FIPVG-RKK---------GEVLGKTIINERPVIEG----VDTVTLYIN 67 (122)
T ss_dssp CCCCEEEETCCSCTTSHHHHHHHHHHHHTCC-EEEES-SSC---------SEETTEECBCSCCCCTT----CCEEEECSC
T ss_pred CCCEEEEEccCCCCCCHHHHHHHHHHHCCCe-EEEEC-CCC---------CcCCCeeccCChHHCCC----CCEEEEEeC
Confidence 699999996422 2389999999997 46886 854 58999999999999752 699999999
Q ss_pred ChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCccccc
Q 007482 82 FRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGI 136 (602)
Q Consensus 82 ~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~ 136 (602)
++. +++++|+|.++|+|. |++++||. ++++.++||++|||++| ||+|++
T Consensus 68 ~~~-v~~~v~e~~~~g~k~-v~~~~G~~---~~e~~~~a~~~Girvv~-nC~gv~ 116 (122)
T 3ff4_A 68 PQN-QLSEYNYILSLKPKR-VIFNPGTE---NEELEEILSENGIEPVI-GCTLVM 116 (122)
T ss_dssp HHH-HGGGHHHHHHHCCSE-EEECTTCC---CHHHHHHHHHTTCEEEE-SCHHHH
T ss_pred HHH-HHHHHHHHHhcCCCE-EEECCCCC---hHHHHHHHHHcCCeEEC-CcCeEE
Confidence 975 889999999999996 77899995 57899999999999997 999986
No 30
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=99.79 E-value=3.3e-20 Score=172.46 Aligned_cols=120 Identities=14% Similarity=0.052 Sum_probs=101.1
Q ss_pred CCCCC-CCcEEEEee------CCcHHHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEE
Q 007482 4 GQLFS-KTTQALFYN------YKQLPIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVF 76 (602)
Q Consensus 4 ~~l~~-p~s~avv~g------~~~~~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDla 76 (602)
+.||+ |+++||||. ++..++++|++.||+ |++++ |.+. |+++.|.++|+|++|+++ ++|++
T Consensus 7 ~~ll~~p~~IavIGas~~~g~~G~~~~~~L~~~G~~-v~~vn-p~~~-------g~~i~G~~~~~sl~el~~---~~Dlv 74 (145)
T 2duw_A 7 AGILTSTRTIALVGASDKPDRPSYRVMKYLLDQGYH-VIPVS-PKVA-------GKTLLGQQGYATLADVPE---KVDMV 74 (145)
T ss_dssp HHHHHHCCCEEEESCCSCTTSHHHHHHHHHHHHTCC-EEEEC-SSST-------TSEETTEECCSSTTTCSS---CCSEE
T ss_pred HHHHhCCCEEEEECcCCCCCChHHHHHHHHHHCCCE-EEEeC-Cccc-------ccccCCeeccCCHHHcCC---CCCEE
Confidence 46786 999999964 122388999999998 67887 8553 258899999999999754 48999
Q ss_pred EEecCChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCcccccccCc
Q 007482 77 INFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGA 140 (602)
Q Consensus 77 vi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~~~~~ 140 (602)
+|++|+. .+++++++|.++|+|.+++.++.+ ++++.++|+++|+|++||||+|+++|..
T Consensus 75 ii~vp~~-~v~~v~~~~~~~g~~~i~i~~~~~----~~~l~~~a~~~Gi~~igpnc~g~~~~~~ 133 (145)
T 2duw_A 75 DVFRNSE-AAWGVAQEAIAIGAKTLWLQLGVI----NEQAAVLAREAGLSVVMDRCPAIELPRL 133 (145)
T ss_dssp ECCSCST-HHHHHHHHHHHHTCCEEECCTTCC----CHHHHHHHHTTTCEEECSCCHHHHSTTT
T ss_pred EEEeCHH-HHHHHHHHHHHcCCCEEEEcCChH----HHHHHHHHHHcCCEEEcCCeeeEEcccc
Confidence 9999985 588889989889999988887665 6789999999999999999999999987
No 31
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=99.78 E-value=8.7e-20 Score=169.41 Aligned_cols=117 Identities=10% Similarity=0.062 Sum_probs=97.6
Q ss_pred CCCCC-CCcEEEEeeC------CcHHHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEE
Q 007482 4 GQLFS-KTTQALFYNY------KQLPIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVF 76 (602)
Q Consensus 4 ~~l~~-p~s~avv~g~------~~~~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDla 76 (602)
+.||+ |+++||||.. +.+++++|++.||+ |++++ |.+ +++.|++||+|++|+++ ++|++
T Consensus 16 ~~ll~~p~~iaVVGas~~~g~~G~~~~~~l~~~G~~-v~~Vn-p~~---------~~i~G~~~y~sl~~l~~---~vDlv 81 (144)
T 2d59_A 16 REILTRYKKIALVGASPKPERDANIVMKYLLEHGYD-VYPVN-PKY---------EEVLGRKCYPSVLDIPD---KIEVV 81 (144)
T ss_dssp HHHHHHCCEEEEETCCSCTTSHHHHHHHHHHHTTCE-EEEEC-TTC---------SEETTEECBSSGGGCSS---CCSEE
T ss_pred HHHHcCCCEEEEEccCCCCCchHHHHHHHHHHCCCE-EEEEC-CCC---------CeECCeeccCCHHHcCC---CCCEE
Confidence 46886 9999999631 12388999999998 67886 754 47899999999999754 48999
Q ss_pred EEecCChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCcccccccC
Q 007482 77 INFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAG 139 (602)
Q Consensus 77 vi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~~~~ 139 (602)
+|++|+. .+.+++++|.++|+|.++ +.+|+. ++++.++|+++|+|++||||+|+++|.
T Consensus 82 vi~vp~~-~~~~vv~~~~~~gi~~i~-~~~g~~---~~~l~~~a~~~Gi~vvGpnc~gv~~~~ 139 (144)
T 2d59_A 82 DLFVKPK-LTMEYVEQAIKKGAKVVW-FQYNTY---NREASKKADEAGLIIVANRCMMREHER 139 (144)
T ss_dssp EECSCHH-HHHHHHHHHHHHTCSEEE-ECTTCC---CHHHHHHHHHTTCEEEESCCHHHHHHH
T ss_pred EEEeCHH-HHHHHHHHHHHcCCCEEE-ECCCch---HHHHHHHHHHcCCEEEcCCchhhcchh
Confidence 9999996 478889999999999765 566764 688999999999999999999999874
No 32
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=98.17 E-value=5.2e-06 Score=85.04 Aligned_cols=123 Identities=13% Similarity=0.150 Sum_probs=85.7
Q ss_pred CCCCcEEEEeeCCcH----HHHHHHh-cCCeEEEEEeCCC---CCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007482 7 FSKTTQALFYNYKQL----PIQRMLD-FDFLCVAGIINPG---AEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 78 (602)
Q Consensus 7 ~~p~s~avv~g~~~~----~~~~~~~-~g~~~V~gv~~p~---~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi 78 (602)
...+.+++|.|+.|+ +++.+.+ -++++|+.+..++ .+.+..++.|-.-.|+|+|.++++++. ++|++|.
T Consensus 18 m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~---~aDVvID 94 (288)
T 3ijp_A 18 GPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFS---NTEGILD 94 (288)
T ss_dssp ---CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTT---SCSEEEE
T ss_pred ccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhc---CCCEEEE
Confidence 334445555565555 4443333 5788888877432 123555666655679999999999875 4799999
Q ss_pred ecCChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCc-ccc
Q 007482 79 FSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPAT-VGG 135 (602)
Q Consensus 79 ~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc-~G~ 135 (602)
+.++.. ..+.++.|.++|++ +|+-|.||.+++.++|.++|++.++ ++.||. +|+
T Consensus 95 FT~p~a-~~~~~~~~l~~Gv~-vViGTTG~~~e~~~~L~~aa~~~~~-~~a~N~SiGv 149 (288)
T 3ijp_A 95 FSQPQA-SVLYANYAAQKSLI-HIIGTTGFSKTEEAQIADFAKYTTI-VKSGNMSLGV 149 (288)
T ss_dssp CSCHHH-HHHHHHHHHHHTCE-EEECCCCCCHHHHHHHHHHHTTSEE-EECSCCCHHH
T ss_pred cCCHHH-HHHHHHHHHHcCCC-EEEECCCCCHHHHHHHHHHhCcCCE-EEECCCcHHH
Confidence 998764 56677788878987 5566889999888899999987554 888985 454
No 33
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.93 E-value=2.3e-05 Score=79.72 Aligned_cols=118 Identities=21% Similarity=0.258 Sum_probs=83.4
Q ss_pred CcEEEEeeCCcH----HHHHHHh-cCCeEEEEEeCCC---CCCccccccCceeecccccCCHHHHhhcCCCccEEEEecC
Q 007482 10 TTQALFYNYKQL----PIQRMLD-FDFLCVAGIINPG---AEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 81 (602)
Q Consensus 10 ~s~avv~g~~~~----~~~~~~~-~g~~~V~gv~~p~---~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp 81 (602)
..|+|+ |+.|+ +++.+.+ -++++|+.+..++ .+.+..++.|..- |+++|.++++++. ++|++|.+++
T Consensus 8 ikV~V~-Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~-gv~v~~dl~~ll~---~~DVVIDfT~ 82 (272)
T 4f3y_A 8 MKIAIA-GASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQT-GVALTDDIERVCA---EADYLIDFTL 82 (272)
T ss_dssp EEEEES-STTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCC-SCBCBCCHHHHHH---HCSEEEECSC
T ss_pred cEEEEE-CCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCC-CceecCCHHHHhc---CCCEEEEcCC
Confidence 345555 54444 4444444 5788887776332 1224555655333 8999999999876 3799999998
Q ss_pred ChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCc-ccc
Q 007482 82 FRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPAT-VGG 135 (602)
Q Consensus 82 ~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc-~G~ 135 (602)
+.. ....++.|.++|++ +|+-|.||.+.+.++|.+.|++.++ ++.||. +|+
T Consensus 83 p~a-~~~~~~~al~~G~~-vVigTTG~s~~~~~~L~~aa~~~~v-v~a~N~s~Gv 134 (272)
T 4f3y_A 83 PEG-TLVHLDAALRHDVK-LVIGTTGFSEPQKAQLRAAGEKIAL-VFSANMSVGV 134 (272)
T ss_dssp HHH-HHHHHHHHHHHTCE-EEECCCCCCHHHHHHHHHHTTTSEE-EECSCCCHHH
T ss_pred HHH-HHHHHHHHHHcCCC-EEEECCCCCHHHHHHHHHHhccCCE-EEECCCCHHH
Confidence 864 66778888889987 5567899999888899999887554 889984 444
No 34
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=97.72 E-value=6.9e-05 Score=80.23 Aligned_cols=124 Identities=17% Similarity=0.190 Sum_probs=98.0
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHH
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 239 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r 239 (602)
..|+|++++-||+++...++.+...|...+.++.+|+.+. .-.+.+.++.+.+||++++|++.+-.|+.+....++.+.
T Consensus 246 l~g~I~ii~Ng~Gl~~~t~D~i~~~G~~~aN~lD~gG~a~-~e~~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~ 324 (397)
T 3ufx_B 246 LDGNIGIIGNGAGLVMYTLDLVNRVGGKPANFLDIGGGAK-ADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVI 324 (397)
T ss_dssp CSSSEEEEESSHHHHHHHHHHHHHTTCCBSEEEECCSCCC-HHHHHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHH
T ss_pred CCCcEEEEecCccHHHHHHHHHHHcCCCcCCcEecCCCCC-HHHHHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHH
Confidence 5799999999999999999999999999999999999873 346888899999999999999876635666655555443
Q ss_pred h----cCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHH
Q 007482 240 Q----GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKET 307 (602)
Q Consensus 240 ~----~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~ 307 (602)
+ ...+||||+.-.|... ..-...+++.|+...+++++....+..+
T Consensus 325 ~a~~~~~~~kPvvv~~~G~~~-----------------------~~~~~~l~~~gip~~~~~e~Aa~~~~~l 373 (397)
T 3ufx_B 325 RALEEGLLTKPVVMRVAGTAE-----------------------EEAKKLLEGKPVYMYPTSIEAAKVTVAM 373 (397)
T ss_dssp HHHTTTCCCSCEEEEEEEECH-----------------------HHHHHHTTTSSEEECSSHHHHHHHHHHS
T ss_pred HHHHhhCCCCcEEEEccCCCH-----------------------HHHHHHHHhCCCcccCCHHHHHHHHHHH
Confidence 3 3347999999888532 2333578889999989988876665443
No 35
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.69 E-value=4.4e-05 Score=77.68 Aligned_cols=121 Identities=21% Similarity=0.178 Sum_probs=83.0
Q ss_pred CCcEEEEeeCCcH----HHHHHHh-cCCeEEEEEeCCCC---CCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007482 9 KTTQALFYNYKQL----PIQRMLD-FDFLCVAGIINPGA---EGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 80 (602)
Q Consensus 9 p~s~avv~g~~~~----~~~~~~~-~g~~~V~gv~~p~~---~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~v 80 (602)
++.++|+ |.+|+ +++.+.+ -++++|+.+..++. +.+..++.|-.-.|+++|.++++++. ++|++|.++
T Consensus 5 ~mkV~V~-Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~---~~DvVIDft 80 (273)
T 1dih_A 5 NIRVAIA-GAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD---DFDVFIDFT 80 (273)
T ss_dssp BEEEEET-TTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT---SCSEEEECS
T ss_pred CcEEEEE-CCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc---CCCEEEEcC
Confidence 3456655 65444 5555553 57777766663321 22344444434457888999888764 479999888
Q ss_pred CChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCC-ccccc
Q 007482 81 SFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPA-TVGGI 136 (602)
Q Consensus 81 p~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPN-c~G~~ 136 (602)
++.. ....++.|.++|++ +|+-|.||.+++.++|.+.+++.+ .++.|| ++|+.
T Consensus 81 ~p~~-~~~~~~~a~~~G~~-vVigTtG~~~e~~~~L~~~a~~~~-vv~a~N~siGvn 134 (273)
T 1dih_A 81 RPEG-TLNHLAFCRQHGKG-MVIGTTGFDEAGKQAIRDAAADIA-IVFAANFSVGVN 134 (273)
T ss_dssp CHHH-HHHHHHHHHHTTCE-EEECCCCCCHHHHHHHHHHTTTSC-EEECSCCCHHHH
T ss_pred ChHH-HHHHHHHHHhCCCC-EEEECCCCCHHHHHHHHHhcCCCC-EEEEecCcHHHH
Confidence 7764 67778888889988 555577999988888888887755 688898 66664
No 36
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=97.66 E-value=0.00048 Score=75.03 Aligned_cols=127 Identities=16% Similarity=0.167 Sum_probs=96.1
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCce---------------------eEEeeccCCCCCCCCHHHHHHHhhcCCCcc
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVTDGI---------------------YEGIAIGGDVFPGSTLSDHILRFNNIPQVK 218 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g~G~---------------------s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~ 218 (602)
+-++|+++|-||+++...+|.+.+.|+-+ ...+.+|.++. .-.+.+.++-+.+||+++
T Consensus 292 ~g~rvaiitngGG~~~laaD~~~~~Gl~l~~l~~~t~~~L~~~lp~~~~~~NPlDl~g~a~-~~~~~~al~~~l~dp~vd 370 (457)
T 2csu_A 292 RGNKVAIMTNAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAAVKNPVDMIASAR-GEDYYRTAKLLLQDPNVD 370 (457)
T ss_dssp SSSEEEEEESCHHHHHHHHHHHHTTTCEECCCCHHHHHHHHHHSCTTCEESSEEECCTTCC-HHHHHHHHHHHHHSTTCS
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHhCccccccCCCeeCCCCCC-HHHHHHHHHHHhcCCCCC
Confidence 56799999999999999999999988873 35666666651 234788899999999999
Q ss_pred EEEEEEecC----CC-c--HHHHHHHHHhcCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC
Q 007482 219 MMVVLGELG----GR-D--EYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA 291 (602)
Q Consensus 219 ~I~ly~E~g----~~-~--~~~f~~~~r~~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv 291 (602)
+|++.+-++ .. + .+.+.++++++..+|||++...|.+.. ......|+++|+
T Consensus 371 ~vlv~~~~~~~Gg~~~~~~a~~i~~al~~~~~~kPvvv~~~~g~~~----------------------~~~~~~L~~~Gi 428 (457)
T 2csu_A 371 MLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFMAGYVS----------------------EKAKELLEKNGI 428 (457)
T ss_dssp EEEEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEECTTTT----------------------HHHHHHHHTTTC
T ss_pred EEEEEccccccccCCchhHHHHHHHHHHHhcCCCCEEEEeCCCcch----------------------HHHHHHHHhCCC
Confidence 999988422 21 2 356888888765679999965442221 334567899999
Q ss_pred cccCCHHHHHHHHHHHHH
Q 007482 292 VVPTSYEAFESAIKETFE 309 (602)
Q Consensus 292 i~v~~~~el~~~~~~~~~ 309 (602)
...+++++....+..+..
T Consensus 429 p~~~spe~Av~al~~l~~ 446 (457)
T 2csu_A 429 PTYERPEDVASAAYALVE 446 (457)
T ss_dssp CEESSHHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHH
Confidence 999999999888776653
No 37
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=97.47 E-value=0.00079 Score=71.92 Aligned_cols=124 Identities=15% Similarity=0.172 Sum_probs=96.3
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHH----HHH
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY----SLV 235 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~----~f~ 235 (602)
..|+|++++.+|+++...+|.+...|.-...++.+|+.+. .-.+.+.++.+.+||++|+|++.+=-|+.+-. ...
T Consensus 262 l~G~Ig~~~nGaGlam~t~D~i~~~Gg~paNflDvgG~a~-~e~~~~al~~il~d~~v~~ilvni~ggi~~~d~vA~gii 340 (395)
T 2fp4_B 262 LDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVK-ESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGIT 340 (395)
T ss_dssp CSSSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSSCC-HHHHHHHHHHHHHCTTCCEEEEEEEESSSCHHHHHHHHH
T ss_pred cCCeEEEEecCchHHHHHHHHHHHcCCCcCCcEEECCCCC-HHHHHHHHHHHhCCCCCCEEEEEecCCccCcHHHHHHHH
Confidence 4799999999999999999999999988999999999872 34567789999999999999986643676654 455
Q ss_pred HHHHhcCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCccc--CCHHHHHHHHHHH
Q 007482 236 EALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP--TSYEAFESAIKET 307 (602)
Q Consensus 236 ~~~r~~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v--~~~~el~~~~~~~ 307 (602)
+++++...+||||+-..|... +.-...|+++|+-.. +|++|....+.++
T Consensus 341 ~a~~~~~~~~Pivvrl~G~n~-----------------------~~g~~~L~~~gl~~~~~~~~~~Aa~~~v~~ 391 (395)
T 2fp4_B 341 KACRELELKVPLVVRLEGTNV-----------------------HEAQNILTNSGLPITSAVDLEDAAKKAVAS 391 (395)
T ss_dssp HHHHHHTCCSCEEEEEEETTH-----------------------HHHHHHHHHTCSCCEECSSHHHHHHHHHHT
T ss_pred HHHHhcCCCCeEEEEcCCCCH-----------------------HHHHHHHHHCCCceEeCCCHHHHHHHHHHH
Confidence 566665578999997766543 334578888887666 7887766655443
No 38
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=97.37 E-value=0.0017 Score=69.13 Aligned_cols=124 Identities=16% Similarity=0.171 Sum_probs=95.9
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHH----HHH
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY----SLV 235 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~----~f~ 235 (602)
..|+|++++.+|+++...+|.+...|.-...++.+|+.+. .-.+.+.++.+.+||++|+|++.+=-|+.+-. ...
T Consensus 255 l~G~Ig~~~nGaGl~m~t~D~i~~~Gg~~aNflD~gG~a~-~~~~~~~~~~il~d~~v~~ilvni~ggi~~~~~vA~gii 333 (388)
T 2nu8_B 255 LDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGAT-KERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGII 333 (388)
T ss_dssp CSSSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSCCC-HHHHHHHHHHHHTSTTCCEEEEEEESCSSCHHHHHHHHH
T ss_pred CCCEEEEEeCCCchhhhhhHHHHHcCCCcCceeEecCCCC-HHHHHHHHHHHhcCCCCCEEEEEecCCcCCchHHHHHHH
Confidence 4899999999999999999999999988999999999872 34567788888999999999998754666644 455
Q ss_pred HHHHhcCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCccc--CCHHHHHHHHHHH
Q 007482 236 EALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP--TSYEAFESAIKET 307 (602)
Q Consensus 236 ~~~r~~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v--~~~~el~~~~~~~ 307 (602)
+++++...+||||+-..|... +.-...|++.|+-.. +|++|....+.++
T Consensus 334 ~a~~~~~~~~pivvrl~G~n~-----------------------~~g~~~l~~~g~~~~~~~~~~~aa~~~v~~ 384 (388)
T 2nu8_B 334 GAVAEVGVNVPVVVRLEGNNA-----------------------ELGAKKLADSGLNIIAAKGLTDAAQQVVAA 384 (388)
T ss_dssp HHHHHHTCCSCEEEEEESTTH-----------------------HHHHHHHHTTCSSEEECSSHHHHHHHHHHH
T ss_pred HHHHhcCCCCeEEEEeCCCCH-----------------------HHHHHHHHHCCCceecCCCHHHHHHHHHHH
Confidence 566665578999997666443 344578888887666 7777766655443
No 39
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=97.11 E-value=0.013 Score=63.87 Aligned_cols=128 Identities=22% Similarity=0.204 Sum_probs=87.0
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCcee----------------EEe-------eccCCCCCCC----CHHHHHHHhh
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVTDGIY----------------EGI-------AIGGDVFPGS----TLSDHILRFN 212 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s----------------~~v-------s~Gn~~~~dv----~~~d~l~~l~ 212 (602)
+-.+|++||-||+++....+.+.+ |+++. ..+ |.||-. |+ .+.+.++-+.
T Consensus 248 ~G~rvaivtn~Gg~gvlaaD~~~~-gl~l~~ls~~t~~~l~~~~~~~l~~~lp~~~s~~NPv--D~~d~~~~~~al~~~l 324 (480)
T 3dmy_A 248 SSGFICGLYTGGTLAAEAAGLLAG-HLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPH--PMIDPTLRNQLIADLG 324 (480)
T ss_dssp SCCEEEEEESCHHHHHHHHHHHHH-HTTCC---CCGGGEEEEETTEEEEETTSHHHHTTSCC--TTTCCHHHHHHHHHGG
T ss_pred CCCeEEEEECCHHHHHHHHHHHHh-CCCCCCCCHHHHhhhhhhhhccHHHhCcchhhccCCc--CCCCHHHHHHHHHHHh
Confidence 345799999999999999999887 66543 333 455655 44 3778899999
Q ss_pred cCCCccEEEE-EE--ecCCCcH-HHHHHHHHhcC----CCCC--EEEEEeCcCccCccccccccccCCcCCCCcchHHHH
Q 007482 213 NIPQVKMMVV-LG--ELGGRDE-YSLVEALKQGK----VNKP--VVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAK 282 (602)
Q Consensus 213 ~Dp~t~~I~l-y~--E~g~~~~-~~f~~~~r~~~----~~KP--Vv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~ 282 (602)
+||++.+|++ |+ -....++ ...++++.+++ .+|| ++++-.|..... + . ....
T Consensus 325 ~D~~vd~vlv~~v~~~~~~~d~~~~~a~ai~~~~~~~~~~kp~v~v~~~~g~~~~~--~-------------~---~~~~ 386 (480)
T 3dmy_A 325 AKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDP--Q-------------C---RSQQ 386 (480)
T ss_dssp GCTTEEEEEEEEECSTTSCSCHHHHHHHHHHHHHHTSCTTSCCEEEEEEESCTTST--T-------------C---HHHH
T ss_pred cCCCCCEEEEEeecCCCCCCChHHHHHHHHHHHHHhccCCCCeEEEEEecCcccch--h-------------h---HHHH
Confidence 9999998887 23 1123555 66666554432 2799 455555543111 0 0 0234
Q ss_pred HHHHHHcCCcccCCHHHHHHHHHHHH
Q 007482 283 NQALRDAGAVVPTSYEAFESAIKETF 308 (602)
Q Consensus 283 ~a~~~qaGvi~v~~~~el~~~~~~~~ 308 (602)
...|+++||..-+++++...++..+.
T Consensus 387 ~~~L~~aGIp~f~spe~Av~a~~~l~ 412 (480)
T 3dmy_A 387 IATLEDAGIAVVSSLPEATLLAAALI 412 (480)
T ss_dssp HHHHHHTTCEECSSHHHHHHHHHHHT
T ss_pred HHHHHhCCCcccCCHHHHHHHHHHHH
Confidence 46899999999999999888776665
No 40
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.07 E-value=0.0012 Score=65.97 Aligned_cols=107 Identities=12% Similarity=0.003 Sum_probs=72.5
Q ss_pred CcEEEEee-CCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhHH
Q 007482 10 TTQALFYN-YKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAA 87 (602)
Q Consensus 10 ~s~avv~g-~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~ 87 (602)
+.++|+|. ..|+ +++.+.+.+.++|+.+. +... +-.|+|+|.+++++. ++|++|.+..+.. +.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d-~~~~---------~~~gv~v~~dl~~l~----~~DVvIDft~p~a-~~ 68 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIE-NTPK---------ATTPYQQYQHIADVK----GADVAIDFSNPNL-LF 68 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEEC-SSCC-----------CCSCBCSCTTTCT----TCSEEEECSCHHH-HH
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEe-cCcc---------ccCCCceeCCHHHHh----CCCEEEEeCChHH-HH
Confidence 46777752 2233 45555554448887776 4322 246899999999864 3799997887764 55
Q ss_pred HHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCc-ccc
Q 007482 88 SSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPAT-VGG 135 (602)
Q Consensus 88 ~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc-~G~ 135 (602)
..++ .++|++. |+-|.||.+++.++|.+.|++.++ ++-||. +|+
T Consensus 69 ~~~~--l~~g~~v-VigTTG~s~e~~~~l~~aa~~~~v-~~a~N~S~Gv 113 (243)
T 3qy9_A 69 PLLD--EDFHLPL-VVATTGEKEKLLNKLDELSQNMPV-FFSANMSYGV 113 (243)
T ss_dssp HHHT--SCCCCCE-EECCCSSHHHHHHHHHHHTTTSEE-EECSSCCHHH
T ss_pred HHHH--HhcCCce-EeCCCCCCHHHHHHHHHHHhcCCE-EEECCccHHH
Confidence 5566 4578874 567889998888899999988555 888884 454
No 41
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.06 E-value=0.0017 Score=67.36 Aligned_cols=111 Identities=16% Similarity=0.048 Sum_probs=74.4
Q ss_pred CCCcEEEEe-eCCc--HHHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 8 SKTTQALFY-NYKQ--LPIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 8 ~p~s~avv~-g~~~--~~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
+|..++||| |..+ .+++.+.+. ++++|+... +.. +..|+++|.+++|++...+++|+++|++|..
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d-~~~----------~~~g~~~~~~~~~ll~~~~~vD~V~i~tp~~ 92 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKNANFKLVATAS-RHG----------TVEGVNSYTTIEAMLDAEPSIDAVSLCMPPQ 92 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEEC-SSC----------CCTTSEEESSHHHHHHHCTTCCEEEECSCHH
T ss_pred CCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEe-CCh----------hhcCCCccCCHHHHHhCCCCCCEEEEeCCcH
Confidence 455788886 2222 367777764 677775554 432 2357899999999987523699999999987
Q ss_pred hhHHHHHHHhhCCCCcEEEEec-CCCCHHHHHHHHHHHHhCCCe-eEcCC
Q 007482 84 SAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPA 131 (602)
Q Consensus 84 ~~~~~~~e~~~~~gv~~~viis-~Gf~E~~~~~l~~~a~~~g~r-iiGPN 131 (602)
...+.+++++. +|. .+++=- -.....+.++|++.|+++|+. .+|.|
T Consensus 93 ~H~~~~~~al~-aGk-hVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~ 140 (330)
T 4ew6_A 93 YRYEAAYKALV-AGK-HVFLEKPPGATLSEVADLEALANKQGASLFASWH 140 (330)
T ss_dssp HHHHHHHHHHH-TTC-EEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCG
T ss_pred HHHHHHHHHHH-cCC-cEEEeCCCCCCHHHHHHHHHHHHhcCCeEEEEeh
Confidence 75555555555 784 444321 144555778999999999985 44444
No 42
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.04 E-value=0.0012 Score=68.99 Aligned_cols=117 Identities=13% Similarity=-0.011 Sum_probs=77.3
Q ss_pred CCcEEEEe-eCCc-HHHHHHHhc--CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 9 KTTQALFY-NYKQ-LPIQRMLDF--DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 9 p~s~avv~-g~~~-~~~~~~~~~--g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+..++||| |..+ .+++.+.+. ++++|+..+ +.... .+.+ .+-.|+++|.+.+|++... ++|+++|++|...
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d-~~~~~-~~~~--~~~~~~~~~~~~~~ll~~~-~~D~V~i~tp~~~ 87 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCD-IDPAA-LKAA--VERTGARGHASLTDMLAQT-DADIVILTTPSGL 87 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEEC-SSHHH-HHHH--HHHHCCEEESCHHHHHHHC-CCSEEEECSCGGG
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEc-CCHHH-HHHH--HHHcCCceeCCHHHHhcCC-CCCEEEECCCcHH
Confidence 44788886 4334 377888876 778776665 42211 1111 1234679999999988653 6999999999987
Q ss_pred hHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCee-EcCCc
Q 007482 85 AAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV-IGPAT 132 (602)
Q Consensus 85 ~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~ri-iGPNc 132 (602)
..+.+.+++. +|. .+++- .-.....+.++|.+.|+++|+.+ +|.|.
T Consensus 88 h~~~~~~al~-~gk-~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~ 135 (354)
T 3q2i_A 88 HPTQSIECSE-AGF-HVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQN 135 (354)
T ss_dssp HHHHHHHHHH-TTC-EEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGG
T ss_pred HHHHHHHHHH-CCC-CEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcc
Confidence 5555555555 774 45442 22455667889999999999865 56543
No 43
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=96.98 E-value=0.0017 Score=63.89 Aligned_cols=110 Identities=13% Similarity=0.130 Sum_probs=74.6
Q ss_pred cEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhHHH
Q 007482 11 TQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAAS 88 (602)
Q Consensus 11 s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~ 88 (602)
++++|| |..|+ +.+++.+.|+++++..+ +.... ++ .|.+++|+.. +++|++++++|.... .+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d-~~~~~-------~~-----~~~~~~~l~~--~~~DvVv~~~~~~~~-~~ 65 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILD-VRGEH-------EK-----MVRGIDEFLQ--REMDVAVEAASQQAV-KD 65 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEEC-SSCCC-------TT-----EESSHHHHTT--SCCSEEEECSCHHHH-HH
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEe-cCcch-------hh-----hcCCHHHHhc--CCCCEEEECCCHHHH-HH
Confidence 578886 33333 77777778898876555 42210 11 7899999864 258999999998754 44
Q ss_pred HHHHhhCCCCcEEEEecCCCCH-HHH-HHHHHHHHhCCCe-eEcCCcccccc
Q 007482 89 SMAALKQPTIRVVAIIAEGVPE-ADT-KQLIAYARSNNKV-VIGPATVGGIQ 137 (602)
Q Consensus 89 ~~e~~~~~gv~~~viis~Gf~E-~~~-~~l~~~a~~~g~r-iiGPNc~G~~~ 137 (602)
....+.++|.. +++.+.+... .+. ++|.+.++++|.. ++-||+.|-++
T Consensus 66 ~~~~~l~~G~~-vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~~ 116 (236)
T 2dc1_A 66 YAEKILKAGID-LIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLD 116 (236)
T ss_dssp HHHHHHHTTCE-EEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCHH
T ss_pred HHHHHHHCCCc-EEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccChH
Confidence 44555557764 6666666533 233 7899999999988 67888877654
No 44
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.97 E-value=0.0061 Score=60.81 Aligned_cols=100 Identities=15% Similarity=0.239 Sum_probs=69.6
Q ss_pred cEEEEeeCCc---H-HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 11 TQALFYNYKQ---L-PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 11 s~avv~g~~~---~-~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
.++|+ |.+| + +++.+.+. ++++|+.+. ++ .+++++... ++|++|.+.++. +
T Consensus 2 kV~V~-Ga~G~mG~~i~~~~~~~~~~elva~~d-~~-------------------~dl~~~~~~--~~DvvIDfT~p~-a 57 (245)
T 1p9l_A 2 RVGVL-GAKGKVGTTMVRAVAAADDLTLSAELD-AG-------------------DPLSLLTDG--NTEVVIDFTHPD-V 57 (245)
T ss_dssp EEEEE-TTTSHHHHHHHHHHHHCTTCEEEEEEC-TT-------------------CCTHHHHHT--TCCEEEECSCTT-T
T ss_pred EEEEE-CCCCHHHHHHHHHHHhCCCCEEEEEEc-cC-------------------CCHHHHhcc--CCcEEEEccChH-H
Confidence 46777 4444 3 55555544 888876664 21 235555432 379999898876 4
Q ss_pred HHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhC-CCe-eEcCC-cccc
Q 007482 86 AASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSN-NKV-VIGPA-TVGG 135 (602)
Q Consensus 86 ~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~-g~r-iiGPN-c~G~ 135 (602)
....++.|.++|++ +||-|.||.+++.++|.+.|+++ ++. ++.|| ++|+
T Consensus 58 ~~~~~~~a~~~g~~-~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv 109 (245)
T 1p9l_A 58 VMGNLEFLIDNGIH-AVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGA 109 (245)
T ss_dssp HHHHHHHHHHTTCE-EEECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCCHHH
T ss_pred HHHHHHHHHHcCCC-EEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCccHHH
Confidence 67788888889987 45558899998888899999976 774 88998 4444
No 45
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=96.95 E-value=0.0012 Score=68.89 Aligned_cols=118 Identities=9% Similarity=-0.000 Sum_probs=78.1
Q ss_pred CCCcEEEEe-eCCc-HHHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 8 SKTTQALFY-NYKQ-LPIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 8 ~p~s~avv~-g~~~-~~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
.|.+++||| |..+ .+++.+.+. ++++|+..+ +... +.+.+ .+-.|++.|.+++|++... ++|+++|++|...
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d-~~~~-~~~~~--~~~~g~~~~~~~~~~l~~~-~~D~V~i~tp~~~ 78 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYS-RTED-KREKF--GKRYNCAGDATMEALLARE-DVEMVIITVPNDK 78 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEC-SSHH-HHHHH--HHHHTCCCCSSHHHHHHCS-SCCEEEECSCTTS
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEEC-CCHH-HHHHH--HHHcCCCCcCCHHHHhcCC-CCCEEEEeCChHH
Confidence 456788886 3223 377777775 778776555 4221 11111 1235789999999998543 6999999999987
Q ss_pred hHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 85 AAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 85 ~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
..+.+.+++. +|.+ +++- .-.....+.++|.+.|+++|+. .+|.|.
T Consensus 79 h~~~~~~al~-~gk~-vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~ 126 (354)
T 3db2_A 79 HAEVIEQCAR-SGKH-IYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSS 126 (354)
T ss_dssp HHHHHHHHHH-TTCE-EEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGG
T ss_pred HHHHHHHHHH-cCCE-EEEccCCCCCHHHHHHHHHHHHHcCCeEEEeech
Confidence 6665555555 7854 4443 2356666788999999999986 455544
No 46
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.89 E-value=0.007 Score=62.48 Aligned_cols=118 Identities=18% Similarity=0.058 Sum_probs=73.9
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeeccc-ccCCHHHHhhcCCCccEEEEecCCh
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIP-VHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~-~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
++..++||| |..++ +++.+... ++++++..+ +.... .+.+ .+-.|++ +|.+.+|++.. +++|+++|++|..
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d-~~~~~-~~~~--a~~~~~~~~~~~~~~ll~~-~~~D~V~i~tp~~ 78 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSS-RTLES-AQAF--ANKYHLPKAYDKLEDMLAD-ESIDVIYVATINQ 78 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEEC-SCSST-TCC-----CCCCSCEESCHHHHHTC-TTCCEEEECSCGG
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEc-CCHHH-HHHH--HHHcCCCcccCCHHHHhcC-CCCCEEEECCCcH
Confidence 345788886 33333 66777664 566665554 42221 1111 2334665 89999998864 3699999999998
Q ss_pred hhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 84 SAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 84 ~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
...+.+.+++. +|.. +++= .-.....+.++|++.|+++|+. .+|.|.
T Consensus 79 ~h~~~~~~al~-aGk~-Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~ 127 (329)
T 3evn_A 79 DHYKVAKAALL-AGKH-VLVEKPFTLTYDQANELFALAESCNLFLMEAQKS 127 (329)
T ss_dssp GHHHHHHHHHH-TTCE-EEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSS
T ss_pred HHHHHHHHHHH-CCCe-EEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcc
Confidence 75555555554 7854 4442 2245556788999999999986 445443
No 47
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.88 E-value=0.0049 Score=63.17 Aligned_cols=115 Identities=14% Similarity=0.056 Sum_probs=74.6
Q ss_pred CCcEEEEe-eCCc-HHHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 9 KTTQALFY-NYKQ-LPIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 9 p~s~avv~-g~~~-~~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
+.+++||| |..| .+++.+.+. ++++|+.++ +... +.+.+. ++ +++|.+.++++.. +++|+++|++|+...
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d-~~~~-~~~~~~-~~---~~~~~~~~~~l~~-~~~D~V~i~tp~~~h 82 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLAS-SNPD-NLALVP-PG---CVIESDWRSVVSA-PEVEAVIIATPPATH 82 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEE-SCHH-HHTTCC-TT---CEEESSTHHHHTC-TTCCEEEEESCGGGH
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEe-CCHH-HHHHHH-hh---CcccCCHHHHhhC-CCCCEEEEeCChHHH
Confidence 45788887 3333 378888774 677776665 4221 111111 12 5789999998753 258999999999765
Q ss_pred HHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 86 AASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 86 ~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
.+.+.+++ ++|. .+++- .-.....+.++|.+.|+++|+. .+|.|.
T Consensus 83 ~~~~~~al-~~Gk-~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~ 129 (315)
T 3c1a_A 83 AEITLAAI-ASGK-AVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQ 129 (315)
T ss_dssp HHHHHHHH-HTTC-EEEEESSSCSCHHHHHHHHHHHHHHCCCEEEECGG
T ss_pred HHHHHHHH-HCCC-cEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEeech
Confidence 55555544 4774 45543 3355666788999999999976 566554
No 48
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.83 E-value=0.007 Score=62.26 Aligned_cols=118 Identities=14% Similarity=-0.050 Sum_probs=76.8
Q ss_pred CCcEEEEee--CCc-HHHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhh-------cCCCccEEEE
Q 007482 9 KTTQALFYN--YKQ-LPIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACA-------AHPMADVFIN 78 (602)
Q Consensus 9 p~s~avv~g--~~~-~~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~-------~~p~vDlavi 78 (602)
+..++|||. ..+ ++++.+.+.+.++|+.++ +.... .. ..+...+.++|.+.+++.. +.+++|+++|
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d-~~~~~--~~-~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I 78 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLD-PATNV--GL-VDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSI 78 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEEC-SSCCC--GG-GGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEE
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEc-CCHHH--HH-HHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEE
Confidence 357888852 223 378888888888887666 53221 11 1123346889999999872 2247999999
Q ss_pred ecCChhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCee-EcCCc
Q 007482 79 FSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV-IGPAT 132 (602)
Q Consensus 79 ~vp~~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~ri-iGPNc 132 (602)
++|...-.+.+.+++. +|.. +++= .-.....+.++|++.|+++|+.+ +|-|.
T Consensus 79 ~tP~~~H~~~~~~al~-aGkh-Vl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~ 132 (312)
T 3o9z_A 79 ASPNHLHYPQIRMALR-LGAN-ALSEKPLVLWPEEIARLKELEARTGRRVYTVLQL 132 (312)
T ss_dssp CSCGGGHHHHHHHHHH-TTCE-EEECSSSCSCHHHHHHHHHHHHHHCCCEEECCGG
T ss_pred CCCchhhHHHHHHHHH-CCCe-EEEECCCCCCHHHHHHHHHHHHHcCCEEEEEeeh
Confidence 9999875555555555 7854 4431 11344557889999999999864 55543
No 49
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.76 E-value=0.0062 Score=62.06 Aligned_cols=112 Identities=13% Similarity=-0.023 Sum_probs=71.8
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHh----cCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecC
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLD----FDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 81 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~----~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp 81 (602)
+|..++||| |..|+ +++.+.. .++++++..+ +... .+..|++ |.|++|++.. +++|+++|++|
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d-~~~~--------a~~~g~~-~~~~~ell~~-~~vD~V~i~tp 74 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVS-RREL--------GSLDEVR-QISLEDALRS-QEIDVAYICSE 74 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEEC-SSCC--------CEETTEE-BCCHHHHHHC-SSEEEEEECSC
T ss_pred CcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEEC-chHH--------HHHcCCC-CCCHHHHhcC-CCCCEEEEeCC
Confidence 355788885 32233 6666654 3566654443 3221 2334666 6899998764 36999999999
Q ss_pred ChhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 82 FRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 82 ~~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
.....+.+++++. +|.. +++= .-.....+.++|++.|+++|+. .+|++.
T Consensus 75 ~~~H~~~~~~al~-aGkh-Vl~EKPla~~~~ea~~l~~~a~~~g~~~~~~~~~ 125 (294)
T 1lc0_A 75 SSSHEDYIRQFLQ-AGKH-VLVEYPMTLSFAAAQELWELAAQKGRVLHEEHVE 125 (294)
T ss_dssp GGGHHHHHHHHHH-TTCE-EEEESCSCSCHHHHHHHHHHHHHTTCCEEEECGG
T ss_pred cHhHHHHHHHHHH-CCCc-EEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEEhH
Confidence 9876666666655 7754 5442 1233445778999999999986 556654
No 50
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=96.75 E-value=0.0049 Score=64.25 Aligned_cols=115 Identities=15% Similarity=0.070 Sum_probs=75.9
Q ss_pred CCCcEEEEe-eCCcH--HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 8 SKTTQALFY-NYKQL--PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 8 ~p~s~avv~-g~~~~--~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
+|..++||| |..++ +++.+.+. ++++|+.+. +.... .+ .+..+.++|.+++|++.. +++|+++|++|..
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d-~~~~~-~~----~~~~~~~~~~~~~~ll~~-~~vD~V~i~tp~~ 78 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSS-SDASK-VH----ADWPAIPVVSDPQMLFND-PSIDLIVIPTPND 78 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEEC-SCHHH-HH----TTCSSCCEESCHHHHHHC-SSCCEEEECSCTT
T ss_pred CCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEEC-CCHHH-HH----hhCCCCceECCHHHHhcC-CCCCEEEEeCChH
Confidence 456788886 33333 56666664 677776555 42211 01 234578999999999875 4699999999998
Q ss_pred hhHHHHHHHhhCCCCcEEEEecC-CCCHHHHHHHHHHHHhCCCee-EcCC
Q 007482 84 SAAASSMAALKQPTIRVVAIIAE-GVPEADTKQLIAYARSNNKVV-IGPA 131 (602)
Q Consensus 84 ~~~~~~~e~~~~~gv~~~viis~-Gf~E~~~~~l~~~a~~~g~ri-iGPN 131 (602)
...+.+++++. +|. .+++=-. .....+.++|.+.|+++|+.+ +|-|
T Consensus 79 ~H~~~~~~al~-aGk-hV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~ 126 (352)
T 3kux_A 79 THFPLAQSALA-AGK-HVVVDKPFTVTLSQANALKEHADDAGLLLSVFHN 126 (352)
T ss_dssp THHHHHHHHHH-TTC-EEEECSSCCSCHHHHHHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHH-CCC-cEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEee
Confidence 76666666555 784 4554221 455557889999999999864 4444
No 51
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.74 E-value=0.0065 Score=62.77 Aligned_cols=115 Identities=9% Similarity=-0.002 Sum_probs=74.0
Q ss_pred CCCcEEEEe-eCCcH--HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 8 SKTTQALFY-NYKQL--PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 8 ~p~s~avv~-g~~~~--~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
++..++||| |..+. .++.+...++++|+..+ +.... .+.+ .++..+.++|.+.+|++.. +++|+++|++|...
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d-~~~~~-~~~~-a~~~~~~~~~~~~~~ll~~-~~~D~V~i~tp~~~ 78 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFE-SDSDN-RAKF-TSLFPSVPFAASAEQLITD-ASIDLIACAVIPCD 78 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEEC-SCTTS-CHHH-HHHSTTCCBCSCHHHHHTC-TTCCEEEECSCGGG
T ss_pred CccEEEEECCChHHHHHhhhhhcCCCcEEEEEeC-CCHHH-HHHH-HHhcCCCcccCCHHHHhhC-CCCCEEEEeCChhh
Confidence 466899996 33332 45555556888876665 42221 1111 1122267899999998864 36999999999987
Q ss_pred hHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCeeE
Q 007482 85 AAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVVI 128 (602)
Q Consensus 85 ~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~rii 128 (602)
..+.+++++. +|.. +++= .-.....+.++|++.|+++|+.+.
T Consensus 79 h~~~~~~al~-aGkh-Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 121 (336)
T 2p2s_A 79 RAELALRTLD-AGKD-FFTAKPPLTTLEQLDAVQRRVAETGRKFA 121 (336)
T ss_dssp HHHHHHHHHH-TTCE-EEECSSCCSCHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHHHH-CCCc-EEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 6666666665 7754 4442 123455577899999999998754
No 52
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.71 E-value=0.0094 Score=61.46 Aligned_cols=117 Identities=13% Similarity=-0.065 Sum_probs=76.7
Q ss_pred CcEEEEee--CCc-HHHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhh--------cCCCccEEEE
Q 007482 10 TTQALFYN--YKQ-LPIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACA--------AHPMADVFIN 78 (602)
Q Consensus 10 ~s~avv~g--~~~-~~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~--------~~p~vDlavi 78 (602)
..++|||. ..+ ++++.+.+.+.++|+.++ +.... ..+ .....+.++|.+.+++.+ ..+++|+++|
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d-~~~~~--~~~-~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I 79 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYD-INDSV--GII-DSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSI 79 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEEC-SSCCC--GGG-GGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEE
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEc-CCHHH--HHH-HhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEE
Confidence 46788852 223 378888878888877665 53221 111 123347889999999873 1247999999
Q ss_pred ecCChhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCee-EcCCc
Q 007482 79 FSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV-IGPAT 132 (602)
Q Consensus 79 ~vp~~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~ri-iGPNc 132 (602)
++|.....+-+++++. +|.. +++= .-.....+.++|++.|+++|+.+ +|.|.
T Consensus 80 ~tP~~~H~~~~~~al~-aGkh-Vl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~ 133 (318)
T 3oa2_A 80 CSPNYLHYPHIAAGLR-LGCD-VICEKPLVPTPEMLDQLAVIERETDKRLYNILQL 133 (318)
T ss_dssp CSCGGGHHHHHHHHHH-TTCE-EEECSSCCSCHHHHHHHHHHHHHHTCCEEECCGG
T ss_pred CCCcHHHHHHHHHHHH-CCCe-EEEECCCcCCHHHHHHHHHHHHHhCCEEEEEEhh
Confidence 9999876566666555 7854 4431 11445557889999999999864 66553
No 53
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.67 E-value=0.0032 Score=66.04 Aligned_cols=116 Identities=13% Similarity=0.023 Sum_probs=75.9
Q ss_pred CCCcEEEEe-eCCc-HHHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 8 SKTTQALFY-NYKQ-LPIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 8 ~p~s~avv~-g~~~-~~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
++..++||| |..| .+++.+.+. ++++++.++ +... +.+. .+-.|+++|.|++|++.. +++|+++|++|...
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d-~~~~-~~~~---a~~~g~~~~~~~~~ll~~-~~~D~V~i~tp~~~ 77 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFD-ILAE-KREA---AAQKGLKIYESYEAVLAD-EKVDAVLIATPNDS 77 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEEC-SSHH-HHHH---HHTTTCCBCSCHHHHHHC-TTCCEEEECSCGGG
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEc-CCHH-HHHH---HHhcCCceeCCHHHHhcC-CCCCEEEEcCCcHH
Confidence 345788886 3223 377777775 677765555 4221 1111 123578999999998864 36999999999987
Q ss_pred hHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCee-EcCC
Q 007482 85 AAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV-IGPA 131 (602)
Q Consensus 85 ~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~ri-iGPN 131 (602)
..+.+.+++. +|. .+++= .-.....+.++|++.|+++|+.+ +|-|
T Consensus 78 h~~~~~~al~-aGk-hVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~ 124 (359)
T 3e18_A 78 HKELAISALE-AGK-HVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQN 124 (359)
T ss_dssp HHHHHHHHHH-TTC-EEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECG
T ss_pred HHHHHHHHHH-CCC-CEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEee
Confidence 6666666555 784 45542 12455557889999999999864 4544
No 54
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.65 E-value=0.0034 Score=65.50 Aligned_cols=114 Identities=7% Similarity=-0.025 Sum_probs=73.2
Q ss_pred CcEEEEe-eCCcH--HHHHHHhc-CCeEEEEEeCCCCCCccccccCce--eecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 10 TTQALFY-NYKQL--PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQE--EIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 10 ~s~avv~-g~~~~--~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~--v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
..++||| |..++ +++.+... ++++++.++ +.+. +.+ .++ +.|.++|.|++|++.. +++|+++|++|..
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d-~~~~---~~~-a~~~~~~~~~~~~~~~~ll~~-~~~D~V~i~tp~~ 76 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFD-LHVN---EKA-AAPFKEKGVNFTADLNELLTD-PEIELITICTPAH 76 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEEC-TTCC---HHH-HHHHHTTTCEEESCTHHHHSC-TTCCEEEECSCGG
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEEC-CCHH---HHH-HHhhCCCCCeEECCHHHHhcC-CCCCEEEEeCCcH
Confidence 4678885 33233 45555553 677776665 5422 111 001 1578899999999875 4699999999998
Q ss_pred hhHHHHHHHhhCCCCcEEEEec-CCCCHHHHHHHHHHHHhCCCee-EcCC
Q 007482 84 SAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKVV-IGPA 131 (602)
Q Consensus 84 ~~~~~~~e~~~~~gv~~~viis-~Gf~E~~~~~l~~~a~~~g~ri-iGPN 131 (602)
...+.+++++. +| |.+++=- -.....+.++|.+.|+++|+.+ +|.|
T Consensus 77 ~h~~~~~~al~-aG-k~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~ 124 (349)
T 3i23_A 77 THYDLAKQAIL-AG-KSVIVEKPFCDTLEHAEELFALGQEKGVVVMPYQN 124 (349)
T ss_dssp GHHHHHHHHHH-TT-CEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHH-cC-CEEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEec
Confidence 76666666555 78 4455421 1344557889999999999874 4444
No 55
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.64 E-value=0.0032 Score=65.83 Aligned_cols=112 Identities=13% Similarity=-0.083 Sum_probs=73.9
Q ss_pred CCcEEEEe-eCCcH--HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 9 KTTQALFY-NYKQL--PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 9 p~s~avv~-g~~~~--~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+..++||| |..++ +++.+.+. ++++++.++ +... +.+.+ .+-.|++.|.+++|++.. +++|+++|++|...
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~--a~~~g~~~~~~~~~ll~~-~~~D~V~i~tp~~~ 101 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIAS-RRWD-RAKRF--TERFGGEPVEGYPALLER-DDVDAVYVPLPAVL 101 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEE-SSHH-HHHHH--HHHHCSEEEESHHHHHTC-TTCSEEEECCCGGG
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEc-CCHH-HHHHH--HHHcCCCCcCCHHHHhcC-CCCCEEEECCCcHH
Confidence 44688886 32232 67777775 777776655 4221 11111 123578999999998864 36999999999987
Q ss_pred hHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCee
Q 007482 85 AAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV 127 (602)
Q Consensus 85 ~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~ri 127 (602)
..+.+.+++. +|.. +++= .-.....+.++|.+.|+++|+.+
T Consensus 102 h~~~~~~al~-aGk~-Vl~EKP~a~~~~ea~~l~~~a~~~g~~~ 143 (350)
T 3rc1_A 102 HAEWIDRALR-AGKH-VLAEKPLTTDRPQAERLFAVARERGLLL 143 (350)
T ss_dssp HHHHHHHHHH-TTCE-EEEESSSCSSHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHH-CCCc-EEEeCCCCCCHHHHHHHHHHHHHhCCEE
Confidence 5555555554 7865 4432 22556667889999999999864
No 56
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.62 E-value=0.0051 Score=64.42 Aligned_cols=115 Identities=10% Similarity=0.006 Sum_probs=75.4
Q ss_pred CCCcEEEEe-eCCcH--HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 8 SKTTQALFY-NYKQL--PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 8 ~p~s~avv~-g~~~~--~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
++..++||| |..++ +++.+... ++++++.++ +.... . .++..+.++|.+++|++.. +++|+++|++|..
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d-~~~~~-~----~~~~~~~~~~~~~~~ll~~-~~vD~V~i~tp~~ 76 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVE-RSKEL-S----KERYPQASIVRSFKELTED-PEIDLIVVNTPDN 76 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEEC-SSCCG-G----GTTCTTSEEESCSHHHHTC-TTCCEEEECSCGG
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEc-CCHHH-H----HHhCCCCceECCHHHHhcC-CCCCEEEEeCChH
Confidence 345788885 22233 45556554 677776555 53221 1 1233378999999999875 4699999999998
Q ss_pred hhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCee-EcCC
Q 007482 84 SAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV-IGPA 131 (602)
Q Consensus 84 ~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~ri-iGPN 131 (602)
...+.+++++. +|. .+++= .-.....+.++|++.|+++|+.+ +|.|
T Consensus 77 ~H~~~~~~al~-aGk-hVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~ 124 (362)
T 3fhl_A 77 THYEYAGMALE-AGK-NVVVEKPFTSTTKQGEELIALAKKKGLMLSVYQN 124 (362)
T ss_dssp GHHHHHHHHHH-TTC-EEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECG
T ss_pred HHHHHHHHHHH-CCC-eEEEecCCCCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 76666666555 785 45542 22455567889999999999864 4555
No 57
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=96.62 E-value=0.0062 Score=63.93 Aligned_cols=120 Identities=9% Similarity=-0.028 Sum_probs=74.9
Q ss_pred CCCCCcEEEEe-eCCcH--HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCC
Q 007482 6 LFSKTTQALFY-NYKQL--PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 6 l~~p~s~avv~-g~~~~--~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~ 82 (602)
+.+|-.++||| |..+. .+..+..-++++|+.++ +.... .+.+ .++..+.++|.+++|++.. +++|+++|++|.
T Consensus 23 Mm~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d-~~~~~-a~~~-a~~~~~~~~~~~~~~ll~~-~~vD~V~I~tp~ 98 (361)
T 3u3x_A 23 MMDELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHE-KDDAL-AAEF-SAVYADARRIATAEEILED-ENIGLIVSAAVS 98 (361)
T ss_dssp ---CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEEC-SCHHH-HHHH-HHHSSSCCEESCHHHHHTC-TTCCEEEECCCH
T ss_pred hccCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEc-CCHHH-HHHH-HHHcCCCcccCCHHHHhcC-CCCCEEEEeCCh
Confidence 44566899996 33332 45555557888876665 52211 0111 1122246899999999875 369999999999
Q ss_pred hhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCee-EcCC
Q 007482 83 RSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV-IGPA 131 (602)
Q Consensus 83 ~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~ri-iGPN 131 (602)
....+.+++++. +|.. +++= .-....++.++|++.|+++|+.+ +|-|
T Consensus 99 ~~H~~~~~~al~-aGkh-Vl~EKPla~~~~ea~~l~~~a~~~g~~l~v~~~ 147 (361)
T 3u3x_A 99 SERAELAIRAMQ-HGKD-VLVDKPGMTSFDQLAKLRRVQAETGRIFSILYS 147 (361)
T ss_dssp HHHHHHHHHHHH-TTCE-EEEESCSCSSHHHHHHHHHHHHTTCCCEEEECH
T ss_pred HHHHHHHHHHHH-CCCe-EEEeCCCCCCHHHHHHHHHHHHHcCCEEEEech
Confidence 875566666555 7854 4442 12445557889999999999864 5544
No 58
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=96.61 E-value=0.003 Score=65.21 Aligned_cols=114 Identities=10% Similarity=-0.045 Sum_probs=73.7
Q ss_pred CcEEEEe-eCCcH-HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhH
Q 007482 10 TTQALFY-NYKQL-PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAA 86 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~ 86 (602)
.+++||| |..|+ +++.+.+. ++++++..+ +... +.+.+ .+-.|++ |.+.+|++.. +++|+++|++|.....
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~--~~~~~~~-~~~~~~~l~~-~~~D~V~i~tp~~~h~ 77 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVAD-AFPA-AAEAI--AGAYGCE-VRTIDAIEAA-ADIDAVVICTPTDTHA 77 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC-SSHH-HHHHH--HHHTTCE-ECCHHHHHHC-TTCCEEEECSCGGGHH
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEEC-CCHH-HHHHH--HHHhCCC-cCCHHHHhcC-CCCCEEEEeCCchhHH
Confidence 4688886 22233 77777774 777775554 4221 11111 1234678 9999998864 3699999999998755
Q ss_pred HHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCee-EcCC
Q 007482 87 ASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV-IGPA 131 (602)
Q Consensus 87 ~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~ri-iGPN 131 (602)
+.+.+++. +|. .+++- .-.....+.++|.+.|+++|+.+ +|.|
T Consensus 78 ~~~~~al~-~gk-~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~ 122 (331)
T 4hkt_A 78 DLIERFAR-AGK-AIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFN 122 (331)
T ss_dssp HHHHHHHH-TTC-EEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHH-cCC-cEEEecCCCCCHHHHHHHHHHHHHcCCeEEEccc
Confidence 55555554 774 45442 22566667889999999999864 4444
No 59
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.60 E-value=0.0024 Score=67.70 Aligned_cols=117 Identities=15% Similarity=0.149 Sum_probs=76.1
Q ss_pred CCcEEEEe-e-CCcH-HHHHHHh-cCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 9 KTTQALFY-N-YKQL-PIQRMLD-FDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 9 p~s~avv~-g-~~~~-~~~~~~~-~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
|..++||| | ..++ +++.+.. .++++|+.++ +... +.+.+ .+-.|+++|.|++|++... ++|+++|++|...
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~--a~~~g~~~~~~~~ell~~~-~vD~V~i~tp~~~ 76 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACD-PNED-VRERF--GKEYGIPVFATLAEMMQHV-QMDAVYIASPHQF 76 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEEC-SCHH-HHHHH--HHHHTCCEESSHHHHHHHS-CCSEEEECSCGGG
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEe-CCHH-HHHHH--HHHcCCCeECCHHHHHcCC-CCCEEEEcCCcHH
Confidence 45788885 2 2222 7777776 4677776665 5321 11111 1234789999999998753 6999999999987
Q ss_pred hHHHHHHHhhCCCCcEEEEec-CCCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 85 AAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 85 ~~~~~~e~~~~~gv~~~viis-~Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
..+.+++++. +|. .+++=- -.....+.++|.+.|+++|+. .+|.|.
T Consensus 77 H~~~~~~al~-aGk-~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~ 124 (387)
T 3moi_A 77 HCEHVVQASE-QGL-HIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSR 124 (387)
T ss_dssp HHHHHHHHHH-TTC-EEEECSCCCSCHHHHHHHHHHHHHHTCCEEECCCG
T ss_pred HHHHHHHHHH-CCC-ceeeeCCccCCHHHHHHHHHHHHHhCCeEEEEecc
Confidence 6665565555 784 454421 144556788999999999986 455543
No 60
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=96.60 E-value=0.0023 Score=66.48 Aligned_cols=116 Identities=13% Similarity=-0.008 Sum_probs=74.9
Q ss_pred CCcEEEEe-eCCc-HHHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 9 KTTQALFY-NYKQ-LPIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 9 p~s~avv~-g~~~-~~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
+.+++||| |..| .+++.+.+. ++++++..+ +.... .+.+ .+-.|.++|.+++|++.. +++|+++|++|....
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d-~~~~~-~~~~--a~~~g~~~~~~~~~~l~~-~~~D~V~i~tp~~~h 78 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIAD-PFIEG-AQRL--AEANGAEAVASPDEVFAR-DDIDGIVIGSPTSTH 78 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC-SSHHH-HHHH--HHTTTCEEESSHHHHTTC-SCCCEEEECSCGGGH
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEEC-CCHHH-HHHH--HHHcCCceeCCHHHHhcC-CCCCEEEEeCCchhh
Confidence 45788886 2223 377777775 677765554 42211 1111 122467899999998764 369999999999876
Q ss_pred HHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCe-eEcCC
Q 007482 86 AASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPA 131 (602)
Q Consensus 86 ~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~r-iiGPN 131 (602)
.+.+.+++ ++|.+ +++- .-.....+.++|.+.|+++|+. .+|.|
T Consensus 79 ~~~~~~al-~~gk~-v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~ 124 (344)
T 3euw_A 79 VDLITRAV-ERGIP-ALCEKPIDLDIEMVRACKEKIGDGASKVMLGFN 124 (344)
T ss_dssp HHHHHHHH-HTTCC-EEECSCSCSCHHHHHHHHHHHGGGGGGEEECCG
T ss_pred HHHHHHHH-HcCCc-EEEECCCCCCHHHHHHHHHHHHhcCCeEEecch
Confidence 55555555 47855 4442 2256666788999999999975 44544
No 61
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=96.59 E-value=0.005 Score=63.69 Aligned_cols=118 Identities=13% Similarity=0.060 Sum_probs=75.9
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHh-cCCeEEEEEeCCCCCCccccccCceeecc-cccCCHHHHhhcCCCccEEEEecCCh
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLD-FDFLCVAGIINPGAEGFQKLFFGQEEIAI-PVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~-~g~~~V~gv~~p~~~~~~~~~~g~~v~G~-~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
++.+++||| |..++ +++.+.+ .++++++..+ +... +.+.+ .+-.|+ ++|.+.++++.. +++|+++|++|..
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~--~~~~~~~~~~~~~~~ll~~-~~~D~V~i~tp~~ 78 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIAS-RRLE-NAQKM--AKELAIPVAYGSYEELCKD-ETIDIIYIPTYNQ 78 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBC-SSSH-HHHHH--HHHTTCCCCBSSHHHHHHC-TTCSEEEECCCGG
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEe-CCHH-HHHHH--HHHcCCCceeCCHHHHhcC-CCCCEEEEcCCCH
Confidence 345788886 33343 7777777 4677665544 4221 11111 122466 589999998864 3699999999998
Q ss_pred hhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 84 SAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 84 ~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
...+.+.+++. +|.+ +++- .-.....+.++|.+.|+++|+. .+|.|.
T Consensus 79 ~h~~~~~~al~-~gk~-vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~ 127 (330)
T 3e9m_A 79 GHYSAAKLALS-QGKP-VLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKS 127 (330)
T ss_dssp GHHHHHHHHHH-TTCC-EEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSG
T ss_pred HHHHHHHHHHH-CCCe-EEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhh
Confidence 75555555554 7855 4432 2255566788999999999986 455554
No 62
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.56 E-value=0.0019 Score=68.36 Aligned_cols=111 Identities=14% Similarity=0.111 Sum_probs=69.8
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhc--CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDF--DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~--g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
|-.++||| |+ |+ .++.+.+. ++++|+-+. +... +.+.+ .+-.|+|+|.|++++++ ++|+++|++|...
T Consensus 7 ~~rv~VvG~G~-g~~h~~a~~~~~~~~elvav~~-~~~~-~a~~~--a~~~gv~~~~~~~~l~~---~~D~v~i~~p~~~ 78 (372)
T 4gmf_A 7 KQRVLIVGAKF-GEMYLNAFMQPPEGLELVGLLA-QGSA-RSREL--AHAFGIPLYTSPEQITG---MPDIACIVVRSTV 78 (372)
T ss_dssp CEEEEEECSTT-THHHHHTTSSCCTTEEEEEEEC-CSSH-HHHHH--HHHTTCCEESSGGGCCS---CCSEEEECCC--C
T ss_pred CCEEEEEehHH-HHHHHHHHHhCCCCeEEEEEEC-CCHH-HHHHH--HHHhCCCEECCHHHHhc---CCCEEEEECCCcc
Confidence 44677776 45 55 67766653 688876555 5322 11122 23458999999999865 5899999998754
Q ss_pred h----HHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe-eEcC
Q 007482 85 A----AASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV-VIGP 130 (602)
Q Consensus 85 ~----~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r-iiGP 130 (602)
- .+-+++++. +|.. +++==- +...+.++|+++|+++|+. .+|-
T Consensus 79 h~~~~~~~a~~al~-aGkh-Vl~EKP-l~~~ea~~l~~~A~~~g~~~~v~~ 126 (372)
T 4gmf_A 79 AGGAGTQLARHFLA-RGVH-VIQEHP-LHPDDISSLQTLAQEQGCCYWINT 126 (372)
T ss_dssp TTSHHHHHHHHHHH-TTCE-EEEESC-CCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred cchhHHHHHHHHHH-cCCc-EEEecC-CCHHHHHHHHHHHHHcCCEEEEcC
Confidence 2 344455454 7865 443211 3445778999999999987 4443
No 63
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.47 E-value=0.0053 Score=64.35 Aligned_cols=118 Identities=18% Similarity=0.104 Sum_probs=74.7
Q ss_pred CCCcEEEEe-eCCcH--HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 8 SKTTQALFY-NYKQL--PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 8 ~p~s~avv~-g~~~~--~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
++..++||| |..++ +++.+.+. ++++++.++ +... +.+.+ .++..+.++|.+++|++... ++|+++|++|..
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~-a~~~~~~~~~~~~~~ll~~~-~vD~V~i~tp~~ 79 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACD-SDLE-RARRV-HRFISDIPVLDNVPAMLNQV-PLDAVVMAGPPQ 79 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEEC-SSHH-HHGGG-GGTSCSCCEESSHHHHHHHS-CCSEEEECSCHH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEc-CCHH-HHHHH-HHhcCCCcccCCHHHHhcCC-CCCEEEEcCCcH
Confidence 356788886 32232 56777764 677765555 4221 11111 12334678999999998753 699999999998
Q ss_pred hhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCe-eEcCC
Q 007482 84 SAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPA 131 (602)
Q Consensus 84 ~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~r-iiGPN 131 (602)
...+.+++++. +|.. +++= .-.....+.++|++.|+++|+. .+|-|
T Consensus 80 ~H~~~~~~al~-aGkh-Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~ 127 (359)
T 3m2t_A 80 LHFEMGLLAMS-KGVN-VFVEKPPCATLEELETLIDAARRSDVVSGVGMN 127 (359)
T ss_dssp HHHHHHHHHHH-TTCE-EEECSCSCSSHHHHHHHHHHHHHHTCCEEECCH
T ss_pred HHHHHHHHHHH-CCCe-EEEECCCcCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 75555555554 7855 3331 1244555778999999999975 44444
No 64
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.47 E-value=0.0046 Score=64.29 Aligned_cols=118 Identities=11% Similarity=0.032 Sum_probs=74.1
Q ss_pred CCCcEEEEe-e-CCcH-HHHHHHhc--CCeEEEEEeCCCCCCccccccCceeecc-cccCCHHHHhhcCCCccEEEEecC
Q 007482 8 SKTTQALFY-N-YKQL-PIQRMLDF--DFLCVAGIINPGAEGFQKLFFGQEEIAI-PVHSTVEAACAAHPMADVFINFSS 81 (602)
Q Consensus 8 ~p~s~avv~-g-~~~~-~~~~~~~~--g~~~V~gv~~p~~~~~~~~~~g~~v~G~-~~y~sv~~i~~~~p~vDlavi~vp 81 (602)
+|-.++||| | ..++ +++.+... ++++|+.++ +... +.+.+ .+-.|. ++|.+++|++.. +++|+++|++|
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d-~~~~-~~~~~--a~~~~~~~~~~~~~~ll~~-~~vD~V~i~tp 91 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTS-RTRS-HAEEF--AKMVGNPAVFDSYEELLES-GLVDAVDLTLP 91 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEEC-SSHH-HHHHH--HHHHSSCEEESCHHHHHHS-SCCSEEEECCC
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEc-CCHH-HHHHH--HHHhCCCcccCCHHHHhcC-CCCCEEEEeCC
Confidence 345788885 3 2233 77777765 567765555 4221 11111 122355 789999998865 36999999999
Q ss_pred ChhhHHHHHHHhhCCCCcEEEEec-CCCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 82 FRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 82 ~~~~~~~~~e~~~~~gv~~~viis-~Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
.....+.+++++. +|. .+++=- -.....+.++|++.|+++|+. .+|-|.
T Consensus 92 ~~~H~~~~~~al~-aGk-hVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~ 142 (340)
T 1zh8_A 92 VELNLPFIEKALR-KGV-HVICEKPISTDVETGKKVVELSEKSEKTVYIAENF 142 (340)
T ss_dssp GGGHHHHHHHHHH-TTC-EEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGG
T ss_pred chHHHHHHHHHHH-CCC-cEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEecc
Confidence 9765565665555 785 455421 134455778999999999986 445443
No 65
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=96.45 E-value=0.0088 Score=62.70 Aligned_cols=123 Identities=20% Similarity=0.126 Sum_probs=80.0
Q ss_pred CccCCCCCCCcEEEEee--C----CcHHHHHHHhc--CCeEEEEEeCCC-CCCccccccCceeecccccCCHHHHhhcCC
Q 007482 1 MATGQLFSKTTQALFYN--Y----KQLPIQRMLDF--DFLCVAGIINPG-AEGFQKLFFGQEEIAIPVHSTVEAACAAHP 71 (602)
Q Consensus 1 ~~~~~l~~p~s~avv~g--~----~~~~~~~~~~~--g~~~V~gv~~p~-~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p 71 (602)
|++-.++.+.+.++|.+ . .++....++++ +|++|+.+ +. .+.+.+++.+..-.|+|++.|+++++..
T Consensus 13 ~~~~~~~~~~~~~vi~~~g~~g~~~aKta~gllr~~~~~~iVgvi--~~~~Gkd~ge~~~g~~~gipv~~d~~~al~~-- 88 (350)
T 2g0t_A 13 MDLWKLYQPGTPAAIVAWGQLGTAHAKTTYGLLRHSRLFKPVCVV--AEHEGKMASDFVKPVRYDVPVVSSVEKAKEM-- 88 (350)
T ss_dssp CCHHHHSCTTEEEEEECTTTTTSGGGHHHHHHHHHCSSEEEEEEE--SSCTTCBGGGTCC-CCSCCBEESSHHHHHHT--
T ss_pred hhHHhhhCcCCCEEEEeCCCCChHHHHHHHHHHhhCCCCeEEEEe--ecCCCCcHHHhhCCCCCCceeeCCHHHHHhc--
Confidence 45555677788777774 2 22355567777 58888554 63 4447788874345899999999999864
Q ss_pred CccEEEEecC-Ch-----hhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcC
Q 007482 72 MADVFINFSS-FR-----SAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGP 130 (602)
Q Consensus 72 ~vDlavi~vp-~~-----~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGP 130 (602)
.+|.+|+.+. .. ...+.+.+++ ++|..- |- +-.....+..+|.++|+++|+.+++=
T Consensus 89 ~~d~lvig~a~~gg~l~~~~~~~I~~Al-~~G~nV-vs-glh~~l~~~pel~~~A~~~Gv~i~dv 150 (350)
T 2g0t_A 89 GAEVLIIGVSNPGGYLEEQIATLVKKAL-SLGMDV-IS-GLHFKISQQTEFLKIAHENGTRIIDI 150 (350)
T ss_dssp TCCEEEECCCSCCHHHHHHHHHHHHHHH-HTTCEE-EE-CCCC--CCHHHHHHHHHHHTCCEEES
T ss_pred CCCEEEEEecCCCCCCCHHHHHHHHHHH-HcCCcE-Ee-CChhhhhCCHHHHHHHHHCCCEEEEe
Confidence 3799999862 22 2224455555 478762 22 22333336677999999999998874
No 66
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.45 E-value=0.005 Score=64.48 Aligned_cols=117 Identities=18% Similarity=0.056 Sum_probs=75.8
Q ss_pred CCCcEEEEe-eCCc-HHHHHHH-h-cCCeEEEEEeCCCCCCccccccCceeec--ccccCCHHHHhhcCCCccEEEEecC
Q 007482 8 SKTTQALFY-NYKQ-LPIQRML-D-FDFLCVAGIINPGAEGFQKLFFGQEEIA--IPVHSTVEAACAAHPMADVFINFSS 81 (602)
Q Consensus 8 ~p~s~avv~-g~~~-~~~~~~~-~-~g~~~V~gv~~p~~~~~~~~~~g~~v~G--~~~y~sv~~i~~~~p~vDlavi~vp 81 (602)
.+.+++||| |..| .+++.+. . .++++++.++ +.... .+.+ .+-.| .+.|.+++|++.. +++|+++|++|
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d-~~~~~-~~~~--a~~~g~~~~~~~~~~~ll~~-~~~D~V~i~tp 96 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCD-IVAGR-AQAA--LDKYAIEAKDYNDYHDLIND-KDVEVVIITAS 96 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEEC-SSTTH-HHHH--HHHHTCCCEEESSHHHHHHC-TTCCEEEECSC
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEe-CCHHH-HHHH--HHHhCCCCeeeCCHHHHhcC-CCCCEEEEcCC
Confidence 345788886 3223 3777777 4 4777776555 43221 1111 12234 6899999998875 36999999999
Q ss_pred ChhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCee--EcCC
Q 007482 82 FRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV--IGPA 131 (602)
Q Consensus 82 ~~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~ri--iGPN 131 (602)
.....+.+++++. +|. .+++= .-.....+.++|.+.|+++|+++ +|-|
T Consensus 97 ~~~h~~~~~~al~-aGk-~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~ 147 (357)
T 3ec7_A 97 NEAHADVAVAALN-ANK-YVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFM 147 (357)
T ss_dssp GGGHHHHHHHHHH-TTC-EEEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECG
T ss_pred cHHHHHHHHHHHH-CCC-CEEeecCccCCHHHHHHHHHHHHHhCCeEEEEeec
Confidence 9876555555554 784 45542 22455567889999999999876 4544
No 67
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=96.43 E-value=0.0058 Score=64.17 Aligned_cols=114 Identities=17% Similarity=0.113 Sum_probs=74.3
Q ss_pred CCcEEEEe-eCCcH--HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 9 KTTQALFY-NYKQL--PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 9 p~s~avv~-g~~~~--~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.+++||| |..++ +++.+... ++++++.++ +.... .+ .+..+.++|.+++|++.. +++|+++|++|...
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d-~~~~~-~~----~~~~~~~~~~~~~~ll~~-~~~D~V~i~tp~~~ 79 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVAS-RDEEK-VK----RDLPDVTVIASPEAAVQH-PDVDLVVIASPNAT 79 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEEC-SCHHH-HH----HHCTTSEEESCHHHHHTC-TTCSEEEECSCGGG
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEc-CCHHH-HH----hhCCCCcEECCHHHHhcC-CCCCEEEEeCChHH
Confidence 45788886 33333 45556554 677775555 42211 11 233478899999998864 36999999999987
Q ss_pred hHHHHHHHhhCCCCcEEEEecC-CCCHHHHHHHHHHHHhCCCee-EcCC
Q 007482 85 AAASSMAALKQPTIRVVAIIAE-GVPEADTKQLIAYARSNNKVV-IGPA 131 (602)
Q Consensus 85 ~~~~~~e~~~~~gv~~~viis~-Gf~E~~~~~l~~~a~~~g~ri-iGPN 131 (602)
..+.+++++. +|. .+++=-- .....+.++|++.|+++|+.+ +|.|
T Consensus 80 H~~~~~~al~-aGk-~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~ 126 (364)
T 3e82_A 80 HAPLARLALN-AGK-HVVVDKPFTLDMQEARELIALAEEKQRLLSVFHN 126 (364)
T ss_dssp HHHHHHHHHH-TTC-EEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHHHH-CCC-cEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEee
Confidence 6666666555 784 4444211 455557889999999999874 4544
No 68
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.40 E-value=0.0077 Score=62.95 Aligned_cols=116 Identities=20% Similarity=0.074 Sum_probs=73.3
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHh--------cCCeEEEEEeCCCCCCccccccCceeecc-cccCCHHHHhhcCCCccEE
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLD--------FDFLCVAGIINPGAEGFQKLFFGQEEIAI-PVHSTVEAACAAHPMADVF 76 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~--------~g~~~V~gv~~p~~~~~~~~~~g~~v~G~-~~y~sv~~i~~~~p~vDla 76 (602)
+|=.++||| |..++ +++.+.. -+.++|+.++ +.... .+.+ .+-.|+ ++|.+.+|++.. +++|++
T Consensus 24 kkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d-~~~~~-a~~~--a~~~g~~~~y~d~~ell~~-~~iDaV 98 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAE-ANAGL-AEAR--AGEFGFEKATADWRALIAD-PEVDVV 98 (393)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEEC-C--TT-HHHH--HHHHTCSEEESCHHHHHHC-TTCCEE
T ss_pred CCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEEC-CCHHH-HHHH--HHHhCCCeecCCHHHHhcC-CCCcEE
Confidence 344788886 33333 4443332 2567776665 53321 1111 123455 489999999875 479999
Q ss_pred EEecCChhhHHHHHHHhhCCCCcEEEEecC---CCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 77 INFSSFRSAAASSMAALKQPTIRVVAIIAE---GVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 77 vi~vp~~~~~~~~~e~~~~~gv~~~viis~---Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
+|++|...-.+.+++++. +|.. + +.+ .....+.++|++.|+++|+. .+|-|.
T Consensus 99 ~IatP~~~H~~~a~~al~-aGkh-V--l~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~ 154 (393)
T 4fb5_A 99 SVTTPNQFHAEMAIAALE-AGKH-V--WCEKPMAPAYADAERMLATAERSGKVAALGYNY 154 (393)
T ss_dssp EECSCGGGHHHHHHHHHH-TTCE-E--EECSCSCSSHHHHHHHHHHHHHSSSCEEECCGG
T ss_pred EECCChHHHHHHHHHHHh-cCCe-E--EEccCCcccHHHHHHhhhhHHhcCCcccccccc
Confidence 999999876677777666 7765 3 334 44445778999999999975 455543
No 69
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=96.39 E-value=0.0049 Score=63.77 Aligned_cols=110 Identities=7% Similarity=-0.093 Sum_probs=69.1
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
++.+++|+| |..|+ +++.+.+. ++++|+.++ +....+ + + .|+++|.+++++.+ ++|++++++|+..
T Consensus 2 ~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d-~~~~~~---~-~---~gv~~~~d~~~ll~---~~DvViiatp~~~ 70 (320)
T 1f06_A 2 TNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFS-RRATLD---T-K---TPVFDVADVDKHAD---DVDVLFLCMGSAT 70 (320)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEE-SSSCCS---S-S---SCEEEGGGGGGTTT---TCSEEEECSCTTT
T ss_pred CCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEc-CCHHHh---h-c---CCCceeCCHHHHhc---CCCEEEEcCCcHH
Confidence 355788885 22233 66666664 677776666 532211 1 1 46788999988762 5899999999875
Q ss_pred hHHHHHHHhhCCCCcEEEEec-CCCCHHHH-HHHHHHHHhCCC-eeEcC
Q 007482 85 AAASSMAALKQPTIRVVAIIA-EGVPEADT-KQLIAYARSNNK-VVIGP 130 (602)
Q Consensus 85 ~~~~~~e~~~~~gv~~~viis-~Gf~E~~~-~~l~~~a~~~g~-riiGP 130 (602)
..+.+.+++ ++|.+ +++-+ .+...... ++|.+.|++.+. .+++.
T Consensus 71 h~~~~~~al-~aG~~-Vv~ekp~~~~~~~~~~~l~~~a~~~~~v~v~~~ 117 (320)
T 1f06_A 71 DIPEQAPKF-AQFAC-TVDTYDNHRDIPRHRQVMNEAATAAGNVALVST 117 (320)
T ss_dssp HHHHHHHHH-TTTSE-EECCCCCGGGHHHHHHHHHHHHHHHTCEEECSC
T ss_pred HHHHHHHHH-HCCCE-EEECCCCcCCHHHHHHHHHHHHHhCCCEEEEec
Confidence 555555555 47865 33333 34544444 889999998774 44444
No 70
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=96.37 E-value=0.011 Score=60.55 Aligned_cols=111 Identities=15% Similarity=0.076 Sum_probs=70.5
Q ss_pred CCCcEEEEe-eCCcH--HHHHHHh-cCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 8 SKTTQALFY-NYKQL--PIQRMLD-FDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 8 ~p~s~avv~-g~~~~--~~~~~~~-~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
++.+++||| |..++ +++.+.+ -++++++.++ +.... .+.+ .+-.|+++|.+.+++ .. ++|+++|++|..
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d-~~~~~-~~~~--~~~~g~~~~~~~~~l-~~--~~D~V~i~tp~~ 76 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWS-PTRAK-ALPI--CESWRIPYADSLSSL-AA--SCDAVFVHSSTA 76 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEEC-SSCTT-HHHH--HHHHTCCBCSSHHHH-HT--TCSEEEECSCTT
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEEC-CCHHH-HHHH--HHHcCCCccCcHHHh-hc--CCCEEEEeCCch
Confidence 456788886 33333 5566655 4677765555 42221 1111 123467899999886 32 589999999987
Q ss_pred hhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCee
Q 007482 84 SAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV 127 (602)
Q Consensus 84 ~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~ri 127 (602)
...+.+.+++. +|.. +++- .......+.++|.+.|+++|+.+
T Consensus 77 ~h~~~~~~al~-~G~~-v~~eKP~~~~~~~~~~l~~~a~~~g~~~ 119 (319)
T 1tlt_A 77 SHFDVVSTLLN-AGVH-VCVDKPLAENLRDAERLVELAARKKLTL 119 (319)
T ss_dssp HHHHHHHHHHH-TTCE-EEEESSSCSSHHHHHHHHHHHHHTTCCE
T ss_pred hHHHHHHHHHH-cCCe-EEEeCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 65555555554 7754 4443 34556667889999999999875
No 71
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.30 E-value=0.0056 Score=63.57 Aligned_cols=116 Identities=12% Similarity=0.055 Sum_probs=74.3
Q ss_pred CcEEEEe-eCCcH-HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeeccc-ccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 10 TTQALFY-NYKQL-PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIP-VHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~-~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
.+++||| |..|+ +++.+.+. ++++++..+ +.... .+.+ .+-.|++ +|.+.+|++.. +++|+++|++|....
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d-~~~~~-~~~~--~~~~~~~~~~~~~~~ll~~-~~~D~V~i~tp~~~h 77 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISD-VREDR-LREM--KEKLGVEKAYKDPHELIED-PNVDAVLVCSSTNTH 77 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEEC-SCHHH-HHHH--HHHHTCSEEESSHHHHHHC-TTCCEEEECSCGGGH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEEC-CCHHH-HHHH--HHHhCCCceeCCHHHHhcC-CCCCEEEEcCCCcch
Confidence 4688886 32233 77777764 677765554 42211 1111 1234554 89999998874 369999999999875
Q ss_pred HHHHHHHhhCCCCcEEEEec-CCCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 86 AASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 86 ~~~~~e~~~~~gv~~~viis-~Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
.+.+.+++. +|. .+++-- -.....+.++|.+.|+++|+. .+|-|.
T Consensus 78 ~~~~~~al~-~gk-~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~ 124 (344)
T 3ezy_A 78 SELVIACAK-AKK-HVFCEKPLSLNLADVDRMIEETKKADVILFTGFNR 124 (344)
T ss_dssp HHHHHHHHH-TTC-EEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGG
T ss_pred HHHHHHHHh-cCC-eEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecc
Confidence 555555554 784 455432 256666788999999999985 455443
No 72
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=96.28 E-value=0.0057 Score=62.44 Aligned_cols=112 Identities=12% Similarity=0.071 Sum_probs=72.3
Q ss_pred CCCCcEEEEe-eCCcH--HHHHHHh-cCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCC
Q 007482 7 FSKTTQALFY-NYKQL--PIQRMLD-FDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~--~~~~~~~-~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~ 82 (602)
..+.+++||| |..++ +++.+.+ .++++++.++ +... +.+.+ .+-.|++.|.+++|++. ++|+++|++|.
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~--a~~~~~~~~~~~~~ll~---~~D~V~i~tp~ 76 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFT-PNKV-KREKI--CSDYRIMPFDSIESLAK---KCDCIFLHSST 76 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEEC-SCHH-HHHHH--HHHHTCCBCSCHHHHHT---TCSEEEECCCG
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEEC-CCHH-HHHHH--HHHcCCCCcCCHHHHHh---cCCEEEEeCCc
Confidence 3567889986 32233 4555665 5677775555 4221 11111 12357788999999886 48999999999
Q ss_pred hhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCee
Q 007482 83 RSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV 127 (602)
Q Consensus 83 ~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~ri 127 (602)
....+.+.+++ ++|.+ +++= .-.....+.++|.+.|+++|+.+
T Consensus 77 ~~h~~~~~~al-~~gk~-vl~EKP~~~~~~~~~~l~~~a~~~g~~~ 120 (308)
T 3uuw_A 77 ETHYEIIKILL-NLGVH-VYVDKPLASTVSQGEELIELSTKKNLNL 120 (308)
T ss_dssp GGHHHHHHHHH-HTTCE-EEECSSSSSSHHHHHHHHHHHHHHTCCE
T ss_pred HhHHHHHHHHH-HCCCc-EEEcCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 87555555554 47865 3331 33556667889999999999764
No 73
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.26 E-value=0.0065 Score=65.54 Aligned_cols=115 Identities=12% Similarity=0.090 Sum_probs=75.5
Q ss_pred CCcEEEEee-----CCcH-HHHHHHhc--CCeEEEEEeCCCCCCccccccCceeeccc---ccCCHHHHhhcCCCccEEE
Q 007482 9 KTTQALFYN-----YKQL-PIQRMLDF--DFLCVAGIINPGAEGFQKLFFGQEEIAIP---VHSTVEAACAAHPMADVFI 77 (602)
Q Consensus 9 p~s~avv~g-----~~~~-~~~~~~~~--g~~~V~gv~~p~~~~~~~~~~g~~v~G~~---~y~sv~~i~~~~p~vDlav 77 (602)
+..++|||. ..++ +++.+.+. ++++|+.++ +.... .+.+ .+..|++ +|.+++|++.. +++|+++
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d-~~~~~-~~~~--a~~~g~~~~~~~~~~~~ll~~-~~vD~V~ 94 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYS-PKIET-SIAT--IQRLKLSNATAFPTLESFASS-STIDMIV 94 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEEC-SSHHH-HHHH--HHHTTCTTCEEESSHHHHHHC-SSCSEEE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEe-CCHHH-HHHH--HHHcCCCcceeeCCHHHHhcC-CCCCEEE
Confidence 456888852 2233 88888876 677776655 42210 0111 1223555 89999998864 3699999
Q ss_pred EecCChhhHHHHHHHhhCCCC-----cEEEEe-cCCCCHHHHHHHHHHHHhCCCe-eEc
Q 007482 78 NFSSFRSAAASSMAALKQPTI-----RVVAII-AEGVPEADTKQLIAYARSNNKV-VIG 129 (602)
Q Consensus 78 i~vp~~~~~~~~~e~~~~~gv-----~~~vii-s~Gf~E~~~~~l~~~a~~~g~r-iiG 129 (602)
|++|.....+.+++++. +|. |.+++= .-.....+.++|++.|+++|+. .+|
T Consensus 95 i~tp~~~H~~~~~~al~-aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~ 152 (438)
T 3btv_A 95 IAIQVASHYEVVMPLLE-FSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTIIS 152 (438)
T ss_dssp ECSCHHHHHHHHHHHHH-HGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEEEEE
T ss_pred EeCCcHHHHHHHHHHHH-CCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 99999876666666665 673 667664 2345555788999999999986 444
No 74
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=96.25 E-value=0.0072 Score=62.79 Aligned_cols=116 Identities=15% Similarity=0.033 Sum_probs=73.2
Q ss_pred CCcEEEEe-eCCcH--HHHHHHh--cCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 9 KTTQALFY-NYKQL--PIQRMLD--FDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 9 p~s~avv~-g~~~~--~~~~~~~--~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
+.+++||| |..++ ++.+++. -++++++.++ +.... .+. ..+..|.++|.|++|++.. +++|+++|++|..
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d-~~~~~-~~~--~~~~~~~~~~~~~~~ll~~-~~~D~V~i~tp~~ 76 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFR-RHAKP-EEQ--APIYSHIHFTSDLDEVLND-PDVKLVVVCTHAD 76 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEEC-SSCCG-GGG--SGGGTTCEEESCTHHHHTC-TTEEEEEECSCGG
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEc-CCHhH-HHH--HHhcCCCceECCHHHHhcC-CCCCEEEEcCChH
Confidence 34688886 33333 4442433 4677776665 52221 111 1234578999999998865 3699999999998
Q ss_pred hhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCee-EcCC
Q 007482 84 SAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV-IGPA 131 (602)
Q Consensus 84 ~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~ri-iGPN 131 (602)
...+.+.+++. +|. .+++- .-.....+.++|.+.|+++|+.+ +|-|
T Consensus 77 ~h~~~~~~al~-aGk-~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~ 124 (345)
T 3f4l_A 77 SHFEYAKRALE-AGK-NVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQN 124 (345)
T ss_dssp GHHHHHHHHHH-TTC-EEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCG
T ss_pred HHHHHHHHHHH-cCC-cEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEec
Confidence 76666665555 784 44442 11445557889999999999864 4444
No 75
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.20 E-value=0.0054 Score=63.68 Aligned_cols=115 Identities=13% Similarity=-0.004 Sum_probs=74.0
Q ss_pred CcEEEEe-eCCc-HHHHHHH-h-cCCeEEEEEeCCCCCCccccccCceeec--ccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 10 TTQALFY-NYKQ-LPIQRML-D-FDFLCVAGIINPGAEGFQKLFFGQEEIA--IPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 10 ~s~avv~-g~~~-~~~~~~~-~-~g~~~V~gv~~p~~~~~~~~~~g~~v~G--~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
.+++||| |..| .+++.+. . -++++++.++ +.... .+.+ .+-.| .+.|.+.+|++.. +++|+++|++|..
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d-~~~~~-~~~~--~~~~g~~~~~~~~~~~ll~~-~~~D~V~i~tp~~ 77 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTD-VNQEA-AQKV--VEQYQLNATVYPNDDSLLAD-ENVDAVLVTSWGP 77 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEEC-SSHHH-HHHH--HHHTTCCCEEESSHHHHHHC-TTCCEEEECSCGG
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEc-CCHHH-HHHH--HHHhCCCCeeeCCHHHHhcC-CCCCEEEECCCch
Confidence 4688886 3223 3778887 4 5677775555 42211 1111 12235 6789999998875 3699999999998
Q ss_pred hhHHHHHHHhhCCCCcEEEEec-CCCCHHHHHHHHHHHHhCCCee--EcCC
Q 007482 84 SAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKVV--IGPA 131 (602)
Q Consensus 84 ~~~~~~~e~~~~~gv~~~viis-~Gf~E~~~~~l~~~a~~~g~ri--iGPN 131 (602)
...+.+.+++ ++|. .+++=- -.....+.++|.+.|+++|+++ +|-|
T Consensus 78 ~h~~~~~~al-~~Gk-~vl~EKP~a~~~~e~~~l~~~a~~~g~~~~~v~~~ 126 (344)
T 3mz0_A 78 AHESSVLKAI-KAQK-YVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFM 126 (344)
T ss_dssp GHHHHHHHHH-HTTC-EEEECSCSCSSHHHHHHHHHHHHHHSSCCEEECCG
T ss_pred hHHHHHHHHH-HCCC-cEEEcCCCCCCHHHHHHHHHHHHHHCCEEEEEecc
Confidence 7555555555 4784 454421 2455567889999999999876 4544
No 76
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.18 E-value=0.0072 Score=63.22 Aligned_cols=115 Identities=9% Similarity=0.015 Sum_probs=74.6
Q ss_pred CCCcEEEEe-eCCcH--HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 8 SKTTQALFY-NYKQL--PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 8 ~p~s~avv~-g~~~~--~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
++..++||| |..++ +++.+... ++++++..+ +.... ...+..+.++|.+++|++.. +++|+++|++|..
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d-~~~~~-----~~~~~~~~~~~~~~~~ll~~-~~vD~V~i~tp~~ 76 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMT-SRTEE-----VKRDFPDAEVVHELEEITND-PAIELVIVTTPSG 76 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEEC-SCHHH-----HHHHCTTSEEESSTHHHHTC-TTCCEEEECSCTT
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEc-CCHHH-----HHhhCCCCceECCHHHHhcC-CCCCEEEEcCCcH
Confidence 355788886 22233 45555554 677765554 42211 11233478999999998865 3699999999998
Q ss_pred hhHHHHHHHhhCCCCcEEEEec-CCCCHHHHHHHHHHHHhCCCe-eEcCC
Q 007482 84 SAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPA 131 (602)
Q Consensus 84 ~~~~~~~e~~~~~gv~~~viis-~Gf~E~~~~~l~~~a~~~g~r-iiGPN 131 (602)
...+.+++++. +|. .+++=- -.....+.++|++.|+++|+. .+|-|
T Consensus 77 ~H~~~~~~al~-aGk-hVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~ 124 (358)
T 3gdo_A 77 LHYEHTMACIQ-AGK-HVVMEKPMTATAEEGETLKRAADEKGVLLSVYHN 124 (358)
T ss_dssp THHHHHHHHHH-TTC-EEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECG
T ss_pred HHHHHHHHHHH-cCC-eEEEecCCcCCHHHHHHHHHHHHHcCCeEEEeee
Confidence 76666666655 784 455421 144555778999999999986 44554
No 77
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.15 E-value=0.0096 Score=61.20 Aligned_cols=115 Identities=16% Similarity=0.062 Sum_probs=71.9
Q ss_pred cEEEEe-eCCcH-H-HHHHHhcCCeEEEEEeCCCCCCccccccCceeeccc-ccCCHHHHhhcCCCccEEEEecCChhhH
Q 007482 11 TQALFY-NYKQL-P-IQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIP-VHSTVEAACAAHPMADVFINFSSFRSAA 86 (602)
Q Consensus 11 s~avv~-g~~~~-~-~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~-~y~sv~~i~~~~p~vDlavi~vp~~~~~ 86 (602)
+++||| |..++ + ++.+.+.++++|+..+ +.... .+.+ .+-.|.+ +|.+++|++.. +++|+++|++|+....
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d-~~~~~-~~~~--~~~~g~~~~~~~~~~~l~~-~~~D~V~i~tp~~~h~ 76 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMS-TSAER-GAAY--ATENGIGKSVTSVEELVGD-PDVDAVYVSTTNELHR 76 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEEC-SCHHH-HHHH--HHHTTCSCCBSCHHHHHTC-TTCCEEEECSCGGGHH
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEEC-CCHHH-HHHH--HHHcCCCcccCCHHHHhcC-CCCCEEEEeCChhHhH
Confidence 577885 22233 4 6666666787765555 42211 1111 1223565 89999998764 3589999999997655
Q ss_pred HHHHHHhhCCCCcEEEEec-CCCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 87 ASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 87 ~~~~e~~~~~gv~~~viis-~Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
+.+.+++. +|. .+++-. -.....+.++|.+.|+++|+. .+|++.
T Consensus 77 ~~~~~al~-~Gk-~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~ 122 (332)
T 2glx_A 77 EQTLAAIR-AGK-HVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHL 122 (332)
T ss_dssp HHHHHHHH-TTC-EEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCG
T ss_pred HHHHHHHH-CCC-eEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehh
Confidence 55555554 774 454421 244555778999999999986 466654
No 78
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.12 E-value=0.011 Score=61.03 Aligned_cols=117 Identities=9% Similarity=0.065 Sum_probs=73.2
Q ss_pred CCCcEEEEe-eCCcH-HHHHHH-h-cCCeEEEEEeCCCCCCccccccCceeecc-cccCCHHHHhhcCCCccEEEEecCC
Q 007482 8 SKTTQALFY-NYKQL-PIQRML-D-FDFLCVAGIINPGAEGFQKLFFGQEEIAI-PVHSTVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~-~-~g~~~V~gv~~p~~~~~~~~~~g~~v~G~-~~y~sv~~i~~~~p~vDlavi~vp~ 82 (602)
++.+++||| |..|+ +++.+. . .++++|+..+ +.... .+.+ .+-.|. ++|.++++++.. +++|+++|++|.
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d-~~~~~-~~~~--a~~~g~~~~~~~~~~~l~~-~~~D~V~i~tp~ 81 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACA-LDSNQ-LEWA--KNELGVETTYTNYKDMIDT-ENIDAIFIVAPT 81 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEEC-SCHHH-HHHH--HHTTCCSEEESCHHHHHTT-SCCSEEEECSCG
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEec-CCHHH-HHHH--HHHhCCCcccCCHHHHhcC-CCCCEEEEeCCh
Confidence 345788886 33344 777777 4 4677765554 42211 1111 112355 689999998764 258999999999
Q ss_pred hhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhC-CCee-EcCC
Q 007482 83 RSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSN-NKVV-IGPA 131 (602)
Q Consensus 83 ~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~-g~ri-iGPN 131 (602)
....+.+++++. +|. .+++- .-.....+.++|.+.|+++ |+.+ +|.|
T Consensus 82 ~~h~~~~~~al~-~G~-~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~ 131 (346)
T 3cea_A 82 PFHPEMTIYAMN-AGL-NVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFM 131 (346)
T ss_dssp GGHHHHHHHHHH-TTC-EEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCG
T ss_pred HhHHHHHHHHHH-CCC-EEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecc
Confidence 875666666555 774 45442 1244555678899999999 9875 3444
No 79
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.12 E-value=0.01 Score=61.93 Aligned_cols=118 Identities=8% Similarity=-0.017 Sum_probs=73.5
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeec----ccccCCHHHHhhcCCCccEEEEec
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIA----IPVHSTVEAACAAHPMADVFINFS 80 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G----~~~y~sv~~i~~~~p~vDlavi~v 80 (602)
++.+++||| |..++ +++.+... ++++|+..+ +.... .+.+ .+-.| .++|.++++++.. +++|+++|++
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d-~~~~~-~~~~--a~~~~~~~~~~~~~~~~~ll~~-~~~D~V~i~t 79 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLAPNATISGVAS-RSLEK-AKAF--ATANNYPESTKIHGSYESLLED-PEIDALYVPL 79 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEEC-SSHHH-HHHH--HHHTTCCTTCEEESSHHHHHHC-TTCCEEEECC
T ss_pred CceEEEEECchHHHHHHHHHHhhCCCcEEEEEEc-CCHHH-HHHH--HHHhCCCCCCeeeCCHHHHhcC-CCCCEEEEcC
Confidence 356788886 33344 66777664 677765554 42211 0111 11223 4789999998764 3599999999
Q ss_pred CChhhHHHHHHHhhCCCCcEEEEec-CCCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 81 SFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 81 p~~~~~~~~~e~~~~~gv~~~viis-~Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
|.....+.+.+ |.++|. .+++=- -.....+.++|.+.|+++|+. .+|.|.
T Consensus 80 p~~~h~~~~~~-al~aGk-~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~~~~~ 131 (362)
T 1ydw_A 80 PTSLHVEWAIK-AAEKGK-HILLEKPVAMNVTEFDKIVDACEANGVQIMDGTMW 131 (362)
T ss_dssp CGGGHHHHHHH-HHTTTC-EEEECSSCSSSHHHHHHHHHHHHTTTCCEEECCCG
T ss_pred ChHHHHHHHHH-HHHCCC-eEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEee
Confidence 99765555554 555785 444421 245555788999999999986 456554
No 80
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.11 E-value=0.013 Score=57.24 Aligned_cols=70 Identities=13% Similarity=0.057 Sum_probs=50.9
Q ss_pred cCCeEEEEEeCCCCCCccccccCc-eeecccccCCHHHHh---hcCCCccEEEEecCChhhHHHHHHHhhCCCCcEEEEe
Q 007482 29 FDFLCVAGIINPGAEGFQKLFFGQ-EEIAIPVHSTVEAAC---AAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAII 104 (602)
Q Consensus 29 ~g~~~V~gv~~p~~~~~~~~~~g~-~v~G~~~y~sv~~i~---~~~p~vDlavi~vp~~~~~~~~~e~~~~~gv~~~vii 104 (602)
.||++|+.++ .... ...|. ++.|+|+|+ ++|++ .+. ++|.++|++|... ...+.+.|.+.||+++.-+
T Consensus 108 ~g~~iVg~~D-~dp~----~kiG~~~i~GvpV~~-~~dL~~~v~~~-~Id~vIIAvPs~~-aq~v~d~lv~~GIk~I~nF 179 (212)
T 3keo_A 108 NKMQISMAFD-LDSN----DLVGKTTEDGIPVYG-ISTINDHLIDS-DIETAILTVPSTE-AQEVADILVKAGIKGILSF 179 (212)
T ss_dssp SSEEEEEEEE-CTTS----TTTTCBCTTCCBEEE-GGGHHHHC-CC-SCCEEEECSCGGG-HHHHHHHHHHHTCCEEEEC
T ss_pred CCeEEEEEEe-CCch----hccCceeECCeEEeC-HHHHHHHHHHc-CCCEEEEecCchh-HHHHHHHHHHcCCCEEEEc
Confidence 5778787776 3111 02346 688999986 55543 334 4999999999874 6789999999999999998
Q ss_pred cC
Q 007482 105 AE 106 (602)
Q Consensus 105 s~ 106 (602)
|.
T Consensus 180 ap 181 (212)
T 3keo_A 180 SP 181 (212)
T ss_dssp SS
T ss_pred CC
Confidence 85
No 81
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=96.10 E-value=0.017 Score=61.24 Aligned_cols=121 Identities=12% Similarity=0.031 Sum_probs=75.5
Q ss_pred CCCCcEEEEe-eC---CcH-HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecc---cccCCHHHHhhc----CCCc
Q 007482 7 FSKTTQALFY-NY---KQL-PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAI---PVHSTVEAACAA----HPMA 73 (602)
Q Consensus 7 ~~p~s~avv~-g~---~~~-~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~---~~y~sv~~i~~~----~p~v 73 (602)
.+|-.++||| |. .|+ ++..+... ++++|+++.=+... +.+.+ .+-.|+ ++|.|++|++.. .+++
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~-~a~~~--a~~~g~~~~~~~~~~~~ll~~~~~~~~~v 86 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPI-RGSAF--GEQLGVDSERCYADYLSMFEQEARRADGI 86 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHH-HHHHH--HHHTTCCGGGBCSSHHHHHHHHTTCTTCC
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHH-HHHHH--HHHhCCCcceeeCCHHHHHhcccccCCCC
Confidence 4566899997 33 344 66666654 47777655213211 11111 123466 699999998864 1359
Q ss_pred cEEEEecCChhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCee-EcCCc
Q 007482 74 DVFINFSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV-IGPAT 132 (602)
Q Consensus 74 Dlavi~vp~~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~ri-iGPNc 132 (602)
|+++|++|.....+.+++++. +|. .+++= .-.....+.++|++.|+++|+.+ +|-|.
T Consensus 87 D~V~i~tp~~~H~~~~~~al~-aGk-hVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~ 145 (398)
T 3dty_A 87 QAVSIATPNGTHYSITKAALE-AGL-HVVCEKPLCFTVEQAENLRELSHKHNRIVGVTYGY 145 (398)
T ss_dssp SEEEEESCGGGHHHHHHHHHH-TTC-EEEECSCSCSCHHHHHHHHHHHHHTTCCEEECCGG
T ss_pred CEEEECCCcHHHHHHHHHHHH-CCC-eEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEecc
Confidence 999999999876666665555 785 44431 11345557889999999999864 45443
No 82
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=96.03 E-value=0.01 Score=61.30 Aligned_cols=116 Identities=16% Similarity=0.078 Sum_probs=72.3
Q ss_pred CCcEEEEe-eCCc-HHHHHHHhcC---CeEEEEEeCCCCCCccccccCceeecc-cccCCHHHHhhcCCCccEEEEecCC
Q 007482 9 KTTQALFY-NYKQ-LPIQRMLDFD---FLCVAGIINPGAEGFQKLFFGQEEIAI-PVHSTVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 9 p~s~avv~-g~~~-~~~~~~~~~g---~~~V~gv~~p~~~~~~~~~~g~~v~G~-~~y~sv~~i~~~~p~vDlavi~vp~ 82 (602)
|..++||| |..+ ++++.+.... +++|+..+ +... +.+.+ .+-.|+ ++|.|.+|++.. +++|+++|++|.
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d-~~~~-~a~~~--a~~~~~~~~~~~~~~ll~~-~~vD~V~i~tp~ 76 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAA-RDLS-RAKEF--AQKHDIPKAYGSYEELAKD-PNVEVAYVGTQH 76 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEEC-SSHH-HHHHH--HHHHTCSCEESSHHHHHHC-TTCCEEEECCCG
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEc-CCHH-HHHHH--HHHcCCCcccCCHHHHhcC-CCCCEEEECCCc
Confidence 34688886 3223 3666666543 46665554 4221 11111 123466 489999999875 369999999999
Q ss_pred hhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCee-EcCC
Q 007482 83 RSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV-IGPA 131 (602)
Q Consensus 83 ~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~ri-iGPN 131 (602)
....+.+++++. +| |.+++= .-.....+.++|++.|+++|+.+ +|-|
T Consensus 77 ~~H~~~~~~al~-~G-khVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~ 125 (334)
T 3ohs_X 77 PQHKAAVMLCLA-AG-KAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIW 125 (334)
T ss_dssp GGHHHHHHHHHH-TT-CEEEEESSSSSSHHHHHHHHHHHHHTTCCEEEECG
T ss_pred HHHHHHHHHHHh-cC-CEEEEECCCCCCHHHHHHHHHHHHHhCCEEEEEEh
Confidence 876666666555 78 445542 12445557889999999999864 4443
No 83
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=96.00 E-value=0.0072 Score=64.37 Aligned_cols=116 Identities=12% Similarity=-0.020 Sum_probs=73.2
Q ss_pred CcEEEEe-eCCcH-HHHHHHhc---------CCeEEEEEeCCCCCCccccccCceeecc-cccCCHHHHhhcCCCccEEE
Q 007482 10 TTQALFY-NYKQL-PIQRMLDF---------DFLCVAGIINPGAEGFQKLFFGQEEIAI-PVHSTVEAACAAHPMADVFI 77 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~---------g~~~V~gv~~p~~~~~~~~~~g~~v~G~-~~y~sv~~i~~~~p~vDlav 77 (602)
-.++||| |..++ +++.+.+. +.++|+..+ +.... .+.+ .+-.|. ++|.+.+|++.. +++|+++
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d-~~~~~-a~~~--a~~~~~~~~y~d~~~ll~~-~~vD~V~ 101 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALAD-QDQAM-AERH--AAKLGAEKAYGDWRELVND-PQVDVVD 101 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEEC-SSHHH-HHHH--HHHHTCSEEESSHHHHHHC-TTCCEEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEc-CCHHH-HHHH--HHHcCCCeEECCHHHHhcC-CCCCEEE
Confidence 3688886 32233 55555542 456665555 52211 1111 122345 599999999875 4799999
Q ss_pred EecCChhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 78 NFSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 78 i~vp~~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
|++|...-.+.+++++. +|.. +++= .-.....+.++|++.|+++|+. .+|-|.
T Consensus 102 I~tp~~~H~~~~~~al~-aGkh-Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~ 156 (412)
T 4gqa_A 102 ITSPNHLHYTMAMAAIA-AGKH-VYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNN 156 (412)
T ss_dssp ECSCGGGHHHHHHHHHH-TTCE-EEEESCSCSSHHHHHHHHHHHHHHTCCEEEECGG
T ss_pred ECCCcHHHHHHHHHHHH-cCCC-eEeecCCcCCHHHHHHHHHHHHHhCCeeeeccce
Confidence 99999876676777666 7854 4431 1244555788999999999976 556554
No 84
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=95.99 E-value=0.018 Score=59.22 Aligned_cols=115 Identities=17% Similarity=0.016 Sum_probs=71.1
Q ss_pred CcEEEEe-eCCc-HHHHHHHhc-CCeEEEEEeCCCCCCccccccCceeec-ccccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 10 TTQALFY-NYKQ-LPIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIA-IPVHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 10 ~s~avv~-g~~~-~~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G-~~~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
.+++||| |..+ .+++.+.+. ++++++..+ +... +.+.+ .+-.| .++|.+.++++ . +++|+++|++|....
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d-~~~~-~~~~~--~~~~~~~~~~~~~~~~l-~-~~~D~V~i~tp~~~h 75 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYS-RKLE-TAATF--ASRYQNIQLFDQLEVFF-K-SSFDLVYIASPNSLH 75 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEEC-SSHH-HHHHH--GGGSSSCEEESCHHHHH-T-SSCSEEEECSCGGGH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEe-CCHH-HHHHH--HHHcCCCeEeCCHHHHh-C-CCCCEEEEeCChHHH
Confidence 4678886 2223 367777664 567665554 4221 11111 11223 37899999987 3 268999999999765
Q ss_pred HHHHHHHhhCCCCcEEEEec-CCCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 86 AASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 86 ~~~~~e~~~~~gv~~~viis-~Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
.+.+.+++ ++|. .+++-. -.....+.++|.+.|+++|+. .+|.|.
T Consensus 76 ~~~~~~al-~~gk-~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~ 122 (325)
T 2ho3_A 76 FAQAKAAL-SAGK-HVILEKPAVSQPQEWFDLIQTAEKNNCFIFEAARN 122 (325)
T ss_dssp HHHHHHHH-HTTC-EEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred HHHHHHHH-HcCC-cEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEhh
Confidence 55555544 4775 455432 345566788999999999986 455553
No 85
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=95.92 E-value=0.0096 Score=64.11 Aligned_cols=117 Identities=18% Similarity=0.095 Sum_probs=72.3
Q ss_pred CCcEEEEe-eCCc--HHHHHHHhc-CCeEEEEEeCCCCCCccccccCceeeccc-----ccCCHHHHhhcCCCccEEEEe
Q 007482 9 KTTQALFY-NYKQ--LPIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIP-----VHSTVEAACAAHPMADVFINF 79 (602)
Q Consensus 9 p~s~avv~-g~~~--~~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~-----~y~sv~~i~~~~p~vDlavi~ 79 (602)
+.+++||| |..+ .+++.+.+. ++++|+.++ +.... .+.+ .+..|++ +|.+.+|++.. +++|+++|+
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d-~~~~~-~~~~--a~~~g~~~~~~~~~~~~~~ll~~-~~vD~V~ia 157 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVS-GNAEK-AKIV--AAEYGVDPRKIYDYSNFDKIAKD-PKIDAVYII 157 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEEC-SCHHH-HHHH--HHHTTCCGGGEECSSSGGGGGGC-TTCCEEEEC
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEc-CCHHH-HHHH--HHHhCCCcccccccCCHHHHhcC-CCCCEEEEc
Confidence 34678886 3333 266666664 567765555 42211 1111 1123443 79999998764 369999999
Q ss_pred cCChhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 80 SSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 80 vp~~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
+|.....+.+++++. +|. .+++= .-.....+.++|.+.|+++|+. .+|.|.
T Consensus 158 tp~~~h~~~~~~al~-aGk-~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~ 210 (433)
T 1h6d_A 158 LPNSLHAEFAIRAFK-AGK-HVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRC 210 (433)
T ss_dssp SCGGGHHHHHHHHHH-TTC-EEEECSSCCSSHHHHHHHHHHHHHHTCCEEECCGG
T ss_pred CCchhHHHHHHHHHH-CCC-cEEEcCCCCCCHHHHHHHHHHHHHhCCeEEEEech
Confidence 999875555555554 785 44442 1245556778999999999976 455544
No 86
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=95.85 E-value=0.02 Score=61.32 Aligned_cols=120 Identities=13% Similarity=0.028 Sum_probs=73.5
Q ss_pred CCCcEEEEe-eC---CcH-HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecc---cccCCHHHHhhcC----CCcc
Q 007482 8 SKTTQALFY-NY---KQL-PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAI---PVHSTVEAACAAH----PMAD 74 (602)
Q Consensus 8 ~p~s~avv~-g~---~~~-~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~---~~y~sv~~i~~~~----p~vD 74 (602)
+|..++||| |. .|+ ++..+... ++++|+++.-+... +.+.+ .+-.|+ ++|.+++|++... +++|
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~-~a~~~--a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD 112 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPE-KAEAS--GRELGLDPSRVYSDFKEMAIREAKLKNGIE 112 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHH-HHHHH--HHHHTCCGGGBCSCHHHHHHHHHHCTTCCS
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHH-HHHHH--HHHcCCCcccccCCHHHHHhcccccCCCCc
Confidence 445788886 22 233 56665554 47777655213211 11111 123467 6999999988641 3699
Q ss_pred EEEEecCChhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 75 VFINFSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 75 lavi~vp~~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
+++|++|.....+.+++ |.++|.. +++= .-.....+.++|++.|+++|+. .+|-|.
T Consensus 113 ~V~I~tp~~~H~~~~~~-al~aGkh-Vl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~ 170 (417)
T 3v5n_A 113 AVAIVTPNHVHYAAAKE-FLKRGIH-VICDKPLTSTLADAKKLKKAADESDALFVLTHNY 170 (417)
T ss_dssp EEEECSCTTSHHHHHHH-HHTTTCE-EEEESSSCSSHHHHHHHHHHHHHCSSCEEEECGG
T ss_pred EEEECCCcHHHHHHHHH-HHhCCCe-EEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecc
Confidence 99999999865555555 5557854 4431 1244555788999999999986 555554
No 87
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=95.81 E-value=0.0083 Score=62.22 Aligned_cols=112 Identities=13% Similarity=0.063 Sum_probs=71.7
Q ss_pred cEEEEe-eCCcH--HHHHHHh-cCCeEEEEEeCCCCCCccccccCceeeccc-ccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 11 TQALFY-NYKQL--PIQRMLD-FDFLCVAGIINPGAEGFQKLFFGQEEIAIP-VHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 11 s~avv~-g~~~~--~~~~~~~-~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~-~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
.++||| |.-++ ++..+.+ -++++|+.++ +... +.+.+ .+-.|+| +|.|.+|++.. +++|+++|++|...-
T Consensus 25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d-~~~~-~a~~~--a~~~g~~~~y~d~~ell~~-~~iDaV~I~tP~~~H 99 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIAS-RDLT-RAREM--ADRFSVPHAFGSYEEMLAS-DVIDAVYIPLPTSQH 99 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHHCSSEEEEEEEC-SSHH-HHHHH--HHHHTCSEEESSHHHHHHC-SSCSEEEECSCGGGH
T ss_pred EEEEEcChHHHHHHHHHHHHhCCCeEEEEEEC-CCHH-HHHHH--HHHcCCCeeeCCHHHHhcC-CCCCEEEEeCCCchh
Confidence 688885 33233 4555555 4677776555 5321 11111 1234664 89999999875 369999999999876
Q ss_pred HHHHHHHhhCCCCcEEEEecC---CCCHHHHHHHHHHHHhCCCe-eEcCC
Q 007482 86 AASSMAALKQPTIRVVAIIAE---GVPEADTKQLIAYARSNNKV-VIGPA 131 (602)
Q Consensus 86 ~~~~~e~~~~~gv~~~viis~---Gf~E~~~~~l~~~a~~~g~r-iiGPN 131 (602)
.+.+++++. +|.. ++| + .....+.++|++.|+++|+. .+|-|
T Consensus 100 ~~~~~~al~-aGkh-Vl~--EKPla~~~~ea~~l~~~a~~~~~~l~v~~~ 145 (350)
T 4had_A 100 IEWSIKAAD-AGKH-VVC--EKPLALKAGDIDAVIAARDRNKVVVTEAYM 145 (350)
T ss_dssp HHHHHHHHH-TTCE-EEE--CSCCCSSGGGGHHHHHHHHHHTCCEEECCG
T ss_pred HHHHHHHHh-cCCE-EEE--eCCcccchhhHHHHHHHHHHcCCceeEeee
Confidence 666666665 7754 433 3 33334678999999999976 45554
No 88
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=95.75 E-value=0.012 Score=64.17 Aligned_cols=117 Identities=10% Similarity=0.036 Sum_probs=75.1
Q ss_pred CCCcEEEEeeC---CcH----HHHHHHhc--CCeEEEEEeCCCCCCccccccCceeeccc---ccCCHHHHhhcCCCccE
Q 007482 8 SKTTQALFYNY---KQL----PIQRMLDF--DFLCVAGIINPGAEGFQKLFFGQEEIAIP---VHSTVEAACAAHPMADV 75 (602)
Q Consensus 8 ~p~s~avv~g~---~~~----~~~~~~~~--g~~~V~gv~~p~~~~~~~~~~g~~v~G~~---~y~sv~~i~~~~p~vDl 75 (602)
+|..++||| . +|. +++.+... ++++|+.++ +... +.+.+ .+-.|++ +|.+++|++.. +++|+
T Consensus 38 ~~irvgiIG-~g~~GG~~g~~h~~~l~~~~~~~~lvav~d-~~~~-~a~~~--a~~~g~~~~~~~~d~~ell~~-~~vD~ 111 (479)
T 2nvw_A 38 RPIRVGFVG-LTSGKSWVAKTHFLAIQQLSSQFQIVALYN-PTLK-SSLQT--IEQLQLKHATGFDSLESFAQY-KDIDM 111 (479)
T ss_dssp CCEEEEEEC-CCSTTSHHHHTHHHHHHHTTTTEEEEEEEC-SCHH-HHHHH--HHHTTCTTCEEESCHHHHHHC-TTCSE
T ss_pred CcCEEEEEc-ccCCCCHHHHHHHHHHHhcCCCeEEEEEEe-CCHH-HHHHH--HHHcCCCcceeeCCHHHHhcC-CCCCE
Confidence 345688885 4 132 77777775 677776555 4221 10111 1223555 99999998864 36999
Q ss_pred EEEecCChhhHHHHHHHhhCCCC-----cEEEEec-CCCCHHHHHHHHHHHHhCC-Ce-eEcCC
Q 007482 76 FINFSSFRSAAASSMAALKQPTI-----RVVAIIA-EGVPEADTKQLIAYARSNN-KV-VIGPA 131 (602)
Q Consensus 76 avi~vp~~~~~~~~~e~~~~~gv-----~~~viis-~Gf~E~~~~~l~~~a~~~g-~r-iiGPN 131 (602)
++|++|.....+.+++++. +|. |.++|=- -.....+.++|++.|+++| +. .+|-|
T Consensus 112 V~I~tp~~~H~~~~~~al~-aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g~~~~~v~~~ 174 (479)
T 2nvw_A 112 IVVSVKVPEHYEVVKNILE-HSSQNLNLRYLYVEWALAASVQQAEELYSISQQRANLQTIICLQ 174 (479)
T ss_dssp EEECSCHHHHHHHHHHHHH-HSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCTTCEEEEECG
T ss_pred EEEcCCcHHHHHHHHHHHH-CCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEEec
Confidence 9999999876666666665 783 6666632 2344456789999999999 75 44544
No 89
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.70 E-value=0.0087 Score=61.28 Aligned_cols=117 Identities=8% Similarity=-0.087 Sum_probs=73.8
Q ss_pred CCCCCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecC
Q 007482 4 GQLFSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 81 (602)
Q Consensus 4 ~~l~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp 81 (602)
+.-...++++||| |..|. +.++|.+.|++++ +.+ +... +.+.+ .-.|...+.|+.|+... .|+++++||
T Consensus 4 ~~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~-~~d-r~~~-~~~~~---~~~g~~~~~~~~e~~~~---aDvVi~~vp 74 (306)
T 3l6d_A 4 SDESFEFDVSVIGLGAMGTIMAQVLLKQGKRVA-IWN-RSPG-KAAAL---VAAGAHLCESVKAALSA---SPATIFVLL 74 (306)
T ss_dssp CCCCCSCSEEEECCSHHHHHHHHHHHHTTCCEE-EEC-SSHH-HHHHH---HHHTCEECSSHHHHHHH---SSEEEECCS
T ss_pred CcccCCCeEEEECCCHHHHHHHHHHHHCCCEEE-EEe-CCHH-HHHHH---HHCCCeecCCHHHHHhc---CCEEEEEeC
Confidence 3445567899996 43344 8889999999853 343 3211 01111 01367788999998763 799999999
Q ss_pred ChhhHHHHHH--HhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 82 FRSAAASSMA--ALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 82 ~~~~~~~~~e--~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
....+..+++ .+....-..++|-++.......+++.+.+++.|++++.
T Consensus 75 ~~~~~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vd 124 (306)
T 3l6d_A 75 DNHATHEVLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVK 124 (306)
T ss_dssp SHHHHHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 8755666654 22211223455555666555677888888888888664
No 90
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=95.67 E-value=0.02 Score=57.28 Aligned_cols=104 Identities=10% Similarity=0.028 Sum_probs=70.2
Q ss_pred CcEEEEe-eCCcHHHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhHHH
Q 007482 10 TTQALFY-NYKQLPIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAAS 88 (602)
Q Consensus 10 ~s~avv~-g~~~~~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~ 88 (602)
+.++++| |.-|+.+-+. . ++++++ +. -.+. .++ |+.++.++++++. ++|++|=+.+.. ++.+
T Consensus 13 ~rV~i~G~GaIG~~v~~~-~-~leLv~-v~-~~k~--------gel-gv~a~~d~d~lla---~pD~VVe~A~~~-av~e 75 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL-G-NFEKIY-AY-DRIS--------KDI-PGVVRLDEFQVPS---DVSTVVECASPE-AVKE 75 (253)
T ss_dssp CEEEEECCSHHHHHHHHH-S-CCSEEE-EE-CSSC--------CCC-SSSEECSSCCCCT---TCCEEEECSCHH-HHHH
T ss_pred ceEEEECcCHHHHHHHhc-C-CcEEEE-EE-eccc--------ccc-CceeeCCHHHHhh---CCCEEEECCCHH-HHHH
Confidence 4566664 4556633333 4 888875 42 3222 234 8888999999874 479998776554 5776
Q ss_pred HHHHhhCCCCcEEEEecCCC--CHHHHHHHHHHHHhCCCeeEcCC
Q 007482 89 SMAALKQPTIRVVAIIAEGV--PEADTKQLIAYARSNNKVVIGPA 131 (602)
Q Consensus 89 ~~e~~~~~gv~~~viis~Gf--~E~~~~~l~~~a~~~g~riiGPN 131 (602)
..+.+-++|+. +|+.|.|. .+...++|.+.|+++|.++.+|.
T Consensus 76 ~~~~iL~aG~d-vv~~S~gaLad~~l~~~L~~aA~~gg~~l~vpS 119 (253)
T 1j5p_A 76 YSLQILKNPVN-YIIISTSAFADEVFRERFFSELKNSPARVFFPS 119 (253)
T ss_dssp HHHHHTTSSSE-EEECCGGGGGSHHHHHHHHHHHHTCSCEEECCC
T ss_pred HHHHHHHCCCC-EEEcChhhhcCHHHHHHHHHHHHHCCCeEEecC
Confidence 55666667876 55566663 45577999999999999998874
No 91
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.59 E-value=0.023 Score=58.51 Aligned_cols=112 Identities=7% Similarity=0.017 Sum_probs=71.6
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhH
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAA 86 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~ 86 (602)
.++++||| |..|. +.+++.+.|++++ +.+ +... +.+.+. -.|+..+.+++|+.. +.|+++++||....+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~-~~d-r~~~-~~~~l~---~~g~~~~~~~~e~~~---~aDvVi~~vp~~~~~ 101 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQ-VWN-RTPA-RAASLA---ALGATIHEQARAAAR---DADIVVSMLENGAVV 101 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEE-EEC-SCHH-HHHHHH---TTTCEEESSHHHHHT---TCSEEEECCSSHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEE-EEc-CCHH-HHHHHH---HCCCEeeCCHHHHHh---cCCEEEEECCCHHHH
Confidence 34789997 45555 7888889999853 443 3221 111111 126788899999865 479999999976556
Q ss_pred HHHHH---HhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 87 ASSMA---ALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 87 ~~~~e---~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
..++. ......-..+||-.+..+....+++.+.+++.|++++.
T Consensus 102 ~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 147 (320)
T 4dll_A 102 QDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLD 147 (320)
T ss_dssp HHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 66663 22222234456666666666777888888888877654
No 92
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=95.56 E-value=0.016 Score=59.39 Aligned_cols=111 Identities=16% Similarity=0.024 Sum_probs=64.5
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHh-cCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLD-FDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~-~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
++.+++||| |..|+ +++.+.+ -++++++.+. +.... . ++ .|++ |.+.+++.+. +++|++++++|...
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d-~~~~~-~-----~~-~g~~-~~~~~~l~~~-~~~DvViiatp~~~ 77 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALREAPDFEIAGIVR-RNPAE-V-----PF-ELQP-FRVVSDIEQL-ESVDVALVCSPSRE 77 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC-C--------------CCTT-SCEESSGGGS-SSCCEEEECSCHHH
T ss_pred CCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEc-CCHHH-H-----HH-cCCC-cCCHHHHHhC-CCCCEEEECCCchh
Confidence 356788886 32233 7777766 4677765454 42211 1 11 4555 4444443322 36899999999876
Q ss_pred hHHHHHHHhhCCCCcEEEEecC--CCCHHHHHHHHHHHHhCCCe-eEcC
Q 007482 85 AAASSMAALKQPTIRVVAIIAE--GVPEADTKQLIAYARSNNKV-VIGP 130 (602)
Q Consensus 85 ~~~~~~e~~~~~gv~~~viis~--Gf~E~~~~~l~~~a~~~g~r-iiGP 130 (602)
..+ ..+.|.++|.+ +++-.. +......++|.+.+++.|+. ++|.
T Consensus 78 h~~-~~~~al~aG~~-Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~v~~ 124 (304)
T 3bio_A 78 VER-TALEILKKGIC-TADSFDIHDGILALRRSLGDAAGKSGAAAVIAS 124 (304)
T ss_dssp HHH-HHHHHHTTTCE-EEECCCCGGGHHHHHHHHHHHHHHHTCEEECSC
T ss_pred hHH-HHHHHHHcCCe-EEECCCCCCCCHHHHHHHHHHHHhCCCEEEEeC
Confidence 544 45555557865 444321 33344678899999999964 5553
No 93
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.54 E-value=0.023 Score=59.75 Aligned_cols=117 Identities=11% Similarity=0.038 Sum_probs=74.9
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
++.++|+||| |..|. +.++|.+.|++++ +.+ .... +.+.+. -.|+..+.|++|+....+++|+++++||..
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~-v~d-r~~~-~~~~l~---~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~- 92 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECV-VYD-LNVN-AVQALE---REGIAGARSIEEFCAKLVKPRVVWLMVPAA- 92 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SCHH-HHHHHH---TTTCBCCSSHHHHHHHSCSSCEEEECSCGG-
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEE-EEe-CCHH-HHHHHH---HCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-
Confidence 4567899996 33344 8889999999853 443 3211 111111 136788899999876432459999999998
Q ss_pred hHHHHHHHhhCC-CCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcC
Q 007482 85 AAASSMAALKQP-TIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGP 130 (602)
Q Consensus 85 ~~~~~~e~~~~~-gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGP 130 (602)
.+..+++.+... .-..+||-.+.......+++.+.+++.|+++++.
T Consensus 93 ~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vda 139 (358)
T 4e21_A 93 VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDV 139 (358)
T ss_dssp GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeC
Confidence 688888876531 2234555555555556667777888888887653
No 94
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=95.43 E-value=0.041 Score=56.22 Aligned_cols=109 Identities=9% Similarity=0.047 Sum_probs=69.5
Q ss_pred cEEEEe-eCCcH-HHHHHHhcCCeE-EEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhHH
Q 007482 11 TQALFY-NYKQL-PIQRMLDFDFLC-VAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAA 87 (602)
Q Consensus 11 s~avv~-g~~~~-~~~~~~~~g~~~-V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~ 87 (602)
+|++|| |..|. +.+||++.||++ |+-.+ |.+- +.+ .-.|.....|++|+.. +.|++++++|....+.
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~-~~~~---~~l---~~~G~~~~~s~~e~~~---~~dvvi~~l~~~~~~~ 76 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRT-ASKA---EPL---TKLGATVVENAIDAIT---PGGIVFSVLADDAAVE 76 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC-----------CTT---TTTTCEECSSGGGGCC---TTCEEEECCSSHHHHH
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCC-HHHH---HHH---HHcCCeEeCCHHHHHh---cCCceeeeccchhhHH
Confidence 588887 65566 889999999986 32222 3222 112 1246788899999765 4799999999876555
Q ss_pred HHHHH--hhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 88 SSMAA--LKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 88 ~~~e~--~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
+++.. ....+-..++|-.+-......+++.+.++++|++++.
T Consensus 77 ~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ld 120 (297)
T 4gbj_A 77 ELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVG 120 (297)
T ss_dssp HHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceec
Confidence 43211 1112223456666666666788889999999988664
No 95
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.41 E-value=0.062 Score=54.52 Aligned_cols=111 Identities=11% Similarity=0.025 Sum_probs=73.1
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhH
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAA 86 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~ 86 (602)
.++++||| |..|. +.+++.+.|++++ +.+ ..... .+.+ .-.|+..+.+++|+.+ .|+++++||....+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~-~~d-r~~~~-~~~~---~~~g~~~~~~~~~~~~----aDvvi~~vp~~~~~ 84 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVT-VYD-IRIEA-MTPL---AEAGATLADSVADVAA----ADLIHITVLDDAQV 84 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEE-EEC-SSTTT-SHHH---HHTTCEECSSHHHHTT----SSEEEECCSSHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEE-EEe-CCHHH-HHHH---HHCCCEEcCCHHHHHh----CCEEEEECCChHHH
Confidence 45799997 55555 7788888999853 343 32211 1111 1136788899999754 59999999976556
Q ss_pred HHHHHHhhCC-CCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 87 ASSMAALKQP-TIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 87 ~~~~e~~~~~-gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
..+++.+... .-..++|-.+.......+++.+..++.|++++.
T Consensus 85 ~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~ 128 (296)
T 3qha_A 85 REVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVD 128 (296)
T ss_dssp HHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 7777776531 233466666666666777788888777877654
No 96
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=95.40 E-value=0.11 Score=52.04 Aligned_cols=109 Identities=5% Similarity=-0.054 Sum_probs=66.0
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhH
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAA 86 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~ 86 (602)
+++++||| |..|. +.+++.+.|++++ ..+.|.+. +.+.. .|+..+.++.++.. +.|++++++|....+
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~~~~~~---~~~~~---~g~~~~~~~~~~~~---~~D~vi~~vp~~~~~ 72 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLH-VTTIGPVA---DELLS---LGAVNVETARQVTE---FADIIFIMVPDTPQV 72 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEE-ECCSSCCC---HHHHT---TTCBCCSSHHHHHH---TCSEEEECCSSHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEE-EEcCHHHH---HHHHH---cCCcccCCHHHHHh---cCCEEEEECCCHHHH
Confidence 46888887 45555 7778888898852 22213221 11111 26788899998765 479999999987656
Q ss_pred HHHHH---HhhC-CCCcEEEE-ecCCCCHHHHHHHHHHHHhCCCeeE
Q 007482 87 ASSMA---ALKQ-PTIRVVAI-IAEGVPEADTKQLIAYARSNNKVVI 128 (602)
Q Consensus 87 ~~~~e---~~~~-~gv~~~vi-is~Gf~E~~~~~l~~~a~~~g~rii 128 (602)
..+++ .+.. ..-..++| +++| .....+++.+.+++.|++++
T Consensus 73 ~~v~~~~~~l~~~l~~~~~vv~~s~~-~~~~~~~l~~~~~~~g~~~~ 118 (295)
T 1yb4_A 73 EDVLFGEHGCAKTSLQGKTIVDMSSI-SPIETKRFAQRVNEMGADYL 118 (295)
T ss_dssp HHHHHSTTSSTTSCCTTEEEEECSCC-CHHHHHHHHHHHHTTTEEEE
T ss_pred HHHHhCchhHhhcCCCCCEEEECCCC-CHHHHHHHHHHHHHcCCeEE
Confidence 77776 3331 12233444 3444 43455667777777676655
No 97
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=95.24 E-value=0.04 Score=56.46 Aligned_cols=110 Identities=10% Similarity=0.015 Sum_probs=73.9
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhHH
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAA 87 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~ 87 (602)
++|.+|| |..|. +.+||++.||++. +.+ .... +.+.+ .-.|.....|++|+.. ..|++++++|....+.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~-v~d-r~~~-~~~~l---~~~Ga~~a~s~~e~~~---~~dvv~~~l~~~~~v~ 74 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLN-VFD-LVQS-AVDGL---VAAGASAARSARDAVQ---GADVVISMLPASQHVE 74 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EEC-SSHH-HHHHH---HHTTCEECSSHHHHHT---TCSEEEECCSCHHHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEE-EEc-CCHH-HHHHH---HHcCCEEcCCHHHHHh---cCCceeecCCchHHHH
Confidence 3678887 66665 8899999999862 333 2211 11111 1247788899999875 4799999999987777
Q ss_pred HHHHHhh----CCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE
Q 007482 88 SSMAALK----QPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 128 (602)
Q Consensus 88 ~~~e~~~----~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii 128 (602)
+++.... ...-..++|-.+-......+++.+.++++|++++
T Consensus 75 ~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~l 119 (300)
T 3obb_A 75 GLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAML 119 (300)
T ss_dssp HHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 7775421 1112345655666666678889999999998866
No 98
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.18 E-value=0.034 Score=56.04 Aligned_cols=111 Identities=6% Similarity=-0.091 Sum_probs=71.6
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhHH
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAA 87 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~ 87 (602)
++++||| |..|. +.+++.+.|++++ ..+ +... +.+.+. -.|+..+.|++|+... .|+++++||....+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~-~~d-r~~~-~~~~~~---~~g~~~~~~~~~~~~~---aDvvi~~vp~~~~~~ 72 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVT-IWN-RSPE-KAEELA---ALGAERAATPCEVVES---CPVTFAMLADPAAAE 72 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SSGG-GGHHHH---HTTCEECSSHHHHHHH---CSEEEECCSSHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEE-EEc-CCHH-HHHHHH---HCCCeecCCHHHHHhc---CCEEEEEcCCHHHHH
Confidence 5788886 43444 7888888999863 343 3221 111111 1377888999998763 699999999654566
Q ss_pred HHH---HHhhC-CCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 88 SSM---AALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 88 ~~~---e~~~~-~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
.++ +.+.. ..-..++|-.++......+++.+.+++.|++++.
T Consensus 73 ~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pef_A 73 EVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLE 118 (287)
T ss_dssp HHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 666 33321 1223466666777777778888888888877654
No 99
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=95.18 E-value=0.018 Score=59.50 Aligned_cols=116 Identities=8% Similarity=-0.037 Sum_probs=70.9
Q ss_pred CcEEEEe-e-CCcHHHHHHHhcCCeEEEEEeCCCC---CCccccccCceeec--ccccCCHHHHhhcCCCccEEEEecCC
Q 007482 10 TTQALFY-N-YKQLPIQRMLDFDFLCVAGIINPGA---EGFQKLFFGQEEIA--IPVHSTVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 10 ~s~avv~-g-~~~~~~~~~~~~g~~~V~gv~~p~~---~~~~~~~~g~~v~G--~~~y~sv~~i~~~~p~vDlavi~vp~ 82 (602)
..++||| | ..+.+++.+ .-++++++.+. +.. ..+...+. +-.| .++|.+.+|++... ++|+++|++|.
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~-~vD~V~I~tp~ 77 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAP-GVPEEDLSKLEKAI--SEMNIKPKKYNNWWEMLEKE-KPDILVINTVF 77 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEEC-SSTTCCCHHHHHHH--HTTTCCCEECSSHHHHHHHH-CCSEEEECSSH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEec-CCchhhHHHHHHHH--HHcCCCCcccCCHHHHhcCC-CCCEEEEeCCc
Confidence 4688886 2 223355555 56777776665 422 11111110 0013 47999999998753 69999999999
Q ss_pred hhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCee-EcCCc
Q 007482 83 RSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV-IGPAT 132 (602)
Q Consensus 83 ~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~ri-iGPNc 132 (602)
..-.+.+++++. +|.. +++= .-.....+.++|++.|+++|..+ +..+.
T Consensus 78 ~~H~~~~~~al~-aGkh-Vl~EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~ 127 (337)
T 3ip3_A 78 SLNGKILLEALE-RKIH-AFVEKPIATTFEDLEKIRSVYQKVRNEVFFTAMF 127 (337)
T ss_dssp HHHHHHHHHHHH-TTCE-EEECSSSCSSHHHHHHHHHHHHHHTTTCCEEECC
T ss_pred chHHHHHHHHHH-CCCc-EEEeCCCCCCHHHHHHHHHHHHHhCCceEEEecc
Confidence 865666666555 7865 3321 11444557889999999999763 34443
No 100
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=95.16 E-value=0.048 Score=54.91 Aligned_cols=112 Identities=13% Similarity=-0.003 Sum_probs=72.2
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhHH
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAA 87 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~ 87 (602)
++++||| |..|. +.+++.+.|++++ +.+ +... +.+.+ .-.|.....+++|+... .|+++++||....+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~-~~d-r~~~-~~~~~---~~~g~~~~~~~~~~~~~---advvi~~v~~~~~~~ 72 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVT-VWN-RNPA-KCAPL---VALGARQASSPAEVCAA---CDITIAMLADPAAAR 72 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEE-EEC-SSGG-GGHHH---HHHTCEECSCHHHHHHH---CSEEEECCSSHHHHH
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEE-EEc-CCHH-HHHHH---HHCCCeecCCHHHHHHc---CCEEEEEcCCHHHHH
Confidence 4688887 45555 7788888999852 333 3221 11111 11367888899998763 699999999865566
Q ss_pred HHH---HHhhC-CCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcC
Q 007482 88 SSM---AALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGP 130 (602)
Q Consensus 88 ~~~---e~~~~-~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGP 130 (602)
.++ +.+.. ..-..++|-++.......+++.+.+++.|++++.+
T Consensus 73 ~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~ 119 (287)
T 3pdu_A 73 EVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEA 119 (287)
T ss_dssp HHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEC
Confidence 666 44432 12234566666666667778888888888876543
No 101
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.07 E-value=0.05 Score=55.59 Aligned_cols=113 Identities=10% Similarity=-0.081 Sum_probs=73.5
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
+.++|+||| |..|. +.++|.+.|++++ +.+ +... +.+.+ .-.|...+.|+.|+... .|+++++||....
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~-~~d-r~~~-~~~~l---~~~g~~~~~~~~~~~~~---aDvvi~~vp~~~~ 90 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVT-VWN-RTLS-KCDEL---VEHGASVCESPAEVIKK---CKYTIAMLSDPCA 90 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SSGG-GGHHH---HHTTCEECSSHHHHHHH---CSEEEECCSSHHH
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEE-EEe-CCHH-HHHHH---HHCCCeEcCCHHHHHHh---CCEEEEEcCCHHH
Confidence 346789886 43444 7888889999853 343 3221 11111 11367888999998763 6999999998655
Q ss_pred HHHHH---HHhhC-CCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 86 AASSM---AALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 86 ~~~~~---e~~~~-~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
+..++ +.+.. ..-..++|-++.......+++.+.+++.|++++.
T Consensus 91 ~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~ 138 (310)
T 3doj_A 91 ALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE 138 (310)
T ss_dssp HHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 66666 43321 2234466667777777777888888888887665
No 102
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=95.01 E-value=0.041 Score=59.25 Aligned_cols=119 Identities=13% Similarity=0.034 Sum_probs=73.5
Q ss_pred CCCcEEEEe-eCC-cHHHHHHHhc-CCeEEEEEeCCCCCCccccccCce--eec---ccccC----CHHHHhhcCCCccE
Q 007482 8 SKTTQALFY-NYK-QLPIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQE--EIA---IPVHS----TVEAACAAHPMADV 75 (602)
Q Consensus 8 ~p~s~avv~-g~~-~~~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~--v~G---~~~y~----sv~~i~~~~p~vDl 75 (602)
++..++||| |.. ..+++.+... ++++|+..+ +.... .+.+. ++ -.| .++|. +++|++.. +++|+
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d-~~~~~-~~~~a-~~~~~~g~~~~~~~~~~~~~~~~ll~~-~~vD~ 94 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRDDVEIVAFAD-PDPYM-VGRAQ-EILKKNGKKPAKVFGNGNDDYKNMLKD-KNIDA 94 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEC-SCHHH-HHHHH-HHHHHTTCCCCEEECSSTTTHHHHTTC-TTCCE
T ss_pred CCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEe-CCHHH-HHHHH-HHHHhcCCCCCceeccCCCCHHHHhcC-CCCCE
Confidence 345788885 222 2377777763 677765554 42211 11100 00 013 57898 99998864 36999
Q ss_pred EEEecCChhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 76 FINFSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 76 avi~vp~~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
++|++|.....+.+++++. +|. .+++= .-....++.++|++.|+++|+. .+|-|+
T Consensus 95 V~i~tp~~~h~~~~~~al~-aGk-hV~~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~ 151 (444)
T 2ixa_A 95 VFVSSPWEWHHEHGVAAMK-AGK-IVGMEVSGAITLEECWDYVKVSEQTGVPLMALENV 151 (444)
T ss_dssp EEECCCGGGHHHHHHHHHH-TTC-EEEECCCCCSSHHHHHHHHHHHHHHCCCEEECCGG
T ss_pred EEEcCCcHHHHHHHHHHHH-CCC-eEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEecc
Confidence 9999999876666666665 775 44441 1133445678999999999986 456554
No 103
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.96 E-value=0.026 Score=61.74 Aligned_cols=118 Identities=11% Similarity=-0.008 Sum_probs=69.8
Q ss_pred CCCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCcee--ecccccCCHHHHhhcCCCccEEEEecC
Q 007482 6 LFSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEE--IAIPVHSTVEAACAAHPMADVFINFSS 81 (602)
Q Consensus 6 l~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v--~G~~~y~sv~~i~~~~p~vDlavi~vp 81 (602)
-.++++|+||| |..|. +.++|.+.|++++ ..+ .... +.+.+.. +. .|+....|++|+.....+.|+++++||
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~-v~~-r~~~-~~~~l~~-~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp 87 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVS-IFN-RSRE-KTEEVIA-ENPGKKLVPYYTVKEFVESLETPRRILLMVK 87 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEE-EEC-SSHH-HHHHHHH-HSTTSCEEECSSHHHHHHTBCSSCEEEECSC
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEE-EEe-CCHH-HHHHHHh-hCCCCCeEEeCCHHHHHhCCCCCCEEEEECC
Confidence 35778899997 43344 8889999999852 333 2111 1111100 00 267788899987653112799999999
Q ss_pred ChhhHHHHHHHhhCCCC--cEEEE-ecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 82 FRSAAASSMAALKQPTI--RVVAI-IAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 82 ~~~~~~~~~e~~~~~gv--~~~vi-is~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
+...+.++++.+.. .. ..+|| .+.|.++ ..+++.+..++.|+++++
T Consensus 88 ~~~~v~~vl~~l~~-~l~~g~iIId~s~g~~~-~t~~l~~~l~~~g~~~v~ 136 (480)
T 2zyd_A 88 AGAGTDAAIDSLKP-YLDKGDIIIDGGNTFFQ-DTIRRNRELSAEGFNFIG 136 (480)
T ss_dssp SSSHHHHHHHHHGG-GCCTTCEEEECSCCCHH-HHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHh-hcCCCCEEEECCCCCHH-HHHHHHHHHHHCCCCeeC
Confidence 95557888887653 22 23443 3555544 445566667777877663
No 104
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=94.75 E-value=0.028 Score=59.35 Aligned_cols=102 Identities=12% Similarity=0.087 Sum_probs=69.4
Q ss_pred HHHhhhcC--CCcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchheeeeecC--C
Q 007482 349 STISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARA--G 424 (602)
Q Consensus 349 t~I~~~~g--~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~r~~ast--~ 424 (602)
|+|+...| ..+.|||+++.||..+. +|+++.|+||+|+.|++++.+.|..-|. .|..-+.. ...+..+. .
T Consensus 19 t~Is~idg~~g~L~YRGy~I~dLa~~~-~feev~yLLl~G~lPt~~el~~f~~~l~---~~~~lp~~--~~~~~~~~p~~ 92 (375)
T 3tqg_A 19 TSIATVGKEGHGLTYRGYRIEDLAANA-TFEEVAYLLLKNKLPTKSELDAYTKKLV---NLRSLPPA--LKDTLERIPAS 92 (375)
T ss_dssp ESSEEECTTSCCEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TTCCCCHH--HHHHHHTSCTT
T ss_pred eeceEEeCCCCEEEECCeeHHHHHhcC-CHHHHHHHHHcCcCcCHHHHHHHHHHHH---HccCCCHH--HHHHHHhCCCC
Confidence 45566543 45889999999999888 9999999999999999888888888664 45544444 23333333 4
Q ss_pred CChHHHHHHhhccCC---CCC--cChHHHHHHHHHHH
Q 007482 425 KDLVSSLVSGLLTIG---PRF--GGAIDDAARYFKDA 456 (602)
Q Consensus 425 ~~~~~av~agl~a~G---p~h--gGa~~~a~~~l~~~ 456 (602)
++|-..+.+++++++ |.. -...+.+++++..+
T Consensus 93 ~hpM~~l~~~v~aL~~~~~~~~~~~~~~~a~~LiAk~ 129 (375)
T 3tqg_A 93 SHPMDVMRTGCSMLGNLEPENGFENEQNIADRLVAIF 129 (375)
T ss_dssp SCHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHH
Confidence 667777777777753 332 22345666666654
No 105
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=94.64 E-value=0.054 Score=52.87 Aligned_cols=86 Identities=15% Similarity=-0.004 Sum_probs=54.2
Q ss_pred CcEEEEe-eCCcH-HHHHH--HhcCCeEEEEEeC-CCCCCccccccCceeecccccC--CHHHHhhcCCCccEEEEecCC
Q 007482 10 TTQALFY-NYKQL-PIQRM--LDFDFLCVAGIIN-PGAEGFQKLFFGQEEIAIPVHS--TVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~--~~~g~~~V~gv~~-p~~~~~~~~~~g~~v~G~~~y~--sv~~i~~~~p~vDlavi~vp~ 82 (602)
..++||| |..|+ +++.+ ...||++|+.++- |.+ .|..+.|+|+|. ++.++..+ . |.++|++|.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k-------~g~~i~gv~V~~~~dl~eli~~--~-D~ViIAvPs 155 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESK-------IGTEVGGVPVYNLDDLEQHVKD--E-SVAILTVPA 155 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTT-------TTCEETTEEEEEGGGHHHHCSS--C-CEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHH-------HHhHhcCCeeechhhHHHHHHh--C-CEEEEecCc
Confidence 4567775 33355 34422 2357888776661 222 246788888775 44444432 3 999999998
Q ss_pred hhhHHHHHHHhhCCCCcEEEEecC
Q 007482 83 RSAAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 83 ~~~~~~~~e~~~~~gv~~~viis~ 106 (602)
.. ...+.+.|.+.|++.++.++.
T Consensus 156 ~~-~~ei~~~l~~aGi~~Ilnf~P 178 (215)
T 2vt3_A 156 VA-AQSITDRLVALGIKGILNFTP 178 (215)
T ss_dssp HH-HHHHHHHHHHTTCCEEEECSS
T ss_pred hh-HHHHHHHHHHcCCCEEEEcCc
Confidence 64 578899999999999988763
No 106
>2h12_A Citrate synthase; acidophIle, acetic acid resistance, allostery, transferase; HET: CMX; 1.85A {Acetobacter aceti}
Probab=94.56 E-value=0.055 Score=58.29 Aligned_cols=86 Identities=15% Similarity=0.078 Sum_probs=59.7
Q ss_pred HHHHHhhhcCC--CcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchheeeee--c
Q 007482 347 IISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTA--R 422 (602)
Q Consensus 347 i~t~I~~~~g~--~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~r~~a--s 422 (602)
..|+|+...|+ .+.|||+++.||.++. +|+++.|+||+|+.|++++.+.|+..|. .|..-+.. ...+.. .
T Consensus 60 ~~S~Is~idg~~G~L~YRGy~I~dLa~~~-~feEvayLLl~G~LPt~~el~~f~~~l~---~~~~lp~~--v~~~~~~~p 133 (436)
T 2h12_A 60 CNSKITFIDGDKGVLLHRGYPIAQLAENA-SYEEVIYLLLNGELPNKAQYDTFTNTLT---NHTLLHEQ--IRNFFNGFR 133 (436)
T ss_dssp EEESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TTCSCCGG--GHHHHTTSC
T ss_pred eeeeceEEeCCCCEEEECCeEHHHHHhcC-CHHHHHHHHHcCCCCCHHHHHHHHHHHH---hccCCCHH--HHHHHHhCC
Confidence 34566776655 4679999999999998 9999999999999999888888888665 44433333 111222 2
Q ss_pred CCCChHHHHHHhhccC
Q 007482 423 AGKDLVSSLVSGLLTI 438 (602)
Q Consensus 423 t~~~~~~av~agl~a~ 438 (602)
..++|-..+.++++++
T Consensus 134 ~~~hPM~~l~~~v~aL 149 (436)
T 2h12_A 134 RDAHPMAILCGTVGAL 149 (436)
T ss_dssp TTCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 3356666666666554
No 107
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.56 E-value=0.094 Score=53.03 Aligned_cols=111 Identities=11% Similarity=0.029 Sum_probs=70.9
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhHH
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAA 87 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~ 87 (602)
++++||| |..|. +.+++.+.|++++ ..+ +... +.+.+ .-.|+..+.+..|+.. +.|+++++||....+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~-~~d-~~~~-~~~~~---~~~g~~~~~~~~~~~~---~aDvvi~~vp~~~~~~ 74 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLN-VFD-LVQS-AVDGL---VAAGASAARSARDAVQ---GADVVISMLPASQHVE 74 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EEC-SSHH-HHHHH---HHTTCEECSSHHHHHT---TCSEEEECCSCHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEE-EEc-CCHH-HHHHH---HHCCCeEcCCHHHHHh---CCCeEEEECCCHHHHH
Confidence 5788887 45555 7888889999853 343 3211 11111 1127788899999765 4799999999765567
Q ss_pred HHHH---HhhC-CCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 88 SSMA---ALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 88 ~~~e---~~~~-~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
.+++ .+.. ..-..+||-++.......+++.+..++.|++++.
T Consensus 75 ~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~ 120 (302)
T 2h78_A 75 GLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD 120 (302)
T ss_dssp HHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 7776 3332 2223455555666666667788888887877553
No 108
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=94.46 E-value=0.12 Score=45.88 Aligned_cols=85 Identities=9% Similarity=0.010 Sum_probs=52.9
Q ss_pred CCcEEEEeeCCcH---HHHHHHh-cCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHh---hcCCCccEEEEecC
Q 007482 9 KTTQALFYNYKQL---PIQRMLD-FDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAAC---AAHPMADVFINFSS 81 (602)
Q Consensus 9 p~s~avv~g~~~~---~~~~~~~-~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~---~~~p~vDlavi~vp 81 (602)
.+.++|+ |+++. +++.+.+ .||++|+-+. +... ..|..+.|+|+|. .+++. ... ++|.++|++|
T Consensus 4 ~~~vlIi-GaG~~g~~l~~~l~~~~g~~vvg~~d-~~~~-----~~g~~i~g~pV~g-~~~l~~~~~~~-~id~viia~~ 74 (141)
T 3nkl_A 4 KKKVLIY-GAGSAGLQLANMLRQGKEFHPIAFID-DDRK-----KHKTTMQGITIYR-PKYLERLIKKH-CISTVLLAVP 74 (141)
T ss_dssp CEEEEEE-CCSHHHHHHHHHHHHSSSEEEEEEEC-SCGG-----GTTCEETTEEEEC-GGGHHHHHHHH-TCCEEEECCT
T ss_pred CCEEEEE-CCCHHHHHHHHHHHhCCCcEEEEEEE-CCcc-----cCCCEecCeEEEC-HHHHHHHHHHC-CCCEEEEeCC
Confidence 3445555 65544 5555555 3888876665 3221 1235678889887 55543 333 4899999998
Q ss_pred Ch--hhHHHHHHHhhCCCCcEEE
Q 007482 82 FR--SAAASSMAALKQPTIRVVA 102 (602)
Q Consensus 82 ~~--~~~~~~~e~~~~~gv~~~v 102 (602)
.. .....+++.|.+.|++..+
T Consensus 75 ~~~~~~~~~i~~~l~~~gv~v~~ 97 (141)
T 3nkl_A 75 SASQVQKKVIIESLAKLHVEVLT 97 (141)
T ss_dssp TSCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCeEEE
Confidence 53 2346788889888888443
No 109
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=94.26 E-value=0.075 Score=58.30 Aligned_cols=115 Identities=10% Similarity=0.043 Sum_probs=68.8
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCcee--ecccccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEE--IAIPVHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v--~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
.+|+||| |..|. +.++|.+.|++++ ..+ .... +.+.+...+. .|+....|++|+.....+.|+++++||+...
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~-v~d-r~~~-~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 87 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVC-AYN-RTQS-KVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAP 87 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEE-EEC-SSSH-HHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHH
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEE-EEe-CCHH-HHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHH
Confidence 4688886 43344 8889999999852 333 3211 1111100000 4677888999876531126999999999656
Q ss_pred HHHHHHHhhCCCC--cEEEE-ecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 86 AASSMAALKQPTI--RVVAI-IAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 86 ~~~~~e~~~~~gv--~~~vi-is~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
+.++++.+.. .. ..+|| .+.+.+ ...+++.+.+++.|+++++
T Consensus 88 v~~vl~~l~~-~l~~g~iIId~s~~~~-~~~~~l~~~l~~~g~~~v~ 132 (497)
T 2p4q_A 88 VDALINQIVP-LLEKGDIIIDGGNSHF-PDSNRRYEELKKKGILFVG 132 (497)
T ss_dssp HHHHHHHHGG-GCCTTCEEEECSCCCH-HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHH-hCCCCCEEEECCCCCh-hHHHHHHHHHHHcCCceeC
Confidence 7888887653 22 23444 344444 3445566667777877664
No 110
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.14 E-value=0.021 Score=59.83 Aligned_cols=110 Identities=12% Similarity=0.054 Sum_probs=64.5
Q ss_pred CCcEEEEee-CCcHHHHHHHhcCCeE-EEEEeCCCCCCccccccCceeecc--cccCCHHHHhhcCCCccEEEEecCChh
Q 007482 9 KTTQALFYN-YKQLPIQRMLDFDFLC-VAGIINPGAEGFQKLFFGQEEIAI--PVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 9 p~s~avv~g-~~~~~~~~~~~~g~~~-V~gv~~p~~~~~~~~~~g~~v~G~--~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
++.|.|+|+ ..|+.+...+...+.+ |++++ +.+-.+.+.+ .+...+ .-..++.++.. +.|++|.++|+..
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~-~~~~~~~~~~--~~~~~~d~~d~~~l~~~~~---~~DvVi~~~p~~~ 89 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVYIGDVN-NENLEKVKEF--ATPLKVDASNFDKLVEVMK---EFELVIGALPGFL 89 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEEEEESC-HHHHHHHTTT--SEEEECCTTCHHHHHHHHT---TCSEEEECCCGGG
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeEEEEcC-HHHHHHHhcc--CCcEEEecCCHHHHHHHHh---CCCEEEEecCCcc
Confidence 456777752 3344444444556665 44443 2111011111 111122 22344555544 4799999999875
Q ss_pred hHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE
Q 007482 85 AAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 128 (602)
Q Consensus 85 ~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii 128 (602)
-..+.++|.+.|+..+= .++..+ .+.++.+.|+++|++++
T Consensus 90 -~~~v~~~~~~~g~~yvD--~s~~~~-~~~~l~~~a~~~g~~~i 129 (365)
T 3abi_A 90 -GFKSIKAAIKSKVDMVD--VSFMPE-NPLELRDEAEKAQVTIV 129 (365)
T ss_dssp -HHHHHHHHHHHTCEEEE--CCCCSS-CGGGGHHHHHHTTCEEE
T ss_pred -cchHHHHHHhcCcceEe--eeccch-hhhhhhhhhccCCceee
Confidence 57889999999987543 234443 45678889999999877
No 111
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.03 E-value=0.1 Score=53.36 Aligned_cols=112 Identities=8% Similarity=-0.001 Sum_probs=70.4
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCC-eEEEEEeCCCC-CCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDF-LCVAGIINPGA-EGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~-~~V~gv~~p~~-~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
++|+||| |..|. +.++|.+.|+ ++ .+.+ ... ....+.+ .-.|+..+.|+.|+... .|+++++||....
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V-~~~d-r~~~~~~~~~~---~~~g~~~~~~~~e~~~~---aDvVi~~vp~~~~ 96 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDM-AAYD-AASAESWRPRA---EELGVSCKASVAEVAGE---CDVIFSLVTAQAA 96 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEE-EEEC-SSCHHHHHHHH---HHTTCEECSCHHHHHHH---CSEEEECSCTTTH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeE-EEEc-CCCCHHHHHHH---HHCCCEEeCCHHHHHhc---CCEEEEecCchhH
Confidence 5788886 43344 8888999999 54 3444 321 1100101 12467888899987663 7999999999764
Q ss_pred HHHHHHHhhC-CCCcEEEEecCCCCHHHHHHHHHHHHhC--CCeeEcC
Q 007482 86 AASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSN--NKVVIGP 130 (602)
Q Consensus 86 ~~~~~e~~~~-~gv~~~viis~Gf~E~~~~~l~~~a~~~--g~riiGP 130 (602)
. .+++.+.. ..-..++|-.+.......+++.+..++. |++++.+
T Consensus 97 ~-~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~ 143 (312)
T 3qsg_A 97 L-EVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAV 143 (312)
T ss_dssp H-HHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred H-HHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEec
Confidence 4 45565543 2233466666677766777777777776 7766543
No 112
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=94.00 E-value=0.26 Score=49.38 Aligned_cols=109 Identities=12% Similarity=0.011 Sum_probs=68.3
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhHH
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAA 87 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~ 87 (602)
++++||| |..|. +.+++.+.|++++ ..+ +... +.+.+. -.|+.++.+..++.. +.|++++++|....+.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~-~~~-~~~~-~~~~~~---~~g~~~~~~~~~~~~---~~Dvvi~~vp~~~~~~ 71 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLI-IYD-VFPD-ACKEFQ---DAGEQVVSSPADVAE---KADRIITMLPTSINAI 71 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEE-EEC-SSTH-HHHHHH---TTTCEECSSHHHHHH---HCSEEEECCSSHHHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEE-EEe-CCHH-HHHHHH---HcCCeecCCHHHHHh---cCCEEEEeCCCHHHHH
Confidence 3688887 45555 7788888888752 343 3221 111111 126778889988765 3799999998766677
Q ss_pred HHHHHhhC----CCCcEEEEecCCCCHHHHHHHHHHHHhCCCee
Q 007482 88 SSMAALKQ----PTIRVVAIIAEGVPEADTKQLIAYARSNNKVV 127 (602)
Q Consensus 88 ~~~e~~~~----~gv~~~viis~Gf~E~~~~~l~~~a~~~g~ri 127 (602)
.+++.... ..-..++|-++|+.....+++.+...+.+..+
T Consensus 72 ~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~ 115 (296)
T 2gf2_A 72 EAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVF 115 (296)
T ss_dssp HHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEE
Confidence 77775321 12234566578888776677777666655444
No 113
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=93.86 E-value=0.063 Score=58.44 Aligned_cols=116 Identities=12% Similarity=0.002 Sum_probs=67.1
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCcee--ecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEE--IAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v--~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
.++|+||| |..|. +.++|.+.|+++ ...+ +... +.+.+. ++. .|+..+.+++|+.....++|+++++||+..
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V-~v~d-r~~~-~~~~l~-~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~ 80 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTV-AIYN-RTTS-KTEEVF-KEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGA 80 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCE-EEEC-SSHH-HHHHHH-HHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEE-EEEc-CCHH-HHHHHH-HhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCch
Confidence 35799997 43344 888898999985 3443 3211 111110 000 267788899997653113799999999965
Q ss_pred hHHHHHHHhhC-CCCcEEEE-ecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 85 AAASSMAALKQ-PTIRVVAI-IAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 85 ~~~~~~e~~~~-~gv~~~vi-is~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
.++.+++.+.. ..-..+|| .+.|.++ ..+++.+.+++.|+++++
T Consensus 81 ~v~~vl~~l~~~l~~g~iiId~s~~~~~-~~~~l~~~l~~~g~~~v~ 126 (474)
T 2iz1_A 81 ATDATIKSLLPLLDIGDILIDGGNTHFP-DTMRRNAELADSGINFIG 126 (474)
T ss_dssp HHHHHHHHHGGGCCTTCEEEECSCCCHH-HHHHHHHHTTTSSCEEEE
T ss_pred HHHHHHHHHHhhCCCCCEEEECCCCCHH-HHHHHHHHHHHCCCeEEC
Confidence 57788876542 11122333 3445543 445555666666776653
No 114
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=93.84 E-value=0.031 Score=59.09 Aligned_cols=103 Identities=10% Similarity=0.016 Sum_probs=66.7
Q ss_pred HHHHhhhcCC--CcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchheeeeec--C
Q 007482 348 ISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTAR--A 423 (602)
Q Consensus 348 ~t~I~~~~g~--~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~r~~as--t 423 (602)
.|+|+...|+ .+.|||+++.||..+. +|+++.|+||+|+.|++++.+.++..|.-+ ..-+.. ..++..+ .
T Consensus 14 ~t~Is~id~~~G~L~YRGy~i~~La~~~-~fEeva~LLl~G~lPt~~el~~f~~~l~~~---~~lp~~--~~~~~~~~p~ 87 (373)
T 1vgp_A 14 ETEITYIDGELGRLYYRGYSIYDLAEFS-NFEEVSYLILYGKLPNREELNWFQEKLREE---RYLPDF--IIKFLREVRK 87 (373)
T ss_dssp CCSSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHT---CCCCHH--HHHHHHHSCT
T ss_pred eeeCeEEECCCCEEEEcCeeHHHHHccC-CHHHHHHHHHCCCCcCHHHHHHHHHHHHHc---cCCCHH--HHHHHHhCCC
Confidence 3566766654 4889999999999988 999999999999999988888888766544 333333 1222222 2
Q ss_pred CCChHHHHHHhhccC---CCC-CcChHHHHHHHHHHH
Q 007482 424 GKDLVSSLVSGLLTI---GPR-FGGAIDDAARYFKDA 456 (602)
Q Consensus 424 ~~~~~~av~agl~a~---Gp~-hgGa~~~a~~~l~~~ 456 (602)
.+++-..+.++++++ -|. .-...+.+++++..+
T Consensus 88 ~~hpM~~l~~~v~~l~~~~~~~~~~~~~~a~~Lia~~ 124 (373)
T 1vgp_A 88 DAQPMDILRTAVSLLGIEDSKNDERTDIKGIKLISKF 124 (373)
T ss_dssp TSCHHHHHHHHHHHHHHHCCCCSSCHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHH
Confidence 356666666666554 231 112234466666543
No 115
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=93.79 E-value=0.17 Score=49.14 Aligned_cols=85 Identities=8% Similarity=-0.091 Sum_probs=55.0
Q ss_pred CcEEEEeeCC--cH-HHHHHHh-cCCeEEEEEeC-CCCCCccccccCceeeccccc--CCHHHHhhcCCCccEEEEecCC
Q 007482 10 TTQALFYNYK--QL-PIQRMLD-FDFLCVAGIIN-PGAEGFQKLFFGQEEIAIPVH--STVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 10 ~s~avv~g~~--~~-~~~~~~~-~g~~~V~gv~~-p~~~~~~~~~~g~~v~G~~~y--~sv~~i~~~~p~vDlavi~vp~ 82 (602)
..++|| |++ |+ +++.+.. .||++|+.++- |.+. |..+.|+|++ .++.++..+ ++|.++|++|.
T Consensus 81 ~rV~II-GaG~~G~~la~~~~~~~g~~iVg~~D~dp~k~-------g~~i~gv~V~~~~dl~ell~~--~ID~ViIA~Ps 150 (211)
T 2dt5_A 81 WGLCIV-GMGRLGSALADYPGFGESFELRGFFDVDPEKV-------GRPVRGGVIEHVDLLPQRVPG--RIEIALLTVPR 150 (211)
T ss_dssp EEEEEE-CCSHHHHHHHHCSCCCSSEEEEEEEESCTTTT-------TCEETTEEEEEGGGHHHHSTT--TCCEEEECSCH
T ss_pred CEEEEE-CccHHHHHHHHhHhhcCCcEEEEEEeCCHHHH-------hhhhcCCeeecHHhHHHHHHc--CCCEEEEeCCc
Confidence 355666 543 44 3332111 26777776651 3222 3567788875 455555443 48999999998
Q ss_pred hhhHHHHHHHhhCCCCcEEEEec
Q 007482 83 RSAAASSMAALKQPTIRVVAIIA 105 (602)
Q Consensus 83 ~~~~~~~~e~~~~~gv~~~viis 105 (602)
.. ...+.+.|.+.|++.+..++
T Consensus 151 ~~-~~ei~~~l~~aGi~~Ilnf~ 172 (211)
T 2dt5_A 151 EA-AQKAADLLVAAGIKGILNFA 172 (211)
T ss_dssp HH-HHHHHHHHHHHTCCEEEECS
T ss_pred hh-HHHHHHHHHHcCCCEEEECC
Confidence 64 66888999999999988865
No 116
>2p2w_A Citrate synthase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; HET: FLC; 1.90A {Thermotoga maritima}
Probab=93.74 E-value=0.028 Score=59.29 Aligned_cols=102 Identities=14% Similarity=0.095 Sum_probs=67.7
Q ss_pred HHHHhhhcCC--CcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchheeeeec--C
Q 007482 348 ISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTAR--A 423 (602)
Q Consensus 348 ~t~I~~~~g~--~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~r~~as--t 423 (602)
.|+|+...++ .+.|||+++.||.++. +|+++.|+||+|+.|++++.+.|+..|.-+ ..-+.. ..++..+ .
T Consensus 13 ~T~Is~id~~~G~L~YRGy~i~dLa~~~-~feeva~LLl~G~lPt~~el~~f~~~l~~~---~~lp~~--~~~~~~~~p~ 86 (367)
T 2p2w_A 13 ESSICYLDGINGRLYYRGIPVEELAEKS-TFEETAYFLWYGKLPTKSELEEFKRKMADY---RELPAE--ALGILYHLPK 86 (367)
T ss_dssp CCSSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHT---CCCCHH--HHHHHTTSCS
T ss_pred eeeCeEEECCCCEEEECCeeHHHHHcCC-CHHHHHHHHHCCCCCCHHHHHHHHHHHHHc---cCCCHH--HHHHHHhCcc
Confidence 3566766663 4889999999999998 999999999999999988888888866544 333333 1222222 3
Q ss_pred CCChHHHHHHhhccCCCCC---cChHHHHHHHHHH
Q 007482 424 GKDLVSSLVSGLLTIGPRF---GGAIDDAARYFKD 455 (602)
Q Consensus 424 ~~~~~~av~agl~a~Gp~h---gGa~~~a~~~l~~ 455 (602)
.+++-..+.+++++++... -...+.+++++..
T Consensus 87 ~~hpM~~l~~~v~~l~~~~~~~~~~~~~a~~lia~ 121 (367)
T 2p2w_A 87 NLHYIDVLKIFLSIHGSMDGNDEDLREKAIRVASV 121 (367)
T ss_dssp CCCHHHHHHHHHSCC-------CHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHhccCCChHHHHHHHHHHHHH
Confidence 4678888888888875431 1123345555554
No 117
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=93.73 E-value=0.033 Score=58.96 Aligned_cols=85 Identities=15% Similarity=0.116 Sum_probs=59.3
Q ss_pred HHHHhhhcCC--CcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchheeeeec--C
Q 007482 348 ISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTAR--A 423 (602)
Q Consensus 348 ~t~I~~~~g~--~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~r~~as--t 423 (602)
.|+|+...|+ .+.|||+++.||..+. +|+++.|+||+|+.|++++.+.|+..|.-+ ..-+.. ..++..+ .
T Consensus 14 ~t~Is~id~~~G~L~YRGy~i~dLa~~~-~fEeva~LLl~G~lPt~~el~~f~~~l~~~---~~lp~~--~~~~~~~~p~ 87 (377)
T 1iom_A 14 ESRMCYIDGQQGKLYYYGIPIQELAEKS-SFEETTFLLLHGRLPRRQELEEFSAALARR---RALPAH--LLESFKRYPV 87 (377)
T ss_dssp CCSSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHT---CSCCHH--HHHHHTTSCT
T ss_pred eeeCeEEECCCCEEEEcCeeHHHHHccC-CHHHHHHHHHCCCCcCHHHHHHHHHHHHHc---CCCCHH--HHHHHHhCCc
Confidence 4566776654 4889999999999988 999999999999999988888888866543 333333 1222222 2
Q ss_pred CCChHHHHHHhhccC
Q 007482 424 GKDLVSSLVSGLLTI 438 (602)
Q Consensus 424 ~~~~~~av~agl~a~ 438 (602)
.+++-..+.++++++
T Consensus 88 ~~hpM~~l~~~v~~l 102 (377)
T 1iom_A 88 SAHPMSFLRTAVSEF 102 (377)
T ss_dssp TSCHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHH
Confidence 356666666666554
No 118
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.65 E-value=0.15 Score=51.80 Aligned_cols=112 Identities=12% Similarity=0.007 Sum_probs=67.1
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhH
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAA 86 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~ 86 (602)
.++++||| |..|. +.+++.+.|+++ ...+ +... +.+.+. -.|...+.+..++.. +.|++++++|....+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V-~~~~-~~~~-~~~~~~---~~g~~~~~~~~~~~~---~~DvVi~av~~~~~~ 100 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTV-TVWN-RTAE-KCDLFI---QEGARLGRTPAEVVS---TCDITFACVSDPKAA 100 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCE-EEEC-SSGG-GGHHHH---HTTCEECSCHHHHHH---HCSEEEECCSSHHHH
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEE-EEEe-CCHH-HHHHHH---HcCCEEcCCHHHHHh---cCCEEEEeCCCHHHH
Confidence 36799886 33344 777888888875 2343 3221 111110 136677888888765 379999999954556
Q ss_pred HHHHHHhh----CCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 87 ASSMAALK----QPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 87 ~~~~e~~~----~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
..+++... ...-..+||..+.......+++.+...+.++++++
T Consensus 101 ~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~ 147 (316)
T 2uyy_A 101 KDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLE 147 (316)
T ss_dssp HHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 77776431 12223455544555555566777777677877664
No 119
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=93.62 E-value=0.11 Score=53.19 Aligned_cols=110 Identities=7% Similarity=0.003 Sum_probs=63.6
Q ss_pred CCcEEEEe-eCCcH--HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecccc-cCCHHHHhhcCCCccEEEEecCCh
Q 007482 9 KTTQALFY-NYKQL--PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPV-HSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 9 p~s~avv~-g~~~~--~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~-y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
+.+++||| |..++ +++.+.+. +++++ ..+ +... +.+.+ .+-.|.+. |.+..|.+.. ++|+++|++|+.
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d-~~~~-~~~~~--a~~~g~~~~~~~~~~~l~~--~~D~V~i~tp~~ 74 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCT-RNPK-VLGTL--ATRYRVSATCTDYRDVLQY--GVDAVMIHAATD 74 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEE-EEC-SCHH-HHHHH--HHHTTCCCCCSSTTGGGGG--CCSEEEECSCGG
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEE-EEe-CCHH-HHHHH--HHHcCCCccccCHHHHhhc--CCCEEEEECCch
Confidence 34688886 32232 56667664 66766 444 4221 11111 12235553 5444444432 589999999987
Q ss_pred hhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCee
Q 007482 84 SAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV 127 (602)
Q Consensus 84 ~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~ri 127 (602)
...+.+.+++. +|.. +++= .-.....+.++|.++|+++|+.+
T Consensus 75 ~h~~~~~~al~-~Gk~-V~~EKP~~~~~~~~~~l~~~a~~~g~~~ 117 (323)
T 1xea_A 75 VHSTLAAFFLH-LGIP-TFVDKPLAASAQECENLYELAEKHHQPL 117 (323)
T ss_dssp GHHHHHHHHHH-TTCC-EEEESCSCSSHHHHHHHHHHHHHTTCCE
T ss_pred hHHHHHHHHHH-CCCe-EEEeCCCcCCHHHHHHHHHHHHhcCCeE
Confidence 65555555554 7865 3332 22445557788999999999864
No 120
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=93.58 E-value=0.11 Score=52.31 Aligned_cols=109 Identities=10% Similarity=0.071 Sum_probs=64.4
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhHH
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAA 87 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~ 87 (602)
++++||| |..|. +.+++...|+++ ...+ +... +.+.+. -.|+..+.++.++.+ +.|++++++|....+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V-~~~~-~~~~-~~~~~~---~~g~~~~~~~~~~~~---~~D~vi~~v~~~~~~~ 76 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSL-VVSD-RNPE-AIADVI---AAGAETASTAKAIAE---QCDVIITMLPNSPHVK 76 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE-EEEC-SCHH-HHHHHH---HTTCEECSSHHHHHH---HCSEEEECCSSHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEE-EEEe-CCHH-HHHHHH---HCCCeecCCHHHHHh---CCCEEEEECCCHHHHH
Confidence 4788887 44455 777888888874 3443 3211 111110 126778889988765 3799999999655566
Q ss_pred HHH---HHh---hCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 88 SSM---AAL---KQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 88 ~~~---e~~---~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
.++ +.+ ...|. .+|-+++|.+ ...++|.+...+.|+.+++
T Consensus 77 ~~~~~~~~l~~~l~~~~-~vv~~s~~~~-~~~~~l~~~~~~~g~~~~~ 122 (299)
T 1vpd_A 77 EVALGENGIIEGAKPGT-VLIDMSSIAP-LASREISDALKAKGVEMLD 122 (299)
T ss_dssp HHHHSTTCHHHHCCTTC-EEEECSCCCH-HHHHHHHHHHHTTTCEEEE
T ss_pred HHHhCcchHhhcCCCCC-EEEECCCCCH-HHHHHHHHHHHHcCCeEEE
Confidence 666 222 22332 3444455554 3455677777776766554
No 121
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.55 E-value=0.24 Score=49.77 Aligned_cols=110 Identities=7% Similarity=-0.019 Sum_probs=66.1
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
++++++||| |..|. +.+++.+.|++++ ..+ +... +.+.+.. .|+..+.+..++.. +.|++++++|....
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~-~~~~-~~~~~~~---~g~~~~~~~~~~~~---~~D~vi~~vp~~~~ 73 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGVTVY-AFD-LMEA-NVAAVVA---QGAQACENNQKVAA---ASDIIFTSLPNAGI 73 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTCEEE-EEC-SSHH-HHHHHHT---TTCEECSSHHHHHH---HCSEEEECCSSHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCeEE-EEe-CCHH-HHHHHHH---CCCeecCCHHHHHh---CCCEEEEECCCHHH
Confidence 356899997 44455 7778888898753 343 3211 1111111 16778889988765 37999999987665
Q ss_pred HHHHHH---Hh---hCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE
Q 007482 86 AASSMA---AL---KQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 128 (602)
Q Consensus 86 ~~~~~e---~~---~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii 128 (602)
+..++. .+ ...| +.+|-+++|.++ ..+++.+.+++.|++++
T Consensus 74 ~~~v~~~~~~l~~~l~~~-~~vv~~~~~~~~-~~~~l~~~~~~~g~~~~ 120 (301)
T 3cky_A 74 VETVMNGPGGVLSACKAG-TVIVDMSSVSPS-STLKMAKVAAEKGIDYV 120 (301)
T ss_dssp HHHHHHSTTCHHHHSCTT-CEEEECCCCCHH-HHHHHHHHHHHTTCEEE
T ss_pred HHHHHcCcchHhhcCCCC-CEEEECCCCCHH-HHHHHHHHHHHcCCeEE
Confidence 666663 22 1123 234445666643 44567777777777765
No 122
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=93.23 E-value=0.14 Score=55.80 Aligned_cols=116 Identities=15% Similarity=0.077 Sum_probs=66.6
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCcee--ecccccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEE--IAIPVHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v--~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
++|+||| |..|. +..+|.+.|+++ ...+ .... +.+.+...+. .|+..+.+++|+.....++|+++++||+...
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V-~v~d-r~~~-~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~ 79 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVV-CAFN-RTVS-KVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQA 79 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCE-EEEC-SSTH-HHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeE-EEEe-CCHH-HHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHH
Confidence 5789996 33344 788888899985 3443 3211 1111100000 3577788999876411137999999999645
Q ss_pred HHHHHHHhhC-CCCcEEEE-ecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 86 AASSMAALKQ-PTIRVVAI-IAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 86 ~~~~~e~~~~-~gv~~~vi-is~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
++.+++.+.. ..-..+|| .+.|.++ ..+++.+..++.|+++++
T Consensus 80 v~~vl~~l~~~l~~g~iII~~s~~~~~-~~~~l~~~l~~~g~~~v~ 124 (482)
T 2pgd_A 80 VDNFIEKLVPLLDIGDIIIDGGNSEYR-DTMRRCRDLKDKGILFVG 124 (482)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSCCCHH-HHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhhcCCCCEEEECCCCCHH-HHHHHHHHHHHcCCeEeC
Confidence 7777776542 11122444 4456544 344556666667777653
No 123
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=93.15 E-value=0.3 Score=47.96 Aligned_cols=93 Identities=19% Similarity=0.175 Sum_probs=62.1
Q ss_pred EeeCCcH---HHHHHH-hcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhHHHHH
Q 007482 15 FYNYKQL---PIQRML-DFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAASSM 90 (602)
Q Consensus 15 v~g~~~~---~~~~~~-~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~~ 90 (602)
|-|..|| .+.++. +.|+++|+++. .+. + .++ . ++|++|-+..+. ++...+
T Consensus 17 v~Ga~GrMG~~i~~~~~~~~~elv~~id-~~~----------~----------~~l-~---~~DVvIDFT~P~-a~~~~~ 70 (228)
T 1vm6_A 17 IVGYSGRMGQEIQKVFSEKGHELVLKVD-VNG----------V----------EEL-D---SPDVVIDFSSPE-ALPKTV 70 (228)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEEE-TTE----------E----------EEC-S---CCSEEEECSCGG-GHHHHH
T ss_pred EEEecCHHHHHHHHHHhCCCCEEEEEEc-CCC----------c----------ccc-c---CCCEEEECCCHH-HHHHHH
Confidence 4466565 334444 47899888876 211 1 121 2 369999888776 577888
Q ss_pred HHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCc-ccc
Q 007482 91 AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPAT-VGG 135 (602)
Q Consensus 91 e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc-~G~ 135 (602)
+.|.+.|++ +||-|+||.+++.+++.+.+++ ---++-||. +|+
T Consensus 71 ~~~~~~g~~-~ViGTTG~~~~~~~~l~~~a~~-~~vv~apNfSlGv 114 (228)
T 1vm6_A 71 DLCKKYRAG-LVLGTTALKEEHLQMLRELSKE-VPVVQAYNFSIGI 114 (228)
T ss_dssp HHHHHHTCE-EEECCCSCCHHHHHHHHHHTTT-SEEEECSCCCHHH
T ss_pred HHHHHcCCC-EEEeCCCCCHHHHHHHHHHHhh-CCEEEeccccHHH
Confidence 889889987 5666899999877777777655 334788884 454
No 124
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=93.12 E-value=0.039 Score=58.99 Aligned_cols=104 Identities=13% Similarity=0.093 Sum_probs=68.0
Q ss_pred HHHHHhhhcC--CCcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchheeeeecC-
Q 007482 347 IISTISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARA- 423 (602)
Q Consensus 347 i~t~I~~~~g--~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~r~~ast- 423 (602)
..|+|+...| ..+.|||+++.||..+. +|+++.|+||+|+.|++++.+.|..-|.- |..-+.. ...+..+.
T Consensus 59 ~~t~Is~idg~~G~L~YRGy~I~dLa~~~-~fEevayLLl~G~LPt~~el~~f~~~l~~---~~~lp~~--v~~~i~~~p 132 (414)
T 3hwk_A 59 DTTAISKVVPQTNSLTYRGYPVQDLAARC-SFEQVAFLLWRGELPTDAELALFSQRERA---SRRVDRS--MLSLLAKLP 132 (414)
T ss_dssp EEESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHH---TCCCCHH--HHHHHHHSC
T ss_pred eeeeceEEeCCCCEEEECCeEHHHHHhcC-CHHHHHHHHHcCCCCCHHHHHHHHHHHHH---ccCCCHH--HHHHHHhCC
Confidence 3456666654 34889999999999888 99999999999999988888888886654 3333333 22233332
Q ss_pred -CCChHHHHHHhhccCC---CCC---cChHHHHHHHHHHH
Q 007482 424 -GKDLVSSLVSGLLTIG---PRF---GGAIDDAARYFKDA 456 (602)
Q Consensus 424 -~~~~~~av~agl~a~G---p~h---gGa~~~a~~~l~~~ 456 (602)
.+++-..+.+++++++ |.. -...+.+++++..+
T Consensus 133 ~~~hPM~~l~~~vsaL~~~~~~~~~~~~~~~~a~rLiAk~ 172 (414)
T 3hwk_A 133 DNCHPMDVVRTAISYLGAEDPDEDDAAANRAKAMRMMAVL 172 (414)
T ss_dssp TTSCHHHHHHHHHHHHHHTCTTTTCGGGHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhcCCcccCHHHHHHHHHHHHHHH
Confidence 3567677777776653 322 12334566666543
No 125
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=93.02 E-value=0.43 Score=49.42 Aligned_cols=146 Identities=18% Similarity=0.084 Sum_probs=82.7
Q ss_pred cccC--CHHHHhhcCCCccEEEEecCChhh----HHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCC
Q 007482 58 PVHS--TVEAACAAHPMADVFINFSSFRSA----AASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPA 131 (602)
Q Consensus 58 ~~y~--sv~~i~~~~p~vDlavi~vp~~~~----~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPN 131 (602)
+.|. +..++.... ++|++|+++|.... .+.+.+++. +|.. +++-.-+---..-++|.+.|+++|++++=..
T Consensus 65 ~~~~~~d~~~ll~~~-~iDvVv~~tp~~~h~~~a~~~~~~aL~-aGkh-Vv~~NKkpla~~~~eL~~~A~~~g~~~~~ea 141 (327)
T 3do5_A 65 MLRDDAKAIEVVRSA-DYDVLIEASVTRVDGGEGVNYIREALK-RGKH-VVTSNKGPLVAEFHGLMSLAERNGVRLMYEA 141 (327)
T ss_dssp SCSBCCCHHHHHHHS-CCSEEEECCCCC----CHHHHHHHHHT-TTCE-EEECCSHHHHHHHHHHHHHHHHTTCCEECGG
T ss_pred cccCCCCHHHHhcCC-CCCEEEECCCCcccchhHHHHHHHHHH-CCCe-EEecCchhhHHHHHHHHHHHHhhCCcEEEEE
Confidence 5676 999988753 69999999997532 455555554 7875 3332112111256899999999999876433
Q ss_pred cccccccCcccccccCCcccccccccCCCCCcEEEEe--cChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHH
Q 007482 132 TVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVS--KSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHIL 209 (602)
Q Consensus 132 c~G~~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvS--QSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~ 209 (602)
+.|--.|....+. .....+.|.=|. .||+..+- +....+.|. +|.|+|.
T Consensus 142 ~v~~g~Pii~~l~------------~~l~~~~I~~I~GIlnGT~nyi-lt~m~~~g~----------------~f~~~l~ 192 (327)
T 3do5_A 142 TVGGAMPVVKLAK------------RYLALCEIESVKGIFNGTCNYI-LSRMEEERL----------------PYEHILK 192 (327)
T ss_dssp GSSTTSCCHHHHH------------TTTTTSCEEEEEEECCHHHHHH-HHHHHHHCC----------------CHHHHHH
T ss_pred EeeecCHHHHHHH------------HHhhCCCccEEEEEECCCcCcc-hhhcCcCCc----------------CHHHHHH
Confidence 3333334321110 113456666555 38886554 343333344 4555544
Q ss_pred ------HhhcCCCccEEEEEEecCCCcHHHHHHHHHhc
Q 007482 210 ------RFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 241 (602)
Q Consensus 210 ------~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~ 241 (602)
|-+.||.-.+ | |..-.+|++=.++.+
T Consensus 193 ~Aq~~GyaE~DP~~Dv-----~-G~D~a~Kl~ILa~~~ 224 (327)
T 3do5_A 193 EAQELGYAEADPSYDV-----E-GIDAALKLVIIANTI 224 (327)
T ss_dssp HHHHTTSSCSSCHHHH-----T-SHHHHHHHHHHHHHT
T ss_pred HHHHcCCCCCCchhhc-----C-ChhHHHHHHHHHHhh
Confidence 4555666443 4 545556666666654
No 126
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=92.91 E-value=0.11 Score=56.52 Aligned_cols=116 Identities=11% Similarity=-0.002 Sum_probs=65.3
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccc---cCc--eeecccccCCHHHHhhcCCCccEEEEecCC
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLF---FGQ--EEIAIPVHSTVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~---~g~--~v~G~~~y~sv~~i~~~~p~vDlavi~vp~ 82 (602)
++|+||| |..|. +..+|.+.|+++ ...+ .... +.+.+ .|. .-.++..+.+++|+.....++|+++++||+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V-~v~d-r~~~-~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~ 78 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKV-AVFN-RTYS-KSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQA 78 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCE-EEEC-SSHH-HHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCC
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEE-EEEe-CCHH-HHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCC
Confidence 5789997 33344 788888899985 3443 3111 11111 010 001266788998876531137999999999
Q ss_pred hhhHHHHHHHhhC-CCCcEEEE-ecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 83 RSAAASSMAALKQ-PTIRVVAI-IAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 83 ~~~~~~~~e~~~~-~gv~~~vi-is~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
...++.+++.+.. ..-..+|| .+.|.++ ..+++.+.+++.|+++++
T Consensus 79 ~~~v~~vl~~l~~~l~~g~iIId~sng~~~-~~~~l~~~l~~~g~~~v~ 126 (478)
T 1pgj_A 79 GAATDSTIEQLKKVFEKGDILVDTGNAHFK-DQGRRAQQLEAAGLRFLG 126 (478)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEECCCCCHH-HHHHHHHHHHTTTCEEEE
T ss_pred hHHHHHHHHHHHhhCCCCCEEEECCCCChH-HHHHHHHHHHHCCCeEEE
Confidence 6457777766532 11122443 3445543 445566666666776654
No 127
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=92.87 E-value=0.049 Score=57.34 Aligned_cols=111 Identities=11% Similarity=0.023 Sum_probs=62.9
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCCeE-EEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDFLC-VAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~~~-V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
.++++|+| |..|+ ++++|.+. +++ |+..+ +.+..+.....+.....+.-+.++.++.. ++|++|.++|...
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~-~~~a~~la~~~~~~~~d~~~~~~l~~ll~---~~DvVIn~~P~~~- 89 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVN-NENLEKVKEFATPLKVDASNFDKLVEVMK---EFELVIGALPGFL- 89 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESC-HHHHHHHTTTSEEEECCTTCHHHHHHHHT---TCSCEEECCCHHH-
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECC-HHHHHHHHhhCCeEEEecCCHHHHHHHHh---CCCEEEECCChhh-
Confidence 34555554 22233 77777776 664 43333 31111100000101111223456677655 4799999999865
Q ss_pred HHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE
Q 007482 86 AASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 128 (602)
Q Consensus 86 ~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii 128 (602)
...+.++|.+.|+..+- +| ..++ ...++.+.|+++|+.++
T Consensus 90 ~~~v~~a~l~~G~~~vD-~s-~~~~-~~~~l~~~Ak~aG~~~l 129 (365)
T 2z2v_A 90 GFKSIKAAIKSKVDMVD-VS-FMPE-NPLELRDEAEKAQVTIV 129 (365)
T ss_dssp HHHHHHHHHHTTCCEEE-CC-CCSS-CGGGGHHHHHHTTCEEE
T ss_pred hHHHHHHHHHhCCeEEE-cc-CCcH-HHHHHHHHHHHcCCEEE
Confidence 45678888888887433 33 3333 34578899999999987
No 128
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=92.83 E-value=0.16 Score=53.15 Aligned_cols=105 Identities=18% Similarity=0.082 Sum_probs=70.7
Q ss_pred CCcHHHHHHHhc-CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh------hhHHHHH
Q 007482 18 YKQLPIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR------SAAASSM 90 (602)
Q Consensus 18 ~~~~~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~------~~~~~~~ 90 (602)
..++...-+++| ++++|+.+.....+.+.+++.|. -.|+|.+.|+++++.. ++|.+|+.+.+. ...+.+.
T Consensus 21 ~~aKta~gl~r~~~~~iVgvid~~~~G~d~ge~~g~-~~gipi~~~l~~al~~--~~d~lvig~a~~gG~l~~~~~~~i~ 97 (349)
T 2obn_A 21 TIGKTGLALLRYSEAPIVAVIDRNCAGQSLREITGI-YRYVPIVKSVEAALEY--KPQVLVIGIAPKGGGIPDDYWIELK 97 (349)
T ss_dssp SSCHHHHHHHHHCCSCEEEEECGGGTTSCHHHHHCC-CSCCCEESSHHHHGGG--CCSEEEECCCCCCC-SCGGGHHHHH
T ss_pred HHHHHhHHhhhcCCCcEEEEEeCCCCCCcHHHhcCC-cCCCCccCCHHHHHhC--CCCEEEEEecCCCCCCCHHHHHHHH
Confidence 334566667775 78998777644444477777774 5689999999999864 479999997221 2345666
Q ss_pred HHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 91 AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 91 e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
++++ +|..-+ -+-+.+-.+..+|.++|++ |.++++
T Consensus 98 ~Al~-~G~~Vv--sglh~~l~~~pel~~~A~~-g~~i~d 132 (349)
T 2obn_A 98 TALQ-AGMSLV--NGLHTPLANIPDLNALLQP-GQLIWD 132 (349)
T ss_dssp HHHH-TTCEEE--ECSSSCCTTCHHHHHHCCT-TCCEEE
T ss_pred HHHH-cCCcEE--eCccchhhCCHHHHHHHHc-CCEEEE
Confidence 6665 787621 1223333345668999999 988876
No 129
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.79 E-value=0.3 Score=53.27 Aligned_cols=118 Identities=13% Similarity=0.058 Sum_probs=70.0
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeec--ccccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIA--IPVHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G--~~~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
++|+||| |..|. +.++|.+.|++++ +.+ .... +.+.+......| +..+.|++|+.....+.|+++++||+...
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~-v~d-r~~~-~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 81 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVC-AFN-RTVS-KVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQA 81 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEE-EEC-SSTH-HHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHH
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEE-EEe-CCHH-HHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHH
Confidence 5789886 43343 8889999999863 343 3221 111110000112 33468899987532237999999999656
Q ss_pred HHHHHHHhhCC-CCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcC
Q 007482 86 AASSMAALKQP-TIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGP 130 (602)
Q Consensus 86 ~~~~~e~~~~~-gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGP 130 (602)
++.+++.+... .-..+||-.+.-...+..++.+..++.|+++++.
T Consensus 82 v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~ 127 (484)
T 4gwg_A 82 VDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGS 127 (484)
T ss_dssp HHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccC
Confidence 77788776531 1233555444445555556667777888887653
No 130
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.76 E-value=0.085 Score=53.60 Aligned_cols=112 Identities=6% Similarity=0.016 Sum_probs=69.1
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccc-cCCHHHHhhcCCCccEEEEecCChhh
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPV-HSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~-y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
.++++||| |..|. +.++|.+.|++++ +.+ .... +.+.+ .-.|... ..|++|+.. +.|+++++||....
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~-~~d-r~~~-~~~~~---~~~g~~~~~~~~~e~~~---~aDvvi~~vp~~~~ 77 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTW-GAD-LNPQ-ACANL---LAEGACGAAASAREFAG---VVDALVILVVNAAQ 77 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SCHH-HHHHH---HHTTCSEEESSSTTTTT---TCSEEEECCSSHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEE-EEE-CCHH-HHHHH---HHcCCccccCCHHHHHh---cCCEEEEECCCHHH
Confidence 35789886 33344 7888889999853 333 3211 01111 0124555 778888654 47999999998655
Q ss_pred HHHHH---HHhhC-CCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 86 AASSM---AALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 86 ~~~~~---e~~~~-~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
+..++ +.+.. ..-..++|-++.......+++.+..++.|+.++.
T Consensus 78 ~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 78 VRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp HHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 66665 43331 1223466666667776777888888887777654
No 131
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=92.48 E-value=0.095 Score=56.60 Aligned_cols=118 Identities=13% Similarity=0.056 Sum_probs=69.1
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHh-cCCeEEEEEeCCCCCC--c-cccccCc--e---------e------ecccccCCHH
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLD-FDFLCVAGIINPGAEG--F-QKLFFGQ--E---------E------IAIPVHSTVE 64 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~-~g~~~V~gv~~p~~~~--~-~~~~~g~--~---------v------~G~~~y~sv~ 64 (602)
+|-.++||| |..|+ +++++.. -+.++++..+ ..... . .+.++|. . + .+.++|.+.+
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D-~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~e 100 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSA-RRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDND 100 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEEC-SSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHH
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEe-CCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHH
Confidence 356788886 33333 6666655 4566665554 32211 0 0111131 0 0 1356899999
Q ss_pred HHhhcCCCccEEEEecCChh-hHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 65 AACAAHPMADVFINFSSFRS-AAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 65 ~i~~~~p~vDlavi~vp~~~-~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
+++.. +++|++++++|... ..+.+++++. +|.. +++..-......-++|.++|+++|+.+..
T Consensus 101 eLL~d-~dIDaVviaTp~p~~H~e~a~~AL~-AGKH-Vv~~nk~l~~~eg~eL~~~A~e~Gvvl~~ 163 (446)
T 3upl_A 101 LILSN-PLIDVIIDATGIPEVGAETGIAAIR-NGKH-LVMMNVEADVTIGPYLKAQADKQGVIYSL 163 (446)
T ss_dssp HHHTC-TTCCEEEECSCCHHHHHHHHHHHHH-TTCE-EEECCHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHhcC-CCCCEEEEcCCChHHHHHHHHHHHH-cCCc-EEecCcccCHHHHHHHHHHHHHhCCeeee
Confidence 98865 46999999998743 3456666666 6754 55433211112457999999999987543
No 132
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=92.37 E-value=0.18 Score=50.72 Aligned_cols=94 Identities=12% Similarity=0.092 Sum_probs=59.2
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCC---eEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDF---LCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~---~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
.++++||| |..|. +.+.+.+.|+ ++ ...+ +.... .+.+ .+-.|+.++.+..++.. +.|++|++||+.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V-~v~d-r~~~~-~~~l--~~~~gi~~~~~~~~~~~---~aDvVilav~p~ 74 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRI-CVTN-RSLDK-LDFF--KEKCGVHTTQDNRQGAL---NADVVVLAVKPH 74 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGE-EEEC-SSSHH-HHHH--HHTTCCEEESCHHHHHS---SCSEEEECSCGG
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeE-EEEe-CCHHH-HHHH--HHHcCCEEeCChHHHHh---cCCeEEEEeCHH
Confidence 46899997 33344 8888888888 53 3343 32211 1111 11136788888888765 479999999986
Q ss_pred hhHHHHHHHhhCC--CCc-EEEEecCCCCHH
Q 007482 84 SAAASSMAALKQP--TIR-VVAIIAEGVPEA 111 (602)
Q Consensus 84 ~~~~~~~e~~~~~--gv~-~~viis~Gf~E~ 111 (602)
.+.++++++... .-+ .+|-+++|++-.
T Consensus 75 -~~~~vl~~l~~~~l~~~~iiiS~~agi~~~ 104 (280)
T 3tri_A 75 -QIKMVCEELKDILSETKILVISLAVGVTTP 104 (280)
T ss_dssp -GHHHHHHHHHHHHHTTTCEEEECCTTCCHH
T ss_pred -HHHHHHHHHHhhccCCCeEEEEecCCCCHH
Confidence 578888877532 223 455567899854
No 133
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=92.07 E-value=0.05 Score=59.31 Aligned_cols=93 Identities=9% Similarity=0.029 Sum_probs=59.5
Q ss_pred CcEEEEe-eCCcH-HHHHHHhc------CCeEEEEEeCCCCCCccccccCceeecccc----cCCHHHHhhcCCCccEEE
Q 007482 10 TTQALFY-NYKQL-PIQRMLDF------DFLCVAGIINPGAEGFQKLFFGQEEIAIPV----HSTVEAACAAHPMADVFI 77 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~------g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~----y~sv~~i~~~~p~vDlav 77 (602)
++|+||| |..|. +.++|++. |++++.+.....+..+. .+-.|+.. ..++.|+.+. .|+++
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~-----A~e~G~~v~d~ta~s~aEAa~~---ADVVI 126 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDE-----ARAAGFTEESGTLGDIWETVSG---SDLVL 126 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHH-----HHHTTCCTTTTCEEEHHHHHHH---CSEEE
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHH-----HHHCCCEEecCCCCCHHHHHhc---CCEEE
Confidence 6899997 44444 88999998 99876555411221000 12345654 2678888763 79999
Q ss_pred EecCChhhHHHHHHHhhC-CCCcEEEEecCCCCHH
Q 007482 78 NFSSFRSAAASSMAALKQ-PTIRVVAIIAEGVPEA 111 (602)
Q Consensus 78 i~vp~~~~~~~~~e~~~~-~gv~~~viis~Gf~E~ 111 (602)
+++|+.. ...+++++.. ..-..+++++.||.-.
T Consensus 127 LaVP~~~-~~eVl~eI~p~LK~GaILs~AaGf~I~ 160 (525)
T 3fr7_A 127 LLISDAA-QADNYEKIFSHMKPNSILGLSHGFLLG 160 (525)
T ss_dssp ECSCHHH-HHHHHHHHHHHSCTTCEEEESSSHHHH
T ss_pred ECCChHH-HHHHHHHHHHhcCCCCeEEEeCCCCHH
Confidence 9999864 4456655432 2234578999999754
No 134
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=92.06 E-value=0.061 Score=56.96 Aligned_cols=86 Identities=12% Similarity=0.071 Sum_probs=60.1
Q ss_pred HHHHHhhhcCC--CcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchheeeeecC-
Q 007482 347 IISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARA- 423 (602)
Q Consensus 347 i~t~I~~~~g~--~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~r~~ast- 423 (602)
..|+|+...|+ .+.|||+++.||..+. +|+++.|+||+|+.|++++.+.|...|. +|..-+.. ..++..+.
T Consensus 15 ~~t~Is~id~~~G~L~YRGy~i~dLa~~~-~fEeva~LLl~G~lP~~~el~~f~~~l~---~~~~lp~~--~~~~~~~~p 88 (378)
T 1a59_A 15 DVTAISKVNSDTNSLLYRGYPVQELAAKC-SFEQVAYLLWNSELPNDSELKAFVNFER---SHRKLDEN--VKGAIDLLS 88 (378)
T ss_dssp CCCSSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TSCSCCHH--HHHHHTTSC
T ss_pred eeeeceEEECCCCeEEEcCccHHHHHhcC-CHHHHHHHHHcCCCCCHHHHHHHHHHHH---HcCCCCHH--HHHHHHhCC
Confidence 34567776664 4889999999999988 9999999999999999888888887664 44443333 12232232
Q ss_pred -CCChHHHHHHhhccC
Q 007482 424 -GKDLVSSLVSGLLTI 438 (602)
Q Consensus 424 -~~~~~~av~agl~a~ 438 (602)
.++|-..+.++++++
T Consensus 89 ~~~hpM~~l~~~v~~l 104 (378)
T 1a59_A 89 TACHPMDVARTAVSVL 104 (378)
T ss_dssp TTSCHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHH
Confidence 356666666666554
No 135
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=91.96 E-value=0.15 Score=52.94 Aligned_cols=108 Identities=16% Similarity=0.115 Sum_probs=66.2
Q ss_pred CCCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 6 LFSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 6 l~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
-+.-+++.||| |..|+ +.+.+..+|++++ +.+ +... ...|...+.++.++.. +.|++++++|..
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~-~~d-r~~~---------~~~g~~~~~~l~ell~---~aDvVil~vP~~ 226 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAFDCPIS-YFS-RSKK---------PNTNYTYYGSVVELAS---NSDILVVACPLT 226 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCCEE-EEC-SSCC---------TTCCSEEESCHHHHHH---TCSEEEECSCCC
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEC-CCch---------hccCceecCCHHHHHh---cCCEEEEecCCC
Confidence 35567899996 44444 7778888999853 444 4221 1125566788998776 479999999974
Q ss_pred hhH-----HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcC
Q 007482 84 SAA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGP 130 (602)
Q Consensus 84 ~~~-----~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGP 130 (602)
... ...++.+. .| .++|-++--...++++|.+..++.+++-.|-
T Consensus 227 ~~t~~li~~~~l~~mk-~g--ailIn~srG~~vd~~aL~~aL~~g~i~ga~l 275 (333)
T 3ba1_A 227 PETTHIINREVIDALG-PK--GVLINIGRGPHVDEPELVSALVEGRLGGAGL 275 (333)
T ss_dssp GGGTTCBCHHHHHHHC-TT--CEEEECSCGGGBCHHHHHHHHHHTSSCEEEE
T ss_pred hHHHHHhhHHHHhcCC-CC--CEEEECCCCchhCHHHHHHHHHcCCCeEEEE
Confidence 322 23445443 33 2343333223346788888888877665553
No 136
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=91.93 E-value=0.3 Score=51.08 Aligned_cols=75 Identities=12% Similarity=0.069 Sum_probs=53.8
Q ss_pred eccc-ccCCHHHHhhcCCCccEEEEecCChhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCe-eEcCC
Q 007482 55 IAIP-VHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPA 131 (602)
Q Consensus 55 ~G~~-~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~r-iiGPN 131 (602)
.|++ +|.+++|++.. +++|+++|++|.....+.+++++. +|.. +++= .-.....+.++|.+.|+++|+. .+|.|
T Consensus 66 ~~~~~~~~~~~~ll~~-~~iD~V~i~tp~~~h~~~~~~al~-~Gk~-V~~EKP~a~~~~~~~~l~~~a~~~~~~~~v~~~ 142 (383)
T 3oqb_A 66 FNIARWTTDLDAALAD-KNDTMFFDAATTQARPGLLTQAIN-AGKH-VYCEKPIATNFEEALEVVKLANSKGVKHGTVQD 142 (383)
T ss_dssp TTCCCEESCHHHHHHC-SSCCEEEECSCSSSSHHHHHHHHT-TTCE-EEECSCSCSSHHHHHHHHHHHHHTTCCEEECCG
T ss_pred hCCCcccCCHHHHhcC-CCCCEEEECCCchHHHHHHHHHHH-CCCe-EEEcCCCCCCHHHHHHHHHHHHHcCCeEEEEec
Confidence 4664 89999999875 469999999998776666666554 7854 4321 1245556788999999999985 45555
Q ss_pred c
Q 007482 132 T 132 (602)
Q Consensus 132 c 132 (602)
.
T Consensus 143 ~ 143 (383)
T 3oqb_A 143 K 143 (383)
T ss_dssp G
T ss_pred c
Confidence 3
No 137
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A*
Probab=91.89 E-value=0.37 Score=51.74 Aligned_cols=96 Identities=11% Similarity=0.064 Sum_probs=76.6
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCC--ceeEEeeccCCCCCCC-CHHH----HHHHhhcCCCccEEEEEEecCCCc--
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVTD--GIYEGIAIGGDVFPGS-TLSD----HILRFNNIPQVKMMVVLGELGGRD-- 230 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g~--G~s~~vs~Gn~~~~dv-~~~d----~l~~l~~Dp~t~~I~ly~E~g~~~-- 230 (602)
..|+|+.+.-.++++.+.+|.....|- -...|..+|+.+ +. .+.+ .++-+..||++|+|++-+=-|+.+
T Consensus 271 ldG~Ig~mvNGaGlamat~D~i~~~Gg~~~pANflD~gG~a--~~e~v~~~~~~~l~ii~~d~~vk~i~vnIfGGI~~cd 348 (425)
T 3mwd_A 271 PKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAP--SEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFT 348 (425)
T ss_dssp TTCSEEECCBSHHHHHHHHHHHHHTTCGGGBCEEEEEESCC--CHHHHHHHHHHHHHHTTSSCCTTCEEEEECBCBCSSS
T ss_pred cCCeEEEEecCchHHHHHHHHHHHcCCCcCCcceEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCcccHH
Confidence 479999999999999999999999988 579999999988 32 2333 478888999999999987734443
Q ss_pred --H---HHHHHHHHhc-----CCCCCEEEEEeCcCcc
Q 007482 231 --E---YSLVEALKQG-----KVNKPVVAWVSGTCAR 257 (602)
Q Consensus 231 --~---~~f~~~~r~~-----~~~KPVv~~k~Gr~~~ 257 (602)
. +...+++++. ..++|||+-..|.+..
T Consensus 349 ~vA~t~~GIi~A~~~~~~~~~~~~~PivVRl~Gtn~~ 385 (425)
T 3mwd_A 349 NVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQ 385 (425)
T ss_dssp CHHHHHHHHHHHHHHTHHHHHHTTEEEEEECBSTTHH
T ss_pred HHHHHHhHHHHHHHHhhhccccCCCcEEEECCcCCHH
Confidence 3 5577788875 3689999988887653
No 138
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=91.81 E-value=0.29 Score=48.73 Aligned_cols=108 Identities=11% Similarity=-0.105 Sum_probs=62.3
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhHH
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAA 87 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~ 87 (602)
++++||| |..|. +.+++.+ |+++ ...+ +... +.+.+. -.|...+. ..++.. +.|++++++|....+.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V-~~~~-~~~~-~~~~~~---~~g~~~~~-~~~~~~---~~D~vi~~v~~~~~~~ 70 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPT-LVWN-RTFE-KALRHQ---EEFGSEAV-PLERVA---EARVIFTCLPTTREVY 70 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCE-EEEC-SSTH-HHHHHH---HHHCCEEC-CGGGGG---GCSEEEECCSSHHHHH
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeE-EEEe-CCHH-HHHHHH---HCCCcccC-HHHHHh---CCCEEEEeCCChHHHH
Confidence 4688887 45555 7788888 9885 3343 3221 111110 01445554 556544 3799999999875567
Q ss_pred HHHHHhhC-CCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE
Q 007482 88 SSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 128 (602)
Q Consensus 88 ~~~e~~~~-~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii 128 (602)
.+++.+.. ..-..+++..+.......+++.+.+++.|++++
T Consensus 71 ~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 112 (289)
T 2cvz_A 71 EVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYL 112 (289)
T ss_dssp HHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEE
T ss_pred HHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 77776642 122344554445554456677777777666554
No 139
>3l96_A Citrate synthase; quaternary, hexamer, GRAM-negative bacteri allostery, oxaloacetate, acetylcoa, NADH, allosteric enzyme transferase; 1.90A {Escherichia coli} SCOP: a.103.1.1 PDB: 3l97_A* 3l98_A* 3l99_A 1k3p_A 1nxe_A 1nxg_A* 1owb_A* 1owc_A 4e6y_A
Probab=91.60 E-value=0.23 Score=53.26 Aligned_cols=85 Identities=11% Similarity=0.005 Sum_probs=61.9
Q ss_pred HHHhhhcCC--CcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchheeeeecC--C
Q 007482 349 STISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARA--G 424 (602)
Q Consensus 349 t~I~~~~g~--~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~r~~ast--~ 424 (602)
|+|+...|+ .+.|||+++.||..+. +|+++.|+||+|+.|++++.+.|..-|.- |..-+.. ..++..+. .
T Consensus 54 s~is~iDg~~G~L~YRGy~I~dLa~~~-~feevayLLl~G~LPt~~el~~f~~~l~~---~~~lp~~--~~~~~~~~p~~ 127 (426)
T 3l96_A 54 SKITFIDGDEGILLHRGFPIDQLATDS-NYLEVCYILLNGEKPTQEQYDEFKTTVTR---HTMIHEQ--ITRLFHAFRRD 127 (426)
T ss_dssp ESSEEEEGGGTEEEETTEEHHHHHHHS-CHHHHHHHHHHSSCCCHHHHHHHHHHHHH---TCSCCHH--HHHHHTTSCTT
T ss_pred EEeEEEECCCCEEEECCeEHHHHHhcC-CHHHHHHHHHCCcCCCHHHHHHHHHHHHH---ccCCCHH--HHHHHHhcCCC
Confidence 455555443 3689999999999888 99999999999999988888888886654 4443333 33344443 3
Q ss_pred CChHHHHHHhhccCC
Q 007482 425 KDLVSSLVSGLLTIG 439 (602)
Q Consensus 425 ~~~~~av~agl~a~G 439 (602)
++|-..+.+++++++
T Consensus 128 ~hPM~~l~~~vsaL~ 142 (426)
T 3l96_A 128 SHPMAVMCGITGALA 142 (426)
T ss_dssp SCHHHHHHHHHTTGG
T ss_pred CCHHHHHHHHHHHHH
Confidence 678888888888875
No 140
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=91.40 E-value=0.39 Score=51.80 Aligned_cols=162 Identities=10% Similarity=0.089 Sum_probs=88.3
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHh----------cCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccE
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLD----------FDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADV 75 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~----------~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDl 75 (602)
.+-.++|+| |.-|+ +++.+.+ .++++++..+ +... +.+.+ ..+.+.|.+..|++.. +++|+
T Consensus 9 k~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d-~~~~-~~~~~----~~~~~~~~d~~ell~d-~diDv 81 (444)
T 3mtj_A 9 KPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAV-RNLD-KAEAL----AGGLPLTTNPFDVVDD-PEIDI 81 (444)
T ss_dssp SCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEEC-SCHH-HHHHH----HTTCCEESCTHHHHTC-TTCCE
T ss_pred CcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEE-CCHH-Hhhhh----cccCcccCCHHHHhcC-CCCCE
Confidence 345788886 33333 4444432 3455554444 4221 11111 2356789999998865 47999
Q ss_pred EEEecCC-hhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE-cCCcccccccCcccccccCCccccc
Q 007482 76 FINFSSF-RSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI-GPATVGGIQAGAFKIGDTAGTIDNI 153 (602)
Q Consensus 76 avi~vp~-~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii-GPNc~G~~~~~~~~l~~~~~~~~~~ 153 (602)
+++++|. ....+-+.+++. +|.+ +++---......-++|.+.|+++|+.+. -.+..|. .|....+
T Consensus 82 Vve~tp~~~~h~~~~~~AL~-aGKh-Vvtenkal~a~~~~eL~~~A~~~gv~l~~Ea~V~~g-iPii~~L---------- 148 (444)
T 3mtj_A 82 VVELIGGLEPARELVMQAIA-NGKH-VVTANKHLVAKYGNEIFAAAQAKGVMVTFEAAVAGG-IPIIKAL---------- 148 (444)
T ss_dssp EEECCCSSTTHHHHHHHHHH-TTCE-EEECCHHHHHHHHHHHHHHHHHHTCCEECGGGSSTT-SCHHHHH----------
T ss_pred EEEcCCCchHHHHHHHHHHH-cCCE-EEECCcccCHHHHHHHHHHHHHhCCeEEEEEeeeCC-hHHHHHH----------
Confidence 9999996 444455556555 7865 4331111111145899999999999874 3333322 2321011
Q ss_pred ccccCCCCCcEEEEe--cChhHHHHHHHHHHhcCCceeEEe
Q 007482 154 IHCKLYRPGSVGFVS--KSGGMSNELYNTIARVTDGIYEGI 192 (602)
Q Consensus 154 ~p~~~~~~G~valvS--QSG~l~~~~~~~~~~~g~G~s~~v 192 (602)
...+..|.|+=|. -||+..+-+ +...+.|..|+.++
T Consensus 149 --relL~~~~Ig~I~GIlnGT~nyil-t~m~~~g~~f~~~l 186 (444)
T 3mtj_A 149 --REGLTANRIEWLAGIINGTSNFIL-SEMRDKGAAFDDVL 186 (444)
T ss_dssp --HTTTTTSCEEEEEEECCHHHHHHH-HHHHHHCCCHHHHH
T ss_pred --HHHHhCCCCceEEEEEcCCccccc-ccCCCCCCCHHHHH
Confidence 0113456666554 477766544 33444566665554
No 141
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.37 E-value=0.21 Score=51.32 Aligned_cols=109 Identities=13% Similarity=-0.021 Sum_probs=66.8
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcC-CeEEEEEeCCCCC------CccccccCceeecccccC-CHHHHhhcCCCccEEEEe
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFD-FLCVAGIINPGAE------GFQKLFFGQEEIAIPVHS-TVEAACAAHPMADVFINF 79 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g-~~~V~gv~~p~~~------~~~~~~~g~~v~G~~~y~-sv~~i~~~~p~vDlavi~ 79 (602)
++++||| |..|. +.++|.+.| ++++ +.+ +... ...+.+ .-.|. .. |+.|+.. +.|+++++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~-~~d-r~~~~~~~~~~~~~~~---~~~g~--~~~s~~e~~~---~aDvVi~a 94 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLA-AYD-LRFNDPAASGALRARA---AELGV--EPLDDVAGIA---CADVVLSL 94 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEE-EEC-GGGGCTTTHHHHHHHH---HHTTC--EEESSGGGGG---GCSEEEEC
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEE-EEe-CCCccccchHHHHHHH---HHCCC--CCCCHHHHHh---cCCEEEEe
Confidence 5688886 33344 778888899 8753 443 3210 000000 01244 56 7777665 37999999
Q ss_pred cCChhhHHHHHHHhhC-CCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 80 SSFRSAAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 80 vp~~~~~~~~~e~~~~-~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
||...... .++.+.. ..-..++|-.++......+++.+..++.|++++.
T Consensus 95 vp~~~~~~-~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d 144 (317)
T 4ezb_A 95 VVGAATKA-VAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVE 144 (317)
T ss_dssp CCGGGHHH-HHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEE
T ss_pred cCCHHHHH-HHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 99986444 4455542 2234566666777777778888888888776543
No 142
>3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica}
Probab=90.51 E-value=0.049 Score=58.08 Aligned_cols=84 Identities=12% Similarity=0.118 Sum_probs=59.8
Q ss_pred HHHhhhc--CCCcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchheeeeecC--C
Q 007482 349 STISDDR--GEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARA--G 424 (602)
Q Consensus 349 t~I~~~~--g~~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~r~~ast--~ 424 (602)
|+|+... ...+.|||+++.||..+. +|+++.|+||+|+.|++++.+.|..-|. .|..-|.. ...+..+. .
T Consensus 45 T~Is~idg~~g~L~YRGy~I~dLa~~~-~fEevayLLl~G~LPt~~el~~f~~~l~---~~~~lp~~--~~~~~~~~p~~ 118 (404)
T 3o8j_A 45 TALCTVGKSGNDLHYRGYDILDLAEHC-EFEEVAHLLIHGKLPTRDELNAYKSKLK---ALRGLPAN--VRTVLEALPAA 118 (404)
T ss_dssp ESSEEECC-CCCEEETTEEHHHHHHHC-CHHHHHHHHHTSSCCCHHHHHHHHHHHH---TTCCCCHH--HHHHHHTSCTT
T ss_pred eeceeeeCCCCEEEECCeEHHHHHhcC-CHHHHHHHHHcCcCCCHHHHHHHHHHHH---HccCCCHH--HHHHHHhCCCC
Confidence 4556654 345889999999999888 9999999999998888888888887664 44444443 23333333 4
Q ss_pred CChHHHHHHhhccC
Q 007482 425 KDLVSSLVSGLLTI 438 (602)
Q Consensus 425 ~~~~~av~agl~a~ 438 (602)
+++-..+.++++++
T Consensus 119 ~hPM~~L~~~vsaL 132 (404)
T 3o8j_A 119 SHPMDVMRTGVSAL 132 (404)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHH
Confidence 66777777777665
No 143
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=90.05 E-value=0.07 Score=54.98 Aligned_cols=94 Identities=9% Similarity=-0.011 Sum_probs=55.4
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccc---------cCceeecccccCCHHHHhhcCCCccEE
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLF---------FGQEEIAIPVHSTVEAACAAHPMADVF 76 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~---------~g~~v~G~~~y~sv~~i~~~~p~vDla 76 (602)
-|++++||| |..|. ...+|.+.|+++. ..+ .... +.+.+ .|.+. ++++..+.++ .. +.|++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~-~~~-r~~~-~~~~l~~~g~~~~~~~~~~-~~~~~~~~~~-~~---~aDvV 84 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVI-LWA-RRKE-IVDLINVSHTSPYVEESKI-TVRATNDLEE-IK---KEDIL 84 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SSHH-HHHHHHHHSCBTTBTTCCC-CSEEESCGGG-CC---TTEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEE-EEe-CCHH-HHHHHHHhCCcccCCCCee-eEEEeCCHHH-hc---CCCEE
Confidence 478999997 44444 7778888898752 232 2111 00000 01111 4566777776 43 47999
Q ss_pred EEecCChhhHHHHHHHhhCCCCcEEEEecCCCCHH
Q 007482 77 INFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEA 111 (602)
Q Consensus 77 vi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~ 111 (602)
+++||+. .+.++++.+.. .=+.+|.++.|+...
T Consensus 85 il~vk~~-~~~~v~~~l~~-~~~~vv~~~nGi~~~ 117 (335)
T 1z82_A 85 VIAIPVQ-YIREHLLRLPV-KPSMVLNLSKGIEIK 117 (335)
T ss_dssp EECSCGG-GHHHHHTTCSS-CCSEEEECCCCCCTT
T ss_pred EEECCHH-HHHHHHHHhCc-CCCEEEEEeCCCCCC
Confidence 9999985 58888887653 223455556688653
No 144
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=89.71 E-value=0.25 Score=48.66 Aligned_cols=92 Identities=12% Similarity=0.006 Sum_probs=56.9
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhH
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAA 86 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~ 86 (602)
.++++||| |..|+ +.+++.+.|+.+ ...+ +... +.+.+ .+-.|+..+.+..++.. ++|++++++|+. ..
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v-~~~~-~~~~-~~~~~--~~~~g~~~~~~~~~~~~---~~D~Vi~~v~~~-~~ 73 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHEL-IISG-SSLE-RSKEI--AEQLALPYAMSHQDLID---QVDLVILGIKPQ-LF 73 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEE-EEEC-SSHH-HHHHH--HHHHTCCBCSSHHHHHH---TCSEEEECSCGG-GH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeE-EEEC-CCHH-HHHHH--HHHcCCEeeCCHHHHHh---cCCEEEEEeCcH-hH
Confidence 46788886 33343 777888888764 3443 3211 11111 01136788999988765 479999999965 57
Q ss_pred HHHHHHhhCCCCcEEEEecCCCCHH
Q 007482 87 ASSMAALKQPTIRVVAIIAEGVPEA 111 (602)
Q Consensus 87 ~~~~e~~~~~gv~~~viis~Gf~E~ 111 (602)
..+++++. +|. .++-.++|++..
T Consensus 74 ~~v~~~l~-~~~-~vv~~~~~~~~~ 96 (259)
T 2ahr_A 74 ETVLKPLH-FKQ-PIISMAAGISLQ 96 (259)
T ss_dssp HHHHTTSC-CCS-CEEECCTTCCHH
T ss_pred HHHHHHhc-cCC-EEEEeCCCCCHH
Confidence 77887765 443 344445788764
No 145
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=89.57 E-value=0.06 Score=56.83 Aligned_cols=85 Identities=12% Similarity=0.136 Sum_probs=58.9
Q ss_pred HHHHhhhcCC--CcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchheeeeec--C
Q 007482 348 ISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTAR--A 423 (602)
Q Consensus 348 ~t~I~~~~g~--~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~r~~as--t 423 (602)
.|+|+...|+ .+.|||+++.||..+. +|+++.|+||+|+-|++++.+.|...|. .|..-+.. ...+..+ .
T Consensus 12 ~t~Is~id~~~G~L~YRGy~i~~La~~~-~fEeva~LLl~G~lP~~~el~~f~~~l~---~~~~lp~~--~~~~~~~~p~ 85 (371)
T 1aj8_A 12 QTNICYIDGKEGKLYYRGYSVEELAELS-TFEEVVYLLWWGKLPSLSELENFKKELA---KSRGLPKE--VIEIMEALPK 85 (371)
T ss_dssp EESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TTCCCCHH--HHHHHHHSCT
T ss_pred eeeCeEEECCCCEEEEcCccHHHHHccC-CHHHHHHHHHCCCCCCHHHHHHHHHHHH---HccCCCHH--HHHHHHhCCC
Confidence 3456666654 4889999999999988 9999999999999999888888887665 44443333 2222222 2
Q ss_pred CCChHHHHHHhhccC
Q 007482 424 GKDLVSSLVSGLLTI 438 (602)
Q Consensus 424 ~~~~~~av~agl~a~ 438 (602)
.+++-..+.++++++
T Consensus 86 ~~hpM~~l~~~v~~l 100 (371)
T 1aj8_A 86 NTHPMGALRTIISYL 100 (371)
T ss_dssp TCCHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHH
Confidence 356666566555554
No 146
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.46 E-value=1.1 Score=43.75 Aligned_cols=87 Identities=10% Similarity=0.038 Sum_probs=57.4
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcC----CeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCC
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFD----FLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g----~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~ 82 (602)
.++++||| |..|. +.+++.+.| +.+ ...+ +... . .|+..+.+..++.. +.|+++++||+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v-~~~~-~~~~---------~-~g~~~~~~~~~~~~---~~D~vi~~v~~ 68 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENL-FYYG-PSKK---------N-TTLNYMSSNEELAR---HCDIIVCAVKP 68 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGE-EEEC-SSCC---------S-SSSEECSCHHHHHH---HCSEEEECSCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeE-EEEe-CCcc---------c-CceEEeCCHHHHHh---cCCEEEEEeCH
Confidence 46799997 33344 777888878 453 3333 3221 1 46777888888665 37999999997
Q ss_pred hhhHHHHHHHhhCC-CCcEEEEecCCCCHH
Q 007482 83 RSAAASSMAALKQP-TIRVVAIIAEGVPEA 111 (602)
Q Consensus 83 ~~~~~~~~e~~~~~-gv~~~viis~Gf~E~ 111 (602)
. .+.++++.+... .-+.++..++|++..
T Consensus 69 ~-~~~~v~~~l~~~l~~~~vv~~~~gi~~~ 97 (262)
T 2rcy_A 69 D-IAGSVLNNIKPYLSSKLLISICGGLNIG 97 (262)
T ss_dssp T-THHHHHHHSGGGCTTCEEEECCSSCCHH
T ss_pred H-HHHHHHHHHHHhcCCCEEEEECCCCCHH
Confidence 6 578888877531 223466678899864
No 147
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=89.44 E-value=0.067 Score=56.59 Aligned_cols=103 Identities=11% Similarity=0.050 Sum_probs=66.7
Q ss_pred HHHHhhhcCC--CcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchheeeeec--C
Q 007482 348 ISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTAR--A 423 (602)
Q Consensus 348 ~t~I~~~~g~--~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~r~~as--t 423 (602)
.|+|+...|+ .+.|||+++.||..+. +|+++.|+||+|+.|++++.+.++..|. +|..-+.. ..++..+ .
T Consensus 16 ~t~Is~id~~~G~L~YRGy~i~dLa~~~-~fEeva~LL~~G~lP~~~el~~f~~~l~---~~~~lp~~--~~~~~~~~p~ 89 (378)
T 1vgm_A 16 TTGLTYIDGINGILRYRGYDINDLVNYA-SYEELIHLMLYGELPNRQQLNQIKGIIN---ESFEVPEQ--VISTIFSMPR 89 (378)
T ss_dssp EESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TCCCCCHH--HHHHHTTSCT
T ss_pred eeeceEEECCCCeEEEcCeeHHHHHhcC-CHHHHHHHHHcCCCCCHHHHHHHHHHHH---HccCCCHH--HHHHHHhCCC
Confidence 3566666654 4889999999999988 9999999999999999888888887655 44443333 1222222 2
Q ss_pred CCChHHHHHHhhccCC---CC---CcChHHHHHHHHHHH
Q 007482 424 GKDLVSSLVSGLLTIG---PR---FGGAIDDAARYFKDA 456 (602)
Q Consensus 424 ~~~~~~av~agl~a~G---p~---hgGa~~~a~~~l~~~ 456 (602)
.+++-..+.+++++++ |. .-...+.+++++..+
T Consensus 90 ~~hpM~~l~~~v~~l~~~~~~~~~~~~~~~~a~~Lia~~ 128 (378)
T 1vgm_A 90 NCDAIGMMETAFGILASIYDPKWNRATNKELAVQIIAKT 128 (378)
T ss_dssp TSCHHHHHHHHHHHHHHHHCCCCCTTTHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHhccCCccCCHHHHHHHHHHHHHHH
Confidence 3566666666665542 21 122344566666543
No 148
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=89.13 E-value=0.81 Score=47.57 Aligned_cols=107 Identities=10% Similarity=-0.035 Sum_probs=48.3
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ +.+++..+|++++ +.+ +... ...+...+.++.|+.. +.|++++++|...
T Consensus 169 l~gktiGIIGlG~IG~~vA~~l~~~G~~V~-~~d-r~~~---------~~~~~~~~~sl~ell~---~aDvVil~vP~t~ 234 (340)
T 4dgs_A 169 PKGKRIGVLGLGQIGRALASRAEAFGMSVR-YWN-RSTL---------SGVDWIAHQSPVDLAR---DSDVLAVCVAASA 234 (340)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EEC-SSCC---------TTSCCEECSSHHHHHH---TCSEEEECC----
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEc-CCcc---------cccCceecCCHHHHHh---cCCEEEEeCCCCH
Confidence 4456888886 44444 7788888999864 444 4221 1123445789999877 4799999999543
Q ss_pred hHHHHH--HHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCee
Q 007482 85 AAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV 127 (602)
Q Consensus 85 ~~~~~~--e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~ri 127 (602)
....++ +.....+-..++|-++--+-.+++.|.+..++..+.-
T Consensus 235 ~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~g 279 (340)
T 4dgs_A 235 ATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAG 279 (340)
T ss_dssp ------CHHHHHHTTTTCEEEECSCC--------------CCSSE
T ss_pred HHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceE
Confidence 333332 2222222233444333224457888888887766543
No 149
>1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1
Probab=88.85 E-value=0.067 Score=56.59 Aligned_cols=103 Identities=13% Similarity=0.134 Sum_probs=66.7
Q ss_pred HHHHhhhcCC--CcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchheeeeec--C
Q 007482 348 ISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTAR--A 423 (602)
Q Consensus 348 ~t~I~~~~g~--~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~r~~as--t 423 (602)
.|+|+...|+ .+.|||+++.||.++. +|+++.|+||+|+.|++++.+.+...|. +|..-+.. + .++..+ .
T Consensus 15 ~t~Is~id~~~G~L~YRGy~i~dLa~~~-~feeva~LL~~G~lPt~~el~~f~~~l~---~~~~lp~~-~-~~~~~~~p~ 88 (377)
T 1o7x_A 15 VTNLTFIDGEKGILRYRGYNIEDLVNYG-SYEETIYLMLYGKLPTKKELNDLKAKLN---EEYEVPQE-V-LDTIYLMPK 88 (377)
T ss_dssp EESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TCCCCCHH-H-HHHHHHSCT
T ss_pred eeeCeEEECCCCEEEECCccHHHHHcCC-CHHHHHHHHHCCCCcCHHHHHHHHHHHH---HccCCCHH-H-HHHHHhCcc
Confidence 3566666654 4889999999999988 9999999999999999888888887655 44443333 1 222222 2
Q ss_pred CCChHHHHHHhhccCC---CCC---cChHHHHHHHHHHH
Q 007482 424 GKDLVSSLVSGLLTIG---PRF---GGAIDDAARYFKDA 456 (602)
Q Consensus 424 ~~~~~~av~agl~a~G---p~h---gGa~~~a~~~l~~~ 456 (602)
.+++-..+.+++++++ |.. -...+.+++++..+
T Consensus 89 ~~hpM~~l~~~v~~l~~~~~~~~~~~~~~~~a~~Lia~~ 127 (377)
T 1o7x_A 89 EADAIGLLEVGTAALASIDKNFKWKENDKEKAISIIAKM 127 (377)
T ss_dssp TSCHHHHHHHHHHHHHHHCCCCCSSSSHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHhhcCCCcCCHHHHHHHHHHHHHHH
Confidence 3566666666665542 321 12344566666543
No 150
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=88.71 E-value=0.31 Score=50.90 Aligned_cols=110 Identities=12% Similarity=0.002 Sum_probs=65.3
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ +.+++..+|++++ +.+ |...... ....|...+.++.|+..+ .|++++++|...
T Consensus 166 l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~-~~d-~~~~~~~-----~~~~g~~~~~~l~ell~~---aDvV~l~~P~t~ 235 (347)
T 1mx3_A 166 IRGETLGIIGLGRVGQAVALRAKAFGFNVL-FYD-PYLSDGV-----ERALGLQRVSTLQDLLFH---SDCVTLHCGLNE 235 (347)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EEC-TTSCTTH-----HHHHTCEECSSHHHHHHH---CSEEEECCCCCT
T ss_pred CCCCEEEEEeECHHHHHHHHHHHHCCCEEE-EEC-CCcchhh-----HhhcCCeecCCHHHHHhc---CCEEEEcCCCCH
Confidence 4567889886 43344 7888888999864 444 4221100 122355556689998763 699999999753
Q ss_pred hHHHHH--HHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~~~~~--e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
....++ +.+...+-..++|-++--+..+++.|.+..++.++.
T Consensus 236 ~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~ 279 (347)
T 1mx3_A 236 HNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIR 279 (347)
T ss_dssp TCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred HHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCc
Confidence 222222 222222233444444433334788888888887766
No 151
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=88.52 E-value=1 Score=46.47 Aligned_cols=75 Identities=13% Similarity=0.026 Sum_probs=50.4
Q ss_pred ecc-cccCCHHHHhhcCCCccEEEEecCChhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHH---HHhCCCe-eE
Q 007482 55 IAI-PVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAY---ARSNNKV-VI 128 (602)
Q Consensus 55 ~G~-~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~---a~~~g~r-ii 128 (602)
.|+ ++|.+.+|++.. +++|+++|++|...-.+.+++++. +|. .++|= .=.....+.++|+++ +++.|+. .+
T Consensus 58 ~g~~~~~~d~~~ll~~-~~iDaV~I~tP~~~H~~~~~~al~-aGk-hVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v 134 (390)
T 4h3v_A 58 LGWSTTETDWRTLLER-DDVQLVDVCTPGDSHAEIAIAALE-AGK-HVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMV 134 (390)
T ss_dssp HTCSEEESCHHHHTTC-TTCSEEEECSCGGGHHHHHHHHHH-TTC-EEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCCcccCCHHHHhcC-CCCCEEEEeCChHHHHHHHHHHHH-cCC-CceeecCcccchhHHHHHHHHHHHHHhcCCceEE
Confidence 354 589999998865 479999999999876777777666 785 44441 113333455667444 7778875 56
Q ss_pred cCCc
Q 007482 129 GPAT 132 (602)
Q Consensus 129 GPNc 132 (602)
|-|.
T Consensus 135 ~~~~ 138 (390)
T 4h3v_A 135 GFTY 138 (390)
T ss_dssp ECGG
T ss_pred Eeee
Confidence 6554
No 152
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.19 E-value=0.36 Score=48.29 Aligned_cols=112 Identities=13% Similarity=0.049 Sum_probs=63.0
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHhc--CCeEEEEEeCCCCCCccccccCceeecc--cccCCHHHHhhcCCCccEEEEecC
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLDF--DFLCVAGIINPGAEGFQKLFFGQEEIAI--PVHSTVEAACAAHPMADVFINFSS 81 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~~--g~~~V~gv~~p~~~~~~~~~~g~~v~G~--~~y~sv~~i~~~~p~vDlavi~vp 81 (602)
+.++++||| |..|. +.+.+.+. ++++ .+.+ +... +.+.+ .-.|. ..+.++.++.. +.|+++++||
T Consensus 5 ~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V-~~~d-~~~~-~~~~~---~~~g~~~~~~~~~~~~~~---~aDvVilavp 75 (290)
T 3b1f_A 5 EEKTIYIAGLGLIGASLALGIKRDHPHYKI-VGYN-RSDR-SRDIA---LERGIVDEATADFKVFAA---LADVIILAVP 75 (290)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEE-EEEC-SSHH-HHHHH---HHTTSCSEEESCTTTTGG---GCSEEEECSC
T ss_pred ccceEEEEeeCHHHHHHHHHHHhCCCCcEE-EEEc-CCHH-HHHHH---HHcCCcccccCCHHHhhc---CCCEEEEcCC
Confidence 346889996 33344 66777776 5554 3444 3211 00111 00233 34566666544 3799999999
Q ss_pred ChhhHHHHHHHhhCC--CCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 82 FRSAAASSMAALKQP--TIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 82 ~~~~~~~~~e~~~~~--gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
+.. ...+++++... +-+.+|+..++......+++.+...+.++|+++
T Consensus 76 ~~~-~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~ 124 (290)
T 3b1f_A 76 IKK-TIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVG 124 (290)
T ss_dssp HHH-HHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEE
T ss_pred HHH-HHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEE
Confidence 875 57788877533 223455555565543445555555444777775
No 153
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=87.87 E-value=0.31 Score=52.35 Aligned_cols=99 Identities=14% Similarity=0.042 Sum_probs=67.1
Q ss_pred CCCCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCC--CCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007482 5 QLFSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGA--EGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 80 (602)
Q Consensus 5 ~l~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~--~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~v 80 (602)
.+|.-++||||| |..|+ ...||.+.|.+++.|.- |+. .+. +-....+-.|.+++ +++|+.+ +.|++++.+
T Consensus 33 ~~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr-~~s~~e~~-~S~~~A~~~Gf~v~-~~~eA~~---~ADvV~~L~ 106 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALR-KEAIAEKR-ASWRKATENGFKVG-TYEELIP---QADLVINLT 106 (491)
T ss_dssp GGGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEEC-HHHHHTTC-HHHHHHHHTTCEEE-EHHHHGG---GCSEEEECS
T ss_pred HHHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeC-CCCccccc-chHHHHHHCCCEec-CHHHHHH---hCCEEEEeC
Confidence 356678999996 56666 89999999999876763 421 000 00111355778887 5888766 479999999
Q ss_pred CChhhHHHHHHHhhC-CCCcEEEEecCCCCH
Q 007482 81 SFRSAAASSMAALKQ-PTIRVVAIIAEGVPE 110 (602)
Q Consensus 81 p~~~~~~~~~e~~~~-~gv~~~viis~Gf~E 110 (602)
|... -..+.+.+.. ..-..++.+|-||..
T Consensus 107 PD~~-q~~vy~~I~p~lk~G~~L~faHGFnI 136 (491)
T 3ulk_A 107 PDKQ-HSDVVRTVQPLMKDGAALGYSHGFNI 136 (491)
T ss_dssp CGGG-HHHHHHHHGGGSCTTCEEEESSCHHH
T ss_pred Chhh-HHHHHHHHHhhCCCCCEEEecCcccc
Confidence 9864 5666666542 234578999999953
No 154
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=87.73 E-value=0.088 Score=55.40 Aligned_cols=103 Identities=17% Similarity=0.109 Sum_probs=69.0
Q ss_pred HHHHhhhcCC--CcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchheeeee--cC
Q 007482 348 ISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTA--RA 423 (602)
Q Consensus 348 ~t~I~~~~g~--~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~r~~a--st 423 (602)
.|+|+...|+ .+.|||+++.||..+. +|+++.|+||+|+.|++++.+.++..|.-+. .-+.. ..++.. ..
T Consensus 12 ~t~Is~id~~~G~L~YRGy~i~dLa~~~-~fEeva~LL~~G~lP~~~el~~f~~~l~~~~---~lp~~--~~~~~~~~p~ 85 (363)
T 2c6x_A 12 ETSISHIDGEKGRLIYRGHHAKDIALNH-SFEEAAYLILFGKLPSTEELQVFKDKLAAER---NLPEH--IERLIQSLPN 85 (363)
T ss_dssp EESSEEEETTTTEEEETTEEHHHHHHHS-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHT---SCCHH--HHHHHHHSCS
T ss_pred eeeCeEEECCCCEEEEcCccHHHHHccC-CHHHHHHHHHCCCCcCHHHHHHHHHHHHHcc---CCCHH--HHHHHHhCcc
Confidence 3456666654 4889999999999988 9999999999999999888888888776543 22222 111222 23
Q ss_pred CCChHHHHHHhhccCCC-C--CcChHHHHHHHHHHH
Q 007482 424 GKDLVSSLVSGLLTIGP-R--FGGAIDDAARYFKDA 456 (602)
Q Consensus 424 ~~~~~~av~agl~a~Gp-~--hgGa~~~a~~~l~~~ 456 (602)
.+++-..+.+++++++. . .-...+.+++++..+
T Consensus 86 ~~hpM~~l~~~v~~l~~~~~~~~~~~~~a~~Lia~~ 121 (363)
T 2c6x_A 86 NMDDMSVLRTVVSALGENTYTFHPKTEEAIRLIAIT 121 (363)
T ss_dssp SSCHHHHHHHHHHHHCCSSCCSSCCHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHhhcCCCCChHHHHHHHHHHHHHH
Confidence 46777777777777643 2 112345566666554
No 155
>1csh_A Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A {Gallus gallus} SCOP: a.103.1.1 PDB: 1amz_A* 1csi_A* 1csr_A* 1css_A* 1al6_A* 6csc_A* 2cts_A* 3enj_A 1cts_A 4cts_A 1csc_A* 2csc_A* 3csc_A* 4csc_A* 5csc_A 5cts_A* 6cts_A* 5csc_B
Probab=87.73 E-value=0.078 Score=57.08 Aligned_cols=90 Identities=11% Similarity=-0.026 Sum_probs=63.4
Q ss_pred HHHHHHhhhcCCC-cccCCCCCcccccCC--------CcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchh
Q 007482 346 HIISTISDDRGEE-PCYAGVPMSSIVEQG--------YGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHN 416 (602)
Q Consensus 346 ~i~t~I~~~~g~~-i~~rg~dL~~li~~~--------~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a 416 (602)
...|+|+...|++ +.|||+++.||.++. .+|++++|+||+|+.|++++.+.++..|.-+. .-+.. +
T Consensus 48 ~~~t~Is~id~~~Gl~YRGy~I~dLa~~~~~~~~~~~~~feev~yLLl~G~LPt~~el~~f~~~l~~~~---~lp~~--v 122 (435)
T 1csh_A 48 GLIYETSVLDPDEGIRFRGFSIPECQKLLPKAGGGEEPLPEGLFWLLVTGQIPTPEQVSWVSKEWAKRA---ALPSH--V 122 (435)
T ss_dssp CCCCCSEEEETTTEEEETTEEHHHHHHHSCBCTTCCSBCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHC---CCCHH--H
T ss_pred eeeeeeeEEcCCCCeeECCccHHHHHhhCcccccCCcCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHcc---CCCHH--H
Confidence 4456677766544 789999999998753 15999999999999999989888888766553 33332 2
Q ss_pred eeeeec--CCCChHHHHHHhhccCCC
Q 007482 417 TIVTAR--AGKDLVSSLVSGLLTIGP 440 (602)
Q Consensus 417 ~r~~as--t~~~~~~av~agl~a~Gp 440 (602)
..+..+ ..++|-..+.+++++++.
T Consensus 123 ~~~i~~~p~~~hPM~~l~~~v~aL~~ 148 (435)
T 1csh_A 123 VTMLDNFPTNLHPMSQLSAAITALNS 148 (435)
T ss_dssp HHHHHHSCTTSCHHHHHHHHHHHGGG
T ss_pred HHHHHhCCccCChHHHHHHHHHHHhh
Confidence 223333 345677777777777754
No 156
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=87.49 E-value=1 Score=45.90 Aligned_cols=105 Identities=8% Similarity=-0.020 Sum_probs=62.1
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+..+++.||| |..|+ +.+++..+|++++ +.+ +.... + +...+.++.++.+ +.|++++++|...
T Consensus 122 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~d-r~~~~--------~--~~~~~~~l~ell~---~aDvV~l~~P~~~ 186 (303)
T 1qp8_A 122 IQGEKVAVLGLGEIGTRVGKILAALGAQVR-GFS-RTPKE--------G--PWRFTNSLEEALR---EARAAVCALPLNK 186 (303)
T ss_dssp CTTCEEEEESCSTHHHHHHHHHHHTTCEEE-EEC-SSCCC--------S--SSCCBSCSHHHHT---TCSEEEECCCCST
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHCCCEEE-EEC-CCccc--------c--CcccCCCHHHHHh---hCCEEEEeCcCch
Confidence 5667899996 44455 7788888999854 444 42210 1 3345678888776 4799999999863
Q ss_pred hHHHHH--HHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~~~~~--e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
....++ +.....+-..++|-++--+-.+++.|.+..++..+.
T Consensus 187 ~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~ 230 (303)
T 1qp8_A 187 HTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQF 230 (303)
T ss_dssp TTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTC
T ss_pred HHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCce
Confidence 222222 122222223344444432333677888888876543
No 157
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=87.28 E-value=0.11 Score=54.95 Aligned_cols=103 Identities=11% Similarity=0.064 Sum_probs=66.2
Q ss_pred HHHHhhhcCC--CcccCCCCCccccc-CCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchheeeeec--
Q 007482 348 ISTISDDRGE--EPCYAGVPMSSIVE-QGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTAR-- 422 (602)
Q Consensus 348 ~t~I~~~~g~--~i~~rg~dL~~li~-~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~r~~as-- 422 (602)
.|+|+...|+ .+.|||+++.||.. +. +|+++.|+||+|+.|++++.+.|...|.-+ ..-+.. ..++..+
T Consensus 18 ~t~Is~id~~~G~L~YRGy~i~dLa~~~~-~fEeva~LLl~G~lPt~~el~~f~~~l~~~---~~lp~~--~~~~~~~~p 91 (385)
T 2ifc_A 18 WTRLTTIDGNKGILRYGGYSVEDIIASGA-QDEEIQYLFLYGNLPTEQELRKYKETVQKG---YKIPDF--VINAIRQLP 91 (385)
T ss_dssp EESSEEEETTTTEEEETTEEHHHHHHTTC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHGG---GCCCHH--HHHHHHTSC
T ss_pred eeeCeEEECCCCEEEECCccHHHHHhcCC-CHHHHHHHHHCCCCcCHHHHHHHHHHHHHc---cCCCHH--HHHHHHhCC
Confidence 4566776664 48899999999998 77 999999999999999988888888766544 332222 1222222
Q ss_pred CCCChHHHHHHhhccCC---CCC----cChHHHHHHHHHHH
Q 007482 423 AGKDLVSSLVSGLLTIG---PRF----GGAIDDAARYFKDA 456 (602)
Q Consensus 423 t~~~~~~av~agl~a~G---p~h----gGa~~~a~~~l~~~ 456 (602)
..+++-..+.+++++++ |.. -...+.+++++..+
T Consensus 92 ~~~hpM~~l~~~v~~l~~~~~~~~~~~~~~~~~a~~Lia~~ 132 (385)
T 2ifc_A 92 RESDAVAMQMAAVAAMAASETKFKWNKDTDRDVAAEMIGRM 132 (385)
T ss_dssp TTSCHHHHHHHHHHHHHHHCTTCCCCTTTHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHHH
Confidence 23566666666655542 321 11234566666543
No 158
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=87.25 E-value=0.095 Score=55.99 Aligned_cols=87 Identities=16% Similarity=0.101 Sum_probs=60.3
Q ss_pred HHHHHhhhcCC--CcccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchheeeeecCC
Q 007482 347 IISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAG 424 (602)
Q Consensus 347 i~t~I~~~~g~--~i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~r~~ast~ 424 (602)
..|+|+...|+ .+.|||+++.||..+. +|+++.|+||+|+.|++++.+.|+..|.-+. .-+.. + ..+..+.+
T Consensus 32 ~~t~Is~idg~~G~L~YRGy~i~dLa~~~-~fEeva~LLl~G~lPt~~el~~f~~~l~~~~---~lp~~-~-~~~~~~~p 105 (409)
T 2ibp_A 32 KSTSISDIDGEKGILWYRGYRIEELARLS-TYEEVSYLILYGRLPTKRELEDYINRMKKYR---ELHPA-T-VEVIRNLA 105 (409)
T ss_dssp EEECSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHT---SCCHH-H-HHHHHHTT
T ss_pred eeeeCeEEECCCCEEEEcCccHHHHHccC-CHHHHHHHHHCCCCcCHHHHHHHHHHHHHcc---CCCHH-H-HHHHHhCC
Confidence 45667776664 4889999999999988 9999999999999999888888888776543 22232 1 11222221
Q ss_pred C-ChHHHHHHhhccCC
Q 007482 425 K-DLVSSLVSGLLTIG 439 (602)
Q Consensus 425 ~-~~~~av~agl~a~G 439 (602)
. +|-..+.+++++++
T Consensus 106 ~~hPM~~l~~~v~aL~ 121 (409)
T 2ibp_A 106 KAHPMFALEAAVAAEG 121 (409)
T ss_dssp TSCHHHHHHHHHHHHH
T ss_pred ccCchHHHHHHHHHHh
Confidence 1 66666666666653
No 159
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=87.06 E-value=0.72 Score=46.89 Aligned_cols=106 Identities=5% Similarity=0.028 Sum_probs=62.3
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ +.+++..+|++++ +.+ +.... ........+++|+.++ .|++++++|...
T Consensus 120 l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~-~~d-r~~~~---------~~~~~~~~~l~ell~~---aDiV~l~~P~t~ 185 (290)
T 3gvx_A 120 LYGKALGILGYGGIGRRVAHLAKAFGMRVI-AYT-RSSVD---------QNVDVISESPADLFRQ---SDFVLIAIPLTD 185 (290)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCEEE-EEC-SSCCC---------TTCSEECSSHHHHHHH---CSEEEECCCCCT
T ss_pred eecchheeeccCchhHHHHHHHHhhCcEEE-EEe-ccccc---------cccccccCChHHHhhc---cCeEEEEeeccc
Confidence 3446888886 43344 7888888999864 444 42211 1113456689998764 699999999633
Q ss_pred hHHHHH--HHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~~~~~--e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
....++ +.....+-..++|-++--+-.+++.|.+..++.++.
T Consensus 186 ~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ 229 (290)
T 3gvx_A 186 KTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDV 229 (290)
T ss_dssp TTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTC
T ss_pred cchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccce
Confidence 222221 222222233344444322333788888888887665
No 160
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=86.85 E-value=0.94 Score=46.31 Aligned_cols=97 Identities=8% Similarity=0.066 Sum_probs=56.9
Q ss_pred CCCCCcEEEEe-eCCcH-HHHHHHhcC----CeEEEEEeCCCCC-CccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007482 6 LFSKTTQALFY-NYKQL-PIQRMLDFD----FLCVAGIINPGAE-GFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 78 (602)
Q Consensus 6 l~~p~s~avv~-g~~~~-~~~~~~~~g----~~~V~gv~~p~~~-~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi 78 (602)
..+.++|+||| |..|. +..+|.+.| +.+ ...+ +... .+.+.+ .-.|+.+..+..++.. +.|++|+
T Consensus 19 ~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V-~v~~-r~~~~~~~~~l---~~~G~~~~~~~~e~~~---~aDvVil 90 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKI-MASS-PDMDLATVSAL---RKMGVKLTPHNKETVQ---HSDVLFL 90 (322)
T ss_dssp ---CCCEEEESCSHHHHHHHHHHHHTTSSCGGGE-EEEC-SCTTSHHHHHH---HHHTCEEESCHHHHHH---HCSEEEE
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceE-EEEC-CCccHHHHHHH---HHcCCEEeCChHHHhc---cCCEEEE
Confidence 45667899997 33343 778888888 564 2333 3221 011111 1236777778877665 3799999
Q ss_pred ecCChhhHHHHHHHhhCC-CC-cEEEEecCCCCHH
Q 007482 79 FSSFRSAAASSMAALKQP-TI-RVVAIIAEGVPEA 111 (602)
Q Consensus 79 ~vp~~~~~~~~~e~~~~~-gv-~~~viis~Gf~E~ 111 (602)
+||+. .+.++++.+... .- +.+|-++.|++..
T Consensus 91 av~~~-~~~~vl~~l~~~l~~~~ivvs~s~gi~~~ 124 (322)
T 2izz_A 91 AVKPH-IIPFILDEIGADIEDRHIVVSCAAGVTIS 124 (322)
T ss_dssp CSCGG-GHHHHHHHHGGGCCTTCEEEECCTTCCHH
T ss_pred EeCHH-HHHHHHHHHHhhcCCCCEEEEeCCCCCHH
Confidence 99975 578888877531 11 2344456788753
No 161
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=86.19 E-value=1.2 Score=46.03 Aligned_cols=66 Identities=17% Similarity=0.134 Sum_probs=43.9
Q ss_pred ccC---CHHHHhhcCCCccEEEEecCCh----hhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE
Q 007482 59 VHS---TVEAACAAHPMADVFINFSSFR----SAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 128 (602)
Q Consensus 59 ~y~---sv~~i~~~~p~vDlavi~vp~~----~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii 128 (602)
.|. +.+++. . +++|++|+++|.. ...+.+.+++. +|.+ +|+-....--..-++|.+.|+++|+++.
T Consensus 72 ~~~~~~d~~~ll-~-~~iDvVv~~t~~~~~~~~~~~~~~~AL~-aGkh-VvtanK~pla~~~~eL~~~A~~~gv~~~ 144 (331)
T 3c8m_A 72 LEYESISASEAL-A-RDFDIVVDATPASADGKKELAFYKETFE-NGKD-VVTANKSGLANFWPEIMEYARSNNRRIR 144 (331)
T ss_dssp CCSEECCHHHHH-H-SSCSEEEECSCCCSSSHHHHHHHHHHHH-TTCE-EEECCCHHHHHHHHHHHHHHHHHTCCEE
T ss_pred ccCCCCCHHHHh-C-CCCCEEEECCCCCCccchHHHHHHHHHH-CCCe-EEecCchhhHHHHHHHHHHHHHcCCEEE
Confidence 565 899987 4 3699999999984 33445556555 7765 4432222111256889999999998764
No 162
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=85.94 E-value=0.61 Score=45.97 Aligned_cols=94 Identities=11% Similarity=0.060 Sum_probs=57.2
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
..++++||| |..|. +.+.+.+.|++.|...+ +... +.+.+ .+-.|+.++.++.++.+ +.|++++++|...
T Consensus 9 ~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~-~~~~-~~~~~--~~~~g~~~~~~~~~~~~---~~Dvvi~av~~~~- 80 (266)
T 3d1l_A 9 EDTPIVLIGAGNLATNLAKALYRKGFRIVQVYS-RTEE-SAREL--AQKVEAEYTTDLAEVNP---YAKLYIVSLKDSA- 80 (266)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHHTCCEEEEEC-SSHH-HHHHH--HHHTTCEEESCGGGSCS---CCSEEEECCCHHH-
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEe-CCHH-HHHHH--HHHcCCceeCCHHHHhc---CCCEEEEecCHHH-
Confidence 356899996 33333 77778788888554554 3211 00111 01126777888877654 4899999999874
Q ss_pred HHHHHHHhhCCCC---cEEEEecCCCCH
Q 007482 86 AASSMAALKQPTI---RVVAIIAEGVPE 110 (602)
Q Consensus 86 ~~~~~e~~~~~gv---~~~viis~Gf~E 110 (602)
..++++.+.. .+ +.++-+++|++.
T Consensus 81 ~~~v~~~l~~-~~~~~~ivv~~s~~~~~ 107 (266)
T 3d1l_A 81 FAELLQGIVE-GKREEALMVHTAGSIPM 107 (266)
T ss_dssp HHHHHHHHHT-TCCTTCEEEECCTTSCG
T ss_pred HHHHHHHHHh-hcCCCcEEEECCCCCch
Confidence 6778887763 22 234445667764
No 163
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=85.47 E-value=6.3 Score=39.56 Aligned_cols=84 Identities=13% Similarity=0.010 Sum_probs=52.4
Q ss_pred CcEEEEeeCC--cH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhH
Q 007482 10 TTQALFYNYK--QL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAA 86 (602)
Q Consensus 10 ~s~avv~g~~--~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~ 86 (602)
++++||||.+ |. +.+.+.+.|++++ .++ +... .+..++.. +.|++|++||+.. +
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~-~~~-~~~~-----------------~~~~~~~~---~aDvVilavp~~~-~ 78 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPIS-ILD-REDW-----------------AVAESILA---NADVVIVSVPINL-T 78 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEE-EEC-TTCG-----------------GGHHHHHT---TCSEEEECSCGGG-H
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEE-EEE-CCcc-----------------cCHHHHhc---CCCEEEEeCCHHH-H
Confidence 3789997333 33 7778888888752 343 2211 14556554 4799999999975 7
Q ss_pred HHHHHHhhC-CCCcEEEEecCCCCHHHHHHH
Q 007482 87 ASSMAALKQ-PTIRVVAIIAEGVPEADTKQL 116 (602)
Q Consensus 87 ~~~~e~~~~-~gv~~~viis~Gf~E~~~~~l 116 (602)
..+++++.. ..-..+|+..++.+....+++
T Consensus 79 ~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~ 109 (298)
T 2pv7_A 79 LETIERLKPYLTENMLLADLTSVKREPLAKM 109 (298)
T ss_dssp HHHHHHHGGGCCTTSEEEECCSCCHHHHHHH
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCcHHHHHH
Confidence 888887753 222346666677775444444
No 164
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=85.24 E-value=1.7 Score=44.48 Aligned_cols=107 Identities=10% Similarity=-0.012 Sum_probs=60.4
Q ss_pred CcEEEEe-eCCc-HHHHHHHhcCC--eEEEEEeCCCCCCccccccCceeecc--cccCCHHH-HhhcCCCccEEEEecCC
Q 007482 10 TTQALFY-NYKQ-LPIQRMLDFDF--LCVAGIINPGAEGFQKLFFGQEEIAI--PVHSTVEA-ACAAHPMADVFINFSSF 82 (602)
Q Consensus 10 ~s~avv~-g~~~-~~~~~~~~~g~--~~V~gv~~p~~~~~~~~~~g~~v~G~--~~y~sv~~-i~~~~p~vDlavi~vp~ 82 (602)
++++||| |..| .+.+.+.+.|+ ++ .+.+ +.... .+.. .-.|. ..+.++++ +.. +.|++|++||.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V-~~~d-r~~~~-~~~a---~~~G~~~~~~~~~~~~~~~---~aDvVilavp~ 104 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKI-YGYD-INPES-ISKA---VDLGIIDEGTTSIAKVEDF---SPDFVMLSSPV 104 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEE-EEEC-SCHHH-HHHH---HHTTSCSEEESCTTGGGGG---CCSEEEECSCG
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEE-EEEE-CCHHH-HHHH---HHCCCcchhcCCHHHHhhc---cCCEEEEeCCH
Confidence 5788886 3333 37888888998 54 4554 42210 0000 01233 34567777 554 47999999999
Q ss_pred hhhHHHHHHHhhC-CCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 83 RSAAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 83 ~~~~~~~~e~~~~-~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
.. ...+++++.. ..-..+|+-.++.+....+++.+...+ +++|
T Consensus 105 ~~-~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~---~~v~ 148 (314)
T 3ggo_A 105 RT-FREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK---RFVG 148 (314)
T ss_dssp GG-HHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG---GEEC
T ss_pred HH-HHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC---CEEe
Confidence 75 6677776653 233445555556654444444444322 5555
No 165
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=84.99 E-value=1.3 Score=46.27 Aligned_cols=98 Identities=9% Similarity=-0.045 Sum_probs=54.5
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeC-CCC------CCcccccc-Ccee-ecccccCCHHHHhhcCCCccEEE
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDFLCVAGIIN-PGA------EGFQKLFF-GQEE-IAIPVHSTVEAACAAHPMADVFI 77 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~-p~~------~~~~~~~~-g~~v-~G~~~y~sv~~i~~~~p~vDlav 77 (602)
+++++||| |.-|. ....|.+.|+++. .... |.. .+....|. |.++ .++.+..+++++.. +.|++|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~-l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~---~aDvVi 104 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVR-LWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLE---GVTDIL 104 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEE-EECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHT---TCCEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHh---cCCEEE
Confidence 46799997 33344 6677777888752 2321 210 00000011 1111 12445677877655 479999
Q ss_pred EecCChhhHHHHHHHhhCC-C-CcEEEEecCCCCHH
Q 007482 78 NFSSFRSAAASSMAALKQP-T-IRVVAIIAEGVPEA 111 (602)
Q Consensus 78 i~vp~~~~~~~~~e~~~~~-g-v~~~viis~Gf~E~ 111 (602)
++||.. .+.++++.+... . =..+|.++.|+...
T Consensus 105 laVp~~-~~~~vl~~i~~~l~~~~ivvs~~kGi~~~ 139 (356)
T 3k96_A 105 IVVPSF-AFHEVITRMKPLIDAKTRIAWGTKGLAKG 139 (356)
T ss_dssp ECCCHH-HHHHHHHHHGGGCCTTCEEEECCCSCBTT
T ss_pred ECCCHH-HHHHHHHHHHHhcCCCCEEEEEeCCCCcC
Confidence 999986 478888877631 1 12355557788653
No 166
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=84.85 E-value=1.8 Score=42.46 Aligned_cols=102 Identities=9% Similarity=0.012 Sum_probs=57.6
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCC-ccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhH
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEG-FQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAA 86 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~-~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~ 86 (602)
++++||| |..|. +.++|.+.|++++ ..+ +.+.. ..+.+. -.|+. .+..|+.. +.|+++++||+....
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~-~~~-~~~~~~~~~~~~---~~g~~--~~~~~~~~---~aDvvi~~v~~~~~~ 70 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVV-TSL-EGRSPSTIERAR---TVGVT--ETSEEDVY---SCPVVISAVTPGVAL 70 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEE-ECC-TTCCHHHHHHHH---HHTCE--ECCHHHHH---TSSEEEECSCGGGHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEE-EeC-CccCHHHHHHHH---HCCCc--CCHHHHHh---cCCEEEEECCCHHHH
Confidence 3688886 33344 7788888899853 333 32110 111110 02444 67777655 479999999997545
Q ss_pred HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhC
Q 007482 87 ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSN 123 (602)
Q Consensus 87 ~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~ 123 (602)
..+ +.+.. ..+.++|-.++......+++.+...+.
T Consensus 71 ~~~-~~~~~-~~~~~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 71 GAA-RRAGR-HVRGIYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp HHH-HHHHT-TCCSEEEECSCCCHHHHHHHHHHCSSS
T ss_pred HHH-HHHHH-hcCcEEEEccCCCHHHHHHHHHHHhhC
Confidence 554 55543 233255555677655555666655443
No 167
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=84.69 E-value=0.26 Score=48.49 Aligned_cols=89 Identities=11% Similarity=0.103 Sum_probs=52.3
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcC-CeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhH
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFD-FLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAA 86 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g-~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~ 86 (602)
++++||| |..|. +.++|.+.| +.+ ...+ +... +.+.+ .+-.|+..+.+..++. +.|+++++||+ ..+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v-~~~~-r~~~-~~~~~--~~~~g~~~~~~~~~~~----~~D~vi~~v~~-~~~ 70 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRI-YIAN-RGAE-KRERL--EKELGVETSATLPELH----SDDVLILAVKP-QDM 70 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEE-EEEC-SSHH-HHHHH--HHHTCCEEESSCCCCC----TTSEEEECSCH-HHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeE-EEEC-CCHH-HHHHH--HHhcCCEEeCCHHHHh----cCCEEEEEeCc-hhH
Confidence 3688886 33343 777888888 764 2333 3211 11111 0112566677766643 37999999995 457
Q ss_pred HHHHHHhhCCCCcEEEEe-cCCCCH
Q 007482 87 ASSMAALKQPTIRVVAII-AEGVPE 110 (602)
Q Consensus 87 ~~~~e~~~~~gv~~~vii-s~Gf~E 110 (602)
..+++.+.. . +.+|+- ++|++.
T Consensus 71 ~~v~~~l~~-~-~~ivv~~~~g~~~ 93 (263)
T 1yqg_A 71 EAACKNIRT-N-GALVLSVAAGLSV 93 (263)
T ss_dssp HHHHTTCCC-T-TCEEEECCTTCCH
T ss_pred HHHHHHhcc-C-CCEEEEecCCCCH
Confidence 788877754 4 444444 488885
No 168
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=84.51 E-value=2.5 Score=43.62 Aligned_cols=147 Identities=13% Similarity=0.015 Sum_probs=79.7
Q ss_pred CHHHHhhcCCCccEEEEecCChhh----HHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCcccccc
Q 007482 62 TVEAACAAHPMADVFINFSSFRSA----AASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQ 137 (602)
Q Consensus 62 sv~~i~~~~p~vDlavi~vp~~~~----~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~~ 137 (602)
+..|+... +++|++|.++|.... .+.+.+++. +|.+ +|.-.-+.-...-++|.++|+++|+++.=.-+.|--.
T Consensus 73 d~~e~l~~-~~iDvVVe~T~~~~~~~pa~~~~~~aL~-aGkh-VVtaNK~~la~~~~eL~~lA~~~g~~~~~Ea~vg~gi 149 (325)
T 3ing_A 73 SGPEDLMG-EAADLLVDCTPASRDGVREYSLYRMAFE-SGMN-VVTANKSGLANKWHDIMDSANQNSKYIRYEATVAGGV 149 (325)
T ss_dssp CSGGGGTT-SCCSEEEECCCCCSSSHHHHHHHHHHHH-TTCE-EEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTTS
T ss_pred CHHHHhcC-CCCCEEEECCCCccccchHHHHHHHHHH-CCCe-EEEcCchhHHHHHHHHHHHHHHcCCeEEEEeeecccC
Confidence 55666654 469999999987422 244555554 7876 3332222212356899999999999875443333333
Q ss_pred cCcccccccCCcccccccccCCCCCcEEEEe--cChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCC
Q 007482 138 AGAFKIGDTAGTIDNIIHCKLYRPGSVGFVS--KSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIP 215 (602)
Q Consensus 138 ~~~~~l~~~~~~~~~~~p~~~~~~G~valvS--QSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp 215 (602)
|-...+ . ..+..+.|.-|. -||+..+-+-.+ +.|..|+.+ +..+.-+-|-+.||
T Consensus 150 Pii~~l-----------~-~~l~g~~I~~i~Gi~nGT~nyil~~m--~~g~~f~~~----------l~~Aq~~GyaE~DP 205 (325)
T 3ing_A 150 PLFSVL-----------D-YSILPSKVKRFRGIVSSTINYVIRNM--ANGRSLRDV----------VDDAIKKGIAESNP 205 (325)
T ss_dssp CCHHHH-----------H-HTCTTCCEEEEEEECCHHHHHHHHHH--HTTCCHHHH----------HHHHHHHTCSCSST
T ss_pred HHHHHH-----------H-HHhhCCCeeEEEEEEEeeeeEEeecc--cCCCCHHHH----------HHHHHHcCCCCCCc
Confidence 332111 0 112456676664 688875554443 444444332 12223333555577
Q ss_pred CccEEEEEEecCCCcHHHHHHHHHhc
Q 007482 216 QVKMMVVLGELGGRDEYSLVEALKQG 241 (602)
Q Consensus 216 ~t~~I~ly~E~g~~~~~~f~~~~r~~ 241 (602)
.-.+ | |..-.+|++=.++.+
T Consensus 206 ~~Dv-----~-G~D~a~Kl~ILa~~~ 225 (325)
T 3ing_A 206 QDDL-----N-GLDAARKSVILVNHI 225 (325)
T ss_dssp HHHH-----T-THHHHHHHHHHHHHH
T ss_pred cccc-----C-ChhHHHHHHHHHHHH
Confidence 6443 4 555556666666654
No 169
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=84.47 E-value=0.66 Score=45.38 Aligned_cols=92 Identities=15% Similarity=0.095 Sum_probs=55.8
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCC----eEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDF----LCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~----~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
+++++|| |..|. +.+++.+.|+ ++ ...+ +... +.+.+ .+-.|+..+.+..|+.+. .|+++++||+.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V-~~~~-r~~~-~~~~~--~~~~g~~~~~~~~e~~~~---aDvVilav~~~ 74 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQI-ICSD-LNTA-NLKNA--SEKYGLTTTTDNNEVAKN---ADILILSIKPD 74 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGE-EEEC-SCHH-HHHHH--HHHHCCEECSCHHHHHHH---CSEEEECSCTT
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeE-EEEe-CCHH-HHHHH--HHHhCCEEeCChHHHHHh---CCEEEEEeCHH
Confidence 5789896 33344 8888889887 54 3343 3221 11111 012377888999887663 79999999886
Q ss_pred hhHHHHHHHhhCCCC--cEEEE-ecCCCCHH
Q 007482 84 SAAASSMAALKQPTI--RVVAI-IAEGVPEA 111 (602)
Q Consensus 84 ~~~~~~~e~~~~~gv--~~~vi-is~Gf~E~ 111 (602)
.+.++++++.. .. ..++| +++|++..
T Consensus 75 -~~~~v~~~l~~-~l~~~~~vvs~~~gi~~~ 103 (247)
T 3gt0_A 75 -LYASIINEIKE-IIKNDAIIVTIAAGKSIE 103 (247)
T ss_dssp -THHHHC---CC-SSCTTCEEEECSCCSCHH
T ss_pred -HHHHHHHHHHh-hcCCCCEEEEecCCCCHH
Confidence 47888887763 22 22444 67899854
No 170
>3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis}
Probab=84.44 E-value=0.19 Score=53.82 Aligned_cols=103 Identities=14% Similarity=0.064 Sum_probs=68.0
Q ss_pred HHHHhhhcCCC--cccCCCCCcccccCCCcHHHHHHHhhhCCCCchhHHHHHHHHHHHhcCCCCCCccchheeeeecC--
Q 007482 348 ISTISDDRGEE--PCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARA-- 423 (602)
Q Consensus 348 ~t~I~~~~g~~--i~~rg~dL~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~Lvl~aDHg~~~st~~a~r~~ast-- 423 (602)
.|+|+...|+. +.|||+++.||..+. +|+++.|+||+|+.|++++.+.|..-|.-+ ..-+.. ..++..+.
T Consensus 62 ~s~is~iDg~~G~L~YRGy~I~dLa~~~-~feevayLLl~G~LPt~~el~~f~~~l~~~---~~lp~~--~~~~i~~~p~ 135 (427)
T 3msu_A 62 ESKITYIDGGKGVLLHRGYPIEEWTQKS-NYRTLCYALIYGELPTDEQVKSFRQEIINK---MPVCEH--VKAAIAAMPQ 135 (427)
T ss_dssp EESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHH---CCCCHH--HHHHHHHSCT
T ss_pred EEEeeEEeCCCCEEEECCeEHHHHhccC-CHHHHHHHHHcCcCCCHHHHHHHHHHHHHc---cCCCHH--HHHHHHhCCC
Confidence 34566655543 679999999999888 999999999999999888888888876544 333333 33344333
Q ss_pred CCChHHHHHHhhccCCCC------CcChHHHHHHHHHHH
Q 007482 424 GKDLVSSLVSGLLTIGPR------FGGAIDDAARYFKDA 456 (602)
Q Consensus 424 ~~~~~~av~agl~a~Gp~------hgGa~~~a~~~l~~~ 456 (602)
.++|-..+.+++++++.. .-...+.+++++..+
T Consensus 136 ~~hPM~~L~~~v~aL~~~~~~~~~~~~~~~~a~rLiAk~ 174 (427)
T 3msu_A 136 HTHPMSSLIAGVNVLAAEHIHNGQKESQDEVAKNIVAKI 174 (427)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHH
Confidence 356777777777665421 112334566666543
No 171
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=84.18 E-value=1 Score=47.86 Aligned_cols=104 Identities=10% Similarity=-0.089 Sum_probs=63.9
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ +.+++..+|++++ +.+ |... ....+...+.|++|+..+ .|++++++|...
T Consensus 143 l~gktlGiIGlG~IG~~vA~~l~~~G~~V~-~~d-~~~~--------~~~~~~~~~~~l~ell~~---aDvV~l~~P~t~ 209 (404)
T 1sc6_A 143 ARGKKLGIIGYGHIGTQLGILAESLGMYVY-FYD-IENK--------LPLGNATQVQHLSDLLNM---SDVVSLHVPENP 209 (404)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SSCC--------CCCTTCEECSCHHHHHHH---CSEEEECCCSST
T ss_pred cCCCEEEEEeECHHHHHHHHHHHHCCCEEE-EEc-CCch--------hccCCceecCCHHHHHhc---CCEEEEccCCCh
Confidence 4556888886 44444 7778888999864 554 5322 112234556689998874 699999999853
Q ss_pred hH-----HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~-----~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
.. ...++.+. . ..++|-++--+-.+++.|.+..++..+.
T Consensus 210 ~t~~li~~~~l~~mk-~--ga~lIN~aRg~~vd~~aL~~aL~~g~i~ 253 (404)
T 1sc6_A 210 STKNMMGAKEISLMK-P--GSLLINASRGTVVDIPALADALASKHLA 253 (404)
T ss_dssp TTTTCBCHHHHHHSC-T--TEEEEECSCSSSBCHHHHHHHHHTTSEE
T ss_pred HHHHHhhHHHHhhcC-C--CeEEEECCCChHHhHHHHHHHHHcCCcc
Confidence 22 23444443 2 3444444432333778888888876544
No 172
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=84.13 E-value=10 Score=37.57 Aligned_cols=88 Identities=8% Similarity=-0.013 Sum_probs=50.8
Q ss_pred CcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccccCce--eecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 10 TTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQE--EIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 10 ~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~--v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
+++.|. |.+|. +++.|++.|++++.-...+... + +.+-+ ...+. ..++.++.+ ++|.+|-+....
T Consensus 3 ~~vlVt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~-~~~~~~~~~Dl~-~~~~~~~~~---~~d~Vih~a~~~ 73 (311)
T 3m2p_A 3 LKIAVT-GGTGFLGQYVVESIKNDGNTPIILTRSIGNK---A-INDYEYRVSDYT-LEDLINQLN---DVDAVVHLAATR 73 (311)
T ss_dssp CEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTT---TCSEEEECCCCC
T ss_pred CEEEEE-CCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc---c-CCceEEEEcccc-HHHHHHhhc---CCCEEEEccccC
Confidence 445555 54443 7888888999864333212111 1 10111 12333 455666654 489988776432
Q ss_pred h-------------hHHHHHHHhhCCCCcEEEEecC
Q 007482 84 S-------------AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 84 ~-------------~~~~~~e~~~~~gv~~~viis~ 106 (602)
. ....++++|.+.|++.+|.+|+
T Consensus 74 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 74 GSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp CSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 1 1256889999899998888886
No 173
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=83.94 E-value=0.95 Score=46.80 Aligned_cols=104 Identities=13% Similarity=0.047 Sum_probs=62.4
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ ..+++..+|++++ +.+ |.... .. .+ + -.|.+++++... .|++++++|...
T Consensus 143 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d-~~~~~---~~--~~--~-~~~~~l~ell~~---aDvV~~~~P~~~ 209 (333)
T 1dxy_A 143 LGQQTVGVMGTGHIGQVAIKLFKGFGAKVI-AYD-PYPMK---GD--HP--D-FDYVSLEDLFKQ---SDVIDLHVPGIE 209 (333)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SSCCS---SC--CT--T-CEECCHHHHHHH---CSEEEECCCCCG
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EEC-CCcch---hh--Hh--c-cccCCHHHHHhc---CCEEEEcCCCch
Confidence 4456888886 43344 7788888999864 444 42221 01 11 1 235689888763 699999999753
Q ss_pred hH-----HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~-----~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
.. ...++.+. . ..++|-++--+-.+++.|.+..++.++.
T Consensus 210 ~t~~li~~~~l~~mk-~--ga~lIn~srg~~vd~~aL~~aL~~g~i~ 253 (333)
T 1dxy_A 210 QNTHIINEAAFNLMK-P--GAIVINTARPNLIDTQAMLSNLKSGKLA 253 (333)
T ss_dssp GGTTSBCHHHHHHSC-T--TEEEEECSCTTSBCHHHHHHHHHTTSEE
T ss_pred hHHHHhCHHHHhhCC-C--CcEEEECCCCcccCHHHHHHHHHhCCcc
Confidence 22 23455554 3 3444444332334788888888876654
No 174
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=83.65 E-value=1 Score=46.44 Aligned_cols=109 Identities=8% Similarity=0.009 Sum_probs=62.4
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ +.+++..+|++++ +.+ +... .. ....+...+.+++|+.. +.|++++++|...
T Consensus 138 l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~-~~d-r~~~-~~-----~~~~~~~~~~~l~ell~---~aDvV~l~lPlt~ 206 (324)
T 3hg7_A 138 LKGRTLLILGTGSIGQHIAHTGKHFGMKVL-GVS-RSGR-ER-----AGFDQVYQLPALNKMLA---QADVIVSVLPATR 206 (324)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SSCC-CC-----TTCSEEECGGGHHHHHH---TCSEEEECCCCCS
T ss_pred cccceEEEEEECHHHHHHHHHHHhCCCEEE-EEc-CChH-Hh-----hhhhcccccCCHHHHHh---hCCEEEEeCCCCH
Confidence 4456888886 44444 7888888999864 444 3211 01 11122234678999876 4799999999643
Q ss_pred hHHHHH--HHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~~~~~--e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
....++ +.....+-..++|-++--+-.+++.|.+..++..++
T Consensus 207 ~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 250 (324)
T 3hg7_A 207 ETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLG 250 (324)
T ss_dssp SSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSS
T ss_pred HHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCce
Confidence 223322 112222223344433322223788888888887664
No 175
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=83.16 E-value=1.7 Score=46.64 Aligned_cols=108 Identities=12% Similarity=0.038 Sum_probs=60.9
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCcccccc-C------ce--------eecccccCCHHHHhhcC
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFF-G------QE--------EIAIPVHSTVEAACAAH 70 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~-g------~~--------v~G~~~y~sv~~i~~~~ 70 (602)
.-++|+||| |..|. ....+.+ |++++ +++ .... +.+.+. | .. ..++.+-.+++++..
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~-~~D-~~~~-~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~-- 108 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVV-ALD-IVQA-KVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR-- 108 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEE-EEC-SCHH-HHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT--
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEE-EEe-cCHH-HhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh--
Confidence 346889996 44455 4445555 88853 444 2111 000000 0 00 124566677777665
Q ss_pred CCccEEEEecCChh----------hHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHh
Q 007482 71 PMADVFINFSSFRS----------AAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARS 122 (602)
Q Consensus 71 p~vDlavi~vp~~~----------~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~ 122 (602)
+.|+++++||... .+..+.+.+.+..-..+||..|.++....+++.+...+
T Consensus 109 -~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~l~~g~iVV~~STv~pgtt~~l~~~l~~ 169 (432)
T 3pid_A 109 -NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRDIKERLGI 169 (432)
T ss_dssp -TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHHHCTTSEEEECSCCCTTHHHHHHHHHTC
T ss_pred -CCCEEEEeCCCccccccccccHHHHHHHHHHHHhcCCCcEEEEeCCCChHHHHHHHHHHhh
Confidence 4799999999862 34555555443233457777888877666677665544
No 176
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=82.81 E-value=4 Score=38.96 Aligned_cols=86 Identities=8% Similarity=-0.066 Sum_probs=55.9
Q ss_pred CcEEEEeeCCcH---HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhh--cCCCccEEEEecCChh
Q 007482 10 TTQALFYNYKQL---PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACA--AHPMADVFINFSSFRS 84 (602)
Q Consensus 10 ~s~avv~g~~~~---~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~--~~p~vDlavi~vp~~~ 84 (602)
+.++|+ |+++. .+..+.+.+|+.++-++ ..... .++.|+|++.+.+++.. +. .+|.+++++|...
T Consensus 13 k~v~Ii-GAGg~g~~v~~~l~~~~~~~vgfiD-d~~~~-------~~~~g~~Vlg~~~~~~~~~~~-~~~~v~iAIg~~~ 82 (220)
T 4ea9_A 13 GGVVII-GGGGHAKVVIESLRACGETVAAIVD-ADPTR-------RAVLGVPVVGDDLALPMLREQ-GLSRLFVAIGDNR 82 (220)
T ss_dssp SCEEEE-CCSHHHHHHHHHHHHTTCCEEEEEC-SCC----------CBTTBCEEESGGGHHHHHHT-TCCEEEECCCCHH
T ss_pred CCEEEE-cCCHHHHHHHHHHHhCCCEEEEEEe-CCccc-------CcCCCeeEECCHHHHHHhhcc-cccEEEEecCCHH
Confidence 345555 65544 55666668898876655 32211 24788999987665432 11 3678899999877
Q ss_pred hHHHHHHHhhCCCCcEEEEec
Q 007482 85 AAASSMAALKQPTIRVVAIIA 105 (602)
Q Consensus 85 ~~~~~~e~~~~~gv~~~viis 105 (602)
.-..+.+.|.+.|++...++.
T Consensus 83 ~R~~i~~~l~~~g~~~~~~i~ 103 (220)
T 4ea9_A 83 LRQKLGRKARDHGFSLVNAIH 103 (220)
T ss_dssp HHHHHHHHHHHTTCEECCEEC
T ss_pred HHHHHHHHHHhcCCCcCCcCC
Confidence 667888888888887665554
No 177
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=82.14 E-value=1 Score=46.49 Aligned_cols=104 Identities=9% Similarity=0.002 Sum_probs=61.5
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ ..+++..+|++++ +.+ +.... .+ .+ + -.|.++.++.++ .|++++++|...
T Consensus 144 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d-~~~~~---~~--~~--~-~~~~~l~ell~~---aDvV~~~~p~t~ 210 (331)
T 1xdw_A 144 VRNCTVGVVGLGRIGRVAAQIFHGMGATVI-GED-VFEIK---GI--ED--Y-CTQVSLDEVLEK---SDIITIHAPYIK 210 (331)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SSCCC---SC--TT--T-CEECCHHHHHHH---CSEEEECCCCCT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EEC-CCccH---HH--Hh--c-cccCCHHHHHhh---CCEEEEecCCch
Confidence 4556888886 43344 7788888999864 444 42211 01 11 1 235689888763 699999999742
Q ss_pred hH-----HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~-----~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
.. ...++.+. -..++|-++--+-.+++.|.+..++.+++
T Consensus 211 ~t~~li~~~~l~~mk---~ga~lin~srg~~vd~~aL~~aL~~g~i~ 254 (331)
T 1xdw_A 211 ENGAVVTRDFLKKMK---DGAILVNCARGQLVDTEAVIEAVESGKLG 254 (331)
T ss_dssp TTCCSBCHHHHHTSC---TTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HHHHHhCHHHHhhCC---CCcEEEECCCcccccHHHHHHHHHhCCce
Confidence 22 23444443 23444444422223788888888887655
No 178
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=81.95 E-value=1.5 Score=45.17 Aligned_cols=109 Identities=10% Similarity=0.081 Sum_probs=62.3
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ +.+++..+|++++ +.+ +.... .+ .....-.+.+++|+..+ .|++++++|...
T Consensus 135 l~gktvGIiGlG~IG~~vA~~l~~~G~~V~-~~d-r~~~~-~~-----~~~~~~~~~~l~ell~~---aDvV~l~lPlt~ 203 (324)
T 3evt_A 135 LTGQQLLIYGTGQIGQSLAAKASALGMHVI-GVN-TTGHP-AD-----HFHETVAFTATADALAT---ANFIVNALPLTP 203 (324)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEE-SSCCC-CT-----TCSEEEEGGGCHHHHHH---CSEEEECCCCCG
T ss_pred ccCCeEEEECcCHHHHHHHHHHHhCCCEEE-EEC-CCcch-hH-----hHhhccccCCHHHHHhh---CCEEEEcCCCch
Confidence 4556889886 44444 7788888999864 454 42210 00 11111235688888764 699999999643
Q ss_pred hHH-----HHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 85 AAA-----SSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 85 ~~~-----~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
... ..++.+. -..++|-++--+-.+++.|.+..++..++-.|
T Consensus 204 ~t~~li~~~~l~~mk---~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~ 250 (324)
T 3evt_A 204 TTHHLFSTELFQQTK---QQPMLINIGRGPAVDTTALMTALDHHQLSMAA 250 (324)
T ss_dssp GGTTCBSHHHHHTCC---SCCEEEECSCGGGBCHHHHHHHHHTTSCSEEE
T ss_pred HHHHhcCHHHHhcCC---CCCEEEEcCCChhhhHHHHHHHHHhCCceEEE
Confidence 222 2333332 23344433322223788888888887665433
No 179
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=81.87 E-value=1.1 Score=46.67 Aligned_cols=103 Identities=11% Similarity=-0.005 Sum_probs=60.8
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
.-+++.||| |..|+ +.+.+..+|++++ +.+ |.... +..+.-.|.+++++..+ .|++++++|....
T Consensus 147 ~gktvgIiGlG~IG~~vA~~l~~~G~~V~-~~d-~~~~~--------~~~~~~~~~~l~ell~~---aDvV~l~~Plt~~ 213 (343)
T 2yq5_A 147 YNLTVGLIGVGHIGSAVAEIFSAMGAKVI-AYD-VAYNP--------EFEPFLTYTDFDTVLKE---ADIVSLHTPLFPS 213 (343)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SSCCG--------GGTTTCEECCHHHHHHH---CSEEEECCCCCTT
T ss_pred CCCeEEEEecCHHHHHHHHHHhhCCCEEE-EEC-CChhh--------hhhccccccCHHHHHhc---CCEEEEcCCCCHH
Confidence 345888886 44444 7788888999864 454 42211 11112345599998874 6999999995321
Q ss_pred H-----HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 86 A-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 86 ~-----~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
. ...++.+. . ..++|=++--+-.+++.|.+..++..+.
T Consensus 214 t~~li~~~~l~~mk-~--gailIN~aRg~~vd~~aL~~aL~~g~i~ 256 (343)
T 2yq5_A 214 TENMIGEKQLKEMK-K--SAYLINCARGELVDTGALIKALQDGEIA 256 (343)
T ss_dssp TTTCBCHHHHHHSC-T--TCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred HHHHhhHHHHhhCC-C--CcEEEECCCChhhhHHHHHHHHHcCCCc
Confidence 1 23444443 2 3344434322233788888888877654
No 180
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=81.41 E-value=1 Score=46.72 Aligned_cols=109 Identities=12% Similarity=0.103 Sum_probs=62.7
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ ..+++..+|++++ +.+ |..... . ..-.|.. +.+++++.+ +.|++++++|...
T Consensus 163 l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~-~~d-~~~~~~--~---~~~~g~~-~~~l~ell~---~aDvV~l~~P~t~ 231 (335)
T 2g76_A 163 LNGKTLGILGLGRIGREVATRMQSFGMKTI-GYD-PIISPE--V---SASFGVQ-QLPLEEIWP---LCDFITVHTPLLP 231 (335)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EEC-SSSCHH--H---HHHTTCE-ECCHHHHGG---GCSEEEECCCCCT
T ss_pred CCcCEEEEEeECHHHHHHHHHHHHCCCEEE-EEC-CCcchh--h---hhhcCce-eCCHHHHHh---cCCEEEEecCCCH
Confidence 5567889886 43344 7788888999864 554 432210 0 0123443 358888876 3799999999864
Q ss_pred hHHHHH--HHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~~~~~--e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
....++ +.....+-..++|-++--+-.+++.|.+..++..+.
T Consensus 232 ~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~ 275 (335)
T 2g76_A 232 STTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCA 275 (335)
T ss_dssp TTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred HHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCcc
Confidence 222222 222222334455544433334778888888876543
No 181
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=80.82 E-value=1.4 Score=45.17 Aligned_cols=110 Identities=9% Similarity=0.044 Sum_probs=60.4
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCC-CCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINP-GAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p-~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
+.-+++.||| |..|+ ..+.+..+|++++ +.+ + .... .. ..-.|.....+++++.+. .|++++++|..
T Consensus 144 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~d-~~~~~~---~~--~~~~g~~~~~~l~ell~~---aDvVil~~p~~ 213 (320)
T 1gdh_A 144 LDNKTLGIYGFGSIGQALAKRAQGFDMDID-YFD-THRASS---SD--EASYQATFHDSLDSLLSV---SQFFSLNAPST 213 (320)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EEC-SSCCCH---HH--HHHHTCEECSSHHHHHHH---CSEEEECCCCC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EEC-CCCcCh---hh--hhhcCcEEcCCHHHHHhh---CCEEEEeccCc
Confidence 5566888886 43344 7788888998854 554 4 3321 00 011345544588888763 69999999964
Q ss_pred hhHHHHH-H-HhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 84 SAAASSM-A-ALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 84 ~~~~~~~-e-~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
.....++ + .....+-..++|-++--+-.+++.|.+..++..+.
T Consensus 214 ~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~ 258 (320)
T 1gdh_A 214 PETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLA 258 (320)
T ss_dssp TTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 3222222 1 12222223344433322222567777777776544
No 182
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=80.49 E-value=1.2 Score=46.31 Aligned_cols=107 Identities=12% Similarity=0.024 Sum_probs=60.7
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHH-hcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRML-DFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~-~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
+.-+++.||| |..|+ +.+.+. .+|++++ +.+ +..... +.. .-.|.....++.++..+ .|++++++|..
T Consensus 161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~-~~d-~~~~~~-~~~---~~~g~~~~~~l~ell~~---aDvVil~vp~~ 231 (348)
T 2w2k_A 161 PRGHVLGAVGLGAIQKEIARKAVHGLGMKLV-YYD-VAPADA-ETE---KALGAERVDSLEELARR---SDCVSVSVPYM 231 (348)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCCEEE-EEC-SSCCCH-HHH---HHHTCEECSSHHHHHHH---CSEEEECCCCS
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHhcCCEEE-EEC-CCCcch-hhH---hhcCcEEeCCHHHHhcc---CCEEEEeCCCC
Confidence 4556899996 43444 777888 8999864 444 422110 000 11245545588887663 69999999985
Q ss_pred hhHH-----HHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCC
Q 007482 84 SAAA-----SSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNK 125 (602)
Q Consensus 84 ~~~~-----~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~ 125 (602)
.... ..++.+. . ..++|-++.-+..+++.|.+..++..+
T Consensus 232 ~~t~~li~~~~l~~mk-~--gailin~srg~~vd~~aL~~aL~~~~i 275 (348)
T 2w2k_A 232 KLTHHLIDEAFFAAMK-P--GSRIVNTARGPVISQDALIAALKSGKL 275 (348)
T ss_dssp GGGTTCBCHHHHHHSC-T--TEEEEECSCGGGBCHHHHHHHHHTTSE
T ss_pred hHHHHHhhHHHHhcCC-C--CCEEEECCCCchhCHHHHHHHHHhCCc
Confidence 3222 3444443 2 344444443333466777777776543
No 183
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=80.26 E-value=2.4 Score=45.20 Aligned_cols=104 Identities=7% Similarity=-0.038 Sum_probs=61.3
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ +.+.+..+|++++ +.+ |... ....+...+.|++|+..+ .|++++++|...
T Consensus 154 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~-~yd-~~~~--------~~~~~~~~~~sl~ell~~---aDvV~lhvPlt~ 220 (416)
T 3k5p_A 154 VRGKTLGIVGYGNIGSQVGNLAESLGMTVR-YYD-TSDK--------LQYGNVKPAASLDELLKT---SDVVSLHVPSSK 220 (416)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-TTCC--------CCBTTBEECSSHHHHHHH---CSEEEECCCC--
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EEC-Ccch--------hcccCcEecCCHHHHHhh---CCEEEEeCCCCH
Confidence 3456888886 44444 7778888999864 444 4221 112234456899998874 699999999743
Q ss_pred hHH-----HHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AAA-----SSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~~-----~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
... ..++.+. -..++|=++--+-.+++.|.+..++..+.
T Consensus 221 ~T~~li~~~~l~~mk---~gailIN~aRG~vvd~~aL~~aL~~g~i~ 264 (416)
T 3k5p_A 221 STSKLITEAKLRKMK---KGAFLINNARGSDVDLEALAKVLQEGHLA 264 (416)
T ss_dssp ---CCBCHHHHHHSC---TTEEEEECSCTTSBCHHHHHHHHHTTSEE
T ss_pred HHhhhcCHHHHhhCC---CCcEEEECCCChhhhHHHHHHHHHcCCcc
Confidence 222 3344343 23444444322333788888888776554
No 184
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=79.97 E-value=2.2 Score=45.55 Aligned_cols=111 Identities=11% Similarity=0.036 Sum_probs=60.4
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCcccccc-------C---cee------ec-ccccCCHHHHhhcC
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFF-------G---QEE------IA-IPVHSTVEAACAAH 70 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~-------g---~~v------~G-~~~y~sv~~i~~~~ 70 (602)
++++||| |..|. ....|.+.|++++ +++ .... +.+.+. . ++. .| +....+++++..
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~-~~d-~~~~-~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~-- 75 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVI-GVD-VSST-KIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVL-- 75 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EEC-SCHH-HHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHH--
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEE-EEE-CCHH-HHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhc--
Confidence 4688897 45555 6667777898853 444 2111 000000 0 000 23 566677877555
Q ss_pred CCccEEEEecCChhh---------HHHHHHHhhCC-CC---cEEEEecCCCCHHH-HHHHHHHHHhC-CCe
Q 007482 71 PMADVFINFSSFRSA---------AASSMAALKQP-TI---RVVAIIAEGVPEAD-TKQLIAYARSN-NKV 126 (602)
Q Consensus 71 p~vDlavi~vp~~~~---------~~~~~e~~~~~-gv---~~~viis~Gf~E~~-~~~l~~~a~~~-g~r 126 (602)
+.|+++++||.+.. +..+++.+... .- ..+||..|..+... .+.+.+...+. |.+
T Consensus 76 -~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~ 145 (436)
T 1mv8_A 76 -DSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKK 145 (436)
T ss_dssp -TCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCC
T ss_pred -cCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcc
Confidence 47999999987653 56666655421 11 34555555554333 55666655553 443
No 185
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=79.92 E-value=1.7 Score=45.27 Aligned_cols=106 Identities=15% Similarity=0.067 Sum_probs=62.8
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ +.+++..+|++++ +.+ |..... +...|.....+++|+.. +.|++++++|...
T Consensus 171 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~-~~d-r~~~~~------~~~~g~~~~~~l~ell~---~sDvV~l~~Plt~ 239 (345)
T 4g2n_A 171 LTGRRLGIFGMGRIGRAIATRARGFGLAIH-YHN-RTRLSH------ALEEGAIYHDTLDSLLG---ASDIFLIAAPGRP 239 (345)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHTTTCEEE-EEC-SSCCCH------HHHTTCEECSSHHHHHH---TCSEEEECSCCCG
T ss_pred cCCCEEEEEEeChhHHHHHHHHHHCCCEEE-EEC-CCCcch------hhhcCCeEeCCHHHHHh---hCCEEEEecCCCH
Confidence 4446888886 44444 7788888999864 454 422110 01115555579999887 4799999999632
Q ss_pred hH-----HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~-----~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
.. ...++.+. -..++|=++--+-.+++.|.+..++..+.
T Consensus 240 ~T~~li~~~~l~~mk---~gailIN~aRG~~vde~aL~~aL~~g~i~ 283 (345)
T 4g2n_A 240 ELKGFLDHDRIAKIP---EGAVVINISRGDLINDDALIEALRSKHLF 283 (345)
T ss_dssp GGTTCBCHHHHHHSC---TTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HHHHHhCHHHHhhCC---CCcEEEECCCCchhCHHHHHHHHHhCCce
Confidence 22 23344443 23444434322223788888888776554
No 186
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=79.49 E-value=2.5 Score=43.30 Aligned_cols=105 Identities=10% Similarity=0.006 Sum_probs=60.7
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccc---cCCHHHHhhcCCCccEEEEecC
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPV---HSTVEAACAAHPMADVFINFSS 81 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~---y~sv~~i~~~~p~vDlavi~vp 81 (602)
+.-+++.||| |..|+ +.+.+..+|++++ +.+ +... ...++.. +.+++|+.. +.|++++++|
T Consensus 137 l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~-~~d-r~~~---------~~~~~~~~~~~~~l~ell~---~aDiV~l~~P 202 (315)
T 3pp8_A 137 REEFSVGIMGAGVLGAKVAESLQAWGFPLR-CWS-RSRK---------SWPGVESYVGREELRAFLN---QTRVLINLLP 202 (315)
T ss_dssp STTCCEEEECCSHHHHHHHHHHHTTTCCEE-EEE-SSCC---------CCTTCEEEESHHHHHHHHH---TCSEEEECCC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EEc-CCch---------hhhhhhhhcccCCHHHHHh---hCCEEEEecC
Confidence 4557899996 44444 7778888999864 444 3221 1112222 257888776 4799999999
Q ss_pred ChhhHHHHH--HHhhCCCCcEEEEecCCCCH-HHHHHHHHHHHhCCCe
Q 007482 82 FRSAAASSM--AALKQPTIRVVAIIAEGVPE-ADTKQLIAYARSNNKV 126 (602)
Q Consensus 82 ~~~~~~~~~--e~~~~~gv~~~viis~Gf~E-~~~~~l~~~a~~~g~r 126 (602)
.......++ +.....+-. +++|-.+=.+ .+++.|.+..++..+.
T Consensus 203 lt~~t~~li~~~~l~~mk~g-ailIN~aRG~~vd~~aL~~aL~~g~i~ 249 (315)
T 3pp8_A 203 NTAQTVGIINSELLDQLPDG-AYVLNLARGVHVQEADLLAALDSGKLK 249 (315)
T ss_dssp CCGGGTTCBSHHHHTTSCTT-EEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CchhhhhhccHHHHhhCCCC-CEEEECCCChhhhHHHHHHHHHhCCcc
Confidence 643333222 223322233 4444433333 3788888888877654
No 187
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=78.83 E-value=10 Score=39.79 Aligned_cols=115 Identities=18% Similarity=0.119 Sum_probs=59.8
Q ss_pred CCcEEEEee--CCcH-HHHHHHh-cCC---eEEEEEeCCCCCCccccccCceeeccccc--CCHHHHhhcCCCccEEEEe
Q 007482 9 KTTQALFYN--YKQL-PIQRMLD-FDF---LCVAGIINPGAEGFQKLFFGQEEIAIPVH--STVEAACAAHPMADVFINF 79 (602)
Q Consensus 9 p~s~avv~g--~~~~-~~~~~~~-~g~---~~V~gv~~p~~~~~~~~~~g~~v~G~~~y--~sv~~i~~~~p~vDlavi~ 79 (602)
+.+++|||+ +.|. +++.|++ +.| +++ .+.-...+++..+|.|.+ +++- .+..+. . ++|+++.|
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~-~~ss~~aG~~~~~~~~~~---~~v~~~~~~~~~-~---~vDvvf~a 75 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPV-FFSTSNAGGKAPSFAKNE---TTLKDATSIDDL-K---KCDVIITC 75 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEE-EEESSCTTSBCCTTCCSC---CBCEETTCHHHH-H---TCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEE-EEechhcCCCHHHcCCCc---eEEEeCCChhHh-c---CCCEEEEC
Confidence 568999963 4344 5552554 554 332 222122222223344421 2222 123332 3 48999999
Q ss_pred cCChhhHHHHHHHhhCCCCcEEEE-ecCCCC----------HHHHHHHHHHHHhCCC-eeEcCCcc
Q 007482 80 SSFRSAAASSMAALKQPTIRVVAI-IAEGVP----------EADTKQLIAYARSNNK-VVIGPATV 133 (602)
Q Consensus 80 vp~~~~~~~~~e~~~~~gv~~~vi-is~Gf~----------E~~~~~l~~~a~~~g~-riiGPNc~ 133 (602)
+|... .....+.+.++|+|..|| .|+-|. |.-.+++ +.+++.++ .|..|||.
T Consensus 76 ~~~~~-s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i-~~~~~~~i~~Ianp~C~ 139 (377)
T 3uw3_A 76 QGGDY-TNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVI-KDALVNGTKNFIGGNCT 139 (377)
T ss_dssp SCHHH-HHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHH-HHHHHTTCCEEEECCHH
T ss_pred CChHH-HHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHH-hhhhhcCCcEEEcCCHH
Confidence 98754 455566666689864444 344343 2223333 34445676 58899994
No 188
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=78.53 E-value=5.7 Score=37.28 Aligned_cols=90 Identities=13% Similarity=0.131 Sum_probs=42.7
Q ss_pred CcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccc-cCce--eecccccCCHHHHhhcCCCccEEEEecCC
Q 007482 10 TTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLF-FGQE--EIAIPVHSTVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 10 ~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~-~g~~--v~G~~~y~sv~~i~~~~p~vDlavi~vp~ 82 (602)
+++.|. |.+|. +++.|++.|++++.-...+.+. +.+ .+-+ ...+.-..++.++.+ ++|.+|.+...
T Consensus 5 ~~ilIt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLI-GASGFVGSALLNEALNRGFEVTAVVRHPEKI---KIENEHLKVKKADVSSLDEVCEVCK---GADAVISAFNP 77 (227)
T ss_dssp CEEEEE-TCCHHHHHHHHHHHHTTTCEEEEECSCGGGC---CCCCTTEEEECCCTTCHHHHHHHHT---TCSEEEECCCC
T ss_pred CEEEEE-cCCchHHHHHHHHHHHCCCEEEEEEcCcccc---hhccCceEEEEecCCCHHHHHHHhc---CCCEEEEeCcC
Confidence 345545 54444 7888888999864322212111 000 0000 012222233444433 36777766543
Q ss_pred h-----------hhHHHHHHHhhCCCCcEEEEecC
Q 007482 83 R-----------SAAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 83 ~-----------~~~~~~~e~~~~~gv~~~viis~ 106 (602)
. .....++++|.+.|++.+|.+|+
T Consensus 78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp ------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 2 11234566666666666666655
No 189
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=78.50 E-value=0.77 Score=47.73 Aligned_cols=100 Identities=11% Similarity=0.018 Sum_probs=58.9
Q ss_pred CcEEEEe-e-CCcHHHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcC-CCccEEEEecCChhhH
Q 007482 10 TTQALFY-N-YKQLPIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAH-PMADVFINFSSFRSAA 86 (602)
Q Consensus 10 ~s~avv~-g-~~~~~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~-p~vDlavi~vp~~~~~ 86 (602)
++++||| | +++.+.+.|.+.|+++ .+.+ +.... .+. ..-.|+..+.++.++.... .+.|+++++||.. .+
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V-~~~d-r~~~~-~~~---a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~-~~ 81 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSV-FGYN-RSRSG-AKS---AVDEGFDVSADLEATLQRAAAEDALIVLAVPMT-AI 81 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCE-EEEC-SCHHH-HHH---HHHTTCCEESCHHHHHHHHHHTTCEEEECSCHH-HH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEE-EEEe-CCHHH-HHH---HHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHH-HH
Confidence 4688886 3 3344888888899885 3554 32211 000 0124566677888765420 0259999999986 47
Q ss_pred HHHHHHhhCCCCcEEEEecCCCCHHHHHHH
Q 007482 87 ASSMAALKQPTIRVVAIIAEGVPEADTKQL 116 (602)
Q Consensus 87 ~~~~e~~~~~gv~~~viis~Gf~E~~~~~l 116 (602)
..+++++....-..+|+-.++.+....+++
T Consensus 82 ~~vl~~l~~~~~~~iv~Dv~Svk~~i~~~~ 111 (341)
T 3ktd_A 82 DSLLDAVHTHAPNNGFTDVVSVKTAVYDAV 111 (341)
T ss_dssp HHHHHHHHHHCTTCCEEECCSCSHHHHHHH
T ss_pred HHHHHHHHccCCCCEEEEcCCCChHHHHHH
Confidence 777777654333345555667765433344
No 190
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=78.24 E-value=5 Score=40.84 Aligned_cols=95 Identities=14% Similarity=-0.099 Sum_probs=52.3
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCC--CccccccCceeecc---------cccCCHHHHhhcCCCcc
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAE--GFQKLFFGQEEIAI---------PVHSTVEAACAAHPMAD 74 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~--~~~~~~~g~~v~G~---------~~y~sv~~i~~~~p~vD 74 (602)
.+++++||| |..|. ....|.+.|+++ ..+. .... .+.....|-.+.+. ..+.+++++.+ +.|
T Consensus 3 ~~mki~iiG~G~~G~~~a~~L~~~g~~V-~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~D 77 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGHAFAAYLALKGQSV-LAWD-IDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK---DAD 77 (359)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEE-EEEC-SCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT---TCS
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCEE-EEEe-CCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHh---cCC
Confidence 357899997 33344 667787888874 3443 2111 00000011122221 35678877654 489
Q ss_pred EEEEecCChhhHHHHHHHhhC-CCCcEEEEecCCC
Q 007482 75 VFINFSSFRSAAASSMAALKQ-PTIRVVAIIAEGV 108 (602)
Q Consensus 75 lavi~vp~~~~~~~~~e~~~~-~gv~~~viis~Gf 108 (602)
++++++|... ..++++.+.. .+-..+|+...|+
T Consensus 78 ~vi~~v~~~~-~~~~~~~l~~~l~~~~~vv~~~~~ 111 (359)
T 1bg6_A 78 VILIVVPAIH-HASIAANIASYISEGQLIILNPGA 111 (359)
T ss_dssp EEEECSCGGG-HHHHHHHHGGGCCTTCEEEESSCC
T ss_pred EEEEeCCchH-HHHHHHHHHHhCCCCCEEEEcCCC
Confidence 9999999875 5777777642 1223445544563
No 191
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=77.97 E-value=4.2 Score=47.05 Aligned_cols=96 Identities=11% Similarity=0.064 Sum_probs=75.8
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCC--ceeEEeeccCCCCCCC-CHHHH----HHHhhcCCCccEEEEEEecCCCc--
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVTD--GIYEGIAIGGDVFPGS-TLSDH----ILRFNNIPQVKMMVVLGELGGRD-- 230 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g~--G~s~~vs~Gn~~~~dv-~~~d~----l~~l~~Dp~t~~I~ly~E~g~~~-- 230 (602)
..|+|+.+.-.++++++.+|.....|- -...|..+|+.+ .. ...+. ++.+..||++|+|++-+=-|+.+
T Consensus 271 ldG~Ig~mvNGaGlamaTmD~I~~~Gg~~~pANFlDvGGga--~~e~v~~~~~~~l~ii~~d~~vk~ilvNIfGGI~~cd 348 (829)
T 3pff_A 271 PKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAP--SEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFT 348 (829)
T ss_dssp TTCSEEECCBSHHHHHHHHHHHHHTTCTTTBCEEEEEESCC--CHHHHHHHHHHHHHHTTSSCCTTCEEEEECBCBCSSC
T ss_pred cCCeEEeeccCchHHHHHHHHHHHcCCCCCCceeEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCccchH
Confidence 489999999999999999999998886 478999999987 32 23333 77888999999999988734433
Q ss_pred --H---HHHHHHHHhc-----CCCCCEEEEEeCcCcc
Q 007482 231 --E---YSLVEALKQG-----KVNKPVVAWVSGTCAR 257 (602)
Q Consensus 231 --~---~~f~~~~r~~-----~~~KPVv~~k~Gr~~~ 257 (602)
. +...+++++. ..++|||+-..|.+..
T Consensus 349 ~VA~tf~GIi~A~k~~~~~~~~~~vPiVVRl~GtN~e 385 (829)
T 3pff_A 349 NVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQ 385 (829)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTEEEEEECBSTTHH
T ss_pred HHHHHHhHHHHHHHHhhhhcccCCceEEEECCCCCHH
Confidence 3 4567788875 3689999998887754
No 192
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=77.77 E-value=5.9 Score=41.02 Aligned_cols=36 Identities=8% Similarity=-0.002 Sum_probs=26.5
Q ss_pred CccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCCCC
Q 007482 72 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 109 (602)
Q Consensus 72 ~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~ 109 (602)
++|+++.++|... .....+.+.++|++ +|.+|+-|.
T Consensus 68 ~vDvV~~a~g~~~-s~~~a~~~~~aG~~-VId~Sa~~r 103 (345)
T 2ozp_A 68 PADILVLALPHGV-FAREFDRYSALAPV-LVDLSADFR 103 (345)
T ss_dssp CCSEEEECCCTTH-HHHTHHHHHTTCSE-EEECSSTTS
T ss_pred CCCEEEEcCCcHH-HHHHHHHHHHCCCE-EEEcCcccc
Confidence 4899999999864 45566667778987 666676563
No 193
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=77.73 E-value=1.5 Score=46.55 Aligned_cols=111 Identities=13% Similarity=0.035 Sum_probs=62.6
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ +.+.+..+|++++ +.+ +..... .. ..-.|...+.+++++.. +.|++++++|...
T Consensus 189 l~gktvGIIGlG~IG~~vA~~l~a~G~~V~-~~d-~~~~~~--~~--~~~~G~~~~~~l~ell~---~aDvV~l~~Plt~ 259 (393)
T 2nac_A 189 LEAMHVGTVAAGRIGLAVLRRLAPFDVHLH-YTD-RHRLPE--SV--EKELNLTWHATREDMYP---VCDVVTLNCPLHP 259 (393)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTCEEE-EEC-SSCCCH--HH--HHHHTCEECSSHHHHGG---GCSEEEECSCCCT
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhCCCEEE-EEc-CCccch--hh--HhhcCceecCCHHHHHh---cCCEEEEecCCch
Confidence 4556888886 43444 7788888999864 444 422110 00 12246666678999876 3799999999642
Q ss_pred hHHHHH--HHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~~~~~--e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
....++ +.+...+-..++|-++--+-.+++.|.+..++..+.
T Consensus 260 ~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 303 (393)
T 2nac_A 260 ETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLA 303 (393)
T ss_dssp TTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEE
T ss_pred HHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCee
Confidence 222222 222222223344433322223678888888776543
No 194
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=77.42 E-value=2.3 Score=40.80 Aligned_cols=93 Identities=13% Similarity=0.059 Sum_probs=52.5
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhH
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAA 86 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~ 86 (602)
.++++||| |..|. +.+.+.+.|++++...+ +... +.+.+ .+-.|...+.+..+..+ +.|+++++||+. .+
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~-r~~~-~~~~l--~~~~g~~~~~~~~~~~~---~aDvVilavp~~-~~ 94 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANS-RGPA-SLSSV--TDRFGASVKAVELKDAL---QADVVILAVPYD-SI 94 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECT-TCGG-GGHHH--HHHHTTTEEECCHHHHT---TSSEEEEESCGG-GH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEEC-CCHH-HHHHH--HHHhCCCcccChHHHHh---cCCEEEEeCChH-HH
Confidence 35889897 33333 77888888988642122 2221 11111 01124555545455444 479999999986 47
Q ss_pred HHHHHHhhCCCCcEEEEecCCCC
Q 007482 87 ASSMAALKQPTIRVVAIIAEGVP 109 (602)
Q Consensus 87 ~~~~e~~~~~gv~~~viis~Gf~ 109 (602)
.++++++....=+.+|-++.|+.
T Consensus 95 ~~v~~~l~~~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 95 ADIVTQVSDWGGQIVVDASNAID 117 (220)
T ss_dssp HHHHTTCSCCTTCEEEECCCCBC
T ss_pred HHHHHHhhccCCCEEEEcCCCCC
Confidence 88888775322234444555773
No 195
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=76.77 E-value=3.2 Score=42.50 Aligned_cols=97 Identities=10% Similarity=-0.141 Sum_probs=53.6
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccc-------------cC----c----e-eecccccCCHH
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLF-------------FG----Q----E-EIAIPVHSTVE 64 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~-------------~g----~----~-v~G~~~y~sv~ 64 (602)
-++++||| |..|. +...+...||+++ ..+ +.... .+.. .| . + ...+....+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~-l~d-~~~~~-~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVK-LYD-IEPRQ-ITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEE-EEC-SCHHH-HHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEE-EEe-CCHHH-HHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHH
Confidence 46789997 43344 7788888999852 333 32110 0000 01 0 0 01245667888
Q ss_pred HHhhcCCCccEEEEecCChh-hHHHHHHHhhCC-CCcEEEE-ecCCCCHH
Q 007482 65 AACAAHPMADVFINFSSFRS-AAASSMAALKQP-TIRVVAI-IAEGVPEA 111 (602)
Q Consensus 65 ~i~~~~p~vDlavi~vp~~~-~~~~~~e~~~~~-gv~~~vi-is~Gf~E~ 111 (602)
++.. +.|+++.+||... ....+++++.+. .-..+++ .||+++.+
T Consensus 83 eav~---~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~ 129 (319)
T 2dpo_A 83 EAVE---GVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPS 129 (319)
T ss_dssp HHTT---TEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHH
T ss_pred HHHh---cCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHH
Confidence 7655 4899999999742 335566666532 1222332 57888764
No 196
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=76.64 E-value=1.8 Score=45.33 Aligned_cols=111 Identities=12% Similarity=0.008 Sum_probs=62.8
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCe-EEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFL-CVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~-~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
+.-+++.||| |..|+ +.+++..+|++ ++ +.+ +..... +. ..-.|...+.++.++.. +.|++++++|..
T Consensus 162 l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~-~~d-~~~~~~-~~---~~~~g~~~~~~l~ell~---~aDvV~l~~P~t 232 (364)
T 2j6i_A 162 IEGKTIATIGAGRIGYRVLERLVPFNPKELL-YYD-YQALPK-DA---EEKVGARRVENIEELVA---QADIVTVNAPLH 232 (364)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCCSEEE-EEC-SSCCCH-HH---HHHTTEEECSSHHHHHH---TCSEEEECCCCS
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCcEEE-EEC-CCccch-hH---HHhcCcEecCCHHHHHh---cCCEEEECCCCC
Confidence 5567899886 43344 77888889996 64 444 322110 00 01234455568999876 479999999985
Q ss_pred hhHHHHH--HHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 84 SAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 84 ~~~~~~~--e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
.....++ +.+...+-..++|-++--+-.+++.|.+..++.++.
T Consensus 233 ~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~ 277 (364)
T 2j6i_A 233 AGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLR 277 (364)
T ss_dssp TTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCc
Confidence 3222222 122222223344433322223788888888887654
No 197
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=76.51 E-value=2 Score=44.98 Aligned_cols=109 Identities=13% Similarity=0.048 Sum_probs=63.0
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ +.+++..+|++++ +.+ |..... . ..-.|.. |.+++|+.. +.|++++++|...
T Consensus 174 l~gktvGIIGlG~IG~~vA~~l~~fG~~V~-~~d-~~~~~~--~---~~~~g~~-~~~l~ell~---~aDvV~l~~Plt~ 242 (365)
T 4hy3_A 174 IAGSEIGIVGFGDLGKALRRVLSGFRARIR-VFD-PWLPRS--M---LEENGVE-PASLEDVLT---KSDFIFVVAAVTS 242 (365)
T ss_dssp SSSSEEEEECCSHHHHHHHHHHTTSCCEEE-EEC-SSSCHH--H---HHHTTCE-ECCHHHHHH---SCSEEEECSCSSC
T ss_pred cCCCEEEEecCCcccHHHHHhhhhCCCEEE-EEC-CCCCHH--H---HhhcCee-eCCHHHHHh---cCCEEEEcCcCCH
Confidence 4456888886 44444 7778888999864 444 432110 0 0113443 568999877 4799999999753
Q ss_pred hHHHHH--HHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~~~~~--e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
....++ +.....+-.+++|-++--+-.+++.|.+..++..+.
T Consensus 243 ~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 286 (365)
T 4hy3_A 243 ENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV 286 (365)
T ss_dssp C---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE
T ss_pred HHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce
Confidence 332222 222222333444444422334788899988887776
No 198
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=76.30 E-value=11 Score=39.51 Aligned_cols=60 Identities=17% Similarity=0.107 Sum_probs=37.0
Q ss_pred CccEEEEecCChhhHHHHHHHhhCCCCcEEEEe-cCCCC----------HHHHHHHHHHHHhCCC-eeEcCCcc
Q 007482 72 MADVFINFSSFRSAAASSMAALKQPTIRVVAII-AEGVP----------EADTKQLIAYARSNNK-VVIGPATV 133 (602)
Q Consensus 72 ~vDlavi~vp~~~~~~~~~e~~~~~gv~~~vii-s~Gf~----------E~~~~~l~~~a~~~g~-riiGPNc~ 133 (602)
++|+++.|+|... .....+.+.++|+|..||= |+-|. |.-.+++ +.++++++ .|..|||.
T Consensus 64 ~~Dvvf~a~~~~~-s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i-~~~~~~~i~~Ianp~C~ 135 (370)
T 3pzr_A 64 QLDAVITCQGGSY-TEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQI-LHGIHHGTKTFVGGNCT 135 (370)
T ss_dssp TCSEEEECSCHHH-HHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHH-HHHHHTTCCEEEECCHH
T ss_pred cCCEEEECCChHH-HHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHH-hhhhhcCCcEEEcCChH
Confidence 4899999998754 4555565666898644444 44342 2223333 44445776 48899993
No 199
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=75.97 E-value=1.7 Score=44.83 Aligned_cols=105 Identities=16% Similarity=0.026 Sum_probs=60.9
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ ..+.+..+|++++ +.+ +.... .+ .+ +.....+++++..+ .|++++++|...
T Consensus 144 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d-~~~~~---~~--~~--~~~~~~~l~ell~~---aDvV~l~~p~~~ 211 (333)
T 1j4a_A 144 VRDQVVGVVGTGHIGQVFMQIMEGFGAKVI-TYD-IFRNP---EL--EK--KGYYVDSLDDLYKQ---ADVISLHVPDVP 211 (333)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SSCCH---HH--HH--TTCBCSCHHHHHHH---CSEEEECSCCCG
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHCCCEEE-EEC-CCcch---hH--Hh--hCeecCCHHHHHhh---CCEEEEcCCCcH
Confidence 4456888886 33344 7888888999864 444 42221 11 11 12333488887763 699999999643
Q ss_pred hH-----HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~-----~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
.. ...++.+. . ..++|-++--+-.+++.|.+..++..+.
T Consensus 212 ~t~~li~~~~l~~mk-~--ga~lIn~arg~~vd~~aL~~aL~~g~i~ 255 (333)
T 1j4a_A 212 ANVHMINDESIAKMK-Q--DVVIVNVSRGPLVDTDAVIRGLDSGKIF 255 (333)
T ss_dssp GGTTCBSHHHHHHSC-T--TEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HHHHHHhHHHHhhCC-C--CcEEEECCCCcccCHHHHHHHHHhCCce
Confidence 22 23445443 2 2333333322223788898888887655
No 200
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=75.23 E-value=2 Score=42.20 Aligned_cols=55 Identities=20% Similarity=0.206 Sum_probs=38.9
Q ss_pred CHHHHHHHhhcCCCccEEEEEEecCCCc---HHHHHHHHHhcC--CCCCEEEEEeCcCcc
Q 007482 203 TLSDHILRFNNIPQVKMMVVLGELGGRD---EYSLVEALKQGK--VNKPVVAWVSGTCAR 257 (602)
Q Consensus 203 ~~~d~l~~l~~Dp~t~~I~ly~E~g~~~---~~~f~~~~r~~~--~~KPVv~~k~Gr~~~ 257 (602)
++.+.|+.+.+||++|+|+|.++-...+ .+.+.+++++.+ .+||||+..-|....
T Consensus 33 ~l~~~l~~a~~d~~v~~ivL~~~s~Gg~~~~~~~i~~~l~~~~~~~~kPVia~v~g~a~~ 92 (240)
T 3rst_A 33 TFLKNLERAKDDKTVKGIVLKVNSPGGGVYESAEIHKKLEEIKKETKKPIYVSMGSMAAS 92 (240)
T ss_dssp HHHHHHHHHHHCTTEEEEEEEEEECCBCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEET
T ss_pred HHHHHHHHHHhCCCcEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEECCeehH
Confidence 4666777888899999999999922222 345555666554 389999988775544
No 201
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=74.20 E-value=2 Score=44.19 Aligned_cols=107 Identities=13% Similarity=0.052 Sum_probs=59.5
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-++++||| |..|+ +.+.+..+|++++ +.+ +.... .+.. .-.|+... ++.++..+ .|++++++|...
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d-~~~~~-~~~~---~~~g~~~~-~l~e~l~~---aDvVi~~vp~~~ 222 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKPFGVQRF-LYT-GRQPR-PEEA---AEFQAEFV-STPELAAQ---SDFIVVACSLTP 222 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTCCEE-EEE-SSSCC-HHHH---HTTTCEEC-CHHHHHHH---CSEEEECCCCCT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EEC-CCCcc-hhHH---HhcCceeC-CHHHHHhh---CCEEEEeCCCCh
Confidence 4556899996 43344 7777888999854 454 32211 0000 11234433 88887663 699999999753
Q ss_pred hH-----HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~-----~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
.. ...++.+. .| .++|-++-.+..++++|.+..++.++.
T Consensus 223 ~t~~~i~~~~~~~mk-~g--ailIn~srg~~v~~~aL~~aL~~~~i~ 266 (330)
T 2gcg_A 223 ATEGLCNKDFFQKMK-ET--AVFINISRGDVVNQDDLYQALASGKIA 266 (330)
T ss_dssp TTTTCBSHHHHHHSC-TT--CEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred HHHHhhCHHHHhcCC-CC--cEEEECCCCcccCHHHHHHHHHcCCcc
Confidence 22 23444443 33 344433332333566777777776554
No 202
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=73.70 E-value=2.5 Score=43.56 Aligned_cols=93 Identities=13% Similarity=0.040 Sum_probs=55.0
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+..++++||| |..|. +.++|.+.|++++ ..+ +......+. ..-.|+.++ ++.++.. +.|+++++||...
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G~~V~-~~~-~~~~~~~~~---a~~~G~~~~-~~~e~~~---~aDvVilavp~~~ 84 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVT-VGL-RSGSATVAK---AEAHGLKVA-DVKTAVA---AADVVMILTPDEF 84 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTCCEE-EEC-CTTCHHHHH---HHHTTCEEE-CHHHHHH---TCSEEEECSCHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCcCEEE-EEE-CChHHHHHH---HHHCCCEEc-cHHHHHh---cCCEEEEeCCcHH
Confidence 3456899997 33344 7788888998864 332 322100000 011355555 7877665 4799999999875
Q ss_pred hHHHHHH-HhhC-CCCcEEEEecCCCC
Q 007482 85 AAASSMA-ALKQ-PTIRVVAIIAEGVP 109 (602)
Q Consensus 85 ~~~~~~e-~~~~-~gv~~~viis~Gf~ 109 (602)
...+++ ++.. ..-..+++..+|++
T Consensus 85 -~~~v~~~~i~~~l~~~~ivi~~~gv~ 110 (338)
T 1np3_A 85 -QGRLYKEEIEPNLKKGATLAFAHGFS 110 (338)
T ss_dssp -HHHHHHHHTGGGCCTTCEEEESCCHH
T ss_pred -HHHHHHHHHHhhCCCCCEEEEcCCch
Confidence 577776 6542 22234666667753
No 203
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=72.77 E-value=1.7 Score=44.28 Aligned_cols=106 Identities=12% Similarity=0.066 Sum_probs=60.9
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ ..+.+..+|++++ +.+ +.... +. ..-.|... .+++++.+. .|++++++|...
T Consensus 140 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d-~~~~~--~~---~~~~g~~~-~~l~ell~~---aDvV~l~~p~~~ 208 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGYQVAKIANALGMNIL-LYD-PYPNE--ER---AKEVNGKF-VDLETLLKE---SDVVTIHVPLVE 208 (307)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SSCCH--HH---HHHTTCEE-CCHHHHHHH---CSEEEECCCCST
T ss_pred cCCceEEEEccCHHHHHHHHHHHHCCCEEE-EEC-CCCCh--hh---HhhcCccc-cCHHHHHhh---CCEEEEecCCCh
Confidence 5567889886 43344 7788888999864 444 42211 00 01124443 378887763 799999999643
Q ss_pred hH-----HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~-----~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
.. ...++.+. .| .++|-++--+-.+++.|.+..++..+.
T Consensus 209 ~t~~li~~~~l~~mk-~g--a~lin~arg~~vd~~aL~~aL~~g~i~ 252 (307)
T 1wwk_A 209 STYHLINEERLKLMK-KT--AILINTSRGPVVDTNALVKALKEGWIA 252 (307)
T ss_dssp TTTTCBCHHHHHHSC-TT--CEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred HHhhhcCHHHHhcCC-CC--eEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 11 23445454 33 344433322223677888888876554
No 204
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=72.68 E-value=49 Score=32.26 Aligned_cols=91 Identities=5% Similarity=-0.144 Sum_probs=47.5
Q ss_pred CCcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCC-CccccccCceeec-ccccCCHHHHhhcCCCccEEEEecCC
Q 007482 9 KTTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAE-GFQKLFFGQEEIA-IPVHSTVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 9 p~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~-~~~~~~~g~~v~G-~~~y~sv~~i~~~~p~vDlavi~vp~ 82 (602)
.+++.|. |.+|. +++.|++.|++++.-...+... ...+.+ ..... -.+-.-..|+. ++|.+|-+...
T Consensus 7 ~~~vlVt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~Dl~----~~d~vi~~a~~ 79 (321)
T 3vps_A 7 KHRILIT-GGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGT--GKFLEKPVLELEERDLS----DVRLVYHLASH 79 (321)
T ss_dssp CCEEEEE-TTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTS--SEEECSCGGGCCHHHHT----TEEEEEECCCC
T ss_pred CCeEEEE-CCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhh--hhhccCCCeeEEeCccc----cCCEEEECCcc
Confidence 4555555 44443 8888888999875333212200 000001 11111 11111234542 37888766532
Q ss_pred hh----------------hHHHHHHHhhCCCCcEEEEecC
Q 007482 83 RS----------------AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 83 ~~----------------~~~~~~e~~~~~gv~~~viis~ 106 (602)
.. ....++++|.+.|++.+|.+|+
T Consensus 80 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS 119 (321)
T 3vps_A 80 KSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGST 119 (321)
T ss_dssp CCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecC
Confidence 21 1245888998889999988886
No 205
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=72.64 E-value=8.1 Score=41.78 Aligned_cols=110 Identities=12% Similarity=0.008 Sum_probs=60.4
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhc--CCeEEEEEeCCCCCCcccccc---------C-cee------ecccccCCHHHHhh
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDF--DFLCVAGIINPGAEGFQKLFF---------G-QEE------IAIPVHSTVEAACA 68 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~--g~~~V~gv~~p~~~~~~~~~~---------g-~~v------~G~~~y~sv~~i~~ 68 (602)
.++|+||| |..|. ...+|.+. |++++ +++ .... +.+.+. | ++. .++.+..++.+...
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~-~~D-~~~~-~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~ 85 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVT-VVD-MNTA-KIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIA 85 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEE-EEC-SCHH-HHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEE-EEE-CCHH-HHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhh
Confidence 36899997 55566 55666665 67753 454 2110 000000 0 000 13455566656554
Q ss_pred cCCCccEEEEecCChh--------------hHHHHHHHhhC-CCCcEEEEecCCCCHHHHHHHHHHHHh-CC
Q 007482 69 AHPMADVFINFSSFRS--------------AAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARS-NN 124 (602)
Q Consensus 69 ~~p~vDlavi~vp~~~--------------~~~~~~e~~~~-~gv~~~viis~Gf~E~~~~~l~~~a~~-~g 124 (602)
+.|+++++||.+. .+.++++.+.+ ..-..+||..|..+....+++.+..++ .+
T Consensus 86 ---~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~ 154 (481)
T 2o3j_A 86 ---EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQK 154 (481)
T ss_dssp ---HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC
T ss_pred ---cCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhC
Confidence 3799999998643 15556665542 223467777666665545567776666 44
No 206
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=72.58 E-value=4.1 Score=41.55 Aligned_cols=102 Identities=15% Similarity=0.054 Sum_probs=57.8
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ ..+++..+|++++ +.+ +.... .+ . .|.++.++.++ .|++++++|...
T Consensus 142 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~d-~~~~~-------~~---~-~~~~l~ell~~---aDvV~l~~p~~~ 205 (311)
T 2cuk_A 142 LQGLTLGLVGMGRIGQAVAKRALAFGMRVV-YHA-RTPKP-------LP---Y-PFLSLEELLKE---ADVVSLHTPLTP 205 (311)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SSCCS-------SS---S-CBCCHHHHHHH---CSEEEECCCCCT
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHCCCEEE-EEC-CCCcc-------cc---c-ccCCHHHHHhh---CCEEEEeCCCCh
Confidence 4556889886 43344 7788888999853 454 43221 11 2 36789888763 699999999863
Q ss_pred hHHHHH--HHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCC
Q 007482 85 AAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNK 125 (602)
Q Consensus 85 ~~~~~~--e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~ 125 (602)
....++ +.....+-..++|-++--+-.+++.|.+..+ ..+
T Consensus 206 ~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i 247 (311)
T 2cuk_A 206 ETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHL 247 (311)
T ss_dssp TTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTS
T ss_pred HHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcC
Confidence 222222 1222222233444333222236677777776 443
No 207
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=72.41 E-value=1.4 Score=45.07 Aligned_cols=106 Identities=11% Similarity=0.026 Sum_probs=61.6
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ ..+++..+|++++ +.+ +..... . ..-.|.. +.+++++.+. .|++++++|...
T Consensus 140 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~d-~~~~~~--~---~~~~g~~-~~~l~ell~~---aDvVvl~~P~~~ 208 (313)
T 2ekl_A 140 LAGKTIGIVGFGRIGTKVGIIANAMGMKVL-AYD-ILDIRE--K---AEKINAK-AVSLEELLKN---SDVISLHVTVSK 208 (313)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEE-EEC-SSCCHH--H---HHHTTCE-ECCHHHHHHH---CSEEEECCCCCT
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EEC-CCcchh--H---HHhcCce-ecCHHHHHhh---CCEEEEeccCCh
Confidence 4567888886 33344 7788888999864 444 422210 0 0122444 3488887763 699999999643
Q ss_pred hH-----HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~-----~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
.. ...++.+. + ..++|-++--+-.+++.|.+..++.++.
T Consensus 209 ~t~~li~~~~l~~mk-~--ga~lIn~arg~~vd~~aL~~aL~~g~i~ 252 (313)
T 2ekl_A 209 DAKPIIDYPQFELMK-D--NVIIVNTSRAVAVNGKALLDYIKKGKVY 252 (313)
T ss_dssp TSCCSBCHHHHHHSC-T--TEEEEESSCGGGBCHHHHHHHHHTTCEE
T ss_pred HHHHhhCHHHHhcCC-C--CCEEEECCCCcccCHHHHHHHHHcCCCc
Confidence 22 34455554 2 3344433322233778888888876553
No 208
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=72.13 E-value=1.8 Score=45.59 Aligned_cols=105 Identities=15% Similarity=0.088 Sum_probs=63.9
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ +.+++..+|++++ +.+ |.... ..+...|.+++++..+ .|++++++|...
T Consensus 117 l~gktvGIIGlG~IG~~vA~~l~a~G~~V~-~~d-~~~~~---------~~~~~~~~sl~ell~~---aDiV~l~~Plt~ 182 (381)
T 3oet_A 117 LRDRTIGIVGVGNVGSRLQTRLEALGIRTL-LCD-PPRAA---------RGDEGDFRTLDELVQE---ADVLTFHTPLYK 182 (381)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-HHHHH---------TTCCSCBCCHHHHHHH---CSEEEECCCCCC
T ss_pred cCCCEEEEEeECHHHHHHHHHHHHCCCEEE-EEC-CChHH---------hccCcccCCHHHHHhh---CCEEEEcCcCCc
Confidence 3456888886 44444 7888888999864 444 42210 0012357899998874 699999999643
Q ss_pred h--------H-HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE
Q 007482 85 A--------A-ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 128 (602)
Q Consensus 85 ~--------~-~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii 128 (602)
. + ...++.+. -..++|=++--+-.+++.|.+..++.++.-.
T Consensus 183 ~g~~~T~~li~~~~l~~mk---~gailIN~aRG~vvde~aL~~aL~~g~i~gA 232 (381)
T 3oet_A 183 DGPYKTLHLADETLIRRLK---PGAILINACRGPVVDNAALLARLNAGQPLSV 232 (381)
T ss_dssp SSTTCCTTSBCHHHHHHSC---TTEEEEECSCGGGBCHHHHHHHHHTTCCEEE
T ss_pred cccccchhhcCHHHHhcCC---CCcEEEECCCCcccCHHHHHHHHHhCCCeEE
Confidence 2 1 23455554 2334443432222378889888888766533
No 209
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=71.99 E-value=21 Score=35.76 Aligned_cols=91 Identities=7% Similarity=-0.043 Sum_probs=51.0
Q ss_pred CCCCcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCC
Q 007482 7 FSKTTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 7 ~~p~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~ 82 (602)
.+++++.|.| .+|. +++.|++.|++++.-...+.+. +...+ ...+.-..++.++.. ++|.+|-+...
T Consensus 17 ~~~~~vlVtG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~----~~Dl~d~~~~~~~~~---~~d~vih~A~~ 87 (347)
T 4id9_A 17 RGSHMILVTG-SAGRVGRAVVAALRTQGRTVRGFDLRPSGT-GGEEV----VGSLEDGQALSDAIM---GVSAVLHLGAF 87 (347)
T ss_dssp ----CEEEET-TTSHHHHHHHHHHHHTTCCEEEEESSCCSS-CCSEE----ESCTTCHHHHHHHHT---TCSEEEECCCC
T ss_pred cCCCEEEEEC-CCChHHHHHHHHHHhCCCEEEEEeCCCCCC-CccEE----ecCcCCHHHHHHHHh---CCCEEEECCcc
Confidence 4556666665 3333 8888888999875433322221 11111 123333445556554 47998866532
Q ss_pred hh---------------hHHHHHHHhhCCCCcEEEEecC
Q 007482 83 RS---------------AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 83 ~~---------------~~~~~~e~~~~~gv~~~viis~ 106 (602)
.. ....++++|.+.|++.+|.+|+
T Consensus 88 ~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 88 MSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp CCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred cCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 11 1245788898899999998887
No 210
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=71.68 E-value=1 Score=46.94 Aligned_cols=110 Identities=9% Similarity=0.003 Sum_probs=64.1
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ +.+++..+|++++ +.+ |.... +. ..-.|+..+.+++|+..+ .|++++++|...
T Consensus 158 l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~-~~d-~~~~~--~~---~~~~g~~~~~~l~ell~~---aDiV~l~~Plt~ 227 (352)
T 3gg9_A 158 LKGQTLGIFGYGKIGQLVAGYGRAFGMNVL-VWG-RENSK--ER---ARADGFAVAESKDALFEQ---SDVLSVHLRLND 227 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SHHHH--HH---HHHTTCEECSSHHHHHHH---CSEEEECCCCST
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhCCCEEE-EEC-CCCCH--HH---HHhcCceEeCCHHHHHhh---CCEEEEeccCcH
Confidence 4456888886 43344 7788888999864 444 42110 00 112456666799998874 699999999643
Q ss_pred hHHHHH--HHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~~~~~--e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
....++ +.....+-..++|-++--+-.+++.|.+..++..++
T Consensus 228 ~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 271 (352)
T 3gg9_A 228 ETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPG 271 (352)
T ss_dssp TTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSS
T ss_pred HHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCcc
Confidence 222211 222222233444444432333778888888887765
No 211
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=71.44 E-value=8.2 Score=37.98 Aligned_cols=103 Identities=10% Similarity=-0.052 Sum_probs=55.1
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCC--eEEEEEeCCCCCCccccccCceeeccc--ccCCHHHHhhcCCCccEEEEecCCh
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDF--LCVAGIINPGAEGFQKLFFGQEEIAIP--VHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~--~~V~gv~~p~~~~~~~~~~g~~v~G~~--~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
++++||| |..|. +.+.+.+.|+ ++ .+++ +.... .+.+ .-.|.. .+.++.++... +.|+++++||+.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V-~~~d-~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~--~aDvVilavp~~ 73 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKI-YGYD-INPES-ISKA---VDLGIIDEGTTSIAKVEDF--SPDFVMLSSPVR 73 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEE-EEEC-SCHHH-HHHH---HHTTSCSEEESCGGGGGGT--CCSEEEECSCHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEE-EEEe-CCHHH-HHHH---HHCCCcccccCCHHHHhcC--CCCEEEEcCCHH
Confidence 4688886 33333 7778888887 54 3444 32210 0000 012332 35567665441 279999999987
Q ss_pred hhHHHHHHHhhC-CCCcEEEEecCCCCHHHHHHHHHHHH
Q 007482 84 SAAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYAR 121 (602)
Q Consensus 84 ~~~~~~~e~~~~-~gv~~~viis~Gf~E~~~~~l~~~a~ 121 (602)
. ...+++++.. .+-+.+|+..++.+....+.+.+...
T Consensus 74 ~-~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~ 111 (281)
T 2g5c_A 74 T-FREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILG 111 (281)
T ss_dssp H-HHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHG
T ss_pred H-HHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhcc
Confidence 4 5666665532 12234555556665444445555443
No 212
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=71.20 E-value=5 Score=41.81 Aligned_cols=111 Identities=18% Similarity=0.114 Sum_probs=61.7
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhc--C--CeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcC------------
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDF--D--FLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAH------------ 70 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~--g--~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~------------ 70 (602)
+..++|+| |.-|+ +++++.+. | .++++..+ . +.. .+ ..+..|++.|.+..+++...
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d-~-~~~---~~-~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e 77 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAE-A-ERS---LI-SKDFSPLNVGSDWKAALAASTTKTLPLDDLIA 77 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEEC-S-SBE---EE-CSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHH
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEE-C-Chh---hh-ccccCCCCccccHHHHHhcccCCCCCHHHHHH
Confidence 34678885 33344 77777764 3 44454333 2 110 11 01111666677777765431
Q ss_pred -----CCccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCC-CC--HHHHHHHHHHHHhCCCeeE
Q 007482 71 -----PMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEG-VP--EADTKQLIAYARSNNKVVI 128 (602)
Q Consensus 71 -----p~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~G-f~--E~~~~~l~~~a~~~g~rii 128 (602)
+.+|++|+|+|........++++. +|.. +|+.... +. -..-++|. .|+++|+++.
T Consensus 78 ~~~~~~~~DvVV~~t~~~~~a~~~~~AL~-aGkh-VVtaNkkpla~~~~~~~eL~-~A~~~gv~~~ 140 (358)
T 1ebf_A 78 HLKTSPKPVILVDNTSSAYIAGFYTKFVE-NGIS-IATPNKKAFSSDLATWKALF-SNKPTNGFVY 140 (358)
T ss_dssp HHTTCSSCEEEEECSCCHHHHTTHHHHHH-TTCE-EECCCCGGGSSCHHHHHHHT-CCCTTCCCEE
T ss_pred HhhhccCCcEEEEcCCChHHHHHHHHHHH-CCCe-EEecCcccccCCHHHHHHHH-HHHHcCCEEE
Confidence 113799999998754555555554 7764 4432232 33 23567888 9999998763
No 213
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=71.15 E-value=2.8 Score=42.89 Aligned_cols=48 Identities=19% Similarity=0.169 Sum_probs=33.0
Q ss_pred ccccCCHHHHhhcCCCccEEEEecCChhhHHHHHHHhhCCCC---cEEEEecCCCC
Q 007482 57 IPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTI---RVVAIIAEGVP 109 (602)
Q Consensus 57 ~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~~e~~~~~gv---~~~viis~Gf~ 109 (602)
+....+++++.. +.|+++++||.. .+.++++.+.. .+ ..+|.++.|+.
T Consensus 78 ~~~~~~~~~~~~---~aD~Vilav~~~-~~~~v~~~i~~-~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 78 VVAVPDVVQAAE---DADILIFVVPHQ-FIGKICDQLKG-HLKANATGISLIKGVD 128 (354)
T ss_dssp EEEESSHHHHHT---TCSEEEECCCGG-GHHHHHHHHTT-CSCTTCEEEECCCCBC
T ss_pred eEEEcCHHHHHc---CCCEEEEeCCHH-HHHHHHHHHHh-hCCCCCEEEEECCccC
Confidence 455677777654 479999999986 57888888763 22 23555566875
No 214
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=71.08 E-value=2.8 Score=43.69 Aligned_cols=108 Identities=11% Similarity=0.025 Sum_probs=64.8
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.=+++.||| |..|+ +.+.+..+|++++ +.+ +.... .+. ..-.|...+.++.|+.. +.|++++++|...
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~G~~V~-~~d-r~~~~-~~~---~~~~g~~~~~~l~ell~---~aDvV~l~~Plt~ 232 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPFGCNLL-YHD-RLQMA-PEL---EKETGAKFVEDLNEMLP---KCDVIVINMPLTE 232 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCCEEE-EEC-SSCCC-HHH---HHHHCCEECSCHHHHGG---GCSEEEECSCCCT
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHCCCEEE-EeC-CCccC-HHH---HHhCCCeEcCCHHHHHh---cCCEEEECCCCCH
Confidence 4556889886 44444 7788888999853 554 32210 000 11235666679999876 3799999999632
Q ss_pred hH-----HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~-----~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
.. ...++.+. -..++|-++--+-.+++.|.+..++..+.
T Consensus 233 ~t~~li~~~~l~~mk---~gailIN~aRG~~vde~aL~~aL~~g~i~ 276 (351)
T 3jtm_A 233 KTRGMFNKELIGKLK---KGVLIVNNARGAIMERQAVVDAVESGHIG 276 (351)
T ss_dssp TTTTCBSHHHHHHSC---TTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HHHHhhcHHHHhcCC---CCCEEEECcCchhhCHHHHHHHHHhCCcc
Confidence 11 34455444 23444444322333788888888887655
No 215
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=70.95 E-value=26 Score=34.98 Aligned_cols=46 Identities=11% Similarity=0.140 Sum_probs=29.3
Q ss_pred cCCHHHHhhcCCCccEEEEecCChh-----------------hHHHHHHHhhCCCCcEEEEecC
Q 007482 60 HSTVEAACAAHPMADVFINFSSFRS-----------------AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 60 y~sv~~i~~~~p~vDlavi~vp~~~-----------------~~~~~~e~~~~~gv~~~viis~ 106 (602)
..++.++.... ++|.+|-+..... ....++++|.+.|++.+|.+|+
T Consensus 87 ~~~~~~~~~~~-~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 87 GELLEHVIKER-DVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHHHH-TCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHHHHhhc-CCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 34455555432 3799886654211 0246788898889998888875
No 216
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=70.89 E-value=1.8 Score=45.57 Aligned_cols=103 Identities=14% Similarity=0.078 Sum_probs=62.2
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ +.+++..+|++++ +.+ |.... .-.|. .|.+++++..+ .|++++++|...
T Consensus 114 l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~-~~d-~~~~~--------~~~g~-~~~~l~ell~~---aDvV~l~~Plt~ 179 (380)
T 2o4c_A 114 LAERTYGVVGAGQVGGRLVEVLRGLGWKVL-VCD-PPRQA--------REPDG-EFVSLERLLAE---ADVISLHTPLNR 179 (380)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-HHHHH--------HSTTS-CCCCHHHHHHH---CSEEEECCCCCS
T ss_pred cCCCEEEEEeCCHHHHHHHHHHHHCCCEEE-EEc-CChhh--------hccCc-ccCCHHHHHHh---CCEEEEeccCcc
Confidence 4556889896 44444 7788888999864 444 42210 00122 46789998763 699999998643
Q ss_pred h--------H-HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 A--------A-ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~--------~-~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
. + ...++.+. -..++|-++--+-.+++.|.+..++.++.
T Consensus 180 ~g~~~T~~li~~~~l~~mk---~gailIN~sRG~vvd~~aL~~aL~~g~i~ 227 (380)
T 2o4c_A 180 DGEHPTRHLLDEPRLAALR---PGTWLVNASRGAVVDNQALRRLLEGGADL 227 (380)
T ss_dssp SSSSCCTTSBCHHHHHTSC---TTEEEEECSCGGGBCHHHHHHHHHTTCCE
T ss_pred ccccchhhhcCHHHHhhCC---CCcEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 2 1 23444443 33444434322223778888888877665
No 217
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=70.88 E-value=4.5 Score=43.45 Aligned_cols=107 Identities=10% Similarity=0.069 Sum_probs=61.9
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCcccccc-C---------ce-------eecccccCCHHHHhhcC
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFF-G---------QE-------EIAIPVHSTVEAACAAH 70 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~-g---------~~-------v~G~~~y~sv~~i~~~~ 70 (602)
++|+||| |..|. ....+.+.|++++ +++ .... +.+.+. | ++ -..+....+++++..
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~-~~D-~~~~-~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~-- 77 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVR-CID-TDRN-KIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVP-- 77 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SCHH-HHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGG--
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEE-EEE-CCHH-HHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHh--
Confidence 6789996 44444 6677777899864 444 2111 000000 0 00 112456677887655
Q ss_pred CCccEEEEecCChh---------hHHHHHHHhhC-CCCcEEEEecCCCCHHHHHHHHHHHHh
Q 007482 71 PMADVFINFSSFRS---------AAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARS 122 (602)
Q Consensus 71 p~vDlavi~vp~~~---------~~~~~~e~~~~-~gv~~~viis~Gf~E~~~~~l~~~a~~ 122 (602)
+.|+++++||.+. .+.++++.+.+ ..-..+||..|.++....+++.+..++
T Consensus 78 -~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 78 -EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp -GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred -cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 3799999998862 36667766653 223467777777765555556555554
No 218
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=70.58 E-value=1.5 Score=44.39 Aligned_cols=91 Identities=12% Similarity=0.006 Sum_probs=49.8
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCC-CCCCcccccc--------CceeecccccC--CHHHHhhcCCCccEE
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINP-GAEGFQKLFF--------GQEEIAIPVHS--TVEAACAAHPMADVF 76 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p-~~~~~~~~~~--------g~~v~G~~~y~--sv~~i~~~~p~vDla 76 (602)
++++||| |..|. ...+|.+.|+++ ..++.+ ... +.+.+. |.+...+.+.. +++++.+ +.|++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V-~~~~r~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~D~v 75 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEV-RIWGTEFDTE-ILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE---NAEVV 75 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEE-EEECCGGGHH-HHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT---TCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeE-EEEEccCCHH-HHHHHHHhCcCcccCccccceEEecHHhHHHHHh---cCCEE
Confidence 3688886 33344 677788888875 234310 111 000000 10101124454 6766544 47999
Q ss_pred EEecCChhhHHHHHHHhhCCCCc--EEE-EecCCC
Q 007482 77 INFSSFRSAAASSMAALKQPTIR--VVA-IIAEGV 108 (602)
Q Consensus 77 vi~vp~~~~~~~~~e~~~~~gv~--~~v-iis~Gf 108 (602)
+++||+. .+.++++.+.. ++ .+| .++.|+
T Consensus 76 i~~v~~~-~~~~v~~~i~~--l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 76 LLGVSTD-GVLPVMSRILP--YLKDQYIVLISKGL 107 (335)
T ss_dssp EECSCGG-GHHHHHHHHTT--TCCSCEEEECCCSE
T ss_pred EEcCChH-HHHHHHHHHhc--CCCCCEEEEEcCcC
Confidence 9999987 47888887763 43 333 344587
No 219
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=69.39 E-value=2.6 Score=44.56 Aligned_cols=70 Identities=9% Similarity=0.038 Sum_probs=47.6
Q ss_pred cCCHHHHhhcCCCccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCCCCH-------HHHHHHHHHHHhCCCe-eEcCC
Q 007482 60 HSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPE-------ADTKQLIAYARSNNKV-VIGPA 131 (602)
Q Consensus 60 y~sv~~i~~~~p~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E-------~~~~~l~~~a~~~g~r-iiGPN 131 (602)
+.++.++..+. ++|++|.++|+.. ...++++|.+.|++.+. +|+-.+. ..+.++.+.|++.|+. +.|++
T Consensus 65 ~~~l~~~l~~~-~~DvVin~ag~~~-~~~v~~a~l~~g~~vvD-~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G 141 (405)
T 4ina_A 65 IEELVALINEV-KPQIVLNIALPYQ-DLTIMEACLRTGVPYLD-TANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSG 141 (405)
T ss_dssp HHHHHHHHHHH-CCSEEEECSCGGG-HHHHHHHHHHHTCCEEE-SSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCB
T ss_pred HHHHHHHHHhh-CCCEEEECCCccc-ChHHHHHHHHhCCCEEE-ecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCC
Confidence 45666666543 3799999998754 56788888889998543 3322121 2456889999999987 66665
Q ss_pred c
Q 007482 132 T 132 (602)
Q Consensus 132 c 132 (602)
|
T Consensus 142 ~ 142 (405)
T 4ina_A 142 F 142 (405)
T ss_dssp T
T ss_pred C
Confidence 4
No 220
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=69.31 E-value=7 Score=42.04 Aligned_cols=109 Identities=8% Similarity=0.022 Sum_probs=60.1
Q ss_pred CcEEEEe-eCCcH-HHHHHHhc--CCeEEEEEeCCCCCCccccc-------cCc---e-e-----ecccccCCHHHHhhc
Q 007482 10 TTQALFY-NYKQL-PIQRMLDF--DFLCVAGIINPGAEGFQKLF-------FGQ---E-E-----IAIPVHSTVEAACAA 69 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~--g~~~V~gv~~p~~~~~~~~~-------~g~---~-v-----~G~~~y~sv~~i~~~ 69 (602)
++++||| |..|. ...+|.+. |+++ .+++ .... +.+.+ ... + + .++....+++++..
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V-~~~d-~~~~-~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~- 81 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRV-TVVD-VNES-RINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIK- 81 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEE-EEEC-SCHH-HHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHH-
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEE-EEEE-CCHH-HHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHh-
Confidence 6899997 55565 66677776 7875 3454 2111 00000 000 0 1 24666678777655
Q ss_pred CCCccEEEEecCChhh--------------HHHHHHHhhCC-CCcEEEEecCCCCHHHHHHHHHHHHhCC
Q 007482 70 HPMADVFINFSSFRSA--------------AASSMAALKQP-TIRVVAIIAEGVPEADTKQLIAYARSNN 124 (602)
Q Consensus 70 ~p~vDlavi~vp~~~~--------------~~~~~e~~~~~-gv~~~viis~Gf~E~~~~~l~~~a~~~g 124 (602)
+.|+++++||.+.. +..+.+.+.+. .-..+||..|..+....+++.+...+.+
T Consensus 82 --~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~ 149 (467)
T 2q3e_A 82 --EADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANT 149 (467)
T ss_dssp --HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTC
T ss_pred --cCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhC
Confidence 37999999986442 23455544421 2234566555555444556777766654
No 221
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=69.27 E-value=17 Score=35.32 Aligned_cols=90 Identities=11% Similarity=-0.058 Sum_probs=49.8
Q ss_pred CcEEEEeeCCcH----HHHHHHhc-CCeEEEEEeCCCCCCcccccc--Ccee--ecccccCCHHHHhhcCCCccEEEEec
Q 007482 10 TTQALFYNYKQL----PIQRMLDF-DFLCVAGIINPGAEGFQKLFF--GQEE--IAIPVHSTVEAACAAHPMADVFINFS 80 (602)
Q Consensus 10 ~s~avv~g~~~~----~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~--g~~v--~G~~~y~sv~~i~~~~p~vDlavi~v 80 (602)
|++.|.| .+|. +++.|.+. |++++...-.|.+. ..+. +-++ ..+.-..++.++.. .+|.+|.+.
T Consensus 1 M~ilVtG-atG~iG~~l~~~L~~~~g~~V~~~~R~~~~~---~~~~~~~v~~~~~D~~d~~~l~~~~~---~~d~vi~~a 73 (289)
T 3e48_A 1 MNIMLTG-ATGHLGTHITNQAIANHIDHFHIGVRNVEKV---PDDWRGKVSVRQLDYFNQESMVEAFK---GMDTVVFIP 73 (289)
T ss_dssp CCEEEET-TTSHHHHHHHHHHHHTTCTTEEEEESSGGGS---CGGGBTTBEEEECCTTCHHHHHHHTT---TCSEEEECC
T ss_pred CEEEEEc-CCchHHHHHHHHHhhCCCCcEEEEECCHHHH---HHhhhCCCEEEEcCCCCHHHHHHHHh---CCCEEEEeC
Confidence 3566664 4433 77777776 88875443323221 1110 1111 12222234444443 489988876
Q ss_pred CCh-------hhHHHHHHHhhCCCCcEEEEecC
Q 007482 81 SFR-------SAAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 81 p~~-------~~~~~~~e~~~~~gv~~~viis~ 106 (602)
+.. .....++++|.+.|++.+|.+|+
T Consensus 74 ~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 74 SIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 542 22357888998899998888876
No 222
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=69.22 E-value=4.2 Score=40.01 Aligned_cols=97 Identities=6% Similarity=-0.046 Sum_probs=54.9
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeeccc--ccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIP--VHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~--~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
++++||| |..|. +.+.+.+.|+++ .+++ +... +.+.+ .-.|++ .+.++.++ + +.|++++++|+..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V-~~~~-~~~~-~~~~~---~~~g~~~~~~~~~~~~-~---~~D~vi~av~~~~- 69 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYL-IGVS-RQQS-TCEKA---VERQLVDEAGQDLSLL-Q---TAKIIFLCTPIQL- 69 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEEC-SCHH-HHHHH---HHTTSCSEEESCGGGG-T---TCSEEEECSCHHH-
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEE-EEEE-CCHH-HHHHH---HhCCCCccccCCHHHh-C---CCCEEEEECCHHH-
Confidence 3688886 33333 777888888875 3444 3211 01111 012332 46677776 4 4899999999864
Q ss_pred HHHHHHHhhCC-CCcEEEEecCCCCHHHHHHHH
Q 007482 86 AASSMAALKQP-TIRVVAIIAEGVPEADTKQLI 117 (602)
Q Consensus 86 ~~~~~e~~~~~-gv~~~viis~Gf~E~~~~~l~ 117 (602)
...+++++... .-..+|+-.++.+....+++.
T Consensus 70 ~~~~~~~l~~~~~~~~~vv~~~~~~~~~~~~~~ 102 (279)
T 2f1k_A 70 ILPTLEKLIPHLSPTAIVTDVASVKTAIAEPAS 102 (279)
T ss_dssp HHHHHHHHGGGSCTTCEEEECCSCCHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCEEEECCCCcHHHHHHHH
Confidence 67777776531 223455555667654444443
No 223
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=69.03 E-value=15 Score=33.45 Aligned_cols=90 Identities=13% Similarity=0.065 Sum_probs=48.6
Q ss_pred CcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccccCcee----ecccccCCHHHHhhcCCCccEEEEecC
Q 007482 10 TTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEE----IAIPVHSTVEAACAAHPMADVFINFSS 81 (602)
Q Consensus 10 ~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v----~G~~~y~sv~~i~~~~p~vDlavi~vp 81 (602)
+++.|.| .+|. +++.|++.|++++.....+.+. .......+ ..+.-..++.++.+ ++|.+|.+..
T Consensus 4 ~~ilVtG-atG~iG~~l~~~l~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFG-ATGQTGLTTLAQAVQAGYEVTVLVRDSSRL---PSEGPRPAHVVVGDVLQAADVDKTVA---GQDAVIVLLG 76 (206)
T ss_dssp CEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCGGGS---CSSSCCCSEEEESCTTSHHHHHHHHT---TCSEEEECCC
T ss_pred CEEEEEc-CCcHHHHHHHHHHHHCCCeEEEEEeChhhc---ccccCCceEEEEecCCCHHHHHHHHc---CCCEEEECcc
Confidence 5566664 4333 7888888899864333212111 00000111 12222334555443 4798887765
Q ss_pred Chh----------hHHHHHHHhhCCCCcEEEEecC
Q 007482 82 FRS----------AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 82 ~~~----------~~~~~~e~~~~~gv~~~viis~ 106 (602)
... ....++++|.+.+++.+|.+|+
T Consensus 77 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 432 1456777787778888887776
No 224
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=68.61 E-value=10 Score=40.72 Aligned_cols=107 Identities=13% Similarity=0.057 Sum_probs=63.2
Q ss_pred cEEEEe-eCCcH-HHHHHHhcCCeEEEEEeC-CCCCCccccccCce-------e----------ecccccCCHHHHhhcC
Q 007482 11 TQALFY-NYKQL-PIQRMLDFDFLCVAGIIN-PGAEGFQKLFFGQE-------E----------IAIPVHSTVEAACAAH 70 (602)
Q Consensus 11 s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~-p~~~~~~~~~~g~~-------v----------~G~~~y~sv~~i~~~~ 70 (602)
.+++|| |.-|. ...+|.+.|++++ +++. +.+ .+.+...+ + ..+.+-.+++++..
T Consensus 10 ~~~vIGlG~vG~~~A~~La~~G~~V~-~~D~~~~k---v~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~-- 83 (446)
T 4a7p_A 10 RIAMIGTGYVGLVSGACFSDFGHEVV-CVDKDARK---IELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVK-- 83 (446)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEE-EECSCSTT---HHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHT--
T ss_pred EEEEEcCCHHHHHHHHHHHHCCCEEE-EEeCCHHH---HHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHh--
Confidence 577886 44455 6667777899863 4431 311 11111000 0 12456677877665
Q ss_pred CCccEEEEecCChh----------hHHHHHHHhhC-CCCcEEEEecCCCCHHHHHHHHHHHHhCC
Q 007482 71 PMADVFINFSSFRS----------AAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNN 124 (602)
Q Consensus 71 p~vDlavi~vp~~~----------~~~~~~e~~~~-~gv~~~viis~Gf~E~~~~~l~~~a~~~g 124 (602)
+.|+++++||.+. .+.++.+.+.+ ..-..+||..|+++....+++.+..++.+
T Consensus 84 -~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~ 147 (446)
T 4a7p_A 84 -DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVA 147 (446)
T ss_dssp -TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHS
T ss_pred -cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhC
Confidence 4799999987653 36666666552 22345777788888766677777766653
No 225
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=68.37 E-value=29 Score=32.26 Aligned_cols=90 Identities=11% Similarity=0.104 Sum_probs=49.7
Q ss_pred CcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccccCcee--ecccc-cCCHHHHhhcCCCccEEEEecCC
Q 007482 10 TTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEE--IAIPV-HSTVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 10 ~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v--~G~~~-y~sv~~i~~~~p~vDlavi~vp~ 82 (602)
|++.|. |.+|. +++.|++.|++++.-...+.+. +...+-++ ..+.- ..++.++.+ ++|.+|.+...
T Consensus 1 M~ilIt-GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~---~~d~vi~~ag~ 73 (219)
T 3dqp_A 1 MKIFIV-GSTGRVGKSLLKSLSTTDYQIYAGARKVEQV---PQYNNVKAVHFDVDWTPEEMAKQLH---GMDAIINVSGS 73 (219)
T ss_dssp CEEEEE-STTSHHHHHHHHHHTTSSCEEEEEESSGGGS---CCCTTEEEEECCTTSCHHHHHTTTT---TCSEEEECCCC
T ss_pred CeEEEE-CCCCHHHHHHHHHHHHCCCEEEEEECCccch---hhcCCceEEEecccCCHHHHHHHHc---CCCEEEECCcC
Confidence 345555 44433 8888888999875333222211 11111111 11111 223343333 48999887754
Q ss_pred hh---------hHHHHHHHhhCCCCcEEEEecC
Q 007482 83 RS---------AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 83 ~~---------~~~~~~e~~~~~gv~~~viis~ 106 (602)
.. ....++++|.+.|++.+|.+|+
T Consensus 74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 74 GGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp TTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 21 1456888888889998888887
No 226
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=68.00 E-value=9.1 Score=39.28 Aligned_cols=47 Identities=13% Similarity=0.212 Sum_probs=31.8
Q ss_pred cccccCCHHHHhhcCCCccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCCC
Q 007482 56 AIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGV 108 (602)
Q Consensus 56 G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf 108 (602)
++++|.+..++.. ++|++++++|.......+ +.+.++|.+ + +++..+
T Consensus 66 ~~~v~~d~~~l~~---~vDvV~~aTp~~~h~~~a-~~~l~aGk~-V-i~sap~ 112 (334)
T 2czc_A 66 GFEVAGTLNDLLE---KVDIIVDATPGGIGAKNK-PLYEKAGVK-A-IFQGGE 112 (334)
T ss_dssp TCCCSCBHHHHHT---TCSEEEECCSTTHHHHHH-HHHHHHTCE-E-EECTTS
T ss_pred ceEEcCcHHHhcc---CCCEEEECCCccccHHHH-HHHHHcCCc-e-Eeeccc
Confidence 3478889998764 589999999986434444 455557854 4 456554
No 227
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=67.76 E-value=52 Score=32.22 Aligned_cols=43 Identities=7% Similarity=0.116 Sum_probs=28.8
Q ss_pred CCHHHHhhcCCCccEEEEecCChh-----------------hHHHHHHHhhCCCCcEEEEecC
Q 007482 61 STVEAACAAHPMADVFINFSSFRS-----------------AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 61 ~sv~~i~~~~p~vDlavi~vp~~~-----------------~~~~~~e~~~~~gv~~~viis~ 106 (602)
.++.++.+ ++|.+|-+..... ....++++|.+.|++.+|.+|+
T Consensus 55 ~~~~~~~~---~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 55 DDIKDYLK---GAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp SCCHHHHT---TCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHhc---CCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 56666654 4799886654210 1224678888889998988887
No 228
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=67.66 E-value=35 Score=31.67 Aligned_cols=88 Identities=15% Similarity=-0.055 Sum_probs=49.4
Q ss_pred EEEeeCCcH----HHHHHH-hcCCeEEEEEeCCC-CCCccccc--cCceee----cccccCCHHHHhhcCCCccEEEEec
Q 007482 13 ALFYNYKQL----PIQRML-DFDFLCVAGIINPG-AEGFQKLF--FGQEEI----AIPVHSTVEAACAAHPMADVFINFS 80 (602)
Q Consensus 13 avv~g~~~~----~~~~~~-~~g~~~V~gv~~p~-~~~~~~~~--~g~~v~----G~~~y~sv~~i~~~~p~vDlavi~v 80 (602)
++|-|.+|. +++.|+ +.|++++.-...+. + .+.+ .+..+. .+.-..++.++.+ ++|.+|.+.
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vv~~a 81 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTR---IPPEIIDHERVTVIEGSFQNPGXLEQAVT---NAEVVFVGA 81 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHH---SCHHHHTSTTEEEEECCTTCHHHHHHHHT---TCSEEEESC
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcccc---chhhccCCCceEEEECCCCCHHHHHHHHc---CCCEEEEcC
Confidence 555554443 778888 78998643322122 1 1111 111221 2222344555544 489999877
Q ss_pred CChh-hHHHHHHHhhCCCCcEEEEecC
Q 007482 81 SFRS-AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 81 p~~~-~~~~~~e~~~~~gv~~~viis~ 106 (602)
.... ....+++.|.+.|++.+|.+|+
T Consensus 82 g~~n~~~~~~~~~~~~~~~~~iv~iSs 108 (221)
T 3r6d_A 82 MESGSDMASIVKALSRXNIRRVIGVSM 108 (221)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCChhHHHHHHHHHhcCCCeEEEEee
Confidence 5421 1456788888889998888876
No 229
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=67.25 E-value=4.6 Score=39.28 Aligned_cols=79 Identities=11% Similarity=0.021 Sum_probs=45.3
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCC-----c--------cccccCceeecccccCCHHHHhhcCC
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEG-----F--------QKLFFGQEEIAIPVHSTVEAACAAHP 71 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~-----~--------~~~~~g~~v~G~~~y~sv~~i~~~~p 71 (602)
+..++++||| |..|. +.++|.+.|++++ ..+ ..... . ...+. +-.|...+.+..|+...
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~-~~~-r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~e~~~~-- 90 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVT-IGT-RDPKATLARAEPDAMGAPPFSQWL--PEHPHVHLAAFADVAAG-- 90 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEE-SCHHHHHTCC-------CCHHHHG--GGSTTCEEEEHHHHHHH--
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEE-EEe-CChhhhhhhhhhhhhcchhhhHHH--hhcCceeccCHHHHHhc--
Confidence 4567899996 33344 7888888999863 333 21110 0 00010 01234456788887653
Q ss_pred CccEEEEecCChhhHHHHHHHh
Q 007482 72 MADVFINFSSFRSAAASSMAAL 93 (602)
Q Consensus 72 ~vDlavi~vp~~~~~~~~~e~~ 93 (602)
.|++|++||+.. ...+++++
T Consensus 91 -aDvVilavp~~~-~~~~~~~i 110 (245)
T 3dtt_A 91 -AELVVNATEGAS-SIAALTAA 110 (245)
T ss_dssp -CSEEEECSCGGG-HHHHHHHH
T ss_pred -CCEEEEccCcHH-HHHHHHHh
Confidence 699999999975 44555544
No 230
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=66.67 E-value=3.9 Score=33.96 Aligned_cols=102 Identities=11% Similarity=0.003 Sum_probs=54.0
Q ss_pred CcEEEEeeCC--cH-HHHHHHhcC-CeEEEEEeCCCCCCccccc--cCcee--ecccccCCHHHHhhcCCCccEEEEecC
Q 007482 10 TTQALFYNYK--QL-PIQRMLDFD-FLCVAGIINPGAEGFQKLF--FGQEE--IAIPVHSTVEAACAAHPMADVFINFSS 81 (602)
Q Consensus 10 ~s~avv~g~~--~~-~~~~~~~~g-~~~V~gv~~p~~~~~~~~~--~g~~v--~G~~~y~sv~~i~~~~p~vDlavi~vp 81 (602)
++++|+| .+ |+ +++.+.+.| ++++ .+. .... +.+.+ .+-+. ..+.-..++.++.. ++|++|.++|
T Consensus 6 ~~v~I~G-~G~iG~~~~~~l~~~g~~~v~-~~~-r~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~~~ 78 (118)
T 3ic5_A 6 WNICVVG-AGKIGQMIAALLKTSSNYSVT-VAD-HDLA-ALAVLNRMGVATKQVDAKDEAGLAKALG---GFDAVISAAP 78 (118)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHCSSEEEE-EEE-SCHH-HHHHHHTTTCEEEECCTTCHHHHHHHTT---TCSEEEECSC
T ss_pred CeEEEEC-CCHHHHHHHHHHHhCCCceEE-EEe-CCHH-HHHHHHhCCCcEEEecCCCHHHHHHHHc---CCCEEEECCC
Confidence 3566665 43 22 777888888 7653 333 2111 00111 01111 11222233444433 4899999998
Q ss_pred ChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHh
Q 007482 82 FRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARS 122 (602)
Q Consensus 82 ~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~ 122 (602)
... ...+.+.|.+.|++.+. +++-. + ..+++.+++++
T Consensus 79 ~~~-~~~~~~~~~~~g~~~~~-~~~~~-~-~~~~~~~~~~~ 115 (118)
T 3ic5_A 79 FFL-TPIIAKAAKAAGAHYFD-LTEDV-A-ATNAVRALVED 115 (118)
T ss_dssp GGG-HHHHHHHHHHTTCEEEC-CCSCH-H-HHHHHHHHHHC
T ss_pred chh-hHHHHHHHHHhCCCEEE-ecCcH-H-HHHHHHHHHHh
Confidence 764 67888889889998554 34322 2 34455555544
No 231
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=65.94 E-value=3.2 Score=42.75 Aligned_cols=106 Identities=11% Similarity=0.059 Sum_probs=59.6
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-++++||| |..|+ +.+.+..+|++++ +.+ +.... +.. .-.|+. +.++.++... .|++++++|...
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d-~~~~~--~~~---~~~g~~-~~~l~~~l~~---aDvVil~vp~~~ 216 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGFNMRIL-YYS-RTRKE--EVE---RELNAE-FKPLEDLLRE---SDFVVLAVPLTR 216 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SSCCH--HHH---HHHCCE-ECCHHHHHHH---CSEEEECCCCCT
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCEEE-EEC-CCcch--hhH---hhcCcc-cCCHHHHHhh---CCEEEECCCCCh
Confidence 4557899996 43344 7778888999853 444 42211 000 112443 3588887663 699999999864
Q ss_pred hH-----HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~-----~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
.. ...++.+. .| .++|-++--+..+++.|.+..++..+.
T Consensus 217 ~t~~~i~~~~~~~mk-~~--ailIn~srg~~v~~~aL~~aL~~~~i~ 260 (334)
T 2dbq_A 217 ETYHLINEERLKLMK-KT--AILINIARGKVVDTNALVKALKEGWIA 260 (334)
T ss_dssp TTTTCBCHHHHHHSC-TT--CEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred HHHHhhCHHHHhcCC-CC--cEEEECCCCcccCHHHHHHHHHhCCee
Confidence 22 23344443 33 334333322223566777777775443
No 232
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=65.41 E-value=18 Score=34.38 Aligned_cols=91 Identities=13% Similarity=0.092 Sum_probs=47.7
Q ss_pred CcEEEEeeCCcH----HHHHHHhcC-CeEEEEEeCCCCCCccccccCceee----cccccCCHHHHhhcCCCccEEEEec
Q 007482 10 TTQALFYNYKQL----PIQRMLDFD-FLCVAGIINPGAEGFQKLFFGQEEI----AIPVHSTVEAACAAHPMADVFINFS 80 (602)
Q Consensus 10 ~s~avv~g~~~~----~~~~~~~~g-~~~V~gv~~p~~~~~~~~~~g~~v~----G~~~y~sv~~i~~~~p~vDlavi~v 80 (602)
+.+++|-|.+|. +++.|++.| ++++.-.-.+.+. +......+. .+.-..++.++.+ .+|.+|.+.
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~D~vv~~a 96 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI---HKPYPTNSQIIMGDVLNHAALKQAMQ---GQDIVYANL 96 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS---CSSCCTTEEEEECCTTCHHHHHHHHT---TCSEEEEEC
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh---cccccCCcEEEEecCCCHHHHHHHhc---CCCEEEEcC
Confidence 345666665544 788888888 7764222212111 111111111 1222233444443 378887666
Q ss_pred CChh---hHHHHHHHhhCCCCcEEEEecC
Q 007482 81 SFRS---AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 81 p~~~---~~~~~~e~~~~~gv~~~viis~ 106 (602)
.... ....+++.|.+.|++.+|.+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 97 TGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp CSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 5432 1345677777778888887776
No 233
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=65.30 E-value=6.2 Score=41.59 Aligned_cols=59 Identities=12% Similarity=0.067 Sum_probs=34.3
Q ss_pred cccCCHHHHhhcCCCccEEEEecCChh----------hHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHH
Q 007482 58 PVHSTVEAACAAHPMADVFINFSSFRS----------AAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAY 119 (602)
Q Consensus 58 ~~y~sv~~i~~~~p~vDlavi~vp~~~----------~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~ 119 (602)
....+..+... +.|+++++||... .+.++++.+...+-..+||..+..+....+++.+.
T Consensus 62 ~~t~~~~~~~~---~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~ 130 (402)
T 1dlj_A 62 KATLDSKAAYK---EAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQK 130 (402)
T ss_dssp EEESCHHHHHH---HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHH
T ss_pred EEeCCHHHHhc---CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHH
Confidence 44556666554 3799999999873 36677776653233456665343433334455443
No 234
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=64.82 E-value=1.9 Score=45.73 Aligned_cols=78 Identities=10% Similarity=-0.039 Sum_probs=45.1
Q ss_pred cEEEEe-eCCcH-HHHHHHhcCCeEEEEEeC-CCCCCccccccCceeecccccCCHHHHhh-cCCCccEEEEecCChhhH
Q 007482 11 TQALFY-NYKQL-PIQRMLDFDFLCVAGIIN-PGAEGFQKLFFGQEEIAIPVHSTVEAACA-AHPMADVFINFSSFRSAA 86 (602)
Q Consensus 11 s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~-p~~~~~~~~~~g~~v~G~~~y~sv~~i~~-~~p~vDlavi~vp~~~~~ 86 (602)
.++|+| |-.|+ +++.+...||++|+-++- |.+. |.++.|+|+|.. .++.. ...+++.++|++...
T Consensus 54 ~v~IiGAG~~G~~l~~~l~~~g~~ivgfiDdd~~~~-------g~~i~GipV~~~-~~l~~~~~~~~~~viiai~~r--- 122 (409)
T 2py6_A 54 RLVILGTKGFGAHLMNVRHERPCEVIAAVDDFRYHS-------GELYYGLPIIST-DRFTELATHDRDLVALNTCRY--- 122 (409)
T ss_dssp EEEEECSSSTHHHHHSCSSSCSSEEEEEECTTTTTS-------CCEETTEEEECH-HHHHHHHHTCTTEEEEECCCS---
T ss_pred eEEEEeCCHHHHHHHHHHHHCCCEEEEEEeCCcccc-------cCEECCEEEECH-HHHHHHHhCCCCEEEEeccHH---
Confidence 455664 23344 334344467888877763 3332 367999999975 55543 122478888888332
Q ss_pred HHHHHHhhCCCCc
Q 007482 87 ASSMAALKQPTIR 99 (602)
Q Consensus 87 ~~~~e~~~~~gv~ 99 (602)
..+.+.|.+.|++
T Consensus 123 ~~i~~~l~~~g~~ 135 (409)
T 2py6_A 123 DGPKRFFDQICRT 135 (409)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCC
Confidence 4555666555544
No 235
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=64.18 E-value=9.6 Score=37.19 Aligned_cols=72 Identities=15% Similarity=0.257 Sum_probs=47.8
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCc---HHHHHH
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRD---EYSLVE 236 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~---~~~f~~ 236 (602)
..++|++|.-+|.+...+.+. +.+.|+.+.+ ++.|+|++|+.-.+.+ ..+..+
T Consensus 6 ~~~~V~vI~i~g~I~~~~~~~-----------------------l~~~l~~a~~-~~~~~Ivl~inspGG~v~~~~~i~~ 61 (230)
T 3viv_A 6 AKNIVYVAQIKGQITSYTYDQ-----------------------FDRYITIAEQ-DNAEAIIIELDTPGGRADAMMNIVQ 61 (230)
T ss_dssp CCCEEEEEEEESCBCHHHHHH-----------------------HHHHHHHHHH-TTCSEEEEEEEBSCEEHHHHHHHHH
T ss_pred CCCeEEEEEEeCEECHHHHHH-----------------------HHHHHHHHhc-CCCCEEEEEEeCCCcCHHHHHHHHH
Confidence 456788888888776654432 3455666665 4699999999822233 344555
Q ss_pred HHHhcCCCCCEEEEE---eCcCcc
Q 007482 237 ALKQGKVNKPVVAWV---SGTCAR 257 (602)
Q Consensus 237 ~~r~~~~~KPVv~~k---~Gr~~~ 257 (602)
.+++ .+||||++. .|...+
T Consensus 62 ~i~~--~~~PVia~v~p~~G~Aas 83 (230)
T 3viv_A 62 RIQQ--SKIPVIIYVYPPGASAAS 83 (230)
T ss_dssp HHHT--CSSCEEEEECSTTCEEET
T ss_pred HHHh--CCCCEEEEEecCCCEEhH
Confidence 5554 689999999 665443
No 236
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=64.17 E-value=3 Score=43.02 Aligned_cols=110 Identities=8% Similarity=0.002 Sum_probs=61.3
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ +.+++..+|++++ +.+ |..... + . ..-.|.. |.++.++... .|++++++|...
T Consensus 143 l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~-~~d-~~~~~~-~-~--~~~~g~~-~~~l~ell~~---aDvV~l~~P~t~ 212 (330)
T 4e5n_A 143 LDNATVGFLGMGAIGLAMADRLQGWGATLQ-YHE-AKALDT-Q-T--EQRLGLR-QVACSELFAS---SDFILLALPLNA 212 (330)
T ss_dssp STTCEEEEECCSHHHHHHHHHTTTSCCEEE-EEC-SSCCCH-H-H--HHHHTEE-ECCHHHHHHH---CSEEEECCCCST
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EEC-CCCCcH-h-H--HHhcCce-eCCHHHHHhh---CCEEEEcCCCCH
Confidence 3456888886 44444 7778888999854 454 422110 0 0 0122443 4589998764 699999999532
Q ss_pred hHHHHH--HHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~~~~~--e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
....++ +.....+-..++|-++--+-.+++.|.+..++.+++
T Consensus 213 ~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~ 256 (330)
T 4e5n_A 213 DTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLG 256 (330)
T ss_dssp TTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCcc
Confidence 222222 222222223344433322333788888888887655
No 237
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=63.99 E-value=3.6 Score=42.44 Aligned_cols=105 Identities=11% Similarity=0.011 Sum_probs=61.0
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ +.+++..+|++++ +.+ |..... . +-.|.. |.+++|+..+ .|++++++|...
T Consensus 139 l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~-~~d-~~~~~~---~---~~~g~~-~~~l~ell~~---aDvV~l~~P~t~ 206 (334)
T 2pi1_A 139 LNRLTLGVIGTGRIGSRVAMYGLAFGMKVL-CYD-VVKRED---L---KEKGCV-YTSLDELLKE---SDVISLHVPYTK 206 (334)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SSCCHH---H---HHTTCE-ECCHHHHHHH---CSEEEECCCCCT
T ss_pred ccCceEEEECcCHHHHHHHHHHHHCcCEEE-EEC-CCcchh---h---HhcCce-ecCHHHHHhh---CCEEEEeCCCCh
Confidence 3446788886 44444 7788888999864 444 422210 0 012443 4568888764 699999999632
Q ss_pred hH-----HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 85 AA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 85 ~~-----~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
.. ...++.+. -..++|=++--+-.+++.|.+..++..+.
T Consensus 207 ~t~~li~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~~g~i~ 250 (334)
T 2pi1_A 207 ETHHMINEERISLMK---DGVYLINTARGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp TTTTCBCHHHHHHSC---TTEEEEECSCGGGBCHHHHHHHHHTTCEE
T ss_pred HHHHhhCHHHHhhCC---CCcEEEECCCCcccCHHHHHHHHHhCCce
Confidence 12 23444443 23344434322233788888888877655
No 238
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=63.97 E-value=12 Score=37.87 Aligned_cols=105 Identities=5% Similarity=-0.047 Sum_probs=53.4
Q ss_pred CccCCCCCCCcEEEEeeCC--cH-HHHHHHhcCCeEEEEEeCCCCCCccc-cc-cCcee----ecccccCCHHHHhhcCC
Q 007482 1 MATGQLFSKTTQALFYNYK--QL-PIQRMLDFDFLCVAGIINPGAEGFQK-LF-FGQEE----IAIPVHSTVEAACAAHP 71 (602)
Q Consensus 1 ~~~~~l~~p~s~avv~g~~--~~-~~~~~~~~g~~~V~gv~~p~~~~~~~-~~-~g~~v----~G~~~y~sv~~i~~~~p 71 (602)
|+....+..+++.|.||.+ |+ +++.|++.|++++.-...+.+..... .+ .+..+ ..+.-..++.++.+..
T Consensus 1 mi~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 79 (357)
T 1rkx_A 1 MINNSFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF- 79 (357)
T ss_dssp -CCHHHHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-
T ss_pred CCCchhhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-
Confidence 5555556667666665322 33 77888889998753332122211000 00 00011 1223334455554432
Q ss_pred CccEEEEecCChh-----------------hHHHHHHHhhCCC-CcEEEEecC
Q 007482 72 MADVFINFSSFRS-----------------AAASSMAALKQPT-IRVVAIIAE 106 (602)
Q Consensus 72 ~vDlavi~vp~~~-----------------~~~~~~e~~~~~g-v~~~viis~ 106 (602)
++|.+|-+..... ....++++|.+.+ ++.+|.+|+
T Consensus 80 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 80 QPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred CCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 2799887764211 0123677777655 888888887
No 239
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=63.96 E-value=3.1 Score=42.86 Aligned_cols=108 Identities=9% Similarity=0.047 Sum_probs=60.6
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+.-+++.||| |..|+ +.+.+..+|++++ +.+ +....+ . ..-.|+. +.++.++..+ .|++++++|...
T Consensus 144 l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~-~~d-~~~~~~--~---~~~~g~~-~~~l~e~l~~---aDiVil~vp~~~ 212 (333)
T 2d0i_A 144 LYGKKVGILGMGAIGKAIARRLIPFGVKLY-YWS-RHRKVN--V---EKELKAR-YMDIDELLEK---SDIVILALPLTR 212 (333)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGTCEEE-EEC-SSCCHH--H---HHHHTEE-ECCHHHHHHH---CSEEEECCCCCT
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEE-EEC-CCcchh--h---hhhcCce-ecCHHHHHhh---CCEEEEcCCCCh
Confidence 5567899996 44444 7777888999853 444 422110 0 0112343 3478887663 699999999862
Q ss_pred hHH-----HHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 85 AAA-----SSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 85 ~~~-----~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
... ..++.+. .| .+|-++.| ...++++|.+..++..++-.|
T Consensus 213 ~t~~~i~~~~~~~mk-~g--ilin~srg-~~vd~~aL~~aL~~~~i~gag 258 (333)
T 2d0i_A 213 DTYHIINEERVKKLE-GK--YLVNIGRG-ALVDEKAVTEAIKQGKLKGYA 258 (333)
T ss_dssp TTTTSBCHHHHHHTB-TC--EEEECSCG-GGBCHHHHHHHHHTTCBCEEE
T ss_pred HHHHHhCHHHHhhCC-CC--EEEECCCC-cccCHHHHHHHHHcCCceEEE
Confidence 122 2344444 44 33333333 223566777777775555444
No 240
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=63.91 E-value=9.9 Score=38.45 Aligned_cols=99 Identities=16% Similarity=0.098 Sum_probs=53.4
Q ss_pred CCCCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCC------CC-ccccccCceeecccccCCHHHHhhcCCCccE
Q 007482 5 QLFSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGA------EG-FQKLFFGQEEIAIPVHSTVEAACAAHPMADV 75 (602)
Q Consensus 5 ~l~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~------~~-~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDl 75 (602)
.-|++++++||| |.-|. ....|.+.|+++. .+..+.. .+ ....-.+.....+++..+.+++ + +.|+
T Consensus 15 ~~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~-l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~-~---~~D~ 89 (318)
T 3hwr_A 15 LYFQGMKVAIMGAGAVGCYYGGMLARAGHEVI-LIARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSAV-Q---GADL 89 (318)
T ss_dssp -----CEEEEESCSHHHHHHHHHHHHTTCEEE-EECCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGGG-T---TCSE
T ss_pred hhccCCcEEEECcCHHHHHHHHHHHHCCCeEE-EEEcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHc-C---CCCE
Confidence 458889999997 33344 6666777888752 1111210 00 0000001112234455666553 2 4799
Q ss_pred EEEecCChhhHHHHHHHhhCCCC---cEEEEecCCCCH
Q 007482 76 FINFSSFRSAAASSMAALKQPTI---RVVAIIAEGVPE 110 (602)
Q Consensus 76 avi~vp~~~~~~~~~e~~~~~gv---~~~viis~Gf~E 110 (602)
+|++||+. .+.++++.+.. -+ ..+|.++.|+..
T Consensus 90 vilavk~~-~~~~~l~~l~~-~l~~~~~iv~~~nGi~~ 125 (318)
T 3hwr_A 90 VLFCVKST-DTQSAALAMKP-ALAKSALVLSLQNGVEN 125 (318)
T ss_dssp EEECCCGG-GHHHHHHHHTT-TSCTTCEEEEECSSSSH
T ss_pred EEEEcccc-cHHHHHHHHHH-hcCCCCEEEEeCCCCCc
Confidence 99999997 47888888763 22 246667889975
No 241
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=63.44 E-value=5.8 Score=40.92 Aligned_cols=102 Identities=9% Similarity=-0.048 Sum_probs=56.3
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhc---------CCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEE
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDF---------DFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFI 77 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~---------g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlav 77 (602)
+.+++|+| |.-|+ +++.+.+. +.++++..+ .... +.+ .+..-..|.+.+++. ++|++|
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d-~~~~-~~~-----~~~~~~~~~d~~~ll----~iDvVv 71 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLV-RDPR-KPR-----AIPQELLRAEPFDLL----EADLVV 71 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEEC-SCTT-SCC-----SSCGGGEESSCCCCT----TCSEEE
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEE-CCHH-Hhh-----ccCcccccCCHHHHh----CCCEEE
Confidence 45678885 33344 66666553 345554433 2211 111 111234677888776 389999
Q ss_pred EecCChhhHHHHHHHhhCCCCcEEEEecCC-CCHHHHHHHHHHHHhC
Q 007482 78 NFSSFRSAAASSMAALKQPTIRVVAIIAEG-VPEADTKQLIAYARSN 123 (602)
Q Consensus 78 i~vp~~~~~~~~~e~~~~~gv~~~viis~G-f~E~~~~~l~~~a~~~ 123 (602)
+++|.........++|-++|.. +|+-... +. ..-++|.++|+++
T Consensus 72 e~t~~~~~a~~~~~~AL~aGKh-VVtaNkkpla-~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 72 EAMGGVEAPLRLVLPALEAGIP-LITANKALLA-EAWESLRPFAEEG 116 (332)
T ss_dssp ECCCCSHHHHHHHHHHHHTTCC-EEECCHHHHH-HSHHHHHHHHHTT
T ss_pred ECCCCcHHHHHHHHHHHHcCCe-EEECCchhHH-HHHHHHHHHHHhC
Confidence 9999763333344444447875 4431111 11 2568899999988
No 242
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=63.03 E-value=7.6 Score=42.00 Aligned_cols=108 Identities=14% Similarity=0.041 Sum_probs=60.4
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccc-------c--C-ce-e------ecccccCCHHHHhhc
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLF-------F--G-QE-E------IAIPVHSTVEAACAA 69 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~-------~--g-~~-v------~G~~~y~sv~~i~~~ 69 (602)
.++|+||| |.-|. ....|.+.|++++ +++ .... +.+.+ + | ++ + ..+.+..++++...
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~-~~d-~~~~-~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~- 83 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVF-CLD-VDQA-KIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVA- 83 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SCHH-HHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHH-
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEE-EEE-CCHH-HHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhh-
Confidence 46899997 44455 5566777899853 444 2110 00000 0 1 00 0 02455566766554
Q ss_pred CCCccEEEEecCCh---------hhHHHHHHHhhC-CCCcEEEEecCCCCHHHHHHHHHHHHh
Q 007482 70 HPMADVFINFSSFR---------SAAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARS 122 (602)
Q Consensus 70 ~p~vDlavi~vp~~---------~~~~~~~e~~~~-~gv~~~viis~Gf~E~~~~~l~~~a~~ 122 (602)
+.|+++++||.+ ..+.++++.+.. ..-..+||..|+++....+++.+...+
T Consensus 84 --~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~ 144 (478)
T 2y0c_A 84 --HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAE 144 (478)
T ss_dssp --HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred --cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHH
Confidence 379999999983 346777776653 223466777778865444455555544
No 243
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=62.84 E-value=7.3 Score=42.06 Aligned_cols=60 Identities=13% Similarity=0.151 Sum_probs=40.6
Q ss_pred CHHHHhhcCCCccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE
Q 007482 62 TVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 128 (602)
Q Consensus 62 sv~~i~~~~p~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii 128 (602)
++.++.. ++|++|.++|... ...+.++|.+.|+..+ . .+-+.+ ...++.+.|++.|++++
T Consensus 81 ~l~~~l~---~~DvVIn~tp~~~-~~~v~~a~l~~g~~vv-d-~~~~~p-~~~~Ll~~Ak~aGv~~i 140 (467)
T 2axq_A 81 ALDKVLA---DNDVVISLIPYTF-HPNVVKSAIRTKTDVV-T-SSYISP-ALRELEPEIVKAGITVM 140 (467)
T ss_dssp HHHHHHH---TSSEEEECSCGGG-HHHHHHHHHHHTCEEE-E-CSCCCH-HHHHHHHHHHHHTCEEE
T ss_pred HHHHHHc---CCCEEEECCchhh-hHHHHHHHHhcCCEEE-E-eecCCH-HHHHHHHHHHHcCCEEE
Confidence 4555544 4899999998764 4556777776776533 2 233444 45788899999998765
No 244
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=62.80 E-value=3.6 Score=45.22 Aligned_cols=110 Identities=15% Similarity=0.046 Sum_probs=61.7
Q ss_pred CCCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 6 LFSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 6 l~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
-+.-+++.||| |..|+ +.+.+..+|++++ +.+ |..... . ..-.|.... ++.++... .|++++++|..
T Consensus 139 ~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~-~~d-~~~~~~--~---a~~~g~~~~-~l~e~~~~---aDvV~l~~P~~ 207 (529)
T 1ygy_A 139 EIFGKTVGVVGLGRIGQLVAQRIAAFGAYVV-AYD-PYVSPA--R---AAQLGIELL-SLDDLLAR---ADFISVHLPKT 207 (529)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EEC-TTSCHH--H---HHHHTCEEC-CHHHHHHH---CSEEEECCCCS
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCCCEEE-EEC-CCCChh--H---HHhcCcEEc-CHHHHHhc---CCEEEECCCCc
Confidence 35667899996 43344 7888888999864 454 532110 0 112344444 78887763 69999999986
Q ss_pred hhHHHHHHH--hhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 84 SAAASSMAA--LKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 84 ~~~~~~~e~--~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
.....++.+ ....+-..+++-.+--...++++|.+..++..+.
T Consensus 208 ~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ 252 (529)
T 1ygy_A 208 PETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVR 252 (529)
T ss_dssp TTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEE
T ss_pred hHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCcc
Confidence 233333322 2222222344333322223677788877776443
No 245
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=62.72 E-value=2.3 Score=42.39 Aligned_cols=96 Identities=11% Similarity=-0.025 Sum_probs=48.8
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCcccccc--Cceeec--------ccccCCHHHHhhcCCCccEEE
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFF--GQEEIA--------IPVHSTVEAACAAHPMADVFI 77 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~--g~~v~G--------~~~y~sv~~i~~~~p~vDlav 77 (602)
++++||| |..|. ....|.+.|++++ .++ .... +.+.+. |-.+.+ +++. +..|+.+...+.|+++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~-r~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~vi 79 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVT-LID-QWPA-HIEAIRKNGLIADFNGEEVVANLPIF-SPEEIDHQNEQVDLII 79 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SCHH-HHHHHHHHCEEEEETTEEEEECCCEE-CGGGCCTTSCCCSEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEE-EEE-CCHH-HHHHHHhCCEEEEeCCCeeEecceee-cchhhcccCCCCCEEE
Confidence 5788886 33344 6777888888752 333 2111 000000 111111 1111 2233322111479999
Q ss_pred EecCChhhHHHHHHHhhCC-C-CcEEEEecCCCCH
Q 007482 78 NFSSFRSAAASSMAALKQP-T-IRVVAIIAEGVPE 110 (602)
Q Consensus 78 i~vp~~~~~~~~~e~~~~~-g-v~~~viis~Gf~E 110 (602)
++||+. .+.++++.+... + =+.++.++.|+..
T Consensus 80 ~~v~~~-~~~~v~~~l~~~l~~~~~iv~~~~g~~~ 113 (316)
T 2ew2_A 80 ALTKAQ-QLDAMFKAIQPMITEKTYVLCLLNGLGH 113 (316)
T ss_dssp ECSCHH-HHHHHHHHHGGGCCTTCEEEECCSSSCT
T ss_pred EEeccc-cHHHHHHHHHHhcCCCCEEEEecCCCCc
Confidence 999986 477888877531 1 1245555678863
No 246
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=62.60 E-value=24 Score=34.74 Aligned_cols=96 Identities=13% Similarity=0.086 Sum_probs=50.2
Q ss_pred CCCCCCcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccccCce--eecccccCCHHHHhhcCCCccEEEE
Q 007482 5 QLFSKTTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQE--EIAIPVHSTVEAACAAHPMADVFIN 78 (602)
Q Consensus 5 ~l~~p~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~--v~G~~~y~sv~~i~~~~p~vDlavi 78 (602)
..+.++.+++|.|.+|. +++.|++.|++++.-...+.. . .+ +-+ ...+.-..++.++.... ++|.+|-
T Consensus 7 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~---~l-~~~~~~~Dl~d~~~~~~~~~~~-~~d~vih 80 (321)
T 2pk3_A 7 HHHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K---LP-NVEMISLDIMDSQRVKKVISDI-KPDYIFH 80 (321)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C---CT-TEEEEECCTTCHHHHHHHHHHH-CCSEEEE
T ss_pred ccccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c---cc-eeeEEECCCCCHHHHHHHHHhc-CCCEEEE
Confidence 44566777777776665 778888899987533321211 1 01 101 11223334455555432 3799887
Q ss_pred ecCChh-----------------hHHHHHHHhhCC-CCcEEEEecC
Q 007482 79 FSSFRS-----------------AAASSMAALKQP-TIRVVAIIAE 106 (602)
Q Consensus 79 ~vp~~~-----------------~~~~~~e~~~~~-gv~~~viis~ 106 (602)
+..... ....++++|.+. +++.+|.+|+
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 126 (321)
T 2pk3_A 81 LAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGS 126 (321)
T ss_dssp CCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEE
T ss_pred cCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcc
Confidence 764321 023567777653 6888888876
No 247
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=62.20 E-value=40 Score=32.59 Aligned_cols=88 Identities=8% Similarity=-0.079 Sum_probs=49.2
Q ss_pred CCCCCcEEEEeeCC--cH-HHHHHHhcCCe---EEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEe
Q 007482 6 LFSKTTQALFYNYK--QL-PIQRMLDFDFL---CVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINF 79 (602)
Q Consensus 6 l~~p~s~avv~g~~--~~-~~~~~~~~g~~---~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~ 79 (602)
.++.+++.|.||.+ |+ +++.|++.|+. -..++. . + ...+.-..++.++.+.. ++|.+|-+
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~~~~~-~--------~----~~D~~d~~~~~~~~~~~-~~d~Vih~ 68 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVS-S--------K----DADLTDTAQTRALFEKV-QPTHVIHL 68 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTCCTTCEEEECC-T--------T----TCCTTSHHHHHHHHHHS-CCSEEEEC
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCCcccccccccC-c--------e----ecccCCHHHHHHHHhhc-CCCEEEEC
Confidence 45666776665322 33 77788887761 011111 0 0 11223334566666543 38998876
Q ss_pred cCChh------------------hHHHHHHHhhCCCCcEEEEecCC
Q 007482 80 SSFRS------------------AAASSMAALKQPTIRVVAIIAEG 107 (602)
Q Consensus 80 vp~~~------------------~~~~~~e~~~~~gv~~~viis~G 107 (602)
..... ....++++|.+.|++.+|.+|+.
T Consensus 69 A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~ 114 (319)
T 4b8w_A 69 AAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLST 114 (319)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCG
T ss_pred ceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcch
Confidence 43311 01247899988999988887763
No 248
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=62.20 E-value=13 Score=31.61 Aligned_cols=38 Identities=16% Similarity=0.065 Sum_probs=26.7
Q ss_pred CccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCCCC
Q 007482 72 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 109 (602)
Q Consensus 72 ~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~ 109 (602)
+.|++++++|.......+.+.+.+.+.+.+++.+.+..
T Consensus 69 ~~d~vi~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 106 (140)
T 1lss_A 69 DADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIE 106 (140)
T ss_dssp TCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTT
T ss_pred cCCEEEEeeCCchHHHHHHHHHHHcCCCEEEEEecCHh
Confidence 48999999988654444556666677777777666643
No 249
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=62.16 E-value=11 Score=40.28 Aligned_cols=111 Identities=11% Similarity=0.067 Sum_probs=56.8
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEe-CCCCCCccc-cccCceee--cccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGII-NPGAEGFQK-LFFGQEEI--AIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~-~p~~~~~~~-~~~g~~v~--G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
+++.|+| |..|+ +++.|.+.|+++ ...+ .+.+..+.. .+.+.+.. .+.-+.++.++.. ++|++|.++|..
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G~~V-~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~---~~DvVIn~a~~~ 79 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSGIKV-TVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA---KHDLVISLIPYT 79 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTTCEE-EEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT---TSSEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEE-EEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc---CCcEEEECCccc
Confidence 4566664 23344 777888888875 2333 121110000 01010110 1111234555544 489999999875
Q ss_pred hhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE
Q 007482 84 SAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 128 (602)
Q Consensus 84 ~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii 128 (602)
. ...+.++|.+.|.. ++.. +-+.+ ...++.+.|+++|++++
T Consensus 80 ~-~~~i~~a~l~~g~~-vvd~-~~~~~-~~~~l~~aA~~aGv~~i 120 (450)
T 1ff9_A 80 F-HATVIKSAIRQKKH-VVTT-SYVSP-AMMELDQAAKDAGITVM 120 (450)
T ss_dssp C-HHHHHHHHHHHTCE-EEES-SCCCH-HHHHTHHHHHHTTCEEE
T ss_pred c-chHHHHHHHhCCCe-EEEe-ecccH-HHHHHHHHHHHCCCeEE
Confidence 3 34455666655643 3332 22232 46788999999999855
No 250
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=62.06 E-value=11 Score=37.31 Aligned_cols=94 Identities=19% Similarity=0.125 Sum_probs=63.0
Q ss_pred HHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCee---------------EcCCcccccccCcccccccCCcccc
Q 007482 88 SSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV---------------IGPATVGGIQAGAFKIGDTAGTIDN 152 (602)
Q Consensus 88 ~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~ri---------------iGPNc~G~~~~~~~~l~~~~~~~~~ 152 (602)
.+.|+.. .|..++.+|.+-.+..+.+++.++|++.|+-+ +|+..+|+-|-+-..+ ......
T Consensus 118 QI~eAr~-~GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNRnL~tf---~vdl~~ 193 (258)
T 4a29_A 118 QIDDAYN-LGADTVLLIVKILTERELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIMSRDFETG---EINKEN 193 (258)
T ss_dssp HHHHHHH-HTCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSBCTTTC---CBCHHH
T ss_pred HHHHHHH-cCCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCCCcccc---ccCHHH
Confidence 4556554 79999999999999888889999999999864 4888889866543111 111111
Q ss_pred cccccCCCCCcEEEEecChhHHHHHHHHHHhcC
Q 007482 153 IIHCKLYRPGSVGFVSKSGGMSNELYNTIARVT 185 (602)
Q Consensus 153 ~~p~~~~~~G~valvSQSG~l~~~~~~~~~~~g 185 (602)
.......-|.++-+||-||--+.+=+..+.+.|
T Consensus 194 t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G 226 (258)
T 4a29_A 194 QRKLISMIPSNVVKVAKLGISERNEIEELRKLG 226 (258)
T ss_dssp HHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTT
T ss_pred HHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCC
Confidence 111112346678899999987777666666554
No 251
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=61.89 E-value=6.4 Score=39.55 Aligned_cols=119 Identities=10% Similarity=0.091 Sum_probs=65.0
Q ss_pred CCCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccc--cCCHHHHhhcCCCccEEEEecC
Q 007482 6 LFSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPV--HSTVEAACAAHPMADVFINFSS 81 (602)
Q Consensus 6 l~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~--y~sv~~i~~~~p~vDlavi~vp 81 (602)
-+..+++.||| |..|+ .++.+..+|.+++ ..+ +.... .+.+ .+ .|..+ +.++.++.. +.|++++++|
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~-~~d-~~~~~-~~~~--~~-~g~~~~~~~~l~~~l~---~aDvVi~~~p 224 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGANVK-VGA-RSSAH-LARI--TE-MGLVPFHTDELKEHVK---DIDICINTIP 224 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTCEEE-EEE-SSHHH-HHHH--HH-TTCEEEEGGGHHHHST---TCSEEEECCS
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCCEEE-EEE-CCHHH-HHHH--HH-CCCeEEchhhHHHHhh---CCCEEEECCC
Confidence 35678888886 33333 7778888998753 444 42210 0000 00 13332 457777654 4799999999
Q ss_pred ChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE-cCCcccccccC
Q 007482 82 FRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI-GPATVGGIQAG 139 (602)
Q Consensus 82 ~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii-GPNc~G~~~~~ 139 (602)
....-...++.+. +|. .+|-++.|-.+.. + +.+++.|++++ =||..|.+.+.
T Consensus 225 ~~~i~~~~~~~mk-~g~-~lin~a~g~~~~~---~-~~a~~~G~~~i~~pg~~g~v~~a 277 (300)
T 2rir_A 225 SMILNQTVLSSMT-PKT-LILDLASRPGGTD---F-KYAEKQGIKALLAPGLPGIVAPK 277 (300)
T ss_dssp SCCBCHHHHTTSC-TTC-EEEECSSTTCSBC---H-HHHHHHTCEEEECCCHHHHHCHH
T ss_pred hhhhCHHHHHhCC-CCC-EEEEEeCCCCCcC---H-HHHHHCCCEEEECCCCCCcHHHH
Confidence 8543233444343 332 2232333322221 2 56677898865 57777766554
No 252
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=61.87 E-value=5.1 Score=41.55 Aligned_cols=51 Identities=22% Similarity=0.263 Sum_probs=33.5
Q ss_pred cccccCCHHHHhhcCCCccEEEEecCChhhHHHHHHHhhCC---CCc---EEEEecCCCCH
Q 007482 56 AIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQP---TIR---VVAIIAEGVPE 110 (602)
Q Consensus 56 G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~~e~~~~~---gv~---~~viis~Gf~E 110 (602)
++.+..+.+++.. +.|++|++||.. .+.++++.+... .++ .+|.++.|+..
T Consensus 90 ~i~~~~~~~ea~~---~aDvVilav~~~-~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~ 146 (375)
T 1yj8_A 90 NIVAHSDLASVIN---DADLLIFIVPCQ-YLESVLASIKESESIKIASHAKAISLTKGFIV 146 (375)
T ss_dssp TEEEESSTHHHHT---TCSEEEECCCHH-HHHHHHHHHTC---CCCCTTCEEEECCCSCEE
T ss_pred CeEEECCHHHHHc---CCCEEEEcCCHH-HHHHHHHHHhhhhhccCCCCCEEEEeCCcccc
Confidence 4556677777654 479999999975 588888887630 222 34444558753
No 253
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=61.31 E-value=44 Score=27.50 Aligned_cols=80 Identities=10% Similarity=0.045 Sum_probs=56.2
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCC-CcHHHHHHHHHh
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGG-RDEYSLVEALKQ 240 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~-~~~~~f~~~~r~ 240 (602)
-+|-+|...-.....+...+.+.|. . ++... +..+.++.+.+.+...+|++-++..- .++.++++.+|+
T Consensus 6 ~~ilivdd~~~~~~~l~~~L~~~g~--~-v~~~~-------~~~~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~ 75 (132)
T 2rdm_A 6 VTILLADDEAILLLDFESTLTDAGF--L-VTAVS-------SGAKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVARE 75 (132)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTC--E-EEEES-------SHHHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHH
T ss_pred ceEEEEcCcHHHHHHHHHHHHHcCC--E-EEEEC-------CHHHHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHh
Confidence 4688888888887777777775544 2 22222 34578888887655677877776433 578899999988
Q ss_pred cCCCCCEEEEE
Q 007482 241 GKVNKPVVAWV 251 (602)
Q Consensus 241 ~~~~KPVv~~k 251 (602)
.....|||++-
T Consensus 76 ~~~~~~ii~~s 86 (132)
T 2rdm_A 76 IDPNMPIVYIS 86 (132)
T ss_dssp HCTTCCEEEEE
T ss_pred cCCCCCEEEEe
Confidence 66678999884
No 254
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=60.76 E-value=25 Score=31.07 Aligned_cols=98 Identities=11% Similarity=-0.114 Sum_probs=49.2
Q ss_pred CCCcEEEEee-CCcH-HHHHHHhcCCeEEEEEe-CCCCCCccccccCce-eecccccCCHHHHhhc-CCCccEEEEecCC
Q 007482 8 SKTTQALFYN-YKQL-PIQRMLDFDFLCVAGII-NPGAEGFQKLFFGQE-EIAIPVHSTVEAACAA-HPMADVFINFSSF 82 (602)
Q Consensus 8 ~p~s~avv~g-~~~~-~~~~~~~~g~~~V~gv~-~p~~~~~~~~~~g~~-v~G~~~y~sv~~i~~~-~p~vDlavi~vp~ 82 (602)
..++++|+|+ ..|+ ..+.|...|++++ .+. .|.+-.....-.|.+ +.|- ..+...+... ..++|++|++++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~-vid~~~~~~~~~~~~~g~~~~~~d--~~~~~~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVV-VVDKNEYAFHRLNSEFSGFTVVGD--AAEFETLKECGMEKADMVFAFTND 94 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEESCGGGGGGSCTTCCSEEEESC--TTSHHHHHTTTGGGCSEEEECSSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEE-EEECCHHHHHHHHhcCCCcEEEec--CCCHHHHHHcCcccCCEEEEEeCC
Confidence 3456777752 2233 7777878898763 343 121111111011211 1121 1122221110 1137999999998
Q ss_pred hhhHHHHHHHhhC-CCCcEEEEecCCC
Q 007482 83 RSAAASSMAALKQ-PTIRVVAIIAEGV 108 (602)
Q Consensus 83 ~~~~~~~~e~~~~-~gv~~~viis~Gf 108 (602)
......+.+.+.. .+...++..+.+-
T Consensus 95 ~~~~~~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 95 DSTNFFISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEEECSSG
T ss_pred cHHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 7655666666664 5677777766654
No 255
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=60.48 E-value=52 Score=34.19 Aligned_cols=60 Identities=10% Similarity=0.080 Sum_probs=37.4
Q ss_pred CccEEEEecCChhhHHHHHHHhhCCCCcEEEEe-cCCC----------CHHHHHHHHHHHHhCCC-eeEcCCcc
Q 007482 72 MADVFINFSSFRSAAASSMAALKQPTIRVVAII-AEGV----------PEADTKQLIAYARSNNK-VVIGPATV 133 (602)
Q Consensus 72 ~vDlavi~vp~~~~~~~~~e~~~~~gv~~~vii-s~Gf----------~E~~~~~l~~~a~~~g~-riiGPNc~ 133 (602)
++|+++.++|... .....+.+.++|+|.+||= |+-| +|.-.+++. -++..|+ .|..|||-
T Consensus 65 ~~DvVf~a~g~~~-s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~-~~~~~g~~~Ianp~Ct 136 (367)
T 1t4b_A 65 ALDIIVTCQGGDY-TNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVIT-DGLNNGIRTFVGGNCT 136 (367)
T ss_dssp TCSEEEECSCHHH-HHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHH-HHHHTTCCEEEECCHH
T ss_pred CCCEEEECCCchh-HHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHh-hhhhcCCCEEEeCCHH
Confidence 4899999998754 5556666667899755554 3333 232333443 2334575 68899994
No 256
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=59.96 E-value=38 Score=27.88 Aligned_cols=78 Identities=10% Similarity=0.050 Sum_probs=55.8
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhc-
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG- 241 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~- 241 (602)
+|-+|...-.....+...+.+.| + .+.... +..+.++++.+.+ ..+|++-++....++..+++.+|+.
T Consensus 5 ~ilivdd~~~~~~~l~~~L~~~g--~-~v~~~~-------~~~~a~~~l~~~~-~dlii~D~~l~~~~g~~~~~~l~~~~ 73 (127)
T 3i42_A 5 QALIVEDYQAAAETFKELLEMLG--F-QADYVM-------SGTDALHAMSTRG-YDAVFIDLNLPDTSGLALVKQLRALP 73 (127)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTT--E-EEEEES-------SHHHHHHHHHHSC-CSEEEEESBCSSSBHHHHHHHHHHSC
T ss_pred eEEEEcCCHHHHHHHHHHHHHcC--C-CEEEEC-------CHHHHHHHHHhcC-CCEEEEeCCCCCCCHHHHHHHHHhhh
Confidence 57788888888878877777664 3 233322 3557888887654 6788887775667899999999986
Q ss_pred -CCCCCEEEEE
Q 007482 242 -KVNKPVVAWV 251 (602)
Q Consensus 242 -~~~KPVv~~k 251 (602)
....|||++-
T Consensus 74 ~~~~~~ii~~s 84 (127)
T 3i42_A 74 MEKTSKFVAVS 84 (127)
T ss_dssp CSSCCEEEEEE
T ss_pred ccCCCCEEEEE
Confidence 4567877774
No 257
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=59.04 E-value=23 Score=36.74 Aligned_cols=46 Identities=13% Similarity=0.075 Sum_probs=33.9
Q ss_pred HHHHHhhCCCCcEEEEecC-CCCHHHHHHHHHHHHhCCCeeEcCCccccc
Q 007482 88 SSMAALKQPTIRVVAIIAE-GVPEADTKQLIAYARSNNKVVIGPATVGGI 136 (602)
Q Consensus 88 ~~~e~~~~~gv~~~viis~-Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~ 136 (602)
..++.+.++||+.+|..+. |... +.+.++++|++.|+.|+- +.|+.
T Consensus 90 ~~l~~~~~aGv~tiV~~t~~g~gr-~~~~l~~la~~~gv~i~~--~tG~y 136 (364)
T 3k2g_A 90 AEVKQFAAVGGRSIVDPTCRGIGR-DPVKLRRISAETGVQVVM--GAGYY 136 (364)
T ss_dssp HHHHHHHHTTCCEEEECCCBTTTC-CHHHHHHHHHHHCCEEEE--CCSBC
T ss_pred HHHHHHHhcCCCeEEEeCCCcccC-CHHHHHHHHHHhCCcEEE--EeCcc
Confidence 5677778899999999874 4433 678899999999987752 34543
No 258
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=58.43 E-value=0.62 Score=48.29 Aligned_cols=92 Identities=14% Similarity=0.003 Sum_probs=50.3
Q ss_pred cEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccc----------cCcee-ecccccCCHHHHhhcCCCccEEE
Q 007482 11 TQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLF----------FGQEE-IAIPVHSTVEAACAAHPMADVFI 77 (602)
Q Consensus 11 s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~----------~g~~v-~G~~~y~sv~~i~~~~p~vDlav 77 (602)
+|+||| |..|. ...+|.+.|+++ ..++ .... +.+.+ .|.++ .++.+..+++++.+ +.|++|
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V-~~~~-r~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~aDvVi 90 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREV-CVWH-MNEE-EVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN---GAEIIL 90 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEE-EEEC-SCHH-HHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT---TCSSEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEE-EEEE-CCHH-HHHHHHHcCcccccccccccccceeeeCCHHHHHc---CCCEEE
Confidence 688886 33344 667777778774 2333 2111 00000 01111 13455677877654 479999
Q ss_pred EecCChhhHHHHHHH----hhC---C-CCcEEEEecCCCCH
Q 007482 78 NFSSFRSAAASSMAA----LKQ---P-TIRVVAIIAEGVPE 110 (602)
Q Consensus 78 i~vp~~~~~~~~~e~----~~~---~-gv~~~viis~Gf~E 110 (602)
++||.. .+.++++. +.. . + ..+|.++.|+..
T Consensus 91 lav~~~-~~~~v~~~~~~gl~~~l~~~~-~ivv~~~~gi~~ 129 (366)
T 1evy_A 91 FVIPTQ-FLRGFFEKSGGNLIAYAKEKQ-VPVLVCTKGIER 129 (366)
T ss_dssp ECCCHH-HHHHHHHHHCHHHHHHHHHHT-CCEEECCCSCCT
T ss_pred ECCChH-HHHHHHHHhHHHHHHhcCccC-CEEEEECCcCCC
Confidence 999975 46777766 431 1 2 234555658764
No 259
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=58.33 E-value=12 Score=36.59 Aligned_cols=50 Identities=18% Similarity=0.259 Sum_probs=40.3
Q ss_pred HHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCccccc
Q 007482 86 AASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGI 136 (602)
Q Consensus 86 ~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~ 136 (602)
.+++.+++.+.|+|.+-+++. +.....+.+.+..+++|+.++.|+|+|+.
T Consensus 105 ~~A~~~al~~~g~~rvglltp-y~~~~~~~~~~~l~~~Giev~~~~~~~~~ 154 (240)
T 3ixl_A 105 STAVLNGLRALGVRRVALATA-YIDDVNERLAAFLAEESLVPTGCRSLGIT 154 (240)
T ss_dssp HHHHHHHHHHTTCSEEEEEES-SCHHHHHHHHHHHHHTTCEEEEEEECCCC
T ss_pred HHHHHHHHHHhCCCEEEEEeC-ChHHHHHHHHHHHHHCCCEEeccccCCCC
Confidence 456677777788998888886 66666777888888899999999988863
No 260
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=57.86 E-value=41 Score=27.91 Aligned_cols=113 Identities=13% Similarity=0.185 Sum_probs=72.8
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|-+|-.+-.....+...+.+.| +..+.... +..+.++.+...+...+|++-++....++-++++.+|+..
T Consensus 7 ~iLivdd~~~~~~~l~~~L~~~g--~~~v~~~~-------~~~~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~ 77 (129)
T 3h1g_A 7 KLLVVDDSSTMRRIIKNTLSRLG--YEDVLEAE-------HGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDS 77 (129)
T ss_dssp CEEEECSCHHHHHHHHHHHHHTT--CCCEEEES-------SHHHHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTST
T ss_pred EEEEEeCCHHHHHHHHHHHHHcC--CcEEEEeC-------CHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcC
Confidence 68888888888888777777654 43333332 3457788887665667777766655567899999999753
Q ss_pred --CCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHH
Q 007482 243 --VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETF 308 (602)
Q Consensus 243 --~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~ 308 (602)
...|||++- +... .....-..++|+ ...-+.++|...++.++
T Consensus 78 ~~~~~pii~~s-~~~~-----------------------~~~~~~~~~~g~~~~l~KP~~~~~L~~~l~~~l 125 (129)
T 3h1g_A 78 RFKEIPIIMIT-AEGG-----------------------KAEVITALKAGVNNYIVKPFTPQVLKEKLEVVL 125 (129)
T ss_dssp TCTTCCEEEEE-SCCS-----------------------HHHHHHHHHHTCCEEEESCCCHHHHHHHHHHHH
T ss_pred CCCCCeEEEEe-CCCC-----------------------hHHHHHHHHcCccEEEeCCCCHHHHHHHHHHHh
Confidence 467888873 2111 111122235564 34668888888877665
No 261
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=57.62 E-value=14 Score=39.95 Aligned_cols=90 Identities=11% Similarity=0.049 Sum_probs=50.0
Q ss_pred CCCcEEEEeeCCc--H-HHHHHHh-cCCe--EEEEEeCCCCC-CccccccCceeecccccCC-----HHHHhhcCCCccE
Q 007482 8 SKTTQALFYNYKQ--L-PIQRMLD-FDFL--CVAGIINPGAE-GFQKLFFGQEEIAIPVHST-----VEAACAAHPMADV 75 (602)
Q Consensus 8 ~p~s~avv~g~~~--~-~~~~~~~-~g~~--~V~gv~~p~~~-~~~~~~~g~~v~G~~~y~s-----v~~i~~~~p~vDl 75 (602)
+++.+++|.|+++ + +++.+.+ .++. -|...+ |... .+..+..|-++.+..+-++ +++++.+ .|+
T Consensus 11 ~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD-~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~---~Dv 86 (480)
T 2ph5_A 11 LFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIA-AEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEE---NDF 86 (480)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEE-SSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCT---TCE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEec-cchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcC---CCE
Confidence 3433444445543 4 5555555 5553 133445 5322 2222333445555555444 3334432 399
Q ss_pred EEEecCChhhHHHHHHHhhCCCCcEEE
Q 007482 76 FINFSSFRSAAASSMAALKQPTIRVVA 102 (602)
Q Consensus 76 avi~vp~~~~~~~~~e~~~~~gv~~~v 102 (602)
+|.+.+... ...++++|.+.|+..+=
T Consensus 87 VIN~s~~~~-~l~Im~acleaGv~YlD 112 (480)
T 2ph5_A 87 LIDVSIGIS-SLALIILCNQKGALYIN 112 (480)
T ss_dssp EEECCSSSC-HHHHHHHHHHHTCEEEE
T ss_pred EEECCcccc-CHHHHHHHHHcCCCEEE
Confidence 998887765 67899999999997543
No 262
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=57.40 E-value=5.9 Score=39.40 Aligned_cols=98 Identities=9% Similarity=-0.064 Sum_probs=52.7
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCC--ccccc---------------cCc----eeecccccCCHHH
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEG--FQKLF---------------FGQ----EEIAIPVHSTVEA 65 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~--~~~~~---------------~g~----~v~G~~~y~sv~~ 65 (602)
-++++||| |..|. +.+.+...|++++ ..+ +.... +.... ... ....+....++++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~-l~d-~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~ 81 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVT-AYD-INTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ 81 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEE-EEe-CCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence 46789886 33344 7788888999853 333 32110 00000 000 0012455677777
Q ss_pred HhhcCCCccEEEEecCChh-hHHHHHHHhhC-CCCcEEEE-ecCCCCHH
Q 007482 66 ACAAHPMADVFINFSSFRS-AAASSMAALKQ-PTIRVVAI-IAEGVPEA 111 (602)
Q Consensus 66 i~~~~p~vDlavi~vp~~~-~~~~~~e~~~~-~gv~~~vi-is~Gf~E~ 111 (602)
+.. +.|++|.+||... ....+++++.+ ..-..+++ .+++++..
T Consensus 82 ~~~---~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~ 127 (283)
T 4e12_A 82 AVK---DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPS 127 (283)
T ss_dssp HTT---TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH
T ss_pred Hhc---cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence 554 4899999999852 24445555432 12233444 57888754
No 263
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=56.44 E-value=15 Score=37.69 Aligned_cols=45 Identities=24% Similarity=0.317 Sum_probs=28.6
Q ss_pred ccccCCHHHHhhcCCCccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCC
Q 007482 57 IPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEG 107 (602)
Q Consensus 57 ~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~G 107 (602)
+++..+..++.. ++|+++.++|... .....+.+.++|.+ +| .+++
T Consensus 66 l~v~~~~~~~~~---~vDvV~~atp~~~-~~~~a~~~l~aG~~-VI-d~sp 110 (337)
T 1cf2_P 66 IEVAGTVDDMLD---EADIVIDCTPEGI-GAKNLKMYKEKGIK-AI-FQGG 110 (337)
T ss_dssp CCCCEEHHHHHH---TCSEEEECCSTTH-HHHHHHHHHHHTCC-EE-ECTT
T ss_pred eEEcCCHHHHhc---CCCEEEECCCchh-hHHHHHHHHHcCCE-EE-EecC
Confidence 344445666544 4899999999864 44555666668876 44 4444
No 264
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=56.06 E-value=51 Score=27.58 Aligned_cols=122 Identities=9% Similarity=-0.001 Sum_probs=76.9
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHH
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 239 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r 239 (602)
.+-+|-+|...-.....+...+.+.| +. +... .+..+.++++.+.+ ..+|++-++....++.++++.+|
T Consensus 6 ~~~~iLivdd~~~~~~~l~~~L~~~g--~~-v~~~-------~~~~~a~~~l~~~~-~dlii~d~~l~~~~g~~~~~~l~ 74 (142)
T 3cg4_A 6 HKGDVMIVDDDAHVRIAVKTILSDAG--FH-IISA-------DSGGQCIDLLKKGF-SGVVLLDIMMPGMDGWDTIRAIL 74 (142)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHTT--CE-EEEE-------SSHHHHHHHHHTCC-CEEEEEESCCSSSCHHHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHHCC--eE-EEEe-------CCHHHHHHHHHhcC-CCEEEEeCCCCCCCHHHHHHHHH
Confidence 35578999999888888888887764 32 2222 23558888887654 67777777644567889999999
Q ss_pred h--cCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcC-CcccCCHHHHHHHHHHHHHhHhh
Q 007482 240 Q--GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG-AVVPTSYEAFESAIKETFEKLVE 313 (602)
Q Consensus 240 ~--~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaG-vi~v~~~~el~~~~~~~~~~~~~ 313 (602)
+ .....|||++-....... ....-..|+ + + +...-+.++|...++.+..+...
T Consensus 75 ~~~~~~~~pii~~s~~~~~~~---~~~~~~~g~----~--------------~~l~kp~~~~~l~~~i~~~~~~~~~ 130 (142)
T 3cg4_A 75 DNSLEQGIAIVMLTAKNAPDA---KMIGLQEYV----V--------------DYITKPFDNEDLIEKTTFFMGFVRN 130 (142)
T ss_dssp HTTCCTTEEEEEEECTTCCCC---SSTTGGGGE----E--------------EEEESSCCHHHHHHHHHHHHHHHHH
T ss_pred hhcccCCCCEEEEECCCCHHH---HHHHHhcCc----c--------------EEEeCCCCHHHHHHHHHHHHHHHhh
Confidence 8 446678888754332221 111111111 0 1 23456888999888877765433
No 265
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=55.82 E-value=7.2 Score=39.07 Aligned_cols=117 Identities=14% Similarity=0.068 Sum_probs=65.2
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccc--cCCHHHHhhcCCCccEEEEecCC
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPV--HSTVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~--y~sv~~i~~~~p~vDlavi~vp~ 82 (602)
+..+++.||| |..|+ ..+.+..+|.+++ ..+ +.... .+.. .-.|... +.++.++.. +.|++++++|.
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~-~~d-r~~~~-~~~~---~~~g~~~~~~~~l~~~l~---~aDvVi~~~p~ 223 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGAKVK-VGA-RESDL-LARI---AEMGMEPFHISKAAQELR---DVDVCINTIPA 223 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEE-SSHHH-HHHH---HHTTSEEEEGGGHHHHTT---TCSEEEECCSS
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCCEEE-EEE-CCHHH-HHHH---HHCCCeecChhhHHHHhc---CCCEEEECCCh
Confidence 5667888886 33344 7777888998753 444 42210 0000 0113332 356777654 47999999998
Q ss_pred hhhHHHHHHHhhCCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCeeE-cCCcccccccC
Q 007482 83 RSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVVI-GPATVGGIQAG 139 (602)
Q Consensus 83 ~~~~~~~~e~~~~~gv~~~vii-s~Gf~E~~~~~l~~~a~~~g~rii-GPNc~G~~~~~ 139 (602)
...-...++.+. +| .++|- +.|-.+.. + +.+++.|++++ =||..|.+.|.
T Consensus 224 ~~i~~~~l~~mk-~~--~~lin~ar~~~~~~---~-~~a~~~Gv~~~~~~~l~~~v~p~ 275 (293)
T 3d4o_A 224 LVVTANVLAEMP-SH--TFVIDLASKPGGTD---F-RYAEKRGIKALLVPGLPGIVAPK 275 (293)
T ss_dssp CCBCHHHHHHSC-TT--CEEEECSSTTCSBC---H-HHHHHHTCEEEECCCHHHHHCHH
T ss_pred HHhCHHHHHhcC-CC--CEEEEecCCCCCCC---H-HHHHHCCCEEEECCCCCcccCHH
Confidence 543345566554 33 23333 33322222 2 56677898876 46766666554
No 266
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=55.80 E-value=49 Score=26.17 Aligned_cols=78 Identities=9% Similarity=0.099 Sum_probs=53.6
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|-+|..+-.....+...+.+.|.- +.... +..+.++++.+. ...+|++-.+....++.++++.+++..
T Consensus 3 ~iliv~~~~~~~~~l~~~l~~~g~~---v~~~~-------~~~~~~~~l~~~-~~dlii~d~~~~~~~~~~~~~~l~~~~ 71 (119)
T 2j48_A 3 HILLLEEEDEAATVVCEMLTAAGFK---VIWLV-------DGSTALDQLDLL-QPIVILMAWPPPDQSCLLLLQHLREHQ 71 (119)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCE---EEEES-------CHHHHHHHHHHH-CCSEEEEECSTTCCTHHHHHHHHHHTC
T ss_pred EEEEEeCCHHHHHHHHHHHHhCCcE---EEEec-------CHHHHHHHHHhc-CCCEEEEecCCCCCCHHHHHHHHHhcc
Confidence 5778888888877777777765542 23322 345777777664 356777777644467889999998864
Q ss_pred --CCCCEEEEE
Q 007482 243 --VNKPVVAWV 251 (602)
Q Consensus 243 --~~KPVv~~k 251 (602)
...|||++-
T Consensus 72 ~~~~~~ii~~~ 82 (119)
T 2j48_A 72 ADPHPPLVLFL 82 (119)
T ss_dssp CCSSCCCEEEE
T ss_pred ccCCCCEEEEe
Confidence 577988873
No 267
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=54.69 E-value=49 Score=28.25 Aligned_cols=116 Identities=10% Similarity=0.068 Sum_probs=75.3
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhc
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 241 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~ 241 (602)
=+|-+|..+-.....+...+.+.+ ++..+.... +..+.++++.+.+ ..+|++-+.....++..+++.+|+.
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~~-~~~~v~~~~-------~~~~al~~l~~~~-~dlii~D~~l~~~~g~~~~~~l~~~ 91 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQP-DVESVLQAK-------NGQEAIQLLEKES-VDIAILDVEMPVKTGLEVLEWIRSE 91 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTST-TEEEEEEES-------SHHHHHHHHTTSC-CSEEEECSSCSSSCHHHHHHHHHHT
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCC-CcEEEEEEC-------CHHHHHHHhhccC-CCEEEEeCCCCCCcHHHHHHHHHHh
Confidence 368999999988888877777554 233333333 3457788876543 5777777665556789999999986
Q ss_pred CCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHh
Q 007482 242 KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFEK 310 (602)
Q Consensus 242 ~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~~ 310 (602)
....|||++-.. .. .....-+.++|+. ...+.++|...++.+..+
T Consensus 92 ~~~~~ii~ls~~-~~-----------------------~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~ 140 (150)
T 4e7p_A 92 KLETKVVVVTTF-KR-----------------------AGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEG 140 (150)
T ss_dssp TCSCEEEEEESC-CC-----------------------HHHHHHHHHTTCSEEEETTSCHHHHHHHHHHHHTT
T ss_pred CCCCeEEEEeCC-CC-----------------------HHHHHHHHHCCCcEEEecCCCHHHHHHHHHHHHcC
Confidence 677788887422 11 1122223456653 345788888888776643
No 268
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=54.57 E-value=60 Score=26.94 Aligned_cols=116 Identities=8% Similarity=0.090 Sum_probs=77.0
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHh
Q 007482 161 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 240 (602)
Q Consensus 161 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~ 240 (602)
.-+|-+|...-.....+...+.+.|.-+ +.. .+..+.+..+.+.+...+|++-++....++..|++.+|+
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~v---~~~-------~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~ 76 (136)
T 3hdv_A 7 RPLVLVVDDNAVNREALILYLKSRGIDA---VGA-------DGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRA 76 (136)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCCE---EEE-------SSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHHHcCceE---EEe-------CCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHh
Confidence 4579999999888888888887765322 222 235577888887766777777776555678999999998
Q ss_pred c-CCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHh
Q 007482 241 G-KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFEK 310 (602)
Q Consensus 241 ~-~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~~ 310 (602)
. ....|||++-.- .. .....-+.++|+. ..-+.++|...++.+...
T Consensus 77 ~~~~~~~ii~~s~~-~~-----------------------~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~ 127 (136)
T 3hdv_A 77 SERAALSIIVVSGD-TD-----------------------VEEAVDVMHLGVVDFLLKPVDLGKLLELVNKELKI 127 (136)
T ss_dssp STTTTCEEEEEESS-CC-----------------------HHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHC-
T ss_pred cCCCCCCEEEEeCC-CC-----------------------hHHHHHHHhCCcceEEeCCCCHHHHHHHHHHHhcC
Confidence 6 466788877322 11 1112223366653 356888988888776643
No 269
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=53.67 E-value=29 Score=35.90 Aligned_cols=35 Identities=11% Similarity=-0.010 Sum_probs=26.7
Q ss_pred CccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCCCC
Q 007482 72 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 109 (602)
Q Consensus 72 ~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~ 109 (602)
++|+++.++|... .....+.+ ++|++ +|.+|+-|.
T Consensus 80 ~~DvVf~alg~~~-s~~~~~~~-~~G~~-vIDlSa~~R 114 (352)
T 2nqt_A 80 GHDAVFLALPHGH-SAVLAQQL-SPETL-IIDCGADFR 114 (352)
T ss_dssp TCSEEEECCTTSC-CHHHHHHS-CTTSE-EEECSSTTT
T ss_pred CCCEEEECCCCcc-hHHHHHHH-hCCCE-EEEECCCcc
Confidence 4899999998864 45667777 78975 777787775
No 270
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=53.22 E-value=10 Score=36.48 Aligned_cols=64 Identities=19% Similarity=0.273 Sum_probs=42.9
Q ss_pred EeeccCCCCCCCC---HHHHHHHhhcCCCccEEEEEEe-cCC--CcHHHHHHHHHhcCCCCCEEEEEeCcCcc
Q 007482 191 GIAIGGDVFPGST---LSDHILRFNNIPQVKMMVVLGE-LGG--RDEYSLVEALKQGKVNKPVVAWVSGTCAR 257 (602)
Q Consensus 191 ~vs~Gn~~~~dv~---~~d~l~~l~~Dp~t~~I~ly~E-~g~--~~~~~f~~~~r~~~~~KPVv~~k~Gr~~~ 257 (602)
+|-+++.. .+-+ +.+.|.++.+|+.+|.|.+|+. +|+ ..+....+.+++ .+|||+++..|...+
T Consensus 47 ii~l~g~I-~~~~a~~i~~~L~~l~~~~~~k~I~l~InSPGG~v~ag~~I~~~i~~--~~~pV~t~v~G~AaS 116 (218)
T 1y7o_A 47 IIMLTGPV-EDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNF--IKADVQTIVMGMAAS 116 (218)
T ss_dssp EEEEESCB-CHHHHHHHHHHHHHHHHHCTTSCEEEEEEECCBCHHHHHHHHHHHHH--SSSCEEEEEEEEEET
T ss_pred EEEEeCEE-CHHHHHHHHHHHHHHHhcCCCCCEEEEEECcCCCHHHHHHHHHHHHh--cCCCEEEEEccEeHH
Confidence 44555553 2222 3455667788999999999998 333 235566777776 469999999876554
No 271
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=53.06 E-value=42 Score=30.72 Aligned_cols=35 Identities=6% Similarity=0.126 Sum_probs=20.4
Q ss_pred CccEEEEecCCh--------hhHHHHHHHhhCCCCcEEEEecC
Q 007482 72 MADVFINFSSFR--------SAAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 72 ~vDlavi~vp~~--------~~~~~~~e~~~~~gv~~~viis~ 106 (602)
++|.+|.+.... .....++++|.+.|++.+|.+||
T Consensus 61 ~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 DQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp TCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred CCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 367777665432 11245666666666666666665
No 272
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=52.89 E-value=6.9 Score=43.59 Aligned_cols=47 Identities=19% Similarity=0.085 Sum_probs=35.5
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCC-----cHHHHHHHHHhcC-CCCCEEEEE
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGGR-----DEYSLVEALKQGK-VNKPVVAWV 251 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~~-----~~~~f~~~~r~~~-~~KPVv~~k 251 (602)
+.+-|++..+||++|.|+||+. +.. ...+..+++++.+ .+||||++-
T Consensus 75 i~~~L~~a~~d~~ik~I~L~in-spGgG~v~~~~~I~~~i~~~k~~gkpvva~~ 127 (593)
T 3bf0_A 75 IVNTIRQAKDDRNITGIVMDLK-NFAGGDQPSMQYIGKALKEFRDSGKPVYAVG 127 (593)
T ss_dssp HHHHHHHHHHCTTCCCEEEECT-EEEECCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhCCCceEEEEEeC-CCCCCcHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 4455667788999999999997 333 3466777777765 579999994
No 273
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=52.89 E-value=29 Score=33.67 Aligned_cols=91 Identities=9% Similarity=-0.017 Sum_probs=48.5
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecc-----cccCCHHHHhhcCCCccEEEEecCC
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAI-----PVHSTVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~-----~~y~sv~~i~~~~p~vDlavi~vp~ 82 (602)
++++||| |..|. ...+|.+.|+++. .++ .... +.+.+.-....|. ....+.+ ..+ +.|+++++||+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~-r~~~-~~~~l~~~~~~~~~~~~~~~~~~~~-~~~---~~d~vi~~v~~ 73 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQ-GWL-RVPQ-PYCSVNLVETDGSIFNESLTANDPD-FLA---TSDLLLVTLKA 73 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SSCC-SEEEEEEECTTSCEEEEEEEESCHH-HHH---TCSEEEECSCG
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEE-EEE-cCcc-ceeeEEEEcCCCceeeeeeeecCcc-ccC---CCCEEEEEecH
Confidence 3688886 33344 7778888898752 333 2221 1111100000111 1123433 333 37999999999
Q ss_pred hhhHHHHHHHhhCCCC---cEEEEecCCCC
Q 007482 83 RSAAASSMAALKQPTI---RVVAIIAEGVP 109 (602)
Q Consensus 83 ~~~~~~~~e~~~~~gv---~~~viis~Gf~ 109 (602)
.. +.++++.+.. .+ ..++.++.|+.
T Consensus 74 ~~-~~~v~~~l~~-~l~~~~~vv~~~~g~~ 101 (291)
T 1ks9_A 74 WQ-VSDAVKSLAS-TLPVTTPILLIHNGMG 101 (291)
T ss_dssp GG-HHHHHHHHHT-TSCTTSCEEEECSSSC
T ss_pred Hh-HHHHHHHHHh-hCCCCCEEEEecCCCC
Confidence 75 7888887763 22 23555577774
No 274
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=52.82 E-value=23 Score=31.26 Aligned_cols=61 Identities=11% Similarity=0.086 Sum_probs=38.9
Q ss_pred CccEEEEecCChhh---HHHHHHHhhCCCCcEEEEecCCC---CHHHHHHHHHHHHhCCC-eeEcCCc
Q 007482 72 MADVFINFSSFRSA---AASSMAALKQPTIRVVAIIAEGV---PEADTKQLIAYARSNNK-VVIGPAT 132 (602)
Q Consensus 72 ~vDlavi~vp~~~~---~~~~~e~~~~~gv~~~viis~Gf---~E~~~~~l~~~a~~~g~-riiGPNc 132 (602)
++|++.++.-.... ...+++++.++|.+.+.|+-+|- ++.+..+..+.+++.|+ .+.+|.+
T Consensus 54 ~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~~~~~g~ 121 (137)
T 1ccw_A 54 KADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVYAPGT 121 (137)
T ss_dssp TCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEECCTTC
T ss_pred CCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECCCcCchHhhhhhHHHHHHCCCCEEECCCC
Confidence 47999988755332 23567778777774444455563 23344555677888898 5777765
No 275
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=52.58 E-value=45 Score=27.80 Aligned_cols=113 Identities=12% Similarity=0.102 Sum_probs=72.0
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecC-----CCcHHHHHH
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELG-----GRDEYSLVE 236 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g-----~~~~~~f~~ 236 (602)
-+|-+|.........+...+.+.| +. +... .+..+.++++.+.+ ..+|++-++.. ..++.++++
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g--~~-v~~~-------~~~~~a~~~l~~~~-~dlvi~d~~~~~~~~~~~~g~~~~~ 72 (140)
T 2qr3_A 4 GTIIIVDDNKGVLTAVQLLLKNHF--SK-VITL-------SSPVSLSTVLREEN-PEVVLLDMNFTSGINNGNEGLFWLH 72 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTTS--SE-EEEE-------CCHHHHHHHHHHSC-EEEEEEETTTTC-----CCHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCC--cE-EEEe-------CCHHHHHHHHHcCC-CCEEEEeCCcCCCCCCCccHHHHHH
Confidence 358888888888888777777654 42 2222 23567888887654 56777766533 457889999
Q ss_pred HHHhcCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHH
Q 007482 237 ALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFE 309 (602)
Q Consensus 237 ~~r~~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~ 309 (602)
.+|+.....|||++-.-... ... .-..++|+ ...-+.++|...++.+..
T Consensus 73 ~l~~~~~~~~ii~ls~~~~~-----------------------~~~-~~~~~~g~~~~l~kp~~~~~l~~~l~~~~~ 125 (140)
T 2qr3_A 73 EIKRQYRDLPVVLFTAYADI-----------------------DLA-VRGIKEGASDFVVKPWDNQKLLETLLNAAS 125 (140)
T ss_dssp HHHHHCTTCCEEEEEEGGGH-----------------------HHH-HHHHHTTCCEEEEESCCHHHHHHHHHHHHT
T ss_pred HHHhhCcCCCEEEEECCCCH-----------------------HHH-HHHHHcCchheeeCCCCHHHHHHHHHHHHH
Confidence 99886678899988422111 122 22335565 345678888888876664
No 276
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=52.09 E-value=9 Score=42.65 Aligned_cols=55 Identities=24% Similarity=0.228 Sum_probs=39.6
Q ss_pred CHHHHHHHhhcCCCccEEEEEEecCC-Cc---HHHHHHHHHhcC-CCCCEEEEEeCcCccC
Q 007482 203 TLSDHILRFNNIPQVKMMVVLGELGG-RD---EYSLVEALKQGK-VNKPVVAWVSGTCARL 258 (602)
Q Consensus 203 ~~~d~l~~l~~Dp~t~~I~ly~E~g~-~~---~~~f~~~~r~~~-~~KPVv~~k~Gr~~~g 258 (602)
.+.+.|+.+.+|+++|+|+|.++ +- .+ .+.+.+.+++.+ .+||||+..-|....|
T Consensus 326 ~l~~~L~~a~~d~~vkaVVL~i~-spGG~~~~~~~i~~~i~~l~~~~kPVia~v~g~Aasg 385 (593)
T 3bf0_A 326 TTAAQIRDARLDPKVKAIVLRVN-SPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASG 385 (593)
T ss_dssp HHHHHHHHHHHCTTEEEEEEEEE-EEEECHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETH
T ss_pred HHHHHHHHHHhCCCCCEEEEEec-CCCCCHHHHHHHHHHHHHHHhCCCCEEEEECCChHHH
Confidence 46778888999999999999998 32 22 233445555544 6799999987766543
No 277
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=52.03 E-value=32 Score=34.63 Aligned_cols=131 Identities=8% Similarity=0.037 Sum_probs=68.6
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCC------CC----CCCHHHHHHHhh-----cCCCccEEEEEEecC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDV------FP----GSTLSDHILRFN-----NIPQVKMMVVLGELG 227 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~------~~----dv~~~d~l~~l~-----~Dp~t~~I~ly~E~g 227 (602)
+||+|.-+|.++...+..+.+.+.-+..+++.-.+. ++ -.++.|+++++. +|++..+|.+... .
T Consensus 5 rvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP-~ 83 (318)
T 3oa2_A 5 NFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSP-N 83 (318)
T ss_dssp EEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSC-G
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCC-c
Confidence 456666655555555544444443333333321110 00 236777776654 4899999887666 3
Q ss_pred CCcHHHHHHHHHhcCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHH
Q 007482 228 GRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKET 307 (602)
Q Consensus 228 ~~~~~~f~~~~r~~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~ 307 (602)
-.+.+-..++++ .+|+|++=|+-.... +.++...++.++.|+.....+.--++-.-..
T Consensus 84 ~~H~~~~~~al~---aGkhVl~EKPla~~~-------------------~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~ 141 (318)
T 3oa2_A 84 YLHYPHIAAGLR---LGCDVICEKPLVPTP-------------------EMLDQLAVIERETDKRLYNILQLRHHQAIIA 141 (318)
T ss_dssp GGHHHHHHHHHH---TTCEEEECSSCCSCH-------------------HHHHHHHHHHHHHTCCEEECCGGGGCHHHHH
T ss_pred HHHHHHHHHHHH---CCCeEEEECCCcCCH-------------------HHHHHHHHHHHHhCCEEEEEEhhhcCHHHHH
Confidence 333333333444 589999888643332 1224555677888886644443333333233
Q ss_pred HHhHhhcCC
Q 007482 308 FEKLVEEGK 316 (602)
Q Consensus 308 ~~~~~~~g~ 316 (602)
+.+++.+|.
T Consensus 142 ~k~~i~~g~ 150 (318)
T 3oa2_A 142 LKDKVAREK 150 (318)
T ss_dssp HHHHHHHS-
T ss_pred HHHHHhcCC
Confidence 344444443
No 278
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=51.83 E-value=27 Score=34.63 Aligned_cols=24 Identities=13% Similarity=0.012 Sum_probs=15.9
Q ss_pred cEEEEeeCCcH----HHHHHHhcCCeEEE
Q 007482 11 TQALFYNYKQL----PIQRMLDFDFLCVA 35 (602)
Q Consensus 11 s~avv~g~~~~----~~~~~~~~g~~~V~ 35 (602)
++.|. |.+|. +++.|++.|++++.
T Consensus 15 ~ilVt-GatG~iG~~l~~~L~~~g~~V~~ 42 (342)
T 2x4g_A 15 KYAVL-GATGLLGHHAARAIRAAGHDLVL 42 (342)
T ss_dssp EEEEE-STTSHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEE-CCCcHHHHHHHHHHHHCCCEEEE
Confidence 45555 54443 77888889998653
No 279
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=51.81 E-value=27 Score=29.70 Aligned_cols=36 Identities=17% Similarity=0.062 Sum_probs=25.1
Q ss_pred CccEEEEecCCh-hhHHHHHHHhhCCCCcEEEEecCC
Q 007482 72 MADVFINFSSFR-SAAASSMAALKQPTIRVVAIIAEG 107 (602)
Q Consensus 72 ~vDlavi~vp~~-~~~~~~~e~~~~~gv~~~viis~G 107 (602)
++|++|++++.. .....+.+.+.+.|++.++..+.+
T Consensus 70 ~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 70 NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 479999999874 333456666777788866666654
No 280
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=51.61 E-value=81 Score=25.85 Aligned_cols=81 Identities=10% Similarity=0.074 Sum_probs=54.9
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHH
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 239 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r 239 (602)
.+-+|-+|.........+...+.+.|.-+ +.. .+..+.++.+.+.+ ..+|++-++....++-.+++.+|
T Consensus 6 ~~~~ilivdd~~~~~~~l~~~L~~~g~~v---~~~-------~~~~~a~~~l~~~~-~dlvi~d~~l~~~~g~~~~~~l~ 74 (130)
T 3eod_A 6 VGKQILIVEDEQVFRSLLDSWFSSLGATT---VLA-------ADGVDALELLGGFT-PDLMICDIAMPRMNGLKLLEHIR 74 (130)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHHTTCEE---EEE-------SCHHHHHHHHTTCC-CSEEEECCC-----CHHHHHHHH
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHhCCceE---EEe-------CCHHHHHHHHhcCC-CCEEEEecCCCCCCHHHHHHHHH
Confidence 45579999999988888888888765432 221 24567888886543 56777766644456789999999
Q ss_pred hcCCCCCEEEEE
Q 007482 240 QGKVNKPVVAWV 251 (602)
Q Consensus 240 ~~~~~KPVv~~k 251 (602)
+.....|||++-
T Consensus 75 ~~~~~~~ii~~t 86 (130)
T 3eod_A 75 NRGDQTPVLVIS 86 (130)
T ss_dssp HTTCCCCEEEEE
T ss_pred hcCCCCCEEEEE
Confidence 866778998883
No 281
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=51.47 E-value=82 Score=26.33 Aligned_cols=114 Identities=8% Similarity=0.114 Sum_probs=75.3
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhc-CCCccEEEEEEecCCCcHHHHHHHHHhc
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNN-IPQVKMMVVLGELGGRDEYSLVEALKQG 241 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~-Dp~t~~I~ly~E~g~~~~~~f~~~~r~~ 241 (602)
+|-+|...-.....+...+.+.|.- ++. -.+..+.++.+.+ .....+|++-++....++-.|++.+|+.
T Consensus 5 ~ilivdd~~~~~~~l~~~l~~~g~~---v~~-------~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~ 74 (143)
T 3jte_A 5 KILVIDDESTILQNIKFLLEIDGNE---VLT-------ASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKI 74 (143)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCE---EEE-------ESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCce---EEE-------eCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHh
Confidence 5778888888777777777766532 221 2345678888875 4556778777775556788999999986
Q ss_pred CCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHh
Q 007482 242 KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEK 310 (602)
Q Consensus 242 ~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~ 310 (602)
....|||++-.- .. .....-+.++|+ ...-+.++|...++.+..+
T Consensus 75 ~~~~~ii~ls~~-~~-----------------------~~~~~~~~~~g~~~~l~kp~~~~~l~~~l~~~~~~ 123 (143)
T 3jte_A 75 TPHMAVIILTGH-GD-----------------------LDNAILAMKEGAFEYLRKPVTAQDLSIAINNAINR 123 (143)
T ss_dssp CTTCEEEEEECT-TC-----------------------HHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECC-CC-----------------------HHHHHHHHHhCcceeEeCCCCHHHHHHHHHHHHHH
Confidence 677888887322 11 111222345664 3456889999988877653
No 282
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=51.15 E-value=13 Score=38.72 Aligned_cols=36 Identities=8% Similarity=-0.022 Sum_probs=25.9
Q ss_pred CccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCCCC
Q 007482 72 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 109 (602)
Q Consensus 72 ~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~ 109 (602)
++|+++.|+|... .....+.+.++|++ +|.+|+-|.
T Consensus 79 ~vDvvf~a~p~~~-s~~~a~~~~~~G~~-vIDlSa~~R 114 (359)
T 4dpk_A 79 DVDIIFSPLPQGA-AGPVEEQFAKEGFP-VISNSPDHR 114 (359)
T ss_dssp TCCEEEECCCTTT-HHHHHHHHHHTTCE-EEECSSTTT
T ss_pred CCCEEEECCChHH-HHHHHHHHHHCCCE-EEEcCCCcc
Confidence 5899999999864 44556666668986 666677554
No 283
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=51.15 E-value=13 Score=38.72 Aligned_cols=36 Identities=8% Similarity=-0.022 Sum_probs=25.9
Q ss_pred CccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCCCC
Q 007482 72 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 109 (602)
Q Consensus 72 ~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~ 109 (602)
++|+++.|+|... .....+.+.++|++ +|.+|+-|.
T Consensus 79 ~vDvvf~a~p~~~-s~~~a~~~~~~G~~-vIDlSa~~R 114 (359)
T 4dpl_A 79 DVDIIFSPLPQGA-AGPVEEQFAKEGFP-VISNSPDHR 114 (359)
T ss_dssp TCCEEEECCCTTT-HHHHHHHHHHTTCE-EEECSSTTT
T ss_pred CCCEEEECCChHH-HHHHHHHHHHCCCE-EEEcCCCcc
Confidence 5899999999864 44556666668986 666677564
No 284
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=51.01 E-value=12 Score=37.98 Aligned_cols=90 Identities=11% Similarity=0.009 Sum_probs=49.7
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHh--cCCeEEEEEeCCC--C-CCccccccCceeeccc-ccCCHHHHhhc--CCCccEEE
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLD--FDFLCVAGIINPG--A-EGFQKLFFGQEEIAIP-VHSTVEAACAA--HPMADVFI 77 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~--~g~~~V~gv~~p~--~-~~~~~~~~g~~v~G~~-~y~sv~~i~~~--~p~vDlav 77 (602)
++.+++||| |..|+ +++.+.+ -+.++++.++ .. + +.+. .+..|.+ .+.+++++.+. .+++|+++
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d-~~~~~~~~~~-----a~~~g~~~~~~~~e~ll~~~~~~~iDvV~ 76 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVG-IDAASDGLAR-----AQRMGVTTTYAGVEGLIKLPEFADIDFVF 76 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEEC-SCTTCHHHHH-----HHHTTCCEESSHHHHHHHSGGGGGEEEEE
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEe-CChhhhHHHH-----HHHcCCCcccCCHHHHHhccCCCCCcEEE
Confidence 356788886 22233 6666644 3456654444 32 2 1111 1123455 35677777543 12589999
Q ss_pred EecCChhhHHHHHHHhhCC--CCcEEEEec
Q 007482 78 NFSSFRSAAASSMAALKQP--TIRVVAIIA 105 (602)
Q Consensus 78 i~vp~~~~~~~~~e~~~~~--gv~~~viis 105 (602)
+++|.....+.+.+++. + |.+ +++.+
T Consensus 77 ~atp~~~h~~~a~~al~-a~~Gk~-Vi~ek 104 (312)
T 1nvm_B 77 DATSASAHVQNEALLRQ-AKPGIR-LIDLT 104 (312)
T ss_dssp ECSCHHHHHHHHHHHHH-HCTTCE-EEECS
T ss_pred ECCChHHHHHHHHHHHH-hCCCCE-EEEcC
Confidence 99997655555555555 5 654 55544
No 285
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=50.90 E-value=1.1e+02 Score=25.85 Aligned_cols=116 Identities=14% Similarity=0.092 Sum_probs=75.7
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHh
Q 007482 161 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 240 (602)
Q Consensus 161 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~ 240 (602)
+-+|-+|.........+...+.+.| +. ++.. -+..+.++++.+.+ ..+|++-+.....++..+++.+++
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g--~~-v~~~-------~~~~~a~~~l~~~~-~dlvi~d~~l~~~~g~~~~~~l~~ 75 (154)
T 2rjn_A 7 NYTVMLVDDEQPILNSLKRLIKRLG--CN-IITF-------TSPLDALEALKGTS-VQLVISDMRMPEMGGEVFLEQVAK 75 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTT--CE-EEEE-------SCHHHHHHHHTTSC-CSEEEEESSCSSSCHHHHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHcC--Ce-EEEe-------CCHHHHHHHHhcCC-CCEEEEecCCCCCCHHHHHHHHHH
Confidence 4468999999888888877777654 43 2222 23557888887654 678877776445678899999988
Q ss_pred cCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHh
Q 007482 241 GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEK 310 (602)
Q Consensus 241 ~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~ 310 (602)
.....|||++-.. ... .....+++..|+ ...-+.++|...++.+...
T Consensus 76 ~~~~~~ii~ls~~-~~~----------------------~~~~~~~~~g~~~~~l~kP~~~~~L~~~i~~~~~~ 126 (154)
T 2rjn_A 76 SYPDIERVVISGY-ADA----------------------QATIDAVNRGKISRFLLKPWEDEDVFKVVEKGLQL 126 (154)
T ss_dssp HCTTSEEEEEECG-GGH----------------------HHHHHHHHTTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred hCCCCcEEEEecC-CCH----------------------HHHHHHHhccchheeeeCCCCHHHHHHHHHHHHHH
Confidence 6667898887321 111 233344443323 2356888998888776643
No 286
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=50.86 E-value=2.2 Score=42.52 Aligned_cols=107 Identities=9% Similarity=0.019 Sum_probs=56.9
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
..++++|+| |..++ +.+.|.+.|+++ ..++ .... +.+.+. +..|..++.++.++.. +.|++|+++|....
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g~~V-~v~~-r~~~-~~~~l~--~~~g~~~~~~~~~~~~---~aDiVi~atp~~~~ 199 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEGAKV-FLWN-RTKE-KAIKLA--QKFPLEVVNSPEEVID---KVQVIVNTTSVGLK 199 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHTCEE-EEEC-SSHH-HHHHHT--TTSCEEECSCGGGTGG---GCSEEEECSSTTSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHcCCEE-EEEE-CCHH-HHHHHH--HHcCCeeehhHHhhhc---CCCEEEEeCCCCCC
Confidence 456777775 22233 777888888853 3443 3211 111110 1124566667777654 47999999998642
Q ss_pred H--HHHHH-HhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE
Q 007482 86 A--ASSMA-ALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 128 (602)
Q Consensus 86 ~--~~~~e-~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii 128 (602)
. ...++ ++-+.| .+++.-.. ...++.+.+++.|++++
T Consensus 200 ~~~~~~i~~~~l~~g---~~viDv~~---~~t~ll~~a~~~g~~~v 239 (275)
T 2hk9_A 200 DEDPEIFNYDLIKKD---HVVVDIIY---KETKLLKKAKEKGAKLL 239 (275)
T ss_dssp TTCCCSSCGGGCCTT---SEEEESSS---SCCHHHHHHHHTTCEEE
T ss_pred CCCCCCCCHHHcCCC---CEEEEcCC---ChHHHHHHHHHCcCEEE
Confidence 1 01221 122222 23333333 23456778888898876
No 287
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=50.84 E-value=27 Score=35.90 Aligned_cols=36 Identities=8% Similarity=-0.013 Sum_probs=26.5
Q ss_pred CccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCCCC
Q 007482 72 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 109 (602)
Q Consensus 72 ~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~ 109 (602)
++|+++.++|... .....+.+.++|++ +|-.|+-|.
T Consensus 75 ~~Dvvf~a~p~~~-s~~~~~~~~~~g~~-vIDlSa~fR 110 (337)
T 3dr3_A 75 GVDVVFLATAHEV-SHDLAPQFLEAGCV-VFDLSGAFR 110 (337)
T ss_dssp TCSEEEECSCHHH-HHHHHHHHHHTTCE-EEECSSTTS
T ss_pred CCCEEEECCChHH-HHHHHHHHHHCCCE-EEEcCCccc
Confidence 5899999998754 45566666668987 666787774
No 288
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=50.83 E-value=14 Score=36.49 Aligned_cols=39 Identities=13% Similarity=0.072 Sum_probs=30.5
Q ss_pred HHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 86 AASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 86 ~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
++...+.|.+.|+.+++|. ..|-+..+++++.++++|+.
T Consensus 105 ~e~F~~~~~~aGvdG~Iip--DLP~eE~~~~~~~~~~~Gl~ 143 (252)
T 3tha_A 105 LEKFVKKAKSLGICALIVP--ELSFEESDDLIKECERYNIA 143 (252)
T ss_dssp HHHHHHHHHHTTEEEEECT--TCCGGGCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHcCCCEEEeC--CCCHHHHHHHHHHHHHcCCe
Confidence 5778899999999988763 35544577889999999975
No 289
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=50.33 E-value=27 Score=32.89 Aligned_cols=93 Identities=11% Similarity=0.060 Sum_probs=50.9
Q ss_pred CCCCCcEEEEeeCC--cH-HHHHHHhcCCeEEEEEeCCCCCCcccccc--Cc-ee--ecccccCCHHHHhhcCCCccEEE
Q 007482 6 LFSKTTQALFYNYK--QL-PIQRMLDFDFLCVAGIINPGAEGFQKLFF--GQ-EE--IAIPVHSTVEAACAAHPMADVFI 77 (602)
Q Consensus 6 l~~p~s~avv~g~~--~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~--g~-~v--~G~~~y~sv~~i~~~~p~vDlav 77 (602)
-|..+++.|.||.+ |+ +++.|++.|++++.-...+.+. +.+. +- ++ ..+. .++.+... ++|.+|
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~---~~~~~~~~~~~~~~Dl~--~~~~~~~~---~~D~vi 89 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQG---PELRERGASDIVVANLE--EDFSHAFA---SIDAVV 89 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGH---HHHHHTTCSEEEECCTT--SCCGGGGT---TCSEEE
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHH---HHHHhCCCceEEEcccH--HHHHHHHc---CCCEEE
Confidence 35566666665322 22 8888889999874333212111 0000 00 11 1122 55555544 489998
Q ss_pred EecCChh-------------hHHHHHHHhhCCCCcEEEEecC
Q 007482 78 NFSSFRS-------------AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 78 i~vp~~~-------------~~~~~~e~~~~~gv~~~viis~ 106 (602)
.+..... ....++++|.+.+++.+|.+|+
T Consensus 90 ~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 90 FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 7765421 1346788888889998888886
No 290
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=50.26 E-value=18 Score=36.46 Aligned_cols=93 Identities=8% Similarity=-0.016 Sum_probs=52.8
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCc-------ccc-ccCce-eecccccCCHHHHhhcCCCccEEEE
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGF-------QKL-FFGQE-EIAIPVHSTVEAACAAHPMADVFIN 78 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~-------~~~-~~g~~-v~G~~~y~sv~~i~~~~p~vDlavi 78 (602)
++++|+| |.-|. ....|.+.|+++ ..+. ...... ... ++|+. +.-++++.+.+++.+ +.|++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V-~~~~-r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~---~~DlVil 77 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCV-SVVS-RSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELET---KPDCTLL 77 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEE-EEEC-STTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSS---CCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeE-EEEe-CChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCC---CCCEEEE
Confidence 6788887 33344 666677778864 2333 211100 000 22211 112455667766532 3799999
Q ss_pred ecCChhhHHHHHHHhhCCCC---cEEEEecCCCC
Q 007482 79 FSSFRSAAASSMAALKQPTI---RVVAIIAEGVP 109 (602)
Q Consensus 79 ~vp~~~~~~~~~e~~~~~gv---~~~viis~Gf~ 109 (602)
+||+.. ..++++.+.. -+ ..+|.++.|+.
T Consensus 78 avK~~~-~~~~l~~l~~-~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 78 CIKVVE-GADRVGLLRD-AVAPDTGIVLISNGID 109 (320)
T ss_dssp CCCCCT-TCCHHHHHTT-SCCTTCEEEEECSSSS
T ss_pred ecCCCC-hHHHHHHHHh-hcCCCCEEEEeCCCCC
Confidence 999975 5677777753 22 34666788986
No 291
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=50.16 E-value=59 Score=32.04 Aligned_cols=98 Identities=10% Similarity=0.030 Sum_probs=49.1
Q ss_pred CCCcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCC--ccccc-cCcee----ecccccCCHHHHhhcCCCccEE
Q 007482 8 SKTTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEG--FQKLF-FGQEE----IAIPVHSTVEAACAAHPMADVF 76 (602)
Q Consensus 8 ~p~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~--~~~~~-~g~~v----~G~~~y~sv~~i~~~~p~vDla 76 (602)
.|+.+++|.|.+|. +++.|++.|++++.-...+.+.. ..+.+ .+..+ ..+.-..++.++.... ++|.+
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~V 90 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-QPQEV 90 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-CCSEE
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-CCCEE
Confidence 35566666665554 77888889998753332122110 00000 00111 1223334455555432 26988
Q ss_pred EEecCChh-----------------hHHHHHHHhhCCCC-cEEEEecC
Q 007482 77 INFSSFRS-----------------AAASSMAALKQPTI-RVVAIIAE 106 (602)
Q Consensus 77 vi~vp~~~-----------------~~~~~~e~~~~~gv-~~~viis~ 106 (602)
|-+..... ....++++|.+.++ +.+|.+|+
T Consensus 91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 87654311 02246788887786 77777775
No 292
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=49.86 E-value=44 Score=27.65 Aligned_cols=113 Identities=12% Similarity=0.172 Sum_probs=67.3
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|-+|.........+...+.+.|.-+...++.+.+ .++.+.+. ...+|++-++....++.++++.+|+..
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~---------a~~~~~~~-~~dlii~d~~l~~~~g~~~~~~l~~~~ 72 (134)
T 3f6c_A 3 NAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGS---------AVQRVETL-KPDIVIIDVDIPGVNGIQVLETLRKRQ 72 (134)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTEEEEEEESSSTT---------HHHHHHHH-CCSEEEEETTCSSSCHHHHHHHHHHTT
T ss_pred EEEEEcCCHHHHHHHHHHHhhCCcEEEEEcCCHHH---------HHHHHHhc-CCCEEEEecCCCCCChHHHHHHHHhcC
Confidence 36677777777777777777765322223333333 34444332 346777777655577899999999866
Q ss_pred CCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHH
Q 007482 243 VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFE 309 (602)
Q Consensus 243 ~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~ 309 (602)
...|||++-.-....- . .-..++|+ ...-+.++|...++.+..
T Consensus 73 ~~~~ii~~s~~~~~~~-----------------------~-~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~ 119 (134)
T 3f6c_A 73 YSGIIIIVSAKNDHFY-----------------------G-KHCADAGANGFVSKKEGMNNIIAAIEAAKN 119 (134)
T ss_dssp CCSEEEEEECC---CT-----------------------H-HHHHHTTCSEEEEGGGCTHHHHHHHHHHHT
T ss_pred CCCeEEEEeCCCChHH-----------------------H-HHHHHhCCCEEEeCCCCHHHHHHHHHHHHC
Confidence 7778887743222211 1 12234554 334577888888876664
No 293
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=55.22 E-value=3.5 Score=39.17 Aligned_cols=91 Identities=12% Similarity=-0.042 Sum_probs=50.8
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
...++++||| |..|. +.++|.+.|++++ ..+ +... .+.+ .-.|.... +..++.+ +.|+++++||+..
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~-~~~-r~~~--~~~~---~~~g~~~~-~~~~~~~---~aDvVilav~~~~ 85 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVV-FGS-RNPQ--VSSL---LPRGAEVL-CYSEAAS---RSDVIVLAVHREH 85 (201)
Confidence 4566788887 44344 7788888888752 222 2111 1111 11355555 6666544 4799999999864
Q ss_pred hHHHHHHHhhCCC-CcEEEEecCCCCH
Q 007482 85 AAASSMAALKQPT-IRVVAIIAEGVPE 110 (602)
Q Consensus 85 ~~~~~~e~~~~~g-v~~~viis~Gf~E 110 (602)
+..+++ ..... =+.+|-++.|++.
T Consensus 86 -~~~v~~-l~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 86 -YDFLAE-LADSLKGRVLIDVSNNQKM 110 (201)
Confidence 566653 22111 1234445678763
No 294
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=49.63 E-value=69 Score=31.60 Aligned_cols=94 Identities=10% Similarity=0.116 Sum_probs=50.0
Q ss_pred EEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCc-ccc---ccCcee----ecccccCCHHHHhhcCCCccEEEEe
Q 007482 12 QALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGF-QKL---FFGQEE----IAIPVHSTVEAACAAHPMADVFINF 79 (602)
Q Consensus 12 ~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~-~~~---~~g~~v----~G~~~y~sv~~i~~~~p~vDlavi~ 79 (602)
+++|.|.+|- +++.|++.|++++.....+....+ .+. ..+..+ ..+.-..++.++.+.. ++|.+|-+
T Consensus 7 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vih~ 85 (341)
T 3enk_A 7 TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAH-PITAAIHF 85 (341)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHS-CCCEEEEC
T ss_pred EEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhcc-CCcEEEEC
Confidence 4445554443 788888899987533221221100 000 001111 1233344555555533 48998876
Q ss_pred cCChh-----------------hHHHHHHHhhCCCCcEEEEecC
Q 007482 80 SSFRS-----------------AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 80 vp~~~-----------------~~~~~~e~~~~~gv~~~viis~ 106 (602)
..... ....+++.|.+.+++.+|.+|+
T Consensus 86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 86 AALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 53211 1235778888889998988886
No 295
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=49.20 E-value=14 Score=35.36 Aligned_cols=76 Identities=16% Similarity=0.264 Sum_probs=48.9
Q ss_pred HHHHHHHHHhcCCceeEEeeccCCCCCCCC---HHHHHHHhhcCCCccEEEEEEe-cCCC--cHHHHHHHHHhcCCCCCE
Q 007482 174 SNELYNTIARVTDGIYEGIAIGGDVFPGST---LSDHILRFNNIPQVKMMVVLGE-LGGR--DEYSLVEALKQGKVNKPV 247 (602)
Q Consensus 174 ~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~---~~d~l~~l~~Dp~t~~I~ly~E-~g~~--~~~~f~~~~r~~~~~KPV 247 (602)
...+.+.+.+. .+|-+++.. .+.+ +.+.|.++.+|+.+|.|.+|+. +|+. .+....+.+++. +|||
T Consensus 17 ~~~~~~~l~~~-----rii~l~G~I-~~~~a~~i~~~L~~~~~~~~~k~I~l~InSPGG~v~a~~~I~~~i~~~--~~pV 88 (208)
T 2cby_A 17 TDSVYERLLSE-----RIIFLGSEV-NDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYDTMVLA--PCDI 88 (208)
T ss_dssp HHHHHHHHHTT-----TEEEECSCB-CHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHC--SSCE
T ss_pred hhhHHHHhhcC-----cEEEEcCEE-CHHHHHHHHHHHHHHHhCCCCCCEEEEEECCCCCHHHHHHHHHHHHhc--CCCE
Confidence 34555554432 246666664 2222 3455566688899999999999 4432 245677777774 5899
Q ss_pred EEEEeCcCcc
Q 007482 248 VAWVSGTCAR 257 (602)
Q Consensus 248 v~~k~Gr~~~ 257 (602)
+++..|...+
T Consensus 89 ~~~v~g~AaS 98 (208)
T 2cby_A 89 ATYAMGMAAS 98 (208)
T ss_dssp EEEEEEEEET
T ss_pred EEEECcEeHH
Confidence 9999876554
No 296
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=49.02 E-value=1.3e+02 Score=29.81 Aligned_cols=112 Identities=13% Similarity=0.167 Sum_probs=63.0
Q ss_pred CCCHHHHHHHHHHHHhCCCeeEcCCcccccccCcccccccCCcccccccccCCCCCcEEEEecC------hhHHHHHHHH
Q 007482 107 GVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKS------GGMSNELYNT 180 (602)
Q Consensus 107 Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQS------G~l~~~~~~~ 180 (602)
+++|+..+++.+.+++.|-+ ||...- .+ ..-+...|+++..+ ..+...+-..
T Consensus 36 ~vs~~tr~rV~~~~~~lgY~---pn~~a~------~l-------------~~~~~~~Ig~i~~~~~~~~~~~~~~gi~~~ 93 (344)
T 3kjx_A 36 DVSDATRARVLAAAKELGYV---PNKIAG------AL-------------ASNRVNLVAVIIPSLSNMVFPEVLTGINQV 93 (344)
T ss_dssp CCCHHHHHHHHHHHHHHTCC---CCCCCS------CS-------------TTSCCSEEEEEESCSSSSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCC---CCHHHH------Hh-------------hcCCCCEEEEEeCCCCcHHHHHHHHHHHHH
Confidence 68899999999999998865 553210 11 00133456666432 2233344445
Q ss_pred HHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcCCCCCEEEE
Q 007482 181 IARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAW 250 (602)
Q Consensus 181 ~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~~~KPVv~~ 250 (602)
+.+. |+...+...+.. .-...++++.+.+ .++..|++..- ......++.+++ .+.|||++
T Consensus 94 a~~~--g~~~~~~~~~~~--~~~~~~~i~~l~~-~~vdGiIi~~~---~~~~~~~~~l~~--~~iPvV~i 153 (344)
T 3kjx_A 94 LEDT--ELQPVVGVTDYL--PEKEEKVLYEMLS-WRPSGVIIAGL---EHSEAARAMLDA--AGIPVVEI 153 (344)
T ss_dssp HTSS--SSEEEEEECTTC--HHHHHHHHHHHHT-TCCSEEEEECS---CCCHHHHHHHHH--CSSCEEEE
T ss_pred HHHC--CCEEEEEeCCCC--HHHHHHHHHHHHh-CCCCEEEEECC---CCCHHHHHHHHh--CCCCEEEE
Confidence 5544 444455433322 2234566666654 56788877543 222355555554 58999998
No 297
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=48.76 E-value=58 Score=27.09 Aligned_cols=116 Identities=15% Similarity=0.146 Sum_probs=74.1
Q ss_pred CCcEEEEecChhHHHHHHHHHHh-cCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHH
Q 007482 161 PGSVGFVSKSGGMSNELYNTIAR-VTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 239 (602)
Q Consensus 161 ~G~valvSQSG~l~~~~~~~~~~-~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r 239 (602)
.-+|-+|...-.....+...+.+ .|+- .+... .+..+.++++.+.+ ..+|++-++....++.++++.+|
T Consensus 8 ~~~iLivdd~~~~~~~l~~~L~~~~~~~--~v~~~-------~~~~~a~~~l~~~~-~dlii~d~~l~~~~g~~~~~~l~ 77 (143)
T 3cnb_A 8 DFSILIIEDDKEFADMLTQFLENLFPYA--KIKIA-------YNPFDAGDLLHTVK-PDVVMLDLMMVGMDGFSICHRIK 77 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHCTTC--EEEEE-------CSHHHHHHHHHHTC-CSEEEEETTCTTSCHHHHHHHHH
T ss_pred CceEEEEECCHHHHHHHHHHHHhccCcc--EEEEE-------CCHHHHHHHHHhcC-CCEEEEecccCCCcHHHHHHHHH
Confidence 44688999988888888777776 4543 22222 23457778777654 57777776644567889999999
Q ss_pred h--cCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHh
Q 007482 240 Q--GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEK 310 (602)
Q Consensus 240 ~--~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~ 310 (602)
+ .....|||++-.. ... ..... ..++|+ ...-+.++|...++.+..+
T Consensus 78 ~~~~~~~~~ii~~s~~-~~~----------------------~~~~~-~~~~g~~~~l~kP~~~~~l~~~i~~~~~~ 130 (143)
T 3cnb_A 78 STPATANIIVIAMTGA-LTD----------------------DNVSR-IVALGAETCFGKPLNFTLLEKTIKQLVEQ 130 (143)
T ss_dssp TSTTTTTSEEEEEESS-CCH----------------------HHHHH-HHHTTCSEEEESSCCHHHHHHHHHHHHHT
T ss_pred hCccccCCcEEEEeCC-CCH----------------------HHHHH-HHhcCCcEEEeCCCCHHHHHHHHHHHHHh
Confidence 8 3466788887321 111 12222 335564 3456888998888777654
No 298
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=48.42 E-value=34 Score=33.41 Aligned_cols=51 Identities=25% Similarity=0.399 Sum_probs=29.9
Q ss_pred HHHHHHhhcCCCccEEEEEEecC------------------------CCcHHHHHHHHHhcCCCCCEEEEEeCcCccC
Q 007482 205 SDHILRFNNIPQVKMMVVLGELG------------------------GRDEYSLVEALKQGKVNKPVVAWVSGTCARL 258 (602)
Q Consensus 205 ~d~l~~l~~Dp~t~~I~ly~E~g------------------------~~~~~~f~~~~r~~~~~KPVv~~k~Gr~~~g 258 (602)
.+.++.+.+||++|+|++..+ | ...-.++++.+++ ..||||+..-|..-.|
T Consensus 39 ~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~kPvIAav~G~a~Gg 113 (256)
T 3qmj_A 39 AQALLDAADDPQVAVVLLTGS-GRGFSAGTDLAEMQARITDPNFSEGKFGFRGLIKALAG--FPKPLICAVNGLGVGI 113 (256)
T ss_dssp HHHHHHHHHCTTCCEEEEEES-TTEEECCBCHHHHHHHHHSSSCCCCSSHHHHHHHHHHH--CCSCEEEEECSEEETH
T ss_pred HHHHHHHHhCCCceEEEEECC-CCCcccCcCHHHHhhcccchhHHHHHHHHHHHHHHHHh--CCCCEEEEECCeehhH
Confidence 355566666666666666655 3 1111233333333 6899999998866543
No 299
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=48.38 E-value=61 Score=29.18 Aligned_cols=111 Identities=8% Similarity=-0.044 Sum_probs=53.5
Q ss_pred CcEEEEe-eCCcH-HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeeccccc----CCHHHHhhc--CCCccEEEEec
Q 007482 10 TTQALFY-NYKQL-PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIAIPVH----STVEAACAA--HPMADVFINFS 80 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y----~sv~~i~~~--~p~vDlavi~v 80 (602)
++++|+| |..|+ ..+.|.+. |+.++ .+. .... +.+.+. -.|..++ .+.+.+.+. ..++|++|+++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~-vid-~~~~-~~~~~~---~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~ 113 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISL-GIE-IREE-AAQQHR---SEGRNVISGDATDPDFWERILDTGHVKLVLLAM 113 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEE-EEE-SCHH-HHHHHH---HTTCCEEECCTTCHHHHHTBCSCCCCCEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEE-EEE-CCHH-HHHHHH---HCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC
Confidence 4677775 22233 77778887 98864 444 2111 001110 0122221 122211111 12479999999
Q ss_pred CChhhHHHHHHHhhCCC-CcEEEEecCCCCHHHHHHHHHHHHhCCCe-eEcCCc
Q 007482 81 SFRSAAASSMAALKQPT-IRVVAIIAEGVPEADTKQLIAYARSNNKV-VIGPAT 132 (602)
Q Consensus 81 p~~~~~~~~~e~~~~~g-v~~~viis~Gf~E~~~~~l~~~a~~~g~r-iiGPNc 132 (602)
|.......+++.+.+.+ ...+++.+.+ ....+ ..++.|+. ++-|..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~ii~~~~~--~~~~~----~l~~~G~~~vi~p~~ 161 (183)
T 3c85_A 114 PHHQGNQTALEQLQRRNYKGQIAAIAEY--PDQLE----GLLESGVDAAFNIYS 161 (183)
T ss_dssp SSHHHHHHHHHHHHHTTCCSEEEEEESS--HHHHH----HHHHHTCSEEEEHHH
T ss_pred CChHHHHHHHHHHHHHCCCCEEEEEECC--HHHHH----HHHHcCCCEEEchHH
Confidence 87665556666666555 4444444432 22222 33444653 555544
No 300
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=48.33 E-value=9.2 Score=37.86 Aligned_cols=73 Identities=14% Similarity=0.039 Sum_probs=43.4
Q ss_pred CcEEEEeeCCc---H-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhh
Q 007482 10 TTQALFYNYKQ---L-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSA 85 (602)
Q Consensus 10 ~s~avv~g~~~---~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~ 85 (602)
++++|| |.+| . +.+++.+.|++++ .++ +... +.+.+. + .|+.+. +..++.+ +.|+++++||+..
T Consensus 12 m~I~iI-G~tG~mG~~la~~l~~~g~~V~-~~~-r~~~-~~~~~~--~-~g~~~~-~~~~~~~---~aDvVi~av~~~~- 79 (286)
T 3c24_A 12 KTVAIL-GAGGKMGARITRKIHDSAHHLA-AIE-IAPE-GRDRLQ--G-MGIPLT-DGDGWID---EADVVVLALPDNI- 79 (286)
T ss_dssp CEEEEE-TTTSHHHHHHHHHHHHSSSEEE-EEC-CSHH-HHHHHH--H-TTCCCC-CSSGGGG---TCSEEEECSCHHH-
T ss_pred CEEEEE-CCCCHHHHHHHHHHHhCCCEEE-EEE-CCHH-HHHHHH--h-cCCCcC-CHHHHhc---CCCEEEEcCCchH-
Confidence 378877 4422 2 7788888998753 443 3211 111110 1 244443 5555544 4799999999875
Q ss_pred HHHHHHHhh
Q 007482 86 AASSMAALK 94 (602)
Q Consensus 86 ~~~~~e~~~ 94 (602)
+..+++++.
T Consensus 80 ~~~v~~~l~ 88 (286)
T 3c24_A 80 IEKVAEDIV 88 (286)
T ss_dssp HHHHHHHHG
T ss_pred HHHHHHHHH
Confidence 778888775
No 301
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=48.26 E-value=31 Score=34.48 Aligned_cols=93 Identities=6% Similarity=-0.162 Sum_probs=51.5
Q ss_pred CcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCcc-------ccccCce-eecccccCCHHHHhhcCCCccEEEEe
Q 007482 10 TTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQ-------KLFFGQE-EIAIPVHSTVEAACAAHPMADVFINF 79 (602)
Q Consensus 10 ~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~-------~~~~g~~-v~G~~~y~sv~~i~~~~p~vDlavi~ 79 (602)
++++|+| |.-|. ....|.+.|+++ ..+. .+..... ....|+. +..++++.+.+++ + +.|+++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V-~~~~-r~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~-~---~~D~vila 76 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDV-HFLL-RRDYEAIAGNGLKVFSINGDFTLPHVKGYRAPEEI-G---PMDLVLVG 76 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCE-EEEC-STTHHHHHHTCEEEEETTCCEEESCCCEESCHHHH-C---CCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeE-EEEE-cCcHHHHHhCCCEEEcCCCeEEEeeceeecCHHHc-C---CCCEEEEe
Confidence 5789997 45555 566677778774 2332 2111000 0001111 1134456676664 3 47999999
Q ss_pred cCChhhHHHHHHHhhCC-CC-cEEEEecCCCC
Q 007482 80 SSFRSAAASSMAALKQP-TI-RVVAIIAEGVP 109 (602)
Q Consensus 80 vp~~~~~~~~~e~~~~~-gv-~~~viis~Gf~ 109 (602)
||+.. ..++++.+... +- ..+|.+..|+.
T Consensus 77 vk~~~-~~~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 77 LKTFA-NSRYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp CCGGG-GGGHHHHHGGGCCTTCEEEECCSSSS
T ss_pred cCCCC-cHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 99875 66778777531 11 34666678996
No 302
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=48.18 E-value=70 Score=25.79 Aligned_cols=79 Identities=15% Similarity=0.198 Sum_probs=55.1
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecC-CCcHHHHHHHHHhc
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELG-GRDEYSLVEALKQG 241 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g-~~~~~~f~~~~r~~ 241 (602)
+|-+|...-.....+...+.+.|.-+ ... .+..+.++++.+.+ ..+|++-++.. ..++.++++.+|+.
T Consensus 7 ~ilivdd~~~~~~~l~~~L~~~g~~v---~~~-------~~~~~a~~~~~~~~-~dlvi~d~~~~~~~~g~~~~~~l~~~ 75 (127)
T 2gkg_A 7 KILIVESDTALSATLRSALEGRGFTV---DET-------TDGKGSVEQIRRDR-PDLVVLAVDLSAGQNGYLICGKLKKD 75 (127)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCEE---EEE-------CCHHHHHHHHHHHC-CSEEEEESBCGGGCBHHHHHHHHHHS
T ss_pred eEEEEeCCHHHHHHHHHHHHhcCceE---EEe-------cCHHHHHHHHHhcC-CCEEEEeCCCCCCCCHHHHHHHHhcC
Confidence 68888888888888877777655422 222 23457777776643 56777766633 45788999999986
Q ss_pred --CCCCCEEEEEeC
Q 007482 242 --KVNKPVVAWVSG 253 (602)
Q Consensus 242 --~~~KPVv~~k~G 253 (602)
....|||++ ..
T Consensus 76 ~~~~~~~ii~~-~~ 88 (127)
T 2gkg_A 76 DDLKNVPIVII-GN 88 (127)
T ss_dssp TTTTTSCEEEE-EC
T ss_pred ccccCCCEEEE-ec
Confidence 467899999 44
No 303
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=47.45 E-value=82 Score=26.86 Aligned_cols=114 Identities=12% Similarity=0.100 Sum_probs=73.4
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhc
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 241 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~ 241 (602)
-+|-+|..+......+...+.+.|. . +... .+..+.++++.+.+ ..+|++-++....++..+++.+++.
T Consensus 4 ~~ILivdd~~~~~~~l~~~L~~~g~--~-v~~~-------~~~~~a~~~l~~~~-~dliild~~l~~~~g~~~~~~l~~~ 72 (155)
T 1qkk_A 4 PSVFLIDDDRDLRKAMQQTLELAGF--T-VSSF-------ASATEALAGLSADF-AGIVISDIRMPGMDGLALFRKILAL 72 (155)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC--E-EEEE-------SCHHHHHHTCCTTC-CSEEEEESCCSSSCHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCc--E-EEEE-------CCHHHHHHHHHhCC-CCEEEEeCCCCCCCHHHHHHHHHhh
Confidence 4688888888888888777776544 2 2222 23457777776643 5778777775556788999999886
Q ss_pred CCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHh
Q 007482 242 KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEK 310 (602)
Q Consensus 242 ~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~ 310 (602)
....|||++-.- ... .....+ .++|+ ...-+.++|...++.+...
T Consensus 73 ~~~~pii~ls~~-~~~----------------------~~~~~~-~~~g~~~~l~kP~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 73 DPDLPMILVTGH-GDI----------------------PMAVQA-IQDGAYDFIAKPFAADRLVQSARRAEEK 121 (155)
T ss_dssp CTTSCEEEEECG-GGH----------------------HHHHHH-HHTTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECC-CCh----------------------HHHHHH-HhcCCCeEEeCCCCHHHHHHHHHHHHHH
Confidence 677899988321 111 122222 34554 3456888888888766643
No 304
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=47.34 E-value=21 Score=35.21 Aligned_cols=54 Identities=17% Similarity=0.331 Sum_probs=36.0
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCC------cH-----------HHH----HHHHHhc-CCCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGGR------DE-----------YSL----VEALKQG-KVNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~~------~~-----------~~f----~~~~r~~-~~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++-.+ |-+ |- +.+ .+..++. ...||||+..-|..-.|
T Consensus 41 L~~al~~~~~d~~vr~vVltg~-g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 116 (265)
T 3kqf_A 41 LQNILTQINEEANTRVVILTGA-GEKAFCAGADLKERAGMNEEQVRHAVSMIRTTMEMVEQLPQPVIAAINGIALGG 116 (265)
T ss_dssp HHHHHHHHHTCTTCCEEEEEES-SSSEEECCBCHHHHTTCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETH
T ss_pred HHHHHHHHhcCCCceEEEEecC-CCCeeeeCcChHHHhccCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehH
Confidence 4577888889999999999998 611 11 112 2223332 37899999998866543
No 305
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=46.53 E-value=31 Score=33.98 Aligned_cols=50 Identities=14% Similarity=0.084 Sum_probs=36.2
Q ss_pred HHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE----------------cCCcccccccC
Q 007482 89 SMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI----------------GPATVGGIQAG 139 (602)
Q Consensus 89 ~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii----------------GPNc~G~~~~~ 139 (602)
+.| +.+.|...+.++.+-....+.+++++.|++.|+-++ ||..+|+-|.+
T Consensus 116 i~e-a~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~ 181 (251)
T 1i4n_A 116 VKL-ASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRD 181 (251)
T ss_dssp HHH-HHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBC
T ss_pred HHH-HHHcCCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCcc
Confidence 444 445788888888886666677788888888876542 88888877654
No 306
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=46.32 E-value=28 Score=34.58 Aligned_cols=52 Identities=6% Similarity=0.011 Sum_probs=31.0
Q ss_pred ccccCCHHHHhhcCCCccEEEEecCChhh-HHHHHHHhhCCC-CcEEEE-ecCCCCHH
Q 007482 57 IPVHSTVEAACAAHPMADVFINFSSFRSA-AASSMAALKQPT-IRVVAI-IAEGVPEA 111 (602)
Q Consensus 57 ~~~y~sv~~i~~~~p~vDlavi~vp~~~~-~~~~~e~~~~~g-v~~~vi-is~Gf~E~ 111 (602)
+....++++... +.|++|++||.... ...+++++.+.- -..+++ .++|++..
T Consensus 88 i~~~~~~~~~~~---~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~ 142 (302)
T 1f0y_A 88 IATSTDAASVVH---STDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQIT 142 (302)
T ss_dssp EEEESCHHHHTT---SCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHH
T ss_pred eEEecCHHHhhc---CCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHH
Confidence 445667775544 48999999997532 345666665321 123333 46788753
No 307
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=46.13 E-value=48 Score=27.98 Aligned_cols=118 Identities=14% Similarity=0.148 Sum_probs=75.8
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHH
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 239 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r 239 (602)
..-+|-+|...-.....+...+.+.| + .+.... +..+.++++.+. ...+|++-++....++.++++.++
T Consensus 7 ~~~~iLivd~~~~~~~~l~~~L~~~g--~-~v~~~~-------~~~~a~~~l~~~-~~dlii~d~~l~~~~g~~~~~~l~ 75 (147)
T 2zay_A 7 KWWRIMLVDTQLPALAASISALSQEG--F-DIIQCG-------NAIEAVPVAVKT-HPHLIITEANMPKISGMDLFNSLK 75 (147)
T ss_dssp -CEEEEEECTTGGGGHHHHHHHHHHT--E-EEEEES-------SHHHHHHHHHHH-CCSEEEEESCCSSSCHHHHHHHHH
T ss_pred CCceEEEEeCCHHHHHHHHHHHHHcC--C-eEEEeC-------CHHHHHHHHHcC-CCCEEEEcCCCCCCCHHHHHHHHH
Confidence 34578889888888877777777654 4 233322 345777777665 367787777644567889999999
Q ss_pred h--cCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHhHh
Q 007482 240 Q--GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEKLV 312 (602)
Q Consensus 240 ~--~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~~~ 312 (602)
+ .....|||++-.- ... .....+ .++|+ ...-+.++|...++.+.....
T Consensus 76 ~~~~~~~~pii~ls~~-~~~----------------------~~~~~~-~~~g~~~~l~kp~~~~~L~~~i~~~~~~~~ 130 (147)
T 2zay_A 76 KNPQTASIPVIALSGR-ATA----------------------KEEAQL-LDMGFIDFIAKPVNAIRLSARIKRVLKLLY 130 (147)
T ss_dssp TSTTTTTSCEEEEESS-CCH----------------------HHHHHH-HHHTCSEEEESSCCHHHHHHHHHHHHHHHC
T ss_pred cCcccCCCCEEEEeCC-CCH----------------------HHHHHH-HhCCCCEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 8 4467899988321 111 222222 34555 345688999988887776543
No 308
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=46.00 E-value=53 Score=32.71 Aligned_cols=30 Identities=10% Similarity=0.064 Sum_probs=19.0
Q ss_pred CCCcEEEEee--CCcH-HHHHHHhcCCeEEEEE
Q 007482 8 SKTTQALFYN--YKQL-PIQRMLDFDFLCVAGI 37 (602)
Q Consensus 8 ~p~s~avv~g--~~~~-~~~~~~~~g~~~V~gv 37 (602)
.++++.|.|| +-|+ +++.|++.|+++++-.
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 56 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLD 56 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 4566666653 2233 7888889999875333
No 309
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=45.55 E-value=32 Score=33.52 Aligned_cols=85 Identities=5% Similarity=-0.042 Sum_probs=49.9
Q ss_pred CcEEEEe-e-CCcHHHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhHH
Q 007482 10 TTQALFY-N-YKQLPIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAA 87 (602)
Q Consensus 10 ~s~avv~-g-~~~~~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~ 87 (602)
++++||| | +++.+.+.|.+.|++++ +++ . .+++ . +.| +++||.. .+.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~-~~~-~----------------------~~~~-~---~aD--ilavP~~-ai~ 55 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVT-VLH-A----------------------PEDI-R---DFE--LVVIDAH-GVE 55 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEE-ECS-S----------------------GGGG-G---GCS--EEEECSS-CHH
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEE-Eec-C----------------------HHHh-c---cCC--EEEEcHH-HHH
Confidence 5789887 4 44448888888898742 332 1 1333 3 268 8899997 578
Q ss_pred HHHHHhhCC-CCcEEEEecCC-CCHHHHHHHHHHHHhCCCeeEc
Q 007482 88 SSMAALKQP-TIRVVAIIAEG-VPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 88 ~~~e~~~~~-gv~~~viis~G-f~E~~~~~l~~~a~~~g~riiG 129 (602)
.+++.+... .-..+|+-++| .+. ++.+.+++.|.+++|
T Consensus 56 ~vl~~l~~~l~~g~ivvd~sgs~~~----~vl~~~~~~g~~fvg 95 (232)
T 3dfu_A 56 GYVEKLSAFARRGQMFLHTSLTHGI----TVMDPLETSGGIVMS 95 (232)
T ss_dssp HHHHHHHTTCCTTCEEEECCSSCCG----GGGHHHHHTTCEEEE
T ss_pred HHHHHHHHhcCCCCEEEEECCcCHH----HHHHHHHhCCCcEEE
Confidence 888887642 22345554455 443 233333455655544
No 310
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=45.23 E-value=73 Score=26.52 Aligned_cols=82 Identities=13% Similarity=0.176 Sum_probs=56.6
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHH
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 239 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r 239 (602)
+.-+|-+|..+-.....+...+.+.|. .+... -+..+.++.+.+.....+|++-++....++-++++.+|
T Consensus 14 ~~~~ilivdd~~~~~~~l~~~L~~~g~---~v~~~-------~~~~~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~l~ 83 (138)
T 2b4a_A 14 QPFRVTLVEDEPSHATLIQYHLNQLGA---EVTVH-------PSGSAFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVK 83 (138)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHTTC---EEEEE-------SSHHHHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHHcCC---EEEEe-------CCHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 456799999999888888888876643 22222 23457788776613456777766644457889999998
Q ss_pred hcCCCCCEEEEE
Q 007482 240 QGKVNKPVVAWV 251 (602)
Q Consensus 240 ~~~~~KPVv~~k 251 (602)
+.....|||++-
T Consensus 84 ~~~~~~~ii~ls 95 (138)
T 2b4a_A 84 EQTKQPSVLILT 95 (138)
T ss_dssp TSSSCCEEEEEE
T ss_pred hhCCCCCEEEEE
Confidence 855677888874
No 311
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=44.94 E-value=57 Score=35.04 Aligned_cols=86 Identities=7% Similarity=-0.050 Sum_probs=44.9
Q ss_pred CCcEEEEee--CCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh-
Q 007482 9 KTTQALFYN--YKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS- 84 (602)
Q Consensus 9 p~s~avv~g--~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~- 84 (602)
+++|.|.|| .-|+ +++.|++.|+++++-...+.+. +.+.+-.. ..+.++.. ++|.+|-+.....
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------~~v~~d~~-~~~~~~l~---~~D~Vih~A~~~~~ 214 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------GKRFWDPL-NPASDLLD---GADVLVHLAGEPIF 214 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------TCEECCTT-SCCTTTTT---TCSEEEECCCC---
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------cceeeccc-chhHHhcC---CCCEEEECCCCccc
Confidence 566666653 2233 7888889999875333322221 11211111 12233332 4799887654320
Q ss_pred -----------------hHHHHHHH-hhCCCCcEEEEecC
Q 007482 85 -----------------AAASSMAA-LKQPTIRVVAIIAE 106 (602)
Q Consensus 85 -----------------~~~~~~e~-~~~~gv~~~viis~ 106 (602)
....++++ |.+.+++.+|.+|+
T Consensus 215 ~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS 254 (516)
T 3oh8_A 215 GRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASA 254 (516)
T ss_dssp --CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEE
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCc
Confidence 02345666 56667887777765
No 312
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=44.82 E-value=78 Score=31.56 Aligned_cols=94 Identities=13% Similarity=-0.047 Sum_probs=49.2
Q ss_pred CCCcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCC-Cccc---cc--cCcee--ecccccCCHHHHhhcCCCccE
Q 007482 8 SKTTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAE-GFQK---LF--FGQEE--IAIPVHSTVEAACAAHPMADV 75 (602)
Q Consensus 8 ~p~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~-~~~~---~~--~g~~v--~G~~~y~sv~~i~~~~p~vDl 75 (602)
+++++.|.| .+|. +++.|++.|++++.-...+... .+.. .+ .+-++ ..+.-..++.++..+. ++|.
T Consensus 9 ~~~~IlVtG-atG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~-~~d~ 86 (346)
T 3i6i_A 9 PKGRVLIAG-ATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH-EIDI 86 (346)
T ss_dssp --CCEEEEC-TTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT-TCCE
T ss_pred CCCeEEEEC-CCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC-CCCE
Confidence 345666665 4333 8888888898864333212110 0000 00 01111 1222344555555533 3899
Q ss_pred EEEecCCh--hhHHHHHHHhhCCC-CcEEEE
Q 007482 76 FINFSSFR--SAAASSMAALKQPT-IRVVAI 103 (602)
Q Consensus 76 avi~vp~~--~~~~~~~e~~~~~g-v~~~vi 103 (602)
+|.+.+.. .....++++|.+.| ++.+|.
T Consensus 87 Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 87 VVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp EEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred EEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 88776542 22457889998888 998764
No 313
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=44.79 E-value=32 Score=33.78 Aligned_cols=82 Identities=7% Similarity=0.011 Sum_probs=45.8
Q ss_pred CcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh-
Q 007482 10 TTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS- 84 (602)
Q Consensus 10 ~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~- 84 (602)
+++.|. |.+|. +++.|++.|++++. +. .... ..+.-..++.++.... ++|.+|-+.....
T Consensus 4 ~~ilVt-GatG~iG~~l~~~L~~~g~~v~~-~~-r~~~-----------~D~~d~~~~~~~~~~~-~~d~vih~a~~~~~ 68 (321)
T 1e6u_A 4 QRVFIA-GHRGMVGSAIRRQLEQRGDVELV-LR-TRDE-----------LNLLDSRAVHDFFASE-RIDQVYLAAAKVGG 68 (321)
T ss_dssp EEEEEE-TTTSHHHHHHHHHHTTCTTEEEE-CC-CTTT-----------CCTTCHHHHHHHHHHH-CCSEEEECCCCCCC
T ss_pred CEEEEE-CCCcHHHHHHHHHHHhCCCeEEE-Ee-cCcc-----------CCccCHHHHHHHHHhc-CCCEEEEcCeecCC
Confidence 455555 54443 77788888987542 22 1111 1122234555555422 3798887654321
Q ss_pred -----------------hHHHHHHHhhCCCCcEEEEecC
Q 007482 85 -----------------AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 85 -----------------~~~~~~e~~~~~gv~~~viis~ 106 (602)
....++++|.+.+++.+|.+|+
T Consensus 69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 69 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 1235677887788888877776
No 314
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=44.55 E-value=1.4e+02 Score=25.20 Aligned_cols=117 Identities=10% Similarity=0.088 Sum_probs=78.3
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHH
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 239 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r 239 (602)
..-+|-+|.........+...+.+.| +. +... .+..+.++.+.+. ...+|++-++....++-+|++.+|
T Consensus 13 ~~~~ILivdd~~~~~~~l~~~L~~~g--~~-v~~~-------~~~~~a~~~l~~~-~~dlvi~D~~l~~~~g~~~~~~l~ 81 (153)
T 3hv2_A 13 RRPEILLVDSQEVILQRLQQLLSPLP--YT-LHFA-------RDATQALQLLASR-EVDLVISAAHLPQMDGPTLLARIH 81 (153)
T ss_dssp SCCEEEEECSCHHHHHHHHHHHTTSS--CE-EEEE-------SSHHHHHHHHHHS-CCSEEEEESCCSSSCHHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHhcccC--cE-EEEE-------CCHHHHHHHHHcC-CCCEEEEeCCCCcCcHHHHHHHHH
Confidence 45689999999999888888887664 32 2222 2455778877665 367888777755577899999999
Q ss_pred hcCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcC-C----cccCCHHHHHHHHHHHHHhH
Q 007482 240 QGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG-A----VVPTSYEAFESAIKETFEKL 311 (602)
Q Consensus 240 ~~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaG-v----i~v~~~~el~~~~~~~~~~~ 311 (602)
+.....|||++-. .... ..... .-++| + ...-+.++|...++.++.+.
T Consensus 82 ~~~~~~~ii~~s~-~~~~----------------------~~~~~-~~~~g~~~~~l~KP~~~~~l~~~i~~~l~~~ 134 (153)
T 3hv2_A 82 QQYPSTTRILLTG-DPDL----------------------KLIAK-AINEGEIYRYLSKPWDDQELLLALRQALEHQ 134 (153)
T ss_dssp HHCTTSEEEEECC-CCCH----------------------HHHHH-HHHTTCCSEEECSSCCHHHHHHHHHHHHHHH
T ss_pred hHCCCCeEEEEEC-CCCH----------------------HHHHH-HHhCCCcceEEeCCCCHHHHHHHHHHHHHHh
Confidence 8667788888732 1111 22223 33455 3 34568899999888777543
No 315
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=44.26 E-value=1.1e+02 Score=25.29 Aligned_cols=117 Identities=10% Similarity=0.082 Sum_probs=75.0
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHh
Q 007482 161 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 240 (602)
Q Consensus 161 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~ 240 (602)
+-+|-+|.........+...+.+.|.-+ ... .+..+.++.+.+.+ ..+|++-++....++.+|++.+|+
T Consensus 6 ~~~iLivdd~~~~~~~l~~~l~~~g~~v---~~~-------~~~~~a~~~l~~~~-~dlvi~d~~l~~~~g~~~~~~l~~ 74 (140)
T 3grc_A 6 RPRILICEDDPDIARLLNLMLEKGGFDS---DMV-------HSAAQALEQVARRP-YAAMTVDLNLPDQDGVSLIRALRR 74 (140)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHTTCEE---EEE-------CSHHHHHHHHHHSC-CSEEEECSCCSSSCHHHHHHHHHT
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHCCCeE---EEE-------CCHHHHHHHHHhCC-CCEEEEeCCCCCCCHHHHHHHHHh
Confidence 3478999999988888888887755432 222 24557788776654 567777666555778999999998
Q ss_pred --cCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHhH
Q 007482 241 --GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEKL 311 (602)
Q Consensus 241 --~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~~ 311 (602)
.....|||++-...... .....+.++|+ ...-+.++|...++.++.+.
T Consensus 75 ~~~~~~~~ii~~s~~~~~~-----------------------~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~l~~~ 128 (140)
T 3grc_A 75 DSRTRDLAIVVVSANAREG-----------------------ELEFNSQPLAVSTWLEKPIDENLLILSLHRAIDNM 128 (140)
T ss_dssp SGGGTTCEEEEECTTHHHH-----------------------HHHHCCTTTCCCEEECSSCCHHHHHHHHHHHHHHH
T ss_pred CcccCCCCEEEEecCCChH-----------------------HHHHHhhhcCCCEEEeCCCCHHHHHHHHHHHHHhc
Confidence 34677888873221111 00001223343 34568899998888777654
No 316
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=44.19 E-value=37 Score=33.87 Aligned_cols=91 Identities=13% Similarity=0.040 Sum_probs=54.9
Q ss_pred HhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCee---------------EcCCcccccccCcccccccCCcccccccc
Q 007482 92 ALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV---------------IGPATVGGIQAGAFKIGDTAGTIDNIIHC 156 (602)
Q Consensus 92 ~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~ri---------------iGPNc~G~~~~~~~~l~~~~~~~~~~~p~ 156 (602)
++.+.|+..++++++-....+.+++++.|++.|+.+ +|+..+|+-|.....+ ...+......
T Consensus 137 ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l~t~---~~dl~~~~~L 213 (272)
T 3tsm_A 137 EARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNLRSF---EVNLAVSERL 213 (272)
T ss_dssp HHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCTTTC---CBCTHHHHHH
T ss_pred HHHHcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCCccC---CCChHHHHHH
Confidence 344589999999998887777788888888888753 4777788765432111 0111100000
Q ss_pred cCCCCCcEEEEecChhHHHHHHHHHHhcC
Q 007482 157 KLYRPGSVGFVSKSGGMSNELYNTIARVT 185 (602)
Q Consensus 157 ~~~~~G~valvSQSG~l~~~~~~~~~~~g 185 (602)
...-|.++-+|+-||--..+=+..+.+.|
T Consensus 214 ~~~ip~~~~vIaesGI~t~edv~~l~~~G 242 (272)
T 3tsm_A 214 AKMAPSDRLLVGESGIFTHEDCLRLEKSG 242 (272)
T ss_dssp HHHSCTTSEEEEESSCCSHHHHHHHHTTT
T ss_pred HHhCCCCCcEEEECCCCCHHHHHHHHHcC
Confidence 01134567788888876666555555444
No 317
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=44.06 E-value=28 Score=34.08 Aligned_cols=54 Identities=26% Similarity=0.328 Sum_probs=36.3
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--C---c---------HHHHHHHHHhcC-CCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG--R---D---------EYSLVEALKQGK-VNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~--~---~---------~~~f~~~~r~~~-~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++..+ |- . | .+.+.+..++.. ..||||+..-|..-.|
T Consensus 38 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 106 (255)
T 3p5m_A 38 LSVHIRDAEADESVRAVLLTGA-GRAFCSGGDLTGGDTAGAADAANRVVRAITSLPKPVIAGVHGAAVGF 106 (255)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-SSCSBCEECC---CHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETH
T ss_pred HHHHHHHHhhCCCeEEEEEECC-CCCccCCCChhhhcchHHHHHHHHHHHHHHhCCCCEEEEeCCeehhh
Confidence 5577888889999999999988 61 0 1 112223333332 7899999998876543
No 318
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=43.93 E-value=1.1e+02 Score=30.21 Aligned_cols=99 Identities=13% Similarity=0.102 Sum_probs=56.3
Q ss_pred HHHHHHhcCCeEEEEEeCCCCCCccccccCceee---------cc---cccCCHHHHhhcCCCccEEEEec-CC--hhhH
Q 007482 22 PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEI---------AI---PVHSTVEAACAAHPMADVFINFS-SF--RSAA 86 (602)
Q Consensus 22 ~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~---------G~---~~y~sv~~i~~~~p~vDlavi~v-p~--~~~~ 86 (602)
.++.|.+.|-.+|--=+ |-.+ -...|..++ |. .++.-++++-+..+++-+++..- .+ ..-+
T Consensus 39 ~~~~l~~~GaD~iElGi-PfSD---P~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~ 114 (271)
T 3nav_A 39 IMQTLIDAGADALELGM-PFSD---PLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGI 114 (271)
T ss_dssp HHHHHHHTTCSSEEEEC-CCCC---GGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCH
T ss_pred HHHHHHHcCCCEEEECC-CCCC---CCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhH
Confidence 77788888876532222 5211 022344554 22 34556666543312344544321 11 1224
Q ss_pred HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 87 ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 87 ~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
+...++|.+.|+..+++. ..+-+..+++++.++++|+.
T Consensus 115 ~~f~~~~~~aGvdGvIip--Dlp~ee~~~~~~~~~~~gl~ 152 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLIA--DVPTNESQPFVAAAEKFGIQ 152 (271)
T ss_dssp HHHHHHHHHHTCCEEEET--TSCGGGCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHCCCCEEEEC--CCCHHHHHHHHHHHHHcCCe
Confidence 677889999999988873 34434567899999999975
No 319
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=43.80 E-value=25 Score=36.10 Aligned_cols=105 Identities=12% Similarity=0.040 Sum_probs=63.8
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
++-+++.||| |.-|+ ..+.+..+|++++ +.+ |..... ....|. .|.++.|++.+ .|++++.+|...
T Consensus 139 l~g~tvGIiG~G~IG~~va~~~~~fg~~v~-~~d-~~~~~~------~~~~~~-~~~~l~ell~~---sDivslh~Plt~ 206 (334)
T 3kb6_A 139 LNRLTLGVIGTGRIGSRVAMYGLAFGMKVL-CYD-VVKRED------LKEKGC-VYTSLDELLKE---SDVISLHVPYTK 206 (334)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-SSCCHH------HHHTTC-EECCHHHHHHH---CSEEEECCCCCT
T ss_pred ecCcEEEEECcchHHHHHHHhhcccCceee-ecC-Cccchh------hhhcCc-eecCHHHHHhh---CCEEEEcCCCCh
Confidence 3445788886 44444 6677777999865 444 422110 011122 36799999874 699999999743
Q ss_pred hH-----HHHHHHhhCCCCcEEEEecCCCCHH-HHHHHHHHHHhCCCee
Q 007482 85 AA-----ASSMAALKQPTIRVVAIIAEGVPEA-DTKQLIAYARSNNKVV 127 (602)
Q Consensus 85 ~~-----~~~~e~~~~~gv~~~viis~Gf~E~-~~~~l~~~a~~~g~ri 127 (602)
.. ...++.+. +.+++|-.+=++. +++.|++..++..+.=
T Consensus 207 ~T~~li~~~~l~~mk----~~a~lIN~aRG~iVde~aL~~aL~~g~i~g 251 (334)
T 3kb6_A 207 ETHHMINEERISLMK----DGVYLINTARGKVVDTDALYRAYQRGKFSG 251 (334)
T ss_dssp TTTTCBCHHHHHHSC----TTEEEEECSCGGGBCHHHHHHHHHTTCEEE
T ss_pred hhccCcCHHHHhhcC----CCeEEEecCccccccHHHHHHHHHhCCceE
Confidence 22 24555554 2345555554444 7888988888765543
No 320
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=43.59 E-value=62 Score=27.33 Aligned_cols=81 Identities=10% Similarity=-0.057 Sum_probs=50.1
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|-+|.-+-.....+...+...+.|+..+-.. .+..+.++++.+. ...+|++-+.....++.++++.+++..
T Consensus 4 ~ILivdd~~~~~~~l~~~L~~~~~~~~~~~~~-------~~~~~al~~~~~~-~~dlvllD~~lp~~~g~~l~~~l~~~~ 75 (141)
T 3cu5_A 4 RILIVDDEKLTRDGLIANINWKALSFDQIDQA-------DDGINAIQIALKH-PPNVLLTDVRMPRMDGIELVDNILKLY 75 (141)
T ss_dssp EEEEECSCHHHHHHHHHHCCGGGSCCSEEEEE-------SSHHHHHHHHTTS-CCSEEEEESCCSSSCHHHHHHHHHHHC
T ss_pred eEEEEeCCHHHHHHHHHHHHHccCCcEEeeec-------ccHHHHHHHHhcC-CCCEEEEeCCCCCCCHHHHHHHHHhhC
Confidence 35566666655555555554444555432122 2345777777654 356777766644467889999998865
Q ss_pred CCCCEEEEE
Q 007482 243 VNKPVVAWV 251 (602)
Q Consensus 243 ~~KPVv~~k 251 (602)
...|||++-
T Consensus 76 ~~~~ii~ls 84 (141)
T 3cu5_A 76 PDCSVIFMS 84 (141)
T ss_dssp TTCEEEEEC
T ss_pred CCCcEEEEe
Confidence 677888773
No 321
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=43.53 E-value=1e+02 Score=28.61 Aligned_cols=93 Identities=6% Similarity=-0.068 Sum_probs=48.8
Q ss_pred CCcEEEEeeCCcH----HHHHHHhcCC--eEEEEEeCCCCCCccccccCce--eecccccCCHHHHhhcCCCccEEEEec
Q 007482 9 KTTQALFYNYKQL----PIQRMLDFDF--LCVAGIINPGAEGFQKLFFGQE--EIAIPVHSTVEAACAAHPMADVFINFS 80 (602)
Q Consensus 9 p~s~avv~g~~~~----~~~~~~~~g~--~~V~gv~~p~~~~~~~~~~g~~--v~G~~~y~sv~~i~~~~p~vDlavi~v 80 (602)
.+++.|. |.+|. +++.|++.|+ +++.....+.+..... ..+-+ ...+.-..++.++.+ ++|.+|.+.
T Consensus 18 ~~~vlVt-Gasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~a 92 (242)
T 2bka_A 18 NKSVFIL-GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKLDDYASAFQ---GHDVGFCCL 92 (242)
T ss_dssp CCEEEEE-CTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGGGGGGGGGS---SCSEEEECC
T ss_pred CCeEEEE-CCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-cCCceEEecCcCCHHHHHHHhc---CCCEEEECC
Confidence 3455555 44333 7788888898 7643322132211000 00000 122223344544443 479988876
Q ss_pred CChh--------------hHHHHHHHhhCCCCcEEEEecC
Q 007482 81 SFRS--------------AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 81 p~~~--------------~~~~~~e~~~~~gv~~~viis~ 106 (602)
.... ....++++|.+.+++.+|.+|+
T Consensus 93 g~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 93 GTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp CCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 5421 1235677787788888888887
No 322
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=43.44 E-value=1.4e+02 Score=25.12 Aligned_cols=117 Identities=18% Similarity=0.144 Sum_probs=75.6
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhh--------cCCCccEEEEEEecCCCcHHH
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFN--------NIPQVKMMVVLGELGGRDEYS 233 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~--------~Dp~t~~I~ly~E~g~~~~~~ 233 (602)
-+|-+|.-.-.....+...+.+.|.... +.. -.+..+.++++. ......+|++=++....++.+
T Consensus 5 ~~ILivddd~~~~~~l~~~L~~~g~~~~-v~~-------~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~ 76 (152)
T 3heb_A 5 VTIVMIEDDLGHARLIEKNIRRAGVNNE-IIA-------FTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGID 76 (152)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCCCC-EEE-------ESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCCcce-EEE-------eCCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHH
Confidence 3678888888777777777776654221 222 234558888886 445567777766655678999
Q ss_pred HHHHHHh--cCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHH
Q 007482 234 LVEALKQ--GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKET 307 (602)
Q Consensus 234 f~~~~r~--~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~ 307 (602)
+++.+|+ .....|||++-.... .....-+.++|+. ..-+.++|...++.+
T Consensus 77 ~~~~lr~~~~~~~~pii~~t~~~~------------------------~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~ 132 (152)
T 3heb_A 77 ILKLVKENPHTRRSPVVILTTTDD------------------------QREIQRCYDLGANVYITKPVNYENFANAIRQL 132 (152)
T ss_dssp HHHHHHHSTTTTTSCEEEEESCCC------------------------HHHHHHHHHTTCSEEEECCSSHHHHHHHHHHH
T ss_pred HHHHHHhcccccCCCEEEEecCCC------------------------HHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHH
Confidence 9999998 446779988842211 1122233456653 356888998888877
Q ss_pred HHh
Q 007482 308 FEK 310 (602)
Q Consensus 308 ~~~ 310 (602)
...
T Consensus 133 ~~~ 135 (152)
T 3heb_A 133 GLF 135 (152)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 323
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=43.07 E-value=41 Score=28.80 Aligned_cols=80 Identities=14% Similarity=0.008 Sum_probs=50.8
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|-+|.........+...+.+. -|+..+.... +..+.++.+.++....+|++-++....++.++++.+++..
T Consensus 5 ~iLivdd~~~~~~~l~~~L~~~-~g~~~v~~~~-------~~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~ 76 (154)
T 2qsj_A 5 VVLIVDDHHLIRAGAKNLLEGA-FSGMRVEGAE-------TVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFD 76 (154)
T ss_dssp EEEEECSCHHHHHHHHHHHHHH-CTTEEEEEES-------SHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHC
T ss_pred EEEEEcCCHHHHHHHHHHHHhC-CCceEEEEec-------CHHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhC
Confidence 4777888877777777777655 1333333332 3458888887745567777766633346778899988866
Q ss_pred CCCCEEEE
Q 007482 243 VNKPVVAW 250 (602)
Q Consensus 243 ~~KPVv~~ 250 (602)
...|||++
T Consensus 77 ~~~~ii~l 84 (154)
T 2qsj_A 77 PSNAVALI 84 (154)
T ss_dssp TTSEEEEC
T ss_pred CCCeEEEE
Confidence 67788887
No 324
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=42.81 E-value=7 Score=39.53 Aligned_cols=94 Identities=6% Similarity=-0.068 Sum_probs=53.1
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCC--ccccccCce-eecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEG--FQKLFFGQE-EIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~--~~~~~~g~~-v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
-++++||| |..|. +.+++. .||.++ ..+ +.... +.....-++ ..++....|++++ . +.|++|.++|..
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~-v~d-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~-~---~aDlVieavpe~ 84 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVV-LQD-VSEKALEAAREQIPEELLSKIEFTTTLEKV-K---DCDIVMEAVFED 84 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEE-EEC-SCHHHHHHHHHHSCGGGGGGEEEESSCTTG-G---GCSEEEECCCSC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEE-EEE-CCHHHHHHHHHHHHHHHhCCeEEeCCHHHH-c---CCCEEEEcCcCC
Confidence 46889997 44444 888899 999852 343 32110 000000001 1245556677663 4 379999999987
Q ss_pred hhH-HHHHHHhhCCCCcEEEEe--cCCCCHH
Q 007482 84 SAA-ASSMAALKQPTIRVVAII--AEGVPEA 111 (602)
Q Consensus 84 ~~~-~~~~e~~~~~gv~~~vii--s~Gf~E~ 111 (602)
..+ ..+++++... +..|+. ||.++.+
T Consensus 85 ~~vk~~l~~~l~~~--~~~IlasntSti~~~ 113 (293)
T 1zej_A 85 LNTKVEVLREVERL--TNAPLCSNTSVISVD 113 (293)
T ss_dssp HHHHHHHHHHHHTT--CCSCEEECCSSSCHH
T ss_pred HHHHHHHHHHHhcC--CCCEEEEECCCcCHH
Confidence 544 3454556644 554443 5678764
No 325
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=42.19 E-value=81 Score=32.01 Aligned_cols=91 Identities=10% Similarity=0.025 Sum_probs=46.3
Q ss_pred EEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccccCce--eecccccCCHHHHhhcCCCccEEEEecCChh-
Q 007482 12 QALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQE--EIAIPVHSTVEAACAAHPMADVFINFSSFRS- 84 (602)
Q Consensus 12 ~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~--v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~- 84 (602)
+++|-|.+|. +++.|++.|++++.-...+.+.... ...+-+ ...+.-..++.++.+ ++|.+|-+.....
T Consensus 31 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~---~~d~Vih~A~~~~~ 106 (379)
T 2c5a_A 31 KISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-DMFCDEFHLVDLRVMENCLKVTE---GVDHVFNLAADMGG 106 (379)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-GGTCSEEEECCTTSHHHHHHHHT---TCSEEEECCCCCCC
T ss_pred eEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-ccCCceEEECCCCCHHHHHHHhC---CCCEEEECceecCc
Confidence 4445455444 7788888999875333212221000 000001 112223334555543 3788876654211
Q ss_pred -----------------hHHHHHHHhhCCCCcEEEEecC
Q 007482 85 -----------------AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 85 -----------------~~~~~~e~~~~~gv~~~viis~ 106 (602)
....++++|.+.+++.+|.+|+
T Consensus 107 ~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 107 MGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 0125677777778887877775
No 326
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=41.86 E-value=41 Score=29.18 Aligned_cols=81 Identities=11% Similarity=0.082 Sum_probs=57.6
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCC-CccEEEEEEecCCCcHHHHHHHHHh
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIP-QVKMMVVLGELGGRDEYSLVEALKQ 240 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp-~t~~I~ly~E~g~~~~~~f~~~~r~ 240 (602)
=+|-+|...-.....+...+.+.|+-+-. .. .+..+.++.+.+.+ ...+|++-++....++..+++.+|+
T Consensus 37 ~~Ilivdd~~~~~~~l~~~L~~~g~~v~~--~~-------~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~ 107 (157)
T 3hzh_A 37 FNVLIVDDSVFTVKQLTQIFTSEGFNIID--TA-------ADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIME 107 (157)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEE--EE-------SSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEE--EE-------CCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHh
Confidence 37999999998888888888776533211 22 23457777776642 4567777766555778999999998
Q ss_pred cCCCCCEEEEE
Q 007482 241 GKVNKPVVAWV 251 (602)
Q Consensus 241 ~~~~KPVv~~k 251 (602)
.....|||++-
T Consensus 108 ~~~~~~ii~ls 118 (157)
T 3hzh_A 108 FDKNARVIMIS 118 (157)
T ss_dssp HCTTCCEEEEE
T ss_pred hCCCCcEEEEe
Confidence 77788988883
No 327
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=41.66 E-value=64 Score=31.94 Aligned_cols=31 Identities=10% Similarity=-0.173 Sum_probs=19.9
Q ss_pred CCCCCCcEEEEeeCC--cH-HHHHHHhcCCeEEE
Q 007482 5 QLFSKTTQALFYNYK--QL-PIQRMLDFDFLCVA 35 (602)
Q Consensus 5 ~l~~p~s~avv~g~~--~~-~~~~~~~~g~~~V~ 35 (602)
..++.+++.|.||.+ |+ +++.|++.|++++.
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~ 49 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILV 49 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEE
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 456666666665322 23 77888889998753
No 328
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=41.42 E-value=11 Score=35.64 Aligned_cols=90 Identities=11% Similarity=0.007 Sum_probs=49.7
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhH
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAA 86 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~ 86 (602)
.++++||| |..|+ +.+.+.+.|++++ .++ .... +.+.+.. .|+..+ +..++.. +.|++++++|+.. .
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~-~~~-r~~~-~~~~~~~---~g~~~~-~~~~~~~---~~DvVi~av~~~~-~ 96 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVV-VGS-RNPK-RTARLFP---SAAQVT-FQEEAVS---SPEVIFVAVFREH-Y 96 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEE-EEE-SSHH-HHHHHSB---TTSEEE-EHHHHTT---SCSEEEECSCGGG-S
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEE-EEe-CCHH-HHHHHHH---cCCcee-cHHHHHh---CCCEEEECCChHH-H
Confidence 35788886 23233 7788888888753 344 3211 1111111 145544 6777654 4899999999753 4
Q ss_pred HHHHH--HhhCCCCcEEEEecCCCCHH
Q 007482 87 ASSMA--ALKQPTIRVVAIIAEGVPEA 111 (602)
Q Consensus 87 ~~~~e--~~~~~gv~~~viis~Gf~E~ 111 (602)
..+++ ... .+ +.++-+++|.+..
T Consensus 97 ~~v~~l~~~~-~~-~~vv~~s~g~~~~ 121 (215)
T 2vns_A 97 SSLCSLSDQL-AG-KILVDVSNPTEQE 121 (215)
T ss_dssp GGGGGGHHHH-TT-CEEEECCCCCHHH
T ss_pred HHHHHHHHhc-CC-CEEEEeCCCcccc
Confidence 44443 122 22 3456667788643
No 329
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=41.40 E-value=21 Score=33.50 Aligned_cols=53 Identities=15% Similarity=0.166 Sum_probs=38.3
Q ss_pred HHHHHHHhhcCCCccEEEEEEe-cCCC--cHHHHHHHHHhcCCCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGE-LGGR--DEYSLVEALKQGKVNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E-~g~~--~~~~f~~~~r~~~~~KPVv~~k~Gr~~~g 258 (602)
+...|.++..|+.+|.|.||+. +|+. .+....+.+++. ++||+++..|...++
T Consensus 43 i~~~L~~l~~~~~~~~I~l~InSPGG~v~a~~~I~~~i~~~--~~pV~~~v~g~AaS~ 98 (193)
T 1yg6_A 43 IVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI--KPDVSTICMGQAASM 98 (193)
T ss_dssp HHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHS--SSCEEEEEEEEEETH
T ss_pred HHHHHHHHHhcCCCCCEEEEEECcCCCHHHHHHHHHHHHhc--CCCEEEEEeeeHHHH
Confidence 3445667777888999999999 4442 356777777774 589999998766543
No 330
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=41.10 E-value=5.1 Score=40.65 Aligned_cols=109 Identities=15% Similarity=0.108 Sum_probs=58.0
Q ss_pred CCCcEEEEe-eCCcH-HHHHHHhc-CCeEEEEEeCCCCCCccccccCceeec--ccccCCHHHHhhcCCCccEEEEecCC
Q 007482 8 SKTTQALFY-NYKQL-PIQRMLDF-DFLCVAGIINPGAEGFQKLFFGQEEIA--IPVHSTVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~~~~~-g~~~V~gv~~p~~~~~~~~~~g~~v~G--~~~y~sv~~i~~~~p~vDlavi~vp~ 82 (602)
+.++++||| |..++ +++++.+. +++-|...+ +... +.+.+- +-.| +..+.+++|+.. +.|++++++|.
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~d-r~~~-~~~~l~--~~~~~~~~~~~~~~e~v~---~aDiVi~atp~ 206 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWN-RTKE-NAEKFA--DTVQGEVRVCSSVQEAVA---GADVIITVTLA 206 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEEC-SSHH-HHHHHH--HHSSSCCEECSSHHHHHT---TCSEEEECCCC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEc-CCHH-HHHHHH--HHhhCCeEEeCCHHHHHh---cCCEEEEEeCC
Confidence 456788886 33344 77777764 774444443 3221 111110 1113 567889998775 47999999986
Q ss_pred hhhHHHHHH-HhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEc
Q 007482 83 RSAAASSMA-ALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 129 (602)
Q Consensus 83 ~~~~~~~~e-~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiG 129 (602)
.. .+++ ++-+.|. .++.++ .+... .+++.+.+++.|..++.
T Consensus 207 ~~---~v~~~~~l~~g~-~vi~~g-~~~p~-~~el~~~~~~~g~~~vD 248 (312)
T 2i99_A 207 TE---PILFGEWVKPGA-HINAVG-ASRPD-WRELDDELMKEAVLYVD 248 (312)
T ss_dssp SS---CCBCGGGSCTTC-EEEECC-CCSTT-CCSBCHHHHHHSEEEES
T ss_pred CC---cccCHHHcCCCc-EEEeCC-CCCCC-ceeccHHHHhcCEEEEC
Confidence 42 3332 2333443 333333 33322 25555566666766665
No 331
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=40.65 E-value=83 Score=31.01 Aligned_cols=94 Identities=11% Similarity=-0.031 Sum_probs=47.3
Q ss_pred EEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCc--ccccc--C-ce--eecccccCCHHHHhhcCCCccEEEEec
Q 007482 12 QALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGF--QKLFF--G-QE--EIAIPVHSTVEAACAAHPMADVFINFS 80 (602)
Q Consensus 12 ~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~--~~~~~--g-~~--v~G~~~y~sv~~i~~~~p~vDlavi~v 80 (602)
+++|.|.+|. +++.|++.|++++.-......... .+.+. + -+ ...+.-..++.++.... ++|.+|-+.
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vih~A 81 (347)
T 1orr_A 3 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-MPDSCFHLA 81 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-CCSEEEECC
T ss_pred EEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-CCCEEEECC
Confidence 3455555444 778888899987533211111100 00000 0 00 11233334455555432 279988766
Q ss_pred CChh-----------------hHHHHHHHhhCCCCc-EEEEecC
Q 007482 81 SFRS-----------------AAASSMAALKQPTIR-VVAIIAE 106 (602)
Q Consensus 81 p~~~-----------------~~~~~~e~~~~~gv~-~~viis~ 106 (602)
.... ....++++|.+.+++ .+|.+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS 125 (347)
T 1orr_A 82 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSST 125 (347)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred cccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecc
Confidence 4321 013467888877886 6777765
No 332
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=40.47 E-value=83 Score=30.29 Aligned_cols=90 Identities=6% Similarity=-0.007 Sum_probs=47.3
Q ss_pred CCcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCC-CccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 9 KTTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAE-GFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 9 p~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~-~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
.+++.|.| . |. +++.|++.|++++.-...+.+- ...+.+ ...+.-..++.++... ++|.+|-+....
T Consensus 3 ~~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~Dl~d~~~~~~~~~~--~~d~vih~a~~~ 74 (286)
T 3gpi_A 3 LSKILIAG-C-GDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTL----IADVTRPDTLASIVHL--RPEILVYCVAAS 74 (286)
T ss_dssp CCCEEEEC-C-SHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEE----ECCTTCGGGCTTGGGG--CCSEEEECHHHH
T ss_pred CCcEEEEC-C-CHHHHHHHHHHHHCCCEEEEEeCCccccccCCceE----EccCCChHHHHHhhcC--CCCEEEEeCCCC
Confidence 35666664 3 44 7788888999875333212111 011111 1122233444444442 379988765321
Q ss_pred ------------hhHHHHHHHhhCCCCcEEEEecC
Q 007482 84 ------------SAAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 84 ------------~~~~~~~e~~~~~gv~~~viis~ 106 (602)
.....++++|.+.|++.+|.+|+
T Consensus 75 ~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 75 EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp HHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 11345677777777777776665
No 333
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=40.13 E-value=1.2e+02 Score=24.09 Aligned_cols=78 Identities=8% Similarity=0.084 Sum_probs=50.8
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|-+|..+-.....+...+.+.| +. +... -+..+.++++.+. ...+|++-++....++..+++.+|+..
T Consensus 3 ~ilivdd~~~~~~~l~~~l~~~~--~~-v~~~-------~~~~~a~~~~~~~-~~dlvl~D~~l~~~~g~~~~~~l~~~~ 71 (116)
T 3a10_A 3 RILVVDDEPNIRELLKEELQEEG--YE-IDTA-------ENGEEALKKFFSG-NYDLVILDIEMPGISGLEVAGEIRKKK 71 (116)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTT--CE-EEEE-------SSHHHHHHHHHHS-CCSEEEECSCCSSSCHHHHHHHHHHHC
T ss_pred EEEEEeCCHHHHHHHHHHHHHCC--CE-EEEe-------CCHHHHHHHHhcC-CCCEEEEECCCCCCCHHHHHHHHHccC
Confidence 46677777777767767776654 32 2222 2345777777654 356777766644457889999998866
Q ss_pred CCCCEEEEE
Q 007482 243 VNKPVVAWV 251 (602)
Q Consensus 243 ~~KPVv~~k 251 (602)
...|||++-
T Consensus 72 ~~~~ii~~s 80 (116)
T 3a10_A 72 KDAKIILLT 80 (116)
T ss_dssp TTCCEEEEE
T ss_pred CCCeEEEEE
Confidence 677888874
No 334
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=40.02 E-value=1.1e+02 Score=29.37 Aligned_cols=33 Identities=6% Similarity=-0.005 Sum_probs=21.3
Q ss_pred ccEEEEecCChh---------------hHHHHHHHhhCCCCcEEEEecC
Q 007482 73 ADVFINFSSFRS---------------AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 73 vDlavi~vp~~~---------------~~~~~~e~~~~~gv~~~viis~ 106 (602)
+|.+|-+..... ....++++|.+.|+ .+|.+|+
T Consensus 69 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 116 (310)
T 1eq2_A 69 VEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS 116 (310)
T ss_dssp CCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred CcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEee
Confidence 799887654321 02457788887788 5666665
No 335
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=39.89 E-value=1.2e+02 Score=25.20 Aligned_cols=113 Identities=13% Similarity=0.109 Sum_probs=72.1
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhc
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 241 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~ 241 (602)
-+|-+|..+-.....+...+.+.|.- ++.. .+..+.++++.+. ...+|++-+ ....++.++++.+++.
T Consensus 5 ~~iLivdd~~~~~~~l~~~L~~~g~~---v~~~-------~~~~~a~~~l~~~-~~dlvi~d~-~~~~~g~~~~~~l~~~ 72 (142)
T 2qxy_A 5 PTVMVVDESRITFLAVKNALEKDGFN---VIWA-------KNEQEAFTFLRRE-KIDLVFVDV-FEGEESLNLIRRIREE 72 (142)
T ss_dssp CEEEEECSCHHHHHHHHHHHGGGTCE---EEEE-------SSHHHHHHHHTTS-CCSEEEEEC-TTTHHHHHHHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHhCCCE---EEEE-------CCHHHHHHHHhcc-CCCEEEEeC-CCCCcHHHHHHHHHHH
Confidence 36888888888888887777765542 2222 2356788888765 456777665 4445677889988886
Q ss_pred CCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHh
Q 007482 242 KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFEK 310 (602)
Q Consensus 242 ~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~~ 310 (602)
....|||++-.- ... ..... ..++|+. ..-+.++|...++.+..+
T Consensus 73 ~~~~pii~ls~~-~~~----------------------~~~~~-~~~~g~~~~l~kP~~~~~l~~~i~~~~~~ 121 (142)
T 2qxy_A 73 FPDTKVAVLSAY-VDK----------------------DLIIN-SVKAGAVDYILKPFRLDYLLERVKKIISS 121 (142)
T ss_dssp CTTCEEEEEESC-CCH----------------------HHHHH-HHHHTCSCEEESSCCHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECC-CCH----------------------HHHHH-HHHCCcceeEeCCCCHHHHHHHHHHHHhh
Confidence 667898888321 111 12222 2345542 346888998888877654
No 336
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=39.88 E-value=19 Score=33.49 Aligned_cols=91 Identities=15% Similarity=0.046 Sum_probs=49.8
Q ss_pred CcEEEEeeCC--cH-HHHHHHhcCCeEEEEEeCCCCCCccccc---cCcee--ecccccCCHHHHhhcCCCccEEEEecC
Q 007482 10 TTQALFYNYK--QL-PIQRMLDFDFLCVAGIINPGAEGFQKLF---FGQEE--IAIPVHSTVEAACAAHPMADVFINFSS 81 (602)
Q Consensus 10 ~s~avv~g~~--~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~---~g~~v--~G~~~y~sv~~i~~~~p~vDlavi~vp 81 (602)
++++|+|+.+ |+ +.+.+.+.|++++ .++ .... +.+.+ .|..+ ..+. +.++.++.+ +.|++++++|
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~-~~~-r~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~D~Vi~~~~ 73 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIV-VGS-RREE-KAEAKAAEYRRIAGDASIT-GMKNEDAAE---ACDIAVLTIP 73 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEE-EEE-SSHH-HHHHHHHHHHHHHSSCCEE-EEEHHHHHH---HCSEEEECSC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEE-EEe-CCHH-HHHHHHHHhccccccCCCC-hhhHHHHHh---cCCEEEEeCC
Confidence 3577785232 33 7788888888753 343 2111 11111 01000 0133 457777655 3799999999
Q ss_pred ChhhHHHHHHHhhC--CCCcEEEEecCCCC
Q 007482 82 FRSAAASSMAALKQ--PTIRVVAIIAEGVP 109 (602)
Q Consensus 82 ~~~~~~~~~e~~~~--~gv~~~viis~Gf~ 109 (602)
+.. ...+++++.. ++ +.++-+++|+.
T Consensus 74 ~~~-~~~~~~~l~~~~~~-~~vi~~~~g~~ 101 (212)
T 1jay_A 74 WEH-AIDTARDLKNILRE-KIVVSPLVPVS 101 (212)
T ss_dssp HHH-HHHHHHHTHHHHTT-SEEEECCCCEE
T ss_pred hhh-HHHHHHHHHHHcCC-CEEEEcCCCcC
Confidence 764 5677766542 22 34566677776
No 337
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=39.10 E-value=95 Score=26.34 Aligned_cols=118 Identities=8% Similarity=-0.020 Sum_probs=77.2
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHH
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 239 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r 239 (602)
.+.+|-+|...-.+...+...+.+.| ....|.. -.+..+.++.+.+. ...+|++-++....++.++++.+|
T Consensus 14 ~~~~iLivdd~~~~~~~l~~~L~~~~--~~~~v~~------~~~~~~a~~~l~~~-~~dlii~d~~l~~~~g~~~~~~l~ 84 (152)
T 3eul_A 14 EKVRVVVGDDHPLFREGVVRALSLSG--SVNVVGE------ADDGAAALELIKAH-LPDVALLDYRMPGMDGAQVAAAVR 84 (152)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHS--SEEEEEE------ESSHHHHHHHHHHH-CCSEEEEETTCSSSCHHHHHHHHH
T ss_pred ceEEEEEEcCCHHHHHHHHHHHhhCC--CeEEEEE------eCCHHHHHHHHHhc-CCCEEEEeCCCCCCCHHHHHHHHH
Confidence 56789999999998888888877654 2333321 12345777777654 356777777655578899999999
Q ss_pred hcCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHh
Q 007482 240 QGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFEK 310 (602)
Q Consensus 240 ~~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~~ 310 (602)
+.....|||++- +.... ..... +.++|+. ...+.++|...++.++.+
T Consensus 85 ~~~~~~~ii~~s-~~~~~----------------------~~~~~-~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~ 135 (152)
T 3eul_A 85 SYELPTRVLLIS-AHDEP----------------------AIVYQ-ALQQGAAGFLLKDSTRTEIVKAVLDCAKG 135 (152)
T ss_dssp HTTCSCEEEEEE-SCCCH----------------------HHHHH-HHHTTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred hcCCCCeEEEEE-ccCCH----------------------HHHHH-HHHcCCCEEEecCCCHHHHHHHHHHHHcC
Confidence 876677888873 22211 22222 3356653 456788988888777653
No 338
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=38.79 E-value=1.1e+02 Score=27.94 Aligned_cols=83 Identities=12% Similarity=0.095 Sum_probs=58.8
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcC------------CCccEEEEEEecC
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNI------------PQVKMMVVLGELG 227 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~D------------p~t~~I~ly~E~g 227 (602)
.+-+|-+|--.-.+...+...+.+. |+..+.... +..+.++++.+. ....+|++-+...
T Consensus 60 ~~~~ILiVdDd~~~~~~l~~~L~~~--g~~~v~~a~-------~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp 130 (206)
T 3mm4_A 60 RGKRVLVVDDNFISRKVATGKLKKM--GVSEVEQCD-------SGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMP 130 (206)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHHT--TCSEEEEES-------SHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCS
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHc--CCCeeeeeC-------CHHHHHHHHHhhcccccccccccCCCCCEEEEcCCCC
Confidence 3457999999988888887777766 443444433 345778888763 3456788777755
Q ss_pred CCcHHHHHHHHHhc----CCCCCEEEEE
Q 007482 228 GRDEYSLVEALKQG----KVNKPVVAWV 251 (602)
Q Consensus 228 ~~~~~~f~~~~r~~----~~~KPVv~~k 251 (602)
..++.++++.+|+. ....|||++-
T Consensus 131 ~~~G~el~~~lr~~~~~~~~~~piI~ls 158 (206)
T 3mm4_A 131 EMDGYEATREIRKVEKSYGVRTPIIAVS 158 (206)
T ss_dssp SSCHHHHHHHHHHHHHTTTCCCCEEEEE
T ss_pred CCCHHHHHHHHHhhhhhcCCCCcEEEEE
Confidence 67899999999874 3567888884
No 339
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=38.73 E-value=1.6e+02 Score=24.27 Aligned_cols=83 Identities=5% Similarity=0.014 Sum_probs=57.4
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhc-----CCCccEEEEEEecCCCcHHHHH
Q 007482 161 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNN-----IPQVKMMVVLGELGGRDEYSLV 235 (602)
Q Consensus 161 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~-----Dp~t~~I~ly~E~g~~~~~~f~ 235 (602)
+-+|-+|..+-.....+...+.+.|.... +.. --+..+.++++.+ +....+|++-++....++.+++
T Consensus 7 ~~~ILivdd~~~~~~~l~~~L~~~g~~~~-v~~-------~~~~~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~ 78 (143)
T 2qvg_A 7 KVDILYLEDDEVDIQSVERVFHKISSLIK-IEI-------AKSGNQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFL 78 (143)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHHCTTCC-EEE-------ESSHHHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHhCCCce-EEE-------ECCHHHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHH
Confidence 45789999998888888888877665311 111 2345688888876 3456777777664446788999
Q ss_pred HHHHhcC--CCCCEEEEE
Q 007482 236 EALKQGK--VNKPVVAWV 251 (602)
Q Consensus 236 ~~~r~~~--~~KPVv~~k 251 (602)
+.+|+.. ...|||++-
T Consensus 79 ~~l~~~~~~~~~~ii~ls 96 (143)
T 2qvg_A 79 KELRDDSSFTDIEVFVLT 96 (143)
T ss_dssp HHHTTSGGGTTCEEEEEE
T ss_pred HHHHcCccccCCcEEEEe
Confidence 9998754 567888873
No 340
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=38.23 E-value=68 Score=31.16 Aligned_cols=92 Identities=13% Similarity=0.017 Sum_probs=45.3
Q ss_pred CcEEEEeeCCcH----HHHHHHhcC-CeEEEEEeCCCCCCccccc--cCcee--ecccccCCHHHHhhcCCCccEEEEec
Q 007482 10 TTQALFYNYKQL----PIQRMLDFD-FLCVAGIINPGAEGFQKLF--FGQEE--IAIPVHSTVEAACAAHPMADVFINFS 80 (602)
Q Consensus 10 ~s~avv~g~~~~----~~~~~~~~g-~~~V~gv~~p~~~~~~~~~--~g~~v--~G~~~y~sv~~i~~~~p~vDlavi~v 80 (602)
+++.|. |.+|. +++.|++.| ++++.....|.+. ..+.+ .|-++ ..+.-..++.++.. .+|.+|.+.
T Consensus 6 ~~ilVt-GatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~-~~~~l~~~~~~~~~~D~~d~~~l~~~~~---~~d~vi~~a 80 (299)
T 2wm3_A 6 KLVVVF-GGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK-AAKELRLQGAEVVQGDQDDQVIMELALN---GAYATFIVT 80 (299)
T ss_dssp CEEEEE-TTTSHHHHHHHHHHHHHCSSEEEEEESCTTSH-HHHHHHHTTCEEEECCTTCHHHHHHHHT---TCSEEEECC
T ss_pred CEEEEE-CCCchHHHHHHHHHHhcCCceEEEEEcCCCCH-HHHHHHHCCCEEEEecCCCHHHHHHHHh---cCCEEEEeC
Confidence 445555 55444 777888877 8865333223221 00000 01111 11222334444443 378877765
Q ss_pred CCh---------hhHHHHHHHhhCCCCcEEEEecC
Q 007482 81 SFR---------SAAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 81 p~~---------~~~~~~~e~~~~~gv~~~viis~ 106 (602)
+.. .....++++|.+.|++.+|..|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~ 115 (299)
T 2wm3_A 81 NYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGL 115 (299)
T ss_dssp CHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred CCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 421 01335677777778887777554
No 341
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=38.02 E-value=62 Score=26.85 Aligned_cols=116 Identities=12% Similarity=0.090 Sum_probs=74.6
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecC-CCcHHHHHHHHH
Q 007482 161 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELG-GRDEYSLVEALK 239 (602)
Q Consensus 161 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g-~~~~~~f~~~~r 239 (602)
.-+|-+|...-.....+...+.+.|+-+... .. +..+.++++.+.+ ..+|++-++.. ..++.++++.++
T Consensus 9 ~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~--~~-------~~~~a~~~~~~~~-~dlii~d~~~~~~~~g~~~~~~l~ 78 (140)
T 3cg0_A 9 LPGVLIVEDGRLAAATLRIQLESLGYDVLGV--FD-------NGEEAVRCAPDLR-PDIALVDIMLCGALDGVETAARLA 78 (140)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHHTCEEEEE--ES-------SHHHHHHHHHHHC-CSEEEEESSCCSSSCHHHHHHHHH
T ss_pred CceEEEEECCHHHHHHHHHHHHHCCCeeEEE--EC-------CHHHHHHHHHhCC-CCEEEEecCCCCCCCHHHHHHHHH
Confidence 4479999999888888888887655432211 22 3446777776643 56777777642 467889999998
Q ss_pred hcCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHhH
Q 007482 240 QGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEKL 311 (602)
Q Consensus 240 ~~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~~ 311 (602)
+. ...|||++-.- ... ..... ..++|+ ...-+.++|...++.+....
T Consensus 79 ~~-~~~~ii~ls~~-~~~----------------------~~~~~-~~~~g~~~~l~kp~~~~~l~~~i~~~~~~~ 129 (140)
T 3cg0_A 79 AG-CNLPIIFITSS-QDV----------------------ETFQR-AKRVNPFGYLAKPVAADTLHRSIEMAIHKK 129 (140)
T ss_dssp HH-SCCCEEEEECC-CCH----------------------HHHHH-HHTTCCSEEEEESCCHHHHHHHHHHHHHHH
T ss_pred hC-CCCCEEEEecC-CCH----------------------HHHHH-HHhcCCCEEEeCCCCHHHHHHHHHHHHhcc
Confidence 86 67899988321 111 22222 235664 33568899998888776543
No 342
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=37.94 E-value=1e+02 Score=25.74 Aligned_cols=118 Identities=13% Similarity=-0.036 Sum_probs=71.8
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhc
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 241 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~ 241 (602)
-+|-+|.-.-.....+...+.+.+ |+..+-.. -+..+.++.+.+.+ ..+|++-++....++.++++.+++.
T Consensus 10 ~~iLivdd~~~~~~~l~~~L~~~~-~~~~v~~~-------~~~~~al~~l~~~~-~dlvi~d~~l~~~~g~~~~~~l~~~ 80 (143)
T 2qv0_A 10 MKVIIVEDEFLAQQELSWLINTHS-QMEIVGSF-------DDGLDVLKFLQHNK-VDAIFLDINIPSLDGVLLAQNISQF 80 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHS-CCEEEEEE-------SCHHHHHHHHHHCC-CSEEEECSSCSSSCHHHHHHHHTTS
T ss_pred eEEEEEcCCHHHHHHHHHHHHhCC-CceEEEEe-------CCHHHHHHHHHhCC-CCEEEEecCCCCCCHHHHHHHHHcc
Confidence 468888888888877777776542 33322222 23457777777654 5677776664445788999999875
Q ss_pred CCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHhHhhc
Q 007482 242 KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFEKLVEE 314 (602)
Q Consensus 242 ~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~~~~~~ 314 (602)
....|||++ ++..+ ... .+ .++|+. ..-+.++|...++.+.......
T Consensus 81 ~~~~~ii~~-s~~~~-----------------------~~~-~~-~~~g~~~~l~KP~~~~~l~~~i~~~~~~~~~~ 131 (143)
T 2qv0_A 81 AHKPFIVFI-TAWKE-----------------------HAV-EA-FELEAFDYILKPYQESRIINMLQKLTTAWEQQ 131 (143)
T ss_dssp TTCCEEEEE-ESCCT-----------------------THH-HH-HHTTCSEEEESSCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCceEEEE-eCCHH-----------------------HHH-HH-HhCCcceEEeCCCCHHHHHHHHHHHHHHHHhc
Confidence 444456655 33211 111 22 245543 3457889998888877665444
No 343
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=37.93 E-value=58 Score=33.03 Aligned_cols=95 Identities=9% Similarity=-0.089 Sum_probs=48.2
Q ss_pred CCcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCC--CccccccCcee--ec-ccccCCHHHHhhcCCCccEEEEe
Q 007482 9 KTTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAE--GFQKLFFGQEE--IA-IPVHSTVEAACAAHPMADVFINF 79 (602)
Q Consensus 9 p~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~--~~~~~~~g~~v--~G-~~~y~sv~~i~~~~p~vDlavi~ 79 (602)
++++.|. |.+|. +++.|++.|++++.....+.+. .+.....+-++ .. +.-..++.++.. .+|.+|.+
T Consensus 5 ~~~ilVt-GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~---~~d~Vi~~ 80 (352)
T 1xgk_A 5 KKTIAVV-GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE---GAHLAFIN 80 (352)
T ss_dssp CCCEEEE-STTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT---TCSEEEEC
T ss_pred CCEEEEE-CCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHh---cCCEEEEc
Confidence 4566666 44443 7778888899875333212210 00000001111 11 222233444443 37888765
Q ss_pred cCCh-----hhHHHHHHHhhCCC-CcEEEEecCC
Q 007482 80 SSFR-----SAAASSMAALKQPT-IRVVAIIAEG 107 (602)
Q Consensus 80 vp~~-----~~~~~~~e~~~~~g-v~~~viis~G 107 (602)
.... .....++++|.+.| ++.+|.+|+.
T Consensus 81 a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 81 TTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp CCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred CCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence 5432 11245777787778 8888888774
No 344
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=37.71 E-value=47 Score=38.03 Aligned_cols=57 Identities=14% Similarity=0.126 Sum_probs=38.3
Q ss_pred CccEEEEecCC---hhhHHHHHHHhhCCCCcEEEEecCC-CCHHHHHHHHHHHHhCCC-eeEcCCc
Q 007482 72 MADVFINFSSF---RSAAASSMAALKQPTIRVVAIIAEG-VPEADTKQLIAYARSNNK-VVIGPAT 132 (602)
Q Consensus 72 ~vDlavi~vp~---~~~~~~~~e~~~~~gv~~~viis~G-f~E~~~~~l~~~a~~~g~-riiGPNc 132 (602)
++|++.++.-. ....+.+++++.++|.+.+.|+.+| .+..+.+. +++.|+ .+.+|.+
T Consensus 655 ~adiVglSsl~~~~~~~~~~vi~~Lr~~G~~dv~VivGG~~P~~d~~~----l~~~GaD~~f~pgt 716 (762)
T 2xij_A 655 DVHAVGVSTLAAGHKTLVPELIKELNSLGRPDILVMCGGVIPPQDYEF----LFEVGVSNVFGPGT 716 (762)
T ss_dssp TCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEESCCGGGHHH----HHHHTCCEEECTTC
T ss_pred CCCEEEEeeecHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCcccHHH----HHhCCCCEEeCCCC
Confidence 47998888633 2234678888888898777788888 55544433 356677 4777654
No 345
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=37.70 E-value=74 Score=29.71 Aligned_cols=75 Identities=11% Similarity=0.018 Sum_probs=43.9
Q ss_pred CCCCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+..++++||| |..|. ..+.|.+.|++++ .++ + . .+ . .. +.|++++++|+.
T Consensus 17 ~~~~~I~iiG~G~mG~~la~~l~~~g~~V~-~~~-~--~--------~~-----------~-~~---~aD~vi~av~~~- 68 (209)
T 2raf_A 17 FQGMEITIFGKGNMGQAIGHNFEIAGHEVT-YYG-S--K--------DQ-----------A-TT---LGEIVIMAVPYP- 68 (209)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC-T--T--------CC-----------C-SS---CCSEEEECSCHH-
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEc-C--C--------HH-----------H-hc---cCCEEEEcCCcH-
Confidence 4567899996 33344 7778888888742 332 2 1 11 2 22 479999999965
Q ss_pred hHHHHHHHhhC-CCCcEEEEecCCCC
Q 007482 85 AAASSMAALKQ-PTIRVVAIIAEGVP 109 (602)
Q Consensus 85 ~~~~~~e~~~~-~gv~~~viis~Gf~ 109 (602)
.+.++++++.. ..=+.++-+++|++
T Consensus 69 ~~~~v~~~l~~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 69 ALAALAKQYATQLKGKIVVDITNPLN 94 (209)
T ss_dssp HHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 46777776642 12233444577886
No 346
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=37.62 E-value=1.2e+02 Score=29.72 Aligned_cols=91 Identities=7% Similarity=0.077 Sum_probs=43.1
Q ss_pred EEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccccC-ce--eecccccCCHHHHhhcCCCccEEEEecCChh-
Q 007482 13 ALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFFG-QE--EIAIPVHSTVEAACAAHPMADVFINFSSFRS- 84 (602)
Q Consensus 13 avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g-~~--v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~- 84 (602)
++|.|.+|. +++.|++.|++++. +.-..... .+.+.+ -+ ...+.-..++.++..+. ++|.+|-+.....
T Consensus 4 ilVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vih~a~~~~~ 80 (330)
T 2c20_A 4 ILICGGAGYIGSHAVKKLVDEGLSVVV-VDNLQTGH-EDAITEGAKFYNGDLRDKAFLRDVFTQE-NIEAVMHFAADSLV 80 (330)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEE-EECCSSCC-GGGSCTTSEEEECCTTCHHHHHHHHHHS-CEEEEEECCCCCCH
T ss_pred EEEECCCcHHHHHHHHHHHhCCCEEEE-EeCCCcCc-hhhcCCCcEEEECCCCCHHHHHHHHhhc-CCCEEEECCcccCc
Confidence 444454443 77888889998653 33121110 011110 00 01222233444444422 3677776543211
Q ss_pred ----------------hHHHHHHHhhCCCCcEEEEecC
Q 007482 85 ----------------AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 85 ----------------~~~~~~e~~~~~gv~~~viis~ 106 (602)
....++++|.+.+++.+|.+|+
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 81 GVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 1124566666667777776665
No 347
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=37.47 E-value=1.6e+02 Score=23.76 Aligned_cols=79 Identities=11% Similarity=0.019 Sum_probs=53.4
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhc
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 241 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~ 241 (602)
-+|-+|.-+-.....+...+.+.|. . +.... +..+.++++.+. ...+|++=++....++..+++.+|+.
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~~~--~-v~~~~-------~~~~~~~~~~~~-~~dlvi~D~~l~~~~g~~~~~~l~~~ 72 (126)
T 1dbw_A 4 YTVHIVDDEEPVRKSLAFMLTMNGF--A-VKMHQ-------SAEAFLAFAPDV-RNGVLVTDLRMPDMSGVELLRNLGDL 72 (126)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHTTC--E-EEEES-------CHHHHHHHGGGC-CSEEEEEECCSTTSCHHHHHHHHHHT
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCc--E-EEEeC-------CHHHHHHHHhcC-CCCEEEEECCCCCCCHHHHHHHHHhc
Confidence 3678888887777777777766543 2 22222 345778887664 34677776664445788999999886
Q ss_pred CCCCCEEEEE
Q 007482 242 KVNKPVVAWV 251 (602)
Q Consensus 242 ~~~KPVv~~k 251 (602)
....|||++-
T Consensus 73 ~~~~~ii~~s 82 (126)
T 1dbw_A 73 KINIPSIVIT 82 (126)
T ss_dssp TCCCCEEEEE
T ss_pred CCCCCEEEEE
Confidence 6678998873
No 348
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=37.29 E-value=44 Score=34.58 Aligned_cols=35 Identities=6% Similarity=0.145 Sum_probs=25.7
Q ss_pred CccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCCCC
Q 007482 72 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 109 (602)
Q Consensus 72 ~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~ 109 (602)
++|+++.++|... .....+.+ ++|++ +|-.|+-|.
T Consensus 82 ~vDvVf~atp~~~-s~~~a~~~-~aG~~-VId~sa~~R 116 (359)
T 1xyg_A 82 TVDAVFCCLPHGT-TQEIIKEL-PTALK-IVDLSADFR 116 (359)
T ss_dssp GCSEEEECCCTTT-HHHHHHTS-CTTCE-EEECSSTTT
T ss_pred CCCEEEEcCCchh-HHHHHHHH-hCCCE-EEECCcccc
Confidence 4899999999864 45566667 78986 666676674
No 349
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=37.26 E-value=75 Score=27.14 Aligned_cols=59 Identities=12% Similarity=0.023 Sum_probs=41.9
Q ss_pred CccEEEEecCC------hh-hHHHHHHHhhC--CCCcEEEEecCCCC-HHHHHHHHHHHHhCCCeeEcC
Q 007482 72 MADVFINFSSF------RS-AAASSMAALKQ--PTIRVVAIIAEGVP-EADTKQLIAYARSNNKVVIGP 130 (602)
Q Consensus 72 ~vDlavi~vp~------~~-~~~~~~e~~~~--~gv~~~viis~Gf~-E~~~~~l~~~a~~~g~riiGP 130 (602)
+.|++|+..|- +. .....++.+.. +|.+.+++.|.|.. ....+++.+..++.|.+++|+
T Consensus 45 ~~d~iiig~pty~~g~~p~~~~~~fl~~l~~~l~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~~~v~~ 113 (138)
T 5nul_A 45 NEDILILGCSAMTDEVLEESEFEPFIEEISTKISGKKVALFGSYGWGDGKWMRDFEERMNGYGCVVVET 113 (138)
T ss_dssp TCSEEEEEECCBTTTBCCTTTHHHHHHHHGGGCTTCEEEEEEEESSSCSHHHHHHHHHHHHTTCEECSC
T ss_pred hCCEEEEEcCccCCCCCChHHHHHHHHHHHhhcCCCEEEEEEecCCCCChHHHHHHHHHHHCCCEEECC
Confidence 36999998873 11 25567777653 56676666666654 445788888899999999987
No 350
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=37.26 E-value=64 Score=27.51 Aligned_cols=81 Identities=10% Similarity=0.078 Sum_probs=54.7
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhc
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 241 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~ 241 (602)
-+|-+|.-.......+...+.+ -.|+..+... .+..+.++++.+.+ ..+|++-++....++.++++.+++.
T Consensus 6 ~~ILivdd~~~~~~~l~~~L~~-~~~~~v~~~~-------~~~~~a~~~l~~~~-~dlii~D~~l~~~~g~~~~~~l~~~ 76 (153)
T 3cz5_A 6 ARIMLVDDHPIVREGYRRLIER-RPGYAVVAEA-------ADAGEAYRLYRETT-PDIVVMDLTLPGPGGIEATRHIRQW 76 (153)
T ss_dssp EEEEEECSCHHHHHHHHHHHTT-STTEEEEEEE-------SSHHHHHHHHHTTC-CSEEEECSCCSSSCHHHHHHHHHHH
T ss_pred cEEEEECCcHHHHHHHHHHHhh-CCCcEEEEEe-------CCHHHHHHHHhcCC-CCEEEEecCCCCCCHHHHHHHHHHh
Confidence 4688888888777777766654 1344432122 23457778777654 6777777664446788999999987
Q ss_pred CCCCCEEEEE
Q 007482 242 KVNKPVVAWV 251 (602)
Q Consensus 242 ~~~KPVv~~k 251 (602)
....|||++-
T Consensus 77 ~~~~~ii~ls 86 (153)
T 3cz5_A 77 DGAARILIFT 86 (153)
T ss_dssp CTTCCEEEEE
T ss_pred CCCCeEEEEE
Confidence 6778998873
No 351
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=37.24 E-value=66 Score=32.48 Aligned_cols=102 Identities=10% Similarity=0.049 Sum_probs=66.3
Q ss_pred HHHHHHhcCCeEEEEEeCCCCCCccccccCceeeccccc-----CCHHHHhhc---CCCccEEEEecCCh------hhHH
Q 007482 22 PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVH-----STVEAACAA---HPMADVFINFSSFR------SAAA 87 (602)
Q Consensus 22 ~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y-----~sv~~i~~~---~p~vDlavi~vp~~------~~~~ 87 (602)
+.+.|++.||. +....-++.|+| .|-|+| ++++|++.. .+ =++|++=|.. ...+
T Consensus 149 iA~~Lv~~G~~-------~~~~~aF~~~l~---~g~~~yV~~~~~~~~eaI~~I~~aG--GvaVLAHP~r~~~~r~~~~~ 216 (301)
T 3o0f_A 149 IADALVAAGVY-------ETRSDAFADAVS---AKSKYYIPTPSPSTHEVIAAVKGAG--GVVVAAHAGDPQRNRRLLSD 216 (301)
T ss_dssp HHHHHHHTTSC-------SSHHHHHTTTTS---TTSTTCCCCCCCBHHHHHHHHHHTT--CEEEECSTTCTTTCSSCCCH
T ss_pred HHHHHHHcCCC-------CCHHHHHHHHHc---CCCccccCccCCCHHHHHHHHHHCC--CEEEecChhhhccccccCcH
Confidence 67788887772 211111122333 244554 678887642 22 3667666621 1135
Q ss_pred HHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe-eEcCCcccc
Q 007482 88 SSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV-VIGPATVGG 135 (602)
Q Consensus 88 ~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r-iiGPNc~G~ 135 (602)
..+++..+.|+.++=++.++-.+.+.+++.++|+++|+. ..|=++=|-
T Consensus 217 ~~l~~l~~~GldgIEv~~~~~~~~~~~~~~~lA~~~gL~~tgGSD~Hg~ 265 (301)
T 3o0f_A 217 EQLDAMIADGLDGLEVWHRGNPPEQRERLLTIAARHDLLVTGGSDWHGK 265 (301)
T ss_dssp HHHHHHHHHTCCEEEEESTTSCHHHHHHHHHHHHHHTCEEEECCCBCGG
T ss_pred HHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCceEEEcCCCCC
Confidence 677777778999999999888888899999999999986 456666663
No 352
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=36.90 E-value=57 Score=31.93 Aligned_cols=54 Identities=24% Similarity=0.412 Sum_probs=35.4
Q ss_pred HHHHHHHhhcCCCccEEEEEEecC-----CCcHHHHHHHH---------------Hhc--CCCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELG-----GRDEYSLVEAL---------------KQG--KVNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g-----~~~~~~f~~~~---------------r~~--~~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++-.+ | +.|-..|.+.. ++. ...||||+..-|..-.|
T Consensus 41 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~kPvIAav~G~a~Gg 116 (265)
T 3swx_A 41 LALALGEYETDTDLRAAVLYGE-GPLFTAGLDLASVAAEIQGGASLTPEGGINPWQVDGRQLSKPLLVAVHGKVLTL 116 (265)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTCSBCCBCHHHHHHHHC--CCCCCTTCCCTTCCSSCCCSSCEEEEECSEEETH
T ss_pred HHHHHHHHhhCCCceEEEEECC-CCCcccCcChHHHhhcccchhHHHHHHHHHHHHHHHHhCCCCEEEEEcCeeehH
Confidence 4467777788888888888887 5 23434443321 222 36899999988866543
No 353
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=36.83 E-value=97 Score=30.92 Aligned_cols=112 Identities=12% Similarity=0.049 Sum_probs=61.8
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCC------CC----CCCHHHHHHHhh----cCCCccEEEEEEecCC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDV------FP----GSTLSDHILRFN----NIPQVKMMVVLGELGG 228 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~------~~----dv~~~d~l~~l~----~Dp~t~~I~ly~E~g~ 228 (602)
+||+|.-+|.++...+..+.+.+.-+..+++.-.+. +. -.++.|+++++. +|++..+|.+... .-
T Consensus 5 rvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP-~~ 83 (312)
T 3o9z_A 5 RFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASP-NH 83 (312)
T ss_dssp EEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSC-GG
T ss_pred EEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCC-ch
Confidence 466666666565555555555444333333321110 00 235677775543 6899999887766 33
Q ss_pred CcHHHHHHHHHhcCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCcccCCH
Q 007482 229 RDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSY 297 (602)
Q Consensus 229 ~~~~~f~~~~r~~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~ 297 (602)
.+.+-..++++ .+|+|++=|+=.... +.+....++.++.|+...-.+
T Consensus 84 ~H~~~~~~al~---aGkhVl~EKPla~~~-------------------~ea~~l~~~a~~~g~~~~v~~ 130 (312)
T 3o9z_A 84 LHYPQIRMALR---LGANALSEKPLVLWP-------------------EEIARLKELEARTGRRVYTVL 130 (312)
T ss_dssp GHHHHHHHHHH---TTCEEEECSSSCSCH-------------------HHHHHHHHHHHHHCCCEEECC
T ss_pred hhHHHHHHHHH---CCCeEEEECCCCCCH-------------------HHHHHHHHHHHHcCCEEEEEe
Confidence 34333344444 589999877643322 122455567788888654333
No 354
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=36.57 E-value=52 Score=27.52 Aligned_cols=116 Identities=11% Similarity=0.081 Sum_probs=72.9
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCC--CcHHHHHHHH
Q 007482 161 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGG--RDEYSLVEAL 238 (602)
Q Consensus 161 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~--~~~~~f~~~~ 238 (602)
.-+|-+|.........+...+.+.|. . ++... +..+.++.+.+. ...+|++-+.... .++-++++.+
T Consensus 6 ~~~ilivdd~~~~~~~l~~~L~~~g~--~-v~~~~-------~~~~a~~~l~~~-~~dlvi~D~~l~~~~~~g~~~~~~l 74 (136)
T 3kto_A 6 HPIIYLVDHQKDARAALSKLLSPLDV--T-IQCFA-------SAESFMRQQISD-DAIGMIIEAHLEDKKDSGIELLETL 74 (136)
T ss_dssp -CEEEEECSCHHHHHHHHHHHTTSSS--E-EEEES-------SHHHHTTSCCCT-TEEEEEEETTGGGBTTHHHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCc--E-EEEeC-------CHHHHHHHHhcc-CCCEEEEeCcCCCCCccHHHHHHHH
Confidence 34788999998888888887776543 2 22222 344666666543 3566666555444 5678999999
Q ss_pred HhcCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHhH
Q 007482 239 KQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFEKL 311 (602)
Q Consensus 239 r~~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~~~ 311 (602)
|+.....|||++-.- .+. .....+ .++|+. ..-+.++|...++.+....
T Consensus 75 ~~~~~~~~ii~~s~~-~~~----------------------~~~~~~-~~~ga~~~l~KP~~~~~l~~~i~~~~~~~ 127 (136)
T 3kto_A 75 VKRGFHLPTIVMASS-SDI----------------------PTAVRA-MRASAADFIEKPFIEHVLVHDVQQIINGA 127 (136)
T ss_dssp HHTTCCCCEEEEESS-CCH----------------------HHHHHH-HHTTCSEEEESSBCHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCEEEEEcC-CCH----------------------HHHHHH-HHcChHHheeCCCCHHHHHHHHHHHHhcc
Confidence 987677898887321 111 122222 356653 3568899999888777654
No 355
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=36.53 E-value=72 Score=32.15 Aligned_cols=96 Identities=14% Similarity=0.125 Sum_probs=55.0
Q ss_pred CcEEEEeeCCcH----HHHHHHhcCC-eEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCCh-
Q 007482 10 TTQALFYNYKQL----PIQRMLDFDF-LCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR- 83 (602)
Q Consensus 10 ~s~avv~g~~~~----~~~~~~~~g~-~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~- 83 (602)
|++.|. |.+|. +++.|++.|+ +++ ..+ .. .-..++.++.. ++|.+|-+....
T Consensus 1 M~VlVt-GatG~iG~~l~~~L~~~g~~~v~-~~d---~~--------------~d~~~l~~~~~---~~d~Vih~a~~~~ 58 (369)
T 3st7_A 1 MNIVIT-GAKGFVGKNLKADLTSTTDHHIF-EVH---RQ--------------TKEEELESALL---KADFIVHLAGVNR 58 (369)
T ss_dssp CEEEEE-TTTSHHHHHHHHHHHHHCCCEEE-ECC---TT--------------CCHHHHHHHHH---HCSEEEECCCSBC
T ss_pred CEEEEE-CCCCHHHHHHHHHHHhCCCCEEE-EEC---CC--------------CCHHHHHHHhc---cCCEEEECCcCCC
Confidence 345555 44433 7888888888 643 222 10 11234555554 378888665321
Q ss_pred ------------hhHHHHHHHhhCCCCc-EEEEecCCCC-------HH---HHHHHHHHHHhCCCee
Q 007482 84 ------------SAAASSMAALKQPTIR-VVAIIAEGVP-------EA---DTKQLIAYARSNNKVV 127 (602)
Q Consensus 84 ------------~~~~~~~e~~~~~gv~-~~viis~Gf~-------E~---~~~~l~~~a~~~g~ri 127 (602)
.....++++|.+.|++ .+|.+|+... .. .++.+.+++++.|+++
T Consensus 59 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~ 125 (369)
T 3st7_A 59 PEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDNPYGESKLQGEQLLREYAEEYGNTV 125 (369)
T ss_dssp TTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGSCSHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcCCCCchHHHHHHHHHHHHHHHHhCCCE
Confidence 1135689999999998 6777765321 11 3455666677777653
No 356
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=36.52 E-value=6.4 Score=38.66 Aligned_cols=104 Identities=13% Similarity=0.006 Sum_probs=53.5
Q ss_pred cEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecCChhhH--
Q 007482 11 TQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAA-- 86 (602)
Q Consensus 11 s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~-- 86 (602)
+++||| |..++ +.+.|.+.|+++ ...+ +... +.+.+. +..|.. |.++.++ + +.|++|+++|.....
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v-~v~~-r~~~-~~~~l~--~~~~~~-~~~~~~~-~---~~Divi~~tp~~~~~~~ 187 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEV-WVWN-RTPQ-RALALA--EEFGLR-AVPLEKA-R---EARLLVNATRVGLEDPS 187 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCE-EEEC-SSHH-HHHHHH--HHHTCE-ECCGGGG-G---GCSEEEECSSTTTTCTT
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEE-EEEE-CCHH-HHHHHH--HHhccc-hhhHhhc-c---CCCEEEEccCCCCCCCC
Confidence 677775 22233 777888888753 3443 3211 101110 011223 5677776 4 479999999986311
Q ss_pred HHHH-HHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE
Q 007482 87 ASSM-AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 128 (602)
Q Consensus 87 ~~~~-e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii 128 (602)
...+ ..+-+.|. .++=++.+ ++ .. ++.+.+++.|++++
T Consensus 188 ~~~l~~~~l~~g~-~viD~~~~-p~-~t-~l~~~a~~~g~~~v 226 (263)
T 2d5c_A 188 ASPLPAELFPEEG-AAVDLVYR-PL-WT-RFLREAKAKGLKVQ 226 (263)
T ss_dssp CCSSCGGGSCSSS-EEEESCCS-SS-SC-HHHHHHHHTTCEEE
T ss_pred CCCCCHHHcCCCC-EEEEeecC-Cc-cc-HHHHHHHHCcCEEE
Confidence 0112 12222332 22222333 22 12 58888899999877
No 357
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=36.44 E-value=52 Score=32.84 Aligned_cols=52 Identities=12% Similarity=0.165 Sum_probs=33.7
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCC------cH-----------------------HHHHHHHHhcCCCCCEEEEEeCc
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGGR------DE-----------------------YSLVEALKQGKVNKPVVAWVSGT 254 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~~------~~-----------------------~~f~~~~r~~~~~KPVv~~k~Gr 254 (602)
+.+.++.+.+||++|+|++-.+ |-+ |- .+++..+++ ..||||+..-|.
T Consensus 40 L~~al~~~~~d~~vr~vVltg~-g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~kPvIAaV~G~ 116 (287)
T 3gkb_A 40 LRTVLTTLADDSSVRVIVFSSA-DPEFFLAHVDMRIGEKMDALQELAASAPADVNVFQAVGELIRH--QPQVTIVKLAGK 116 (287)
T ss_dssp HHHHHHHHHTCTTCCEEEEEES-SSSEEECCBCTTGGGSHHHHHHHHHTSCTTCCTTHHHHHHHHH--CSSEEEEEECSE
T ss_pred HHHHHHHHHcCCCeeEEEEecC-CCCceeCCcCHHHHhhccccchhhHHHHHHHHHHHHHHHHHHh--CCCCEEEEECCe
Confidence 4567777788888888888887 521 10 122233332 689999999886
Q ss_pred CccC
Q 007482 255 CARL 258 (602)
Q Consensus 255 ~~~g 258 (602)
.-.|
T Consensus 117 a~Gg 120 (287)
T 3gkb_A 117 ARGG 120 (287)
T ss_dssp EETH
T ss_pred eehH
Confidence 6543
No 358
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=36.29 E-value=1e+02 Score=30.40 Aligned_cols=113 Identities=7% Similarity=0.078 Sum_probs=44.7
Q ss_pred CCCHHHHHHHHHHHHhCCCeeEcCCcccccccCcccccccCCcccccccccCCCCCcEEEEecC--------hhHHHHHH
Q 007482 107 GVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKS--------GGMSNELY 178 (602)
Q Consensus 107 Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQS--------G~l~~~~~ 178 (602)
+++++..+++.+.+++.|-+ ||...- .+ ..-+...||++..+ ..+...+-
T Consensus 29 ~vs~~tr~rV~~~a~~lgY~---pn~~a~------~l-------------~~~~~~~Igvi~~~~~~~~~~~~~~~~gi~ 86 (338)
T 3dbi_A 29 YVSQETKDRVFQAVEESGYR---PNLLAR------NL-------------SAKSTQTLGLVVTNTLYHGIYFSELLFHAA 86 (338)
T ss_dssp -----------------------------------------------------CCSEEEEEECTTTTSTTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCC---cCHHHH------Hh-------------hhCCCCEEEEEecCCcccChhHHHHHHHHH
Confidence 56777788888999887754 543210 11 00134556666544 23344445
Q ss_pred HHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcCCCCCEEEE
Q 007482 179 NTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAW 250 (602)
Q Consensus 179 ~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~~~KPVv~~ 250 (602)
..+.+.|.-+ .+...+.. .-...++++.+.+ .++..|++..- .. +...+.+.+++ .+.|||++
T Consensus 87 ~~a~~~g~~~--~~~~~~~~--~~~~~~~~~~l~~-~~vdgiIi~~~-~~-~~~~~~~~~~~--~~iPvV~~ 149 (338)
T 3dbi_A 87 RMAEEKGRQL--LLADGKHS--AEEERQAIQYLLD-LRCDAIMIYPR-FL-SVDEIDDIIDA--HSQPIMVL 149 (338)
T ss_dssp HHHHHTTCEE--EEEECTTS--HHHHHHHHHHHHH-TTCSEEEECCS-SS-CHHHHHHHHHH--CSSCEEEE
T ss_pred HHHHHCCCEE--EEEeCCCC--hHHHHHHHHHHHh-CCCCEEEEeCC-CC-ChHHHHHHHHc--CCCCEEEE
Confidence 5566666544 33333322 2234456777665 36778877543 22 33456666554 46899987
No 359
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=36.21 E-value=21 Score=35.74 Aligned_cols=44 Identities=16% Similarity=0.128 Sum_probs=34.5
Q ss_pred HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcC
Q 007482 87 ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGP 130 (602)
Q Consensus 87 ~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGP 130 (602)
.+.++.|.+.|+++++|-+.|-=-.+.++.++.|.++|+-++|=
T Consensus 234 ~dti~~~~~ag~~~ivi~~g~si~~~~~~~i~~a~~~gi~~~~~ 277 (283)
T 4ggi_A 234 VATIHRAARAGLAGIVGEAGRLLVVDREAVIAAADDLGLFVLGV 277 (283)
T ss_dssp HHHHHHHHHTTCCEEEEETTBCEETTHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHcCCeEEEEcCCCcEEeCHHHHHHHHHHcCCEEEEe
Confidence 56788899999999888666641124678999999999999873
No 360
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=36.20 E-value=35 Score=33.80 Aligned_cols=54 Identities=24% Similarity=0.385 Sum_probs=35.7
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----Cc------------H---HHH----HHHHHhcC-CCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG-----RD------------E---YSL----VEALKQGK-VNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~-----~~------------~---~~f----~~~~r~~~-~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++..+ |- .| . ..| .+..++.. ..||||+..-|..-.|
T Consensus 49 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 127 (279)
T 3g64_A 49 LRDLLAELSRRRAVRALVLAGE-GRGFCSGGDVDEIIGATLSMDTARLLDFNRMTGQVVRAVRECPFPVIAALHGVAAGA 127 (279)
T ss_dssp HHHHHHHHHHTTCCSEEEEEEC-SSCSBCCBCTTTTHHHHTTCCHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEEETH
T ss_pred HHHHHHHHHhCCCceEEEEECC-CCceecCcCHHHHhhccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEEEcCeeccc
Confidence 4577788888999999999988 51 01 0 012 22223332 6899999998876654
No 361
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=36.12 E-value=2.2e+02 Score=27.81 Aligned_cols=176 Identities=9% Similarity=0.068 Sum_probs=85.3
Q ss_pred CHHHHhhcCCCccEEEEecCChh-hHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCee--EcCCccccccc
Q 007482 62 TVEAACAAHPMADVFINFSSFRS-AAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV--IGPATVGGIQA 138 (602)
Q Consensus 62 sv~~i~~~~p~vDlavi~vp~~~-~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~ri--iGPNc~G~~~~ 138 (602)
.+.+...+.+ .++.+....... .....++.+.+.++.++|+.+..... ..+.+.+++.++.+ ++-...+.-.+
T Consensus 84 gi~~~a~~~g-~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~---~~~~~~~~~~~iPvV~~~~~~~~~~~~ 159 (338)
T 3dbi_A 84 HAARMAEEKG-RQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSV---DEIDDIIDAHSQPIMVLNRRLRKNSSH 159 (338)
T ss_dssp HHHHHHHHTT-CEEEEEECTTSHHHHHHHHHHHHHTTCSEEEECCSSSCH---HHHHHHHHHCSSCEEEESSCCSSSGGG
T ss_pred HHHHHHHHCC-CEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCCh---HHHHHHHHcCCCCEEEEcCCCCCCCCC
Confidence 3444444443 677665543221 12336777777899999887654442 45667778888654 34322110000
Q ss_pred CcccccccCCcccccccccCCCCCcEEEEecChhH------HHHHHHHHHhcCCceeEE-eeccCCCCCCCCHHHHHHHh
Q 007482 139 GAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGM------SNELYNTIARVTDGIYEG-IAIGGDVFPGSTLSDHILRF 211 (602)
Q Consensus 139 ~~~~l~~~~~~~~~~~p~~~~~~G~valvSQSG~l------~~~~~~~~~~~g~G~s~~-vs~Gn~~~~dv~~~d~l~~l 211 (602)
.. ..++..+.....-.......++|++++-.-.. .....+.+.+.|+.+... +-.|+.. .+-...-+-++|
T Consensus 160 ~V-~~D~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~-~~~~~~~~~~ll 237 (338)
T 3dbi_A 160 SV-WCDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIANGKWT-PASGAEGVEMLL 237 (338)
T ss_dssp EE-CBCHHHHHHHHHHHHHHTTCCSEEEECCCTTCHHHHHHHHHHHHHHHHTTCCCCGGGEECCCSS-HHHHHHHHHHHH
T ss_pred EE-EEChHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHHHCCCCCCcceEEeCCCC-HHHHHHHHHHHH
Confidence 00 00000000000000001246689999764322 122445566777765421 2223221 022223344556
Q ss_pred hcCCCccEEEEEEecCCCcHHHHHHHHHhcCCCCC
Q 007482 212 NNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKP 246 (602)
Q Consensus 212 ~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~~~KP 246 (602)
...|+..+|+..-. ...-.+++++++...+.|
T Consensus 238 ~~~~~~~ai~~~nd---~~A~g~~~al~~~G~~vP 269 (338)
T 3dbi_A 238 ERGAKFSALVASND---DMAIGAMKALHERGVAVP 269 (338)
T ss_dssp HTTCCCSEEEESSH---HHHHHHHHHHHHTTCCTT
T ss_pred cCCCCCeEEEECCh---HHHHHHHHHHHHcCCCCC
Confidence 67777777765322 223467888888665544
No 362
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=36.06 E-value=1.2e+02 Score=30.26 Aligned_cols=19 Identities=5% Similarity=-0.011 Sum_probs=14.2
Q ss_pred HHHHHhhCCCC---cEEEEecC
Q 007482 88 SSMAALKQPTI---RVVAIIAE 106 (602)
Q Consensus 88 ~~~e~~~~~gv---~~~viis~ 106 (602)
.++++|.+.++ +.+|.+|+
T Consensus 111 ~l~~~~~~~~~~~~~~iv~~SS 132 (372)
T 1db3_A 111 RLLEAIRFLGLEKKTRFYQAST 132 (372)
T ss_dssp HHHHHHHHTTCTTTCEEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEeCC
Confidence 46788887787 67777775
No 363
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=36.02 E-value=67 Score=26.84 Aligned_cols=115 Identities=10% Similarity=0.166 Sum_probs=73.3
Q ss_pred CcEEEEecChhHHHHHHHHHHh-cCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecC-CCcHHHHHHHHH
Q 007482 162 GSVGFVSKSGGMSNELYNTIAR-VTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELG-GRDEYSLVEALK 239 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~-~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g-~~~~~~f~~~~r 239 (602)
-+|-+|...-.....+...+.+ .|.-+ +.. .+..+.++++.+.....+|++-+... ..++-++++.+|
T Consensus 5 ~~ilivdd~~~~~~~l~~~L~~~~~~~v---~~~-------~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~ 74 (140)
T 3lua_A 5 GTVLLIDYFEYEREKTKIIFDNIGEYDF---IEV-------ENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIR 74 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHCCCEE---EEE-------CSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHhccCccE---EEE-------CCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHH
Confidence 4688888888888888777776 55533 222 23457777776634566776665533 346789999999
Q ss_pred h--cCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHh
Q 007482 240 Q--GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFEK 310 (602)
Q Consensus 240 ~--~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~~ 310 (602)
+ .....|||++-. ... .....-+.++|+. ..-+.++|...++.+..+
T Consensus 75 ~~~~~~~~~ii~ls~-~~~-----------------------~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~ 127 (140)
T 3lua_A 75 NNSRTANTPVIIATK-SDN-----------------------PGYRHAALKFKVSDYILKPYPTKRLENSVRSVLKI 127 (140)
T ss_dssp HSGGGTTCCEEEEES-CCC-----------------------HHHHHHHHHSCCSEEEESSCCTTHHHHHHHHHHCC
T ss_pred hCcccCCCCEEEEeC-CCC-----------------------HHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHh
Confidence 8 557889998842 111 1112223356643 356888988888777644
No 364
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=35.79 E-value=26 Score=34.45 Aligned_cols=54 Identities=19% Similarity=0.230 Sum_probs=34.7
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--C---c------HHHHHHHHHhcC-CCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG--R---D------EYSLVEALKQGK-VNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~--~---~------~~~f~~~~r~~~-~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++-.+ |- . | .+.+....++.. ..||||+..-|..-.|
T Consensus 41 L~~al~~~~~d~~vr~vvltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 106 (256)
T 3pe8_A 41 FFRALSDAQNDDDVDVVIVTGA-DPVFCAGLDLKELGDTTELPDISPKWPDMTKPVIGAINGAAVTG 106 (256)
T ss_dssp HHHHHHHHHHCTTCSEEEEEES-TTCSBCCBCTTTC---------CCCCCCCSSCEEEEECSEEETH
T ss_pred HHHHHHHHHhCCCeEEEEEECC-CCCccCCcCHHHHhhhHHHHHHHHHHHhCCCCEEEEECCeeech
Confidence 4577888889999999999988 51 1 1 122222233333 7899999998876654
No 365
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=35.46 E-value=1.8e+02 Score=29.07 Aligned_cols=95 Identities=7% Similarity=-0.029 Sum_probs=47.1
Q ss_pred cEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCC--Cccccc-------cCcee----ecccccCCHHHHhhcCCCc
Q 007482 11 TQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAE--GFQKLF-------FGQEE----IAIPVHSTVEAACAAHPMA 73 (602)
Q Consensus 11 s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~--~~~~~~-------~g~~v----~G~~~y~sv~~i~~~~p~v 73 (602)
.+++|.|.+|. +++.|++.|++++.-..-+... ...+.+ .+..+ ..+.-..++.++.... ++
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~ 103 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-KP 103 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-CC
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc-CC
Confidence 44555565444 7788888999875333212210 011111 01111 1222233444544432 26
Q ss_pred cEEEEecCChh-----------------hHHHHHHHhhCCCC---cEEEEecC
Q 007482 74 DVFINFSSFRS-----------------AAASSMAALKQPTI---RVVAIIAE 106 (602)
Q Consensus 74 Dlavi~vp~~~-----------------~~~~~~e~~~~~gv---~~~viis~ 106 (602)
|.+|-+..... ....++++|.+.++ +.+|.+|+
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS 156 (375)
T 1t2a_A 104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST 156 (375)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecc
Confidence 88887654311 01246778877787 67777775
No 366
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=35.45 E-value=1.1e+02 Score=25.36 Aligned_cols=114 Identities=10% Similarity=0.024 Sum_probs=66.7
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|-++...-.....+...+...+ ++..+.... +..+.++++.+. ...+|++=++....++-++++.+|+..
T Consensus 5 ~Ilivdd~~~~~~~l~~~l~~~~-~~~~v~~~~-------~~~~al~~~~~~-~~dlvilD~~lp~~~g~~~~~~l~~~~ 75 (133)
T 3b2n_A 5 SLIIAEDQNMLRQAMVQLIKLHG-DFEILADTD-------NGLDAMKLIEEY-NPNVVILDIEMPGMTGLEVLAEIRKKH 75 (133)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHS-SEEEEEEES-------CHHHHHHHHHHH-CCSEEEECSSCSSSCHHHHHHHHHHTT
T ss_pred EEEEECCCHHHHHHHHHHHhhCC-CcEEEEEcC-------CHHHHHHHHhhc-CCCEEEEecCCCCCCHHHHHHHHHHHC
Confidence 35666666666666666666544 333333332 234777777553 235676665544457889999999855
Q ss_pred CCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHH
Q 007482 243 VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFE 309 (602)
Q Consensus 243 ~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~ 309 (602)
...|||++- +.... .....++ ++|+. ..-+.++|...++.+..
T Consensus 76 ~~~~ii~ls-~~~~~----------------------~~~~~~~-~~ga~~~l~Kp~~~~~L~~~i~~~~~ 122 (133)
T 3b2n_A 76 LNIKVIIVT-TFKRP----------------------GYFEKAV-VNDVDAYVLKERSIEELVETINKVNN 122 (133)
T ss_dssp CSCEEEEEE-SCCCH----------------------HHHHHHH-HTTCSEEEETTSCHHHHHHHHHHHHC
T ss_pred CCCcEEEEe-cCCCH----------------------HHHHHHH-HcCCcEEEECCCCHHHHHHHHHHHHc
Confidence 677888873 22111 2222333 45653 45678888888876653
No 367
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=35.37 E-value=60 Score=31.58 Aligned_cols=54 Identities=20% Similarity=0.265 Sum_probs=34.9
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----C----------cHHH----HHHHHHhc-CCCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG-----R----------DEYS----LVEALKQG-KVNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~-----~----------~~~~----f~~~~r~~-~~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++..+ |- . +..+ +.+..++. ...||||+..-|..-.|
T Consensus 32 l~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 105 (254)
T 3gow_A 32 LYAALKEGEEDREVRALLLTGA-GRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEALSGLEKPLVVAVNGVAAGA 105 (254)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTCSBCCBCGGGTTTSCCCHHHHTHHHHHHHHHHHTCSSCEEEEECSEEETH
T ss_pred HHHHHHHHhcCCCeEEEEEECC-CCcccCCCChHHHhhcchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehH
Confidence 4567777888899999988887 51 0 1111 22233333 37899999998876543
No 368
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=35.19 E-value=42 Score=32.44 Aligned_cols=58 Identities=10% Similarity=0.032 Sum_probs=30.2
Q ss_pred CCcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecC
Q 007482 9 KTTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 81 (602)
Q Consensus 9 p~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp 81 (602)
|.++++|.|.+|. +++.|++.|++++ ++. -.. ..+.-..++.++.... ++|.+|-+..
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~-~~~-r~~------------~Dl~d~~~~~~~~~~~-~~d~vih~A~ 72 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVI-PTD-VQD------------LDITNVLAVNKFFNEK-KPNVVINCAA 72 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEE-EEC-TTT------------CCTTCHHHHHHHHHHH-CCSEEEECCC
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEE-ecc-Ccc------------CCCCCHHHHHHHHHhc-CCCEEEECCc
Confidence 3445555555554 7778888888754 333 111 1122233455555422 2688776654
No 369
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=35.06 E-value=44 Score=32.08 Aligned_cols=88 Identities=15% Similarity=0.113 Sum_probs=45.9
Q ss_pred EEEEeeCCcH----HHHHHHhc--CCeEEEEEeCCCCCCcccccc--Ccee--ecccccCCHHHHhhcCCCccEEEEecC
Q 007482 12 QALFYNYKQL----PIQRMLDF--DFLCVAGIINPGAEGFQKLFF--GQEE--IAIPVHSTVEAACAAHPMADVFINFSS 81 (602)
Q Consensus 12 ~avv~g~~~~----~~~~~~~~--g~~~V~gv~~p~~~~~~~~~~--g~~v--~G~~~y~sv~~i~~~~p~vDlavi~vp 81 (602)
+.|. |.+|. +++.|++. |++++.-...|.+. ..+. +-++ ..+.-..++.++.+ ++|.+|.+..
T Consensus 2 ilVt-GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~a~ 74 (286)
T 2zcu_A 2 IAIT-GATGQLGHYVIESLMKTVPASQIVAIVRNPAKA---QALAAQGITVRQADYGDEAALTSALQ---GVEKLLLISS 74 (286)
T ss_dssp EEEE-STTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC---HHHHHTTCEEEECCTTCHHHHHHHTT---TCSEEEECC-
T ss_pred EEEE-cCCchHHHHHHHHHHhhCCCceEEEEEcChHhh---hhhhcCCCeEEEcCCCCHHHHHHHHh---CCCEEEEeCC
Confidence 4445 54443 77778777 88865333213221 0000 0011 12222334455443 4798887654
Q ss_pred Ch-----hhHHHHHHHhhCCCCcEEEEecC
Q 007482 82 FR-----SAAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 82 ~~-----~~~~~~~e~~~~~gv~~~viis~ 106 (602)
.. .....++++|.+.|++.+|.+|+
T Consensus 75 ~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 75 SEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp -------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 21 12456788888788988888876
No 370
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=35.02 E-value=44 Score=32.78 Aligned_cols=54 Identities=19% Similarity=0.278 Sum_probs=33.9
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--------------Cc-----------HHHHHHHHHhcC-CCCCEEEEEeCcCcc
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG--------------RD-----------EYSLVEALKQGK-VNKPVVAWVSGTCAR 257 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~--------------~~-----------~~~f~~~~r~~~-~~KPVv~~k~Gr~~~ 257 (602)
+.+.++.+.+||++|+|++..+ |- .+ .+.+.+..++.. ..||||+..-|..-.
T Consensus 43 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 121 (267)
T 3oc7_A 43 LHQGLRDASSDPAVRVVVLAHT-GGTFCAGADLSEAGSGGSPSSAYDMAVERAREMAALMRAIVESRLPVIAAIDGHVRA 121 (267)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEC-SSEEECCBC-----------CHHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEET
T ss_pred HHHHHHHHhcCCCceEEEEECC-CCceeCCcCchhhhhccCchhhhhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCeecc
Confidence 4567777788888888888776 41 00 111222333333 789999999887655
Q ss_pred C
Q 007482 258 L 258 (602)
Q Consensus 258 g 258 (602)
|
T Consensus 122 g 122 (267)
T 3oc7_A 122 G 122 (267)
T ss_dssp T
T ss_pred c
Confidence 4
No 371
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=35.01 E-value=55 Score=32.16 Aligned_cols=24 Identities=21% Similarity=0.454 Sum_probs=16.2
Q ss_pred HHHHHHHhcCCCCCEEEEEeCcCccC
Q 007482 233 SLVEALKQGKVNKPVVAWVSGTCARL 258 (602)
Q Consensus 233 ~f~~~~r~~~~~KPVv~~k~Gr~~~g 258 (602)
++++.+++ ..||||+..-|..-.|
T Consensus 90 ~~~~~l~~--~~kPvIAav~G~a~Gg 113 (266)
T 3fdu_A 90 VLLKSAAR--LSKPLIIAVKGVAIGI 113 (266)
T ss_dssp HHHHHHHH--CCSCEEEEECSEEETH
T ss_pred HHHHHHHh--CCCCEEEEECCEEehH
Confidence 34444443 6899999998876543
No 372
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=34.87 E-value=28 Score=33.73 Aligned_cols=55 Identities=7% Similarity=0.027 Sum_probs=29.0
Q ss_pred EEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecC
Q 007482 12 QALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 81 (602)
Q Consensus 12 ~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~G~~~y~sv~~i~~~~p~vDlavi~vp 81 (602)
+++|.|.+|. +++.|++.|++++ ++. -.. ..+.-..++.++.... ++|.+|-+..
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~-~~~-r~~------------~D~~d~~~~~~~~~~~-~~d~vi~~a~ 65 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIY-PFD-KKL------------LDITNISQVQQVVQEI-RPHIIIHCAA 65 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEE-EEC-TTT------------SCTTCHHHHHHHHHHH-CCSEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEE-Eec-ccc------------cCCCCHHHHHHHHHhc-CCCEEEECCc
Confidence 4555565544 7777888888754 333 111 1122334555555432 2688876553
No 373
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=34.87 E-value=99 Score=30.57 Aligned_cols=94 Identities=11% Similarity=-0.016 Sum_probs=43.6
Q ss_pred EEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCC-ccccccCce--eecccccCCHHHHhhcCCCccEEEEecCChh
Q 007482 12 QALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEG-FQKLFFGQE--EIAIPVHSTVEAACAAHPMADVFINFSSFRS 84 (602)
Q Consensus 12 ~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~-~~~~~~g~~--v~G~~~y~sv~~i~~~~p~vDlavi~vp~~~ 84 (602)
+++|.|.+|. +++.|++.|++++.-...+.... ....+.+-+ ...+.-..++.++.... ++|.+|-+.....
T Consensus 23 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~D~vih~A~~~~ 101 (333)
T 2q1w_A 23 KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDL-QPDAVVHTAASYK 101 (333)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHH-CCSEEEECCCCCS
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhcc-CCcEEEECceecC
Confidence 4444454443 77888889998753332121110 000000000 01122223344444321 2677776543211
Q ss_pred --------------hHHHHHHHhhCCCCcEEEEecC
Q 007482 85 --------------AAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 85 --------------~~~~~~e~~~~~gv~~~viis~ 106 (602)
....++++|.+.|++.+|.+|+
T Consensus 102 ~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 102 DPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp CTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 1234667776667777776665
No 374
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=34.74 E-value=67 Score=30.84 Aligned_cols=87 Identities=11% Similarity=0.087 Sum_probs=49.3
Q ss_pred cEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCccccccCcee----ecccccCCHHHHhhcCCCccEEEEecCC
Q 007482 11 TQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEE----IAIPVHSTVEAACAAHPMADVFINFSSF 82 (602)
Q Consensus 11 s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v----~G~~~y~sv~~i~~~~p~vDlavi~vp~ 82 (602)
.+++|.|.+|. +++.|.+.|++++.-...+.+.. +..+ ..+.-..++.++.+ ++|++|-+...
T Consensus 4 k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~---~~D~vi~~Ag~ 74 (267)
T 3rft_A 4 KRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA------GPNEECVQCDLADANAVNAMVA---GCDGIVHLGGI 74 (267)
T ss_dssp EEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC------CTTEEEEECCTTCHHHHHHHHT---TCSEEEECCSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc------CCCCEEEEcCCCCHHHHHHHHc---CCCEEEECCCC
Confidence 34556565544 77788888887643222131110 1111 23444555666554 48998876422
Q ss_pred h--hh-----------HHHHHHHhhCCCCcEEEEecC
Q 007482 83 R--SA-----------AASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 83 ~--~~-----------~~~~~e~~~~~gv~~~viis~ 106 (602)
. .. ...++++|.+.+++.+|.+||
T Consensus 75 ~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 111 (267)
T 3rft_A 75 SVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASS 111 (267)
T ss_dssp CSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 1 11 124677888889999998886
No 375
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=34.40 E-value=42 Score=32.88 Aligned_cols=54 Identities=19% Similarity=0.226 Sum_probs=34.3
Q ss_pred HHHHHHHhhcCCCccEEEEEE-ecC-----CCcH----------HH----H-HHHHHhcC-CCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLG-ELG-----GRDE----------YS----L-VEALKQGK-VNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~-E~g-----~~~~----------~~----f-~~~~r~~~-~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++-. + | +.|- .. | .+..++.. ..||||+..-|..-.|
T Consensus 40 L~~al~~~~~d~~vr~vVltg~~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 115 (265)
T 2ppy_A 40 FNAAIDDIRFDPDIKVVIVMSDV-PKFFSAGADINFLRSADPRFKTQFCLFCNETLDKIARSPQVYIACLEGHTVGG 115 (265)
T ss_dssp HHHHHHHHHTCTTCCEEEEEECS-TTEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSSSEEEEEECSEEETH
T ss_pred HHHHHHHHHhCCCcEEEEEEcCC-CCeeeeCcCHHHHhccchhHHHHHHHHHHHHHHHHHcCCCCEEEEECCEEeeH
Confidence 456777788888888888888 5 4 1111 11 2 23333333 6899999998866543
No 376
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=34.39 E-value=73 Score=34.33 Aligned_cols=105 Identities=8% Similarity=0.043 Sum_probs=53.5
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhc-CC-eEEEEEeC-CCCC-Ccccccc-Cc-ee----------------ec-ccccCCH
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDF-DF-LCVAGIIN-PGAE-GFQKLFF-GQ-EE----------------IA-IPVHSTV 63 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~-g~-~~V~gv~~-p~~~-~~~~~~~-g~-~v----------------~G-~~~y~sv 63 (602)
-++|+||| |..|. ...++.+. |+ +++ +++- +.+. .+.+.+. |. .+ .| +.+-.+
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~-~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd- 95 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVL-GFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD- 95 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEE-EECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEE-EEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-
Confidence 36789997 56666 66677778 99 763 4441 2200 0111110 00 00 12 223333
Q ss_pred HHHhhcCCCccEEEEecCChh-----------hHHHHHHHhhC-CCCcEEEEecCCCCHHHHHHHHH
Q 007482 64 EAACAAHPMADVFINFSSFRS-----------AAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIA 118 (602)
Q Consensus 64 ~~i~~~~p~vDlavi~vp~~~-----------~~~~~~e~~~~-~gv~~~viis~Gf~E~~~~~l~~ 118 (602)
.++.. +.|+++++||.+. .+..+.+.+.+ ..-..+||..|+++....+++.+
T Consensus 96 ~ea~~---~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~ 159 (478)
T 3g79_A 96 FSRIS---ELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAK 159 (478)
T ss_dssp GGGGG---GCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHH
T ss_pred HHHHh---cCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHH
Confidence 34333 3799999998763 12333343332 12234777888887664445543
No 377
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=34.38 E-value=2e+02 Score=23.85 Aligned_cols=121 Identities=11% Similarity=0.110 Sum_probs=78.2
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHh
Q 007482 161 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 240 (602)
Q Consensus 161 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~ 240 (602)
+-+|-+|.........+...+.+.|.... +... .+..+.++.+.+. ...+|++-++....++.++++.+|+
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~~-v~~~-------~~~~~a~~~l~~~-~~dlii~D~~l~~~~g~~~~~~lr~ 75 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIHCQ-LEFV-------DNGAKALYQVQQA-KYDLIILDIGLPIANGFEVMSAVRK 75 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCCEE-EEEE-------SSHHHHHHHHTTC-CCSEEEECTTCGGGCHHHHHHHHHS
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCee-EEEE-------CCHHHHHHHhhcC-CCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 34688999988888888888877654421 2222 2345778877654 3567766655444568899999998
Q ss_pred --cCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCc----ccC-CHHHHHHHHHHHHHhHhh
Q 007482 241 --GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPT-SYEAFESAIKETFEKLVE 313 (602)
Q Consensus 241 --~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~-~~~el~~~~~~~~~~~~~ 313 (602)
.....|||++-.- ... ... .-+.++|+. ... +.++|...++.+..+..+
T Consensus 76 ~~~~~~~pii~~s~~-~~~----------------------~~~-~~~~~~ga~~~l~Kp~~~~~~l~~~i~~~l~~~~~ 131 (144)
T 3kht_A 76 PGANQHTPIVILTDN-VSD----------------------DRA-KQCMAAGASSVVDKSSNNVTDFYGRIYAIFSYWLT 131 (144)
T ss_dssp SSTTTTCCEEEEETT-CCH----------------------HHH-HHHHHTTCSEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCEEEEeCC-CCH----------------------HHH-HHHHHcCCCEEEECCCCcHHHHHHHHHHHHHHHHh
Confidence 4467898888422 111 222 223356642 344 889999999988887666
Q ss_pred c
Q 007482 314 E 314 (602)
Q Consensus 314 ~ 314 (602)
.
T Consensus 132 ~ 132 (144)
T 3kht_A 132 V 132 (144)
T ss_dssp T
T ss_pred c
Confidence 5
No 378
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=34.28 E-value=74 Score=31.70 Aligned_cols=52 Identities=19% Similarity=0.332 Sum_probs=32.3
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCC------c--------------------HHHHHHHHHhcCCCCCEEEEEeCcCcc
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGGR------D--------------------EYSLVEALKQGKVNKPVVAWVSGTCAR 257 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~~------~--------------------~~~f~~~~r~~~~~KPVv~~k~Gr~~~ 257 (602)
+.+.++.+.+||++|+|++-.+ |-+ | ..++++.+++ ..||||+..-|..-.
T Consensus 60 L~~al~~~~~d~~vr~vVltg~-G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~kPvIAaV~G~a~G 136 (289)
T 3t89_A 60 MIQALADARYDDNIGVIILTGA-GDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRT--CPKPVVAMVAGYSIG 136 (289)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-SSSEEECCBCCC----------------CTHHHHHHHHHH--CSSCEEEEECSEEET
T ss_pred HHHHHHHHHhCCCceEEEEEcC-CCCCccCCCChhhhhccccchhhhHHHHHHHHHHHHHHHc--CCCCEEEEECCEeeh
Confidence 4456666777888888888777 520 1 1122233332 689999998886654
Q ss_pred C
Q 007482 258 L 258 (602)
Q Consensus 258 g 258 (602)
|
T Consensus 137 g 137 (289)
T 3t89_A 137 G 137 (289)
T ss_dssp H
T ss_pred H
Confidence 3
No 379
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=33.98 E-value=1.2e+02 Score=29.57 Aligned_cols=110 Identities=12% Similarity=0.088 Sum_probs=62.7
Q ss_pred cEEEEecChhHHHHHHHHHHhc-CCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhc
Q 007482 163 SVGFVSKSGGMSNELYNTIARV-TDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 241 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~-g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~ 241 (602)
+|+++.-+|.|+..+...+.+. ++-+..++..+++ +.+++ ..++ .+++=| ..+....+.++.+
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~d------l~~~~---~~~~--DvvIDf-----T~p~a~~~~~~~a 65 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDP------LSLLT---DGNT--EVVIDF-----THPDVVMGNLEFL 65 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCC------THHHH---HTTC--CEEEEC-----SCTTTHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCC------HHHHh---ccCC--cEEEEc-----cChHHHHHHHHHH
Confidence 4888888999999999887654 7666655554322 23333 2233 444323 3333344443332
Q ss_pred C-CCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHH---HcCCcccCCHHHHHHHHHHHH
Q 007482 242 K-VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALR---DAGAVVPTSYEAFESAIKETF 308 (602)
Q Consensus 242 ~-~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~---qaGvi~v~~~~el~~~~~~~~ 308 (602)
. .+||+|+-++|-++.- .....++.+ +.+++...++.-=..+...+.
T Consensus 66 ~~~g~~~VigTTG~~~e~--------------------~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~l~ 116 (245)
T 1p9l_A 66 IDNGIHAVVGTTGFTAER--------------------FQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFA 116 (245)
T ss_dssp HHTTCEEEECCCCCCHHH--------------------HHHHHHHHHTSTTCEEEECSCCCHHHHHHHHHH
T ss_pred HHcCCCEEEcCCCCCHHH--------------------HHHHHHHHHhCCCCCEEEECCccHHHHHHHHHH
Confidence 2 7899999887755431 134455566 445677778555344443333
No 380
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=33.84 E-value=50 Score=32.90 Aligned_cols=54 Identities=19% Similarity=0.273 Sum_probs=35.0
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--------------CcH---HHH----HHHHHhcC-CCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG--------------RDE---YSL----VEALKQGK-VNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~--------------~~~---~~f----~~~~r~~~-~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++..+ |- .+. +++ .+..++.. ..||||+..-|..-.|
T Consensus 58 L~~al~~~~~d~~vr~vVltg~-G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 133 (286)
T 3myb_A 58 LGEAFGTLAEDESVRAVVLAAS-GKAFCAGHDLKEMRAEPSREYYEKLFARCTDVMLAIQRLPAPVIARVHGIATAA 133 (286)
T ss_dssp HHHHHHHHHTCTTCCEEEEEEC-SSCSBCCBCHHHHHSSCCHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSCEETH
T ss_pred HHHHHHHHHhCCCeEEEEEECC-CCCccCCcChhhhhccccHHHHHHHHHHHHHHHHHHHcCCCCEEEEECCeehHH
Confidence 4577778888999999999887 51 011 112 22233333 7899999998876544
No 381
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=33.62 E-value=41 Score=38.23 Aligned_cols=76 Identities=16% Similarity=0.114 Sum_probs=60.9
Q ss_pred EecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcCCCCC
Q 007482 167 VSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKP 246 (602)
Q Consensus 167 vSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~~~KP 246 (602)
++-++.-...+...+.++|+-+ +.-.+..|.+.++.+|++..+|++..+ ..+..|++.+|+...+.|
T Consensus 12 ~~~~~~~i~~L~~~Le~~g~~V----------~~a~s~~Da~~~i~~~~~i~avIld~d---~~~~~ll~~Ir~~~~~iP 78 (715)
T 3n75_A 12 VYFKEEPIRELHRALERLNFQI----------VYPNDRDDLLKLIENNARLCGVIFDWD---KYNLELCEEISKMNENLP 78 (715)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEE----------ECCSSHHHHHHHHHHCTTEEEEEEEHH---HHHHHHHHHHHHHCTTCE
T ss_pred cccchHHHHHHHHHHHHCCcEE----------EEeCCHHHHHHHHHhCCCceEEEEecc---ccHHHHHHHHHHhCCCCC
Confidence 4556666677888888887665 225778999999999999999999999 246789999999778999
Q ss_pred EEEEEeCcC
Q 007482 247 VVAWVSGTC 255 (602)
Q Consensus 247 Vv~~k~Gr~ 255 (602)
|.++....+
T Consensus 79 VFl~~~~~~ 87 (715)
T 3n75_A 79 LYAFANTYS 87 (715)
T ss_dssp EEEECCTTC
T ss_pred EEEEecCCc
Confidence 999875543
No 382
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=33.52 E-value=28 Score=34.42 Aligned_cols=53 Identities=15% Similarity=0.196 Sum_probs=34.2
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC------CcH-----------HHH----HHHHHhc-CCCCCEEEEEeCcCcc
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG------RDE-----------YSL----VEALKQG-KVNKPVVAWVSGTCAR 257 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~------~~~-----------~~f----~~~~r~~-~~~KPVv~~k~Gr~~~ 257 (602)
+.+.++.+.+|+++++|++-.+ |- .|- ..| .+..++. ...||||+..-|..-.
T Consensus 44 L~~al~~~~~d~~vr~vVltg~-g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 118 (272)
T 1hzd_A 44 LSKAVDALKSDKKVRTIIIRSE-VPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALG 118 (272)
T ss_dssp HHHHHHHHHHCSSCSEEEEEES-BTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEEEESEEEET
T ss_pred HHHHHHHHHhCCCeEEEEEecC-CCCCCcCCCChhhhhccChHHHHHHHHHHHHHHHHHHhCCCCEEEEeCceEEe
Confidence 4566777888999999999987 52 111 122 2223333 3789999998776544
No 383
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=33.45 E-value=2e+02 Score=27.50 Aligned_cols=176 Identities=8% Similarity=-0.045 Sum_probs=87.3
Q ss_pred cCCHHHHhhcCCCccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCcccccccC
Q 007482 60 HSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAG 139 (602)
Q Consensus 60 y~sv~~i~~~~p~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~~~~ 139 (602)
...+++...+.+ .++.+............++.+.+.++.++|+.+....+ +.++.+++.|+.++-=|.. .-.+.
T Consensus 29 ~~gi~~~a~~~g-~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~----~~~~~l~~~~iPvV~~~~~-~~~~~ 102 (294)
T 3qk7_A 29 ISWIGIELGKRG-LDLLLIPDEPGEKYQSLIHLVETRRVDALIVAHTQPED----FRLQYLQKQNFPFLALGRS-HLPKP 102 (294)
T ss_dssp HHHHHHHHHHTT-CEEEEEEECTTCCCHHHHHHHHHTCCSEEEECSCCSSC----HHHHHHHHTTCCEEEESCC-CCSSC
T ss_pred HHHHHHHHHHCC-CEEEEEeCCChhhHHHHHHHHHcCCCCEEEEeCCCCCh----HHHHHHHhCCCCEEEECCC-CCCCC
Confidence 334444444443 77777655432223567777777899999887765433 3455667778865522221 00000
Q ss_pred cccc--cccCCcccccccccCCCCCcEEEEecChhHH------HHHHHHHHhcCCcee--EEeeccCCCCCCCCHHHHHH
Q 007482 140 AFKI--GDTAGTIDNIIHCKLYRPGSVGFVSKSGGMS------NELYNTIARVTDGIY--EGIAIGGDVFPGSTLSDHIL 209 (602)
Q Consensus 140 ~~~l--~~~~~~~~~~~p~~~~~~G~valvSQSG~l~------~~~~~~~~~~g~G~s--~~vs~Gn~~~~dv~~~d~l~ 209 (602)
...+ ++..+.....-........+|++++-+.... ....+.+.+.|+-+. .++...... +-...-+-+
T Consensus 103 ~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~--~~~~~~~~~ 180 (294)
T 3qk7_A 103 YAWFDFDNHAGASLAVKRLLELGHQRIAFVSTDARISYVDQRLQGYVQTMSEAGLMPLAGYLQKADPTR--PGGYLAASR 180 (294)
T ss_dssp CEEEEECHHHHHHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHHHHHHHTTTCCCCTTCEEEECSSH--HHHHHHHHH
T ss_pred CCEEEcChHHHHHHHHHHHHHCCCceEEEEeCCcccchHHHHHHHHHHHHHHCCCCCChhHeecCCCCH--HHHHHHHHH
Confidence 0000 0000000000000012456899997654221 223445666676542 233332222 233344556
Q ss_pred HhhcCCCccEEEEEEecCCCcHHHHHHHHHhcCCCCC
Q 007482 210 RFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKP 246 (602)
Q Consensus 210 ~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~~~KP 246 (602)
+|...|...+|+..-. .-...+++++++...+.|
T Consensus 181 ~l~~~~~~~ai~~~nd---~~A~g~~~al~~~G~~vP 214 (294)
T 3qk7_A 181 LLALEVPPTAIITDCN---MLGDGVASALDKAGLLGG 214 (294)
T ss_dssp HHHSSSCCSEEEESSH---HHHHHHHHHHHHTTCSST
T ss_pred HHcCCCCCcEEEECCH---HHHHHHHHHHHHcCCCCC
Confidence 6777777777765322 233567888888655544
No 384
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=33.31 E-value=84 Score=26.42 Aligned_cols=117 Identities=14% Similarity=0.110 Sum_probs=73.7
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcC-CceeEEeeccCCCCCCCCHHHHHHHhhcC-CCccEEEEEEecCCCcHHHHHHH
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVT-DGIYEGIAIGGDVFPGSTLSDHILRFNNI-PQVKMMVVLGELGGRDEYSLVEA 237 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g-~G~s~~vs~Gn~~~~dv~~~d~l~~l~~D-p~t~~I~ly~E~g~~~~~~f~~~ 237 (602)
...+|-+|...-.....+...+.+.| +-+ +...+. .+.+..+.+. ....+|++-+.....++-.+++.
T Consensus 19 ~~~~ilivdd~~~~~~~l~~~L~~~g~~~v---~~~~~~-------~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~ 88 (146)
T 4dad_A 19 GMINILVASEDASRLAHLARLVGDAGRYRV---TRTVGR-------AAQIVQRTDGLDAFDILMIDGAALDTAELAAIEK 88 (146)
T ss_dssp GGCEEEEECSCHHHHHHHHHHHHHHCSCEE---EEECCC-------HHHHTTCHHHHTTCSEEEEECTTCCHHHHHHHHH
T ss_pred CCCeEEEEeCCHHHHHHHHHHHhhCCCeEE---EEeCCH-------HHHHHHHHhcCCCCCEEEEeCCCCCccHHHHHHH
Confidence 56789999999998888888888765 432 222222 2444555443 45567777766444567889999
Q ss_pred HHhcCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHh
Q 007482 238 LKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEK 310 (602)
Q Consensus 238 ~r~~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~ 310 (602)
+|+.....|||++- +.... .....+ .++|+ ...-+.++|...++.+..+
T Consensus 89 l~~~~~~~~ii~lt-~~~~~----------------------~~~~~~-~~~ga~~~l~Kp~~~~~L~~~i~~~~~~ 141 (146)
T 4dad_A 89 LSRLHPGLTCLLVT-TDASS----------------------QTLLDA-MRAGVRDVLRWPLEPRALDDALKRAAAQ 141 (146)
T ss_dssp HHHHCTTCEEEEEE-SCCCH----------------------HHHHHH-HTTTEEEEEESSCCHHHHHHHHHHHHHT
T ss_pred HHHhCCCCcEEEEe-CCCCH----------------------HHHHHH-HHhCCceeEcCCCCHHHHHHHHHHHHhh
Confidence 98866677888873 22211 112222 25554 3456888888888776654
No 385
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=33.22 E-value=1.5e+02 Score=24.34 Aligned_cols=117 Identities=8% Similarity=-0.015 Sum_probs=75.0
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhc
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 241 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~ 241 (602)
=+|-+|.........+...+.+.+.- +.. -.+..+.++.+.+. ...+|++-++....++.++++.+|+.
T Consensus 8 ~~ilivdd~~~~~~~l~~~L~~~~~~---v~~-------~~~~~~a~~~l~~~-~~dlvi~d~~l~~~~g~~~~~~l~~~ 76 (137)
T 3hdg_A 8 LKILIVEDDTDAREWLSTIISNHFPE---VWS-------AGDGEEGERLFGLH-APDVIITDIRMPKLGGLEMLDRIKAG 76 (137)
T ss_dssp CCEEEECSCHHHHHHHHHHHHTTCSC---EEE-------ESSHHHHHHHHHHH-CCSEEEECSSCSSSCHHHHHHHHHHT
T ss_pred cEEEEEeCCHHHHHHHHHHHHhcCcE---EEE-------ECCHHHHHHHHhcc-CCCEEEEeCCCCCCCHHHHHHHHHhc
Confidence 36889999988888887777763321 222 22455777777654 34677776664556789999999986
Q ss_pred CCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHhHhh
Q 007482 242 KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEKLVE 313 (602)
Q Consensus 242 ~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~~~~ 313 (602)
....|||++- +.... ... .-+.++|+ ...-+.++|...++.+.++...
T Consensus 77 ~~~~~ii~~s-~~~~~----------------------~~~-~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~~~~ 128 (137)
T 3hdg_A 77 GAKPYVIVIS-AFSEM----------------------KYF-IKAIELGVHLFLPKPIEPGRLMETLEDFRHIKLA 128 (137)
T ss_dssp TCCCEEEECC-CCCCH----------------------HHH-HHHHHHCCSEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEe-cCcCh----------------------HHH-HHHHhCCcceeEcCCCCHHHHHHHHHHHHHHHhc
Confidence 6677877762 21111 122 22335564 3456899999999888765433
No 386
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=33.11 E-value=33 Score=29.49 Aligned_cols=35 Identities=9% Similarity=-0.070 Sum_probs=20.3
Q ss_pred CccEEEEecCChhhHHHHHHHhhCCCCcEEEEecC
Q 007482 72 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 72 ~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~ 106 (602)
++|.+|+++|....-..+...+.+.+.+.++..+.
T Consensus 70 ~~d~vi~~~~~~~~n~~~~~~a~~~~~~~iia~~~ 104 (141)
T 3llv_A 70 GVSAVLITGSDDEFNLKILKALRSVSDVYAIVRVS 104 (141)
T ss_dssp TCSEEEECCSCHHHHHHHHHHHHHHCCCCEEEEES
T ss_pred cCCEEEEecCCHHHHHHHHHHHHHhCCceEEEEEc
Confidence 47888888876543344455555555555555443
No 387
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=33.09 E-value=66 Score=32.89 Aligned_cols=23 Identities=22% Similarity=0.343 Sum_probs=16.5
Q ss_pred HHHHHHHhhcCCCccEEEEEEecC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELG 227 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g 227 (602)
+.+.++.+.+||++++|+|-.+ |
T Consensus 89 L~~al~~~~~d~~vrvVVltG~-G 111 (334)
T 3t8b_A 89 LYRVLDHARMSPDVGVVLLTGN-G 111 (334)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEC-C
T ss_pred HHHHHHHHHhCCCceEEEEeCC-C
Confidence 4456667777888888888777 5
No 388
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=32.95 E-value=51 Score=32.66 Aligned_cols=54 Identities=28% Similarity=0.327 Sum_probs=34.7
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----CcHH-------------HHH----HHHHhcC-CCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG-----RDEY-------------SLV----EALKQGK-VNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~-----~~~~-------------~f~----~~~r~~~-~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++-.+ |- .|-. ++. +..++.. ..||||+..-|..-.|
T Consensus 60 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 136 (276)
T 3rrv_A 60 LARLWQRLTDDPTARAAVITGA-GRAFSAGGDFGYLKELSADADLRAKTIRDGREIVLGMARCRIPVVAAVNGPAVGL 136 (276)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTCSBCCBCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSCEETH
T ss_pred HHHHHHHHHhCCCceEEEEECC-CCcccCCcCHHHHhhcccchHHHHHHHHHHHHHHHHHHhCCCCEEEEECceeeHH
Confidence 4577788888999999999887 52 1111 111 1222222 7899999998876544
No 389
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=32.86 E-value=1.2e+02 Score=32.09 Aligned_cols=150 Identities=12% Similarity=0.124 Sum_probs=86.4
Q ss_pred HHHHHhhCCCCcEEEEecCCCCHH---HHHHHHHHHHhC-----CCeeEcCCcccccccCcccccc-cCCcccccccccC
Q 007482 88 SSMAALKQPTIRVVAIIAEGVPEA---DTKQLIAYARSN-----NKVVIGPATVGGIQAGAFKIGD-TAGTIDNIIHCKL 158 (602)
Q Consensus 88 ~~~e~~~~~gv~~~viis~Gf~E~---~~~~l~~~a~~~-----g~riiGPNc~G~~~~~~~~l~~-~~~~~~~~~p~~~ 158 (602)
++.+.+....-+.+.|+|+..+|. |.+.+.+.+++. |++|+--||.|+--....+... ..+.+........
T Consensus 87 aI~~~~~~~~P~~I~V~tTC~~e~IGdDi~~v~~~~~~~~~~~~~~pvi~v~tpgf~gs~~~G~~~a~~al~~~l~~~~~ 166 (458)
T 1mio_B 87 AVKNIFSLYNPDIIAVHTTCLSETLGDDLPTYISQMEDAGSIPEGKLVIHTNTPSYVGSHVTGFANMVQGIVNYLSENTG 166 (458)
T ss_dssp HHHHHHHHTCCSEEEEEECHHHHHHTCCHHHHHHHHHHTTCSCTTCEEEEECCCTTSSCHHHHHHHHHHHHHHHHCCCCS
T ss_pred HHHHHHHhcCCCEEEEECCcHHHHHhcCHHHHHHHHHHhcCCCCCCeEEEEECCCCcccHHHHHHHHHHHHHHHHccccC
Confidence 344444456788899999988887 566666666554 7999999999987322101100 0011110111112
Q ss_pred CCCCcEEEEecC--hhHHHHHHHHHHhcCCceeEE-----------------eeccCCCCCCCCHHHHHHHhhcCCCccE
Q 007482 159 YRPGSVGFVSKS--GGMSNELYNTIARVTDGIYEG-----------------IAIGGDVFPGSTLSDHILRFNNIPQVKM 219 (602)
Q Consensus 159 ~~~G~valvSQS--G~l~~~~~~~~~~~g~G~s~~-----------------vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~ 219 (602)
..++.|-++.-. .+=..++-..+.+.|+-+..+ ++.|+.. + +-+.+=++-+.
T Consensus 167 ~~~~~VNilg~~~~~~d~~eik~lL~~~Gi~v~~l~d~s~~ld~~~~~~~~~~~~gg~~-----~----~ei~~~~~A~~ 237 (458)
T 1mio_B 167 AKNGKINVIPGFVGPADMREIKRLFEAMDIPYIMFPDTSGVLDGPTTGEYKMYPEGGTK-----I----EDLKDTGNSDL 237 (458)
T ss_dssp CCCSCEEEECCSCCHHHHHHHHHHHHHHTCCEEESSCCTTTSSCCCCSSCCSSCSCSBC-----H----HHHHTTSSCSE
T ss_pred CCCCcEEEECCCCCHHHHHHHHHHHHHcCCcEEEeccccccccCcccCccceeCCCCCc-----H----HHHHhhccCCE
Confidence 357789998643 222356777777778876542 3334433 3 44556667666
Q ss_pred EEEEEecCCCcHHHHHHHHHhcCCCCCEEEE
Q 007482 220 MVVLGELGGRDEYSLVEALKQGKVNKPVVAW 250 (602)
Q Consensus 220 I~ly~E~g~~~~~~f~~~~r~~~~~KPVv~~ 250 (602)
-++... ..+...++.+++ +.+.|.+..
T Consensus 238 niv~~~---~~~~~~A~~Le~-~~GiP~~~~ 264 (458)
T 1mio_B 238 TLSLGS---YASDLGAKTLEK-KCKVPFKTL 264 (458)
T ss_dssp EEEESH---HHHHHHHHHHHH-HSCCCEEEE
T ss_pred EEEEch---hhHHHHHHHHHH-HhCCCEEec
Confidence 665544 334556666654 357898774
No 390
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=32.64 E-value=70 Score=31.59 Aligned_cols=52 Identities=21% Similarity=0.300 Sum_probs=31.7
Q ss_pred HHHHHHHhhcCCCccEEEEEE-----ecCCC------c-------------------HHHHHHHHHhcCCCCCEEEEEeC
Q 007482 204 LSDHILRFNNIPQVKMMVVLG-----ELGGR------D-------------------EYSLVEALKQGKVNKPVVAWVSG 253 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~-----E~g~~------~-------------------~~~f~~~~r~~~~~KPVv~~k~G 253 (602)
+.+.++.+.+||++|+|++-. + |-+ | ...+++.+++ ..||||+..-|
T Consensus 42 L~~al~~~~~d~~vr~vVltg~~~~~~-G~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~kPvIAav~G 118 (275)
T 4eml_A 42 LYDAFCNAREDNRIGVVLLTGAGPHSD-GKYAFCSGGDQSVRGEGGYIDDQGTPRLNVLDLQRLIRS--MPKVVIALVAG 118 (275)
T ss_dssp HHHHHHHHHHCTTCCEEEEEECCCCTT-SCCEEECCBCCC--------------CCCHHHHHHHHHH--SSSEEEEEECS
T ss_pred HHHHHHHHHhCCCceEEEEeCCCcCcC-CCCceeCCcChhhhhcccccchhhHHHHHHHHHHHHHHh--CCCCEEEEECC
Confidence 345666667777777777777 5 420 1 1223333333 68999999988
Q ss_pred cCccC
Q 007482 254 TCARL 258 (602)
Q Consensus 254 r~~~g 258 (602)
..-.|
T Consensus 119 ~a~Gg 123 (275)
T 4eml_A 119 YAIGG 123 (275)
T ss_dssp EEETH
T ss_pred eeehH
Confidence 76543
No 391
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=32.58 E-value=1.9e+02 Score=27.50 Aligned_cols=80 Identities=11% Similarity=0.064 Sum_probs=44.0
Q ss_pred CCCcEEEEecChhH------HHHHHHHHHhcCCceeE--EeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcH
Q 007482 160 RPGSVGFVSKSGGM------SNELYNTIARVTDGIYE--GIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDE 231 (602)
Q Consensus 160 ~~G~valvSQSG~l------~~~~~~~~~~~g~G~s~--~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~ 231 (602)
...+|++++..... .....+.+.+.|+.+.. ++...... +-....+.++|...|+..+|+..-. ...
T Consensus 124 G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~ai~~~~d---~~a 198 (291)
T 3egc_A 124 GHTRIGAIVGSAGLMTSRERLKGFRAAMSAAGLPVRQEWIAAGGVRA--DNGRDGAIKVLTGADRPTALLTSSH---RIT 198 (291)
T ss_dssp TCCSEEEECSCTTSHHHHHHHHHHHHHHHHTTCCCCGGGEEC--------CCHHHHHHHHTC-CCCSEEEESSH---HHH
T ss_pred CCCEEEEEeCCCCCcCHHHHHHHHHHHHHHcCCCCCHHHeEeCCCCh--hHHHHHHHHHHhCCCCCcEEEECCc---HHH
Confidence 45578887655421 12234556667776532 33323333 5566677778878888888765333 334
Q ss_pred HHHHHHHHhcCCC
Q 007482 232 YSLVEALKQGKVN 244 (602)
Q Consensus 232 ~~f~~~~r~~~~~ 244 (602)
..+++++++...+
T Consensus 199 ~g~~~al~~~g~~ 211 (291)
T 3egc_A 199 EGAMQALNVLGLR 211 (291)
T ss_dssp HHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCC
Confidence 5688888886544
No 392
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=32.57 E-value=15 Score=36.35 Aligned_cols=37 Identities=11% Similarity=0.123 Sum_probs=25.5
Q ss_pred CccEEEEecCChhhHHHHHHHhhCCCCc---EEEEecCCCCH
Q 007482 72 MADVFINFSSFRSAAASSMAALKQPTIR---VVAIIAEGVPE 110 (602)
Q Consensus 72 ~vDlavi~vp~~~~~~~~~e~~~~~gv~---~~viis~Gf~E 110 (602)
+.|+++++||+.. +.++++.+.. .++ .+|.++.|+..
T Consensus 83 ~~D~vil~vk~~~-~~~v~~~i~~-~l~~~~~iv~~~nG~~~ 122 (317)
T 2qyt_A 83 TVDYILFCTKDYD-MERGVAEIRP-MIGQNTKILPLLNGADI 122 (317)
T ss_dssp CEEEEEECCSSSC-HHHHHHHHGG-GEEEEEEEEECSCSSSH
T ss_pred CCCEEEEecCccc-HHHHHHHHHh-hcCCCCEEEEccCCCCc
Confidence 4899999999975 6788887753 332 24444678753
No 393
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=32.56 E-value=45 Score=32.90 Aligned_cols=54 Identities=20% Similarity=0.175 Sum_probs=33.8
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----CcH------------------HHHHHHHHhcC-CCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG-----RDE------------------YSLVEALKQGK-VNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~-----~~~------------------~~f~~~~r~~~-~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++-.+ |- .|- +.+.+..++.. ..||||+..-|..-.|
T Consensus 36 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 113 (268)
T 3i47_A 36 MRIRLDSAINDTNVRVIVLKAN-GKHFSAGADLTWMQSMANFTEEENLEDSLVLGNLMYSISQSPKPTIAMVQGAAFGG 113 (268)
T ss_dssp HHHHHHHHHHCTTCSEEEEEEC-SSCSBCSBCHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETH
T ss_pred HHHHHHHHHhCCCeEEEEEECC-CCCeeCCCChhhhhccccccHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEEhH
Confidence 3466777778888888888877 51 011 11222333333 7899999998876543
No 394
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=32.52 E-value=52 Score=32.69 Aligned_cols=54 Identities=20% Similarity=0.238 Sum_probs=34.7
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----CcHH-----------H----HHHHHHhcC-CCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG-----RDEY-----------S----LVEALKQGK-VNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~-----~~~~-----------~----f~~~~r~~~-~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++-.+ |- .|-. . +.+..++.. ..||||+..-|..-.|
T Consensus 55 L~~al~~~~~d~~vr~vVltg~-g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 129 (277)
T 4di1_A 55 IVAAADELGRRDDIGAVVLFGG-HEIFSAGDDMPELRTLNAPEADTAARVRLEAIDAVAAIPKPTVAAVTGYALGA 129 (277)
T ss_dssp HHHHHHHHHHCTTCCEEEEECC-SSCSBCCBCHHHHHTCCHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETH
T ss_pred HHHHHHHHHhCCCcEEEEEECC-CCCEecCcCcccccccChHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeEehh
Confidence 4577778888999999998877 41 1111 1 122233332 7899999998866543
No 395
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=32.45 E-value=78 Score=32.58 Aligned_cols=54 Identities=19% Similarity=0.266 Sum_probs=34.2
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCC------cHH--------------HHHH----HHHhc-CCCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGGR------DEY--------------SLVE----ALKQG-KVNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~~------~~~--------------~f~~----~~r~~-~~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++..+ |-+ |-. +|.. ...+. ...||||+..-|..-.|
T Consensus 41 l~~al~~~~~d~~vr~vvltg~-G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~Gg 119 (353)
T 4hdt_A 41 MAERLAAWENDDSVRAVLLTGA-GERGLCAGGDVVAIYHSAKADGAEARRFWFDEYRLNAHIGRYPKPYVSIMDGIVMGG 119 (353)
T ss_dssp HHHHHHHHHTCTTCCEEEEEES-SSSBSBCCBCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHCSSCEEEEECBEEETH
T ss_pred HHHHHHHHHhCCCceEEEEEeC-CCCCEecCcCHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCCCEEEEeECceeec
Confidence 4567778888888888888887 632 211 2221 22222 26899999988866543
No 396
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=32.24 E-value=2.1e+02 Score=23.36 Aligned_cols=113 Identities=14% Similarity=0.097 Sum_probs=68.4
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhc
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 241 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~ 241 (602)
.+|-+|.-.-.....+...+.+.| +. +.... +..+.++++.+. ...+|++-+.....++..+++.+++.
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g--~~-v~~~~-------~~~~a~~~~~~~-~~dlvl~D~~l~~~~g~~~~~~l~~~ 72 (136)
T 1mvo_A 4 KKILVVDDEESIVTLLQYNLERSG--YD-VITAS-------DGEEALKKAETE-KPDLIVLDVMLPKLDGIEVCKQLRQQ 72 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTT--CE-EEEES-------SHHHHHHHHHHH-CCSEEEEESSCSSSCHHHHHHHHHHT
T ss_pred CEEEEEECCHHHHHHHHHHHHHCC--cE-EEEec-------CHHHHHHHHhhc-CCCEEEEecCCCCCCHHHHHHHHHcC
Confidence 357788888777777777776654 33 22222 344667766553 24667666654445788999999986
Q ss_pred CCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHH
Q 007482 242 KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFE 309 (602)
Q Consensus 242 ~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~ 309 (602)
....|||++-....... . ....++|+ ....+.++|...++.+..
T Consensus 73 ~~~~~ii~~s~~~~~~~----------------------~--~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 120 (136)
T 1mvo_A 73 KLMFPILMLTAKDEEFD----------------------K--VLGLELGADDYMTKPFSPREVNARVKAILR 120 (136)
T ss_dssp TCCCCEEEEECTTCCCC----------------------H--HHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHH----------------------H--HHHHhCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 56789988743222110 1 11224454 345688888888876664
No 397
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=32.23 E-value=1.7e+02 Score=28.38 Aligned_cols=93 Identities=11% Similarity=0.053 Sum_probs=47.1
Q ss_pred cEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCCcccccc-Cce--eecccccCCHHHHhhcCCCccEEEEecCCh
Q 007482 11 TQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEGFQKLFF-GQE--EIAIPVHSTVEAACAAHPMADVFINFSSFR 83 (602)
Q Consensus 11 s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~~~~~~~-g~~--v~G~~~y~sv~~i~~~~p~vDlavi~vp~~ 83 (602)
++.|. |.+|. +++.|++.|++++ +..-..... ...+. +-+ ...+.-..++.++.++. .+|.++.+....
T Consensus 2 ~vlVT-GatG~iG~~l~~~L~~~G~~V~-~~~r~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~vi~~a~~~ 77 (311)
T 2p5y_A 2 RVLVT-GGAGFIGSHIVEDLLARGLEVA-VLDNLATGK-RENVPKGVPFFRVDLRDKEGVERAFREF-RPTHVSHQAAQA 77 (311)
T ss_dssp EEEEE-TTTSHHHHHHHHHHHTTTCEEE-EECCCSSCC-GGGSCTTCCEECCCTTCHHHHHHHHHHH-CCSEEEECCSCC
T ss_pred EEEEE-eCCcHHHHHHHHHHHHCCCEEE-EEECCCcCc-hhhcccCeEEEECCCCCHHHHHHHHHhc-CCCEEEECcccc
Confidence 34444 54433 7788888999864 332111110 00110 001 01222233455544422 378888765331
Q ss_pred h-----------------hHHHHHHHhhCCCCcEEEEecCC
Q 007482 84 S-----------------AAASSMAALKQPTIRVVAIIAEG 107 (602)
Q Consensus 84 ~-----------------~~~~~~e~~~~~gv~~~viis~G 107 (602)
. ....++++|.+.|++.+|.+|+.
T Consensus 78 ~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~ 118 (311)
T 2p5y_A 78 SVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTG 118 (311)
T ss_dssp CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEH
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 1 01356788887889888888763
No 398
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=32.21 E-value=63 Score=32.20 Aligned_cols=54 Identities=19% Similarity=0.362 Sum_probs=34.0
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----Cc------------------HHHHH----HHHHhcC-CCCCEEEEEeCcC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG-----RD------------------EYSLV----EALKQGK-VNKPVVAWVSGTC 255 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~-----~~------------------~~~f~----~~~r~~~-~~KPVv~~k~Gr~ 255 (602)
+.+.++.+.+||++|+|++-.+ |- .| ..++. +..++.. ..||||+..-|..
T Consensus 56 L~~al~~~~~d~~vr~vVltg~-G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a 134 (290)
T 3sll_A 56 FKQMLVDISHDNDVRAVVITGA-GKGFCSGADQKSAGPIPHIGGLTQPTIALRSMELLDEVILTLRRMHQPVIAAINGAA 134 (290)
T ss_dssp HHHHHHHHHTCTTCCEEEEEES-TTCSBCC------CCCSSCTTCCHHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEE
T ss_pred HHHHHHHHHcCCCeeEEEEECC-CCCeeCCcChHHHhcccccccccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence 4466777888889999988877 41 01 11222 2233322 7899999998876
Q ss_pred ccC
Q 007482 256 ARL 258 (602)
Q Consensus 256 ~~g 258 (602)
-.|
T Consensus 135 ~Gg 137 (290)
T 3sll_A 135 IGG 137 (290)
T ss_dssp ETH
T ss_pred hHH
Confidence 543
No 399
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=31.92 E-value=2.9e+02 Score=27.39 Aligned_cols=116 Identities=14% Similarity=0.172 Sum_probs=60.5
Q ss_pred CCCHHHHHHHHHHHHhCCCeeEcCCcccccccCcccccccCCcccccccccCCCCCcEEEEecC-------hhHHHHHHH
Q 007482 107 GVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKS-------GGMSNELYN 179 (602)
Q Consensus 107 Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQS-------G~l~~~~~~ 179 (602)
+++|+..+++.+.|++.|-+ .||... . .+ . .-+.+.||+|..+ ..+...++.
T Consensus 35 ~Vs~~tr~rV~~~a~~lgY~--~pn~~a-----~-~l-----------~--~~~s~~Igvi~~~~~~~~~~~~~~~~~~~ 93 (366)
T 3h5t_A 35 QLSAELRQRILDTAEDMGYL--GPDPVA-----R-SL-----------R--TRRAGAIGVLLTEDLTYAFEDMASVDFLA 93 (366)
T ss_dssp GSCHHHHHHHHHHHHHTTC-----------------------------------CCEEEEEESSCTTHHHHSHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCC--CCCHHH-----H-Hh-----------h--cCCCCEEEEEecCCccccccCHHHHHHHH
Confidence 57888999999999998754 255321 0 11 0 0134568877654 223334443
Q ss_pred HHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcCCCCCEEEE
Q 007482 180 TIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAW 250 (602)
Q Consensus 180 ~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~~~KPVv~~ 250 (602)
.+.+.--|+...+...+... +-...++++.+.+ ..+..|++.-- .....+++.+++ .++|||++
T Consensus 94 gi~~~a~g~~~~~~~~~~~~-~~~~~~~~~~l~~-~~vdGiIi~~~---~~~~~~~~~l~~--~~iPvV~i 157 (366)
T 3h5t_A 94 GVAQAAGDTQLTLIPASPAS-SVDHVSAQQLVNN-AAVDGVVIYSV---AKGDPHIDAIRA--RGLPAVIA 157 (366)
T ss_dssp HHHHHSSSCEEEEEECCCCT-TCCHHHHHHHHHT-CCCSCEEEESC---CTTCHHHHHHHH--HTCCEEEE
T ss_pred HHHHHHhhCCEEEEEcCCCc-cHHHHHHHHHHHh-CCCCEEEEecC---CCChHHHHHHHH--CCCCEEEE
Confidence 33322115555544433220 2357788888765 46777776633 222244454444 47899987
No 400
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=31.71 E-value=2.2e+02 Score=23.44 Aligned_cols=116 Identities=13% Similarity=0.106 Sum_probs=72.1
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcC----CCccEEEEEEecCCCcHHHHHHH
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNI----PQVKMMVVLGELGGRDEYSLVEA 237 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~D----p~t~~I~ly~E~g~~~~~~f~~~ 237 (602)
-+|-+|.........+...+.+.|.. ..+... .+..+.++++.+. ....+|++-++....++-+|++.
T Consensus 10 ~~iLivdd~~~~~~~l~~~l~~~~~~-~~v~~~-------~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~ 81 (146)
T 3ilh_A 10 DSVLLIDDDDIVNFLNTTIIRMTHRV-EEIQSV-------TSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDL 81 (146)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTTCCE-EEEEEE-------SSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhcCCC-eeeeec-------CCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHH
Confidence 46888988888777777777655442 122222 2345777777752 44577877777556788999999
Q ss_pred HHh----cCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcC-C----cccCCHHHHHHHHHHHH
Q 007482 238 LKQ----GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG-A----VVPTSYEAFESAIKETF 308 (602)
Q Consensus 238 ~r~----~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaG-v----i~v~~~~el~~~~~~~~ 308 (602)
+|+ .....|||++-.. .. .....-..+.| + ...-+.++|...++...
T Consensus 82 l~~~~~~~~~~~~ii~~t~~-~~-----------------------~~~~~~~~~~g~~~~~l~KP~~~~~L~~~i~~~~ 137 (146)
T 3ilh_A 82 FKQHFQPMKNKSIVCLLSSS-LD-----------------------PRDQAKAEASDWVDYYVSKPLTANALNNLYNKVL 137 (146)
T ss_dssp HHHHCGGGTTTCEEEEECSS-CC-----------------------HHHHHHHHHCSSCCEEECSSCCHHHHHHHHHHHH
T ss_pred HHHhhhhccCCCeEEEEeCC-CC-----------------------hHHHHHHHhcCCcceeeeCCCCHHHHHHHHHHHH
Confidence 998 4467788777322 11 12222334444 3 34567888888777655
Q ss_pred H
Q 007482 309 E 309 (602)
Q Consensus 309 ~ 309 (602)
.
T Consensus 138 ~ 138 (146)
T 3ilh_A 138 N 138 (146)
T ss_dssp C
T ss_pred H
Confidence 3
No 401
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=31.60 E-value=34 Score=33.23 Aligned_cols=53 Identities=28% Similarity=0.394 Sum_probs=30.1
Q ss_pred HHHHHHhhcCCCccEEEEEE-ecCC-----Cc-----------H-HHH----HHHHHhc-CCCCCEEEEEeCcCccC
Q 007482 205 SDHILRFNNIPQVKMMVVLG-ELGG-----RD-----------E-YSL----VEALKQG-KVNKPVVAWVSGTCARL 258 (602)
Q Consensus 205 ~d~l~~l~~Dp~t~~I~ly~-E~g~-----~~-----------~-~~f----~~~~r~~-~~~KPVv~~k~Gr~~~g 258 (602)
.+.++.+.+||++|+|++-. + |- .| . +.| .+..++. ...||||+..-|..-.|
T Consensus 33 ~~al~~~~~d~~vr~vVltg~~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~Gg 108 (250)
T 2a7k_A 33 KDALARANADDSVRAVVVYGGA-ERSFSAGGDFNEVKQLSRSEDIEEWIDRVIDLYQAVLNVNKPTIAAVDGYAIGM 108 (250)
T ss_dssp HHHHHHHHHCTTCCEEEEECCT-TSCSBCBSCHHHHHTC-CHHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEEETH
T ss_pred HHHHHHHHhCCCcEEEEEECCC-CCCccCCcCHHHHhhcCchhhHHHHHHHHHHHHHHHHcCCCCEEEEECCeEeHH
Confidence 35556666677777777766 4 31 11 1 122 2223333 37899999998866543
No 402
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=31.32 E-value=1e+02 Score=31.03 Aligned_cols=91 Identities=16% Similarity=0.032 Sum_probs=51.1
Q ss_pred CCcEEEEe-eCCcH-HHHHHHhcCCeEEEEEeCCCCCCccccc--cC--------ceeecccccCCHHHHhhcCCCccEE
Q 007482 9 KTTQALFY-NYKQL-PIQRMLDFDFLCVAGIINPGAEGFQKLF--FG--------QEEIAIPVHSTVEAACAAHPMADVF 76 (602)
Q Consensus 9 p~s~avv~-g~~~~-~~~~~~~~g~~~V~gv~~p~~~~~~~~~--~g--------~~v~G~~~y~sv~~i~~~~p~vDla 76 (602)
.++++||| |.-|. ....|.+.|+++ ..+. .+. +.+.+ .| .....+++..+.+++ + +.|++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V-~~~~-r~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~---~~D~V 74 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAI-NVLA-RGA--TLQALQTAGLRLTEDGATHTLPVRATHDAAAL-G---EQDVV 74 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCE-EEEC-CHH--HHHHHHHTCEEEEETTEEEEECCEEESCHHHH-C---CCSEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEE-EEEE-ChH--HHHHHHHCCCEEecCCCeEEEeeeEECCHHHc-C---CCCEE
Confidence 47899997 33344 666777778874 2333 211 00000 01 111224456677764 3 47999
Q ss_pred EEecCChhhHHHHHHHhhCC-C-CcEEEEecCCC
Q 007482 77 INFSSFRSAAASSMAALKQP-T-IRVVAIIAEGV 108 (602)
Q Consensus 77 vi~vp~~~~~~~~~e~~~~~-g-v~~~viis~Gf 108 (602)
|++||+. .+.++++.+... + =..++.++.|+
T Consensus 75 ilavk~~-~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 75 IVAVKAP-ALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp EECCCHH-HHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred EEeCCch-hHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 9999986 477888877631 1 12455557786
No 403
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=31.23 E-value=53 Score=32.58 Aligned_cols=45 Identities=7% Similarity=0.024 Sum_probs=35.9
Q ss_pred cCChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCC
Q 007482 80 SSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNN 124 (602)
Q Consensus 80 vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g 124 (602)
++.....++.++.+.+.||..+|++...+...+-+.+.+++++++
T Consensus 30 ~~~~~~~~~ll~~~~~~GV~~~V~v~~~~~~~~n~~l~~la~~~p 74 (303)
T 4do7_A 30 LARDYLPDALHPLMHAQALGASIAVQARAGRDETAFLLELACDEA 74 (303)
T ss_dssp GSSCBCHHHHHHHHHHTTCCEEEEECCSSSHHHHHHHHHHHTTCT
T ss_pred ccCCCCHHHHHHHHHhcCCcEEEEEccCCcHHHHHHHHHHHHhCC
Confidence 455566788899999999999999988776666777888887764
No 404
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=30.83 E-value=86 Score=30.68 Aligned_cols=25 Identities=12% Similarity=0.183 Sum_probs=16.3
Q ss_pred CcEEEEee--CCcH-HHHHHHhcCCeEE
Q 007482 10 TTQALFYN--YKQL-PIQRMLDFDFLCV 34 (602)
Q Consensus 10 ~s~avv~g--~~~~-~~~~~~~~g~~~V 34 (602)
+++.|+|| .-|+ +++.|++.|++++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~ 32 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFSHPTF 32 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEE
T ss_pred cEEEEEcCCchhHHHHHHHHHhCCCcEE
Confidence 45666653 2333 8888888898864
No 405
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=30.82 E-value=2.9e+02 Score=25.99 Aligned_cols=173 Identities=6% Similarity=0.035 Sum_probs=86.5
Q ss_pred cCCHHHHhhcCCCccEEEEecCChh-hHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE--cCCccc--
Q 007482 60 HSTVEAACAAHPMADVFINFSSFRS-AAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI--GPATVG-- 134 (602)
Q Consensus 60 y~sv~~i~~~~p~vDlavi~vp~~~-~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii--GPNc~G-- 134 (602)
...+.+...+.+ .++.+....... .....++.+.+.++.++|++.....+ +.++.+++.|+.++ +-..-+
T Consensus 32 ~~gi~~~a~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~~----~~~~~l~~~~iPvV~~~~~~~~~~ 106 (292)
T 3k4h_A 32 IRGISSFAHVEG-YALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSREND----RIIQYLHEQNFPFVLIGKPYDRKD 106 (292)
T ss_dssp HHHHHHHHHHTT-CEEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCCBTTC----HHHHHHHHTTCCEEEESCCSSCTT
T ss_pred HHHHHHHHHHcC-CEEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCCh----HHHHHHHHCCCCEEEECCCCCCCC
Confidence 334445444443 677654433321 12346777777899999887654432 45666777888755 322111
Q ss_pred ---ccccCcccccccCCcccccccccCCCCCcEEEEecChhHH------HHHHHHHHhcCCceeE-EeeccCCCCCCCCH
Q 007482 135 ---GIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMS------NELYNTIARVTDGIYE-GIAIGGDVFPGSTL 204 (602)
Q Consensus 135 ---~~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQSG~l~------~~~~~~~~~~g~G~s~-~vs~Gn~~~~dv~~ 204 (602)
.+.......+ -.....+- .....+|++++-..... ....+.+.+.|+.+.. .+-.++.. .+...
T Consensus 107 ~~~~V~~D~~~~g---~~a~~~L~--~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~-~~~~~ 180 (292)
T 3k4h_A 107 EITYVDNDNYTAA---REVAEYLI--SLGHKQIAFIGGGSDLLVTRDRLAGMSDALKLADIVLPKEYILHFDFS-RESGQ 180 (292)
T ss_dssp TSCEEECCHHHHH---HHHHHHHH--HTTCCCEEEEESCTTBHHHHHHHHHHHHHHHHTTCCCCGGGEEECCSS-HHHHH
T ss_pred CCCEEEECcHHHH---HHHHHHHH--HCCCceEEEEeCcccchhHHHHHHHHHHHHHHcCCCCChheEEecCCC-HHHHH
Confidence 1111110000 00000000 12456899998543321 2234556667776432 12223221 02233
Q ss_pred HHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcCCCCC
Q 007482 205 SDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKP 246 (602)
Q Consensus 205 ~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~~~KP 246 (602)
..+-++|...|+..+|+..-. .....+++++++...+.|
T Consensus 181 ~~~~~~l~~~~~~~ai~~~~d---~~a~g~~~al~~~g~~vP 219 (292)
T 3k4h_A 181 QAVEELMGLQQPPTAIMATDD---LIGLGVLSALSKKGFVVP 219 (292)
T ss_dssp HHHHHHHTSSSCCSEEEESSH---HHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHcCCCCCcEEEEcCh---HHHHHHHHHHHHhCCCCC
Confidence 445566777788888765433 334578888888655544
No 406
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=30.74 E-value=2.2e+02 Score=23.35 Aligned_cols=115 Identities=17% Similarity=0.179 Sum_probs=64.2
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|-+|.........+...+.+. ..+... .+..+.++.+.+. ...+|++-+.....++..+++.+|+..
T Consensus 5 ~iLivdd~~~~~~~l~~~l~~~----~~v~~~-------~~~~~a~~~~~~~-~~dlvi~D~~l~~~~g~~~~~~l~~~~ 72 (140)
T 3n53_A 5 KILIIDQQDFSRIELKNFLDSE----YLVIES-------KNEKEALEQIDHH-HPDLVILDMDIIGENSPNLCLKLKRSK 72 (140)
T ss_dssp EEEEECSCHHHHHHHHHHHTTT----SEEEEE-------SSHHHHHHHHHHH-CCSEEEEETTC------CHHHHHHTST
T ss_pred EEEEEeCCHHHHHHHHHHHHhc----ceEEEe-------CCHHHHHHHHhcC-CCCEEEEeCCCCCCcHHHHHHHHHcCc
Confidence 5778888888777777766544 222222 2355777777654 346776666544456778999998865
Q ss_pred --CCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcC-CcccCCHHHHHHHHHHHHHh
Q 007482 243 --VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG-AVVPTSYEAFESAIKETFEK 310 (602)
Q Consensus 243 --~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaG-vi~v~~~~el~~~~~~~~~~ 310 (602)
...|||++-.-..... ....-..| .+ + +...-+.++|...++.+..+
T Consensus 73 ~~~~~~ii~~s~~~~~~~---~~~~~~~g----~~--------------~~l~KP~~~~~l~~~i~~~~~~ 122 (140)
T 3n53_A 73 GLKNVPLILLFSSEHKEA---IVNGLHSG----AD--------------DYLTKPFNRNDLLSRIEIHLRT 122 (140)
T ss_dssp TCTTCCEEEEECC----C---TTTTTTCC----CS--------------EEEESSCCHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEecCCCHHH---HHHHHhcC----CC--------------eeeeCCCCHHHHHHHHHHHHhh
Confidence 6779888854332221 11111111 11 1 23456889999888877643
No 407
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=30.67 E-value=44 Score=33.44 Aligned_cols=64 Identities=16% Similarity=0.298 Sum_probs=41.8
Q ss_pred EeeccCCCCCCCC---HHHHHHHhhcCCCccEEEEEEe-cCCC--cHHHHHHHHHhcCCCCCEEEEEeCcCcc
Q 007482 191 GIAIGGDVFPGST---LSDHILRFNNIPQVKMMVVLGE-LGGR--DEYSLVEALKQGKVNKPVVAWVSGTCAR 257 (602)
Q Consensus 191 ~vs~Gn~~~~dv~---~~d~l~~l~~Dp~t~~I~ly~E-~g~~--~~~~f~~~~r~~~~~KPVv~~k~Gr~~~ 257 (602)
+|.+++.. .|-+ +..-|.++..++..|.|.||+. +|+. .+....+.+++. ++||+++..|...+
T Consensus 84 II~l~G~I-~d~~a~~iiaqL~~l~~ed~~k~I~L~INSPGGsV~ag~aIyd~I~~~--k~pV~t~v~G~AAS 153 (277)
T 1tg6_A 84 IVCVMGPI-DDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYI--LNPICTWCVGQAAS 153 (277)
T ss_dssp EEEEESSB-CHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHS--CSCEEEEEEEEEET
T ss_pred EEEEcCEE-CHHHHHHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHHHHHHhc--CCCEEEEEccEeHH
Confidence 56666664 1222 2334555555555799999999 4442 356677777774 58999999886554
No 408
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=30.33 E-value=1.2e+02 Score=30.58 Aligned_cols=20 Identities=20% Similarity=0.129 Sum_probs=14.4
Q ss_pred HHHHHHhhCC-CCcEEEEecC
Q 007482 87 ASSMAALKQP-TIRVVAIIAE 106 (602)
Q Consensus 87 ~~~~e~~~~~-gv~~~viis~ 106 (602)
..++++|.+. +++.+|.+|+
T Consensus 131 ~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 131 LKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HHHHHHHTTCSSCCEEEEEEE
T ss_pred HHHHHHHHHhCCCCeEEEeCC
Confidence 3467788777 7887777765
No 409
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=30.24 E-value=1.8e+02 Score=28.12 Aligned_cols=20 Identities=15% Similarity=0.215 Sum_probs=16.3
Q ss_pred HHHHHHhhCCCCcEEEEecC
Q 007482 87 ASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 87 ~~~~e~~~~~gv~~~viis~ 106 (602)
..++++|.+.|++.+|.+|+
T Consensus 94 ~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 94 FNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp HHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCc
Confidence 35788888889998888886
No 410
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=30.14 E-value=17 Score=35.63 Aligned_cols=54 Identities=24% Similarity=0.348 Sum_probs=35.0
Q ss_pred HHHHHHHhhcCCCccEEEEEEecC-----CCcHHHHHH---------------HHHhc--CCCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELG-----GRDEYSLVE---------------ALKQG--KVNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g-----~~~~~~f~~---------------~~r~~--~~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++-.+ | +.|-..|.. ..++. ...||||+..-|..-.|
T Consensus 44 l~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~kPvIAav~G~a~Gg 119 (258)
T 3lao_A 44 LALAMGEYERSEESRCAVLFAH-GEHFTAGLDLMELAPKLAASGFRYPDGGVDPWGVVQPRRSKPLVVAVQGTCWTA 119 (258)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-SSCSBCCBCHHHHGGGCBTTBCCCCTTCCCTTSCSSSCCCSCEEEEECSEEETH
T ss_pred HHHHHHHHhhCCCcEEEEEECC-CCCeecCcCHHHHhhccchhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeEhH
Confidence 4567777788888888888888 5 223233321 12233 36899999998866543
No 411
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=30.05 E-value=1.1e+02 Score=24.54 Aligned_cols=79 Identities=8% Similarity=0.061 Sum_probs=49.6
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|-+|...-.....+...+.+.| +..+.... +..+.++++.+. ...+|++-+.....++..+++.+++..
T Consensus 4 ~ilivdd~~~~~~~l~~~l~~~g--~~vv~~~~-------~~~~a~~~~~~~-~~dlil~D~~l~~~~g~~~~~~l~~~~ 73 (120)
T 1tmy_A 4 RVLIVDDAAFMRMMLKDIITKAG--YEVAGEAT-------NGREAVEKYKEL-KPDIVTMDITMPEMNGIDAIKEIMKID 73 (120)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTT--CEEEEEES-------SHHHHHHHHHHH-CCSEEEEECSCGGGCHHHHHHHHHHHC
T ss_pred eEEEEcCcHHHHHHHHHHHhhcC--cEEEEEEC-------CHHHHHHHHHhc-CCCEEEEeCCCCCCcHHHHHHHHHhhC
Confidence 46677777767666666666544 43222222 234667776553 346776666533356889999998866
Q ss_pred CCCCEEEEE
Q 007482 243 VNKPVVAWV 251 (602)
Q Consensus 243 ~~KPVv~~k 251 (602)
...|||++-
T Consensus 74 ~~~~ii~~s 82 (120)
T 1tmy_A 74 PNAKIIVCS 82 (120)
T ss_dssp TTCCEEEEE
T ss_pred CCCeEEEEe
Confidence 678988873
No 412
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=29.93 E-value=1.2e+02 Score=29.37 Aligned_cols=25 Identities=4% Similarity=0.017 Sum_probs=16.9
Q ss_pred CcEEEEee--CCcH-HHHHHHhcCCeEE
Q 007482 10 TTQALFYN--YKQL-PIQRMLDFDFLCV 34 (602)
Q Consensus 10 ~s~avv~g--~~~~-~~~~~~~~g~~~V 34 (602)
+++.|+|| .-|+ +++.|++.|++++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~ 32 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHPTY 32 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCcEE
Confidence 56666653 3344 8888888898864
No 413
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=29.91 E-value=80 Score=30.69 Aligned_cols=54 Identities=28% Similarity=0.408 Sum_probs=33.1
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----Cc---------HHH-----HHHHHHhcC-CCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG-----RD---------EYS-----LVEALKQGK-VNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~-----~~---------~~~-----f~~~~r~~~-~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++++|++-.+ |- .| ... +.+..++.. ..||||+..-|..-.|
T Consensus 35 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 108 (257)
T 2ej5_A 35 VTKALKQAGADPNVRCVVITGA-GRAFCAGEDLSGVTEEMDHGDVLRSRYAPMMKALHHLEKPVVAAVNGAAAGA 108 (257)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-SSCSBCCBCC-------CHHHHHHHTHHHHHHHHHHCCSCEEEEECSEEETH
T ss_pred HHHHHHHHhhCCCeEEEEEECC-CCCccCCcCHHHHhhccchhHHHHHHHHHHHHHHHhCCCCEEEEECccccch
Confidence 3466677778888888888876 41 01 111 222333332 7899999988866543
No 414
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=29.83 E-value=65 Score=31.74 Aligned_cols=54 Identities=24% Similarity=0.374 Sum_probs=35.6
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----CcHH-------------HHH----HHHHhc-CCCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG-----RDEY-------------SLV----EALKQG-KVNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~-----~~~~-------------~f~----~~~r~~-~~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++-.+ |- .|-. ++. +..++. ...||||+..-|..-.|
T Consensus 45 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 121 (272)
T 3qk8_A 45 LADVWPVIDRDPDVRVVLVRGE-GKAFSSGGSFELIDETIGDYEGRIRIMREARDLVLNLVNLDKPVVSAIRGPAVGA 121 (272)
T ss_dssp HHHHHHHHHHCTTCSEEEEEES-SSCSBCEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEEEHH
T ss_pred HHHHHHHHhhCCCceEEEEECC-CCCeeCCcCHHHHhccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehH
Confidence 5577888889999999999888 52 0111 111 122222 37899999998876543
No 415
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=29.38 E-value=55 Score=32.08 Aligned_cols=54 Identities=17% Similarity=0.075 Sum_probs=32.2
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC------CcHH---------------H----HHHHHHhc-CCCCCEEEEEeCcCcc
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG------RDEY---------------S----LVEALKQG-KVNKPVVAWVSGTCAR 257 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~------~~~~---------------~----f~~~~r~~-~~~KPVv~~k~Gr~~~ 257 (602)
+.+.++.+.+||++|+|++-.+ |- .|-. + +.+..++. ...||||+..-|..-.
T Consensus 36 L~~al~~~~~d~~vr~vVltg~-g~~FF~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 114 (263)
T 3lke_A 36 LLEAIRAGNNETSIHSIILQSK-HRAYFSSGPRLEDLLICASDQSDVRLREVLHVLNHCVLEIFTSPKVTVALINGYAYG 114 (263)
T ss_dssp HHHHHHHHHHCSSCCEEEEEES-CTTEEECBSCHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHTCSSEEEEEECSEEET
T ss_pred HHHHHHHHhcCCCeEEEEEEcC-CCceEecCcCHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeH
Confidence 4466666777777777777776 31 1111 1 12223332 3789999999887654
Q ss_pred C
Q 007482 258 L 258 (602)
Q Consensus 258 g 258 (602)
|
T Consensus 115 g 115 (263)
T 3lke_A 115 G 115 (263)
T ss_dssp H
T ss_pred H
Confidence 4
No 416
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=29.29 E-value=68 Score=31.24 Aligned_cols=117 Identities=11% Similarity=0.072 Sum_probs=68.5
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|+++.- |.++..+...+.+++--+..++..-++...++...+=++-+. +++ + .++ +..+....+.++ ..
T Consensus 5 kI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv~v~~dl~~l~-~~D--V---vID--ft~p~a~~~~~~-l~ 74 (243)
T 3qy9_A 5 KILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVK-GAD--V---AID--FSNPNLLFPLLD-ED 74 (243)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC--CCSCBCSCTTTCT-TCS--E---EEE--CSCHHHHHHHHT-SC
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCccccCCCceeCCHHHHh-CCC--E---EEE--eCChHHHHHHHH-Hh
Confidence 4888888 999999998877765333343443222100111111011112 333 3 344 567788888887 77
Q ss_pred CCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHHH
Q 007482 243 VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFE 309 (602)
Q Consensus 243 ~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~~ 309 (602)
.+||+|+-.+|-++.- -+..+++.++.+++.+.|+.==..+...+..
T Consensus 75 ~g~~vVigTTG~s~e~--------------------~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~ 121 (243)
T 3qy9_A 75 FHLPLVVATTGEKEKL--------------------LNKLDELSQNMPVFFSANMSYGVHALTKILA 121 (243)
T ss_dssp CCCCEEECCCSSHHHH--------------------HHHHHHHTTTSEEEECSSCCHHHHHHHHHHH
T ss_pred cCCceEeCCCCCCHHH--------------------HHHHHHHHhcCCEEEECCccHHHHHHHHHHH
Confidence 8999997665543321 1455667788899998888755555544444
No 417
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=29.28 E-value=51 Score=34.15 Aligned_cols=41 Identities=12% Similarity=0.119 Sum_probs=29.2
Q ss_pred HHHHHHHhhCCCCcEEEEec-C-CCCHHHHHHHHHHHHhCCCeeE
Q 007482 86 AASSMAALKQPTIRVVAIIA-E-GVPEADTKQLIAYARSNNKVVI 128 (602)
Q Consensus 86 ~~~~~e~~~~~gv~~~viis-~-Gf~E~~~~~l~~~a~~~g~rii 128 (602)
+.+ ++.+.++||+.+|..+ . |.. ...+.++++|++.|+.++
T Consensus 78 ~~e-l~~~~~aGv~tiV~~~g~~g~~-r~~~~l~~la~~~gi~i~ 120 (365)
T 3rhg_A 78 IFE-LNNFKELGGKTIVDATGSSSIG-RDIRKLKQVAELTGINVV 120 (365)
T ss_dssp HHH-HHHHHHTTEEEEEECCCSGGGT-CCHHHHHHHHHHHCCEEE
T ss_pred HHH-HHHHHhcCCCeEEEcCCCCCCC-CCHHHHHHHHHHHCCcEE
Confidence 444 4556668999988877 3 333 267788889999998775
No 418
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=29.21 E-value=1e+02 Score=33.06 Aligned_cols=188 Identities=14% Similarity=0.099 Sum_probs=108.4
Q ss_pred HHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCee---------------EcCCcccccccCcccccccCCcccc
Q 007482 88 SSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV---------------IGPATVGGIQAGAFKIGDTAGTIDN 152 (602)
Q Consensus 88 ~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~ri---------------iGPNc~G~~~~~~~~l~~~~~~~~~ 152 (602)
.+.| +...|...+.++.+-....+.+++.+.|++.|+-+ +|+..+|+-|.+...+ ...+..
T Consensus 122 Qi~e-a~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~~lga~iIGinnr~L~t~---~~dl~~ 197 (452)
T 1pii_A 122 QIYL-ARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVGINNRDLRDL---SIDLNR 197 (452)
T ss_dssp HHHH-HHHTTCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCSEEEEESEETTTT---EECTHH
T ss_pred HHHH-HHHcCCCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHCCCCEEEEeCCCCCCC---CCCHHH
Confidence 3555 44589999999999888777788888888888754 3777788766543111 011110
Q ss_pred cccccCCCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHH
Q 007482 153 IIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 232 (602)
Q Consensus 153 ~~p~~~~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~ 232 (602)
.......-|.++-+||-||=-+.+-+..+.+. .+.|=+|....-.-+....+.-|.. ..+|+. |+++++
T Consensus 198 ~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~----a~avLVGealmr~~d~~~~~~~l~~-~~~KIC------Git~~e 266 (452)
T 1pii_A 198 TRELAPKLGHNVTVISESGINTYAQVRELSHF----ANGFLIGSALMAHDDLHAAVRRVLL-GENKVC------GLTRGQ 266 (452)
T ss_dssp HHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT----CSEEEECHHHHTCSCHHHHHHHHHH-CSCEEC------CCCSHH
T ss_pred HHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh----CCEEEEcHHHcCCcCHHHHHHHHHH-Hhcccc------CCCcHH
Confidence 00000112445779999998877766655443 3445566543335567777777764 355655 889988
Q ss_pred HHHHHHHhcCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHH-----HHHcCCcccCCHHHHHHHHHHH
Q 007482 233 SLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQA-----LRDAGAVVPTSYEAFESAIKET 307 (602)
Q Consensus 233 ~f~~~~r~~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~-----~~qaGvi~v~~~~el~~~~~~~ 307 (602)
....+++...--.=.|.+ -.|+. . .+- .....+ .+..||.+-.+.+++.++++.+
T Consensus 267 da~~a~~~Gad~iGfIf~--~~SpR-----~-V~~------------~~a~~i~~~~~v~~VgVFvn~~~~~i~~~~~~~ 326 (452)
T 1pii_A 267 DAKAAYDAGAIYGGLIFV--ATSPR-----C-VNV------------EQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVL 326 (452)
T ss_dssp HHHHHHHHTCSEEEEECC--TTCTT-----B-CCH------------HHHHHHHHHCCCEEEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEeecC--CCCCC-----C-CCH------------HHHHHHHhcCCCCEEEEEeCCCHHHHHHHHHhc
Confidence 877776653311112221 11211 1 000 111122 2456778888888888887655
Q ss_pred HHh
Q 007482 308 FEK 310 (602)
Q Consensus 308 ~~~ 310 (602)
--+
T Consensus 327 ~ld 329 (452)
T 1pii_A 327 SLA 329 (452)
T ss_dssp TCS
T ss_pred CCC
Confidence 433
No 419
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=29.07 E-value=2e+02 Score=22.99 Aligned_cols=77 Identities=12% Similarity=0.120 Sum_probs=50.8
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|-+|...-.....+...+.+. |+. +... .+..+.++++.+. ...+|++-++....++..+++.+++..
T Consensus 5 ~ilivdd~~~~~~~l~~~l~~~--~~~-v~~~-------~~~~~a~~~~~~~-~~dlvl~D~~l~~~~g~~~~~~l~~~~ 73 (124)
T 1srr_A 5 KILIVDDQSGIRILLNEVFNKE--GYQ-TFQA-------ANGLQALDIVTKE-RPDLVLLDMKIPGMDGIEILKRMKVID 73 (124)
T ss_dssp EEEEECSCHHHHHHHHHHHHTT--TCE-EEEE-------SSHHHHHHHHHHH-CCSEEEEESCCTTCCHHHHHHHHHHHC
T ss_pred eEEEEeCCHHHHHHHHHHHHHC--CcE-EEEe-------CCHHHHHHHHhcc-CCCEEEEecCCCCCCHHHHHHHHHHhC
Confidence 5777777777777776666654 443 2222 2345677777653 346777766644467889999998766
Q ss_pred CCCCEEEE
Q 007482 243 VNKPVVAW 250 (602)
Q Consensus 243 ~~KPVv~~ 250 (602)
...|||++
T Consensus 74 ~~~~ii~~ 81 (124)
T 1srr_A 74 ENIRVIIM 81 (124)
T ss_dssp TTCEEEEE
T ss_pred CCCCEEEE
Confidence 67788887
No 420
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=29.00 E-value=2.4e+02 Score=23.23 Aligned_cols=120 Identities=14% Similarity=0.046 Sum_probs=76.6
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecC-CCcHHHHHHHHHh
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELG-GRDEYSLVEALKQ 240 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g-~~~~~~f~~~~r~ 240 (602)
-+|-+|...-.....+...+.+.|. . ++.. .+..+.++.+.+.....+|++-++.. ..++.++++.+|+
T Consensus 6 ~~ilivdd~~~~~~~l~~~L~~~g~--~-v~~~-------~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~ 75 (140)
T 3h5i_A 6 KKILIVEDSKFQAKTIANILNKYGY--T-VEIA-------LTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQ 75 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC--E-EEEE-------SSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHH
T ss_pred cEEEEEeCCHHHHHHHHHHHHHcCC--E-EEEe-------cChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHh
Confidence 4688888888888888888877653 2 2222 24568888887755667888877742 3678999999987
Q ss_pred cCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHhHh
Q 007482 241 GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLV 312 (602)
Q Consensus 241 ~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~~~~~ 312 (602)
. ...|||++-.-....- ....-..|+ .+. +...-+.++|...++.++.+.-
T Consensus 76 ~-~~~~ii~ls~~~~~~~---~~~~~~~g~--~~~---------------l~KP~~~~~l~~~i~~~l~~~~ 126 (140)
T 3h5i_A 76 I-SELPVVFLTAHTEPAV---VEKIRSVTA--YGY---------------VMKSATEQVLITIVEMALRLYE 126 (140)
T ss_dssp H-CCCCEEEEESSSSCCC---CGGGGGSCE--EEE---------------EETTCCHHHHHHHHHHHHHHHH
T ss_pred C-CCCCEEEEECCCCHHH---HHHHHhCCC--cEE---------------EeCCCCHHHHHHHHHHHHHHHH
Confidence 5 6789888854433321 111111111 001 3345688899988887776543
No 421
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=28.84 E-value=1.2e+02 Score=29.19 Aligned_cols=26 Identities=4% Similarity=-0.225 Sum_probs=16.9
Q ss_pred CcEEEEee--CCcH-HHHHHHhcCCeEEE
Q 007482 10 TTQALFYN--YKQL-PIQRMLDFDFLCVA 35 (602)
Q Consensus 10 ~s~avv~g--~~~~-~~~~~~~~g~~~V~ 35 (602)
+++.|+|| .-|+ +++.|++.|++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~ 31 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAGNPTYA 31 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHTCCEEE
T ss_pred cEEEEECCCchHHHHHHHHHHhCCCcEEE
Confidence 45666653 2233 78888888988643
No 422
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=28.62 E-value=53 Score=31.60 Aligned_cols=90 Identities=16% Similarity=0.069 Sum_probs=47.7
Q ss_pred cEEEEeeCCcH----HHHHHHhc--CCeEEEEEeCCCCCCcccccc--Ccee--ecccccCCHHHHhhcCCCccEEEEec
Q 007482 11 TQALFYNYKQL----PIQRMLDF--DFLCVAGIINPGAEGFQKLFF--GQEE--IAIPVHSTVEAACAAHPMADVFINFS 80 (602)
Q Consensus 11 s~avv~g~~~~----~~~~~~~~--g~~~V~gv~~p~~~~~~~~~~--g~~v--~G~~~y~sv~~i~~~~p~vDlavi~v 80 (602)
++.|. |.+|. +++.|++. |++++.-...+.+. +.+. +-++ ..+.-..++.++.. ++|.+|.+.
T Consensus 2 ~ilVt-GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~---~~l~~~~~~~~~~D~~d~~~l~~~~~---~~d~vi~~a 74 (287)
T 2jl1_A 2 SIAVT-GATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA---STLADQGVEVRHGDYNQPESLQKAFA---GVSKLLFIS 74 (287)
T ss_dssp CEEET-TTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT---HHHHHTTCEEEECCTTCHHHHHHHTT---TCSEEEECC
T ss_pred eEEEE-cCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH---hHHhhcCCeEEEeccCCHHHHHHHHh---cCCEEEEcC
Confidence 34444 54443 77778877 88865333212221 0000 0011 12222234445443 479888765
Q ss_pred CCh-------hhHHHHHHHhhCCCCcEEEEecCC
Q 007482 81 SFR-------SAAASSMAALKQPTIRVVAIIAEG 107 (602)
Q Consensus 81 p~~-------~~~~~~~e~~~~~gv~~~viis~G 107 (602)
... .....++++|.+.|++.+|.+|+.
T Consensus 75 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~ 108 (287)
T 2jl1_A 75 GPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYA 108 (287)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred CCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 431 123467888888899888888763
No 423
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=28.58 E-value=75 Score=29.57 Aligned_cols=20 Identities=10% Similarity=0.316 Sum_probs=14.4
Q ss_pred HHHHHHhhCCCCcEEEEecC
Q 007482 87 ASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 87 ~~~~e~~~~~gv~~~viis~ 106 (602)
..++++|.+.+++.+|.+|+
T Consensus 114 ~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 114 KNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEcC
Confidence 45677777777877777765
No 424
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=28.40 E-value=78 Score=31.01 Aligned_cols=54 Identities=19% Similarity=0.210 Sum_probs=34.7
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC------------C------cH---HHH----HHHHHhcC-CCCCEEEEEeCcCcc
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG------------R------DE---YSL----VEALKQGK-VNKPVVAWVSGTCAR 257 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~------------~------~~---~~f----~~~~r~~~-~~KPVv~~k~Gr~~~ 257 (602)
+.+.++.+.+||++++|++-.+ |- . .. ..+ .+..++.. ..||||+..-|..-.
T Consensus 35 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 113 (269)
T 1nzy_A 35 VTDALNRAEEDDSVGAVMITGA-EDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAG 113 (269)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTCSBCCBCGGGSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEET
T ss_pred HHHHHHHHhhCCCeeEEEEECC-CCCcccCcCHHHHhhcccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeec
Confidence 4567777888999999999886 41 0 11 122 22333333 789999998886654
Q ss_pred C
Q 007482 258 L 258 (602)
Q Consensus 258 g 258 (602)
|
T Consensus 114 g 114 (269)
T 1nzy_A 114 G 114 (269)
T ss_dssp H
T ss_pred H
Confidence 3
No 425
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=28.37 E-value=1.7e+02 Score=23.51 Aligned_cols=79 Identities=10% Similarity=0.160 Sum_probs=51.3
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|-+|..+-.....+...+.+.| +. ++... +..+.++++.+. ...+|++-++....++.++++.+|+..
T Consensus 4 ~ilivdd~~~~~~~l~~~l~~~g--~~-v~~~~-------~~~~a~~~~~~~-~~dlvi~D~~l~~~~g~~~~~~l~~~~ 72 (127)
T 2jba_A 4 RILVVEDEAPIREMVCFVLEQNG--FQ-PVEAE-------DYDSAVNQLNEP-WPDLILLAWMLPGGSGIQFIKHLRRES 72 (127)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTT--CE-EEEEC-------SHHHHHTTCSSS-CCSEEEEESEETTEEHHHHHHHHHTST
T ss_pred EEEEEcCCHHHHHHHHHHHHHCC--ce-EEEeC-------CHHHHHHHHhcc-CCCEEEEecCCCCCCHHHHHHHHHhCc
Confidence 46777777777777767776654 43 22222 345667666543 456777766644457889999998754
Q ss_pred --CCCCEEEEEe
Q 007482 243 --VNKPVVAWVS 252 (602)
Q Consensus 243 --~~KPVv~~k~ 252 (602)
...|||++-.
T Consensus 73 ~~~~~~ii~~s~ 84 (127)
T 2jba_A 73 MTRDIPVVMLTA 84 (127)
T ss_dssp TTTTSCEEEEEE
T ss_pred ccCCCCEEEEeC
Confidence 5679888843
No 426
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=28.30 E-value=1.8e+02 Score=28.61 Aligned_cols=25 Identities=12% Similarity=0.145 Sum_probs=16.0
Q ss_pred CcEEEEeeCCcH----HHHHHHhcCCeEEE
Q 007482 10 TTQALFYNYKQL----PIQRMLDFDFLCVA 35 (602)
Q Consensus 10 ~s~avv~g~~~~----~~~~~~~~g~~~V~ 35 (602)
+++.|. |.+|. +++.|++.|++++.
T Consensus 3 ~~vlVt-GatG~iG~~l~~~L~~~g~~V~~ 31 (348)
T 1ek6_A 3 EKVLVT-GGAGYIGSHTVLELLEAGYLPVV 31 (348)
T ss_dssp SEEEEE-TTTSHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEE-CCCCHHHHHHHHHHHHCCCEEEE
Confidence 345555 54443 77888888998653
No 427
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=28.17 E-value=1.6e+02 Score=29.17 Aligned_cols=27 Identities=11% Similarity=0.144 Sum_probs=17.2
Q ss_pred CCCcEEEEeeCCcH----HHHHHHhcCCeEEE
Q 007482 8 SKTTQALFYNYKQL----PIQRMLDFDFLCVA 35 (602)
Q Consensus 8 ~p~s~avv~g~~~~----~~~~~~~~g~~~V~ 35 (602)
+.+++.|. |.+|. +++.|++.|++++.
T Consensus 26 ~~~~vlVt-GatG~iG~~l~~~L~~~g~~V~~ 56 (352)
T 1sb8_A 26 QPKVWLIT-GVAGFIGSNLLETLLKLDQKVVG 56 (352)
T ss_dssp SCCEEEEE-TTTSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCeEEEE-CCCcHHHHHHHHHHHHCCCEEEE
Confidence 34455555 54443 77888889998653
No 428
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=28.13 E-value=2.5e+02 Score=27.22 Aligned_cols=27 Identities=4% Similarity=0.094 Sum_probs=17.0
Q ss_pred CCCCcEEEEeeCCcH----HHHHHHhcCCeEE
Q 007482 7 FSKTTQALFYNYKQL----PIQRMLDFDFLCV 34 (602)
Q Consensus 7 ~~p~s~avv~g~~~~----~~~~~~~~g~~~V 34 (602)
+..+++.|. |.+|. +++.|++.|++++
T Consensus 9 ~~~~~vlVT-GatG~iG~~l~~~L~~~g~~V~ 39 (342)
T 1y1p_A 9 PEGSLVLVT-GANGFVASHVVEQLLEHGYKVR 39 (342)
T ss_dssp CTTCEEEEE-TTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEE-CCccHHHHHHHHHHHHCCCEEE
Confidence 333445544 54443 7788888999865
No 429
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=28.10 E-value=2.3e+02 Score=22.69 Aligned_cols=114 Identities=16% Similarity=0.181 Sum_probs=68.5
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhc-
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG- 241 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~- 241 (602)
+|-+|...-.....+...+.+. |+..+... .+..+.++++.+. ...+|++-++....++.++++.+|+.
T Consensus 6 ~ilivdd~~~~~~~l~~~l~~~--~~~~v~~~-------~~~~~a~~~~~~~-~~dlvi~D~~l~~~~g~~l~~~l~~~~ 75 (128)
T 1jbe_A 6 KFLVVDDFSTMRRIVRNLLKEL--GFNNVEEA-------EDGVDALNKLQAG-GYGFVISDWNMPNMDGLELLKTIRAXX 75 (128)
T ss_dssp CEEEECSCHHHHHHHHHHHHHT--TCCCEEEE-------SSHHHHHHHHTTC-CCCEEEEESCCSSSCHHHHHHHHHC--
T ss_pred EEEEECCCHHHHHHHHHHHHHc--CCcEEEee-------CCHHHHHHHHHhc-CCCEEEEeCCCCCCCHHHHHHHHHhhc
Confidence 5788888877777776666654 44222222 2345777777654 35777776664445788999999873
Q ss_pred -CCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHh
Q 007482 242 -KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEK 310 (602)
Q Consensus 242 -~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~ 310 (602)
....|||++- +.... ..... .-++|+ ...-+.++|...++.+..+
T Consensus 76 ~~~~~~ii~~s-~~~~~----------------------~~~~~-~~~~ga~~~l~KP~~~~~l~~~i~~~~~~ 125 (128)
T 1jbe_A 76 AMSALPVLMVT-AEAKK----------------------ENIIA-AAQAGASGYVVKPFTAATLEEKLNKIFEK 125 (128)
T ss_dssp CCTTCCEEEEE-SSCCH----------------------HHHHH-HHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEe-cCccH----------------------HHHHH-HHHhCcCceeecCCCHHHHHHHHHHHHHH
Confidence 2467888873 22111 11222 234554 3456888888888776644
No 430
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=28.00 E-value=73 Score=30.87 Aligned_cols=16 Identities=38% Similarity=0.368 Sum_probs=12.8
Q ss_pred CCCCEEEEEeCcCccC
Q 007482 243 VNKPVVAWVSGTCARL 258 (602)
Q Consensus 243 ~~KPVv~~k~Gr~~~g 258 (602)
..||||+..-|..-.|
T Consensus 93 ~~kPvIAav~G~a~Gg 108 (253)
T 1uiy_A 93 YPKPTVAAVNGPAVAG 108 (253)
T ss_dssp CSSCEEEEECSCEETH
T ss_pred CCCCEEEEECCeeeHH
Confidence 7899999998866543
No 431
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=27.98 E-value=76 Score=30.99 Aligned_cols=54 Identities=19% Similarity=0.226 Sum_probs=35.1
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-------------CcH---HHH----HHHHHhcC-CCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG-------------RDE---YSL----VEALKQGK-VNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~-------------~~~---~~f----~~~~r~~~-~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++-.+ |- .++ +++ .+..++.. ..||||+..-|..-.|
T Consensus 48 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GG 122 (257)
T 1szo_A 48 LAYCFHDIACDRENKVVILTGT-GPSFCNEIDFTSFNLGTPHDWDEIIFEGQRLLNNLLSIEVPVIAAVNGPVTNA 122 (257)
T ss_dssp HHHHHHHHHHCTTCCEEEEECB-TTBSBCEECGGGSCCSSHHHHHHHHHHHHHHHHHHHHCCSCEEEEECSCBCSS
T ss_pred HHHHHHHHHhCCCceEEEEEcC-CCccccCcCchhhhcCCHHHHHHHHHHHHHHHHHHHcCCCcEEEEECCchHHH
Confidence 4567777888999999999887 51 011 122 22333332 7899999998877634
No 432
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=27.86 E-value=2.9e+02 Score=26.87 Aligned_cols=111 Identities=7% Similarity=0.018 Sum_probs=59.0
Q ss_pred CHHHHHHHHHHHHhCCCeeEcCCcccccccCcccccccCCcccccccccCCCCCcEEEEecC---hh----HHHHHHHHH
Q 007482 109 PEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKS---GG----MSNELYNTI 181 (602)
Q Consensus 109 ~E~~~~~l~~~a~~~g~riiGPNc~G~~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQS---G~----l~~~~~~~~ 181 (602)
+|+..+++.++|++.|=+ ||...- . .-+...|+++..+ .. +...+-..+
T Consensus 15 s~~tr~rV~~aa~elgY~---pn~~Ar-~--------------------~~~~~~Igvi~~~~~~~~~~~~~~~gi~~~a 70 (342)
T 1jx6_A 15 FPEQRNLTNALSEAVRAQ---PVPLSK-P--------------------TQRPIKISVVYPGQQVSDYWVRNIASFEKRL 70 (342)
T ss_dssp CHHHHHHHHHHHHHHHSC---CCCCSS-C--------------------CSSCEEEEEEECCCSSCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCC---CCcccc-c--------------------cCCceEEEEEecCCcccHHHHHHHHHHHHHH
Confidence 455678899999997654 543211 0 0133456766543 22 333444556
Q ss_pred HhcCCceeEEe-eccCCCCCCC-CHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcCCCCCEEEE
Q 007482 182 ARVTDGIYEGI-AIGGDVFPGS-TLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAW 250 (602)
Q Consensus 182 ~~~g~G~s~~v-s~Gn~~~~dv-~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~~~KPVv~~ 250 (602)
.+.|..+...+ .+.++. |. ...+.++.+.+ .++..|++... .......++.+++ .++|+|++
T Consensus 71 ~~~g~~~~~~~~~~~~~~--~~~~~~~~i~~l~~-~~vdgiIi~~~--~~~~~~~~~~~~~--~~ip~V~~ 134 (342)
T 1jx6_A 71 YKLNINYQLNQVFTRPNA--DIKQQSLSLMEALK-SKSDYLIFTLD--TTRHRKFVEHVLD--STNTKLIL 134 (342)
T ss_dssp HHTTCCEEEEEEECCTTC--CHHHHHHHHHHHHH-TTCSEEEECCS--SSTTHHHHHHHHH--HCSCEEEE
T ss_pred HHcCCeEEEEecCCCCcc--CHHHHHHHHHHHHh-cCCCEEEEeCC--hHhHHHHHHHHHH--cCCCEEEE
Confidence 66676554443 233111 22 24466777665 35888887322 2222344444443 47898877
No 433
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=27.81 E-value=1.3e+02 Score=29.82 Aligned_cols=74 Identities=12% Similarity=0.130 Sum_probs=43.6
Q ss_pred ccccCCHHHHhhcCCCccEEEEecCCh----hhHHHHHHHhhCCCCcEEEEecC----C--CCHHHHHHHHHHHHhCCCe
Q 007482 57 IPVHSTVEAACAAHPMADVFINFSSFR----SAAASSMAALKQPTIRVVAIIAE----G--VPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 57 ~~~y~sv~~i~~~~p~vDlavi~vp~~----~~~~~~~e~~~~~gv~~~viis~----G--f~E~~~~~l~~~a~~~g~r 126 (602)
-|+|.+..++....+ .++..+.+... ..++++.+.+. .+++.+++.+- | ++....++|.++|+++|+.
T Consensus 112 ~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~ 189 (375)
T 3op7_A 112 YPTYQQLYDIPKSLG-AEVDLWQIEEENGWLPDLEKLRQLIR-PTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAY 189 (375)
T ss_dssp ESSCTHHHHHHHHTT-CEEEEEEEEGGGTTEECHHHHHHHCC-TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCE
T ss_pred CCCchhHHHHHHHcC-CEEEEEeccccCCCCCCHHHHHHhhc-cCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCE
Confidence 466666666554332 45554444321 13445444454 67887766532 3 3444689999999999998
Q ss_pred eEcCCc
Q 007482 127 VIGPAT 132 (602)
Q Consensus 127 iiGPNc 132 (602)
++==++
T Consensus 190 li~De~ 195 (375)
T 3op7_A 190 ILSDEV 195 (375)
T ss_dssp EEEECC
T ss_pred EEEEcc
Confidence 774333
No 434
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=27.68 E-value=46 Score=32.68 Aligned_cols=54 Identities=24% Similarity=0.320 Sum_probs=34.9
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----------C--------cH---HHH----HHHHHhc-CCCCCEEEEEeCcCc
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG-----------R--------DE---YSL----VEALKQG-KVNKPVVAWVSGTCA 256 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~-----------~--------~~---~~f----~~~~r~~-~~~KPVv~~k~Gr~~ 256 (602)
+.+.++.+.+||++|+|++-.+ |- . +. +++ .+..++. ...||||+..-|..-
T Consensus 38 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 116 (263)
T 3l3s_A 38 LHDALRRAMGDDHVHVLVIHGP-GRIFCAGHDLKEIGRHRADPDEGRAFVTDLFEACSALMLDLAHCPKPTIALVEGIAT 116 (263)
T ss_dssp HHHHHHHHHTCTTCCEEEEECC-SSEEECCSCSCCCCC-----CCSHHHHHHHHHHHHHHHHHHHTCSSCEEEEESSEEE
T ss_pred HHHHHHHHHhCCCceEEEEECC-CCCccCCcChHHHhhccccccccHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEE
Confidence 4577788888999999998776 41 0 11 122 2233333 378999999988765
Q ss_pred cC
Q 007482 257 RL 258 (602)
Q Consensus 257 ~g 258 (602)
.|
T Consensus 117 Gg 118 (263)
T 3l3s_A 117 AA 118 (263)
T ss_dssp TH
T ss_pred HH
Confidence 44
No 435
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=27.66 E-value=2.1e+02 Score=23.36 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=68.2
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|-+|.-.-.....+...+.+.| +. ++... +..+.++++.+. ...+|++=++....++.++++.+++..
T Consensus 5 ~Ilivdd~~~~~~~l~~~L~~~g--~~-v~~~~-------~~~~al~~~~~~-~~dlvl~D~~l~~~~g~~~~~~l~~~~ 73 (132)
T 3crn_A 5 RILIVDDDTAILDSTKQILEFEG--YE-VEIAA-------TAGEGLAKIENE-FFNLALFXIKLPDMEGTELLEKAHKLR 73 (132)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTT--CE-EEEES-------SHHHHHHHHHHS-CCSEEEECSBCSSSBHHHHHHHHHHHC
T ss_pred EEEEEeCCHHHHHHHHHHHHHCC--ce-EEEeC-------CHHHHHHHHhcC-CCCEEEEecCCCCCchHHHHHHHHhhC
Confidence 57777777777777766666544 42 22222 244777777654 346777666644457889999998765
Q ss_pred CCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHH
Q 007482 243 VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFE 309 (602)
Q Consensus 243 ~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~ 309 (602)
...|||++- +.... ..... .-++|+ ...-+.++|...++.+..
T Consensus 74 ~~~~ii~~s-~~~~~----------------------~~~~~-~~~~ga~~~l~KP~~~~~L~~~i~~~~~ 120 (132)
T 3crn_A 74 PGMKKIMVT-GYASL----------------------ENSVF-SLNAGADAYIMKPVNPRDLLEKIKEKLD 120 (132)
T ss_dssp TTSEEEEEE-SCCCH----------------------HHHHH-HHHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEe-ccccH----------------------HHHHH-HHhccchhhccCCCCHHHHHHHHHHHHh
Confidence 667887773 22221 11122 234564 345688898888876654
No 436
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=27.65 E-value=2.4e+02 Score=22.74 Aligned_cols=115 Identities=17% Similarity=0.193 Sum_probs=71.7
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHh
Q 007482 161 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 240 (602)
Q Consensus 161 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~ 240 (602)
+-+|-+|.........+...+.+.|.-+ ... .+..+.++.+.+. ...+|++-......++..+++.+|+
T Consensus 6 ~~~ilivdd~~~~~~~l~~~L~~~g~~v---~~~-------~~~~~a~~~l~~~-~~dlii~d~~l~~~~g~~~~~~l~~ 74 (132)
T 3lte_A 6 SKRILVVDDDQAMAAAIERVLKRDHWQV---EIA-------HNGFDAGIKLSTF-EPAIMTLDLSMPKLDGLDVIRSLRQ 74 (132)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHTTCEE---EEE-------SSHHHHHHHHHHT-CCSEEEEESCBTTBCHHHHHHHHHT
T ss_pred CccEEEEECCHHHHHHHHHHHHHCCcEE---EEe-------CCHHHHHHHHHhc-CCCEEEEecCCCCCCHHHHHHHHHh
Confidence 4478999999988888888887755432 222 2345777777654 3467777766555678899999998
Q ss_pred cC-CCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHh
Q 007482 241 GK-VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEK 310 (602)
Q Consensus 241 ~~-~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~ 310 (602)
.. ...|+|++-++... ..... ..++|+ ...-+.++|...++.....
T Consensus 75 ~~~~~~~~ii~~~~~~~-----------------------~~~~~-~~~~g~~~~l~kP~~~~~l~~~i~~~~~~ 125 (132)
T 3lte_A 75 NKVANQPKILVVSGLDK-----------------------AKLQQ-AVTEGADDYLEKPFDNDALLDRIHDLVNE 125 (132)
T ss_dssp TTCSSCCEEEEECCSCS-----------------------HHHHH-HHHHTCCEEECSSCCHHHHHHHHHHHHC-
T ss_pred cCccCCCeEEEEeCCCh-----------------------HHHHH-HHHhChHHHhhCCCCHHHHHHHHHHHcCC
Confidence 65 25566666543222 21222 334565 3456788888887766543
No 437
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=27.62 E-value=2.3e+02 Score=26.74 Aligned_cols=115 Identities=11% Similarity=0.139 Sum_probs=77.2
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHh
Q 007482 161 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 240 (602)
Q Consensus 161 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~ 240 (602)
+-+|-+|--+-.....+...+.+.|.- +....|. .+.++++.+.+ ..+|++-++....++.++++.+|+
T Consensus 129 ~~~ILivdd~~~~~~~l~~~L~~~g~~---v~~a~~~-------~eal~~l~~~~-~dlvl~D~~mp~~~G~~l~~~ir~ 197 (254)
T 2ayx_A 129 DMMILVVDDHPINRRLLADQLGSLGYQ---CKTANDG-------VDALNVLSKNH-IDIVLSDVNMPNMDGYRLTQRIRQ 197 (254)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHHTSE---EEEECCS-------HHHHHHHHHSC-CSEEEEEESSCSSCCHHHHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCE---EEEECCH-------HHHHHHHHhCC-CCEEEEcCCCCCCCHHHHHHHHHh
Confidence 446999999998888887777765542 3333333 37778877654 688888888555688899999988
Q ss_pred cCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHh
Q 007482 241 GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEK 310 (602)
Q Consensus 241 ~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~ 310 (602)
.....|||++-+. ... . ...-+.++|+ .-.-+.++|...++.+..+
T Consensus 198 ~~~~~piI~lt~~-~~~----------------------~-~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~~~~ 247 (254)
T 2ayx_A 198 LGLTLPVIGVTAN-ALA----------------------E-EKQRCLESGMDSCLSKPVTLDVIKQTLTLYAER 247 (254)
T ss_dssp HHCCSCEEEEESS-TTS----------------------H-HHHHHHHCCCEEEEESSCCHHHHHHHHHHHHHH
T ss_pred cCCCCcEEEEECC-CCH----------------------H-HHHHHHHcCCceEEECCCCHHHHHHHHHHHHHH
Confidence 6567899988322 111 1 1233446665 3456788888888776654
No 438
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=27.35 E-value=49 Score=31.43 Aligned_cols=63 Identities=14% Similarity=0.299 Sum_probs=44.0
Q ss_pred EeeccCCCCCCC----CHHHHHHHhhcCCCccEEEEEEe-cCCC--cHHHHHHHHHhcCCCCCEEEEEeCcCcc
Q 007482 191 GIAIGGDVFPGS----TLSDHILRFNNIPQVKMMVVLGE-LGGR--DEYSLVEALKQGKVNKPVVAWVSGTCAR 257 (602)
Q Consensus 191 ~vs~Gn~~~~dv----~~~d~l~~l~~Dp~t~~I~ly~E-~g~~--~~~~f~~~~r~~~~~KPVv~~k~Gr~~~ 257 (602)
+|.+++.. +- .+..-|.++.+|+..+.|.+|+. +|+. .+....+.++. .++||+++..|...+
T Consensus 29 iI~l~g~I--~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG~v~~~~~I~~~i~~--~~~~V~t~~~G~AaS 98 (203)
T 3qwd_A 29 IIMLGSQI--DDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQH--IKPDVQTICIGMAAS 98 (203)
T ss_dssp EEEECSCB--CHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHH--SSSCEEEEEEEEEET
T ss_pred EEEEcCEE--CHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHH--hcCCcEEEEeeeehh
Confidence 66777765 32 23455677788888999999999 3432 24566677776 468999999886554
No 439
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=27.33 E-value=95 Score=32.41 Aligned_cols=52 Identities=17% Similarity=0.104 Sum_probs=39.0
Q ss_pred CccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCCCCHH---HHHHHHHHHHhCCCeeE
Q 007482 72 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEA---DTKQLIAYARSNNKVVI 128 (602)
Q Consensus 72 ~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~---~~~~l~~~a~~~g~rii 128 (602)
++|+++++++...-...++++++ +|- .+. ++.- |+ .-+.+.+.|+++|.+|+
T Consensus 85 ~~D~Vv~AivG~aGL~ptlaAi~-aGK-~va-LANK--EsLV~aG~li~~~a~~~g~~ll 139 (376)
T 3a06_A 85 KPDITMVAVSGFSGLRAVLASLE-HSK-RVC-LANK--ESLVCGGFLVKKKLKEKGTELI 139 (376)
T ss_dssp CCSEEEECCCSTTHHHHHHHHHH-HCS-EEE-ECCS--HHHHHHHHHHHHHHHHHCCEEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHH-CCC-EEE-EeCh--HHHHhhHHHHHHHHHHcCCEEE
Confidence 58999999999887888999887 573 333 3443 65 34667888999998874
No 440
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=27.19 E-value=1.4e+02 Score=29.79 Aligned_cols=72 Identities=13% Similarity=0.125 Sum_probs=41.6
Q ss_pred ecccccCCHHHHhhcCCCccEEEEecCCh----hhHHHHHHHhhCCCCcEEEEec----CC--CCHHHHHHHHHHHHhCC
Q 007482 55 IAIPVHSTVEAACAAHPMADVFINFSSFR----SAAASSMAALKQPTIRVVAIIA----EG--VPEADTKQLIAYARSNN 124 (602)
Q Consensus 55 ~G~~~y~sv~~i~~~~p~vDlavi~vp~~----~~~~~~~e~~~~~gv~~~viis----~G--f~E~~~~~l~~~a~~~g 124 (602)
.--|+|++..+..... ..++..+.+... ..++++.+.+. .+++.+++.+ +| +++...++|.++|+++|
T Consensus 116 ~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~ 193 (389)
T 1gd9_A 116 IPTPAFVSYAPAVILA-GGKPVEVPTYEEDEFRLNVDELKKYVT-DKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHD 193 (389)
T ss_dssp EEESCCTTHHHHHHHH-TCEEEEEECCGGGTTCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTT
T ss_pred EcCCCchhHHHHHHHC-CCEEEEeccCCccCCCCCHHHHHHhcC-cCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 3346777776655432 245554443321 12444444454 5676555432 34 34557899999999999
Q ss_pred CeeE
Q 007482 125 KVVI 128 (602)
Q Consensus 125 ~rii 128 (602)
+.++
T Consensus 194 ~~li 197 (389)
T 1gd9_A 194 LIVI 197 (389)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 8776
No 441
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=27.18 E-value=2.6e+02 Score=22.87 Aligned_cols=77 Identities=12% Similarity=0.066 Sum_probs=53.2
Q ss_pred CCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHH
Q 007482 159 YRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEAL 238 (602)
Q Consensus 159 ~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~ 238 (602)
....+|-+|...-.....+...+.+.|. . +... -+..+.++.+.+.+ ..+|+ +. ..++.++++.+
T Consensus 16 ~~~~~ilivdd~~~~~~~l~~~L~~~g~--~-v~~~-------~~~~~al~~l~~~~-~dlvi--~~--~~~g~~~~~~l 80 (137)
T 2pln_A 16 RGSMRVLLIEKNSVLGGEIEKGLNVKGF--M-ADVT-------ESLEDGEYLMDIRN-YDLVM--VS--DKNALSFVSRI 80 (137)
T ss_dssp TTCSEEEEECSCHHHHHHHHHHHHHTTC--E-EEEE-------SCHHHHHHHHHHSC-CSEEE--EC--STTHHHHHHHH
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHHcCc--E-EEEe-------CCHHHHHHHHHcCC-CCEEE--Ec--CccHHHHHHHH
Confidence 3566899999999888888888877544 2 2222 23457777776643 45555 43 36788999999
Q ss_pred HhcCC-CCCEEEEE
Q 007482 239 KQGKV-NKPVVAWV 251 (602)
Q Consensus 239 r~~~~-~KPVv~~k 251 (602)
++. . ..|||++-
T Consensus 81 ~~~-~~~~~ii~ls 93 (137)
T 2pln_A 81 KEK-HSSIVVLVSS 93 (137)
T ss_dssp HHH-STTSEEEEEE
T ss_pred Hhc-CCCccEEEEe
Confidence 886 5 67888873
No 442
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=27.07 E-value=1.2e+02 Score=29.34 Aligned_cols=25 Identities=16% Similarity=0.086 Sum_probs=16.8
Q ss_pred CcEEEEee--CCcH-HHHHHHhcCCeEE
Q 007482 10 TTQALFYN--YKQL-PIQRMLDFDFLCV 34 (602)
Q Consensus 10 ~s~avv~g--~~~~-~~~~~~~~g~~~V 34 (602)
+++.|+|| .-|+ +++.|++.|+.++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~ 32 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLGHPTF 32 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCCEE
Confidence 45666653 3344 7888888998864
No 443
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=27.05 E-value=1e+02 Score=29.86 Aligned_cols=54 Identities=20% Similarity=0.242 Sum_probs=33.8
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC---------------CcHH----HHHHHHHhc-CCCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG---------------RDEY----SLVEALKQG-KVNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~---------------~~~~----~f~~~~r~~-~~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++-.+ |- .+.. .+.+..++. ...||||+..-|..-.|
T Consensus 32 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 105 (254)
T 3hrx_A 32 LYAALKEGEEDREVRALLLTGA-GRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEALSGLEKPLVVAVNGVAAGA 105 (254)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTCSBCCBCGGGTTTSCCCHHHHTHHHHHHHHHHHTCSSCEEEEECSEEETH
T ss_pred HHHHHHHHHhCCCeEEEEEeCC-CCCcccCccHHHhcccchhhHHHHHHHHHHHHHHHhCCCCEEEEECCEeeeh
Confidence 4567777888888888888776 41 1122 222233332 37899999988865443
No 444
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=26.99 E-value=1.1e+02 Score=29.73 Aligned_cols=54 Identities=19% Similarity=0.231 Sum_probs=33.0
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----CcHHHH-------------HHHHHhc-CCCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG-----RDEYSL-------------VEALKQG-KVNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~-----~~~~~f-------------~~~~r~~-~~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++++|++-.+ |- .|-..| .+..++. ...||||+..-|..-.|
T Consensus 37 L~~al~~~~~d~~vr~vVltg~-g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 109 (258)
T 4fzw_A 37 LVNELEAAATDTSISVCVITGN-ARFFAAGADLNEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGYALGA 109 (258)
T ss_dssp HHHHHHHHHTCTTCCEEEEECC-SSEEEECBCHHHHHTCCHHHHHTCSHHHHHHHHHTCCSCEEEEECSEEETH
T ss_pred HHHHHHHHhhCCCeEEEEEeCC-CCceeCCCchhhhccchhhhHHHhHHHHHHHHHHHCCCCEEEEEcCcceee
Confidence 4567777888888888888776 41 111111 1122222 36899999988865543
No 445
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=26.87 E-value=84 Score=30.66 Aligned_cols=54 Identities=22% Similarity=0.407 Sum_probs=35.5
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--------------Cc---HHHHHH----HHHhc-CCCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG--------------RD---EYSLVE----ALKQG-KVNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~--------------~~---~~~f~~----~~r~~-~~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++-.+ |- .. .+.+.+ ..++. ...||||+..-|..-.|
T Consensus 37 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 112 (261)
T 3pea_A 37 VTELIDQVEKDDNIRVVVIHGE-GRFFSAGADIKEFTSVTEAKQATELAQLGQVTFERVEKCSKPVIAAIHGAALGG 112 (261)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTCSBCCBCGGGSSTTCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETH
T ss_pred HHHHHHHHHhCCCceEEEEECC-CCceeCCcCHHHHhhcCchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehH
Confidence 4577788889999999999887 51 11 112222 22322 37899999998866543
No 446
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=26.80 E-value=84 Score=26.07 Aligned_cols=80 Identities=6% Similarity=-0.071 Sum_probs=55.5
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcC-CceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHH
Q 007482 161 PGSVGFVSKSGGMSNELYNTIARVT-DGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 239 (602)
Q Consensus 161 ~G~valvSQSG~l~~~~~~~~~~~g-~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r 239 (602)
.-+|-+|...-.....+...+.+.| .-+. .++.|.++ ++.+ ......+|++-++....++-++++.+|
T Consensus 14 ~~~ilivdd~~~~~~~l~~~L~~~g~~~v~-~~~~~~~a---------~~~l-~~~~~dlvi~D~~l~~~~g~~~~~~l~ 82 (135)
T 3snk_A 14 RKQVALFSSDPNFKRDVATRLDALAIYDVR-VSETDDFL---------KGPP-ADTRPGIVILDLGGGDLLGKPGIVEAR 82 (135)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHTSSEEEE-EECGGGGG---------GCCC-TTCCCSEEEEEEETTGGGGSTTHHHHH
T ss_pred CcEEEEEcCCHHHHHHHHHHHhhcCCeEEE-EeccHHHH---------HHHH-hccCCCEEEEeCCCCCchHHHHHHHHH
Confidence 4579999999998888888888765 4333 33444444 3333 334467888877755567788999998
Q ss_pred hcCCCCCEEEEE
Q 007482 240 QGKVNKPVVAWV 251 (602)
Q Consensus 240 ~~~~~KPVv~~k 251 (602)
+.....|||++-
T Consensus 83 ~~~~~~~ii~~s 94 (135)
T 3snk_A 83 ALWATVPLIAVS 94 (135)
T ss_dssp GGGTTCCEEEEE
T ss_pred hhCCCCcEEEEe
Confidence 866678998874
No 447
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=26.71 E-value=1.6e+02 Score=28.75 Aligned_cols=95 Identities=8% Similarity=-0.005 Sum_probs=46.5
Q ss_pred CcEEEEeeCCcH----HHHHHHhcCCeEEEEEeCCCCCC--cccccc-Ccee----ecccccCCHHHHhhcCCCccEEEE
Q 007482 10 TTQALFYNYKQL----PIQRMLDFDFLCVAGIINPGAEG--FQKLFF-GQEE----IAIPVHSTVEAACAAHPMADVFIN 78 (602)
Q Consensus 10 ~s~avv~g~~~~----~~~~~~~~g~~~V~gv~~p~~~~--~~~~~~-g~~v----~G~~~y~sv~~i~~~~p~vDlavi 78 (602)
+++.|. |.+|. +++.|++.|++++.-...+.+.. ..+.+. +..+ ..+.-..++.++.... ++|.+|-
T Consensus 4 ~~vlVt-GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vih 81 (345)
T 2z1m_A 4 KRALIT-GIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-QPDEVYN 81 (345)
T ss_dssp CEEEEE-TTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-CCSEEEE
T ss_pred CEEEEE-CCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-CCCEEEE
Confidence 455555 54443 77888889998653222121110 000000 0011 1222233445544432 2699887
Q ss_pred ecCChh-----------------hHHHHHHHhhCCCC-cEEEEecC
Q 007482 79 FSSFRS-----------------AAASSMAALKQPTI-RVVAIIAE 106 (602)
Q Consensus 79 ~vp~~~-----------------~~~~~~e~~~~~gv-~~~viis~ 106 (602)
+..... ....++++|.+.++ +.+|.+|+
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 654311 02346777776777 67777766
No 448
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=26.59 E-value=1.8e+02 Score=30.95 Aligned_cols=85 Identities=16% Similarity=0.203 Sum_probs=53.7
Q ss_pred CCCCCHHHHHHHhhcCCCccEEEEEEecCCCc-HHHHHHHHHhcC-CCCCEEEEEeCcCccCccccccccccCCcC-CCC
Q 007482 199 FPGSTLSDHILRFNNIPQVKMMVVLGELGGRD-EYSLVEALKQGK-VNKPVVAWVSGTCARLFKSEVQFGHAGAKS-GGE 275 (602)
Q Consensus 199 ~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~-~~~f~~~~r~~~-~~KPVv~~k~Gr~~~g~~~~aa~sHtgala-g~~ 275 (602)
+++.+ .++++++.+.+ .|.|++-.= |..+ +..|+++++++. +++|||.. -|+..| ... +.+
T Consensus 310 ~pG~~-~~~l~a~~~~g-~~GiVleg~-G~Gn~p~~~~~~l~~a~~~Gi~VV~~--Sqc~~G-----------~V~~~~Y 373 (435)
T 2d6f_A 310 YPGIS-PDIIKWHLDEG-YRGIVIEGT-GLGHCPDTLIPVIGEAHDMGVPVAMT--SQCLNG-----------RVNMNVY 373 (435)
T ss_dssp CTTCC-HHHHHHHHHTT-CSEEEEEEB-TTTBCCGGGHHHHHHHHHTTCCEEEE--ETTCBS-----------CCCTTSS
T ss_pred CCCCC-HHHHHHHHhCC-CCEEEEecC-CCCCcCHHHHHHHHHHHhCCCEEEEe--CCCCCC-----------ccCcccc
Confidence 34555 57888888654 887776666 5444 578888888875 78888765 333333 111 123
Q ss_pred cchHHHHHHHHHHcCCcccCCHHHHHHHH
Q 007482 276 MESAQAKNQALRDAGAVVPTSYEAFESAI 304 (602)
Q Consensus 276 ~~~a~~~~a~~~qaGvi~v~~~~el~~~~ 304 (602)
. ....+.++|++...++.---..+
T Consensus 374 ----~-~g~~l~~~GvI~~~dltpekAri 397 (435)
T 2d6f_A 374 ----S-TGRRLLQAGVIPCDDMLPEVAYV 397 (435)
T ss_dssp ----H-HHHHHHHTTCEECTTCCHHHHHH
T ss_pred ----h-hhhHHhhCCEEECCCCCHHHHHH
Confidence 2 24568889999998866433333
No 449
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=26.58 E-value=1e+02 Score=31.39 Aligned_cols=75 Identities=8% Similarity=-0.049 Sum_probs=43.0
Q ss_pred cccCCHHHHhhcCCCccEEEEecCChh---hHHHHHHHhhCCCCcEEEEecC----C--CCHHHHHHHHHHHHhCCCeeE
Q 007482 58 PVHSTVEAACAAHPMADVFINFSSFRS---AAASSMAALKQPTIRVVAIIAE----G--VPEADTKQLIAYARSNNKVVI 128 (602)
Q Consensus 58 ~~y~sv~~i~~~~p~vDlavi~vp~~~---~~~~~~e~~~~~gv~~~viis~----G--f~E~~~~~l~~~a~~~g~rii 128 (602)
|+|.+..++.... ..++..+.+.... .++++.+.+...+.+.+++.+- | ++....++|.++|+++|+.++
T Consensus 141 p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li 219 (437)
T 3g0t_A 141 PGFNLNKLQCRIL-GQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVI 219 (437)
T ss_dssp SCCHHHHHHHHHH-TCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCcHhHHHHHHHc-CCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEE
Confidence 5565555544332 1455544442111 2445555553567887766432 3 345568899999999999877
Q ss_pred cCCcc
Q 007482 129 GPATV 133 (602)
Q Consensus 129 GPNc~ 133 (602)
==++.
T Consensus 220 ~De~~ 224 (437)
T 3g0t_A 220 EDLAY 224 (437)
T ss_dssp EECTT
T ss_pred EEcch
Confidence 44443
No 450
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=26.57 E-value=4.1e+02 Score=24.99 Aligned_cols=217 Identities=11% Similarity=-0.007 Sum_probs=108.3
Q ss_pred cCCHHHHhhcCCCccEEEEecC----ChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE--cCCcc
Q 007482 60 HSTVEAACAAHPMADVFINFSS----FRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI--GPATV 133 (602)
Q Consensus 60 y~sv~~i~~~~p~vDlavi~vp----~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii--GPNc~ 133 (602)
...+++...+.+..++.+..+. ........++.+.+.++.++|+.+... ......++.+++.|+.++ +-+.-
T Consensus 28 ~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~--~~~~~~~~~~~~~~iPvV~~~~~~~ 105 (304)
T 3gbv_A 28 QKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEEQPDGVMFAPTVP--QYTKGFTDALNELGIPYIYIDSQIK 105 (304)
T ss_dssp HHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTTCCSEEEECCSSG--GGTHHHHHHHHHHTCCEEEESSCCT
T ss_pred HHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCEEEECCCCh--HHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3444444443201566665431 112224567777778999888865422 123445566677787654 32211
Q ss_pred c-----ccccCcccccccCCcccccccccCCCCCcEEEEecC-----hh-----HHHHHHHHHHhcCCceeEE--eeccC
Q 007482 134 G-----GIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKS-----GG-----MSNELYNTIARVTDGIYEG--IAIGG 196 (602)
Q Consensus 134 G-----~~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQS-----G~-----l~~~~~~~~~~~g~G~s~~--vs~Gn 196 (602)
+ .+.......+ -.....+-..-...++|++++.. +. -.....+.+.+.|+.+... .....
T Consensus 106 ~~~~~~~V~~D~~~~g---~~a~~~l~~~g~~~~~i~~i~~~~~g~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~ 182 (304)
T 3gbv_A 106 DAPPLAFFGQNSHQSG---YFAARMLMLLAVNDREIVIFRKIHEGVIGSNQQESREIGFRQYMQEHHPACNILELNLHAD 182 (304)
T ss_dssp TSCCSEEEECCHHHHH---HHHHHHHHHHSTTCSEEEEEEEEBTTBCCCHHHHHHHHHHHHHHHHHCTTSEEEEEEEESS
T ss_pred CCCceEEEecChHHHH---HHHHHHHHHHhCCCCeEEEEEecccCCccchhHHHHHHHHHHHHHhhCCCcEEEEeeecCC
Confidence 1 1111110000 00000011011234889999732 11 1223445667778776443 22333
Q ss_pred CCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcCC-CCCEEEEEeCcCccCccccccccccCCcCCCC
Q 007482 197 DVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKV-NKPVVAWVSGTCARLFKSEVQFGHAGAKSGGE 275 (602)
Q Consensus 197 ~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~~-~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~ 275 (602)
.. +.....+-++|...|+..+|+..-. . ...+++++++... ...||.+ +-+
T Consensus 183 ~~--~~~~~~~~~~l~~~~~~~ai~~~~d---~-a~g~~~al~~~g~~di~vig~--d~~-------------------- 234 (304)
T 3gbv_A 183 LN--IEDSRMLDDFFREHPDVKHGITFNS---K-VYIIGEYLQQRRKSDFSLIGY--DLL-------------------- 234 (304)
T ss_dssp CS--SCHHHHHHHHHHHCTTCCEEEESSS---C-THHHHHHHHHTTCCSCEEEEE--SCC--------------------
T ss_pred CH--HHHHHHHHHHHHhCCCeEEEEEcCc---c-hHHHHHHHHHcCCCCcEEEEe--CCC--------------------
Confidence 33 5556666777878888888766555 3 4568888887543 2222222 111
Q ss_pred cchHHHHHHHHHHcCCc---ccCCHHHHHHHHHHHHHhHhhc
Q 007482 276 MESAQAKNQALRDAGAV---VPTSYEAFESAIKETFEKLVEE 314 (602)
Q Consensus 276 ~~~a~~~~a~~~qaGvi---~v~~~~el~~~~~~~~~~~~~~ 314 (602)
......++ -|.+ ...+++++...+-.++.++...
T Consensus 235 ----~~~~~~~~-~~~~~~tv~~~~~~~g~~av~~l~~~i~~ 271 (304)
T 3gbv_A 235 ----ERNVTCLK-EGTVSFLIAQQPELQGFNSIKTLCDHLIF 271 (304)
T ss_dssp ----HHHHHHHH-HTSEEEEEECCHHHHHHHHHHHHHHHHTS
T ss_pred ----HHHHHHHH-cCceEEEEEeCHHHHHHHHHHHHHHHHhc
Confidence 11123333 3544 5677888887777666665544
No 451
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=26.52 E-value=2.1e+02 Score=28.48 Aligned_cols=29 Identities=7% Similarity=-0.174 Sum_probs=18.7
Q ss_pred CCCCcEEEEeeCCcH----HHHHHHh--cCCeEEEE
Q 007482 7 FSKTTQALFYNYKQL----PIQRMLD--FDFLCVAG 36 (602)
Q Consensus 7 ~~p~s~avv~g~~~~----~~~~~~~--~g~~~V~g 36 (602)
++.+++.|.| .+|- +++.|++ .|++++.-
T Consensus 8 ~~~~~vlVTG-atG~IG~~l~~~L~~~~~g~~V~~~ 42 (362)
T 3sxp_A 8 LENQTILITG-GAGFVGSNLAFHFQENHPKAKVVVL 42 (362)
T ss_dssp CTTCEEEEET-TTSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred cCCCEEEEEC-CCCHHHHHHHHHHHhhCCCCeEEEE
Confidence 4555666554 3333 7888888 89987533
No 452
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=26.38 E-value=1.3e+02 Score=24.33 Aligned_cols=60 Identities=18% Similarity=0.306 Sum_probs=40.6
Q ss_pred HHHHHHHHHhcC-CCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHH
Q 007482 231 EYSLVEALKQGK-VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIK 305 (602)
Q Consensus 231 ~~~f~~~~r~~~-~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~ 305 (602)
.......++... .+||+|++.-|.++-- - ..|..-.++.|+ +...+++||..-.+
T Consensus 37 sqdirdiiksmkdngkplvvfvngasqnd----------------v----nefqneakkegvsydvlkstdpeeltqrvr 96 (112)
T 2lnd_A 37 SQDIRDIIKSMKDNGKPLVVFVNGASQND----------------V----NEFQNEAKKEGVSYDVLKSTDPEELTQRVR 96 (112)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEECSCCHHH----------------H----HHHHHHHHHHTCEEEEEECCCHHHHHHHHH
T ss_pred hhhHHHHHHHHHhcCCeEEEEecCccccc----------------H----HHHHHHHHhcCcchhhhccCCHHHHHHHHH
Confidence 334444455544 7899999988866532 1 345555566665 56789999999888
Q ss_pred HHHHh
Q 007482 306 ETFEK 310 (602)
Q Consensus 306 ~~~~~ 310 (602)
.+++.
T Consensus 97 eflkt 101 (112)
T 2lnd_A 97 EFLKT 101 (112)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88764
No 453
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=26.38 E-value=1.6e+02 Score=25.45 Aligned_cols=81 Identities=10% Similarity=-0.061 Sum_probs=53.9
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHh
Q 007482 161 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 240 (602)
Q Consensus 161 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~ 240 (602)
.=+|-+|.-.-.....+...+.+.+ ++..+.... +..+.++.+.+.+ ..+|++-++....++-.+++.+|+
T Consensus 25 ~~~ILivdd~~~~~~~l~~~L~~~~-~~~~v~~~~-------~~~~al~~l~~~~-~dlvilD~~l~~~~g~~l~~~lr~ 95 (164)
T 3t8y_A 25 VIRVLVVDDSAFMRMVLKDIIDSQP-DMKVVGFAK-------DGLEAVEKAIELK-PDVITMDIEMPNLNGIEALKLIMK 95 (164)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHTST-TEEEEEEES-------SHHHHHHHHHHHC-CSEEEECSSCSSSCHHHHHHHHHH
T ss_pred ccEEEEEcCCHHHHHHHHHHHhcCC-CeEEEEecC-------CHHHHHHHhccCC-CCEEEEeCCCCCCCHHHHHHHHHh
Confidence 3479999999888887777776543 333222222 3456777765543 567777666555788999999988
Q ss_pred cCCCCCEEEEE
Q 007482 241 GKVNKPVVAWV 251 (602)
Q Consensus 241 ~~~~KPVv~~k 251 (602)
... .|||++-
T Consensus 96 ~~~-~~ii~~s 105 (164)
T 3t8y_A 96 KAP-TRVIMVS 105 (164)
T ss_dssp HSC-CEEEEEE
T ss_pred cCC-ceEEEEe
Confidence 554 7877764
No 454
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=26.31 E-value=2.9e+02 Score=23.13 Aligned_cols=113 Identities=10% Similarity=0.106 Sum_probs=73.3
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|-+|...-.....+...+.. |+. ++.. .+..+.++.+.+.....+|++-++....++-++++.+|+..
T Consensus 6 ~ILivdd~~~~~~~l~~~L~~---~~~-v~~~-------~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~ 74 (151)
T 3kcn_A 6 RILLVDDDYSLLNTLKRNLSF---DFE-VTTC-------ESGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLIS 74 (151)
T ss_dssp EEEEECSCHHHHHHHHHHHTT---TSE-EEEE-------SSHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHC
T ss_pred eEEEEeCCHHHHHHHHHHhcc---Cce-EEEe-------CCHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcC
Confidence 578888888777777666643 332 2222 24568888888764467888877755678899999999866
Q ss_pred CCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcC-C----cccCCHHHHHHHHHHHHHh
Q 007482 243 VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG-A----VVPTSYEAFESAIKETFEK 310 (602)
Q Consensus 243 ~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaG-v----i~v~~~~el~~~~~~~~~~ 310 (602)
...|||++-.. ... .....+++ .| + ...-+.++|...++.+..+
T Consensus 75 ~~~~ii~~s~~-~~~----------------------~~~~~~~~-~g~~~~~l~KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 75 PNSVYLMLTGN-QDL----------------------TTAMEAVN-EGQVFRFLNKPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp SSCEEEEEECG-GGH----------------------HHHHHHHH-HTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECC-CCH----------------------HHHHHHHH-cCCeeEEEcCCCCHHHHHHHHHHHHHH
Confidence 77788877321 111 22233333 34 3 3455888998888776643
No 455
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=26.30 E-value=3.2e+02 Score=26.79 Aligned_cols=99 Identities=14% Similarity=0.110 Sum_probs=54.4
Q ss_pred HHHHHHhcCCeEEEEEeCCCCCCccccccCceee---------cc---cccCCHHHHhhcCCCccEEEEec-CC--hhhH
Q 007482 22 PIQRMLDFDFLCVAGIINPGAEGFQKLFFGQEEI---------AI---PVHSTVEAACAAHPMADVFINFS-SF--RSAA 86 (602)
Q Consensus 22 ~~~~~~~~g~~~V~gv~~p~~~~~~~~~~g~~v~---------G~---~~y~sv~~i~~~~p~vDlavi~v-p~--~~~~ 86 (602)
.++.|.+.|-.+|--=+ |-.+ -...|..|+ |. .++.-++++-+..+++-+.+..- .+ ..-+
T Consensus 37 ~~~~l~~~GaD~iElgi-PfSD---P~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~ 112 (267)
T 3vnd_A 37 IIQTLVDNGADALELGF-PFSD---PLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGI 112 (267)
T ss_dssp HHHHHHHTTCSSEEEEC-CCSC---CTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCH
T ss_pred HHHHHHHcCCCEEEECC-CCCC---CCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhH
Confidence 67788888876532222 4111 012233442 32 34556666543311233433311 11 1123
Q ss_pred HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007482 87 ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 126 (602)
Q Consensus 87 ~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~r 126 (602)
+..+++|.+.|+..+++.- .+-+..+++++.++++|+.
T Consensus 113 e~f~~~~~~aGvdgvii~D--lp~ee~~~~~~~~~~~gl~ 150 (267)
T 3vnd_A 113 DEFYTKAQAAGVDSVLIAD--VPVEESAPFSKAAKAHGIA 150 (267)
T ss_dssp HHHHHHHHHHTCCEEEETT--SCGGGCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCCCEEEeCC--CCHhhHHHHHHHHHHcCCe
Confidence 6678899999999988743 3333467899999999976
No 456
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=26.24 E-value=3.1e+02 Score=27.38 Aligned_cols=87 Identities=9% Similarity=0.156 Sum_probs=50.8
Q ss_pred CHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcCCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHH
Q 007482 203 TLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAK 282 (602)
Q Consensus 203 ~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~ 282 (602)
++.|++ +|++..+|++... .-.+.+-..++++ .+|+|++=|+-.... +.+...
T Consensus 57 ~~~~~l----~~~~~D~V~i~tp-~~~h~~~~~~al~---~gk~vl~EKP~~~~~-------------------~~~~~l 109 (354)
T 3db2_A 57 TMEALL----AREDVEMVIITVP-NDKHAEVIEQCAR---SGKHIYVEKPISVSL-------------------DHAQRI 109 (354)
T ss_dssp SHHHHH----HCSSCCEEEECSC-TTSHHHHHHHHHH---TTCEEEEESSSCSSH-------------------HHHHHH
T ss_pred CHHHHh----cCCCCCEEEEeCC-hHHHHHHHHHHHH---cCCEEEEccCCCCCH-------------------HHHHHH
Confidence 445544 4888899888777 4444444444444 589999998743322 112455
Q ss_pred HHHHHHcCCcccCCHHHHHHHHHHHHHhHhhcCC
Q 007482 283 NQALRDAGAVVPTSYEAFESAIKETFEKLVEEGK 316 (602)
Q Consensus 283 ~a~~~qaGvi~v~~~~el~~~~~~~~~~~~~~g~ 316 (602)
.++.++.|+...-.+.--+.-.-..+++++.+|.
T Consensus 110 ~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~g~ 143 (354)
T 3db2_A 110 DQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKE 143 (354)
T ss_dssp HHHHHHHCCCEEEECGGGGSHHHHHHHHHHHTTT
T ss_pred HHHHHHcCCeEEEeechhcCHHHHHHHHHHhcCC
Confidence 5677888887655444444333334455555544
No 457
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=26.19 E-value=70 Score=31.17 Aligned_cols=54 Identities=20% Similarity=0.332 Sum_probs=33.9
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----CcHHHHHHH----------HHhcCCCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG-----RDEYSLVEA----------LKQGKVNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~-----~~~~~f~~~----------~r~~~~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++-.+ |- .|-..|.+. ..+....||||+..-|..-.|
T Consensus 39 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~kPvIAav~G~a~Gg 107 (256)
T 3trr_A 39 LAAAADQLDSSADLSVAIITGA-GGNFCAGMDLKAFVSGEAVLSERGLGFTNVPPRKPIIAAVEGFALAG 107 (256)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEG-GGCCCCCBCHHHHHHTCCCEETTEETTSSSCCSSCEEEEECSBCCTH
T ss_pred HHHHHHHHhcCCCeEEEEEECC-CCceecCcCHHHhccccchhhhhhhhHHHhcCCCCEEEEECCeeeec
Confidence 4466777778888888888777 41 133333220 122246899999998876544
No 458
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=26.16 E-value=4.3e+02 Score=25.95 Aligned_cols=134 Identities=10% Similarity=-0.030 Sum_probs=76.8
Q ss_pred cCChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCcccccccCcccccccCCcccccccccCC
Q 007482 80 SSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLY 159 (602)
Q Consensus 80 vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~~~~~~~l~~~~~~~~~~~p~~~~ 159 (602)
.|....+++.++.+.+.||...|++...+...+-+.+++..++++-|+.| ++. +
T Consensus 50 ~~~~~~~e~l~~~m~~~GI~~~Vlvq~~~~~~dN~~ll~~l~~~~~r~~G-----va~-----v---------------- 103 (303)
T 4d9a_A 50 LPRDAGPDMLFALRDHLGFARNVIVQASCHGTDNAATLDAIARAQGKARG-----IAV-----V---------------- 103 (303)
T ss_dssp CBCCBCHHHHHHHHHHHTCSEEEEECCGGGTTCCHHHHHHHHHTTTSEEE-----EEC-----C----------------
T ss_pred cCCCCCHHHHHHHHHHcCCCeEEEeccccccccHHHHHHHHHhCCCcEEE-----EEE-----e----------------
Confidence 34455678888888889999999998754433455666755566545443 220 0
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCC-ceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHH
Q 007482 160 RPGSVGFVSKSGGMSNELYNTIARVTD-GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEAL 238 (602)
Q Consensus 160 ~~G~valvSQSG~l~~~~~~~~~~~g~-G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~ 238 (602)
.|. . + -+-++.+.+.|+ |+......+... .++..++...+..=.+ .. .+.+-++..+...+.+.+
T Consensus 104 dp~-~-----~----~~eL~~l~~~G~rGvR~~~~~~~~~--~~~~~~~~~~~~~l~~-gl-~v~l~~~~~~l~~l~~~~ 169 (303)
T 4d9a_A 104 DPA-I-----D----EAELAALHEGGMRGIRFNFLKRLVD--DAPKDKFLEVAGRLPA-GW-HVVIYFEADILEELRPFM 169 (303)
T ss_dssp CTT-C-----C----HHHHHHHHHTTEEEEEEECCTTTCS--CCCHHHHHHHHTSCCT-TC-EEEEECCGGGHHHHHHHH
T ss_pred CCC-C-----C----HHHHHHHHHCCCCEEEeecccCCcc--ccCHHHHHHHHHHHhc-CC-EEEEecccccHHHHHHHH
Confidence 010 0 0 123344555554 565555443223 4566677776665444 32 222222456777888888
Q ss_pred HhcCCCCCEEEEEeCcC
Q 007482 239 KQGKVNKPVVAWVSGTC 255 (602)
Q Consensus 239 r~~~~~KPVv~~k~Gr~ 255 (602)
++. +.+||+=-.|+-
T Consensus 170 ~~~--~~~iVidH~G~p 184 (303)
T 4d9a_A 170 DAI--PVPIVIDHMGRP 184 (303)
T ss_dssp HHC--SSCEEEGGGGCC
T ss_pred HHC--CCcEEEeCCCCC
Confidence 886 678887655553
No 459
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=26.13 E-value=1.9e+02 Score=25.97 Aligned_cols=80 Identities=16% Similarity=0.049 Sum_probs=55.3
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHh
Q 007482 161 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 240 (602)
Q Consensus 161 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~ 240 (602)
+.+|-+|.-.-.....+...+.+.| +. ++.. -+..+.++.+.+. ...+|++-+.....++-++++.+|+
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~g--~~-v~~~-------~~~~~al~~~~~~-~~dlvl~D~~lp~~~g~~~~~~l~~ 72 (208)
T 1yio_A 4 KPTVFVVDDDMSVREGLRNLLRSAG--FE-VETF-------DCASTFLEHRRPE-QHGCLVLDMRMPGMSGIELQEQLTA 72 (208)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTT--CE-EEEE-------SSHHHHHHHCCTT-SCEEEEEESCCSSSCHHHHHHHHHH
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhCC--ce-EEEc-------CCHHHHHHhhhcc-CCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 3468888888888888777777544 43 2222 2345777777554 3567777666444678999999998
Q ss_pred cCCCCCEEEEE
Q 007482 241 GKVNKPVVAWV 251 (602)
Q Consensus 241 ~~~~KPVv~~k 251 (602)
.....|||++-
T Consensus 73 ~~~~~~ii~ls 83 (208)
T 1yio_A 73 ISDGIPIVFIT 83 (208)
T ss_dssp TTCCCCEEEEE
T ss_pred cCCCCCEEEEe
Confidence 66778998884
No 460
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=25.82 E-value=1.6e+02 Score=29.11 Aligned_cols=74 Identities=9% Similarity=0.003 Sum_probs=42.5
Q ss_pred ccccCCHHHHhhcCCCccEEEEecCChhhHHHHHHHhhCCCCcEEEEecC----C--CCHHHHHHHHHHHHhCCCeeEcC
Q 007482 57 IPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAE----G--VPEADTKQLIAYARSNNKVVIGP 130 (602)
Q Consensus 57 ~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~----G--f~E~~~~~l~~~a~~~g~riiGP 130 (602)
-|+|++..+..... ..++..+.+.....++++.+.+. .+.+.+++.+. | ++....++|.++|+++|+.++==
T Consensus 112 ~~~~~~~~~~~~~~-g~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~D 189 (377)
T 3fdb_A 112 TPAYPPFFHLLSAT-QREGIFIDATGGINLHDVEKGFQ-AGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVD 189 (377)
T ss_dssp ESCCTHHHHHHHHH-TCCEEEEECTTSCCHHHHHHHHH-TTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcHhHHHHHHHc-CCEEEEccCCCCCCHHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 35666655544332 24555444432223455555555 46776666543 3 34446889999999999987733
Q ss_pred Cc
Q 007482 131 AT 132 (602)
Q Consensus 131 Nc 132 (602)
++
T Consensus 190 e~ 191 (377)
T 3fdb_A 190 EI 191 (377)
T ss_dssp CT
T ss_pred cc
Confidence 33
No 461
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=25.76 E-value=1.9e+02 Score=27.13 Aligned_cols=24 Identities=4% Similarity=-0.135 Sum_probs=16.0
Q ss_pred cEEEEeeCCcH----HHHHHHhcCCeEE
Q 007482 11 TQALFYNYKQL----PIQRMLDFDFLCV 34 (602)
Q Consensus 11 s~avv~g~~~~----~~~~~~~~g~~~V 34 (602)
.+++|.|.++- +++.|.+.|++++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~ 29 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIV 29 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEE
Confidence 34555554433 7788888999864
No 462
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=25.51 E-value=75 Score=31.10 Aligned_cols=54 Identities=24% Similarity=0.272 Sum_probs=34.4
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----CcHHHH-------------HHHHHhc-CCCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG-----RDEYSL-------------VEALKQG-KVNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~-----~~~~~f-------------~~~~r~~-~~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++..+ |- .|-..| .+..++. ...||||+..-|..-.|
T Consensus 42 l~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 114 (263)
T 3moy_A 42 VLDAARDFDADLEIGAIVVTGS-ERAFAAGADIAEMVTLTPHQARERNLLSGWDSLTQVRKPIVAAVAGYALGG 114 (263)
T ss_dssp HHHHHHHHHHCTTCCEEEEECC-SSEEEESBCHHHHTTCCHHHHHHTTTTHHHHHHTTCCSCEEEEECBEEETH
T ss_pred HHHHHHHHhcCCCceEEEEECC-CCCeeCCcChHHHhccCchhHHHHHHHHHHHHHHhCCCCEEEEECCEeehH
Confidence 4577778888999999998776 41 121111 1122333 37899999988866543
No 463
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=25.47 E-value=55 Score=32.06 Aligned_cols=54 Identities=17% Similarity=0.276 Sum_probs=32.3
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--CcH------------------HH-HHHHH-HhcCCCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG--RDE------------------YS-LVEAL-KQGKVNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~--~~~------------------~~-f~~~~-r~~~~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++..+ |- ..| .+ ++..+ +.....||||+..-|..-.|
T Consensus 41 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~kPvIAav~G~a~Gg 116 (265)
T 3rsi_A 41 FAAAWDEIDHDDGIRAAILTGA-GSAYCVGGDLSDGWMVRDGSAPPLDPATIGKGLLLSHTLTKPLIAAVNGACLGG 116 (265)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTCSEECC--------------CCCHHHHHHHTTSSCCCSSCEEEEECSCEETH
T ss_pred HHHHHHHHHhCCCceEEEEECC-CCCcccCcCCCcccccchHHHHHHhHHHHHHHHHHhcCCCCCEEEEECCeeeHH
Confidence 3456666777778888877776 41 000 11 33333 21147899999998876544
No 464
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=25.47 E-value=1e+02 Score=31.35 Aligned_cols=36 Identities=3% Similarity=-0.032 Sum_probs=26.4
Q ss_pred CccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCCCC
Q 007482 72 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 109 (602)
Q Consensus 72 ~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~ 109 (602)
++|+++.++|... .....+.+.++|+| +|.+|+-|.
T Consensus 68 ~~DvV~~a~g~~~-s~~~a~~~~~aG~k-vId~Sa~~r 103 (340)
T 2hjs_A 68 SVGLAFFAAAAEV-SRAHAERARAAGCS-VIDLSGALE 103 (340)
T ss_dssp GCSEEEECSCHHH-HHHHHHHHHHTTCE-EEETTCTTT
T ss_pred CCCEEEEcCCcHH-HHHHHHHHHHCCCE-EEEeCCCCC
Confidence 3899999998753 45566667678998 676777664
No 465
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=25.46 E-value=2.8e+02 Score=25.14 Aligned_cols=117 Identities=15% Similarity=0.081 Sum_probs=73.6
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhc
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 241 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~ 241 (602)
-+|-+|...-.+...+...+.+.| +. ++.. .+..+.++.+.+. ...+|++-+.....++-++++.+|+.
T Consensus 8 ~~ilivdd~~~~~~~l~~~L~~~g--~~-v~~~-------~~~~~a~~~~~~~-~~dlvllD~~l~~~~g~~~~~~l~~~ 76 (233)
T 1ys7_A 8 PRVLVVDDDSDVLASLERGLRLSG--FE-VATA-------VDGAEALRSATEN-RPDAIVLDINMPVLDGVSVVTALRAM 76 (233)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTT--CE-EEEE-------SSHHHHHHHHHHS-CCSEEEEESSCSSSCHHHHHHHHHHT
T ss_pred CeEEEEeCCHHHHHHHHHHHHhCC--CE-EEEE-------CCHHHHHHHHHhC-CCCEEEEeCCCCCCCHHHHHHHHHhc
Confidence 368899999888888877777654 42 2222 2355777777654 35677777664446788999999986
Q ss_pred CCCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcC-CcccCCHHHHHHHHHHHHHh
Q 007482 242 KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG-AVVPTSYEAFESAIKETFEK 310 (602)
Q Consensus 242 ~~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaG-vi~v~~~~el~~~~~~~~~~ 310 (602)
....|||++-.-....- ....-..| .+ | +....+.++|...++.+..+
T Consensus 77 ~~~~~ii~lt~~~~~~~---~~~~~~~g----a~--------------~~l~Kp~~~~~L~~~i~~~~~~ 125 (233)
T 1ys7_A 77 DNDVPVCVLSARSSVDD---RVAGLEAG----AD--------------DYLVKPFVLAELVARVKALLRR 125 (233)
T ss_dssp TCCCCEEEEECCCTTTC---CCTTTTTT----CS--------------EEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCHHH---HHHHHHcC----CC--------------EEEeCCCCHHHHHHHHHHHHhh
Confidence 67789988853322221 11111111 11 1 23456889999888877755
No 466
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=25.44 E-value=1e+02 Score=28.26 Aligned_cols=23 Identities=4% Similarity=-0.102 Sum_probs=15.7
Q ss_pred cEEEEeeCCcH----HHHHHHhcCCeEE
Q 007482 11 TQALFYNYKQL----PIQRMLDFDFLCV 34 (602)
Q Consensus 11 s~avv~g~~~~----~~~~~~~~g~~~V 34 (602)
++.|. |.+|. +++.|++.|++++
T Consensus 2 kilVt-GatG~iG~~l~~~L~~~g~~V~ 28 (224)
T 3h2s_A 2 KIAVL-GATGRAGSAIVAEARRRGHEVL 28 (224)
T ss_dssp EEEEE-TTTSHHHHHHHHHHHHTTCEEE
T ss_pred EEEEE-cCCCHHHHHHHHHHHHCCCEEE
Confidence 45555 54443 7888888999864
No 467
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=25.18 E-value=1.8e+02 Score=29.02 Aligned_cols=96 Identities=11% Similarity=0.044 Sum_probs=48.0
Q ss_pred CCCCCCcEEEEeeCCcH----HHHHHHhc-CC-eEEEEEeCCCCCCc---cccccCce----eecccccCCHHHHhhcCC
Q 007482 5 QLFSKTTQALFYNYKQL----PIQRMLDF-DF-LCVAGIINPGAEGF---QKLFFGQE----EIAIPVHSTVEAACAAHP 71 (602)
Q Consensus 5 ~l~~p~s~avv~g~~~~----~~~~~~~~-g~-~~V~gv~~p~~~~~---~~~~~g~~----v~G~~~y~sv~~i~~~~p 71 (602)
..|+-+++.|.| .+|. +++.|++. |+ +++ ++. -..... .+.+.... ...+.-..++.++..
T Consensus 17 ~~~~~k~vlVTG-atG~iG~~l~~~L~~~~g~~~V~-~~~-r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--- 90 (344)
T 2gn4_A 17 NMLDNQTILITG-GTGSFGKCFVRKVLDTTNAKKII-VYS-RDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE--- 90 (344)
T ss_dssp CTTTTCEEEEET-TTSHHHHHHHHHHHHHCCCSEEE-EEE-SCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT---
T ss_pred HhhCCCEEEEEC-CCcHHHHHHHHHHHhhCCCCEEE-EEE-CChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh---
Confidence 345656666664 4333 77888887 87 653 333 111000 00000001 112333344555443
Q ss_pred CccEEEEecCChhh-----------------HHHHHHHhhCCCCcEEEEecC
Q 007482 72 MADVFINFSSFRSA-----------------AASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 72 ~vDlavi~vp~~~~-----------------~~~~~e~~~~~gv~~~viis~ 106 (602)
++|.+|-+...... ...++++|.+.|++.+|.+|+
T Consensus 91 ~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 91 GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 37887766543210 124667777778888887776
No 468
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=25.17 E-value=45 Score=32.62 Aligned_cols=16 Identities=25% Similarity=0.397 Sum_probs=12.7
Q ss_pred CCCCEEEEEeCcCccC
Q 007482 243 VNKPVVAWVSGTCARL 258 (602)
Q Consensus 243 ~~KPVv~~k~Gr~~~g 258 (602)
..||||+..-|..-.|
T Consensus 95 ~~kPvIAav~G~a~Gg 110 (261)
T 1ef8_A 95 FPKPIISMVEGSVWGG 110 (261)
T ss_dssp CSSCEEEEECSEEETH
T ss_pred CCCCEEEEECCEEEeH
Confidence 6899999988866544
No 469
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=25.14 E-value=95 Score=35.31 Aligned_cols=57 Identities=19% Similarity=0.141 Sum_probs=36.2
Q ss_pred CccEEEEecCCh---hhHHHHHHHhhCCCCcEEEEecCC-CCHHHHHHHHHHHHhCCC-eeEcCCc
Q 007482 72 MADVFINFSSFR---SAAASSMAALKQPTIRVVAIIAEG-VPEADTKQLIAYARSNNK-VVIGPAT 132 (602)
Q Consensus 72 ~vDlavi~vp~~---~~~~~~~e~~~~~gv~~~viis~G-f~E~~~~~l~~~a~~~g~-riiGPNc 132 (602)
++|++.++.-.. ...+.+++++.++|.+.+.|+.+| .+..+.+ .+++.|+ .+.+|.+
T Consensus 647 ~adiVglSsl~~~~~~~~~~vi~~L~~~G~~~i~VivGG~~p~~d~~----~l~~~GaD~~f~~gt 708 (727)
T 1req_A 647 DVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILITVGGVIPEQDFD----ELRKDGAVEIYTPGT 708 (727)
T ss_dssp TCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEESCCGGGHH----HHHHTTEEEEECTTC
T ss_pred CCCEEEEeeecHhHHHHHHHHHHHHHhcCCCCCEEEEcCCCccccHH----HHHhCCCCEEEcCCc
Confidence 478888876332 234667888888888667777777 4443332 3466777 4677654
No 470
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=24.94 E-value=1.9e+02 Score=28.82 Aligned_cols=26 Identities=12% Similarity=0.230 Sum_probs=16.6
Q ss_pred CCCcEEEEeeCCcH----HHHHHHhc-CCeEE
Q 007482 8 SKTTQALFYNYKQL----PIQRMLDF-DFLCV 34 (602)
Q Consensus 8 ~p~s~avv~g~~~~----~~~~~~~~-g~~~V 34 (602)
..+++.|. |.+|. +++.|++. |++++
T Consensus 23 ~~~~vlVt-GatG~iG~~l~~~L~~~~g~~V~ 53 (372)
T 3slg_A 23 KAKKVLIL-GVNGFIGHHLSKRILETTDWEVF 53 (372)
T ss_dssp CCCEEEEE-SCSSHHHHHHHHHHHHHSSCEEE
T ss_pred CCCEEEEE-CCCChHHHHHHHHHHhCCCCEEE
Confidence 34555655 44433 77888887 89865
No 471
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=24.79 E-value=4.4e+02 Score=25.61 Aligned_cols=24 Identities=4% Similarity=0.007 Sum_probs=15.1
Q ss_pred cEEEEeeCCcH----HHHHHHhc--CCeEE
Q 007482 11 TQALFYNYKQL----PIQRMLDF--DFLCV 34 (602)
Q Consensus 11 s~avv~g~~~~----~~~~~~~~--g~~~V 34 (602)
.+++|.|.+|. +++.|++. |++++
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~ 34 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVT 34 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEE
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEE
Confidence 34555555444 77778876 78864
No 472
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=24.78 E-value=76 Score=31.31 Aligned_cols=54 Identities=20% Similarity=0.362 Sum_probs=34.2
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCC-------------------c-HHHH----HHHHHhcC-CCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGGR-------------------D-EYSL----VEALKQGK-VNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~~-------------------~-~~~f----~~~~r~~~-~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++-.+ |-. + ...+ -+..++.. ..||||+..-|..-.|
T Consensus 47 L~~al~~~~~d~~vr~vVltg~-G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAav~G~a~Gg 125 (274)
T 4fzw_C 47 LAECLKQVERDDTIRCLLLTGA-GRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVICAVNGVAAGA 125 (274)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-SSCSBCCBCCC---------CCCHHHHHHHTHHHHHHHHHHCSSCEEEEECSCEETH
T ss_pred HHHHHHHHHhCCCceEEEEECC-CCceeCCcChHhhhccccccchHHHHHHHHHHHHHHHHHHHCCCCEEEEECCceeec
Confidence 4567788888999999998776 410 0 1111 12223332 7899999998876543
No 473
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=24.69 E-value=48 Score=34.80 Aligned_cols=49 Identities=8% Similarity=0.009 Sum_probs=34.6
Q ss_pred cccccCCHHHHhhcCCCccEEEEecCChhhHHHHHHHhhCCC--CcEEEEecCCC
Q 007482 56 AIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPT--IRVVAIIAEGV 108 (602)
Q Consensus 56 G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~~e~~~~~g--v~~~viis~Gf 108 (602)
.+.+..++.++.. +.|++|++||.+. +..+++.+...- -..+|..+=||
T Consensus 104 ~i~~t~dl~~al~---~ad~ii~avPs~~-~r~~l~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 104 NLVANPDLIDSVK---DVDIIVFNIPHQF-LPRICSQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp SEEEESCHHHHHT---TCSEEEECSCGGG-HHHHHHHHTTTSCTTCEEEECCCSC
T ss_pred CcEEeCCHHHHHh---cCCEEEEECChhh-hHHHHHHhccccCCCceeEEecccc
Confidence 4567788888776 4799999999875 888888886321 12344455687
No 474
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=24.58 E-value=3.7e+02 Score=25.32 Aligned_cols=80 Identities=6% Similarity=0.061 Sum_probs=43.2
Q ss_pred CCCcEEEEecChhH------HHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHH-H--HhhcCCCccEEEEEEecCCCc
Q 007482 160 RPGSVGFVSKSGGM------SNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHI-L--RFNNIPQVKMMVVLGELGGRD 230 (602)
Q Consensus 160 ~~G~valvSQSG~l------~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l-~--~l~~Dp~t~~I~ly~E~g~~~ 230 (602)
..++|++++..... .....+.+.+.|+-+. ++ .|+.. .-+..+.+ + +|...|+..+|+..-. ..
T Consensus 123 G~~~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~-~~-~~~~~--~~~~~~~~~~~~~l~~~~~~~ai~~~~d---~~ 195 (285)
T 3c3k_A 123 GKKRIALINHDLAYQYAQHRESGYLNRLKFHGLDYS-RI-SYAEN--LDYMAGKLATFSLLKSAVKPDAIFAISD---VL 195 (285)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHHHHHHTCCCC-EE-EECSS--SSHHHHHHHHHHHHSSSSCCSEEEESSH---HH
T ss_pred CCCeEEEEeCCCccccHHHHHHHHHHHHHHcCCCce-Ee-ecCCC--hHHHHHHHHHHHHHcCCCCCeEEEECCH---HH
Confidence 45688888765321 1223445566777665 33 33322 22233333 4 5666677777765322 23
Q ss_pred HHHHHHHHHhcCCCCC
Q 007482 231 EYSLVEALKQGKVNKP 246 (602)
Q Consensus 231 ~~~f~~~~r~~~~~KP 246 (602)
...+++++++...+.|
T Consensus 196 A~g~~~al~~~g~~vP 211 (285)
T 3c3k_A 196 AAGAIQALTESGLSIP 211 (285)
T ss_dssp HHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHcCCCCC
Confidence 4567888888655544
No 475
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=24.57 E-value=3.1e+02 Score=26.57 Aligned_cols=18 Identities=0% Similarity=-0.088 Sum_probs=13.9
Q ss_pred HHHHHhhCCCCcEEEEecC
Q 007482 88 SSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 88 ~~~e~~~~~gv~~~viis~ 106 (602)
.++++|.+.| +.+|.+|+
T Consensus 100 ~l~~~~~~~~-~~~v~~SS 117 (345)
T 2bll_A 100 RIIRYCVKYR-KRIIFPST 117 (345)
T ss_dssp HHHHHHHHTT-CEEEEECC
T ss_pred HHHHHHHHhC-CeEEEEec
Confidence 5678888778 77887776
No 476
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=24.44 E-value=60 Score=30.76 Aligned_cols=63 Identities=14% Similarity=0.191 Sum_probs=43.1
Q ss_pred EeeccCCCCCCC----CHHHHHHHhhcCCCccEEEEEEe-cCCC--cHHHHHHHHHhcCCCCCEEEEEeCcCcc
Q 007482 191 GIAIGGDVFPGS----TLSDHILRFNNIPQVKMMVVLGE-LGGR--DEYSLVEALKQGKVNKPVVAWVSGTCAR 257 (602)
Q Consensus 191 ~vs~Gn~~~~dv----~~~d~l~~l~~Dp~t~~I~ly~E-~g~~--~~~~f~~~~r~~~~~KPVv~~k~Gr~~~ 257 (602)
+|.+++.. +- .+..-|.++.+|+.++.|.+|+. +|+. .+....+.++. .++||+++..|...+
T Consensus 32 iI~l~g~I--~~~~a~~i~~~L~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~--~~~~v~t~~~G~AaS 101 (201)
T 3p2l_A 32 IVFLNGEV--NDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMVTAGMGVYDTMQF--IKPDVSTICIGLAAS 101 (201)
T ss_dssp EEEEESCB--CHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHH--SSSCEEEEEEEEEET
T ss_pred EEEEcCEE--CHHHHHHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHHHHHHH--hCCCeEEEEcCEehh
Confidence 56666664 32 23345667777888999999999 4432 24566677776 458999999886554
No 477
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=24.43 E-value=1.3e+02 Score=29.92 Aligned_cols=73 Identities=16% Similarity=0.202 Sum_probs=43.1
Q ss_pred ccccCCHHHHhhcCCCccEEEEecCCh-------hhHHHHHHHhhCCCCcEEEEecC----C--CCHHHHHHHHHHHHhC
Q 007482 57 IPVHSTVEAACAAHPMADVFINFSSFR-------SAAASSMAALKQPTIRVVAIIAE----G--VPEADTKQLIAYARSN 123 (602)
Q Consensus 57 ~~~y~sv~~i~~~~p~vDlavi~vp~~-------~~~~~~~e~~~~~gv~~~viis~----G--f~E~~~~~l~~~a~~~ 123 (602)
-|+|.+..+.....+ .++ +.+|.. ..++.+.+.+.+.+.+.+++.+- | ++....++|.++|+++
T Consensus 116 ~~~~~~~~~~~~~~g-~~~--~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 192 (391)
T 3dzz_A 116 EPVYNMFYSVIEGNG-RRV--ISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKH 192 (391)
T ss_dssp SSCCHHHHHHHHHTT-CEE--EECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHcC-CEE--EEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHC
Confidence 466666666554331 343 344431 23455555555457776665442 3 3345788999999999
Q ss_pred CCeeEcCCc
Q 007482 124 NKVVIGPAT 132 (602)
Q Consensus 124 g~riiGPNc 132 (602)
|+.++==++
T Consensus 193 ~~~li~De~ 201 (391)
T 3dzz_A 193 QVLLISDEI 201 (391)
T ss_dssp TCEEEEECT
T ss_pred CCEEEEecc
Confidence 998774444
No 478
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=24.27 E-value=1.5e+02 Score=31.36 Aligned_cols=41 Identities=5% Similarity=0.135 Sum_probs=27.4
Q ss_pred HHHHhhcCCCccEEEEecCCh-------------hhHHHHHHHhhCCCCcEEEEecC
Q 007482 63 VEAACAAHPMADVFINFSSFR-------------SAAASSMAALKQPTIRVVAIIAE 106 (602)
Q Consensus 63 v~~i~~~~p~vDlavi~vp~~-------------~~~~~~~e~~~~~gv~~~viis~ 106 (602)
+.++.. ++|++|-+.... .....+++.|.+.+++.+|.+|+
T Consensus 161 ~~~~~~---~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS 214 (478)
T 4dqv_A 161 WRRLAE---TVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVST 214 (478)
T ss_dssp HHHHHH---HCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEE
T ss_pred HHHHHc---CCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEee
Confidence 444444 379988664321 12346889999899988888887
No 479
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=24.25 E-value=3e+02 Score=22.59 Aligned_cols=112 Identities=12% Similarity=0.112 Sum_probs=66.5
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|-+|.-.-.....+...+.. + +. +... -+..+.++++.+.+ ..+|++=+.....++-.+++.+++..
T Consensus 3 ~Ilivdd~~~~~~~l~~~l~~-~--~~-v~~~-------~~~~~a~~~~~~~~-~dlvl~D~~lp~~~g~~~~~~l~~~~ 70 (139)
T 2jk1_A 3 AILLVDDEPHSLAAMKLALED-D--FD-VLTA-------QGAEAAIAILEEEW-VQVIICDQRMPGRTGVDFLTEVRERW 70 (139)
T ss_dssp EEEEECSSHHHHHHHHHHHTT-T--SC-EEEE-------SSHHHHHHHHHHSC-EEEEEEESCCSSSCHHHHHHHHHHHC
T ss_pred eEEEEcCCHHHHHHHHHHhhc-C--ce-EEEc-------CCHHHHHHHHhcCC-CCEEEEeCCCCCCcHHHHHHHHHHhC
Confidence 456666666555555555543 2 32 2222 23457788776643 56676666544457889999998755
Q ss_pred CCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHH
Q 007482 243 VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFE 309 (602)
Q Consensus 243 ~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~ 309 (602)
...|||++- +.... .....+++..|+ ...-+.++|...++.+..
T Consensus 71 ~~~~ii~~s-~~~~~----------------------~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~ 118 (139)
T 2jk1_A 71 PETVRIIIT-GYTDS----------------------ASMMAAINDAGIHQFLTKPWHPEQLLSSARNAAR 118 (139)
T ss_dssp TTSEEEEEE-SCTTC----------------------HHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEe-CCCCh----------------------HHHHHHHHhhchhhhccCCCCHHHHHHHHHHHHH
Confidence 566877762 22221 334455555554 345678888888876654
No 480
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=24.20 E-value=64 Score=28.16 Aligned_cols=49 Identities=16% Similarity=0.221 Sum_probs=31.2
Q ss_pred ecCChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCC
Q 007482 79 FSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPA 131 (602)
Q Consensus 79 ~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPN 131 (602)
.+|... .+..+.++.-.+++ ++|+|.|+.. .+++++.|+++|+.|+--+
T Consensus 57 I~~G~r-~~~~l~a~~~~~~~-~iIlt~g~~~--~~~i~~~A~~~~ipvl~t~ 105 (139)
T 2ioj_A 57 VTGGDR-SDLLLTALEMPNVR-CLILTGNLEP--VQLVLTKAEERGVPVILTG 105 (139)
T ss_dssp EEETTC-HHHHHHHTTCTTEE-EEEEETTCCC--CHHHHHHHHHHTCCEEECS
T ss_pred EEcCCH-HHHHHHHHhCCCCc-EEEEcCCCCC--CHHHHHHHHHCCCeEEEEC
Confidence 354543 34445544315665 5667999864 4567799999999887543
No 481
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=24.13 E-value=3.8e+02 Score=23.87 Aligned_cols=35 Identities=6% Similarity=-0.140 Sum_probs=24.4
Q ss_pred ccEEEEecCChh---------------hHHHHHHHhhCCCCcEEEEecCC
Q 007482 73 ADVFINFSSFRS---------------AAASSMAALKQPTIRVVAIIAEG 107 (602)
Q Consensus 73 vDlavi~vp~~~---------------~~~~~~e~~~~~gv~~~viis~G 107 (602)
+|.+|.+..... ....++++|.+.+++.+|.+|+.
T Consensus 66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 115 (215)
T 2a35_A 66 IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSAL 115 (215)
T ss_dssp CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCc
Confidence 698887765421 13457788888889988888773
No 482
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=24.10 E-value=1.8e+02 Score=29.72 Aligned_cols=77 Identities=13% Similarity=0.039 Sum_probs=50.8
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCCc-HHHHHHHHHhcC-CCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHH
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGGRD-EYSLVEALKQGK-VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQA 281 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~~~-~~~f~~~~r~~~-~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~ 281 (602)
-.++++++.+ +..|.|++-.= |..+ +..|+++++++. +++|||..- |+..| .- +..
T Consensus 234 ~~~~l~a~~~-~g~~GiVle~~-G~Gn~p~~~~~~l~~a~~~Gi~VV~~S--rc~~G--~V----------~~~------ 291 (334)
T 3nxk_A 234 SGVAAKALFE-HGTKGIVVAGS-GAGSIHKNQKDVLKELLKKGLKVVVSS--RVVAG--CV----------AVS------ 291 (334)
T ss_dssp HHHHHHHHHH-TTCCEEEEEEB-TTTBCCHHHHHHHHHHHTTTCEEEEEE--SSSBS--CC----------CCC------
T ss_pred CHHHHHHHHh-CCCCEEEEeeE-CCCCCcHHHHHHHHHHHHCCCEEEEeC--CCCCC--cc----------Ccc------
Confidence 4588888877 67888877666 5443 578999998876 677877663 66655 11 111
Q ss_pred HHHHHHHcCCcccCCHHHHHHHH
Q 007482 282 KNQALRDAGAVVPTSYEAFESAI 304 (602)
Q Consensus 282 ~~a~~~qaGvi~v~~~~el~~~~ 304 (602)
.-++++|+|...++.---..+
T Consensus 292 --~~l~~~Gvi~~~dlt~ekAri 312 (334)
T 3nxk_A 292 --DSDEKLGFISAEDLNPQKARV 312 (334)
T ss_dssp --HHHHHHTEEECTTCCHHHHHH
T ss_pred --cccccCCEEECCCCCHHHHHH
Confidence 234688998887776533333
No 483
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=24.02 E-value=2.8e+02 Score=22.31 Aligned_cols=121 Identities=11% Similarity=0.079 Sum_probs=78.6
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcC------CCccEEEEEEecCCCcHHHHH
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNI------PQVKMMVVLGELGGRDEYSLV 235 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~D------p~t~~I~ly~E~g~~~~~~f~ 235 (602)
.+|-+|...-.....+...+.+.|..+ .+... .+..+.++++.+. ....+|++-++....++.+++
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~~~~~-~v~~~-------~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~ 74 (140)
T 1k68_A 3 KKIFLVEDNKADIRLIQEALANSTVPH-EVVTV-------RDGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVL 74 (140)
T ss_dssp CEEEEECCCHHHHHHHHHHHHTCSSCC-EEEEE-------CSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEE-------CCHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHH
Confidence 467888888888888878777655421 22222 2456888888872 456777777664456788999
Q ss_pred HHHHhcC--CCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHH
Q 007482 236 EALKQGK--VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFE 309 (602)
Q Consensus 236 ~~~r~~~--~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~ 309 (602)
+.+|+.. ...|||++-..... .....+ .++|+. ..-+.++|...++.+..
T Consensus 75 ~~l~~~~~~~~~pii~ls~~~~~-----------------------~~~~~~-~~~g~~~~l~kP~~~~~l~~~i~~~~~ 130 (140)
T 1k68_A 75 AEIKSDPTLKRIPVVVLSTSINE-----------------------DDIFHS-YDLHVNCYITKSANLSQLFQIVKGIEE 130 (140)
T ss_dssp HHHHHSTTGGGSCEEEEESCCCH-----------------------HHHHHH-HHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred HHHHcCcccccccEEEEecCCcH-----------------------HHHHHH-HHhchhheecCCCCHHHHHHHHHHHHH
Confidence 9999864 56799888422111 222223 345653 35688999999888876
Q ss_pred hHhhc
Q 007482 310 KLVEE 314 (602)
Q Consensus 310 ~~~~~ 314 (602)
...+.
T Consensus 131 ~~~~~ 135 (140)
T 1k68_A 131 FWLST 135 (140)
T ss_dssp HHHTT
T ss_pred HHccc
Confidence 65544
No 484
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=23.75 E-value=82 Score=32.05 Aligned_cols=22 Identities=32% Similarity=0.437 Sum_probs=16.6
Q ss_pred HHHHHHHhhcCCCccEEEEEEe
Q 007482 204 LSDHILRFNNIPQVKMMVVLGE 225 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E 225 (602)
+.+.++.+.+||++|+|++-.+
T Consensus 67 L~~al~~~~~d~~vrvvVltG~ 88 (333)
T 3njd_A 67 LSALVERADLDPDVHVILVSGR 88 (333)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES
T ss_pred HHHHHHHHhhCCCcEEEEEECC
Confidence 4566777777888888888776
No 485
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=23.71 E-value=4.7e+02 Score=24.69 Aligned_cols=172 Identities=10% Similarity=0.107 Sum_probs=86.2
Q ss_pred cCCHHHHhhcCCCccEEEEecCChhhHHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeE--cCCcc--cc
Q 007482 60 HSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI--GPATV--GG 135 (602)
Q Consensus 60 y~sv~~i~~~~p~vDlavi~vp~~~~~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~rii--GPNc~--G~ 135 (602)
+..+++...+.+ .++.+............++.+.+.++.++|+.+....+ +.++.+++ |+.++ +-..- ++
T Consensus 30 ~~gi~~~a~~~g-~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~----~~~~~~~~-~iPvV~i~~~~~~~~~ 103 (289)
T 3k9c_A 30 VEQIYAAATRRG-YDVMLSAVAPSRAEKVAVQALMRERCEAAILLGTRFDT----DELGALAD-RVPALVVARASGLPGV 103 (289)
T ss_dssp HHHHHHHHHHTT-CEEEEEEEBTTBCHHHHHHHHTTTTEEEEEEETCCCCH----HHHHHHHT-TSCEEEESSCCSSTTS
T ss_pred HHHHHHHHHHCC-CEEEEEeCCCCHHHHHHHHHHHhCCCCEEEEECCCCCH----HHHHHHHc-CCCEEEEcCCCCCCCC
Confidence 334445444443 77777655443224566777777899998888766554 23344445 77644 32111 00
Q ss_pred --cccCcccccccCCcccccccccCCCCCcEEEEecChhH-----HHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHH
Q 007482 136 --IQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGM-----SNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHI 208 (602)
Q Consensus 136 --~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQSG~l-----~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l 208 (602)
+...... +..............+|++++..... .....+.+.+.|+-+...+-.++.. .+....-+-
T Consensus 104 ~~V~~D~~~-----~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~-~~~~~~~~~ 177 (289)
T 3k9c_A 104 GAVRGDDVA-----GITLAVDHLTELGHRNIAHIDGADAPGGADRRAGFLAAMDRHGLSASATVVTGGTT-ETEGAEGMH 177 (289)
T ss_dssp EEEEECHHH-----HHHHHHHHHHHTTCCSEEEECCTTSTTHHHHHHHHHHHHHHTTCGGGEEEECCCSS-HHHHHHHHH
T ss_pred CEEEeChHH-----HHHHHHHHHHHCCCCcEEEEeCCCCccHHHHHHHHHHHHHHCCCCCCccEEECCCC-HHHHHHHHH
Confidence 0000000 00000000001245589999765432 2234455677787754333333322 022233345
Q ss_pred HHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcCCCCC
Q 007482 209 LRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKP 246 (602)
Q Consensus 209 ~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~~~KP 246 (602)
++|...|+..+|+..-. .....+++++++...+.|
T Consensus 178 ~~l~~~~~~~ai~~~~d---~~A~g~~~al~~~g~~vP 212 (289)
T 3k9c_A 178 TLLEMPTPPTAVVAFND---RCATGVLDLLVRSGRDVP 212 (289)
T ss_dssp HHHTSSSCCSEEEESSH---HHHHHHHHHHHHTTCCTT
T ss_pred HHHcCCCCCCEEEECCh---HHHHHHHHHHHHcCCCCC
Confidence 56666778777754332 234567888888665544
No 486
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=23.70 E-value=1.2e+02 Score=29.80 Aligned_cols=16 Identities=38% Similarity=0.603 Sum_probs=12.5
Q ss_pred CCCCEEEEEeCcCccC
Q 007482 243 VNKPVVAWVSGTCARL 258 (602)
Q Consensus 243 ~~KPVv~~k~Gr~~~g 258 (602)
..||||+..-|..-.|
T Consensus 106 ~~kPvIAav~G~a~Gg 121 (275)
T 1dci_A 106 CPKPVIAAIHGGCIGG 121 (275)
T ss_dssp SSSCEEEEECSEEETH
T ss_pred CCCCEEEEECCeeeHH
Confidence 6899999988766543
No 487
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=23.60 E-value=3.7e+02 Score=25.99 Aligned_cols=39 Identities=10% Similarity=0.082 Sum_probs=28.9
Q ss_pred HHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCee
Q 007482 87 ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV 127 (602)
Q Consensus 87 ~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~ri 127 (602)
...++.|.+.|+.++++. .++.+..+++++.++++|+.+
T Consensus 112 ~~f~~~~~~aG~dgvii~--dl~~ee~~~~~~~~~~~gl~~ 150 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVP--DLPPEEAEELKAVMKKYVLSF 150 (262)
T ss_dssp HHHHHHHHHTTCCEEECT--TCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHcCCCEEEEC--CCCHHHHHHHHHHHHHcCCcE
Confidence 466777888999887763 455556778888999998654
No 488
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=23.57 E-value=93 Score=30.50 Aligned_cols=69 Identities=14% Similarity=0.220 Sum_probs=42.0
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--------------CcHH---HHH----HHHHhc-CCCCCEEEEEeCcCccCccc
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG--------------RDEY---SLV----EALKQG-KVNKPVVAWVSGTCARLFKS 261 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~--------------~~~~---~f~----~~~r~~-~~~KPVv~~k~Gr~~~g~~~ 261 (602)
+.+.++.+.+||++|+|++-.+ |- .++. ++. +..++. ...||||+..-|..-.| -
T Consensus 56 L~~al~~~~~d~~vr~vVltg~-g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GG--~ 132 (263)
T 2j5g_A 56 FPDAFYDISRDRDNRVVILTGS-GDAWMAEIDFPSLGDVTNPREWDKTYWEGKKVLQNLLDIEVPVISAVNGAALLH--S 132 (263)
T ss_dssp HHHHHHHHHHCTTCCEEEEECB-TTEEECEECSGGGCCTTSHHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEECSC--G
T ss_pred HHHHHHHHHhCCCcEEEEEECC-CCCcccCcCHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcchHH--H
Confidence 4577788888999999999876 41 1221 222 223333 37899999998877644 4
Q ss_pred cccccccCCcCCCC
Q 007482 262 EVQFGHAGAKSGGE 275 (602)
Q Consensus 262 ~aa~sHtgalag~~ 275 (602)
.-+...-=.++.++
T Consensus 133 ~LalacD~ria~~~ 146 (263)
T 2j5g_A 133 EYILTTDIILASEN 146 (263)
T ss_dssp GGGGGCSEEEEETT
T ss_pred HHHHhCCEEEEcCC
Confidence 44444433344443
No 489
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=23.54 E-value=1.6e+02 Score=28.65 Aligned_cols=24 Identities=13% Similarity=0.103 Sum_probs=16.1
Q ss_pred cEEEEee--CCcH-HHHHHHhcCCeEE
Q 007482 11 TQALFYN--YKQL-PIQRMLDFDFLCV 34 (602)
Q Consensus 11 s~avv~g--~~~~-~~~~~~~~g~~~V 34 (602)
++.|+|| ..|+ +++.|++.|++++
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~ 39 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTY 39 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEE
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEE
Confidence 5666653 2334 8888888898864
No 490
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=23.52 E-value=1.3e+02 Score=30.36 Aligned_cols=25 Identities=12% Similarity=0.016 Sum_probs=16.7
Q ss_pred cEEEEeeCCcH----HHHHHHhcCCeEEE
Q 007482 11 TQALFYNYKQL----PIQRMLDFDFLCVA 35 (602)
Q Consensus 11 s~avv~g~~~~----~~~~~~~~g~~~V~ 35 (602)
.+++|.|.+|. +++.|++.|++++.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~ 57 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHG 57 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEE
Confidence 34555565544 77888889998753
No 491
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=23.41 E-value=3.2e+02 Score=22.76 Aligned_cols=118 Identities=11% Similarity=0.038 Sum_probs=73.7
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcC------CCccEEEEEEecCCCcHHHHH
Q 007482 162 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNI------PQVKMMVVLGELGGRDEYSLV 235 (602)
Q Consensus 162 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~D------p~t~~I~ly~E~g~~~~~~f~ 235 (602)
-+|-+|.-.-.....+...+.+.|.++. +.. -.+..+.++++.+. ....+|++=++....++..++
T Consensus 9 ~~ILivdd~~~~~~~l~~~L~~~~~~~~-v~~-------~~~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~g~~l~ 80 (149)
T 1i3c_A 9 KVILLVEDSKADSRLVQEVLKTSTIDHE-LII-------LRDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVL 80 (149)
T ss_dssp EEEEEECCCHHHHHHHHHHHHSCCSCEE-EEE-------ECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHH
T ss_pred CeEEEEECCHHHHHHHHHHHHhcCCCcc-EEE-------eCCHHHHHHHHHhccccccCCCCCEEEEeCCCCCCcHHHHH
Confidence 4688888888888777777776554322 222 22345788888752 345677666654445789999
Q ss_pred HHHHhcC--CCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHH
Q 007482 236 EALKQGK--VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFE 309 (602)
Q Consensus 236 ~~~r~~~--~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~ 309 (602)
+.+|+.. ...|||++-+. ... .....++ ++|+ ...-+.++|...++.+..
T Consensus 81 ~~l~~~~~~~~~piiils~~-~~~----------------------~~~~~~~-~~ga~~~l~KP~~~~~L~~~i~~~~~ 136 (149)
T 1i3c_A 81 AEIKQNPDLKRIPVVVLTTS-HNE----------------------DDVIASY-ELHVNCYLTKSRNLKDLFKMVQGIES 136 (149)
T ss_dssp HHHHHCTTTTTSCEEEEESC-CCH----------------------HHHHHHH-HTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred HHHHhCcCcCCCeEEEEECC-CCh----------------------HHHHHHH-HcCCcEEEECCCCHHHHHHHHHHHHH
Confidence 9998853 46798888322 111 1222333 4564 345688999988887765
Q ss_pred hH
Q 007482 310 KL 311 (602)
Q Consensus 310 ~~ 311 (602)
..
T Consensus 137 ~~ 138 (149)
T 1i3c_A 137 FW 138 (149)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 492
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=23.38 E-value=96 Score=30.12 Aligned_cols=54 Identities=22% Similarity=0.373 Sum_probs=31.2
Q ss_pred HHHHHHHhhcCCCccEEEEEEecC-----CCcHHHH----------H---HHHHhc-CCCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELG-----GRDEYSL----------V---EALKQG-KVNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g-----~~~~~~f----------~---~~~r~~-~~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++|+|++-.+ | +.|-..| . +..++. ...||||+..-|..-.|
T Consensus 37 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 109 (258)
T 2pbp_A 37 IVAAVEAFDRNEKVRVIVLTGR-GRAFAAGADIQEMAKDDPIRLEWLNQFADWDRLSIVKTPMIAAVNGLALGG 109 (258)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTEEECCCCHHHHHTCCHHHHHHHCTTHHHHHHHTCCSCEEEEECSEEETH
T ss_pred HHHHHHHHhhCCCceEEEEECC-CCCccCCcCHHHHhcccchhHHHHHHHHHHHHHHhCCCCEEEEEcCEEEhH
Confidence 3456666777777777777765 3 1111111 0 222222 37899999988866543
No 493
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=23.37 E-value=76 Score=31.36 Aligned_cols=54 Identities=28% Similarity=0.373 Sum_probs=35.1
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----Cc-------------HH-------HHHHHHHhcC-CCCCEEEEEeCcCcc
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGG-----RD-------------EY-------SLVEALKQGK-VNKPVVAWVSGTCAR 257 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~-----~~-------------~~-------~f~~~~r~~~-~~KPVv~~k~Gr~~~ 257 (602)
+.+.++.+.+||++|+|++-.+ |- .| .. .+.+..++.. ..||||+..-|..-.
T Consensus 52 L~~al~~~~~d~~vr~vVltg~-G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 130 (279)
T 3t3w_A 52 LDAAWTRAAEDNDVSVIVLRAN-GKHFSAGHDLRGGGPVPDKLTLEFIYAHESRRYLEYSLRWRNVPKPSIAAVQGRCIS 130 (279)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEC-SSCSBCCBCCC--------CCHHHHHHHHHHHTHHHHHHHHHCSSCEEEEECSEEEG
T ss_pred HHHHHHHHhcCCCeEEEEEECC-CCceeeccChHhhhhcccccchHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeEhH
Confidence 4567778888999999999888 51 01 01 1122223333 789999999887655
Q ss_pred C
Q 007482 258 L 258 (602)
Q Consensus 258 g 258 (602)
|
T Consensus 131 g 131 (279)
T 3t3w_A 131 G 131 (279)
T ss_dssp G
T ss_pred H
Confidence 4
No 494
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=23.34 E-value=2.8e+02 Score=21.96 Aligned_cols=112 Identities=13% Similarity=0.132 Sum_probs=66.6
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|-+|.-.-.....+...+...| +. +.... +..+.++++.+. ...+|++-++....++-.+++.+|+ .
T Consensus 4 ~ilivdd~~~~~~~l~~~L~~~~--~~-v~~~~-------~~~~~~~~~~~~-~~dlvi~d~~l~~~~g~~~~~~l~~-~ 71 (122)
T 1zgz_A 4 HIVIVEDEPVTQARLQSYFTQEG--YT-VSVTA-------SGAGLREIMQNQ-SVDLILLDINLPDENGLMLTRALRE-R 71 (122)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTT--CE-EEEES-------SHHHHHHHHHHS-CCSEEEEESCCSSSCHHHHHHHHHT-T
T ss_pred EEEEEECCHHHHHHHHHHHHHCC--Ce-EEEec-------CHHHHHHHHhcC-CCCEEEEeCCCCCCChHHHHHHHHh-c
Confidence 57777777777777777776554 32 22222 234677776553 3567777666444578899999988 5
Q ss_pred CCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHh
Q 007482 243 VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEK 310 (602)
Q Consensus 243 ~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~ 310 (602)
...|||++- +..+. .....++ ++|+ ...-+.++|...++.+..+
T Consensus 72 ~~~~ii~~s-~~~~~----------------------~~~~~~~-~~ga~~~l~Kp~~~~~l~~~i~~~~~~ 119 (122)
T 1zgz_A 72 STVGIILVT-GRSDR----------------------IDRIVGL-EMGADDYVTKPLELRELVVRVKNLLWR 119 (122)
T ss_dssp CCCEEEEEE-SSCCH----------------------HHHHHHH-HHTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEE-CCCCh----------------------hhHHHHH-HhCHHHHccCCCCHHHHHHHHHHHHHH
Confidence 567877773 22211 1112222 3454 3356888888888766543
No 495
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=23.29 E-value=66 Score=31.41 Aligned_cols=54 Identities=13% Similarity=0.153 Sum_probs=35.3
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCC--------------cH---HH----HHHHHHhc-CCCCCEEEEEeCcCccC
Q 007482 204 LSDHILRFNNIPQVKMMVVLGELGGR--------------DE---YS----LVEALKQG-KVNKPVVAWVSGTCARL 258 (602)
Q Consensus 204 ~~d~l~~l~~Dp~t~~I~ly~E~g~~--------------~~---~~----f~~~~r~~-~~~KPVv~~k~Gr~~~g 258 (602)
+.+.++.+.+||++++|++-.+ |.+ +. .. +.+..++. ...||||+..-|..-.|
T Consensus 36 L~~al~~~~~d~~vr~vVltg~-~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 111 (260)
T 1sg4_A 36 LVISLEKLENDKSFRGVILTSD-RPGVFSAGLDLTEMCGRSPAHYAGYWKAVQELWLRLYQSNLVLVSAINGACPAG 111 (260)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-STEESCCEECGGGGSSCCHHHHHHHHHHHHHHHHHHHTCSSEEEEEECEEBCHH
T ss_pred HHHHHHHHHhCCCceEEEEEcC-CCCceEcCcCHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCEEEEECCeeehH
Confidence 4567788888999999999988 421 11 12 22223333 37899999988866543
No 496
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=23.16 E-value=91 Score=29.36 Aligned_cols=63 Identities=19% Similarity=0.236 Sum_probs=43.6
Q ss_pred ccEEEEecCChhh----------------HHHHHHHhhCCCCcEEEEecCCCCHHHHHHHHHHHHhCCCeeEcCCccccc
Q 007482 73 ADVFINFSSFRSA----------------AASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGI 136 (602)
Q Consensus 73 vDlavi~vp~~~~----------------~~~~~e~~~~~gv~~~viis~Gf~E~~~~~l~~~a~~~g~riiGPNc~G~~ 136 (602)
+|..++++..... .+++++++...|.+.+-+++ -+.....+...+..+++|+.++.|++.|+.
T Consensus 67 ~d~ivi~Cnt~~~~~g~~~~~l~~~~~iP~~a~~~a~~~~g~~rvgvlt-~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~ 145 (223)
T 2dgd_A 67 SDIIIYGRTYGTHKHAHVIKRVIKDVVIPEESVYELLKKLNVRKLWIGT-PYIKERTLEEVEWWRNKGFEIVGYDGLGKI 145 (223)
T ss_dssp CSEEEECCCTTTTTCHHHHHHHSTTCBCHHHHHHHHHHHTTCCEEEEEE-SSCHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred CCEEEEcCCHHHHhhhHHHHHHHHhcCCCHHHHHHHHHHcCCCeEEEEe-CCchHHHHHHHHHHHhCCcEEecccCCCCC
Confidence 6888888743211 35556666667778888886 455555666677778889999999887754
No 497
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=23.10 E-value=3.1e+02 Score=25.71 Aligned_cols=23 Identities=13% Similarity=-0.061 Sum_probs=15.3
Q ss_pred EEEEeeCCcH----HHHHHHhcCCeEE
Q 007482 12 QALFYNYKQL----PIQRMLDFDFLCV 34 (602)
Q Consensus 12 ~avv~g~~~~----~~~~~~~~g~~~V 34 (602)
+++|.|.++- +.+.|.+.|++++
T Consensus 17 ~vlVTGas~gIG~~ia~~l~~~G~~V~ 43 (247)
T 1uzm_A 17 SVLVTGGNRGIGLAIAQRLAADGHKVA 43 (247)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEE
Confidence 4555554433 7788888999864
No 498
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=22.88 E-value=2.8e+02 Score=21.83 Aligned_cols=112 Identities=17% Similarity=0.155 Sum_probs=65.2
Q ss_pred EEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcCC
Q 007482 164 VGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKV 243 (602)
Q Consensus 164 valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~~ 243 (602)
|-+|..+-.....+...+.+.|. . +... -+..+.++++.+. ...+|++=+.....++-++++.+++...
T Consensus 3 ilivdd~~~~~~~l~~~l~~~g~--~-v~~~-------~~~~~a~~~~~~~-~~dlil~D~~l~~~~g~~~~~~l~~~~~ 71 (121)
T 2pl1_A 3 VLVVEDNALLRHHLKVQIQDAGH--Q-VDDA-------EDAKEADYYLNEH-IPDIAIVDLGLPDEDGLSLIRRWRSNDV 71 (121)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTC--E-EEEE-------SSHHHHHHHHHHS-CCSEEEECSCCSSSCHHHHHHHHHHTTC
T ss_pred EEEEeCcHHHHHHHHHHHhhcCC--E-EEEe-------CCHHHHHHHHhcc-CCCEEEEecCCCCCCHHHHHHHHHhcCC
Confidence 45566666666666666665543 2 2222 2345777777654 3466666555334578899999987656
Q ss_pred CCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHh
Q 007482 244 NKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEK 310 (602)
Q Consensus 244 ~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~ 310 (602)
..|||++-. .... ... .-.-++|+ ...-+.++|...++.+..+
T Consensus 72 ~~~ii~~s~-~~~~----------------------~~~-~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~~ 118 (121)
T 2pl1_A 72 SLPILVLTA-RESW----------------------QDK-VEVLSAGADDYVTKPFHIEEVMARMQALMRR 118 (121)
T ss_dssp CSCEEEEES-CCCH----------------------HHH-HHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEec-CCCH----------------------HHH-HHHHHcCccceEECCCCHHHHHHHHHHHHHh
Confidence 789988732 1111 111 22234554 3456888888888766543
No 499
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=22.86 E-value=1.1e+02 Score=29.95 Aligned_cols=24 Identities=29% Similarity=0.419 Sum_probs=15.7
Q ss_pred HHHHHHHhcCCCCCEEEEEeCcCccC
Q 007482 233 SLVEALKQGKVNKPVVAWVSGTCARL 258 (602)
Q Consensus 233 ~f~~~~r~~~~~KPVv~~k~Gr~~~g 258 (602)
+++..+++ ..||||+..-|..-.|
T Consensus 98 ~~~~~l~~--~~kPvIAav~G~a~Gg 121 (273)
T 2uzf_A 98 DLQRLIRI--IPKPVIAMVKGYAVGG 121 (273)
T ss_dssp HHHHHHHH--SSSCEEEEECEEEETH
T ss_pred HHHHHHHh--CCCCEEEEECCEEeeh
Confidence 34444443 6899999987765543
No 500
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.81 E-value=2.1e+02 Score=23.73 Aligned_cols=113 Identities=12% Similarity=0.103 Sum_probs=68.8
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeeccCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCCcHHHHHHHHHhcC
Q 007482 163 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 242 (602)
Q Consensus 163 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~t~~I~ly~E~g~~~~~~f~~~~r~~~ 242 (602)
+|-+|.-.-.....+...+... |+. +.... +..+.++++.+. ...+|++-+.....++..+++.+|+..
T Consensus 6 ~ILivdd~~~~~~~l~~~L~~~--g~~-v~~~~-------~~~~a~~~l~~~-~~dlvllD~~l~~~~g~~l~~~l~~~~ 74 (137)
T 3cfy_A 6 RVLLVEDSTSLAILYKQYVKDE--PYD-IFHVE-------TGRDAIQFIERS-KPQLIILDLKLPDMSGEDVLDWINQND 74 (137)
T ss_dssp EEEEECSCTTHHHHHHHHTTTS--SSE-EEEES-------SHHHHHHHHHHH-CCSEEEECSBCSSSBHHHHHHHHHHTT
T ss_pred eEEEEeCCHHHHHHHHHHHHhc--Cce-EEEeC-------CHHHHHHHHHhc-CCCEEEEecCCCCCCHHHHHHHHHhcC
Confidence 5778888877777776666543 443 22222 345677777653 245666655534457889999998865
Q ss_pred CCCCEEEEEeCcCccCccccccccccCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHh
Q 007482 243 VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFEK 310 (602)
Q Consensus 243 ~~KPVv~~k~Gr~~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~~ 310 (602)
...|||++-.. ... ... .-.-++|+. ..-+.++|...++.+...
T Consensus 75 ~~~~ii~ls~~-~~~----------------------~~~-~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~~ 122 (137)
T 3cfy_A 75 IPTSVIIATAH-GSV----------------------DLA-VNLIQKGAEDFLEKPINADRLKTSVALHLKR 122 (137)
T ss_dssp CCCEEEEEESS-CCH----------------------HHH-HHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEec-CcH----------------------HHH-HHHHHCCccEEEeCCCCHHHHHHHHHHHHHH
Confidence 67788877321 111 112 223355653 456888998888776643
Done!