Query 007484
Match_columns 602
No_of_seqs 408 out of 2138
Neff 6.7
Searched_HMMs 46136
Date Thu Mar 28 11:13:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007484.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007484hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2194 Aminopeptidases of the 100.0 1.3E-95 3E-100 815.6 38.2 526 33-601 33-576 (834)
2 PRK10199 alkaline phosphatase 100.0 5.2E-28 1.1E-32 253.9 26.2 260 53-331 30-345 (346)
3 PF04389 Peptidase_M28: Peptid 100.0 1.1E-29 2.3E-34 245.0 10.1 168 145-314 1-179 (179)
4 KOG2195 Transferrin receptor a 100.0 4E-28 8.7E-33 274.0 16.6 276 123-407 333-634 (702)
5 KOG3946 Glutaminyl cyclase [Po 99.8 2.5E-19 5.4E-24 178.7 16.2 248 52-326 49-334 (338)
6 COG2234 Iap Predicted aminopep 99.7 1.2E-17 2.6E-22 182.9 14.8 190 126-323 182-389 (435)
7 TIGR03176 AllC allantoate amid 99.5 5.1E-14 1.1E-18 153.4 14.7 127 54-212 3-141 (406)
8 PRK09133 hypothetical protein; 99.5 1E-12 2.2E-17 145.8 18.6 152 48-226 31-203 (472)
9 PRK12891 allantoate amidohydro 99.5 5.3E-13 1.1E-17 145.7 15.6 129 50-210 6-146 (414)
10 PRK12890 allantoate amidohydro 99.5 5.9E-13 1.3E-17 145.2 15.7 128 52-211 7-145 (414)
11 TIGR01879 hydantase amidase, h 99.4 8.7E-13 1.9E-17 143.4 14.9 126 55-212 2-139 (401)
12 PRK13590 putative bifunctional 99.4 9E-13 1.9E-17 150.1 14.7 127 52-210 179-321 (591)
13 PRK08596 acetylornithine deace 99.4 2.8E-12 6E-17 140.3 17.7 146 54-228 13-179 (421)
14 PRK09290 allantoate amidohydro 99.4 1.7E-12 3.7E-17 141.6 15.6 130 51-212 4-145 (413)
15 PRK13799 unknown domain/N-carb 99.4 9.7E-13 2.1E-17 149.7 13.8 127 52-210 179-321 (591)
16 PRK06133 glutamate carboxypept 99.4 5.7E-12 1.2E-16 137.5 18.7 144 54-228 37-198 (410)
17 PRK07473 carboxypeptidase; Pro 99.4 6E-12 1.3E-16 135.8 18.2 150 51-229 8-175 (376)
18 PRK12892 allantoate amidohydro 99.4 5.6E-12 1.2E-16 137.2 15.6 129 51-212 7-146 (412)
19 PRK12893 allantoate amidohydro 99.4 5.9E-12 1.3E-16 137.1 15.1 129 52-212 8-148 (412)
20 PRK13013 succinyl-diaminopimel 99.4 2.1E-11 4.6E-16 133.2 17.9 155 54-228 14-189 (427)
21 PRK07338 hypothetical protein; 99.4 1.7E-11 3.6E-16 133.1 16.9 156 54-227 17-190 (402)
22 TIGR01910 DapE-ArgE acetylorni 99.3 1.5E-11 3.3E-16 132.2 15.8 146 58-228 2-168 (375)
23 PRK08588 succinyl-diaminopimel 99.3 2E-11 4.4E-16 131.2 16.4 141 53-227 1-162 (377)
24 PRK07906 hypothetical protein; 99.3 1.3E-11 2.7E-16 135.2 15.0 130 57-213 2-155 (426)
25 PRK08262 hypothetical protein; 99.3 4E-11 8.8E-16 133.6 17.6 134 48-211 38-201 (486)
26 PRK07907 hypothetical protein; 99.3 4.1E-11 8.8E-16 132.2 17.1 144 53-228 17-185 (449)
27 PRK06446 hypothetical protein; 99.3 3.3E-11 7.2E-16 132.5 16.1 143 54-228 2-165 (436)
28 PRK09104 hypothetical protein; 99.3 7.4E-11 1.6E-15 130.7 18.4 147 53-227 16-191 (464)
29 PF09940 DUF2172: Domain of un 99.3 1.6E-10 3.5E-15 121.4 19.4 242 50-330 56-308 (386)
30 PF05450 Nicastrin: Nicastrin; 99.3 6.2E-11 1.3E-15 119.7 15.1 165 145-310 1-200 (234)
31 PRK08201 hypothetical protein; 99.3 6.6E-11 1.4E-15 130.8 16.4 147 54-228 14-184 (456)
32 TIGR01880 Ac-peptdase-euk N-ac 99.3 9.2E-11 2E-15 127.3 16.8 148 50-226 5-174 (400)
33 PRK13983 diaminopimelate amino 99.3 1.4E-10 3E-15 125.4 18.1 151 54-226 5-181 (400)
34 TIGR01893 aa-his-dipept aminoa 99.2 8E-11 1.7E-15 131.0 15.3 136 53-227 3-165 (477)
35 PRK04443 acetyl-lysine deacety 99.2 1.1E-10 2.4E-15 124.5 15.7 134 52-228 4-149 (348)
36 PRK07079 hypothetical protein; 99.2 1.3E-10 2.8E-15 129.0 16.3 149 52-227 15-191 (469)
37 PRK06915 acetylornithine deace 99.2 2.4E-10 5.2E-15 124.9 17.4 156 54-226 17-193 (422)
38 PRK05469 peptidase T; Provisio 99.2 1.9E-10 4.1E-15 125.3 16.0 138 55-226 3-198 (408)
39 PRK06837 acetylornithine deace 99.2 2.5E-10 5.5E-15 125.1 16.3 154 54-226 20-197 (427)
40 TIGR01883 PepT-like peptidase 99.2 2.5E-10 5.4E-15 122.0 15.8 128 55-211 1-146 (361)
41 PRK07318 dipeptidase PepV; Rev 99.2 2.7E-10 5.9E-15 126.3 15.8 126 54-213 14-167 (466)
42 PRK13381 peptidase T; Provisio 99.2 3.6E-10 7.7E-15 123.0 15.9 137 56-226 3-196 (404)
43 TIGR01882 peptidase-T peptidas 99.2 4.8E-10 1E-14 122.4 16.2 128 54-210 3-187 (410)
44 PRK07522 acetylornithine deace 99.2 4.1E-10 8.9E-15 121.3 15.5 140 55-227 5-166 (385)
45 PRK15026 aminoacyl-histidine d 99.2 6.7E-10 1.5E-14 123.8 17.7 138 51-227 7-171 (485)
46 TIGR01892 AcOrn-deacetyl acety 99.2 3.9E-10 8.4E-15 120.4 15.1 137 59-228 2-158 (364)
47 PRK00466 acetyl-lysine deacety 99.2 4E-10 8.6E-15 120.1 15.0 129 53-228 9-149 (346)
48 PRK08652 acetylornithine deace 99.2 4.2E-10 9.1E-15 119.3 15.0 131 54-227 2-144 (347)
49 KOG2275 Aminoacylase ACY1 and 99.2 7.1E-10 1.5E-14 117.5 16.4 146 51-229 26-194 (420)
50 PRK13009 succinyl-diaminopimel 99.2 5.7E-10 1.2E-14 119.8 15.9 138 56-227 4-164 (375)
51 PRK07205 hypothetical protein; 99.2 5E-10 1.1E-14 123.4 15.7 128 52-213 9-165 (444)
52 PRK08651 succinyl-diaminopimel 99.1 7.7E-10 1.7E-14 119.6 16.5 149 53-228 5-173 (394)
53 COG4882 Predicted aminopeptida 99.1 2.1E-10 4.5E-15 118.7 11.2 155 128-308 178-344 (486)
54 PRK06156 hypothetical protein; 99.1 1.3E-09 2.8E-14 122.7 18.5 136 54-226 46-213 (520)
55 PRK05111 acetylornithine deace 99.1 8.9E-10 1.9E-14 118.7 16.5 140 54-226 5-169 (383)
56 PRK13007 succinyl-diaminopimel 99.1 9.5E-10 2.1E-14 117.0 16.0 134 53-227 6-156 (352)
57 KOG2526 Predicted aminopeptida 99.1 2.1E-09 4.6E-14 113.4 18.1 199 124-326 189-416 (555)
58 PRK08554 peptidase; Reviewed 99.1 1.4E-09 2.9E-14 120.0 16.4 140 56-228 3-166 (438)
59 COG0624 ArgE Acetylornithine d 99.1 1.2E-09 2.5E-14 119.0 15.4 142 56-226 15-180 (409)
60 TIGR01886 dipeptidase dipeptid 99.1 1.1E-09 2.5E-14 121.5 14.7 126 54-213 13-166 (466)
61 TIGR01246 dapE_proteo succinyl 99.1 1.9E-09 4.2E-14 115.6 15.5 135 58-226 3-160 (370)
62 COG1363 FrvX Cellulase M and r 99.1 9.3E-09 2E-13 109.2 19.6 154 162-329 178-348 (355)
63 PRK13004 peptidase; Reviewed 99.1 3.1E-09 6.8E-14 115.4 16.3 135 54-227 15-172 (399)
64 PF01546 Peptidase_M20: Peptid 99.0 1.5E-09 3.2E-14 104.6 10.6 166 148-325 1-188 (189)
65 TIGR01902 dapE-lys-deAc N-acet 99.0 3.9E-09 8.5E-14 111.9 13.8 125 59-228 2-138 (336)
66 TIGR01900 dapE-gram_pos succin 99.0 5.9E-09 1.3E-13 112.5 14.9 135 60-228 2-171 (373)
67 TIGR01887 dipeptidaselike dipe 99.0 8E-09 1.7E-13 114.2 15.0 124 55-212 3-154 (447)
68 TIGR03106 trio_M42_hydro hydro 99.0 3.8E-08 8.2E-13 105.1 19.4 145 162-324 181-339 (343)
69 TIGR01891 amidohydrolases amid 98.9 3.4E-08 7.3E-13 106.0 15.6 133 58-228 3-152 (363)
70 TIGR03526 selenium_YgeY putati 98.9 4.1E-08 8.9E-13 106.6 15.8 134 54-226 13-169 (395)
71 TIGR03320 ygeY M20/DapE family 98.9 3.4E-08 7.5E-13 107.1 15.2 134 54-226 13-169 (395)
72 TIGR03107 glu_aminopep glutamy 98.9 1.6E-07 3.4E-12 100.5 19.9 146 162-327 176-341 (350)
73 PRK09961 exoaminopeptidase; Pr 98.9 1.5E-07 3.3E-12 100.6 19.6 153 161-327 163-333 (344)
74 PRK08737 acetylornithine deace 98.8 2.7E-08 5.9E-13 107.1 13.7 132 53-228 5-157 (364)
75 PRK09864 putative peptidase; P 98.8 4.4E-07 9.5E-12 97.1 19.4 146 162-327 173-341 (356)
76 PLN02693 IAA-amino acid hydrol 98.7 1.9E-07 4E-12 103.1 15.4 123 58-212 47-183 (437)
77 PLN02280 IAA-amino acid hydrol 98.7 3.7E-07 7.9E-12 101.8 16.2 135 56-223 95-243 (478)
78 COG4187 RocB Arginine degradat 98.7 1.7E-07 3.7E-12 99.8 12.0 158 50-229 4-209 (553)
79 COG4310 Uncharacterized protei 98.5 1.3E-06 2.9E-11 89.4 13.0 195 98-329 152-355 (435)
80 KOG2276 Metalloexopeptidases [ 98.4 2.7E-06 5.8E-11 90.1 12.0 140 53-212 15-180 (473)
81 PF05343 Peptidase_M42: M42 gl 98.0 2E-05 4.3E-10 82.5 9.1 131 162-306 132-282 (292)
82 KOG2657 Transmembrane glycopro 97.9 6.8E-05 1.5E-09 81.6 11.1 187 126-313 155-374 (596)
83 COG1473 AbgB Metal-dependent a 96.8 0.026 5.7E-07 61.5 14.9 139 56-226 10-164 (392)
84 COG2195 PepD Di- and tripeptid 96.0 0.02 4.3E-07 62.7 7.9 149 52-225 3-203 (414)
85 PF04114 Gaa1: Gaa1-like, GPI 94.4 0.3 6.4E-06 55.2 11.2 97 128-233 3-113 (504)
86 PRK02256 putative aminopeptida 82.5 1.9 4E-05 48.3 5.2 46 160-209 256-301 (462)
87 PTZ00371 aspartyl aminopeptida 80.0 8.2 0.00018 43.3 9.2 51 160-210 247-298 (465)
88 KOG3566 Glycosylphosphatidylin 71.8 32 0.00069 39.3 10.8 75 128-212 120-194 (617)
89 PRK02813 putative aminopeptida 65.6 5.4 0.00012 44.3 3.3 137 160-310 230-414 (428)
90 PRK02813 putative aminopeptida 49.2 72 0.0016 35.5 8.6 63 78-157 22-89 (428)
91 PRK13755 putative mercury tran 48.8 1.1E+02 0.0025 28.0 8.2 35 408-445 38-72 (139)
92 COG1362 LAP4 Aspartyl aminopep 41.6 47 0.001 36.7 5.5 72 74-157 20-91 (437)
93 PTZ00371 aspartyl aminopeptida 38.1 1.3E+02 0.0029 33.8 8.6 68 78-157 23-91 (465)
94 PF05313 Pox_P21: Poxvirus P21 27.6 2.7E+02 0.0059 27.3 7.6 42 495-536 121-163 (189)
95 PF04253 TFR_dimer: Transferri 24.4 9.6 0.00021 34.6 -2.8 51 355-406 2-57 (125)
96 PRK10263 DNA translocase FtsK; 21.0 8.2E+02 0.018 31.4 11.7 30 398-428 61-90 (1355)
97 COG3152 Predicted membrane pro 20.8 1.7E+02 0.0037 26.9 4.7 20 535-554 72-93 (125)
98 PF01102 Glycophorin_A: Glycop 20.4 1.6E+02 0.0034 27.1 4.3 32 7-38 62-93 (122)
No 1
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=1.3e-95 Score=815.57 Aligned_cols=526 Identities=27% Similarity=0.478 Sum_probs=464.1
Q ss_pred HHhhccCCCC--C-CCCCcCcccHHHHHHHHHHHHHhcCCCCCCChhHH-HHHHHHHHHHhcccccCCCc-eeEEEEeee
Q 007484 33 IVHLKFVKPL--D-SDAPLDRFSEARAIQHVRVLADEIGDRQEGRPGLR-EAAVYIKTQLEGIKERAGPK-FRIEIEENV 107 (602)
Q Consensus 33 ~~~~~~~~p~--~-~~~~~~~Fs~era~~~L~~La~~ig~R~~gS~~~e-~a~~yL~~~l~~ig~~~~~~-~~vevd~~~ 107 (602)
+.+.+.|.|+ + +++.+++|+++||++++++++ ++|||++||++|| .+++|+++|+++++...+.+ +++|+|.|.
T Consensus 33 ~~~~~~~~pl~~~~e~~~~~~f~~~rA~~~l~~ls-~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~ 111 (834)
T KOG2194|consen 33 YLFDHLPEPLTQPQEQTLPSQFSEARALKDLLSLS-AAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQS 111 (834)
T ss_pred HHHhhccccCCCcchhcCchhhHHHHHHHHHHHHH-hcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheeceee
Confidence 3444444444 3 334478999999999999999 7999999999999 99999999999999876543 689999999
Q ss_pred ecCccccccccccccccccccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCC
Q 007484 108 VNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPP 187 (602)
Q Consensus 108 ~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~ 187 (602)
.+|+|.. +.++++|++++||++|+++++. ..+.+++++||+||||++|||+||++|||+|||++|++.+.....+
T Consensus 112 ~sg~~~~----~~~~~~Y~~i~NIvVki~~k~~-~~~~~lLlnaHfDSvpt~~gAtDDg~~va~mLe~lRv~s~~~~~l~ 186 (834)
T KOG2194|consen 112 ASGSFIL----EGMTLVYQNISNIVVKISPKNG-NDKNALLLNAHFDSVPTGPGATDDGSGVASMLEALRVLSKSDKLLT 186 (834)
T ss_pred ccceeee----hhhhheeeeeeeEEEecCCCCC-CccceeeeeccccccCCCCCCCcchhHHHHHHHHHHHhhcCCCccc
Confidence 9998844 6788999999999999999864 3445999999999999999999999999999999999999877789
Q ss_pred CCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccCCCCCCceEEecCCCCChhhhhhhhhccccccccccccc--
Q 007484 188 RPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGGLDLVCQSGPSSWPSSVYAQSAIYPMAHSAAQDVF-- 265 (602)
Q Consensus 188 ~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G~gg~~~lfq~gp~~~~~~~y~~~~~~p~~~~~~~e~f-- 265 (602)
|+|+|+||++||.+++|||+|++||||+++|+++||||++|+||++++||+||++|+++.|.++++||++++++||+|
T Consensus 187 ~~vVFLfNgaEE~~L~gsH~FItQH~w~~~~ka~INLea~GsGGreiLFQagp~~wl~k~Y~~~~phPf~stlgee~Fq~ 266 (834)
T KOG2194|consen 187 HSVVFLFNGAEESGLLGSHAFITQHPWSKNIKAVINLEAAGSGGREILFQAGPNHWLLKAYLQAAPHPFASTLGEELFQS 266 (834)
T ss_pred ccEEEEecCcccchhhhcccceecChhhhhhheEEeccccCcccceeEEecCCchHHHHHHHhhCCCchhhhhHHHhhhc
Confidence 999999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred CCCCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhhhh
Q 007484 266 PVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSSKLQNAHDRASFEAT 345 (602)
Q Consensus 266 ~~ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~a~~l~~~~~~~~~~~~ 345 (602)
|.+||+|||++|+ +|+|+||+|+++..|++.|||++|.++++.++++||+|+|++++++.++|+ ++.+.+++
T Consensus 267 g~IpSdTDfrif~-eyg~l~GLD~A~~~Ng~vYHTk~D~~~~i~~gs~q~tGen~L~~v~~lan~-el~~~~~~------ 338 (834)
T KOG2194|consen 267 GIIPSDTDFRIFR-EYGHLPGLDMAFVKNGYVYHTKYDGIQYIPPGSLQHTGENILALVRSLANS-ELDNSTER------ 338 (834)
T ss_pred CcCccccchHHHH-HhCCcccceeeeeeccceEEeecccccccCcchhhhhhhHHHHHHHHHhch-hhcccccc------
Confidence 8999999999996 699999999999999999999999999999999999999999999999998 67654443
Q ss_pred cCCCCCCCeeEccchhHhhhHccHHHHHHHHhhHHHHhhccceEEEEecccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 007484 346 GIKNTDERAIFFDYLTWFMIYYSRSRATVLHGIPIVIFITVPFFLRLLNSGLHSWFATYSDFVKGMMIHATGKMLAIIFP 425 (602)
Q Consensus 346 ~~~~~~~~~V~fd~lg~~~v~y~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (602)
.++ .||||++|++++.|+++++++||.++.... +++.-+.... + ++.|...+.++++++++++++|
T Consensus 339 ----~~g-~vyfdv~g~~~~~y~~~~~~iLNi~i~~~i------~l~~~~~g~~--~-~~~f~~~~~~~i~s~~~~~~l~ 404 (834)
T KOG2194|consen 339 ----SKG-TVYFDVVGKYFLAYSESTGVILNITICISI------WLMSLRSGSS--Q-LGKFILACLLQILSIVVAIGLP 404 (834)
T ss_pred ----CCC-ceehhhhhhhhheeehhhhhhhhhhhhhhh------hhhhhcccch--h-hhhHHHHHHHHHHHHHHHHhhH
Confidence 345 999999999999999999999994333221 1221111111 2 7888999999999999999999
Q ss_pred HHHHHHHHHhcCCeeeeechhhHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhhhhcccccc-hhHHHHHHHHHHHHHH
Q 007484 426 IAFSVLRLLFSGYAMSWFAHPFLAFMMFIPCSLLGLLIPRSLWSHFPLSQDAMLLKTSKEALS-DEARFWGAFGFYAMLT 504 (602)
Q Consensus 426 ~~~a~~~~~~~~~~m~w~s~~~l~~~ly~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~ 504 (602)
+++|++++.+ +.+|+||++||+++++|.||+++|+.+++.+|.++.| +.+.+.. ..+.+.|. ++++|+
T Consensus 405 ~~~a~~l~~v-~l~~sw~s~p~l~~~ly~~p~~~gl~~~~~~y~~~~~--------~~~~~~~~~~ql~~h~--~l~~l~ 473 (834)
T KOG2194|consen 405 VLVALFLDWV-GLPLSWFSNPWLLLGLYYLPSLFGLAILQALYAKRSK--------RHSLEYLQHDQLLLHS--LLSILL 473 (834)
T ss_pred HHHHHHhhcc-cccceeecchHHHHHHHHhHHHHHhhHHHHHHHhhcc--------ccccchhhHHHHHHHH--HHHHHH
Confidence 9999988876 7799999999999999999999999999999877654 2222222 23555555 889999
Q ss_pred HHHHHhhhhHHHHHHHHHHHhHHHHHHHHHhhhhcCCCceeEEE----EeeccccchhhhHHhhccccccccc------c
Q 007484 505 MAYLVAGLTGGFLTFIVATSMLPAWIFFCISINFYGRRSLRVLR----TRYCSGSSSWCCNWLVCGPSFTNLW------S 574 (602)
Q Consensus 505 ~~~~~~g~~s~y~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~~~~~~~~~p~------~ 574 (602)
+++|++||||+|+++++++|++++.+ +++.++++.++..|... |++|+. +.+|.++.++.+|+|| +
T Consensus 474 ~~~t~y~I~S~y~~~~~~~~~v~~~~-~~~~~~l~~~~~~~~~~~~i~~~~p~~---~~ay~~~~~~~~fipm~Gr~g~~ 549 (834)
T KOG2194|consen 474 IIMTYYGIRSAYLPLLLLLFYVISYL-LNTLTILHLCGTLYLITLLICQVGPFL---FAAYSTYSLVRTFIPMMGRFGNA 549 (834)
T ss_pred HHheecccchhHHHHHHHHHHHHHHH-HhhceeeccCCceeeeeeeeeehHhHH---HHHHHHHHHHHeeeccccccCCC
Confidence 99999999999999999999999998 56889999999988886 999999 9999999999999999 6
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhhhhc
Q 007484 575 LASQVICPAVFVASDCACLGALITVLS 601 (602)
Q Consensus 575 ~~pd~~ia~~~~~~~~~~~g~~~p~~~ 601 (602)
+|||.+||.++++++.++++|++|++.
T Consensus 550 ~nPd~~i~~~~~~~~~l~~~f~i~l~~ 576 (834)
T KOG2194|consen 550 SNPDLSISFLNAFGANLIVGFLIPLVH 576 (834)
T ss_pred CCchHHHHHHHHHHHHhhHHHHHHHHH
Confidence 999999999999999999999999985
No 2
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.96 E-value=5.2e-28 Score=253.91 Aligned_cols=260 Identities=18% Similarity=0.189 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccc--cccccccce
Q 007484 53 EARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSI--SLGYRNHTN 130 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~--~~~y~~~~N 130 (602)
.+-+.++++.++..+++|..||++++++++||.++++++| ++++++.... .|.. ..... ........|
T Consensus 30 ~~~a~~~~~~ia~~~~gR~~gS~~E~~aA~yL~~~f~~lG------~~v~~q~f~~--~~~~--~~~~g~~~~~~~~g~n 99 (346)
T PRK10199 30 GDFANTQARHIATFFPGRMTGSPAEMLSADYLRQQFQQMG------YQSDIRTFNS--RYIY--TARDNRKNWHNVTGST 99 (346)
T ss_pred cchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHCC------CceEeeeccc--ccee--ecccccccccCCccce
Confidence 4457789999998999999999999999999999999999 4555433211 0000 00000 001234679
Q ss_pred EEEEEeCCCCCCCCCEEEEeeecCCCCC--------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeC
Q 007484 131 IVMRISSTDSQDTDPSVLMNGHFDGPLS--------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNG 196 (602)
Q Consensus 131 Vi~~i~g~~~~~~~~~vll~aH~Dsv~~--------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~ 196 (602)
||++++|+. ++.|++++|+|||+. .|||.||++|+|+|||++|.|++. +++++|.|++++
T Consensus 100 VIa~~~G~~----~~~Ill~AH~DTV~p~~~~~~~~~~~g~~~~GA~DnasGvA~lLe~ar~l~~~--~~~~~I~fv~~~ 173 (346)
T PRK10199 100 VIAAHEGKA----PQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAERLKNV--PTEYGIRFVATS 173 (346)
T ss_pred EEEEECCCC----CCeEEEEEEcCcCCCCCCCccccCCCCcccCCccccHHHHHHHHHHHHHHhhC--CCCCcEEEEEEC
Confidence 999998853 367999999999852 479999999999999999999865 578899999999
Q ss_pred cccCCccchHHHHhhcCc--cCceeEEEEeccCCCCCCceEEecCCCC--Ch---hhhhhhhhccccccccc-----ccc
Q 007484 197 AEELFMLGAHGFMKAHKW--RDSVGAVINVEASGTGGLDLVCQSGPSS--WP---SSVYAQSAIYPMAHSAA-----QDV 264 (602)
Q Consensus 197 aEE~gl~GS~~f~~~h~~--~~~i~a~INLD~~G~gg~~~lfq~gp~~--~~---~~~y~~~~~~p~~~~~~-----~e~ 264 (602)
+||.|+.||+.|+++.+. .+++.++||+|+.+.++ ...+-.|... .. .+..........+..+. +..
T Consensus 174 ~EE~Gl~GS~~~~~~~~~~~~~~~~~~iNlD~~~~~d-~~~~~~g~~~~~~~~~~~~d~~~~~a~~~g~~~~~~~~~~~~ 252 (346)
T PRK10199 174 GEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGD-KLYFNSGVNTPEAVRKLTRDRALAIARRHGIAATTNPGLNKN 252 (346)
T ss_pred CcccCcHHHHHHHHhcCccchhcEEEEEEeccCCCCC-ceEEecCCCcHHHHhHHHHHHHHHHHHHcCCccccCCCcccc
Confidence 999999999999987542 47899999999998754 4445444321 11 00001111111111111 111
Q ss_pred c-CCCCCCCchHHHhhcCCCCcEEEEEeec-------------------CCCcCC-CcccccCCCCHH-------HHHHH
Q 007484 265 F-PVIPGDTDYRIFSQDYGDIPGLDIIFLI-------------------GGYYYH-TSHDTVDRLLPG-------SVQAR 316 (602)
Q Consensus 265 f-~~ips~tD~~~F~~~~~GIPgld~a~~~-------------------~~~~YH-T~~Dt~d~id~~-------~lq~~ 316 (602)
+ ......|||.+|.+ .|||.+.+.... +|..|| |.+|+.|++|+. .+...
T Consensus 253 ~p~g~~~rSDH~~F~~--~GIP~l~~~a~n~~~g~~d~~~q~~~~~~~~~g~~~h~~~~d~~~~l~~~~pgri~~~~~~~ 330 (346)
T PRK10199 253 YPKGTGCCNDAEVFDK--AGIPVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDV 330 (346)
T ss_pred ccCCCcCCcccHHHHh--cCCCeEEeeccccccCCcccceecccCccCCCCccccCcCcchHHHHHHhcchHHHHHHHhH
Confidence 1 01224799999987 799999763221 134789 899999999753 56677
Q ss_pred HHHHHHHHHHHhCCc
Q 007484 317 GDNLFNVLKAFSNSS 331 (602)
Q Consensus 317 g~~~l~l~~~la~a~ 331 (602)
.+.++.++++|+++.
T Consensus 331 ~~~~~~~~~~~~~~~ 345 (346)
T PRK10199 331 VRIMLPLVKELAKAS 345 (346)
T ss_pred HHHHHHHHHHHhccC
Confidence 888899999998763
No 3
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=99.96 E-value=1.1e-29 Score=244.97 Aligned_cols=168 Identities=34% Similarity=0.454 Sum_probs=129.8
Q ss_pred CEEEEeeecCCCC------CCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhh-cCccCc
Q 007484 145 PSVLMNGHFDGPL------SSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKA-HKWRDS 217 (602)
Q Consensus 145 ~~vll~aH~Dsv~------~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~-h~~~~~ 217 (602)
++|+++|||||++ .++||+||++||++|||++|.|++.+.+|+++|+|+||++||.|+.||++|+++ +.+.++
T Consensus 1 e~ivi~aH~Ds~~~~~~~~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~~~~~~~~~~~ 80 (179)
T PF04389_consen 1 EYIVIGAHYDSVGGDADGSWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAFVEHDHEELDN 80 (179)
T ss_dssp EEEEEEEE--BESCCC-TCSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHHHHHHHCHHHH
T ss_pred CEEEEEeecCCCCCcCCCcccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHHHHhhhccccc
Confidence 3699999999987 789999999999999999999999777889999999999999999999999973 356799
Q ss_pred eeEEEEeccCCCCCCceEEecCCC-CChhhhhhhhhccccccccccccc--CCCCCCCchHHHhhcCCCCcEEEEEeec-
Q 007484 218 VGAVINVEASGTGGLDLVCQSGPS-SWPSSVYAQSAIYPMAHSAAQDVF--PVIPGDTDYRIFSQDYGDIPGLDIIFLI- 293 (602)
Q Consensus 218 i~a~INLD~~G~gg~~~lfq~gp~-~~~~~~y~~~~~~p~~~~~~~e~f--~~ips~tD~~~F~~~~~GIPgld~a~~~- 293 (602)
+.++||+|++|.+++....+..+. ++..+.+.+....++......+.. ...+..|||.+|.+ .|||++.+....
T Consensus 81 ~~~~inlD~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sD~~~F~~--~gip~~~~~~~~~ 158 (179)
T PF04389_consen 81 IAAVINLDMIGSGDPTVYSEGSPSLPSRLEAYLSSFKQPYGSSLGPDVPPEKPTFGGSDHYPFSK--AGIPAVTLSSTDG 158 (179)
T ss_dssp EEEEEEECSSBSSSSEEEEEEGGGHHHHHHHHHHHHHHHHHCHTSSECEEEESSTTSSTCHHHHT--TT-EEEEEEESSS
T ss_pred ceeEEeccccccCcccceeeeeccccchhhhhhhhhhhhhhcccccccccccCCCCCCCcHhhhc--CCEeEEEEEecCC
Confidence 999999999999988888877662 221222223333344433333332 23456899999974 899999998877
Q ss_pred CCCcCCCcccccCCCCHHHHH
Q 007484 294 GGYYYHTSHDTVDRLLPGSVQ 314 (602)
Q Consensus 294 ~~~~YHT~~Dt~d~id~~~lq 314 (602)
..+.|||+.||+|++|+++||
T Consensus 159 ~~~~~Ht~~Dt~~~~~~~~l~ 179 (179)
T PF04389_consen 159 YNPYYHTPEDTPDNLDPDTLQ 179 (179)
T ss_dssp SGTTTTSTT-SGGGC-HHHH-
T ss_pred CCCCCCCcccChhhcCCccCC
Confidence 667999999999999999987
No 4
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=99.95 E-value=4e-28 Score=273.96 Aligned_cols=276 Identities=25% Similarity=0.251 Sum_probs=195.8
Q ss_pred ccccccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHH---hcCCCCCCCEEEEEeCccc
Q 007484 123 LGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTI---DSGWIPPRPIIFLFNGAEE 199 (602)
Q Consensus 123 ~~y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~---~~~~~p~~~I~flf~~aEE 199 (602)
.....++||+++|+|+ +++|++|++++|+|||. +||.|+++|++.++|++|.+. +.||+|+|+|+|++|+|||
T Consensus 333 ~~~~ki~NIig~I~Gs--~epD~~ViigahrDSw~--~Ga~dp~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F~sWdAeE 408 (702)
T KOG2195|consen 333 REETKIQNIIGKIEGS--EEPDRYVIIGAHRDSWT--FGAIDPNSGTALLLEIARALSKLKKRGWRPRRTILFASWDAEE 408 (702)
T ss_pred eeeeeeeeEEEEEecC--cCCCeEEEEeccccccc--cCCcCCCccHHHHHHHHHHHHHHHHcCCCccceEEEEEccchh
Confidence 3456789999999996 47899999999999999 899999999999999999974 5689999999999999999
Q ss_pred CCccchHHHHhhc--CccCceeEEEEeccCCCCCCceEEecCCCCChhhhh---hhhhcccccccccccccCCCCCCCch
Q 007484 200 LFMLGAHGFMKAH--KWRDSVGAVINVEASGTGGLDLVCQSGPSSWPSSVY---AQSAIYPMAHSAAQDVFPVIPGDTDY 274 (602)
Q Consensus 200 ~gl~GS~~f~~~h--~~~~~i~a~INLD~~G~gg~~~lfq~gp~~~~~~~y---~~~~~~p~~~~~~~e~f~~ips~tD~ 274 (602)
.|+.||..|++++ ....++.++||+|+++.++.++..+++|. +.+.. .+..+.|........+-.. .++|||
T Consensus 409 fGliGStE~~E~~~~~L~~~av~yin~d~~~~~~~~l~~~~~Pl--L~~li~~~~k~~~~p~~~~~~~~v~~~-g~~Sd~ 485 (702)
T KOG2195|consen 409 FGLLGSTEWAEEYLKNLKSRAVVYINVDNAVLGDYTLHVKTTPL--LTDLIEEAAKSVLSPDKGDQSNRVLSL-GGGSDY 485 (702)
T ss_pred ccccccHHHHHHHHHHhhheeEEEEeccccccCCceeEEecCcc--HHHHHHHHHhccCCCCccccceeEecc-CCCCcc
Confidence 9999999999988 34689999999999999888888888874 33222 2334444322221122233 789999
Q ss_pred HHHhhcCCCCcEEEEEeecCCCcCCCcccccCCC----CHHHHH--HHHHHHHHHHHHHhCCcccc-cchhhh-------
Q 007484 275 RIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRL----LPGSVQ--ARGDNLFNVLKAFSNSSKLQ-NAHDRA------- 340 (602)
Q Consensus 275 ~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~i----d~~~lq--~~g~~~l~l~~~la~a~~l~-~~~~~~------- 340 (602)
.+|. +|.|||+++++|...-++|||.+||++.+ |+.--+ .++.++...+-.+++.+.++ |.+++.
T Consensus 486 ~~F~-~~~GIpsv~~~f~~~yP~yhs~~dt~~~~~k~~D~~~~~~~~~a~~~~~~~l~l~~d~llPfd~~~Y~~~l~~~~ 564 (702)
T KOG2195|consen 486 ASFL-QFAGIPSVDFAFNRTYPFYHSTYDTYEWLDKLLDPKFKQHLAAAGVLGLELLILADDPLLPFDISDYADVLLKTL 564 (702)
T ss_pred hhhc-cccCcceeeeeecCCcceeecccCcHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCccccCcHHHHHHHHHHHH
Confidence 9998 48999999999999777999999995554 555333 33444444444445544444 433331
Q ss_pred -hhhhhcC---CCCCCCeeEccchhHhhhHccHHHHHHHHhhHHHHhhccceEEEEecccchhhhhhHHHH
Q 007484 341 -SFEATGI---KNTDERAIFFDYLTWFMIYYSRSRATVLHGIPIVIFITVPFFLRLLNSGLHSWFATYSDF 407 (602)
Q Consensus 341 -~~~~~~~---~~~~~~~V~fd~lg~~~v~y~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (602)
.+++... .........|+....++..++. ....+...........|..++..|+++|..||.|++.
T Consensus 565 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~er~f~~p 634 (702)
T KOG2195|consen 565 PKLEELSPDKVNFLLTIQGLFSWRLDALKAAEW-ESSELSSRFSHGDKIEPSKLRPNNDRLMLIERTFLDP 634 (702)
T ss_pred HHHHhhcccccchhhHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccccccccccccccHHHHHhHHhhcCc
Confidence 1111111 1122334455666666666666 3334444444444555666777799999999987654
No 5
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=2.5e-19 Score=178.70 Aligned_cols=248 Identities=17% Similarity=0.218 Sum_probs=177.7
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceE
Q 007484 52 SEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNI 131 (602)
Q Consensus 52 s~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NV 131 (602)
+-.|.++.|.-+- -+|++||+++.++++||.+.+++++ +.+|.|....++ ...+....|+
T Consensus 49 ~~~~~~~~L~p~l---v~Rvpgs~g~~~vr~~i~~~l~~l~------w~ve~~~f~~~t-----------p~g~~~f~ni 108 (338)
T KOG3946|consen 49 DWNRLWENLLPIL---VPRVPGSPGSRQVRRFIIQHLRNLG------WAVETDAFTDNT-----------PLGTRNFNNL 108 (338)
T ss_pred CHHHHHHhhhhhh---ccccCCCCccHHHHHHHHHHHHhcC------ceeeeccccccC-----------cceeeeeeeE
Confidence 4456666665554 3899999999999999999999997 788887665443 1245678899
Q ss_pred EEEEeCCCCCCCCCEEEEeeecCCCCCC----CCCCCChhHHHHHHHHHHHHHhc----CCCCCCCEEEEEeCccc----
Q 007484 132 VMRISSTDSQDTDPSVLMNGHFDGPLSS----PGAGDCGSCVASMLELARLTIDS----GWIPPRPIIFLFNGAEE---- 199 (602)
Q Consensus 132 i~~i~g~~~~~~~~~vll~aH~Dsv~~~----pGA~D~~sGva~~LE~ar~L~~~----~~~p~~~I~flf~~aEE---- 199 (602)
++++..+ .++++++.|||||.... -||.|.+..||.|++++|.+.+. ...++-++.++|++|||
T Consensus 109 i~tl~~~----A~r~lVlachydsk~~p~~~~vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf~e 184 (338)
T KOG3946|consen 109 IATLDPN----ASRYLVLACHYDSKIFPGGMFVGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAFEE 184 (338)
T ss_pred EEecCCC----cchheeeecccccccCCCcceEeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHHhh
Confidence 9999864 45789999999997532 48999999999999999999653 23456789999999999
Q ss_pred ----CCccchHHHHhhc------C-----ccCceeEEEEeccCCCCCCce--EEecCCCCChhhhh---hhhhccccccc
Q 007484 200 ----LFMLGAHGFMKAH------K-----WRDSVGAVINVEASGTGGLDL--VCQSGPSSWPSSVY---AQSAIYPMAHS 259 (602)
Q Consensus 200 ----~gl~GS~~f~~~h------~-----~~~~i~a~INLD~~G~gg~~~--lfq~gp~~~~~~~y---~~~~~~p~~~~ 259 (602)
..+.||++.+++. + ..+++...+-+|-.|+.++++ .|..+ +.|..+.- .+...-....+
T Consensus 185 W~p~DSlYGsRhLA~~~~sw~~~~~r~~~~ld~idl~vLldllga~~p~f~~~~~~t-~~wF~Rl~~iE~~l~~~g~l~s 263 (338)
T KOG3946|consen 185 WGPEDSLYGSRHLAAKWESWPHSGIRGDLLLDGIDLLVLLDLLGAPNPTFYNFFPNT-DRWFHRLQSIEGELALLGLLAS 263 (338)
T ss_pred cCCccccchHHHHHHHHhccCCCCCccccccccchHhhhHHHhcCCChhHhhcCcch-HHHHHHHHHHHHHHHHHHHHHh
Confidence 3678999998862 2 236777788888888877764 12111 12332211 11110000001
Q ss_pred ccccc--c--CCCC--CCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHHH
Q 007484 260 AAQDV--F--PVIP--GDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKA 326 (602)
Q Consensus 260 ~~~e~--f--~~ip--s~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~ 326 (602)
-..+. | +... -+.||.||.+ .|+|.+.+.......+|||+.|+..++|..+..+++..+..++-+
T Consensus 264 ~r~~~~~Fq~~~~~~~veDDHiPFlr--rgVPVLHlI~~pFPsvWHt~dD~e~nldy~tt~~~~lilr~Fv~e 334 (338)
T KOG3946|consen 264 HRLPPRYFQPGGLSSVVEDDHIPFLR--RGVPVLHLIPVPFPSVWHTPDDNERNLDYATTDNLALIIRVFVAE 334 (338)
T ss_pred ccCCchhccccCccccccCCcchhhh--cCCceEEecCCCCcccccCccchhhcCCchhHHHHHHHHHHHHHH
Confidence 11111 2 1111 2789999997 799999987777777999999999999999999998877766543
No 6
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=99.74 E-value=1.2e-17 Score=182.88 Aligned_cols=190 Identities=25% Similarity=0.307 Sum_probs=133.5
Q ss_pred cccceEEEEEeCCC--------CCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCc
Q 007484 126 RNHTNIVMRISSTD--------SQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGA 197 (602)
Q Consensus 126 ~~~~NVi~~i~g~~--------~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~a 197 (602)
.+..|++++++++. ....++.+++++|+|+++.+|||.||++|++++||++|.|++. +|+++|+|+++++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~GA~DNasGva~llEiAr~l~~~--~p~~~v~f~~~~a 259 (435)
T COG2234 182 LTSKNVAATISGSSQIIEAIIGTAHSDSLGLLGAHIDSVPTGPGADDNASGVAALLELARVLKGN--PPKRTVRFVAFGA 259 (435)
T ss_pred eEEEEEeeeeecccccceEEEeccCCCceeeecccccCCcCCCCcccccHHHHHHHHHHHHHhcC--CCCceEEEEEecc
Confidence 35567777776651 1235688999999999999999999999999999999999976 4999999999999
Q ss_pred ccCCccchHHHHhhcC--ccCceeEEEEeccCCCCCCceEEec--CCCCChhhhhhhhhccccccccccccc-CCCCCCC
Q 007484 198 EELFMLGAHGFMKAHK--WRDSVGAVINVEASGTGGLDLVCQS--GPSSWPSSVYAQSAIYPMAHSAAQDVF-PVIPGDT 272 (602)
Q Consensus 198 EE~gl~GS~~f~~~h~--~~~~i~a~INLD~~G~gg~~~lfq~--gp~~~~~~~y~~~~~~p~~~~~~~e~f-~~ips~t 272 (602)
||.|+.||+.|+.++. ..+++..+||+|+.|..++.-.++. .+.+.......+.. ..++..... .+ ......+
T Consensus 260 EE~Gl~GS~~~~~~~~~~~~~~~~~viN~Dm~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~s 337 (435)
T COG2234 260 EESGLLGSEAYVKRLSKDLDKKIALVINLDMLGSPNPTPTLILYGNGLERVPPGLRAVA-ALIGRPVDP-STVQDFDPRS 337 (435)
T ss_pred hhhcccccHHHHhcCCcchhhhhheEEecccccCCCCCcceEEeccCCccccchHHHHH-HHHHhhccc-cccCCCCCCC
Confidence 9999999999999775 3578888999999999763222222 11111111111000 001111100 11 2234589
Q ss_pred chHHHhhcCCCCcEEEEEeecCC-----CcCCCcccccCCCCHHHHHHHHHHHHHH
Q 007484 273 DYRIFSQDYGDIPGLDIIFLIGG-----YYYHTSHDTVDRLLPGSVQARGDNLFNV 323 (602)
Q Consensus 273 D~~~F~~~~~GIPgld~a~~~~~-----~~YHT~~Dt~d~id~~~lq~~g~~~l~l 323 (602)
||.+|.+ +|+|++.+...... .++||..|| ++ |..++++.+..+...
T Consensus 338 d~~~f~~--~gi~~~~~~~~~~~~~~~~~~~~t~~d~-~~-d~~~~~~~~~~~~~~ 389 (435)
T COG2234 338 DHYPFTE--AGIPSLFLFSGAPGGVEAVAWGHTAADT-DK-DLSTLDQHGDAVAAT 389 (435)
T ss_pred cchhhhh--cCCcceeeeecCCccccccccccccccc-cc-chhhhcccchhhhhh
Confidence 9999986 89999877654433 389999999 88 877777777544443
No 7
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=99.54 E-value=5.1e-14 Score=153.42 Aligned_cols=127 Identities=17% Similarity=0.151 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHhcC-------CCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccccccccccccccc
Q 007484 54 ARAIQHVRVLADEIG-------DRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYR 126 (602)
Q Consensus 54 era~~~L~~La~~ig-------~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~ 126 (602)
.|.++.+++|+ +|| .|...|+++.++++|+.++++++| +++++|.
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~G------l~v~~D~--------------------- 54 (406)
T TIGR03176 3 KHFRQAIEELS-SFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESG------LETRFDD--------------------- 54 (406)
T ss_pred HHHHHHHHHHh-ccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcC------CEEEEcC---------------------
Confidence 47889999998 575 366778999999999999999999 5665542
Q ss_pred ccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCC-----
Q 007484 127 NHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELF----- 201 (602)
Q Consensus 127 ~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~g----- 201 (602)
..|++++++|+++ +.+.|++++|+||||. .|..|+..||++.||++|.|++.+.+|+++|.+++|.+||.+
T Consensus 55 -~gN~~~~~~g~~~--~~~~i~~gsHlDtv~~-gG~~dg~~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~ 130 (406)
T TIGR03176 55 -VGNLYGRLVGTEF--PEETILTGSHIDTVVN-GGNLDGQFGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYV 130 (406)
T ss_pred -CCcEEEEecCCCC--CCCeEEEeccccCCCC-CCccCchhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcc
Confidence 3599999999753 4578999999999996 578899999999999999999998999999999999999986
Q ss_pred ccchHHHHhhc
Q 007484 202 MLGAHGFMKAH 212 (602)
Q Consensus 202 l~GS~~f~~~h 212 (602)
+.||+.+..+.
T Consensus 131 ~~Gs~~~~g~~ 141 (406)
T TIGR03176 131 FWGSKNIFGLA 141 (406)
T ss_pred cccHHHHhCCC
Confidence 99999998643
No 8
>PRK09133 hypothetical protein; Provisional
Probab=99.48 E-value=1e-12 Score=145.76 Aligned_cols=152 Identities=22% Similarity=0.231 Sum_probs=116.9
Q ss_pred cCcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccc
Q 007484 48 LDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRN 127 (602)
Q Consensus 48 ~~~Fs~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~ 127 (602)
.+++..+++.+.+++|. +|.+- .++.+++++.+|+.++++++|.+. ..+++++. ..+
T Consensus 31 ~~~~~~~~~~~~l~~Lv-~i~S~-s~~~~e~~~~~~l~~~l~~~G~~~---~~~~~~~~------------------~~~ 87 (472)
T PRK09133 31 APTADQQAARDLYKELI-EINTT-ASTGSTTPAAEAMAARLKAAGFAD---ADIEVTGP------------------YPR 87 (472)
T ss_pred CcchhHHHHHHHHHHHh-ccCCC-CCCcchHHHHHHHHHHHHHcCCCc---eEEEeccC------------------CCC
Confidence 35677888999999998 55542 222345589999999999998432 11232210 112
Q ss_pred cceEEEEEeCCCCCCCCCEEEEeeecCCCCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCC
Q 007484 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLS--------------------SPGAGDCGSCVASMLELARLTIDSGWIPP 187 (602)
Q Consensus 128 ~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~--------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~ 187 (602)
..|++++++|+++ .+.|++++|+|+||. ++|+.|+++|++++|++++.|++.+.+++
T Consensus 88 ~~nli~~~~g~~~---~~~lll~~H~DtVp~~~~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~ 164 (472)
T PRK09133 88 KGNLVARLRGTDP---KKPILLLAHMDVVEAKREDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPK 164 (472)
T ss_pred ceeEEEEecCCCC---CCcEEEEeecccCCCChhcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCC
Confidence 3699999987542 356999999999974 57999999999999999999998887889
Q ss_pred CCEEEEEeCccc-CCccchHHHHhhcCccCceeEEEEecc
Q 007484 188 RPIIFLFNGAEE-LFMLGAHGFMKAHKWRDSVGAVINVEA 226 (602)
Q Consensus 188 ~~I~flf~~aEE-~gl~GS~~f~~~h~~~~~i~a~INLD~ 226 (602)
++|.|++..+|| .|..|++.++++++...+..++|+ |.
T Consensus 165 ~~i~~~~~~dEE~~g~~G~~~l~~~~~~~~~~~~~i~-e~ 203 (472)
T PRK09133 165 RDIILALTGDEEGTPMNGVAWLAENHRDLIDAEFALN-EG 203 (472)
T ss_pred CCEEEEEECccccCccchHHHHHHHHhhccCeEEEEE-CC
Confidence 999999999999 899999999987653335678888 85
No 9
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=99.47 E-value=5.3e-13 Score=145.71 Aligned_cols=129 Identities=24% Similarity=0.252 Sum_probs=107.8
Q ss_pred cccHHHHHHHHHHHHHhcCC-------CCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccccccccccc
Q 007484 50 RFSEARAIQHVRVLADEIGD-------RQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSIS 122 (602)
Q Consensus 50 ~Fs~era~~~L~~La~~ig~-------R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~ 122 (602)
+++.+|.++.+++|+ .||. |...|+++.++++||.+++++.| ++++.+.
T Consensus 6 ~~~~~~~~~~~~~~~-~~~~~~~~g~~r~~~~~~e~~~~~~l~~~l~~~G------~~v~~~~----------------- 61 (414)
T PRK12891 6 RVDGERLWASLERMA-QIGATPKGGVCRLALTDGDREARDLFVAWARDAG------CTVRVDA----------------- 61 (414)
T ss_pred ccCHHHHHHHHHHHH-hccCCCCCceeeccCCHHHHHHHHHHHHHHHHCC------CEEEECC-----------------
Confidence 345679999999999 5752 77788888899999999999999 5555531
Q ss_pred ccccccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCC-
Q 007484 123 LGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELF- 201 (602)
Q Consensus 123 ~~y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~g- 201 (602)
..|++++++|+++ +.+.|++++|+|+||. .|..|+++|++++++++|.|++.+.+++++|.++++.+||.+
T Consensus 62 -----~gNl~a~~~g~~~--~~~~l~~~~H~DtVp~-gg~~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~ 133 (414)
T PRK12891 62 -----MGNLFARRAGRDP--DAAPVMTGSHADSQPT-GGRYDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSR 133 (414)
T ss_pred -----CCCEEEEecCCCC--CCCeEEEEecccCCCC-CccccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCc
Confidence 2399999988532 3478999999999995 367899999999999999999998899999999999999985
Q ss_pred ----ccchHHHHh
Q 007484 202 ----MLGAHGFMK 210 (602)
Q Consensus 202 ----l~GS~~f~~ 210 (602)
+.||+.+..
T Consensus 134 f~~~~~Gs~~~~g 146 (414)
T PRK12891 134 FAPSMVGSGVFFG 146 (414)
T ss_pred CCcccccHHHHhC
Confidence 579987753
No 10
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=99.47 E-value=5.9e-13 Score=145.20 Aligned_cols=128 Identities=21% Similarity=0.277 Sum_probs=107.1
Q ss_pred cHHHHHHHHHHHHHhcC------CCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccc
Q 007484 52 SEARAIQHVRVLADEIG------DRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGY 125 (602)
Q Consensus 52 s~era~~~L~~La~~ig------~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y 125 (602)
+.+++++++.+|+ +|+ .|+..|+++.++++||.++|++.| ++++.+.
T Consensus 7 ~~~~~~~~~~~~~-~i~~~~~~~~~~s~~~~e~~~~~~l~~~l~~~G------~~~~~~~-------------------- 59 (414)
T PRK12890 7 NGERLLARLEELA-AIGRDGPGWTRLALSDEERAARALLAAWMRAAG------LEVRRDA-------------------- 59 (414)
T ss_pred CHHHHHHHHHHHh-ccCCCCCceeeccCCHHHHHHHHHHHHHHHHCC------CEEEEcC--------------------
Confidence 4689999999999 565 456778888899999999999998 5555421
Q ss_pred cccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccC-----
Q 007484 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEEL----- 200 (602)
Q Consensus 126 ~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~----- 200 (602)
..|++++++|+++ +.+.|++++|+|+||. .|..|+++|++++|++++.|.+.+.+++++|.|+++.+||.
T Consensus 60 --~~nlia~~~g~~~--~~~~l~~~~H~DtVp~-~g~~D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~ 134 (414)
T PRK12890 60 --AGNLFGRLPGRDP--DLPPLMTGSHLDTVPN-GGRYDGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGP 134 (414)
T ss_pred --CCcEEEEeCCCCC--CCCEEEEeCcccCCCC-CCCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCC
Confidence 2399999987532 3467999999999995 47789999999999999999988888899999999999997
Q ss_pred CccchHHHHhh
Q 007484 201 FMLGAHGFMKA 211 (602)
Q Consensus 201 gl~GS~~f~~~ 211 (602)
++.||+.+...
T Consensus 135 ~~~G~~~~~~~ 145 (414)
T PRK12890 135 SMIGSRALAGT 145 (414)
T ss_pred ccccHHHHHcc
Confidence 67899888764
No 11
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=99.45 E-value=8.7e-13 Score=143.39 Aligned_cols=126 Identities=23% Similarity=0.249 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHhcCC-------CCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccc
Q 007484 55 RAIQHVRVLADEIGD-------RQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRN 127 (602)
Q Consensus 55 ra~~~L~~La~~ig~-------R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~ 127 (602)
|.++.+.+++ .+|. |...|+++.++++||.+++++.| ++++++.
T Consensus 2 ~~~~~~~~~~-~~~~~~~~g~~r~~~~~~e~~~~~~l~~~~~~~G------~~~~~~~---------------------- 52 (401)
T TIGR01879 2 RLWETLMWLG-EVGADPAGGMTRLALSPEDREAQDLFKKRMRAAG------LEVRFDE---------------------- 52 (401)
T ss_pred hHHHHHHHHh-cccCCCCCceEeCCCCHHHHHHHHHHHHHHHHCC------CEEEEec----------------------
Confidence 6788899998 5653 44557888899999999999999 5555432
Q ss_pred cceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccC-----Cc
Q 007484 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEEL-----FM 202 (602)
Q Consensus 128 ~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~-----gl 202 (602)
..||+++++|+++ +.+.|++++|+|+||. .|..|+..|++++|+++|.|++.+.+|+++|.|+++.+||. ++
T Consensus 53 ~~nl~a~~~g~~~--~~~~l~~~~H~DtV~~-gg~~dg~~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~ 129 (401)
T TIGR01879 53 VGNLIGRKEGTEP--PLEVVLSGSHIDTVVN-GGNFDGQLGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGM 129 (401)
T ss_pred CCcEEEEecCCCC--CCCEEEEecccccCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCccccc
Confidence 1499999988642 3478999999999996 47889999999999999999999989999999999999997 88
Q ss_pred cchHHHHhhc
Q 007484 203 LGAHGFMKAH 212 (602)
Q Consensus 203 ~GS~~f~~~h 212 (602)
.||+.+..+.
T Consensus 130 ~Gs~~~~~~~ 139 (401)
T TIGR01879 130 WGSRNMVGLA 139 (401)
T ss_pred ccHHHHhccc
Confidence 9999998654
No 12
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=99.44 E-value=9e-13 Score=150.07 Aligned_cols=127 Identities=18% Similarity=0.136 Sum_probs=107.1
Q ss_pred cHHHHHHHHHHHHHhcCC----------CCCCChhHHHHHHHHHHHHhcccccCCCce-eEEEEeeeecCcccccccccc
Q 007484 52 SEARAIQHVRVLADEIGD----------RQEGRPGLREAAVYIKTQLEGIKERAGPKF-RIEIEENVVNGSFNMIFLGHS 120 (602)
Q Consensus 52 s~era~~~L~~La~~ig~----------R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~-~vevd~~~~~G~~~~~~~~~~ 120 (602)
-.+|.++.+.+|+ +|+. |...|++..++++|+.++++++| + ++++|.
T Consensus 179 ~~~r~~~~~~~l~-~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~G------l~~v~~D~--------------- 236 (591)
T PRK13590 179 LGNDVWDWAERLA-AHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCG------FDEVHIDA--------------- 236 (591)
T ss_pred HHHHHHHHHHHHh-cccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcC------CCeeeECC---------------
Confidence 4578999999999 5643 44558899999999999999999 5 455442
Q ss_pred ccccccccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccC
Q 007484 121 ISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEEL 200 (602)
Q Consensus 121 ~~~~y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~ 200 (602)
..|++++++|+++ +.+.|++++|+|||+. .|..|+..||+++||++|.|++.+.+++++|.+++|.+||.
T Consensus 237 -------~GNl~~~~~g~~~--~~~~v~~gsHlDTV~~-gG~~DG~~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg 306 (591)
T PRK13590 237 -------VGNVVGRYKGSTP--QAKRLLTGSHYDTVRN-GGKYDGRLGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEG 306 (591)
T ss_pred -------CCCEEEEecCCCC--CCCeEEEecccccCCC-CCCcccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCcc
Confidence 3599999998643 3467999999999995 47789999999999999999999988899999999999997
Q ss_pred -----CccchHHHHh
Q 007484 201 -----FMLGAHGFMK 210 (602)
Q Consensus 201 -----gl~GS~~f~~ 210 (602)
++.||+.+..
T Consensus 307 ~rF~~~~~GS~~~~G 321 (591)
T PRK13590 307 QRYKATFLGSGALIG 321 (591)
T ss_pred ccCCccccchHHHhC
Confidence 5999998765
No 13
>PRK08596 acetylornithine deacetylase; Validated
Probab=99.43 E-value=2.8e-12 Score=140.31 Aligned_cols=146 Identities=22% Similarity=0.236 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEE
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~ 133 (602)
+++.+.+++|. +|.+-.....+++++++||.++|+++| ++++.++.. ....|+++
T Consensus 13 ~~~~~~l~~Lv-~i~S~s~~~~~e~~~a~~l~~~l~~~G------~~~~~~~~~------------------~~~~nvia 67 (421)
T PRK08596 13 DELLELLKTLV-RFETPAPPARNTNEAQEFIAEFLRKLG------FSVDKWDVY------------------PNDPNVVG 67 (421)
T ss_pred HHHHHHHHHHh-cCCCCCCCchhHHHHHHHHHHHHHHCC------CeEEEEEcc------------------CCCceEEE
Confidence 56777888887 444421111244478999999999998 555543211 12359999
Q ss_pred EEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 007484 134 RISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (602)
Q Consensus 134 ~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~f 192 (602)
+++|+++ ...+.|++++|+|+||. ++|+.|+++|++++|++++.+++.+.+++.+|.|
T Consensus 68 ~~~g~~~-~~~~~lll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~ 146 (421)
T PRK08596 68 VKKGTES-DAYKSLIINGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIF 146 (421)
T ss_pred EecCCCC-CCCcEEEEeccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 9987532 22357999999999864 4799999999999999999999888888899999
Q ss_pred EEeCcccCCccchHHHHhhcCccCceeEEEEeccCC
Q 007484 193 LFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 193 lf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
+|.++||.|..|++.++++.. +.+.+|+.|..+
T Consensus 147 ~~~~dEE~g~~G~~~~~~~~~---~~d~~i~~ep~~ 179 (421)
T PRK08596 147 QSVIGEEVGEAGTLQCCERGY---DADFAVVVDTSD 179 (421)
T ss_pred EEEeccccCCcCHHHHHhcCC---CCCEEEECCCCC
Confidence 999999999999999988642 457788888643
No 14
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=99.43 E-value=1.7e-12 Score=141.60 Aligned_cols=130 Identities=27% Similarity=0.294 Sum_probs=107.4
Q ss_pred ccHHHHHHHHHHHHHhcCC-------CCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccc
Q 007484 51 FSEARAIQHVRVLADEIGD-------RQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISL 123 (602)
Q Consensus 51 Fs~era~~~L~~La~~ig~-------R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~ 123 (602)
.+++|+.+++++|. ++|+ |+..|.++.++++||.++|+++| ++++++.
T Consensus 4 ~~~~~~~~~~~~l~-~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g------~~~~~~~------------------ 58 (413)
T PRK09290 4 IDAERLWARLDELA-KIGATPDGGVTRLALSPEDLQARDLFAEWMEAAG------LTVRVDA------------------ 58 (413)
T ss_pred cCHHHHHHHHHHHh-cccCCCCCceeeccCCHHHHHHHHHHHHHHHHcC------CEEEEcC------------------
Confidence 45789999999999 6754 55777777799999999999998 5554421
Q ss_pred cccccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccC---
Q 007484 124 GYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEEL--- 200 (602)
Q Consensus 124 ~y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~--- 200 (602)
..|++++++|.++ +.+.|++++|+|+||. .|..|++.|+|+++++++.|.+.+.+++++|.|+++.+||.
T Consensus 59 ----~~nl~a~~~g~~~--~~~~l~l~gH~DtVp~-~g~~d~k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~ 131 (413)
T PRK09290 59 ----VGNLFGRLEGRDP--DAPAVLTGSHLDTVPN-GGRFDGPLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRF 131 (413)
T ss_pred ----CCcEEEEecCCCC--CCCEEEEecCccCCCC-CCCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccc
Confidence 2499999977421 2467999999999995 46789999999999999999998888899999999999998
Q ss_pred --CccchHHHHhhc
Q 007484 201 --FMLGAHGFMKAH 212 (602)
Q Consensus 201 --gl~GS~~f~~~h 212 (602)
|+.|++.+++++
T Consensus 132 g~~~~G~~~~~~~~ 145 (413)
T PRK09290 132 GPAMLGSRVFTGAL 145 (413)
T ss_pred cCccccHHHHHccc
Confidence 578999888654
No 15
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=99.42 E-value=9.7e-13 Score=149.74 Aligned_cols=127 Identities=17% Similarity=0.167 Sum_probs=111.3
Q ss_pred cHHHHHHHHHHHHHhcC----------CCCCCChhHHHHHHHHHHHHhcccccCCCcee-EEEEeeeecCcccccccccc
Q 007484 52 SEARAIQHVRVLADEIG----------DRQEGRPGLREAAVYIKTQLEGIKERAGPKFR-IEIEENVVNGSFNMIFLGHS 120 (602)
Q Consensus 52 s~era~~~L~~La~~ig----------~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~-vevd~~~~~G~~~~~~~~~~ 120 (602)
..+|.++.+.+|+ +|| .|...|+++.++++|+.+++++.| ++ +++|.
T Consensus 179 ~~~r~~~~l~~l~-~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~G------l~~v~~D~--------------- 236 (591)
T PRK13799 179 IGADVMDWAEDIA-AHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAG------FDEVEIDA--------------- 236 (591)
T ss_pred HHHHHHHHHHHHH-hccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcC------CCeEeECC---------------
Confidence 6789999999999 676 266778899999999999999999 54 66653
Q ss_pred ccccccccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccC
Q 007484 121 ISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEEL 200 (602)
Q Consensus 121 ~~~~y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~ 200 (602)
..||+++++|+++ +.+.|++++|+|||+. .|.-|+..||+++||++|.|++.+.+++++|.++.|.+||.
T Consensus 237 -------~gNv~~~~~g~~~--~~p~v~~gSHlDTV~~-gG~~DG~~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg 306 (591)
T PRK13799 237 -------VGNVVGRYKAADD--DAKTLITGSHYDTVRN-GGKYDGREGIFLAIACVKELHEQGERLPFHFEVIAFAEEEG 306 (591)
T ss_pred -------CCCEEEEcCCCCC--CCCeEEEeccccccCC-CCccccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCc
Confidence 3599999998753 3578999999999995 68889999999999999999999999999999999999997
Q ss_pred -----CccchHHHHh
Q 007484 201 -----FMLGAHGFMK 210 (602)
Q Consensus 201 -----gl~GS~~f~~ 210 (602)
++.||+.+..
T Consensus 307 ~rF~~~~~GS~~~~G 321 (591)
T PRK13799 307 QRFKATFLGSGALIG 321 (591)
T ss_pred cCCCccccchHHHhC
Confidence 8999999975
No 16
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=99.42 E-value=5.7e-12 Score=137.46 Aligned_cols=144 Identities=19% Similarity=0.280 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCC-hhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEE
Q 007484 54 ARAIQHVRVLADEIGDRQEGR-PGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS-~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi 132 (602)
+++.+.+++|. +|.+ ..+. ++++++.+||.++|+++| ++++.+.... ....|++
T Consensus 37 ~~~~~~l~~lv-~i~S-~s~~~~~~~~~~~~l~~~L~~~G------~~v~~~~~~~-----------------~~~~~li 91 (410)
T PRK06133 37 PAYLDTLKELV-SIES-GSGDAEGLKQVAALLAERLKALG------AKVERAPTPP-----------------SAGDMVV 91 (410)
T ss_pred HHHHHHHHHHH-cCCC-CCCCHHHHHHHHHHHHHHHHhCC------CeEEEEccCC-----------------CCCCeEE
Confidence 35566666776 4533 2232 334589999999999998 4554432110 1235999
Q ss_pred EEEeCCCCCCCCCEEEEeeecCCCCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEe
Q 007484 133 MRISSTDSQDTDPSVLMNGHFDGPLS-----------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFN 195 (602)
Q Consensus 133 ~~i~g~~~~~~~~~vll~aH~Dsv~~-----------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~ 195 (602)
++++|++ .+.|++.+|+|+||. ++|+.|+++|++++|++++.|++.+.+++.+|+|+|.
T Consensus 92 a~~~g~~----~~~ill~~H~D~Vp~~~~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~ 167 (410)
T PRK06133 92 ATFKGTG----KRRIMLIAHMDTVYLPGMLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFN 167 (410)
T ss_pred EEECCCC----CceEEEEeecCccCCCCccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 9997742 357999999999974 4689999999999999999999887777889999999
Q ss_pred CcccCCccchHHHHhhcCccCceeEEEEeccCC
Q 007484 196 GAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 196 ~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
.+||.|..|++.++++.. .+...+++.|...
T Consensus 168 ~dEE~g~~G~~~~~~~~~--~~~d~~i~~ep~~ 198 (410)
T PRK06133 168 PDEETGSPGSRELIAELA--AQHDVVFSCEPGR 198 (410)
T ss_pred CCcccCCccHHHHHHHHh--ccCCEEEEeCCCC
Confidence 999999999999998653 3567888888543
No 17
>PRK07473 carboxypeptidase; Provisional
Probab=99.41 E-value=6e-12 Score=135.82 Aligned_cols=150 Identities=19% Similarity=0.205 Sum_probs=114.2
Q ss_pred ccHHHHHHHHHHHHHhcCCCCCCChh-HHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccc
Q 007484 51 FSEARAIQHVRVLADEIGDRQEGRPG-LREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHT 129 (602)
Q Consensus 51 Fs~era~~~L~~La~~ig~R~~gS~~-~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~ 129 (602)
++.+++.+.|++|. +|.+.. +.++ .++..+|+.++|+++| +++++.+... | ...
T Consensus 8 ~~~~~~~~~l~~Lv-~i~S~s-~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~-~----------------~~~ 62 (376)
T PRK07473 8 FDSEAMLAGLRPWV-ECESPT-WDAAAVNRMLDLAARDMAIMG------ATIERIPGRQ-G----------------FGD 62 (376)
T ss_pred cCHHHHHHHHHHHh-cCCCCC-CCHHHHHHHHHHHHHHHHHcC------CeEEEecCCC-C----------------CCC
Confidence 45788999999999 666643 3333 3478899999999998 5555432110 1 124
Q ss_pred eEEEEEeCCCCCCCCCEEEEeeecCCCCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 007484 130 NIVMRISSTDSQDTDPSVLMNGHFDGPLS-----------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (602)
Q Consensus 130 NVi~~i~g~~~~~~~~~vll~aH~Dsv~~-----------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~f 192 (602)
|+++++++.+ ...+.|++++|+|+|+. ++|+.|+++|++++|.+++.+.+.+.+++.+|.|
T Consensus 63 ~~~~~~~~~~--~~~~~lll~gH~DtV~~~~~~~~~p~~~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~ 140 (376)
T PRK07473 63 CVRARFPHPR--QGEPGILIAGHMDTVHPVGTLEKLPWRREGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITV 140 (376)
T ss_pred eEEEEeCCCC--CCCCeEEEEecCCCCCCCCCccCCCeEEECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 8999997532 23467999999999952 5799999999999999999998877666778999
Q ss_pred EEeCcccCCccchHHHHhhcCccCceeEEEEeccCCC
Q 007484 193 LFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGT 229 (602)
Q Consensus 193 lf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G~ 229 (602)
+|+++||.|..|++.+++++.. +.+++|..|..+.
T Consensus 141 ~~~~dEE~g~~g~~~~~~~~~~--~~d~~iv~ep~~~ 175 (376)
T PRK07473 141 LFTPDEEVGTPSTRDLIEAEAA--RNKYVLVPEPGRP 175 (376)
T ss_pred EEeCCcccCCccHHHHHHHhhc--cCCEEEEeCCCCC
Confidence 9999999999999999986532 4578899997653
No 18
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=99.38 E-value=5.6e-12 Score=137.23 Aligned_cols=129 Identities=22% Similarity=0.243 Sum_probs=106.4
Q ss_pred ccHHHHHHHHHHHHHhcCC------CCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccccccccccccc
Q 007484 51 FSEARAIQHVRVLADEIGD------RQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLG 124 (602)
Q Consensus 51 Fs~era~~~L~~La~~ig~------R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~ 124 (602)
.+.+|+++.+++|+ +++. |++.|+++.++++||.++|+++| ++++++
T Consensus 7 ~~~~~~~~~~~~~~-~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G------~~~~~~-------------------- 59 (412)
T PRK12892 7 IDGQRVLDDLMELA-AIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAG------LAVRID-------------------- 59 (412)
T ss_pred ccHHHHHHHHHHHH-ccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcC------CEEEEc--------------------
Confidence 45679999999999 6764 35556766799999999999998 555542
Q ss_pred ccccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccC----
Q 007484 125 YRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEEL---- 200 (602)
Q Consensus 125 y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~---- 200 (602)
...|++++++|+++ .+.|++++|+|+||. .|-.|+..|++++|++++.+++.+.+++++|.|+++.+||.
T Consensus 60 --~~~nl~a~~~g~~~---~~~l~l~gH~DtVp~-~g~~dg~~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~ 133 (412)
T PRK12892 60 --GIGNVFGRLPGPGP---GPALLVGSHLDSQNL-GGRYDGALGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFT 133 (412)
T ss_pred --CCCcEEEEecCCCC---CCeEEEEccccCCCC-CCcccchHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCccccccc
Confidence 12399999988542 367999999999995 36679999999999999999998888999999999999998
Q ss_pred -CccchHHHHhhc
Q 007484 201 -FMLGAHGFMKAH 212 (602)
Q Consensus 201 -gl~GS~~f~~~h 212 (602)
++.||+.++.++
T Consensus 134 ~~~~Gs~~~~~~~ 146 (412)
T PRK12892 134 PGFLGSRAYAGRL 146 (412)
T ss_pred CccccHHHHHcCC
Confidence 578999998643
No 19
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=99.37 E-value=5.9e-12 Score=137.12 Aligned_cols=129 Identities=29% Similarity=0.301 Sum_probs=105.9
Q ss_pred cHHHHHHHHHHHHHhcCC-------CCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccccccccccccc
Q 007484 52 SEARAIQHVRVLADEIGD-------RQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLG 124 (602)
Q Consensus 52 s~era~~~L~~La~~ig~-------R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~ 124 (602)
+.+++.+++++|. +|.+ |..+|.++.++.+||.++|++.| ++++++.
T Consensus 8 ~~~~~~~~l~~l~-~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G------~~~~~~~------------------- 61 (412)
T PRK12893 8 NGERLWDSLMALA-RIGATPGGGVTRLALTDEDREARDLLAQWMEEAG------LTVSVDA------------------- 61 (412)
T ss_pred CHHHHHHHHHHHh-cccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcC------CEEEEcC-------------------
Confidence 5688999999999 5663 44557777799999999999998 5555421
Q ss_pred ccccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCC---
Q 007484 125 YRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELF--- 201 (602)
Q Consensus 125 y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~g--- 201 (602)
..|++++++|++ ++.+.|++++|+|+||. .|..|+++|++++|++++.|++.+.+++++|+|+|+.+||.|
T Consensus 62 ---~~n~~a~~~g~~--~~~~~l~l~~H~DtVp~-~g~~dgk~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~ 135 (412)
T PRK12893 62 ---IGNLFGRRAGTD--PDAPPVLIGSHLDTQPT-GGRFDGALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFA 135 (412)
T ss_pred ---CCcEEEEeCCCC--CCCCEEEEEecccCCCC-CCcccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccc
Confidence 139999998753 13467999999999994 567899999999999999999988888999999999999986
Q ss_pred --ccchHHHHhhc
Q 007484 202 --MLGAHGFMKAH 212 (602)
Q Consensus 202 --l~GS~~f~~~h 212 (602)
+.|+..+..++
T Consensus 136 ~~~~G~~~~~~~~ 148 (412)
T PRK12893 136 PAMLGSGVFTGAL 148 (412)
T ss_pred cccccHHHHhCcC
Confidence 88998888654
No 20
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.35 E-value=2.1e-11 Score=133.24 Aligned_cols=155 Identities=18% Similarity=0.104 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEE
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~ 133 (602)
+++.+.+++|. ++.+-.....+++++.+||.++|+++| +++++.+. .+. +....+....|+++
T Consensus 14 ~~~~~~l~~Lv-~i~S~~~~g~~e~~~~~~l~~~l~~~G------~~~~~~~~--~~~--------~~~~~~~~~~nlia 76 (427)
T PRK13013 14 DDLVALTQDLI-RIPTLNPPGRAYREICEFLAARLAPRG------FEVELIRA--EGA--------PGDSETYPRWNLVA 76 (427)
T ss_pred HHHHHHHHHHh-cCCCcCCCCccHHHHHHHHHHHHHHCC------CceEEEec--CCC--------CcccccCCcceEEE
Confidence 45677788887 554321111233589999999999999 45554321 110 00011223579999
Q ss_pred EEeCCCCCCCCCEEEEeeecCCCCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEE
Q 007484 134 RISSTDSQDTDPSVLMNGHFDGPLS-------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLF 194 (602)
Q Consensus 134 ~i~g~~~~~~~~~vll~aH~Dsv~~-------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf 194 (602)
+++|++ +++.|++.+|+|+||. ++|+.|+++|++++|.+++.|++.+.+++++|+|+|
T Consensus 77 ~~~g~~---~~~~i~l~gH~DvVp~~~~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~ 153 (427)
T PRK13013 77 RRQGAR---DGDCVHFNSHHDVVEVGHGWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISG 153 (427)
T ss_pred EecCCC---CCCEEEEEeccccCCCCCCCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEE
Confidence 998753 3467999999999974 469999999999999999999988778889999999
Q ss_pred eCcccCCccchHHHHhhcCccC--ceeEEEEeccCC
Q 007484 195 NGAEELFMLGAHGFMKAHKWRD--SVGAVINVEASG 228 (602)
Q Consensus 195 ~~aEE~gl~GS~~f~~~h~~~~--~i~a~INLD~~G 228 (602)
..+||.|..|...++.+....+ ++.++|..|..+
T Consensus 154 ~~dEE~g~~~g~~~l~~~~~~~~~~~d~~i~~ep~~ 189 (427)
T PRK13013 154 TADEESGGFGGVAYLAEQGRFSPDRVQHVIIPEPLN 189 (427)
T ss_pred EeccccCChhHHHHHHhcCCccccCCCEEEEecCCC
Confidence 9999998765554444343322 567788777543
No 21
>PRK07338 hypothetical protein; Provisional
Probab=99.35 E-value=1.7e-11 Score=133.08 Aligned_cols=156 Identities=17% Similarity=0.165 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCC-hhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEE
Q 007484 54 ARAIQHVRVLADEIGDRQEGR-PGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS-~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi 132 (602)
++..+.|.+|. ++.+- .+. ++.+++++||.++|+++| +++++.+... ... .+..+. ........|++
T Consensus 17 ~~~~~~l~~lv-~i~S~-s~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~-~~~-~~~~~~--~~~~~~~~nl~ 84 (402)
T PRK07338 17 APMLEQLIAWA-AINSG-SRNLDGLARMAELLADAFAALP------GEIELIPLPP-VEV-IDADGR--TLEQAHGPALH 84 (402)
T ss_pred HHHHHHHHHHH-hccCC-CCCHHHHHHHHHHHHHHHHhCC------CcEEEecCCc-ccc-cccccc--ccccCcCCeEE
Confidence 55667777777 44431 122 334589999999999999 4444432110 000 000000 00112336999
Q ss_pred EEEeCCCCCCCCCEEEEeeecCCCCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEe
Q 007484 133 MRISSTDSQDTDPSVLMNGHFDGPLS-----------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFN 195 (602)
Q Consensus 133 ~~i~g~~~~~~~~~vll~aH~Dsv~~-----------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~ 195 (602)
++++|+. ++.|++++|+|+||. ++|+.|+++|++++|++++.|.+.+.+++.++.|+|.
T Consensus 85 a~~~~~~----~~~lll~gH~DvVp~~~~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~~ 160 (402)
T PRK07338 85 VSVRPEA----PRQVLLTGHMDTVFPADHPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVLIN 160 (402)
T ss_pred EEECCCC----CccEEEEeecCccCCCCCcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEE
Confidence 9996532 235999999999974 4689999999999999999998877777889999999
Q ss_pred CcccCCccchHHHHhhcCccCceeEEEEeccC
Q 007484 196 GAEELFMLGAHGFMKAHKWRDSVGAVINVEAS 227 (602)
Q Consensus 196 ~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~ 227 (602)
.+||.|..|++.+++++. .+..+.+.+|..
T Consensus 161 ~dEE~g~~g~~~~~~~~~--~~~~~~i~~ep~ 190 (402)
T PRK07338 161 PDEEIGSPASAPLLAELA--RGKHAALTYEPA 190 (402)
T ss_pred CCcccCChhhHHHHHHHh--ccCcEEEEecCC
Confidence 999999999999998764 245677888864
No 22
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=99.34 E-value=1.5e-11 Score=132.20 Aligned_cols=146 Identities=21% Similarity=0.239 Sum_probs=107.2
Q ss_pred HHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEEeC
Q 007484 58 QHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISS 137 (602)
Q Consensus 58 ~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g 137 (602)
+.+++|. ++.+....+.++.++++||.++|+++| ++++...... +. .....|+++.++|
T Consensus 2 ~~l~~lv-~i~s~~~~~~~e~~~a~~l~~~l~~~G------~~~~~~~~~~-~~-------------~~~~~~~~~~~~g 60 (375)
T TIGR01910 2 ELLKDLI-SIPSVNPPGGNEETIANYIKDLLREFG------FSTDVIEITD-DR-------------LKVLGKVVVKEPG 60 (375)
T ss_pred hhHHhhh-cCCCCCCCCcCHHHHHHHHHHHHHHCC------CceEEEecCc-hh-------------cccccceEEeccC
Confidence 4566776 444432245566699999999999999 4444432111 10 0112367888777
Q ss_pred CCCCCCCCEEEEeeecCCCCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeC
Q 007484 138 TDSQDTDPSVLMNGHFDGPLSS---------------------PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNG 196 (602)
Q Consensus 138 ~~~~~~~~~vll~aH~Dsv~~~---------------------pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~ 196 (602)
++ +.+.|++.+|+|+||.+ +|+.|+++|++++|++++.|.+.+.+++++|.|+|+.
T Consensus 61 ~~---~~~~ill~~H~DtVp~~~~~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 137 (375)
T TIGR01910 61 NG---NEKSLIFNGHYDVVPAGDLELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVV 137 (375)
T ss_pred CC---CCCEEEEecccccccCCChhhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEc
Confidence 42 24679999999999863 5899999999999999999998777788999999999
Q ss_pred cccCCccchHHHHhhcCccCceeEEEEeccCC
Q 007484 197 AEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 197 aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
+||.|..|++.++++. ..++.+.+|..|..|
T Consensus 138 ~EE~g~~G~~~~~~~~-~~~~~d~~i~~~~~~ 168 (375)
T TIGR01910 138 DEESGEAGTLYLLQRG-YFKDADGVLIPEPSG 168 (375)
T ss_pred CcccCchhHHHHHHcC-CCCCCCEEEECCCCC
Confidence 9999999999999753 334467778778543
No 23
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.34 E-value=2e-11 Score=131.23 Aligned_cols=141 Identities=23% Similarity=0.272 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEE
Q 007484 53 EARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi 132 (602)
+|++.+.+++|. ++.+ -|.++.++++||.++|+++| ++++.++.. ....|++
T Consensus 1 ~~~~~~~l~~Lv-~i~s---~s~~e~~~~~~l~~~l~~~G------~~~~~~~~~------------------~~~~~l~ 52 (377)
T PRK08588 1 EEEKIQILADIV-KINS---VNDNEIEVANYLQDLFAKHG------IESKIVKVN------------------DGRANLV 52 (377)
T ss_pred ChHHHHHHHHHh-cCCC---CCCcHHHHHHHHHHHHHHCC------CceEEEecC------------------CCCceEE
Confidence 367888899888 4443 23345589999999999998 444443211 1235999
Q ss_pred EEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEE
Q 007484 133 MRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPII 191 (602)
Q Consensus 133 ~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~ 191 (602)
+++ |.+ ++.|++.+|+|+||. ++|+.|+++|++++|++++.|.+.+.+++++|.
T Consensus 53 a~~-g~~----~~~il~~~H~DtVp~~~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~ 127 (377)
T PRK08588 53 AEI-GSG----SPVLALSGHMDVVAAGDVDKWTYDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIR 127 (377)
T ss_pred EEe-CCC----CceEEEEeeecccCCCCcccCcCCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEE
Confidence 998 422 267999999999985 368899999999999999999988878889999
Q ss_pred EEEeCcccCCccchHHHHhhcCccCceeEEEEeccC
Q 007484 192 FLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEAS 227 (602)
Q Consensus 192 flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~ 227 (602)
|+|..+||.|..|++.++++ .+.++.++++..|..
T Consensus 128 l~~~~dEE~g~~G~~~~~~~-~~~~~~d~~i~~ep~ 162 (377)
T PRK08588 128 LLATAGEEVGELGAKQLTEK-GYADDLDALIIGEPS 162 (377)
T ss_pred EEEEcccccCchhHHHHHhc-CccCCCCEEEEecCC
Confidence 99999999999999999975 334566677777753
No 24
>PRK07906 hypothetical protein; Provisional
Probab=99.34 E-value=1.3e-11 Score=135.22 Aligned_cols=130 Identities=30% Similarity=0.451 Sum_probs=100.6
Q ss_pred HHHHHHHHHhcCCCCCC---ChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEE
Q 007484 57 IQHVRVLADEIGDRQEG---RPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (602)
Q Consensus 57 ~~~L~~La~~ig~R~~g---S~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~ 133 (602)
.+.+++|. +|.+...+ +++++++++||.++++++| ++++.++.. .+..|+++
T Consensus 2 ~~ll~~Lv-~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G------~~~~~~~~~------------------~~~~nv~~ 56 (426)
T PRK07906 2 VDLCSELI-RIDTTNTGDGTGKGEREAAEYVAEKLAEVG------LEPTYLESA------------------PGRANVVA 56 (426)
T ss_pred hHHHHHHh-cccccCCCCCCCchHHHHHHHHHHHHHhCC------CCeEEeecC------------------CCceEEEE
Confidence 45777887 55553222 2455689999999999999 445443211 12359999
Q ss_pred EEeCCCCCCCCCEEEEeeecCCCCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEE
Q 007484 134 RISSTDSQDTDPSVLMNGHFDGPLS--------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFL 193 (602)
Q Consensus 134 ~i~g~~~~~~~~~vll~aH~Dsv~~--------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~fl 193 (602)
+++|+++ ..+.|++++|+|+||. ++|+.|+++|++++|++++.+++.+.+++++|.|+
T Consensus 57 ~~~g~~~--~~~~lll~~H~DtVp~~~~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~ 134 (426)
T PRK07906 57 RLPGADP--SRPALLVHGHLDVVPAEAADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFA 134 (426)
T ss_pred EEeCCCC--CCCcEEEEcccccCCCCcccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEE
Confidence 9987532 3357999999999974 46999999999999999999998888899999999
Q ss_pred EeCcccCCc-cchHHHHhhcC
Q 007484 194 FNGAEELFM-LGAHGFMKAHK 213 (602)
Q Consensus 194 f~~aEE~gl-~GS~~f~~~h~ 213 (602)
|+.+||.|. .|++.++++++
T Consensus 135 ~~~dEE~g~~~g~~~l~~~~~ 155 (426)
T PRK07906 135 FVADEEAGGTYGAHWLVDNHP 155 (426)
T ss_pred EecCcccchhhhHHHHHHHHH
Confidence 999999864 69999987653
No 25
>PRK08262 hypothetical protein; Provisional
Probab=99.31 E-value=4e-11 Score=133.56 Aligned_cols=134 Identities=19% Similarity=0.214 Sum_probs=102.8
Q ss_pred cCcccHHHHHHHHHHHHHhcCCCCCCChhH-------HHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccccccccc
Q 007484 48 LDRFSEARAIQHVRVLADEIGDRQEGRPGL-------REAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHS 120 (602)
Q Consensus 48 ~~~Fs~era~~~L~~La~~ig~R~~gS~~~-------e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~ 120 (602)
+-..+.+++.+.+++|. +|.+-. +.+++ .+..+||.++++++| +.++... .+
T Consensus 38 ~~~~~~~~~v~~L~~lv-~i~S~s-~~~~~~~~~~~~~~~~~~L~~~~~~~g------~~~~~~~--~~----------- 96 (486)
T PRK08262 38 PVAVDEDAAAERLSEAI-RFRTIS-NRDRAEDDAAAFDALHAHLEESYPAVH------AALEREV--VG----------- 96 (486)
T ss_pred CCcCCHHHHHHHHHHhc-ccceec-cCCCCcccHHHHHHHHHHHHHhChhhh------ceeEEEE--EC-----------
Confidence 34567889999999998 555532 22211 357899999998887 3333321 11
Q ss_pred ccccccccceEEEEEeCCCCCCCCCEEEEeeecCCCCC-----------------------CCCCCCChhHHHHHHHHHH
Q 007484 121 ISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS-----------------------SPGAGDCGSCVASMLELAR 177 (602)
Q Consensus 121 ~~~~y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~-----------------------~pGA~D~~sGva~~LE~ar 177 (602)
..|+++.++|+++ ..+.|++.+|+|+||. ++|+.|+++|++++|.+++
T Consensus 97 -------~~~vv~~~~g~~~--~~~~ill~gH~DvVp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~ 167 (486)
T PRK08262 97 -------GHSLLYTWKGSDP--SLKPIVLMAHQDVVPVAPGTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAE 167 (486)
T ss_pred -------CccEEEEEECCCC--CCCeEEEECcccccCCCCCCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHH
Confidence 1488888887542 2267999999999974 3599999999999999999
Q ss_pred HHHhcCCCCCCCEEEEEeCcccCCccchHHHHhh
Q 007484 178 LTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKA 211 (602)
Q Consensus 178 ~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~ 211 (602)
.+++.+.+++++|.|+|.++||.|..|++.+++.
T Consensus 168 ~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~~~ 201 (486)
T PRK08262 168 ALLAQGFQPRRTIYLAFGHDEEVGGLGARAIAEL 201 (486)
T ss_pred HHHHcCCCCCCeEEEEEecccccCCcCHHHHHHH
Confidence 9998877788999999999999998899988864
No 26
>PRK07907 hypothetical protein; Provisional
Probab=99.31 E-value=4.1e-11 Score=132.25 Aligned_cols=144 Identities=17% Similarity=0.211 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCC---ChhHHHHHHHHHHHHhcccccCCCce-eEEEEeeeecCcccccccccccccccccc
Q 007484 53 EARAIQHVRVLADEIGDRQEG---RPGLREAAVYIKTQLEGIKERAGPKF-RIEIEENVVNGSFNMIFLGHSISLGYRNH 128 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~~g---S~~~e~a~~yL~~~l~~ig~~~~~~~-~vevd~~~~~G~~~~~~~~~~~~~~y~~~ 128 (602)
.+++.+.+++|. +|.+-... ..+.+++++||.++++++| + ++++.+ .. +.
T Consensus 17 ~~~~~~ll~~LV-~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g------~~~~~~~~--~~-----------------~~ 70 (449)
T PRK07907 17 LPRVRADLEELV-RIPSVAADPFRREEVARSAEWVADLLREAG------FDDVRVVS--AD-----------------GA 70 (449)
T ss_pred HHHHHHHHHHHh-cCCCCCCCccchhhHHHHHHHHHHHHHHcC------CceEEEEe--cC-----------------CC
Confidence 356778888887 55542211 1223489999999999998 3 344332 11 23
Q ss_pred ceEEEEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCC
Q 007484 129 TNIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPP 187 (602)
Q Consensus 129 ~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~ 187 (602)
.|++++++|+. +.+.|++++|+|+||. ++|+.|+++|+++++.+++.+ +.+++
T Consensus 71 ~nl~a~~~~~~---~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~~~~ 144 (449)
T PRK07907 71 PAVIGTRPAPP---GAPTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL---GGDLP 144 (449)
T ss_pred CEEEEEecCCC---CCCEEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh---ccCCC
Confidence 59999998742 2467999999999985 369999999999999999999 34567
Q ss_pred CCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccCC
Q 007484 188 RPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 188 ~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
++|.|+++++||.|..|++.++++++...+..++|..|..+
T Consensus 145 ~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~iv~E~~~ 185 (449)
T PRK07907 145 VGVTVFVEGEEEMGSPSLERLLAEHPDLLAADVIVIADSGN 185 (449)
T ss_pred CcEEEEEEcCcccCCccHHHHHHhchHhhcCCEEEEecCCc
Confidence 89999999999999999999998764334567788888644
No 27
>PRK06446 hypothetical protein; Provisional
Probab=99.30 E-value=3.3e-11 Score=132.49 Aligned_cols=143 Identities=21% Similarity=0.298 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEE
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~ 133 (602)
.++.+.+++|. +|.+-..+.++.+++.+||.+.|+++| +++++++. . +..|+++
T Consensus 2 ~~~~~~l~eLV-~i~S~s~~~~~~~~~a~~l~~~l~~~G------~~ve~~~~--~-----------------~~~~lia 55 (436)
T PRK06446 2 DEELYTLIEFL-KKPSISATGEGIEETANYLKDTMEKLG------IKANIERT--K-----------------GHPVVYG 55 (436)
T ss_pred hhHHHHHHHHh-CCCCCCCCcHhHHHHHHHHHHHHHHCC------CeEEEEec--C-----------------CCCEEEE
Confidence 35778888888 555532111233589999999999998 55554421 1 1359999
Q ss_pred EEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 007484 134 RISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (602)
Q Consensus 134 ~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~f 192 (602)
++++. +.+.|++++|+|+||. ++|+.|+++|++++|.+++.+.+.+ +++.+|.|
T Consensus 56 ~~~~~----~~~~vll~gH~DvVp~~~~~~W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i~~ 130 (436)
T PRK06446 56 EINVG----AKKTLLIYNHYDVQPVDPLSEWKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNVKF 130 (436)
T ss_pred EecCC----CCCEEEEEecccCCCCCccccccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCEEE
Confidence 98642 2367999999999873 4699999999999999999887654 56789999
Q ss_pred EEeCcccCCccchHHHHhhcCccCceeEEEEeccCC
Q 007484 193 LFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 193 lf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
+|.++||.|..|++.++++++...+.+++|. |..+
T Consensus 131 ~~~~dEE~g~~g~~~~l~~~~~~~~~d~vi~-E~~~ 165 (436)
T PRK06446 131 LYEGEEEIGSPNLEDFIEKNKNKLKADSVIM-EGAG 165 (436)
T ss_pred EEEcccccCCHhHHHHHHHHHHHhCCCEEEE-CCCC
Confidence 9999999999999999987642223456664 6444
No 28
>PRK09104 hypothetical protein; Validated
Probab=99.30 E-value=7.4e-11 Score=130.70 Aligned_cols=147 Identities=19% Similarity=0.251 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCC---hhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccc
Q 007484 53 EARAIQHVRVLADEIGDRQEGR---PGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHT 129 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~~gS---~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~ 129 (602)
.+++.+.|++|. +|.+-.... ++.+++++||.++++++| +++++.+. . +..
T Consensus 16 ~~~~~~~L~~lv-~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G------~~v~~~~~--~-----------------~~~ 69 (464)
T PRK09104 16 LDASLERLFALL-RIPSISTDPAYAADCRKAADWLVADLASLG------FEASVRDT--P-----------------GHP 69 (464)
T ss_pred HHHHHHHHHHHh-cCCCCCCCccchHHHHHHHHHHHHHHHHCC------CeEEEEec--C-----------------CCC
Confidence 456777888887 454421111 123578999999999998 55554321 1 124
Q ss_pred eEEEEEeCCCCCCCCCEEEEeeecCCCCC--------------------------CCCCCCChhHHHHHHHHHHHHHhcC
Q 007484 130 NIVMRISSTDSQDTDPSVLMNGHFDGPLS--------------------------SPGAGDCGSCVASMLELARLTIDSG 183 (602)
Q Consensus 130 NVi~~i~g~~~~~~~~~vll~aH~Dsv~~--------------------------~pGA~D~~sGva~~LE~ar~L~~~~ 183 (602)
||+++++|+++ ..+.|++++|+|+||. ++|+.|+++|++++|++++.|++.+
T Consensus 70 ~l~a~~~g~~~--~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~ 147 (464)
T PRK09104 70 MVVAHHEGPTG--DAPHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVT 147 (464)
T ss_pred EEEEEecCCCC--CCCEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhc
Confidence 99999987432 3467999999999763 3578999999999999999999876
Q ss_pred CCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccC
Q 007484 184 WIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEAS 227 (602)
Q Consensus 184 ~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~ 227 (602)
.+++.+|.|++.++||.|..|...++.+.....+..++|..|..
T Consensus 148 ~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~iv~E~~ 191 (464)
T PRK09104 148 GSLPVRVTILFEGEEESGSPSLVPFLEANAEELKADVALVCDTG 191 (464)
T ss_pred CCCCCcEEEEEECccccCCccHHHHHHhhHHhcCCCEEEEeCCC
Confidence 66778999999999999999999999864322356889999954
No 29
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=99.29 E-value=1.6e-10 Score=121.39 Aligned_cols=242 Identities=20% Similarity=0.234 Sum_probs=132.1
Q ss_pred cccHHHHHHHHHHHHHh---cCCCCCCC-hhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccc
Q 007484 50 RFSEARAIQHVRVLADE---IGDRQEGR-PGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGY 125 (602)
Q Consensus 50 ~Fs~era~~~L~~La~~---ig~R~~gS-~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y 125 (602)
..+-+..++||..+-+. |..|+.-- +..--.. =.++++++.. .+++|.+|....+|...
T Consensus 56 ~lsl~eL~~Hl~tlp~~PdaIPY~TsYY~~~WGFCl--~~~~~~~L~d---g~Y~V~IdS~l~~G~L~------------ 118 (386)
T PF09940_consen 56 TLSLEELKKHLHTLPDQPDAIPYRTSYYKRRWGFCL--SHNQLDALPD---GEYEVVIDSTLEDGSLT------------ 118 (386)
T ss_dssp EEEHHHHGGGEE--TTSTT--B--B-SSS----EE----HHHHHT--S---SEEEEEEEEEEES-EEE------------
T ss_pred EEeHHHHHhhhccCCCCCCccceeeecccCCccccc--CHHHHhhCCC---CceEEEEeeeecCCcee------------
Confidence 35667777888777532 44443321 1111000 0123333332 34899999888777422
Q ss_pred cccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccch
Q 007484 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGA 205 (602)
Q Consensus 126 ~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS 205 (602)
.--..++|+ .++-|++++|.+|.. -|+||-||++++.+++|.|++. +++.+.+|+|-. +.+||
T Consensus 119 ----ygE~~ipG~----s~~EillsthiCHPs---mANdnLSG~~v~~~La~~L~~~--~~rytYRflf~P----eTIGs 181 (386)
T PF09940_consen 119 ----YGEFVIPGE----SDEEILLSTHICHPS---MANDNLSGPAVLTFLAKWLKQL--PNRYTYRFLFVP----ETIGS 181 (386)
T ss_dssp ----EEEEEE--S----SS-EEEEEEE----S----TTTTHHHHHHHHHHHHHHTTS----SSEEEEEEE-----TTHHH
T ss_pred ----EEEEEecCC----CCCeEEEEEeccCcc---cccccccHHHHHHHHHHHHhcC--CcCceEEEEEcc----ccHHH
Confidence 122556885 346699999999944 5999999999999999999875 455999999997 58999
Q ss_pred HHHHhhcCc--cCceeEEEEeccCCCCCCceEEecCCC-CChh-hhhhhhhcccccccc-cccccCCCCCCCchHHHhhc
Q 007484 206 HGFMKAHKW--RDSVGAVINVEASGTGGLDLVCQSGPS-SWPS-SVYAQSAIYPMAHSA-AQDVFPVIPGDTDYRIFSQD 280 (602)
Q Consensus 206 ~~f~~~h~~--~~~i~a~INLD~~G~gg~~~lfq~gp~-~~~~-~~y~~~~~~p~~~~~-~~e~f~~ips~tD~~~F~~~ 280 (602)
-.|..+|.. .+++++-++|.++|..+ ...++.++. +-.+ ++.. |-....- .-..+...|.++|.|+|..-
T Consensus 182 I~yLskn~~~l~~~v~~G~vLtcvGD~~-~~syk~Sr~g~~~iDr~~~----~vl~~~~~~~~~~~F~~~GsDERQfcSP 256 (386)
T PF09940_consen 182 ITYLSKNLDELKKNVKAGLVLTCVGDDG-AYSYKRSRRGNTLIDRAAA----HVLKHSGPNFKIYDFLPRGSDERQFCSP 256 (386)
T ss_dssp HHHHHH-GGGGGG-EEEEEE--S--SSS--EEEE--TTSSSHHHHHHH----HHHHHSSS-EEEE---S-SSTHHHHTST
T ss_pred HHHHHHCHHHHhhheeeeEEEEEecCCC-CcceecCCCCCcHHHHHHH----HHHHhcCCCceEecccccCCCcceeecC
Confidence 999998843 35599999999999876 444454443 2222 2221 1111110 01223456779999999741
Q ss_pred CCCCcEEEEEeecCC--CcCCCcccccCCCCHHHHHHHHHHHHHHHHHHhCC
Q 007484 281 YGDIPGLDIIFLIGG--YYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNS 330 (602)
Q Consensus 281 ~~GIPgld~a~~~~~--~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~a 330 (602)
--++|...+.-...+ +-|||..|+++.|+|+.++..-+.+.++++.+.+.
T Consensus 257 G~dLPv~~~~Rs~yg~ypEYHTS~Dnl~fi~p~~L~~s~~~~~~~i~~lE~n 308 (386)
T PF09940_consen 257 GFDLPVGSLMRSKYGEYPEYHTSLDNLDFISPEGLEGSFEVLLEAIEILENN 308 (386)
T ss_dssp TT---EEEEESS-TT--TTTTBTTSSGGG--HHHHHHHHHHHHHHHHHHHH-
T ss_pred CcCCceeeeecccccCCcccccCCCccccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 112444433322222 38999999999999999999999999999988654
No 30
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=99.28 E-value=6.2e-11 Score=119.66 Aligned_cols=165 Identities=19% Similarity=0.253 Sum_probs=112.3
Q ss_pred CEEEEeeecCCCC----CCCCCCCChhHHHHHHHHHHHHHhc---CCCCCCCEEEEEeCcccCCccchHHHHhhc---Cc
Q 007484 145 PSVLMNGHFDGPL----SSPGAGDCGSCVASMLELARLTIDS---GWIPPRPIIFLFNGAEELFMLGAHGFMKAH---KW 214 (602)
Q Consensus 145 ~~vll~aH~Dsv~----~~pGA~D~~sGva~~LE~ar~L~~~---~~~p~~~I~flf~~aEE~gl~GS~~f~~~h---~~ 214 (602)
|.|++.|.+||.. .+|||.++.+|++++|++++.|.+. ..+.+++|.|+|+.||..|.+||++|+.+. .+
T Consensus 1 ~iIlv~armDs~s~F~~~s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiGS~R~vyDm~~~~f 80 (234)
T PF05450_consen 1 PIILVVARMDSFSFFHDLSPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIGSSRFVYDMQNGNF 80 (234)
T ss_pred CEEEEEecccchhcccCCCCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccchHHHHHHHHcCcC
Confidence 5799999999864 3799999999999999999999764 235789999999999999999999998643 12
Q ss_pred c-----------CceeEEEEeccCCCCCCceEEec--CCC--CC---hhhhhhhhhccc-c-cccccc--cccCCCCCCC
Q 007484 215 R-----------DSVGAVINVEASGTGGLDLVCQS--GPS--SW---PSSVYAQSAIYP-M-AHSAAQ--DVFPVIPGDT 272 (602)
Q Consensus 215 ~-----------~~i~a~INLD~~G~gg~~~lfq~--gp~--~~---~~~~y~~~~~~p-~-~~~~~~--e~f~~ips~t 272 (602)
. ++|+.+|.++.+|..+..-++.. ++. +. ..+...+..+.+ . .....+ +.-..+|..|
T Consensus 81 ~~~~~~~~~i~~~~I~~~IElgqvg~~~~~~l~~Hvd~~~~~~~~~~~~~~l~~~~~s~~~~~~~~~~~~~~~~~LPPsS 160 (234)
T PF05450_consen 81 PSDSLQFQPISLDNIDSVIELGQVGLSNSSGLYAHVDSPSNSSVANQVDEALDAAAKSLASSNIVIKKASSSNPPLPPSS 160 (234)
T ss_pred cccccccccccHHHCCEEEEeeccCCCCCCCEEEEecCCccchhhHHHHHHHHHHHHhccccccceeccccCCCCCCcch
Confidence 2 69999999999998665223333 221 11 111111111111 0 111111 1112345444
Q ss_pred chHHHhhcCCCCcEEEEEeecCC---CcCCCcccccCCCCH
Q 007484 273 DYRIFSQDYGDIPGLDIIFLIGG---YYYHTSHDTVDRLLP 310 (602)
Q Consensus 273 D~~~F~~~~~GIPgld~a~~~~~---~~YHT~~Dt~d~id~ 310 (602)
...|.+.-.++||+-++-.+.. .+||+.+|+.++++.
T Consensus 161 -~~sFLr~~~~i~~vVLtd~~~~f~N~~y~S~~D~~~ni~~ 200 (234)
T PF05450_consen 161 -LQSFLRKDPNIPGVVLTDHDSQFTNKYYNSILDDAENINF 200 (234)
T ss_pred -HHHHHccCCCCCEEEecCCCcccccCCccCcccChhhhcC
Confidence 6667764458999988755542 379999999998865
No 31
>PRK08201 hypothetical protein; Provisional
Probab=99.27 E-value=6.6e-11 Score=130.77 Aligned_cols=147 Identities=20% Similarity=0.233 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCC---hhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccce
Q 007484 54 ARAIQHVRVLADEIGDRQEGR---PGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTN 130 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS---~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~N 130 (602)
+++.+.|++|. +|.+-..++ .++.++++||.++|+++|.+ .+++++. . +..|
T Consensus 14 ~~~~~~l~~LV-~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~-----~~~~~~~--~-----------------~~~~ 68 (456)
T PRK08201 14 EAHLEELKEFL-RIPSISALSEHKEDVRKAAEWLAGALEKAGLE-----HVEIMET--A-----------------GHPI 68 (456)
T ss_pred HHHHHHHHHHh-cCCCCCCCCcchHHHHHHHHHHHHHHHHcCCC-----eEEEEec--C-----------------CCCE
Confidence 55667777777 455432211 23347899999999999831 1344321 1 1248
Q ss_pred EEEEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCC
Q 007484 131 IVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRP 189 (602)
Q Consensus 131 Vi~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~ 189 (602)
+++++.|.. +.+.|++++|+|+||. ++|+.|+++|+++++++++.+.+.+.+++++
T Consensus 69 l~a~~~~~~---~~~~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~ 145 (456)
T PRK08201 69 VYADWLHAP---GKPTVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVN 145 (456)
T ss_pred EEEEecCCC---CCCEEEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCC
Confidence 999887632 3467999999999873 4699999999999999999998765567789
Q ss_pred EEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccCC
Q 007484 190 IIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 190 I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
|.|++..+||.|..|+..++++++..-+..++|..|..+
T Consensus 146 i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~ii~e~~~ 184 (456)
T PRK08201 146 VKFCIEGEEEIGSPNLDSFVEEEKDKLAADVVLISDTTL 184 (456)
T ss_pred EEEEEEcccccCCccHHHHHHhhHHhccCCEEEEeCCCc
Confidence 999999999999999999998653222346788888654
No 32
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=99.27 E-value=9.2e-11 Score=127.29 Aligned_cols=148 Identities=22% Similarity=0.261 Sum_probs=110.2
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccc
Q 007484 50 RFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHT 129 (602)
Q Consensus 50 ~Fs~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~ 129 (602)
..-.+++.+.|++|. +|.+.. ++.+++++++|+.++++++| ++++..+.. . ...
T Consensus 5 ~~~~~~~~~~l~~lv-~ipS~~-~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~-~-----------------g~~ 58 (400)
T TIGR01880 5 KWEEDIAVTRFREYL-RINTVQ-PNPDYAACVDFLIKQADELG------LARKTIEFV-P-----------------GKP 58 (400)
T ss_pred ccchHHHHHHHHHHh-ccCccC-CCccHHHHHHHHHHHHHhCC------CceeEEEec-C-----------------Cce
Confidence 355678899999998 566543 23334589999999999999 333322110 1 135
Q ss_pred eEEEEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 007484 130 NIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPR 188 (602)
Q Consensus 130 NVi~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~ 188 (602)
|++++++|+++ ..+.|++++|+|+||. ++|+.|+++|++++|++++.+.+.+.++++
T Consensus 59 ~l~~~~~g~~~--~~~~i~l~~H~DvVp~~~~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~ 136 (400)
T TIGR01880 59 VVVLTWPGSNP--ELPSILLNSHTDVVPVFREHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKR 136 (400)
T ss_pred eEEEEEecCCC--CCCeEEEEcccccCCCCcccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCc
Confidence 99999987542 2367999999999973 358999999999999999999988778889
Q ss_pred CEEEEEeCcccCCc-cchHHHHhhcCccCceeEEEEecc
Q 007484 189 PIIFLFNGAEELFM-LGAHGFMKAHKWRDSVGAVINVEA 226 (602)
Q Consensus 189 ~I~flf~~aEE~gl-~GS~~f~~~h~~~~~i~a~INLD~ 226 (602)
+|.|+|..+||.|. .|++.++++... +.++..+.+|.
T Consensus 137 ~v~l~~~~dEE~g~~~G~~~~~~~~~~-~~~~~~~~~d~ 174 (400)
T TIGR01880 137 TIHISFVPDEEIGGHDGMEKFAKTDEF-KALNLGFALDE 174 (400)
T ss_pred eEEEEEeCCcccCcHhHHHHHHHhhhc-cCCceEEEEcC
Confidence 99999999999875 599988875322 33455555553
No 33
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=99.27 E-value=1.4e-10 Score=125.43 Aligned_cols=151 Identities=21% Similarity=0.218 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHhcCCCCCC--ChhHHHHHHHHHHHHhcccccCCCcee-EEEEeeeecCccccccccccccccccccce
Q 007484 54 ARAIQHVRVLADEIGDRQEG--RPGLREAAVYIKTQLEGIKERAGPKFR-IEIEENVVNGSFNMIFLGHSISLGYRNHTN 130 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~g--S~~~e~a~~yL~~~l~~ig~~~~~~~~-vevd~~~~~G~~~~~~~~~~~~~~y~~~~N 130 (602)
+++.+.+++|. +|.+-... ..++.++++||.++|+++| ++ ++..... ..+ .......|
T Consensus 5 ~~~~~~l~~lv-~i~s~s~~~~~~~e~~~~~~l~~~l~~~G------~~~~~~~~~~--~~~----------~~~~~~~n 65 (400)
T PRK13983 5 DEMIELLSELI-AIPAVNPDFGGEGEKEKAEYLESLLKEYG------FDEVERYDAP--DPR----------VIEGVRPN 65 (400)
T ss_pred HHHHHHHHHHh-CcCCCCCCCCCccHHHHHHHHHHHHHHcC------CceEEEEecC--Ccc----------cccCCCcc
Confidence 46788888888 45543211 1235589999999999999 33 3322110 000 00011369
Q ss_pred EEEEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCC
Q 007484 131 IVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRP 189 (602)
Q Consensus 131 Vi~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~ 189 (602)
++++++|.+ +.+.|++++|+|+||. ++|+.|++.|+++++++++.+.+.+.+++++
T Consensus 66 l~~~~~g~~---~~~~lll~~H~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~ 142 (400)
T PRK13983 66 IVAKIPGGD---GKRTLWIISHMDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYN 142 (400)
T ss_pred EEEEecCCC---CCCeEEEEeeccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCc
Confidence 999998753 2357999999999985 3689999999999999999999887788899
Q ss_pred EEEEEeCcccCCcc-chHHHHhhcCc-cCceeEEEEecc
Q 007484 190 IIFLFNGAEELFML-GAHGFMKAHKW-RDSVGAVINVEA 226 (602)
Q Consensus 190 I~flf~~aEE~gl~-GS~~f~~~h~~-~~~i~a~INLD~ 226 (602)
|.|+|..+||.|.. |++.+.++++. ..+..+++..|.
T Consensus 143 v~~~~~~dEE~g~~~g~~~~~~~~~~~~~~~d~~i~~~~ 181 (400)
T PRK13983 143 LGLAFVSDEETGSKYGIQYLLKKHPELFKKDDLILVPDA 181 (400)
T ss_pred EEEEEEeccccCCcccHHHHHhhcccccCCCCEEEEecC
Confidence 99999999998885 88888876432 233456666553
No 34
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=99.25 E-value=8e-11 Score=131.00 Aligned_cols=136 Identities=23% Similarity=0.329 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEE
Q 007484 53 EARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi 132 (602)
.+|+.+.+++|. ++. |+ |.+++++++|+.+++++.| ++++.+. ..|++
T Consensus 3 ~~~~~~~l~~l~-~i~-s~--s~~e~~~~~~l~~~l~~~G------~~~~~~~----------------------~~n~~ 50 (477)
T TIGR01893 3 PSRVFKYFEEIS-KIP-RP--SKNEKEVSNFIVNWAKKLG------LEVKQDE----------------------VGNVL 50 (477)
T ss_pred HHHHHHHHHHHH-cCC-CC--CccHHHHHHHHHHHHHHcC------CeEEEeC----------------------CCeEE
Confidence 478999999999 563 43 5666689999999999998 5555432 14999
Q ss_pred EEEeCCCCCCCCCEEEEeeecCCCCC------------------------CCCCC---CChhHHHHHHHHHHHHHhcCCC
Q 007484 133 MRISSTDSQDTDPSVLMNGHFDGPLS------------------------SPGAG---DCGSCVASMLELARLTIDSGWI 185 (602)
Q Consensus 133 ~~i~g~~~~~~~~~vll~aH~Dsv~~------------------------~pGA~---D~~sGva~~LE~ar~L~~~~~~ 185 (602)
++++|+.+.++.+.|++++|+|+|+. ++|+. |++.|++++|++++. . ..
T Consensus 51 ~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~~~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~-~~ 126 (477)
T TIGR01893 51 IRKPATPGYENHPPIVLQGHMDMVCEKNEDSLHDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---N-NL 126 (477)
T ss_pred EEEcCCCCCCCCCeEEEEeeccccCCCCCCCCCCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---C-CC
Confidence 99987532223467999999999984 24553 999999999998875 2 23
Q ss_pred CCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccC
Q 007484 186 PPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEAS 227 (602)
Q Consensus 186 p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~ 227 (602)
++++|.++|+.+||.|+.||+.+..+. .+.+..+|.|..
T Consensus 127 ~~~~i~~~~~~dEE~g~~Gs~~l~~~~---~~~~~~~~~d~~ 165 (477)
T TIGR01893 127 KHPPLELLFTVDEETGMDGALGLDENW---LSGKILINIDSE 165 (477)
T ss_pred CCCCEEEEEEeccccCchhhhhcChhh---cCCcEEEEecCC
Confidence 566999999999999999999997532 234678888853
No 35
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=99.24 E-value=1.1e-10 Score=124.48 Aligned_cols=134 Identities=22% Similarity=0.145 Sum_probs=104.2
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceE
Q 007484 52 SEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNI 131 (602)
Q Consensus 52 s~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NV 131 (602)
.++++.+.+++|. +|.+ .|..++++++|+.++++++| ++++.+. ..|+
T Consensus 4 ~~~~~~~~l~~Lv-~i~s---~s~~e~~~~~~l~~~l~~~G------~~~~~~~----------------------~~n~ 51 (348)
T PRK04443 4 SALEARELLKGLV-EIPS---PSGEEAAAAEFLVEFMESHG------REAWVDE----------------------AGNA 51 (348)
T ss_pred chHHHHHHHHHHH-cCCC---CCCChHHHHHHHHHHHHHcC------CEEEEcC----------------------CCcE
Confidence 3567888999998 5554 23445689999999999998 4554321 2489
Q ss_pred EEEEeCCCCCCCCCEEEEeeecCCCCC------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCccc
Q 007484 132 VMRISSTDSQDTDPSVLMNGHFDGPLS------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEE 199 (602)
Q Consensus 132 i~~i~g~~~~~~~~~vll~aH~Dsv~~------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE 199 (602)
++++++. ++.|++++|+|+||. ++|+.|+++|+++++++++.+ +.+++++|.|++..+||
T Consensus 52 i~~~~~~-----~~~l~~~~H~DtVp~~~p~~~~~g~iyGrG~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE 123 (348)
T PRK04443 52 RGPAGDG-----PPLVLLLGHIDTVPGDIPVRVEDGVLWGRGSVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEE 123 (348)
T ss_pred EEEcCCC-----CCEEEEEeeccccCCCCCcEeeCCeEEeecccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccc
Confidence 9988431 367999999999974 579999999999999999999 34678899999999999
Q ss_pred CCccchHHHHhhcCccCceeEEEEeccCC
Q 007484 200 LFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 200 ~gl~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
.|..|...++.+. . +..++|+.|..+
T Consensus 124 ~g~~~~~~~l~~~-~--~~d~~iv~Ept~ 149 (348)
T PRK04443 124 APSSGGARLVADR-E--RPDAVIIGEPSG 149 (348)
T ss_pred cCChhHHHHHHhc-c--CCCEEEEeCCCC
Confidence 9988887777643 2 467788888544
No 36
>PRK07079 hypothetical protein; Provisional
Probab=99.24 E-value=1.3e-10 Score=129.01 Aligned_cols=149 Identities=16% Similarity=0.155 Sum_probs=106.6
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCh-hHHHHHHHH----HHHHhcccccCCCceeEEEEeeeecCcccccccccccccccc
Q 007484 52 SEARAIQHVRVLADEIGDRQEGRP-GLREAAVYI----KTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYR 126 (602)
Q Consensus 52 s~era~~~L~~La~~ig~R~~gS~-~~e~a~~yL----~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~ 126 (602)
+++++.+.|++|. +|.+- .+.+ ++...++|+ .++|+++| +++++.+... ..
T Consensus 15 ~~~~~~~~L~~LV-~ipSv-s~~~~~~~~~~~~l~~~~~~~l~~~G------~~~~~~~~~~----------------~~ 70 (469)
T PRK07079 15 DSGAFFADLARRV-AYRTE-SQNPDRAPALRAYLTDEIAPALAALG------FTCRIVDNPV----------------AG 70 (469)
T ss_pred ccHHHHHHHHHHh-ccCCC-CCCcccHHHHHHHHHHHHHHHHHHCC------CeEEEEecCC----------------CC
Confidence 3456888899988 55552 2222 233566666 45788877 4555432110 01
Q ss_pred ccceEEEEEeCCCCCCCCCEEEEeeecCCCCC----------------------CCCCCCChhHHHHHHHHHHHHHhc-C
Q 007484 127 NHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS----------------------SPGAGDCGSCVASMLELARLTIDS-G 183 (602)
Q Consensus 127 ~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~----------------------~pGA~D~~sGva~~LE~ar~L~~~-~ 183 (602)
+..||++++.|.+ +.+.|++++|+|+||. ++|+.|+|+|++++|.+++.+.+. +
T Consensus 71 ~~~~vva~~~~~~---~~~~lll~gH~DvVp~~~~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~ 147 (469)
T PRK07079 71 GGPFLIAERIEDD---ALPTVLIYGHGDVVRGYDEQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARG 147 (469)
T ss_pred CCCEEEEEeCCCC---CCCEEEEEcccCCCCCChHHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcC
Confidence 2359999986532 2467999999999973 359999999999999999998754 4
Q ss_pred CCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccC
Q 007484 184 WIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEAS 227 (602)
Q Consensus 184 ~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~ 227 (602)
.+++++|.|++.++||.|..|++.++++++...+..++|..|..
T Consensus 148 ~~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~d~~iv~e~~ 191 (469)
T PRK07079 148 GRLGFNVKLLIEMGEEIGSPGLAEVCRQHREALAADVLIASDGP 191 (469)
T ss_pred CCCCCCEEEEEECccccCCccHHHHHHHhHHhcCCCEEEEeCCC
Confidence 67889999999999999999999999987432345677887753
No 37
>PRK06915 acetylornithine deacetylase; Validated
Probab=99.23 E-value=2.4e-10 Score=124.94 Aligned_cols=156 Identities=17% Similarity=0.172 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEE
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~ 133 (602)
+++.+.+++|. ++.+ .|.+++++.+||.++|+++| +++++...........+..... ...+....|+++
T Consensus 17 ~~~~~~l~~lv-~ips---~s~~e~~~~~~l~~~l~~~G------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~nlia 85 (422)
T PRK06915 17 EEAVKLLKRLI-QEKS---VSGDESGAQAIVIEKLRELG------LDLDIWEPSFKKLKDHPYFVSP-RTSFSDSPNIVA 85 (422)
T ss_pred HHHHHHHHHHH-hCCC---CCcchHHHHHHHHHHHHhcC------CeeEEeecchhhhhcccccCCc-ccccCCCceEEE
Confidence 56777888887 4333 34555689999999999999 4444322110000000000000 001124579999
Q ss_pred EEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 007484 134 RISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (602)
Q Consensus 134 ~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~f 192 (602)
+++|++ +.+.|++.+|+|+||. ++|+.|+++|++++|.+++.|++.+.+++.+|.|
T Consensus 86 ~~~g~~---~~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v~~ 162 (422)
T PRK06915 86 TLKGSG---GGKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDVIF 162 (422)
T ss_pred EEcCCC---CCCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 998753 2367999999999984 4699999999999999999999887778899999
Q ss_pred EEeCcccCCccchHHHHhhcCccCceeEEEEecc
Q 007484 193 LFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEA 226 (602)
Q Consensus 193 lf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~ 226 (602)
++..+||.|..|+...+.+. + +..+++.-|.
T Consensus 163 ~~~~dEE~g~~G~~~~~~~~-~--~~d~~i~~ep 193 (422)
T PRK06915 163 QSVIEEESGGAGTLAAILRG-Y--KADGAIIPEP 193 (422)
T ss_pred EEecccccCCcchHHHHhcC-c--CCCEEEECCC
Confidence 99999999888988877642 2 4466666664
No 38
>PRK05469 peptidase T; Provisional
Probab=99.22 E-value=1.9e-10 Score=125.29 Aligned_cols=138 Identities=15% Similarity=0.237 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHhcCCCCC------CC-hhHHHHHHHHHHHHhcccccCCCcee-EEEEeeeecCcccccccccccccccc
Q 007484 55 RAIQHVRVLADEIGDRQE------GR-PGLREAAVYIKTQLEGIKERAGPKFR-IEIEENVVNGSFNMIFLGHSISLGYR 126 (602)
Q Consensus 55 ra~~~L~~La~~ig~R~~------gS-~~~e~a~~yL~~~l~~ig~~~~~~~~-vevd~~~~~G~~~~~~~~~~~~~~y~ 126 (602)
.+.+.|++|. +|.+... .| ++++++++||+++|+++| ++ ++++.
T Consensus 3 ~~~~~l~~~~-~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G------~~~~~~~~--------------------- 54 (408)
T PRK05469 3 KLLERFLRYV-KIDTQSDENSTTVPSTEGQWDLAKLLVEELKELG------LQDVTLDE--------------------- 54 (408)
T ss_pred hHHHHHHhhE-EeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcC------CCeEEECC---------------------
Confidence 4667788887 4544321 11 345689999999999999 43 33321
Q ss_pred ccceEEEEEeCCCCCCCCCEEEEeeecCCCCCC----------------------------------------------C
Q 007484 127 NHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS----------------------------------------------P 160 (602)
Q Consensus 127 ~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~----------------------------------------------p 160 (602)
..||+++++|+. .++.+.|++.+|+|+||.. .
T Consensus 55 -~~~v~~~~~g~~-~~~~~~i~l~~H~D~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~r 132 (408)
T PRK05469 55 -NGYVMATLPANV-DKDVPTIGFIAHMDTAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTD 132 (408)
T ss_pred -CeEEEEEecCCC-CCCCCeEEEEEeccCCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcC
Confidence 238999998753 1235789999999999642 2
Q ss_pred CC----CCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEecc
Q 007484 161 GA----GDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEA 226 (602)
Q Consensus 161 GA----~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~ 226 (602)
|+ .|+++|+++++.+++.|++.+..++.+|+|+|..+||.| .|++.++.+. . +....+.+|.
T Consensus 133 G~~~lg~D~Kgglaa~l~a~~~l~~~~~~~~g~v~~~f~~dEE~g-~Ga~~~~~~~-~--~~~~~~~~~~ 198 (408)
T PRK05469 133 GTTLLGADDKAGIAEIMTALEYLIAHPEIKHGDIRVAFTPDEEIG-RGADKFDVEK-F--GADFAYTVDG 198 (408)
T ss_pred CCEeecccchHHHHHHHHHHHHHHhCCCCCCCCEEEEEecccccC-CCHHHhhhhh-c--CCcEEEEecC
Confidence 55 999999999999999998876667789999999999998 8998886432 1 2234555554
No 39
>PRK06837 acetylornithine deacetylase; Provisional
Probab=99.20 E-value=2.5e-10 Score=125.14 Aligned_cols=154 Identities=16% Similarity=0.190 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEe---eeecCccccccccccccccccccce
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEE---NVVNGSFNMIFLGHSISLGYRNHTN 130 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~---~~~~G~~~~~~~~~~~~~~y~~~~N 130 (602)
+++.+.+++|. +|.+ .|.++.++++||.++|+++| ++++... ....+... ..+....+.+..|
T Consensus 20 ~~~~~~l~~li-~ipS---~s~~e~~~~~~l~~~l~~~G------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~n 85 (427)
T PRK06837 20 DAQVAFTQDLV-RFPS---TRGAEAPCQDFLARAFRERG------YEVDRWSIDPDDLKSHPG----AGPVEIDYSGAPN 85 (427)
T ss_pred HHHHHHHHHHh-ccCC---CCCcHHHHHHHHHHHHHHCC------CceEEecCCHHHhhhccc----ccccccccCCCce
Confidence 44566677776 4443 34555689999999999999 3433211 10000000 0001112345689
Q ss_pred EEEEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCC
Q 007484 131 IVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRP 189 (602)
Q Consensus 131 Vi~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~ 189 (602)
|+++++|+++ +.+.|++.+|+|+||. ++|+.|+++|++++|.+++.+++.+.+++++
T Consensus 86 l~a~~~g~~~--~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~ 163 (427)
T PRK06837 86 VVGTYRPAGK--TGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAAR 163 (427)
T ss_pred EEEEecCCCC--CCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCc
Confidence 9999987532 2467999999999985 3499999999999999999999888788999
Q ss_pred EEEEEeCcccCCccchHHHHhhcCccCceeEEEEecc
Q 007484 190 IIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEA 226 (602)
Q Consensus 190 I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~ 226 (602)
|.|+|+.+||.+..|+...+.+. . +..++|..|.
T Consensus 164 i~~~~~~dEE~~g~g~~~~~~~~-~--~~d~~iv~ep 197 (427)
T PRK06837 164 VHFQSVIEEESTGNGALSTLQRG-Y--RADACLIPEP 197 (427)
T ss_pred EEEEEEeccccCCHhHHHHHhcC-c--CCCEEEEcCC
Confidence 99999999998888887665532 1 3455565554
No 40
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=99.20 E-value=2.5e-10 Score=122.00 Aligned_cols=128 Identities=24% Similarity=0.329 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEE
Q 007484 55 RAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMR 134 (602)
Q Consensus 55 ra~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~ 134 (602)
|.++.+++|. +|.. .|.++.++++||.++|+++| ++++.++.. + .+.+..|++++
T Consensus 1 ~~~~~~~~l~-~i~s---~s~~e~~~~~~l~~~l~~~g------~~~~~~~~~--~-------------~~~~~~~~~~~ 55 (361)
T TIGR01883 1 RLKKYFLELI-QIDS---ESGKEKAILTYLKKQITKLG------IPVSLDEVP--A-------------EVSNDNNLIAR 55 (361)
T ss_pred ChHHHHHHHe-ecCC---CCCcHHHHHHHHHHHHHHcC------CEEEEeccc--c-------------ccCCCceEEEE
Confidence 3567788887 4443 34455689999999999998 444433210 0 00124699999
Q ss_pred EeCCCCCCCCCEEEEeeecCCCCC--------------CCCC----CCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeC
Q 007484 135 ISSTDSQDTDPSVLMNGHFDGPLS--------------SPGA----GDCGSCVASMLELARLTIDSGWIPPRPIIFLFNG 196 (602)
Q Consensus 135 i~g~~~~~~~~~vll~aH~Dsv~~--------------~pGA----~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~ 196 (602)
++|++ +.+.|++++|+|+||. ++|+ .|+++|++++|++++.|.+.+ .++++|.|+|+.
T Consensus 56 ~~g~~---~~~~i~l~~H~D~V~~~~~~~~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~ 131 (361)
T TIGR01883 56 LPGTV---KFDTIFFCGHMDTVPPGAGPEPVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTV 131 (361)
T ss_pred EeCCC---CCCcEEEEeeccccCCCCCCCceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEc
Confidence 98753 2367999999999984 3566 899999999999999998765 567899999999
Q ss_pred cccCCccchHHHHhh
Q 007484 197 AEELFMLGAHGFMKA 211 (602)
Q Consensus 197 aEE~gl~GS~~f~~~ 211 (602)
+||.|..|++.+.++
T Consensus 132 ~EE~g~~G~~~~~~~ 146 (361)
T TIGR01883 132 KEELGLIGMRLFDES 146 (361)
T ss_pred ccccCchhHhHhChh
Confidence 999999999988764
No 41
>PRK07318 dipeptidase PepV; Reviewed
Probab=99.19 E-value=2.7e-10 Score=126.33 Aligned_cols=126 Identities=15% Similarity=0.141 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHhcCCCCCC---------ChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccccccccccccc
Q 007484 54 ARAIQHVRVLADEIGDRQEG---------RPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLG 124 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~g---------S~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~ 124 (602)
+++.+.|++|. +|.+-..+ -++++++.+|+.+++++.| ++++..
T Consensus 14 ~~~~~~l~~lv-~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G------~~~~~~-------------------- 66 (466)
T PRK07318 14 DDLIEDLQELL-RINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDG------FKTKNV-------------------- 66 (466)
T ss_pred HHHHHHHHHHh-ccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCC------CEEEEe--------------------
Confidence 56777888887 56553322 1234589999999999998 443321
Q ss_pred ccccceEEEEEeCCCCCCCCCEEEEeeecCCCCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCC
Q 007484 125 YRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS-------------------SPGAGDCGSCVASMLELARLTIDSGWI 185 (602)
Q Consensus 125 y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~-------------------~pGA~D~~sGva~~LE~ar~L~~~~~~ 185 (602)
.|++++++..+ +++.|++++|+|+||. ++|+.|+++|+++++.+++.+++.+.+
T Consensus 67 ----~n~~~~~~~~~---~~~~l~l~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~ 139 (466)
T PRK07318 67 ----DNYAGHIEYGE---GEEVLGILGHLDVVPAGDGWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLP 139 (466)
T ss_pred ----cCccceEEECC---CCCEEEEEEecCCCCCCCCCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCC
Confidence 15566654321 2356999999999974 479999999999999999999988888
Q ss_pred CCCCEEEEEeCcccCCccchHHHHhhcC
Q 007484 186 PPRPIIFLFNGAEELFMLGAHGFMKAHK 213 (602)
Q Consensus 186 p~~~I~flf~~aEE~gl~GS~~f~~~h~ 213 (602)
++++|.|++..+||.|..|++.++++++
T Consensus 140 ~~~~i~l~~~~DEE~g~~G~~~l~~~~~ 167 (466)
T PRK07318 140 LSKKVRFIVGTDEESGWKCMDYYFEHEE 167 (466)
T ss_pred CCccEEEEEEcccccCchhHHHHHHhCC
Confidence 8889999999999999999999998764
No 42
>PRK13381 peptidase T; Provisional
Probab=99.18 E-value=3.6e-10 Score=123.01 Aligned_cols=137 Identities=17% Similarity=0.268 Sum_probs=99.7
Q ss_pred HHHHHHHHHHhcCCCC-------CCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccccccccccccccccc
Q 007484 56 AIQHVRVLADEIGDRQ-------EGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNH 128 (602)
Q Consensus 56 a~~~L~~La~~ig~R~-------~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~ 128 (602)
+.+.+.+|. +|.+.. ..+++++++++||.++|+++|.+ .++++ + .
T Consensus 3 ~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~-----~~~~~-----~-----------------~ 54 (404)
T PRK13381 3 LTDRFFRYL-KVNSQSDAASGTLPSTPGQHELAKLLADELRELGLE-----DIVID-----E-----------------H 54 (404)
T ss_pred HHHHhHhhE-EEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCC-----cEEEc-----C-----------------C
Confidence 345555665 344332 23456668999999999999932 12221 1 2
Q ss_pred ceEEEEEeCCCCCCCCCEEEEeeecCCCCCC----------------------------------------------CCC
Q 007484 129 TNIVMRISSTDSQDTDPSVLMNGHFDGPLSS----------------------------------------------PGA 162 (602)
Q Consensus 129 ~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~----------------------------------------------pGA 162 (602)
.||+++++|+++ +.+.|++++|+|+||.+ +|+
T Consensus 55 ~nvi~~~~g~~~--~~~~lll~~H~D~Vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~ 132 (404)
T PRK13381 55 AIVTAKLPGNTP--GAPRIGFIAHLDTVDVGLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGT 132 (404)
T ss_pred eEEEEEEecCCC--CCCeEEEEEEecCCCccCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCc
Confidence 499999987642 23789999999999743 367
Q ss_pred ----CCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEecc
Q 007484 163 ----GDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEA 226 (602)
Q Consensus 163 ----~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~ 226 (602)
.|+++|+|++|.+++.|.+.+ .++.+|.|+|..+||.|..|++.++.+. + +....+.+|.
T Consensus 133 ~~~g~DmKgg~aa~l~a~~~l~~~~-~~~g~i~~~~~~dEE~g~~G~~~~~~~~-~--~~d~~~~~~~ 196 (404)
T PRK13381 133 SVLGADNKAAIAVVMTLLENLTENE-VEHGDIVVAFVPDEEIGLRGAKALDLAR-F--PVDFAYTIDC 196 (404)
T ss_pred cccccccHHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccccccHHHHHHhc-C--CCCEEEEecC
Confidence 999999999999999998764 4577999999999999999999997642 2 2445555664
No 43
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=99.17 E-value=4.8e-10 Score=122.43 Aligned_cols=128 Identities=19% Similarity=0.254 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHhcCCCCC-------CChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccccccccccccccc
Q 007484 54 ARAIQHVRVLADEIGDRQE-------GRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYR 126 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~-------gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~ 126 (602)
+|+.+.+-+++ +|.+..- .+.++++.++||+++|+++|.+ ++++|..
T Consensus 3 ~~~~~~f~~~~-~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~-----~v~~d~~-------------------- 56 (410)
T TIGR01882 3 EELLPRFLTYV-KVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQ-----DAHYDEK-------------------- 56 (410)
T ss_pred hHHHHHHHhhE-EEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCc-----eEEEcCC--------------------
Confidence 56777777777 4554321 1235557999999999999931 2666521
Q ss_pred ccceEEEEEeCCCCCCCCCEEEEeeecCCCCC----------------------------------------------CC
Q 007484 127 NHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS----------------------------------------------SP 160 (602)
Q Consensus 127 ~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~----------------------------------------------~p 160 (602)
..||+++++|+.+ ...+.|++.||+|||+. +.
T Consensus 57 -~gnv~~~~~~~~~-~~~~~i~~~aHmDTv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~ 134 (410)
T TIGR01882 57 -NGYVIATIPSNTD-KDVPTIGFLAHVDTADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTD 134 (410)
T ss_pred -ceEEEEEecCCCC-CCCCEEEEEEecccCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcC
Confidence 2499999988542 11378999999999973 11
Q ss_pred C----CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHh
Q 007484 161 G----AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMK 210 (602)
Q Consensus 161 G----A~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~ 210 (602)
| +.||++|+|+||++++.|++.+..++.+|.|+|+.+||.| .|++.+..
T Consensus 135 g~~l~G~D~KgglAa~l~A~~~L~e~~~~~~g~I~~~ft~dEE~g-~Ga~~l~~ 187 (410)
T TIGR01882 135 GTTLLGADDKAGIAEIMTAADYLINHPEIKHGTIRVAFTPDEEIG-RGAHKFDV 187 (410)
T ss_pred CCEeecccCHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECcccCC-cCcchhhh
Confidence 2 3799999999999999998864345779999999999998 59888764
No 44
>PRK07522 acetylornithine deacetylase; Provisional
Probab=99.17 E-value=4.1e-10 Score=121.28 Aligned_cols=140 Identities=15% Similarity=0.156 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHhcCCCCCCChhH-HHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEE
Q 007484 55 RAIQHVRVLADEIGDRQEGRPGL-REAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (602)
Q Consensus 55 ra~~~L~~La~~ig~R~~gS~~~-e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~ 133 (602)
.+.+.+++|. +|.+. |.++ .++.+||.++|+++| +++++.+... ....|+++
T Consensus 5 ~~~~~l~~lv-~i~S~---s~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~-----------------~~~~nv~a 57 (385)
T PRK07522 5 SSLDILERLV-AFDTV---SRDSNLALIEWVRDYLAAHG------VESELIPDPE-----------------GDKANLFA 57 (385)
T ss_pred hHHHHHHHHh-CCCCc---CCCccHHHHHHHHHHHHHcC------CeEEEEecCC-----------------CCcccEEE
Confidence 4778888888 55543 3333 388999999999999 4554432211 12359999
Q ss_pred EEeCCCCCCCCCEEEEeeecCCCCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEE
Q 007484 134 RISSTDSQDTDPSVLMNGHFDGPLS--------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFL 193 (602)
Q Consensus 134 ~i~g~~~~~~~~~vll~aH~Dsv~~--------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~fl 193 (602)
+++++ +.+.|++.+|+|+|+. ++|+.|+++++++++++++.|.+. +++++|.|+
T Consensus 58 ~~~~~----~~~~ill~~H~Dtv~~~~~~W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~ 131 (385)
T PRK07522 58 TIGPA----DRGGIVLSGHTDVVPVDGQAWTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAA--PLRRPLHLA 131 (385)
T ss_pred EeCCC----CCCeEEEEeecccccCCCCCCCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhC--CCCCCEEEE
Confidence 98653 2357999999999873 469999999999999999999876 467899999
Q ss_pred EeCcccCCccchHHHHhhcCc-cCceeEEEEeccC
Q 007484 194 FNGAEELFMLGAHGFMKAHKW-RDSVGAVINVEAS 227 (602)
Q Consensus 194 f~~aEE~gl~GS~~f~~~h~~-~~~i~a~INLD~~ 227 (602)
|..+||.|..|++.++++.+. ..+...+|..|..
T Consensus 132 ~~~dEE~g~~G~~~l~~~~~~~~~~~d~~i~~ep~ 166 (385)
T PRK07522 132 FSYDEEVGCLGVPSMIARLPERGVKPAGCIVGEPT 166 (385)
T ss_pred EEeccccCCccHHHHHHHhhhcCCCCCEEEEccCC
Confidence 999999998999999875422 2234666666643
No 45
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=99.17 E-value=6.7e-10 Score=123.77 Aligned_cols=138 Identities=22% Similarity=0.254 Sum_probs=105.0
Q ss_pred ccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccce
Q 007484 51 FSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTN 130 (602)
Q Consensus 51 Fs~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~N 130 (602)
...++..+.+++|+ +|. + +|..+++.++|+.++++++| +++++|+ ..|
T Consensus 7 ~~~~~~~~~l~~Lv-~ip-s--~S~~e~~~~~~l~~~~~~~G------~~~~~d~----------------------~gn 54 (485)
T PRK15026 7 LSPQPLWDIFAKIC-SIP-H--PSYHEEQLAEYIVGWAKEKG------FHVERDQ----------------------VGN 54 (485)
T ss_pred cCHHHHHHHHHHHh-CCC-C--CCCCHHHHHHHHHHHHHhCC------CEEEEEe----------------------cCe
Confidence 34677889999999 444 3 45555699999999999999 5555542 139
Q ss_pred EEEEEeCCCCCCCCCEEEEeeecCCCCC------------------------CCCC---CCChhHHHHHHHHHHHHHhcC
Q 007484 131 IVMRISSTDSQDTDPSVLMNGHFDGPLS------------------------SPGA---GDCGSCVASMLELARLTIDSG 183 (602)
Q Consensus 131 Vi~~i~g~~~~~~~~~vll~aH~Dsv~~------------------------~pGA---~D~~sGva~~LE~ar~L~~~~ 183 (602)
++++.+++.+.+..+.|++.+|+|+|+. ++|+ .|+++|++++|+++ .+.+
T Consensus 55 vi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~~~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~ 131 (485)
T PRK15026 55 ILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---ADEN 131 (485)
T ss_pred EEEEEcCCCCCCCCCEEEEEeeecccCCCCCCccccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---HhCC
Confidence 9999876422234567999999999974 2577 49999999998876 3333
Q ss_pred CCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccC
Q 007484 184 WIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEAS 227 (602)
Q Consensus 184 ~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~ 227 (602)
. ++.+|.++|+.+||.|+.|++.+.. . ..+.+++||+|..
T Consensus 132 ~-~~~~i~~l~t~dEE~G~~ga~~l~~--~-~~~~~~~i~~e~~ 171 (485)
T PRK15026 132 V-VHGPLEVLLTMTEEAGMDGAFGLQS--N-WLQADILINTDSE 171 (485)
T ss_pred C-CCCCEEEEEEcccccCcHhHHHhhh--c-cCCcCEEEEeCCC
Confidence 3 3678999999999999999999854 2 2467999999985
No 46
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=99.17 E-value=3.9e-10 Score=120.36 Aligned_cols=137 Identities=19% Similarity=0.194 Sum_probs=100.0
Q ss_pred HHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEEeCC
Q 007484 59 HVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISST 138 (602)
Q Consensus 59 ~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g~ 138 (602)
.+++|. +|.+-. +. ++.++++||.++|+++| +++++++... | ....|+++++.|+
T Consensus 2 ~l~~lv-~i~S~s-~~-~~~~~~~~l~~~l~~~G------~~~~~~~~~~-~---------------~~~~nl~~~~~~~ 56 (364)
T TIGR01892 2 ILTKLV-AFDSTS-FR-PNVDLIDWAQAYLEALG------FSVEVQPFPD-G---------------AEKSNLVAVIGPS 56 (364)
T ss_pred hHHHhh-CcCCcC-Cc-cHHHHHHHHHHHHHHcC------CeEEEEeCCC-C---------------CccccEEEEecCC
Confidence 456676 444421 21 22588999999999999 5555543211 1 1246999999653
Q ss_pred CCCCCCCEEEEeeecCCCCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcc
Q 007484 139 DSQDTDPSVLMNGHFDGPLS--------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAE 198 (602)
Q Consensus 139 ~~~~~~~~vll~aH~Dsv~~--------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aE 198 (602)
+.+.|++.+|+|+||. ++|+.|+++|++++|.+++.|++. +.+++|.|+|..+|
T Consensus 57 ----~~~~i~l~~H~Dtvp~~~~~w~~~Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~~E 130 (364)
T TIGR01892 57 ----GAGGLALSGHTDVVPYDDAAWTRDPFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAE--QLKKPLHLALTADE 130 (364)
T ss_pred ----CCCeEEEEcccccccCCCCcCCCCCCcceeeCCEEEecCccccchHHHHHHHHHHHHHhc--CcCCCEEEEEEecc
Confidence 2356999999999974 469999999999999999999875 35779999999999
Q ss_pred cCCccchHHHHhhcCccCceeEEEEeccCC
Q 007484 199 ELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 199 E~gl~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
|.|..|++.++++.. .+...++.-|..+
T Consensus 131 E~g~~G~~~~~~~~~--~~~d~~i~~ep~~ 158 (364)
T TIGR01892 131 EVGCTGAPKMIEAGA--GRPRHAIIGEPTR 158 (364)
T ss_pred ccCCcCHHHHHHhcC--CCCCEEEECCCCC
Confidence 999999999998654 2334566656433
No 47
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=99.16 E-value=4e-10 Score=120.08 Aligned_cols=129 Identities=19% Similarity=0.187 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEE
Q 007484 53 EARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi 132 (602)
.+++.+.+++|. +|.+ .|.+++++++||.++++++| +++++++ ..|.+
T Consensus 9 ~~~~~~~l~~lv-~i~s---~s~~e~~~~~~l~~~l~~~g------~~~~~~~----------------------~~~~~ 56 (346)
T PRK00466 9 KQKAKELLLDLL-SIYT---PSGNETNATKFFEKISNELN------LKLEILP----------------------DSNSF 56 (346)
T ss_pred HHHHHHHHHHHh-cCCC---CCCCHHHHHHHHHHHHHHcC------CeEEEec----------------------CCCcE
Confidence 468888999998 5654 34455689999999999998 4455432 12443
Q ss_pred EEEeCCCCCCCCCEEEEeeecCCCCC------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccC
Q 007484 133 MRISSTDSQDTDPSVLMNGHFDGPLS------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEEL 200 (602)
Q Consensus 133 ~~i~g~~~~~~~~~vll~aH~Dsv~~------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~ 200 (602)
. .|. +.|++++|+|+||. ++|+.|+++|+++++++++.+.+.+ .++.|+++.+||.
T Consensus 57 ~--~g~------~~lll~gH~DtVp~~~~~~~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~ 124 (346)
T PRK00466 57 I--LGE------GDILLASHVDTVPGYIEPKIEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEES 124 (346)
T ss_pred e--cCC------CeEEEEeccccCCCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCccc
Confidence 2 331 34999999999985 4899999999999999999998764 3589999999999
Q ss_pred CccchHHHHhhcCccCceeEEEEeccCC
Q 007484 201 FMLGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 201 gl~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
|..|++.+++++ .+.+++|..|..+
T Consensus 125 g~~G~~~l~~~~---~~~d~~i~~ep~~ 149 (346)
T PRK00466 125 TSIGAKELVSKG---FNFKHIIVGEPSN 149 (346)
T ss_pred CCccHHHHHhcC---CCCCEEEEcCCCC
Confidence 999999998864 2456777777654
No 48
>PRK08652 acetylornithine deacetylase; Provisional
Probab=99.16 E-value=4.2e-10 Score=119.31 Aligned_cols=131 Identities=23% Similarity=0.242 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEE
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~ 133 (602)
|++.+.+++|. ++.. .|.++.++++||.++|+++| ++++.+.. + +..|+++
T Consensus 2 ~~~~~~~~~lv-~ips---~s~~e~~~~~~l~~~l~~~G------~~v~~~~~---~----------------~~~~~~~ 52 (347)
T PRK08652 2 ERAKELLKQLV-KIPS---PSGQEDEIALHIMEFLESLG------YDVHIESD---G----------------EVINIVV 52 (347)
T ss_pred hhHHHHHHHHh-cCCC---CCCchHHHHHHHHHHHHHcC------CEEEEEec---C----------------ceeEEEc
Confidence 57888889888 4444 34445689999999999999 55554321 1 1247766
Q ss_pred EEeCCCCCCCCCEEEEeeecCCCCC------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCC
Q 007484 134 RISSTDSQDTDPSVLMNGHFDGPLS------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELF 201 (602)
Q Consensus 134 ~i~g~~~~~~~~~vll~aH~Dsv~~------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~g 201 (602)
+. .+.|++.+|+|++|. ++|+.|+++|++++|++++.|.+. .++++|.|+|..+||.|
T Consensus 53 ---~~-----~~~i~l~~H~D~vp~~~~~~~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~dEE~g 122 (347)
T PRK08652 53 ---NS-----KAELFVEVHYDTVPVRAEFFVDGVYVYGTGACDAKGGVAAILLALEELGKE--FEDLNVGIAFVSDEEEG 122 (347)
T ss_pred ---CC-----CCEEEEEccccccCCCCCCEEECCEEEeccchhhhHHHHHHHHHHHHHhhc--ccCCCEEEEEecCcccC
Confidence 32 256999999999985 479999999999999999999864 34679999999999998
Q ss_pred ccchHHHHhhcCccCceeEEEEeccC
Q 007484 202 MLGAHGFMKAHKWRDSVGAVINVEAS 227 (602)
Q Consensus 202 l~GS~~f~~~h~~~~~i~a~INLD~~ 227 (602)
..|++.++++++ ...+|..|..
T Consensus 123 ~~G~~~~~~~~~----~d~~i~~ep~ 144 (347)
T PRK08652 123 GRGSALFAERYR----PKMAIVLEPT 144 (347)
T ss_pred ChhHHHHHHhcC----CCEEEEecCC
Confidence 899999988643 2577878863
No 49
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.16 E-value=7.1e-10 Score=117.53 Aligned_cols=146 Identities=23% Similarity=0.268 Sum_probs=108.0
Q ss_pred ccHHHHHHHHHHHHHhcCCCCCCChhHH-HHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccc
Q 007484 51 FSEARAIQHVRVLADEIGDRQEGRPGLR-EAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHT 129 (602)
Q Consensus 51 Fs~era~~~L~~La~~ig~R~~gS~~~e-~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~ 129 (602)
-+.+|.++.++-.+. -|. ++.. ..++|+.++.+.++... ..++... ...
T Consensus 26 ~~v~~f~eylRi~Tv--~p~----~dy~~a~~~Fl~~~a~~l~l~~---~~i~~~p---------------------~~~ 75 (420)
T KOG2275|consen 26 ISVTRFREYLRIPTV--QPN----PDYTIACADFLKKYAKSLGLTV---QKIESEP---------------------GKY 75 (420)
T ss_pred hHHHHHHHHhhcccc--ccC----CCccHHHHHHHHHHHHhcCCce---eEEEecC---------------------cee
Confidence 345666666665542 222 2223 78899999999998433 1222211 145
Q ss_pred eEEEEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 007484 130 NIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPR 188 (602)
Q Consensus 130 NVi~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~ 188 (602)
+++.+++|++| +-+.|++++|.|+||. +.|+.|+++-++++||++|.|+.+|.+|+|
T Consensus 76 ~~l~T~~GS~P--~L~silL~SH~DVVP~f~e~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~R 153 (420)
T KOG2275|consen 76 VLLYTWLGSDP--ELPSILLNSHTDVVPVFREKWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKR 153 (420)
T ss_pred EEEEEeeCCCC--CccceeeeccccccCCCcccCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCc
Confidence 99999999875 3466999999999986 579999999999999999999999999999
Q ss_pred CEEEEEeCcccCC-ccchHHHHhhcCccCceeEEEEeccCCC
Q 007484 189 PIIFLFNGAEELF-MLGAHGFMKAHKWRDSVGAVINVEASGT 229 (602)
Q Consensus 189 ~I~flf~~aEE~g-l~GS~~f~~~h~~~~~i~a~INLD~~G~ 229 (602)
+|.+.|--+||.| -.|.+.|++ +..-++.....-+|-.|.
T Consensus 154 ti~lsfvpDEEi~G~~Gm~~fa~-~~~~~~l~~~filDEG~~ 194 (420)
T KOG2275|consen 154 TIHLSFVPDEEIGGHIGMKEFAK-TEEFKKLNLGFILDEGGA 194 (420)
T ss_pred eEEEEecCchhccCcchHHHHhh-hhhhcccceeEEecCCCC
Confidence 9999999999986 789999987 332344445566665443
No 50
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.16 E-value=5.7e-10 Score=119.79 Aligned_cols=138 Identities=20% Similarity=0.192 Sum_probs=101.2
Q ss_pred HHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEE
Q 007484 56 AIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRI 135 (602)
Q Consensus 56 a~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i 135 (602)
+.+.+++|. + .+..|+.++++++|+.++|+++| ++++..+. ....|+++++
T Consensus 4 ~~~~l~~Lv-~---ips~s~~e~~~~~~l~~~l~~~G------~~~~~~~~-------------------~~~~n~~~~~ 54 (375)
T PRK13009 4 VLELAQDLI-R---RPSVTPDDAGCQDLLAERLEALG------FTCERMDF-------------------GDVKNLWARR 54 (375)
T ss_pred HHHHHHHHh-C---CCCCCCchhhHHHHHHHHHHHcC------CeEEEecc-------------------CCCcEEEEEe
Confidence 556677776 3 33345566789999999999998 44432211 1235999987
Q ss_pred eCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEE
Q 007484 136 SSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLF 194 (602)
Q Consensus 136 ~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf 194 (602)
|. +.+.|++++|+|+||. ++|+.|+++|+++++++++.+.+.+.+++++|+|++
T Consensus 55 -g~----~~~~i~l~~H~D~Vp~g~~~~w~~~Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~ 129 (375)
T PRK13009 55 -GT----EGPHLCFAGHTDVVPPGDLEAWTSPPFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLI 129 (375)
T ss_pred -cC----CCCEEEEEeecccCCCCCcccCCCCCCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEE
Confidence 43 2367999999999984 358999999999999999999888777889999999
Q ss_pred eCcccCCc-cchHHHHhhcC-ccCceeEEEEeccC
Q 007484 195 NGAEELFM-LGAHGFMKAHK-WRDSVGAVINVEAS 227 (602)
Q Consensus 195 ~~aEE~gl-~GS~~f~~~h~-~~~~i~a~INLD~~ 227 (602)
+.+||.+. .|++.+++... ...+..++|..|..
T Consensus 130 ~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep~ 164 (375)
T PRK13009 130 TSDEEGPAINGTVKVLEWLKARGEKIDYCIVGEPT 164 (375)
T ss_pred EeecccccccCHHHHHHHHHHcCcCCCEEEEcCCC
Confidence 99999854 69998876421 12245666666643
No 51
>PRK07205 hypothetical protein; Provisional
Probab=99.15 E-value=5e-10 Score=123.41 Aligned_cols=128 Identities=13% Similarity=0.175 Sum_probs=97.4
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCC--------hhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccc
Q 007484 52 SEARAIQHVRVLADEIGDRQEGR--------PGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISL 123 (602)
Q Consensus 52 s~era~~~L~~La~~ig~R~~gS--------~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~ 123 (602)
+.+++.+.|++|. +|.+-. +. ++..++.+|+.++++++| +++++++ .|
T Consensus 9 ~~~~~~~~l~~lv-~i~S~s-~~~~~~~~~~~~~~~~~~~~~~~l~~~g------~~~~~~~---~~------------- 64 (444)
T PRK07205 9 VQDACVAAIKTLV-SYPSVL-NEGENGTPFGQAIQDVLEATLDLCQGLG------FKTYLDP---KG------------- 64 (444)
T ss_pred hHHHHHHHHHHHc-cccccc-CCCcCCCCCchhHHHHHHHHHHHHHhCC------CEEEEcC---CC-------------
Confidence 4567778888887 455421 11 223578899999999998 4554431 11
Q ss_pred cccccceEEEEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhc
Q 007484 124 GYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDS 182 (602)
Q Consensus 124 ~y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~ 182 (602)
.|+++++ |+ +++.|++++|+|+||. ++|+.|+++|++++|++++.+++.
T Consensus 65 -----~~~~~~~-g~----~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~ 134 (444)
T PRK07205 65 -----YYGYAEI-GQ----GEELLAILCHLDVVPEGDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDA 134 (444)
T ss_pred -----eEEEEEe-cC----CCcEEEEEEeeccCCCCCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHc
Confidence 2556655 42 2357999999999974 469999999999999999999998
Q ss_pred CCCCCCCEEEEEeCcccCCccchHHHHhhcC
Q 007484 183 GWIPPRPIIFLFNGAEELFMLGAHGFMKAHK 213 (602)
Q Consensus 183 ~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~ 213 (602)
+.+++++|.|+|.++||.|..|++.|+++.+
T Consensus 135 ~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~~ 165 (444)
T PRK07205 135 GVQFNKRIRFIFGTDEETLWRCMNRYNEVEE 165 (444)
T ss_pred CCCCCCcEEEEEECCcccCcccHHHHHhCCC
Confidence 8888999999999999999999999987543
No 52
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.15 E-value=7.7e-10 Score=119.65 Aligned_cols=149 Identities=23% Similarity=0.234 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEE
Q 007484 53 EARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi 132 (602)
.+++.+.+++|. +|.+-.....+++++++||.++++++| ++++++... .+... .......|++
T Consensus 5 ~~~~~~~l~~lv-~i~S~s~~~~~~~~~a~~l~~~l~~~G------~~~~~~~~~-~~~~~---------~~~~~~~~~~ 67 (394)
T PRK08651 5 MFDIVEFLKDLI-KIPTVNPPGENYEEIAEFLRDTLEELG------FSTEIIEVP-NEYVK---------KHDGPRPNLI 67 (394)
T ss_pred HHHHHHHHHHHh-cCCccCCCCcCHHHHHHHHHHHHHHcC------CeEEEEecC-ccccc---------cccCCcceEE
Confidence 467888899998 565532111344589999999999999 555544321 11100 0001245888
Q ss_pred EEEeCCCCCCCCCEEEEeeecCCCCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 007484 133 MRISSTDSQDTDPSVLMNGHFDGPLS--------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (602)
Q Consensus 133 ~~i~g~~~~~~~~~vll~aH~Dsv~~--------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~f 192 (602)
++. |. +++.|++.+|+|+||. ++|+.|++.|++++|++++.+++.+ +++|.|
T Consensus 68 ~~~-~~----~~~~ill~~HlDtvp~~~~~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~ 139 (394)
T PRK08651 68 ARR-GS----GNPHLHFNGHYDVVPPGEGWSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNIEL 139 (394)
T ss_pred EEe-CC----CCceEEEEeeeeeecCCCCccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CCCEEE
Confidence 865 32 1267999999999974 3588999999999999999998764 789999
Q ss_pred EEeCcccCCccchHHHHhhcCccCceeEEEEeccCC
Q 007484 193 LFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 193 lf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
+|..+||.|..|++.++++... +...++..|..+
T Consensus 140 ~~~~~EE~g~~G~~~~~~~~~~--~~d~~i~~~~~~ 173 (394)
T PRK08651 140 AIVPDEETGGTGTGYLVEEGKV--TPDYVIVGEPSG 173 (394)
T ss_pred EEecCccccchhHHHHHhccCC--CCCEEEEecCCC
Confidence 9999999988999999986543 246677777554
No 53
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=99.15 E-value=2.1e-10 Score=118.66 Aligned_cols=155 Identities=24% Similarity=0.223 Sum_probs=109.0
Q ss_pred cceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCc-----
Q 007484 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFM----- 202 (602)
Q Consensus 128 ~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl----- 202 (602)
..|+|+.=.+ .+..++++||.|||. .|+.||-.|++...++++.|...+ ..+-++.|++||.|+
T Consensus 178 ~y~~Ia~~~~-----en~vv~i~AH~DHW~--~G~tDN~lg~~~AV~~~~~lr~~~----~~~~lv~FtAEE~g~p~~~s 246 (486)
T COG4882 178 DYNVIAVDGG-----ENGVVLIGAHLDHWY--TGFTDNILGVAQAVETAGRLRGRG----LAAGLVVFTAEEHGMPGMAS 246 (486)
T ss_pred EEEEEEecCC-----CCCceEEeechhhhh--hcccchhhhHHHHHHHHHHHhhcC----cceeEEEEeccccCCCCCcc
Confidence 4566664443 245799999999999 799999999999999999997643 346788899999887
Q ss_pred ----cchHHHHhhcCccCceeEEEEeccCCCCCCceEEecCCCCChhhhhhhhhcccccccccccccCCCCCCCchHHHh
Q 007484 203 ----LGAHGFMKAHKWRDSVGAVINVEASGTGGLDLVCQSGPSSWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFS 278 (602)
Q Consensus 203 ----~GS~~f~~~h~~~~~i~a~INLD~~G~gg~~~lfq~gp~~~~~~~y~~~~~~p~~~~~~~e~f~~ips~tD~~~F~ 278 (602)
.||+.|.++.+-.+.+.+.+|+|.+|.+... ..+-| .+.+.-.+..+.. .-.++. .+|-..+.
T Consensus 247 fyWa~GSr~~lk~~k~~~~v~~~VN~Dv~g~~~lv--~~~~P--~L~e~~~~~g~~~---vespe~------y~Ds~~y~ 313 (486)
T COG4882 247 FYWAAGSRGLLKESKAAEEVEAYVNFDVAGYRCLV--ASGAP--QLVEHALEAGAVE---VESPEP------YCDSIMYA 313 (486)
T ss_pred eeecccchHHHhhcCCchhhhheeccccccccchh--hhcCh--HHHHHHHHhCCce---ecCCCc------ccchhhhh
Confidence 4899999988878999999999999876532 22223 2333211111000 000111 35556665
Q ss_pred hcCCCCcEEEEEeecC---CCcCCCcccccCCC
Q 007484 279 QDYGDIPGLDIIFLIG---GYYYHTSHDTVDRL 308 (602)
Q Consensus 279 ~~~~GIPgld~a~~~~---~~~YHT~~Dt~d~i 308 (602)
+ .|||++.+....+ +..|||+.||+...
T Consensus 314 ~--aGiPS~Ti~SL~~~~~~e~yh~p~Dtpa~~ 344 (486)
T COG4882 314 W--AGIPSLTIHSLWCPGVQEAYHTPRDTPASW 344 (486)
T ss_pred h--cCCCeeEeeeccCCCccceecCCCCCchhH
Confidence 4 7999999876654 45899999999533
No 54
>PRK06156 hypothetical protein; Provisional
Probab=99.14 E-value=1.3e-09 Score=122.69 Aligned_cols=136 Identities=19% Similarity=0.182 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHhcCCCC-CC-C----hhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccc
Q 007484 54 ARAIQHVRVLADEIGDRQ-EG-R----PGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRN 127 (602)
Q Consensus 54 era~~~L~~La~~ig~R~-~g-S----~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~ 127 (602)
+++.+.+++|. +|.+-. .+ + ++..+..+||.+++++.| ++++. . +
T Consensus 46 ~~~~~~l~~lv-~i~S~~~~~~~~~e~~~~~~~~~~l~~~l~~~G------~~~~~----~-~----------------- 96 (520)
T PRK06156 46 AAAIESLRELV-AFPTVRVEGVPQHENPEFIGFKKLLKSLARDFG------LDYRN----V-D----------------- 96 (520)
T ss_pred HHHHHHHHHhc-CcCcccCCCCCccCCccHHHHHHHHHHHHHHCC------CeEEe----c-C-----------------
Confidence 56677777777 454421 11 1 122356799999999988 33321 0 1
Q ss_pred cceEE-EEEeCCCCCCCCCEEEEeeecCCCCC-------------------------CCCCCCChhHHHHHHHHHHHHHh
Q 007484 128 HTNIV-MRISSTDSQDTDPSVLMNGHFDGPLS-------------------------SPGAGDCGSCVASMLELARLTID 181 (602)
Q Consensus 128 ~~NVi-~~i~g~~~~~~~~~vll~aH~Dsv~~-------------------------~pGA~D~~sGva~~LE~ar~L~~ 181 (602)
.|++ ++++|++ ++.|++++|+|+||. ++|+.|++.|+++++++++.|.+
T Consensus 97 -~~v~~~~~~g~~----~~~l~l~gH~DvVp~~~~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~~l~~ 171 (520)
T PRK06156 97 -NRVLEIGLGGSG----SDKVGILTHADVVPANPELWVLDGTRLDPFKVTLVGDRLYGRGTEDDKGAIVTALYAMKAIKD 171 (520)
T ss_pred -CeEEEEEecCCC----CCeEEEEEecCccCCCCccCccCCccCCCCceEEECCEEEEcCcccchHHHHHHHHHHHHHHH
Confidence 1444 6777642 357999999999973 35899999999999999999988
Q ss_pred cCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEecc
Q 007484 182 SGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEA 226 (602)
Q Consensus 182 ~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~ 226 (602)
.+.+++++|.|+|..+||.|..|++.++.++. ..+..+|+|.
T Consensus 172 ~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~~~~~D~ 213 (520)
T PRK06156 172 SGLPLARRIELLVYTTEETDGDPLKYYLERYT---PPDYNITLDA 213 (520)
T ss_pred cCCCCCceEEEEEecccccCchhHHHHHHhcC---CCCeEEeeCC
Confidence 88788899999999999999999999998653 3467788885
No 55
>PRK05111 acetylornithine deacetylase; Provisional
Probab=99.14 E-value=8.9e-10 Score=118.69 Aligned_cols=140 Identities=23% Similarity=0.257 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCh-----hHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccccccccccccccccc
Q 007484 54 ARAIQHVRVLADEIGDRQEGRP-----GLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNH 128 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~-----~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~ 128 (602)
++..+.+++|. ++.+.. +.+ +++++++||.+.|+++| ++++++.. .+ ..+.
T Consensus 5 ~~~i~~l~~lv-~i~s~s-~~e~~~~~~~~~~~~~l~~~l~~~g------~~~~~~~~--~~--------------~~~~ 60 (383)
T PRK05111 5 PSFIEMYRALI-ATPSIS-ATDPALDQSNRAVIDLLAGWFEDLG------FNVEIQPV--PG--------------TRGK 60 (383)
T ss_pred hHHHHHHHHHh-CcCCcC-CCCcccccchHHHHHHHHHHHHHCC------CeEEEEec--CC--------------CCCC
Confidence 46788888888 555422 221 23579999999999998 45554321 11 0123
Q ss_pred ceEEEEEeCCCCCCCCCEEEEeeecCCCCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 007484 129 TNIVMRISSTDSQDTDPSVLMNGHFDGPLS--------------------SPGAGDCGSCVASMLELARLTIDSGWIPPR 188 (602)
Q Consensus 129 ~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~--------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~ 188 (602)
.|+++++ |.+ ++.|++.+|+|+||. ++|+.|++++++++|++++.|.+. .+++
T Consensus 61 ~nvia~~-g~~----~~~il~~~H~Dvvp~~~~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~ 133 (383)
T PRK05111 61 FNLLASL-GSG----EGGLLLAGHTDTVPFDEGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLT--KLKK 133 (383)
T ss_pred ceEEEEe-CCC----CCeEEEEeeeceecCCCCcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhc--CCCC
Confidence 5999999 432 135999999999963 579999999999999999999864 3567
Q ss_pred CEEEEEeCcccCCccchHHHHhhcCccCceeEEEEecc
Q 007484 189 PIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEA 226 (602)
Q Consensus 189 ~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~ 226 (602)
+|+|+|.++||.|..|++.++++... +...+|.-|.
T Consensus 134 ~i~~~~~~~EE~g~~G~~~~~~~~~~--~~d~~i~~ep 169 (383)
T PRK05111 134 PLYILATADEETSMAGARAFAEATAI--RPDCAIIGEP 169 (383)
T ss_pred CeEEEEEeccccCcccHHHHHhcCCC--CCCEEEEcCC
Confidence 89999999999999999999975432 2345565553
No 56
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.13 E-value=9.5e-10 Score=117.04 Aligned_cols=134 Identities=21% Similarity=0.235 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcc-cccCCCceeEEEEeeeecCccccccccccccccccccceE
Q 007484 53 EARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGI-KERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNI 131 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~i-g~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NV 131 (602)
++++.+.+++|. ++.. .|..++++++||.++++++ + ++++ .. ..|+
T Consensus 6 ~~~~~~~l~~li-~ips---~s~~e~~~~~~l~~~l~~~~~------~~~~--~~---------------------~~~~ 52 (352)
T PRK13007 6 AADLAELTAALV-DIPS---VSGDEKALADAVEAALRALPH------LEVI--RH---------------------GNSV 52 (352)
T ss_pred HHHHHHHHHHHh-cCCC---CCchHHHHHHHHHHHHHhCcC------ceEE--ec---------------------CCeE
Confidence 356788888887 3333 3445568999999999996 4 2222 10 1389
Q ss_pred EEEEeCCCCCCCCCEEEEeeecCCCCC--------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCc
Q 007484 132 VMRISSTDSQDTDPSVLMNGHFDGPLS--------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGA 197 (602)
Q Consensus 132 i~~i~g~~~~~~~~~vll~aH~Dsv~~--------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~a 197 (602)
++++.+.. .+.|++++|+|+||. ++|+.|+++|+|++|.+++.+. +++++|.|+|.++
T Consensus 53 ~~~~~~~~----~~~i~l~~H~Dtvp~~~~~~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~ 124 (352)
T PRK13007 53 VARTDLGR----PSRVVLAGHLDTVPVADNLPSRREGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDC 124 (352)
T ss_pred EEEccCCC----CCeEEEEccccccCCCCCCCcceeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEec
Confidence 99984321 235999999999984 4799999999999999999994 3678999999999
Q ss_pred ccCCc--cchHHHHhhcCccCceeEEEEeccC
Q 007484 198 EELFM--LGAHGFMKAHKWRDSVGAVINVEAS 227 (602)
Q Consensus 198 EE~gl--~GS~~f~~~h~~~~~i~a~INLD~~ 227 (602)
||.|. .|+..++.+++...+.+++|+.|..
T Consensus 125 EE~~~~~~G~~~~~~~~~~~~~~d~~i~~ep~ 156 (352)
T PRK13007 125 EEVEAEANGLGRLAREHPEWLAGDFAILLEPT 156 (352)
T ss_pred ccccCCcccHHHHHHhcccccCCCEEEEecCC
Confidence 99864 5888888766544567889998863
No 57
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=99.13 E-value=2.1e-09 Score=113.42 Aligned_cols=199 Identities=20% Similarity=0.185 Sum_probs=134.8
Q ss_pred cccccceEEEEEe-CCC---CCCCCCEEEEeeecCCCCC----CCCCCCChhHHHHHHHHHHHHHhc----CCCCCCCEE
Q 007484 124 GYRNHTNIVMRIS-STD---SQDTDPSVLMNGHFDGPLS----SPGAGDCGSCVASMLELARLTIDS----GWIPPRPII 191 (602)
Q Consensus 124 ~y~~~~NVi~~i~-g~~---~~~~~~~vll~aH~Dsv~~----~pGA~D~~sGva~~LE~ar~L~~~----~~~p~~~I~ 191 (602)
.-..+.||.++++ |-. +.++-|.|++.||||+... ++||+-||+|++++||++|.+.+- ..+++.++.
T Consensus 189 ~s~ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap~lsvgADSNGSGvvaLLelarlfSkly~ypsTrakYnLl 268 (555)
T KOG2526|consen 189 PSYKILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAPGLSVGADSNGSGVVALLELARLFSKLYDYPSTRAKYNLL 268 (555)
T ss_pred CCCccceEEeecccccccccccccCCeEEEEEeccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHhcCcccccceeEE
Confidence 3456789999998 422 1235689999999999754 579999999999999999999763 346788999
Q ss_pred EEEeCcccCCccchHHHHhhc--CccCceeEEEEeccCCCCCCceE-EecCCC--CChh-hhhh---hhhcccccccccc
Q 007484 192 FLFNGAEELFMLGAHGFMKAH--KWRDSVGAVINVEASGTGGLDLV-CQSGPS--SWPS-SVYA---QSAIYPMAHSAAQ 262 (602)
Q Consensus 192 flf~~aEE~gl~GS~~f~~~h--~~~~~i~a~INLD~~G~gg~~~l-fq~gp~--~~~~-~~y~---~~~~~p~~~~~~~ 262 (602)
|+..+|--...+|++.|++-. ..++++..+|++|.+|.+...+. -.+.|. .-.+ +.++ ..+++-......
T Consensus 269 F~lt~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLdtig~~~s~l~mHvsKpP~dnt~i~qffr~l~svAek~~~~v~~- 347 (555)
T KOG2526|consen 269 FILTAAGKLNYQGTKKWLEFDDADLQKNVDFAICLDTIGRKTSGLFMHVSKPPSDNTVIAQFFRRLNSVAEKKNIEVVT- 347 (555)
T ss_pred EEEccCccccccchhhhhhcchHHHHhcccEEEEhhhhccccCceEEEccCCCCcchHHHHHHHHhhhhchhcceEEEE-
Confidence 999999999999999999833 34689999999999999855543 333332 1122 2222 111111100000
Q ss_pred cccCCCCC-----CCchHHHhhcCCCCcEEEEEeecCC--CcCCCcc-cccCCCCHHHHHHHHHHHHHHHHH
Q 007484 263 DVFPVIPG-----DTDYRIFSQDYGDIPGLDIIFLIGG--YYYHTSH-DTVDRLLPGSVQARGDNLFNVLKA 326 (602)
Q Consensus 263 e~f~~ips-----~tD~~~F~~~~~GIPgld~a~~~~~--~~YHT~~-Dt~d~id~~~lq~~g~~~l~l~~~ 326 (602)
.-..+.- .=.|..|.. ..+|++.+...... ..-.+.. |+...+|.+++-+..+.+.+.+-.
T Consensus 348 -khkkInla~s~lAWEHErFsi--kR~pAfTLS~l~Sprdp~rnsi~~d~rsrldedtLi~ntRlIaEAla~ 416 (555)
T KOG2526|consen 348 -KHKKINLASSRLAWEHERFSI--KRMPAFTLSTLPSPRDPARNSILLDLRSRLDEDTLIDNTRLIAEALAG 416 (555)
T ss_pred -EeeeEeeccchhhhhhhhhhh--hcccceeeccCCCCcchhhccccccchhhhhhhhhhhhhhHHHHHHHH
Confidence 0011111 224778865 68999988766443 2455666 999999999888776666554443
No 58
>PRK08554 peptidase; Reviewed
Probab=99.11 E-value=1.4e-09 Score=119.98 Aligned_cols=140 Identities=21% Similarity=0.214 Sum_probs=103.0
Q ss_pred HHHHHHHHHHhcCCCCCC---ChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEE
Q 007484 56 AIQHVRVLADEIGDRQEG---RPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (602)
Q Consensus 56 a~~~L~~La~~ig~R~~g---S~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi 132 (602)
+.+.+++|. +|.+...+ ..+..++++|+.+++++.| ++++..+. . +..|++
T Consensus 3 ~~~~l~~LV-~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~--~-----------------~~~~l~ 56 (438)
T PRK08554 3 VLELLSSLV-SFETVNDPSKGIKPSKECPKFIKDTLESWG------IESELIEK--D-----------------GYYAVY 56 (438)
T ss_pred HHHHHHHHh-CCCCCCCcccCcchHHHHHHHHHHHHHHCC------CeEEEEec--C-----------------CceEEE
Confidence 567788887 55542212 2234689999999999998 44443221 1 124888
Q ss_pred EEEeCCCCCCCCCEEEEeeecCCCCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 007484 133 MRISSTDSQDTDPSVLMNGHFDGPLS--------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (602)
Q Consensus 133 ~~i~g~~~~~~~~~vll~aH~Dsv~~--------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~f 192 (602)
+++. . +++.|++.+|+|+||. ++|+.|+++|++++|.+++.|++. .++++|.|
T Consensus 57 ~~~~-~----~~~~l~l~gH~DtVp~~~~~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~--~~~~~i~l 129 (438)
T PRK08554 57 GEIG-E----GKPKLLFMAHFDVVPVNPEEWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKE--PLNGKVIF 129 (438)
T ss_pred EEeC-C----CCCEEEEEeccccCCCCccccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhc--CCCCCEEE
Confidence 8873 2 2356999999999974 479999999999999999999874 36788999
Q ss_pred EEeCcccCCccchHHHHhhcC-ccCceeEEEEeccCC
Q 007484 193 LFNGAEELFMLGAHGFMKAHK-WRDSVGAVINVEASG 228 (602)
Q Consensus 193 lf~~aEE~gl~GS~~f~~~h~-~~~~i~a~INLD~~G 228 (602)
+++++||.|..++..++++.. ...+.+++|+.|..+
T Consensus 130 ~~~~dEE~g~~~~~~~~~~~~~~~~~~~~~iv~Ept~ 166 (438)
T PRK08554 130 AFTGDEEIGGAMAMHIAEKLREEGKLPKYMINADGIG 166 (438)
T ss_pred EEEcccccCccccHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 999999999887777666432 235678899999854
No 59
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=99.10 E-value=1.2e-09 Score=119.05 Aligned_cols=142 Identities=23% Similarity=0.248 Sum_probs=111.7
Q ss_pred HHHHHHHHHHhcCCCCCCC-hhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEE
Q 007484 56 AIQHVRVLADEIGDRQEGR-PGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMR 134 (602)
Q Consensus 56 a~~~L~~La~~ig~R~~gS-~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~ 134 (602)
..+.+++|. .+++-| .++.++++|+.++++++| +.++.+....+. ...|++++
T Consensus 15 ~~~~l~~lv----~~~s~s~~~~~~~~~~l~~~l~~~g------~~~~~~~~~~~~----------------~~~n~~~~ 68 (409)
T COG0624 15 ILELLKELV----RIPSVSAGEEAEAAELLAEWLEELG------FEVEEDEVGPGP----------------GRPNLVAR 68 (409)
T ss_pred HHHHHHHHh----cCCCCCcccchHHHHHHHHHHHHcC------CceEEeecCCCC----------------CceEEEEE
Confidence 445666665 334444 666799999999999998 444444322110 34599999
Q ss_pred EeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEE
Q 007484 135 ISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFL 193 (602)
Q Consensus 135 i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~fl 193 (602)
+.+.++ ++.|++++|+|+||. ++|+.|++.++++++.+++.+.+.+..++.+|.++
T Consensus 69 ~~~~~~---~~~l~l~~H~DvVP~g~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~ 145 (409)
T COG0624 69 LGGGDG---GPTLLLGGHLDVVPAGGGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLL 145 (409)
T ss_pred ecCCCC---CCeEEEeccccccCCCCcccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 988642 278999999999986 35999999999999999999999877888999999
Q ss_pred EeCcccCCccchHHHHhhcC--ccCceeEEEEecc
Q 007484 194 FNGAEELFMLGAHGFMKAHK--WRDSVGAVINVEA 226 (602)
Q Consensus 194 f~~aEE~gl~GS~~f~~~h~--~~~~i~a~INLD~ 226 (602)
+.++||.|..|...+..++. ...+..+.|..|.
T Consensus 146 ~~~dEE~g~~~~~~~~~~~~~~~~~~~d~~i~~E~ 180 (409)
T COG0624 146 FTADEESGGAGGKAYLEEGEEALGIRPDYEIVGEP 180 (409)
T ss_pred EEeccccCCcchHHHHHhcchhhccCCCEEEeCCC
Confidence 99999999999999998764 2457788888887
No 60
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=99.09 E-value=1.1e-09 Score=121.47 Aligned_cols=126 Identities=17% Similarity=0.176 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHhcCCCCC---------CChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccccccccccccc
Q 007484 54 ARAIQHVRVLADEIGDRQE---------GRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLG 124 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~---------gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~ 124 (602)
+.+.+.|++|. +|.+-.. ..++.+++++|+.+.++++| ++++..+
T Consensus 13 ~~~~~~l~~lv-~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G------~~~~~~~------------------- 66 (466)
T TIGR01886 13 DALLEDLEELL-RIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDG------FTTKNFD------------------- 66 (466)
T ss_pred HHHHHHHHHHh-CCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCC------CeEEEec-------------------
Confidence 34566777776 4443211 12345579999999999999 4444311
Q ss_pred ccccceEEEEEeCCCCCCCCCEEEEeeecCCCCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCC
Q 007484 125 YRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS-------------------SPGAGDCGSCVASMLELARLTIDSGWI 185 (602)
Q Consensus 125 y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~-------------------~pGA~D~~sGva~~LE~ar~L~~~~~~ 185 (602)
|+++++.+. .+++.|++.+|+|+||. ++|+.||++|+++++.+++.|++.+.+
T Consensus 67 -----~~~~~~~~~---~~~~~l~~~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~ 138 (466)
T TIGR01886 67 -----NYAGHVEYG---AGDERLGIIGHMDVVPAGEGWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLP 138 (466)
T ss_pred -----CCceeEEec---CCCCEEEEEeecccCCCCCCCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCC
Confidence 333333222 12467999999999975 579999999999999999999998888
Q ss_pred CCCCEEEEEeCcccCCccchHHHHhhcC
Q 007484 186 PPRPIIFLFNGAEELFMLGAHGFMKAHK 213 (602)
Q Consensus 186 p~~~I~flf~~aEE~gl~GS~~f~~~h~ 213 (602)
++++|+|++.++||.|..|++.++++++
T Consensus 139 ~~~~i~~~~~~dEE~g~~g~~~~~~~~~ 166 (466)
T TIGR01886 139 PSKKIRFVVGTNEETGWVDMDYYFKHEE 166 (466)
T ss_pred CCCCEEEEEECccccCcccHHHHHhcCc
Confidence 8999999999999999999999998654
No 61
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=99.07 E-value=1.9e-09 Score=115.62 Aligned_cols=135 Identities=19% Similarity=0.167 Sum_probs=98.5
Q ss_pred HHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEEeC
Q 007484 58 QHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISS 137 (602)
Q Consensus 58 ~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g 137 (602)
+.+++|. ++ +..|.++.++++||.++|+++| +++++.+. + +..|++++. |
T Consensus 3 ~~l~~lv-~i---ps~s~~e~~~~~~i~~~l~~~G------~~~~~~~~--~-----------------~~~~~~~~~-g 52 (370)
T TIGR01246 3 ELAKELI-SR---PSVTPNDAGCQDIIAERLEKLG------FEIEWMHF--G-----------------DTKNLWATR-G 52 (370)
T ss_pred HHHHHHh-cC---CCCCcchHHHHHHHHHHHHHCC------CEEEEEec--C-----------------CCceEEEEe-c
Confidence 4566666 33 3345556689999999999999 45443321 1 124899985 3
Q ss_pred CCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeC
Q 007484 138 TDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNG 196 (602)
Q Consensus 138 ~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~ 196 (602)
. +.+.|++.+|+|+||. ++|+.|++.|+++++++++.+.+.+.+++++|+|+|..
T Consensus 53 ~----~~~~i~~~~H~DtVp~~~~~~W~~~p~~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~ 128 (370)
T TIGR01246 53 T----GEPVLAFAGHTDVVPAGPEEQWSSPPFEPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITS 128 (370)
T ss_pred C----CCcEEEEEccccccCCCCccccccCCCCcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEe
Confidence 2 2367999999999975 35889999999999999999988777778899999999
Q ss_pred cccCCc-cchHHHHhhcCc-cCceeEEEEecc
Q 007484 197 AEELFM-LGAHGFMKAHKW-RDSVGAVINVEA 226 (602)
Q Consensus 197 aEE~gl-~GS~~f~~~h~~-~~~i~a~INLD~ 226 (602)
+||.+. .|++.+.+.... ..+...++..|.
T Consensus 129 dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep 160 (370)
T TIGR01246 129 DEEGTAIDGTKKVVETLMARDELIDYCIVGEP 160 (370)
T ss_pred ccccCCCcCHHHHHHHHHhcCCCCCEEEEcCC
Confidence 999864 699988763311 124566776664
No 62
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.06 E-value=9.3e-09 Score=109.20 Aligned_cols=154 Identities=24% Similarity=0.204 Sum_probs=98.4
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccCCCCCCce------E
Q 007484 162 AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGGLDL------V 235 (602)
Q Consensus 162 A~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G~gg~~~------l 235 (602)
|-||..||++++|++|.| + +..++.++.|+|+.-||.|+.|++....+ -+....|.+|..+.+...- .
T Consensus 178 alDdR~gva~lle~lk~l-~-~~~~~~~vy~v~tvqEEVGlrGA~~~a~~----i~pd~aiavd~~~~~d~~~~~~~~~~ 251 (355)
T COG1363 178 ALDDRAGVAALLELLKEL-K-GIELPADVYFVASVQEEVGLRGAKTSAFR----IKPDIAIAVDVTPAGDTPGVPKGDVK 251 (355)
T ss_pred eccchHhHHHHHHHHHHh-c-cCCCCceEEEEEecchhhccchhhccccc----cCCCEEEEEecccccCCCCCcccccc
Confidence 789999999999999999 4 56889999999999999999999987653 3456788888877654311 0
Q ss_pred EecCCCCChhhhhhhhhc-cccc----ccccccc-----cCCCC-CCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccc
Q 007484 236 CQSGPSSWPSSVYAQSAI-YPMA----HSAAQDV-----FPVIP-GDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDT 304 (602)
Q Consensus 236 fq~gp~~~~~~~y~~~~~-~p~~----~~~~~e~-----f~~ip-s~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt 304 (602)
...|| .+..+.++.. +|-. ..++++. ....| .+||-..+...-.|+|...+.... .+-|++.
T Consensus 252 lg~Gp---~i~~~D~~~~~~~~l~~~L~~~A~~~~Ip~Q~~v~~~ggTDA~a~~~~g~gvpta~Igip~--ry~Hs~~-- 324 (355)
T COG1363 252 LGKGP---VIRVKDASGIYHPKLRKFLLELAEKNNIPYQVDVSPGGGTDAGAAHLTGGGVPTALIGIPT--RYIHSPV-- 324 (355)
T ss_pred cCCCC---EEEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEecCCCCccHHHHHHcCCCCceEEEeccc--ccccCcc--
Confidence 00111 0111111000 0100 0011110 01233 588988776544689998876422 2467764
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHhC
Q 007484 305 VDRLLPGSVQARGDNLFNVLKAFSN 329 (602)
Q Consensus 305 ~d~id~~~lq~~g~~~l~l~~~la~ 329 (602)
+.++.+.+.++.+.+.++++++..
T Consensus 325 -e~~~~~D~~~~~~Ll~~~i~~~~~ 348 (355)
T COG1363 325 -EVAHLDDLEATVKLLVAYLESLDR 348 (355)
T ss_pred -eeecHHHHHHHHHHHHHHHHhcch
Confidence 456688888888888888877644
No 63
>PRK13004 peptidase; Reviewed
Probab=99.06 E-value=3.1e-09 Score=115.44 Aligned_cols=135 Identities=21% Similarity=0.160 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeE-EEEeeeecCccccccccccccccccccceEE
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRI-EIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~v-evd~~~~~G~~~~~~~~~~~~~~y~~~~NVi 132 (602)
+++.+.+++|. ++. ..|.+++++++||.++|+++| +++ +++ ...|++
T Consensus 15 ~~~~~~l~~lv-~ip---s~s~~e~~~a~~l~~~l~~~G------~~~~~~~----------------------~~~n~~ 62 (399)
T PRK13004 15 ADMTRFLRDLI-RIP---SESGDEKRVVKRIKEEMEKVG------FDKVEID----------------------PMGNVL 62 (399)
T ss_pred HHHHHHHHHHh-cCC---CCCCchHHHHHHHHHHHHHcC------CcEEEEc----------------------CCCeEE
Confidence 45677777777 333 344455689999999999998 332 111 113899
Q ss_pred EEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEE
Q 007484 133 MRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPII 191 (602)
Q Consensus 133 ~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~ 191 (602)
++++|. ++.|++.+|+|+||. ++|+.||++|++++|.+++.|++.+.+++++|.
T Consensus 63 a~~~~~-----~~~i~~~~H~DtVp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~ 137 (399)
T PRK13004 63 GYIGHG-----KKLIAFDAHIDTVGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLY 137 (399)
T ss_pred EEECCC-----CcEEEEEeccCccCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEE
Confidence 988652 257999999999985 348999999999999999999988877889999
Q ss_pred EEEeCcccC-CccchHHHHhhcCccCceeEEEEeccC
Q 007484 192 FLFNGAEEL-FMLGAHGFMKAHKWRDSVGAVINVEAS 227 (602)
Q Consensus 192 flf~~aEE~-gl~GS~~f~~~h~~~~~i~a~INLD~~ 227 (602)
|+|..+||. +..|++.++++... +...++..|..
T Consensus 138 ~~~~~~EE~~~g~~~~~~~~~~~~--~~d~~i~~e~~ 172 (399)
T PRK13004 138 VTGTVQEEDCDGLCWRYIIEEDKI--KPDFVVITEPT 172 (399)
T ss_pred EEEEcccccCcchhHHHHHHhcCC--CCCEEEEccCC
Confidence 999999996 45677777764322 34566766653
No 64
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.02 E-value=1.5e-09 Score=104.60 Aligned_cols=166 Identities=22% Similarity=0.177 Sum_probs=109.0
Q ss_pred EEeeecCCCCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCcc-chHH
Q 007484 148 LMNGHFDGPLS-------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFML-GAHG 207 (602)
Q Consensus 148 ll~aH~Dsv~~-------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~-GS~~ 207 (602)
++.+|+|+||. ++|+.|+++|+++++.++|.+++.+.+++++|+|+++.+||.|.. |++.
T Consensus 1 ll~~H~Dtv~~~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~~~ 80 (189)
T PF01546_consen 1 LLYAHMDTVPGPEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGAKH 80 (189)
T ss_dssp EEEEES-BCSTGGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHHHH
T ss_pred CccccccccCCcCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchhhh
Confidence 57899999992 689999999999999999999988889999999999999999998 9999
Q ss_pred HHhhc-CccCceeEEEEeccCCCCCCceEEecCCCCChhhhhhhhhcccccccccccccCCCCCCCchHHHhhc-CCCCc
Q 007484 208 FMKAH-KWRDSVGAVINVEASGTGGLDLVCQSGPSSWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFSQD-YGDIP 285 (602)
Q Consensus 208 f~~~h-~~~~~i~a~INLD~~G~gg~~~lfq~gp~~~~~~~y~~~~~~p~~~~~~~e~f~~ips~tD~~~F~~~-~~GIP 285 (602)
++++. ....+....+..|..+.+... ...++.+.+...+.......... .....+..||...+.+. ..++|
T Consensus 81 l~~~~~~~~~~~~~~~~~e~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~tD~~~~~~~~~~~~~ 153 (189)
T PF01546_consen 81 LLEEGAFFGLHPDYVIIGEPTGKGGVG----SDNDPPLVQALQAAAQEVGGEPP---EPVASGGGTDAGFLAEVKGLGIP 153 (189)
T ss_dssp HHHHCEEEEEEESEEEECECETTSEEE----HCTCHHHHHHHHHHHHHTTSSEE---EEEEESSSSTHHHHHCHHHTTEE
T ss_pred hhhhccccccccccccccccccccccc----ccccHHHHHHHHHHHHHHhhccc---cccceeccccchhhhhhhccccc
Confidence 99863 223446677776654433211 11222122222222111111000 01224568999998730 25777
Q ss_pred EEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHH
Q 007484 286 GLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLK 325 (602)
Q Consensus 286 gld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~ 325 (602)
.+.+.... ...|++... ++.+.+....+.+.++++
T Consensus 154 ~i~~G~~~--~~~H~~~E~---i~~~~l~~~~~~~~~~l~ 188 (189)
T PF01546_consen 154 AIGFGPGG--SNAHTPDEY---IDIEDLVKGAKIYAALLE 188 (189)
T ss_dssp EEEEESCE--ESTTSTT-E---EEHHHHHHHHHHHHHHHH
T ss_pred eeeeCCCC--CCCCCCCcE---ecHHHHHHHHHHHHHHHh
Confidence 76554333 578887654 457788887777777664
No 65
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=99.00 E-value=3.9e-09 Score=111.92 Aligned_cols=125 Identities=21% Similarity=0.185 Sum_probs=93.4
Q ss_pred HHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEEeCC
Q 007484 59 HVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISST 138 (602)
Q Consensus 59 ~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g~ 138 (602)
.+++|. ++.+ .|..++++++||+++|+++| ++++.+ ...|+++.. +.
T Consensus 2 ~l~~lv-~i~s---~s~~e~~~~~~l~~~l~~~g------~~~~~~----------------------~~~~~~~~~-~~ 48 (336)
T TIGR01902 2 LLKDLL-EIYS---PSGKEANAAKFLEEISKDLG------LKLIID----------------------DAGNFILGK-GD 48 (336)
T ss_pred hHHHHh-cCCC---CCcchHHHHHHHHHHHHHcC------CEEEEC----------------------CCCcEEEEe-CC
Confidence 356666 3333 23345689999999999998 444221 113777765 22
Q ss_pred CCCCCCCEEEEeeecCCCCC------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchH
Q 007484 139 DSQDTDPSVLMNGHFDGPLS------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAH 206 (602)
Q Consensus 139 ~~~~~~~~vll~aH~Dsv~~------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~ 206 (602)
+.+.|++++|+|+||. ++|+.|+++|+|+++++++.+.+. +.+|.|++..+||.|..|++
T Consensus 49 ----~~~~i~~~~H~D~vp~~~~~~~~~g~i~GrG~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~~G~~ 120 (336)
T TIGR01902 49 ----GHKKILLAGHVDTVPGYIPVKIEGGLLYGRGAVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSSKGAR 120 (336)
T ss_pred ----CCceEEEEccccccCCCcccEEeCCEEEEecccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCCccHH
Confidence 2367999999999974 579999999999999999999764 35899999999999999999
Q ss_pred HHHhhcCccCceeEEEEeccCC
Q 007484 207 GFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 207 ~f~~~h~~~~~i~a~INLD~~G 228 (602)
.+++++. . .++|..|..+
T Consensus 121 ~~~~~~~--~--~~~ii~ept~ 138 (336)
T TIGR01902 121 EVIDKNY--P--FYVIVGEPSG 138 (336)
T ss_pred HHHhhcC--C--CEEEEecCCC
Confidence 9998653 1 2677778644
No 66
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=98.99 E-value=5.9e-09 Score=112.48 Aligned_cols=135 Identities=20% Similarity=0.137 Sum_probs=96.9
Q ss_pred HHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEEeCCC
Q 007484 60 VRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTD 139 (602)
Q Consensus 60 L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g~~ 139 (602)
|++|. +|.+ .|.+++++.+||.++|++++.. .++++.. ..|+++++.+.
T Consensus 2 l~~Lv-~ipS---~s~~e~~~~~~i~~~l~~~g~~-----~~~~~~~---------------------~~nvva~~~~~- 50 (373)
T TIGR01900 2 LQQIM-DIFS---PSDHEGPIADEIEAALNNLELE-----GLEVFRF---------------------GDNVLARTDFG- 50 (373)
T ss_pred hHHHh-CCCC---CCchHHHHHHHHHHHHhhcccc-----CceEEEE---------------------CCEEEEecCCC-
Confidence 45565 3333 2344558999999999988621 1233221 12999997542
Q ss_pred CCCCCCEEEEeeecCCCCC-------------------------------CCCCCCChhHHHHHHHHHHHHHh--cCCCC
Q 007484 140 SQDTDPSVLMNGHFDGPLS-------------------------------SPGAGDCGSCVASMLELARLTID--SGWIP 186 (602)
Q Consensus 140 ~~~~~~~vll~aH~Dsv~~-------------------------------~pGA~D~~sGva~~LE~ar~L~~--~~~~p 186 (602)
+.+.|++++|+|+||. ++|+.|+++|++++|++++.+.+ .+.++
T Consensus 51 ---~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~ 127 (373)
T TIGR01900 51 ---KASRVILAGHIDTVPIADNFPPKWLEPGDSLIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETEL 127 (373)
T ss_pred ---CCCeEEEeCccccccCCCCChhhhccCcccccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCC
Confidence 2356999999999952 35899999999999999999954 34567
Q ss_pred CCCEEEEEeCcccCCc--cchHHHHhhcCccCceeEEEEeccCC
Q 007484 187 PRPIIFLFNGAEELFM--LGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 187 ~~~I~flf~~aEE~gl--~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
+++|.|+|.++||.+. .|+..++++++...+..++|..|..+
T Consensus 128 ~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~~d~~iv~Ept~ 171 (373)
T TIGR01900 128 KHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLAADFAIIGEPTG 171 (373)
T ss_pred CCCEEEEEEecccccCCCCCHHHHHHhCcccccCCEEEEECCCC
Confidence 8899999999999863 59999988664334567788887543
No 67
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=98.96 E-value=8e-09 Score=114.20 Aligned_cols=124 Identities=16% Similarity=0.122 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHhcCCCC----CC-----ChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccc
Q 007484 55 RAIQHVRVLADEIGDRQ----EG-----RPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGY 125 (602)
Q Consensus 55 ra~~~L~~La~~ig~R~----~g-----S~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y 125 (602)
...+.+++|. +|.+-. .+ .++..++.+|+.+++++.| ++++. .
T Consensus 3 ~~i~ll~~Lv-~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g------~~~~~----~----------------- 54 (447)
T TIGR01887 3 EILEDLKELI-RIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDG------FTTEN----V----------------- 54 (447)
T ss_pred HHHHHHHHhc-CcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcC------ceEEE----e-----------------
Confidence 4667777777 444321 11 1234589999999999998 33331 0
Q ss_pred cccceEEEEEeCCCCCCCCCEEEEeeecCCCCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCC
Q 007484 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS-------------------SPGAGDCGSCVASMLELARLTIDSGWIP 186 (602)
Q Consensus 126 ~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~-------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p 186 (602)
.|+.++.+..+ ..+.|++++|+|+||. ++|+.|+++|+++++++++.|++.+.++
T Consensus 55 ---~~~~~~~~~~~---~~~~l~l~gH~D~Vp~~~~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~ 128 (447)
T TIGR01887 55 ---DNYAGYAEYGQ---GEEYLGILGHLDVVPAGDGWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKL 128 (447)
T ss_pred ---cCceEEEEeCC---CCCeEEEEeecCCCCCCCCCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCC
Confidence 13333332211 2356999999999973 4799999999999999999999888888
Q ss_pred CCCEEEEEeCcccCCccchHHHHhhc
Q 007484 187 PRPIIFLFNGAEELFMLGAHGFMKAH 212 (602)
Q Consensus 187 ~~~I~flf~~aEE~gl~GS~~f~~~h 212 (602)
+++|.|+++.+||.|..|+..+++++
T Consensus 129 ~~~i~~~~~~dEE~g~~g~~~~l~~~ 154 (447)
T TIGR01887 129 KKKIRFIFGTDEETGWACIDYYFEHE 154 (447)
T ss_pred CCcEEEEEECCcccCcHhHHHHHHhc
Confidence 99999999999999999999998743
No 68
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=98.96 E-value=3.8e-08 Score=105.10 Aligned_cols=145 Identities=20% Similarity=0.147 Sum_probs=84.0
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccCCC--------CCCc
Q 007484 162 AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGT--------GGLD 233 (602)
Q Consensus 162 A~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G~--------gg~~ 233 (602)
+.||++||+++++++|.+++.+.+++.++.|+|+..||.| .|+. +....+...+|.+|.... +|+.
T Consensus 181 ~~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG-~gaa-----~~i~pd~a~~i~vd~~~~~p~~~~lg~Gp~ 254 (343)
T TIGR03106 181 HLDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVG-SGAS-----HALPPDVAELVSVDNGTVAPGQNSSEHGVT 254 (343)
T ss_pred ecccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccC-ccch-----hcccHhhhccEEEEecccCCCCCcCCCCce
Confidence 5899999999999999999877778899999999999999 5631 111223334467775432 1222
Q ss_pred eE-EecCCC--CChhhhhh---hhhcccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCC
Q 007484 234 LV-CQSGPS--SWPSSVYA---QSAIYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDR 307 (602)
Q Consensus 234 ~l-fq~gp~--~~~~~~y~---~~~~~p~~~~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~ 307 (602)
+. ...++. +.+.+... +...-|+.. +++. ..+||-..+.....|+|...+.. .-+ +=|| .+.
T Consensus 255 i~~~d~~~~~~~~l~~~l~~~A~~~~Ip~Q~----~~~~--~~gtDa~~~~~~~~Gi~t~~i~i-P~R-y~Hs----~e~ 322 (343)
T TIGR03106 255 IAMADSSGPFDYHLTRKLIRLCQDHGIPHRR----DVFR--YYRSDAASAVEAGHDIRTALVTF-GLD-ASHG----YER 322 (343)
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHcCCCcEE----EecC--CCCChHHHHHHcCCCCCEEEeec-ccc-chhh----hhh
Confidence 21 111111 11111111 111223221 2221 13666665533236999887753 222 4566 566
Q ss_pred CCHHHHHHHHHHHHHHH
Q 007484 308 LLPGSVQARGDNLFNVL 324 (602)
Q Consensus 308 id~~~lq~~g~~~l~l~ 324 (602)
++.+.++++.+.+.+++
T Consensus 323 ~~~~D~~~~~~Ll~~~~ 339 (343)
T TIGR03106 323 THIDALEALANLLVAYA 339 (343)
T ss_pred ccHHHHHHHHHHHHHHh
Confidence 77888887777665554
No 69
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=98.88 E-value=3.4e-08 Score=105.97 Aligned_cols=133 Identities=20% Similarity=0.174 Sum_probs=96.4
Q ss_pred HHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEEeC
Q 007484 58 QHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISS 137 (602)
Q Consensus 58 ~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g 137 (602)
+.+++|.+ + |.+ |..++++++||.++|+++| ++++.+ .. ...|+++++++
T Consensus 3 ~~~~~L~~-i-ps~--s~~E~~~a~~l~~~l~~~g------~~~~~~--~~------------------~~~~vva~~~~ 52 (363)
T TIGR01891 3 DIRRHLHE-H-PEL--SFEEFKTSSLIAEALESLG------IEVRRG--VG------------------GATGVVATIGG 52 (363)
T ss_pred HHHHHHhc-C-CCC--CCchHHHHHHHHHHHHHcC------CceEec--CC------------------CCcEEEEEEeC
Confidence 45667773 3 223 3445689999999999998 444321 00 12599999976
Q ss_pred CCCCCCCCEEEEeeecCCCCCC-----------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccC
Q 007484 138 TDSQDTDPSVLMNGHFDGPLSS-----------------PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEEL 200 (602)
Q Consensus 138 ~~~~~~~~~vll~aH~Dsv~~~-----------------pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~ 200 (602)
++ +.+.|++++|+|+||.+ .|+ ++++++++.+++.|++.+.+++++|.|+|+.+||.
T Consensus 53 ~~---~~~~i~l~gH~DtVp~~~~~~~pf~~~~~g~l~g~G~---~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~ 126 (363)
T TIGR01891 53 GK---PGPVVALRADMDALPIQEQTDLPYKSTNPGVMHACGH---DLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEG 126 (363)
T ss_pred CC---CCCEEEEEeccCCCCcccccCCCcccCCCCceecCcC---HHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcC
Confidence 42 23679999999999831 232 36789999999999887667788999999999998
Q ss_pred CccchHHHHhhcCccCceeEEEEeccCC
Q 007484 201 FMLGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 201 gl~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
+ .|++.++++. +.++++.+++.|...
T Consensus 127 ~-~G~~~~~~~~-~~~~~d~~i~~e~~~ 152 (363)
T TIGR01891 127 G-GGATKMIEDG-VLDDVDAILGLHPDP 152 (363)
T ss_pred c-chHHHHHHCC-CCCCcCEEEEECCCC
Confidence 6 7999988754 345677888888643
No 70
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=98.86 E-value=4.1e-08 Score=106.58 Aligned_cols=134 Identities=22% Similarity=0.218 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCcee-EEEEeeeecCccccccccccccccccccceEE
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFR-IEIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~-vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi 132 (602)
+++.+.+++|. ++.. .|..+.++.+||.++++++| ++ ++++ ...|++
T Consensus 13 ~~~~~~l~~Lv-~ips---~s~~e~~~~~~l~~~l~~~g------~~~~~~~----------------------~~~~v~ 60 (395)
T TIGR03526 13 GDMIRFLRDLV-AIPS---ESGDEGRVALRIKQEMEKLG------FDKVEID----------------------PMGNVL 60 (395)
T ss_pred HHHHHHHHHHh-cCCC---CCCchHHHHHHHHHHHHHcC------CceEEEc----------------------CCCcEE
Confidence 35666777776 3332 33445588999999999998 33 2221 113889
Q ss_pred EEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEE
Q 007484 133 MRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPII 191 (602)
Q Consensus 133 ~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~ 191 (602)
+++ |.+ ++.|++.+|+|+||. ++|+.|+++|++++|.+++.+.+.+.+++.++.
T Consensus 61 ~~~-g~~----~~~l~l~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~ 135 (395)
T TIGR03526 61 GYI-GHG----PKLIAMDAHIDTVGIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLL 135 (395)
T ss_pred EEe-CCC----CCEEEEEeeccccCCCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEE
Confidence 988 421 257999999999984 479999999999999999999988777778999
Q ss_pred EEEeCcccC-CccchHHHHhhcCccCceeEEEEecc
Q 007484 192 FLFNGAEEL-FMLGAHGFMKAHKWRDSVGAVINVEA 226 (602)
Q Consensus 192 flf~~aEE~-gl~GS~~f~~~h~~~~~i~a~INLD~ 226 (602)
|++..+||. +..|++.++++... +..++|..|.
T Consensus 136 ~~~~~dEE~~~g~~~~~~~~~~~~--~~d~~i~~ep 169 (395)
T TIGR03526 136 VTGTVQEEDCDGLCWQYIIEEDKI--KPEFVVITEP 169 (395)
T ss_pred EEEecccccCCcHhHHHHHhccCC--CCCEEEecCC
Confidence 999999993 44566666654332 3456666664
No 71
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=98.86 E-value=3.4e-08 Score=107.12 Aligned_cols=134 Identities=22% Similarity=0.210 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCcee-EEEEeeeecCccccccccccccccccccceEE
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFR-IEIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~-vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi 132 (602)
+++.+.+++|. ++.+ .|..++++.+||.++++++| ++ ++++ ...|++
T Consensus 13 ~~~~~~~~~lv-~i~s---~s~~e~~~~~~l~~~l~~~G------~~~~~~~----------------------~~~n~~ 60 (395)
T TIGR03320 13 GDMIRFLRDLV-AIPS---ESGDEKRVAERIKEEMEKLG------FDKVEID----------------------PMGNVL 60 (395)
T ss_pred HHHHHHHHHHH-cCCC---CCCchHHHHHHHHHHHHHhC------CcEEEEC----------------------CCCCEE
Confidence 55677777777 3333 23345589999999999998 33 2221 113889
Q ss_pred EEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEE
Q 007484 133 MRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPII 191 (602)
Q Consensus 133 ~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~ 191 (602)
+++ |. +++.|++.+|+|+||. ++|+.|+++|++++|.+++.+++.+.+++.++.
T Consensus 61 ~~~-g~----~~~~l~l~~H~DtVp~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~ 135 (395)
T TIGR03320 61 GYI-GH----GPKLIAMDAHIDTVGIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLL 135 (395)
T ss_pred EEe-CC----CCcEEEEEecccccCCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEE
Confidence 887 42 2357999999999974 479999999999999999999988777788999
Q ss_pred EEEeCcccCCc-cchHHHHhhcCccCceeEEEEecc
Q 007484 192 FLFNGAEELFM-LGAHGFMKAHKWRDSVGAVINVEA 226 (602)
Q Consensus 192 flf~~aEE~gl-~GS~~f~~~h~~~~~i~a~INLD~ 226 (602)
|.+..+||.+. .|++.++.+.. .+..++|..|.
T Consensus 136 ~~~~~dEE~~~g~~~~~~~~~~~--~~~d~~iv~ep 169 (395)
T TIGR03320 136 VTGTVQEEDCDGLCWQYIIEEDG--IKPEFVVITEP 169 (395)
T ss_pred EEecccccccCchHHHHHHHhcC--CCCCEEEEcCC
Confidence 99999999642 34455555432 23556666664
No 72
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=98.86 E-value=1.6e-07 Score=100.48 Aligned_cols=146 Identities=23% Similarity=0.162 Sum_probs=92.5
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccCCCC-----------
Q 007484 162 AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTG----------- 230 (602)
Q Consensus 162 A~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G~g----------- 230 (602)
|-||..||++++|++|.+++. +++.++.++|+.-||.|+.||+.-..+. +...+|.+|..-.+
T Consensus 176 alDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~i----~pD~aI~vDv~~~~d~~~~~~~~lg 249 (350)
T TIGR03107 176 AWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTKF----NPDIFFAVDCSPAGDIYGDQGGKLG 249 (350)
T ss_pred ccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhhC----CCCEEEEEecCCcCCCCCCCccccC
Confidence 889999999999999999864 5778999999999999999999765532 23477888865332
Q ss_pred -CCceEE-ecCCC--CChhhhhh---hhhcccccccccccccCCCCCCCchH--HHhhcCCCCcEEEEEeecCCCcCCCc
Q 007484 231 -GLDLVC-QSGPS--SWPSSVYA---QSAIYPMAHSAAQDVFPVIPGDTDYR--IFSQDYGDIPGLDIIFLIGGYYYHTS 301 (602)
Q Consensus 231 -g~~~lf-q~gp~--~~~~~~y~---~~~~~p~~~~~~~e~f~~ips~tD~~--~F~~~~~GIPgld~a~~~~~~~YHT~ 301 (602)
|+.+.+ ..++. +.+.+... +...-|+-. ....++||-. .+.+ .|+|.+.+.- .. .+-||+
T Consensus 250 ~Gp~i~~~D~~~i~~~~l~~~l~~~A~~~~I~~Q~-------~~~~gGtDa~~~~~~~--~Gvpt~~i~i-p~-Ry~Hs~ 318 (350)
T TIGR03107 250 EGTLLRFFDPGHIMLPRMKDFLLTTAEEAGIKYQY-------YVAKGGTDAGAAHLKN--SGVPSTTIGV-CA-RYIHSH 318 (350)
T ss_pred CCceEEEecCCCCCCHHHHHHHHHHHHHcCCCcEE-------ecCCCCchHHHHHHhC--CCCcEEEEcc-Cc-ccccCh
Confidence 222211 11221 11111111 111112211 0112367766 5543 6999988753 22 256887
Q ss_pred ccccCCCCHHHHHHHHHHHHHHHHHH
Q 007484 302 HDTVDRLLPGSVQARGDNLFNVLKAF 327 (602)
Q Consensus 302 ~Dt~d~id~~~lq~~g~~~l~l~~~l 327 (602)
.. .++.+.++++.+.+.++++.+
T Consensus 319 ~e---~i~~~D~~~~~~Ll~~~i~~l 341 (350)
T TIGR03107 319 QT---LYSIDDFLAAQAFLQAIVKKL 341 (350)
T ss_pred hh---eeeHHHHHHHHHHHHHHHHhc
Confidence 65 456888888888888888765
No 73
>PRK09961 exoaminopeptidase; Provisional
Probab=98.86 E-value=1.5e-07 Score=100.63 Aligned_cols=153 Identities=14% Similarity=0.047 Sum_probs=92.8
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccCCCCCCce------
Q 007484 161 GAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGGLDL------ 234 (602)
Q Consensus 161 GA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G~gg~~~------ 234 (602)
.+-||..||++++|++|.+++. +++.+++|+|+..||.|+.|++...... +....|.+|.+-.++..-
T Consensus 163 kalDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~rGa~~aa~~i----~pd~~I~vDv~~~~d~~~~~~~~~ 236 (344)
T PRK09961 163 KAFDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLRGGQTATRAV----SPDVAIVLDTACWAKNFDYGAANH 236 (344)
T ss_pred eechhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccchHHHHHHHhcc----CCCEEEEEeccCCCCCCCCCCCcc
Confidence 4889999999999999999764 4679999999999999999999877532 335688888664322100
Q ss_pred -EEecCCCCChhhhhhh-hhcccc----cccccccc---c--CCC-CCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcc
Q 007484 235 -VCQSGPSSWPSSVYAQ-SAIYPM----AHSAAQDV---F--PVI-PGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSH 302 (602)
Q Consensus 235 -lfq~gp~~~~~~~y~~-~~~~p~----~~~~~~e~---f--~~i-ps~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~ 302 (602)
..-.|| . ++.+.+ ...+|. ....+++. + ... ..+||-..|.....|+|.+.+..- .. +=||+.
T Consensus 237 ~~lg~Gp--~-i~~~D~~~i~~~~l~~~l~~~A~~~~Ip~Q~~~~~ggGTDa~~~~~~~~Giptv~ig~p-~r-y~Hs~~ 311 (344)
T PRK09961 237 RQIGNGP--M-LVLSDKSLIAPPKLTAWIETVAAEIGIPLQADMFSNGGTDGGAVHLTGTGVPTVVMGPA-TR-HGHCAA 311 (344)
T ss_pred cccCCCc--e-EEEccCCcCCCHHHHHHHHHHHHHcCCCcEEEecCCCcchHHHHHHhCCCCCEEEechh-hh-cccChh
Confidence 001121 1 111110 001110 00111111 0 111 246898876432268999987543 22 347765
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHHH
Q 007484 303 DTVDRLLPGSVQARGDNLFNVLKAF 327 (602)
Q Consensus 303 Dt~d~id~~~lq~~g~~~l~l~~~l 327 (602)
+.++.+.+.++.+.+.++++.+
T Consensus 312 ---E~v~~~D~~~~~~Ll~~~i~~l 333 (344)
T PRK09961 312 ---SIADCRDILQMIQLLSALIQRL 333 (344)
T ss_pred ---heEEHHHHHHHHHHHHHHHHHc
Confidence 4556778888888777777554
No 74
>PRK08737 acetylornithine deacetylase; Provisional
Probab=98.85 E-value=2.7e-08 Score=107.06 Aligned_cols=132 Identities=22% Similarity=0.279 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHhcCCCC-CCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceE
Q 007484 53 EARAIQHVRVLADEIGDRQ-EGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNI 131 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~-~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NV 131 (602)
.+++.+.+++|. +|.+.. .++.+++++.+|+.++++ | +++++++. + .+..|+
T Consensus 5 ~~~~~~~l~~Lv-~i~s~~~~~~~~e~~~~~~l~~~l~--g------~~~~~~~~---~---------------~~~~nl 57 (364)
T PRK08737 5 LESTLDHLQALV-SFDTRNPPRAITTGGIFDYLRAQLP--G------FQVEVIDH---G---------------AGAVSL 57 (364)
T ss_pred HHHHHHHHHHHh-CCCCcCCCCCCCcHHHHHHHHHHhC--C------CEEEEecC---C---------------CCceEE
Confidence 456889999998 666542 222234688999999996 4 44554431 1 123588
Q ss_pred EEEEeCCCCCCCCCEEEEeeecCCCCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 007484 132 VMRISSTDSQDTDPSVLMNGHFDGPLS-------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (602)
Q Consensus 132 i~~i~g~~~~~~~~~vll~aH~Dsv~~-------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~f 192 (602)
+++. |+ +.|++++|+|+||. ++|+.|+++|+|+++.+++. ++.+|.|
T Consensus 58 i~~~-g~------~~lll~gH~DtVp~~~~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v~~ 123 (364)
T PRK08737 58 YAVR-GT------PKYLFNVHLDTVPDSPHWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDAAF 123 (364)
T ss_pred EEEc-CC------CeEEEEeeeCCCCCCCCCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCEEE
Confidence 8863 32 35999999999984 35999999999999999873 3468999
Q ss_pred EEeCcccCCc-cchHHHHhhcCccCceeEEEEeccCC
Q 007484 193 LFNGAEELFM-LGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 193 lf~~aEE~gl-~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
+|+.+||.|. .|++.++++.. +..++|..|..+
T Consensus 124 ~~~~dEE~g~~~g~~~~~~~~~---~~~~~iv~Ept~ 157 (364)
T PRK08737 124 LFSSDEEANDPRCVAAFLARGI---PYEAVLVAEPTM 157 (364)
T ss_pred EEEcccccCchhhHHHHHHhCC---CCCEEEEcCCCC
Confidence 9999999987 68888887542 346777766543
No 75
>PRK09864 putative peptidase; Provisional
Probab=98.77 E-value=4.4e-07 Score=97.12 Aligned_cols=146 Identities=17% Similarity=0.123 Sum_probs=90.2
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccCCCCC----------
Q 007484 162 AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGG---------- 231 (602)
Q Consensus 162 A~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G~gg---------- 231 (602)
|-||..||++++|++|.+++ ++.+++|+|+.-||.|+.|++.-..+. +....|.+|..-+++
T Consensus 173 alDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvGlrGA~~aa~~i----~PDiaIavDvt~~~d~p~~~~~~~~ 244 (356)
T PRK09864 173 ALDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVGLRGAQTSAEHI----KPDVVIVLDTAVAGDVPGIDNIKYP 244 (356)
T ss_pred eCccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcchHHHHHHHhcC----CCCEEEEEecccCCCCCCCcccccc
Confidence 88999999999999999964 778999999999999999999877643 224577788653221
Q ss_pred ------Cce-EEecCCC--CChhhhhh---hhhcccccccccccccCCCC-CCCchHHHhhcCCCCcEEEEEeecCCCcC
Q 007484 232 ------LDL-VCQSGPS--SWPSSVYA---QSAIYPMAHSAAQDVFPVIP-GDTDYRIFSQDYGDIPGLDIIFLIGGYYY 298 (602)
Q Consensus 232 ------~~~-lfq~gp~--~~~~~~y~---~~~~~p~~~~~~~e~f~~ip-s~tD~~~F~~~~~GIPgld~a~~~~~~~Y 298 (602)
+.+ .+..++. +.+.+... +...-|+-. + ..+ ++||-..+.....|+|...++. ..+ +-
T Consensus 245 ~~lG~Gp~i~~~D~~~i~~~~l~~~l~~~A~~~~Ip~Q~----~---~~~~ggTDa~~i~~~~~Gvpt~~isi-P~R-Y~ 315 (356)
T PRK09864 245 LKLGQGPGLMLFDKRYFPNQKLVAALKSCAAHNDLPLQF----S---TMKTGATDGGRYNVMGGGRPVVALCL-PTR-YL 315 (356)
T ss_pred cccCCCCeEEEccCCccCCHHHHHHHHHHHHHcCCCceE----E---EcCCCCchHHHHHHhCCCCcEEEEee-ccC-cC
Confidence 111 1111111 11111111 111112211 1 112 3677665533236999987753 233 57
Q ss_pred CCcccccCCCCHHHHHHHHHHHHHHHHHH
Q 007484 299 HTSHDTVDRLLPGSVQARGDNLFNVLKAF 327 (602)
Q Consensus 299 HT~~Dt~d~id~~~lq~~g~~~l~l~~~l 327 (602)
||+.-. ++.+.++++.+.+.++++.+
T Consensus 316 Hs~~e~---~~~~D~e~~~~Ll~~~~~~l 341 (356)
T PRK09864 316 HANSGM---ISKADYDALLTLIRDFLTTL 341 (356)
T ss_pred CCcceE---eEHHHHHHHHHHHHHHHHhc
Confidence 888655 45777888888777777665
No 76
>PLN02693 IAA-amino acid hydrolase
Probab=98.72 E-value=1.9e-07 Score=103.11 Aligned_cols=123 Identities=20% Similarity=0.231 Sum_probs=93.3
Q ss_pred HHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEEeC
Q 007484 58 QHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISS 137 (602)
Q Consensus 58 ~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g 137 (602)
+.+.++.+++...+.-|-++.++.+||.++|+++| ++++... ..+|+++++.+
T Consensus 47 ~~~~~~r~~lh~~PE~s~~E~~ta~~i~~~L~~~G------~~~~~~~---------------------~~~~via~~g~ 99 (437)
T PLN02693 47 DWMVRIRRKIHENPELGYEEFETSKLIRSELDLIG------IKYRYPV---------------------AITGIIGYIGT 99 (437)
T ss_pred HHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHCC------CeeEecC---------------------CCcEEEEEECC
Confidence 33455555566666677777799999999999998 4443210 12599999842
Q ss_pred CCCCCCCCEEEEeeecCCCCCC-----------CC---CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCcc
Q 007484 138 TDSQDTDPSVLMNGHFDGPLSS-----------PG---AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFML 203 (602)
Q Consensus 138 ~~~~~~~~~vll~aH~Dsv~~~-----------pG---A~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~ 203 (602)
+ +.+.|++.+|+|++|.. +| +.|.++++|+++.+++.|++.+.+.+.+|+|+|..+|| +..
T Consensus 100 -~---~g~~i~l~~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE-~~~ 174 (437)
T PLN02693 100 -G---EPPFVALRADMDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEE-GLS 174 (437)
T ss_pred -C---CCCEEEEEeecCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEccc-chh
Confidence 1 23679999999999842 12 77888999999999999988765667899999999999 557
Q ss_pred chHHHHhhc
Q 007484 204 GAHGFMKAH 212 (602)
Q Consensus 204 GS~~f~~~h 212 (602)
|++.++++.
T Consensus 175 Ga~~~i~~g 183 (437)
T PLN02693 175 GAKKMREEG 183 (437)
T ss_pred hHHHHHHCC
Confidence 999998754
No 77
>PLN02280 IAA-amino acid hydrolase
Probab=98.68 E-value=3.7e-07 Score=101.80 Aligned_cols=135 Identities=19% Similarity=0.218 Sum_probs=95.0
Q ss_pred HHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEE
Q 007484 56 AIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRI 135 (602)
Q Consensus 56 a~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i 135 (602)
..+.+++|.+.+...+.-+.++.++.+||.++|++.| ++++... ..+|+++++
T Consensus 95 ~~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G------~~~~~~~---------------------~~~~vva~~ 147 (478)
T PLN02280 95 TVAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMG------IMYRYPL---------------------AKTGIRAWI 147 (478)
T ss_pred HHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCC------CeEEecC---------------------CCCEEEEEE
Confidence 3455555555444444445566699999999999998 4444311 125999998
Q ss_pred eCCCCCCCCCEEEEeeecCCCCCCC-----------C---CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCC
Q 007484 136 SSTDSQDTDPSVLMNGHFDGPLSSP-----------G---AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELF 201 (602)
Q Consensus 136 ~g~~~~~~~~~vll~aH~Dsv~~~p-----------G---A~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~g 201 (602)
|++ +++.|++.+|+|++|... | +.|..+++|+++.+++.|++.+.+++.+|+|+|..+||.|
T Consensus 148 -g~~---~~~~I~l~gh~DaVP~~e~~~w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g 223 (478)
T PLN02280 148 -GTG---GPPFVAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAG 223 (478)
T ss_pred -CCC---CCCEEEEEEecCCCcccCCCCCCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEeccccccc
Confidence 532 236799999999998421 1 2334559999999999998776677889999999999997
Q ss_pred ccchHHHHhhcCccCceeEEEE
Q 007484 202 MLGAHGFMKAHKWRDSVGAVIN 223 (602)
Q Consensus 202 l~GS~~f~~~h~~~~~i~a~IN 223 (602)
. |++.++++. ..+++++++-
T Consensus 224 ~-Ga~~li~~g-~~~~~d~~~~ 243 (478)
T PLN02280 224 N-GAKRMIGDG-ALDDVEAIFA 243 (478)
T ss_pred c-hHHHHHHCC-CCcCCCEEEE
Confidence 4 999998753 2233444444
No 78
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=98.66 E-value=1.7e-07 Score=99.80 Aligned_cols=158 Identities=20% Similarity=0.158 Sum_probs=119.2
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccc-cCCCceeEEEEeeeecCcccccccccccccccccc
Q 007484 50 RFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKE-RAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNH 128 (602)
Q Consensus 50 ~Fs~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~-~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~ 128 (602)
+.+.||+++..-+|.+- +-..||+|+..-.++|...|.++-. +.+++ ..|.+ ++.+..-..
T Consensus 4 ~is~e~v~~lt~~LV~~--~SvtgT~GE~a~ad~l~~vL~~~pYFqehpe-----------d~~~~-----pi~nDpygR 65 (553)
T COG4187 4 RISSERVRALTLSLVSW--PSVTGTPGEGAFADRLLGVLGELPYFQEHPE-----------DLWLQ-----PIHNDPYGR 65 (553)
T ss_pred hhhHHHHHHHHHHHeec--cccCCCcccccHHHHHHHHHhcCchhhhChH-----------hhccc-----CCCCCcccc
Confidence 34678999999999843 5578999999999999999998762 11111 11211 222222355
Q ss_pred ceEEEEEeCCCCCCCCCEEEEeeecCCCCC------------------------------------------CCCCCCCh
Q 007484 129 TNIVMRISSTDSQDTDPSVLMNGHFDGPLS------------------------------------------SPGAGDCG 166 (602)
Q Consensus 129 ~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~------------------------------------------~pGA~D~~ 166 (602)
.||.+-++|. ++++.|++.+|+|+|.. +.|+.|++
T Consensus 66 ~nv~AlVrg~---~~k~tvvl~gH~DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMK 142 (553)
T COG4187 66 RNVFALVRGG---TSKRTVVLHGHFDTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMK 142 (553)
T ss_pred ceeEEEEecC---CCCceEEEeeccceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhh
Confidence 7999999994 35678999999999864 57999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcC-----ccCceeEEEEeccCCC
Q 007484 167 SCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHK-----WRDSVGAVINVEASGT 229 (602)
Q Consensus 167 sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~-----~~~~i~a~INLD~~G~ 229 (602)
+|.|+-|.++..+.+. ...+.++.|+.+.+||....|.+.-+.+.+ ..-...+.||+|..+.
T Consensus 143 sGlav~la~L~~fa~~-~~~~GNlLf~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~ 209 (553)
T COG4187 143 SGLAVHLACLEEFAAR-TDRQGNLLFMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSD 209 (553)
T ss_pred hhhHHHHHHHHHHhhC-CCCCCcEEEEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccC
Confidence 9999999999999875 456789999999999988877776654331 2356789999998754
No 79
>COG4310 Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain [General function prediction only]
Probab=98.50 E-value=1.3e-06 Score=89.36 Aligned_cols=195 Identities=17% Similarity=0.163 Sum_probs=134.7
Q ss_pred ceeEEEEeeeecCccccccccccccccccccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHH
Q 007484 98 KFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELAR 177 (602)
Q Consensus 98 ~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar 177 (602)
+++|.+|....+|+... .+ .-.+|+ .+..|++++|..+.. =|+||-||+|.+.-+++
T Consensus 152 dyeVvIDae~~dG~L~y-----------ge-----fi~rg~----~~~eiLlst~lCHPS---maNdn~SG~all~~lak 208 (435)
T COG4310 152 DYEVVIDAEHEDGSLDY-----------GE-----FIHRGT----SKDEILLSTYLCHPS---MANDNLSGLALLTFLAK 208 (435)
T ss_pred CeEEEEecccccCceeh-----------hh-----eeccCC----ccceeeeeecccChh---hccCccchHHHHHHHHH
Confidence 48888888777774221 11 123554 244599999999944 68999999999999999
Q ss_pred HHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCc-cCceeEEEEeccCCCCCCceEEecCCCCChhhhhhhhh-ccc
Q 007484 178 LTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKW-RDSVGAVINVEASGTGGLDLVCQSGPSSWPSSVYAQSA-IYP 255 (602)
Q Consensus 178 ~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~-~~~i~a~INLD~~G~gg~~~lfq~gp~~~~~~~y~~~~-~~p 255 (602)
.|+.. +.+.+-+|+|-. +-.||-.|..+|.. .++++.-+.+-+.|.+|..-..++..+.-.++-....+ .|-
T Consensus 209 ~l~~~--ktrysYRfvf~P----~TiGsi~wLsrnee~lkhvk~GlVlsClGD~g~~nykrtrrgna~iDki~~~tl~~~ 282 (435)
T COG4310 209 ALKSL--KTRYSYRFVFAP----ETIGSIVWLSRNEECLKHVKHGLVLSCLGDGGGPNYKRTRRGNALIDKIALHTLKHC 282 (435)
T ss_pred HHHhc--cceeeEEEEecc----cccchhhhHhcchhHHhhhhcceEEEEecCCCCccceeccccchHHHHHHHHHHhcC
Confidence 99864 577899999976 46899999998843 47999999999999877544444332222222111111 111
Q ss_pred ccccccccccCCCCCCCchHHHhhcCCCCcEEEEEe-------ecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHHHHh
Q 007484 256 MAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIF-------LIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFS 328 (602)
Q Consensus 256 ~~~~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~-------~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la 328 (602)
++ .-+++...|.++|-|+|.. ||+++-- +..-.-|||+.|+.+.|+++.+..--..+++++..+.
T Consensus 283 -~s--~~~~~dF~p~G~DERQf~s-----Pg~NLpvg~~~Rs~yG~f~~YHtSaDnL~fi~~e~L~~s~~~~memI~~lE 354 (435)
T COG4310 283 -GS--NFKAADFLPYGSDERQFCS-----PGFNLPVGGLQRSRYGDFDGYHTSADNLDFISPEGLAGSFQMMMEMILNLE 354 (435)
T ss_pred -Cc--CceeeecccCCCchhhccC-----CCcCCchhhhhHhhcCCCccccCccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 11 1123466888999999964 5554321 1222379999999999999998888888888888875
Q ss_pred C
Q 007484 329 N 329 (602)
Q Consensus 329 ~ 329 (602)
+
T Consensus 355 ~ 355 (435)
T COG4310 355 I 355 (435)
T ss_pred h
Confidence 4
No 80
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=98.38 E-value=2.7e-06 Score=90.12 Aligned_cols=140 Identities=20% Similarity=0.300 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCh----hHHHHHHHHHHHHhcccccCCCceeEEEEee-eecCccccccccccccccccc
Q 007484 53 EARAIQHVRVLADEIGDRQEGRP----GLREAAVYIKTQLEGIKERAGPKFRIEIEEN-VVNGSFNMIFLGHSISLGYRN 127 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~~gS~----~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~-~~~G~~~~~~~~~~~~~~y~~ 127 (602)
.++..+.|++.. .|.+ +..-+ .-.+.++|++++++++|.... -..+-.| ..+|. +..
T Consensus 15 ~de~~~~L~e~v-~iqs-vs~dp~~r~~v~rm~~~~~~~l~~lG~~~~---l~dlg~q~~~~g~-------------~v~ 76 (473)
T KOG2276|consen 15 KDEFINTLREAV-AIQS-VSADPTKRLEVRRMADWLRDYLTKLGAPLE---LVDLGYQSLPDGQ-------------IVP 76 (473)
T ss_pred HHHHHHHHHHHh-cccc-cccCccccHHHHHHHHHHHHHHHHhCCcee---eeecccCCCCCCc-------------ccc
Confidence 345667777776 4554 22222 233889999999999993221 1111111 11111 111
Q ss_pred cceEEEEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCC
Q 007484 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIP 186 (602)
Q Consensus 128 ~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p 186 (602)
..-++-..-|+++ +++.+++..|+|.+|. ++|+.||+.-++.-+++++++.+.|...
T Consensus 77 lPpvvl~~~Gsdp--~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~l 154 (473)
T KOG2276|consen 77 LPPVVLGVLGSDP--SKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGIDL 154 (473)
T ss_pred cChhhhhcccCCC--CcceEEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCccc
Confidence 1222222236543 5678999999999885 5799999999999999999999999999
Q ss_pred CCCEEEEEeCcccCCccchHHHHhhc
Q 007484 187 PRPIIFLFNGAEELFMLGAHGFMKAH 212 (602)
Q Consensus 187 ~~~I~flf~~aEE~gl~GS~~f~~~h 212 (602)
+.+|+|+|-+-||+|..|-...++..
T Consensus 155 pvnv~f~~EgmEEsgS~~L~~l~~~~ 180 (473)
T KOG2276|consen 155 PVNVVFVFEGMEESGSEGLDELIEKE 180 (473)
T ss_pred cceEEEEEEechhccCccHHHHHHHH
Confidence 99999999999999999998887644
No 81
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=98.00 E-value=2e-05 Score=82.50 Aligned_cols=131 Identities=23% Similarity=0.198 Sum_probs=78.6
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccCC------CC-----
Q 007484 162 AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG------TG----- 230 (602)
Q Consensus 162 A~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G------~g----- 230 (602)
+-||..||++++|++|.+++. +.+.++.|+|+..||.|+.|++....+. +....|.+|..- ..
T Consensus 132 alDdR~g~~~lle~l~~l~~~--~~~~~v~~v~tvqEEvG~rGA~~aa~~i----~PD~ai~vD~~~a~d~~~~~~~~~~ 205 (292)
T PF05343_consen 132 ALDDRAGCAVLLELLRELKEK--ELDVDVYFVFTVQEEVGLRGAKTAAFRI----KPDIAIAVDVTPAGDTPGSDEKEQG 205 (292)
T ss_dssp THHHHHHHHHHHHHHHHHTTS--S-SSEEEEEEESSCTTTSHHHHHHHHHH-----CSEEEEEEEEEESSSTTSTTTTSC
T ss_pred eCCchhHHHHHHHHHHHHhhc--CCCceEEEEEEeeeeecCcceeeccccc----CCCEEEEEeeeccCCCCCCchhhcc
Confidence 679999999999999999875 3459999999999999999999877642 334566666532 21
Q ss_pred ---CCceE-EecCCC--CChhhhhh---hhhcccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCc
Q 007484 231 ---GLDLV-CQSGPS--SWPSSVYA---QSAIYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTS 301 (602)
Q Consensus 231 ---g~~~l-fq~gp~--~~~~~~y~---~~~~~p~~~~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~ 301 (602)
|+.+. ...++. +.+.+... +...-|+... .+ ...+||-..+...-.|+|+..+..-- .+.||+
T Consensus 206 lG~Gp~i~~~D~~~i~~~~l~~~l~~~A~~~~Ip~Q~~----~~--~~ggTDa~~~~~~~~Gi~t~~i~iP~--ry~Hs~ 277 (292)
T PF05343_consen 206 LGKGPVIRVGDSSMIPNPKLVDKLREIAEENGIPYQRE----VF--SGGGTDAGAIQLSGGGIPTAVISIPC--RYMHSP 277 (292)
T ss_dssp TTS-EEEEEEETTEESHHHHHHHHHHHHHHTT--EEEE----EE--SSSSSTHHHHHTSTTSSEEEEEEEEE--BSTTST
T ss_pred CCCCcEEEEccCCCCCCHHHHHHHHHHHHHcCCCeEEE----ec--CCcccHHHHHHHcCCCCCEEEEeccc--ccCCCc
Confidence 11121 111111 11111111 1111232211 11 23478888875434699998875422 368998
Q ss_pred ccccC
Q 007484 302 HDTVD 306 (602)
Q Consensus 302 ~Dt~d 306 (602)
..+.+
T Consensus 278 ~e~~~ 282 (292)
T PF05343_consen 278 VEVID 282 (292)
T ss_dssp TEEEE
T ss_pred ceEEE
Confidence 77665
No 82
>KOG2657 consensus Transmembrane glycoprotein nicastrin [Signal transduction mechanisms; Posttranslational modification, protein turnover, chaperones]
Probab=97.90 E-value=6.8e-05 Score=81.62 Aligned_cols=187 Identities=16% Similarity=0.124 Sum_probs=119.1
Q ss_pred cccceEEEEEeCCC---CCCC-CCEEEEeeecCCCC----CCCCCCCChhHHHHHHHHHHHHHhcC--CCCCCCEEEEEe
Q 007484 126 RNHTNIVMRISSTD---SQDT-DPSVLMNGHFDGPL----SSPGAGDCGSCVASMLELARLTIDSG--WIPPRPIIFLFN 195 (602)
Q Consensus 126 ~~~~NVi~~i~g~~---~~~~-~~~vll~aH~Dsv~----~~pGA~D~~sGva~~LE~ar~L~~~~--~~p~~~I~flf~ 195 (602)
...+||..-+++-. ..++ +++++..+-+|+.. .++||..--++....|.++|.|++.+ ...+|++.|+|+
T Consensus 155 l~~ynvws~l~pi~ts~tnk~~~~vvv~tarmdsrsfF~n~s~Ga~S~~~slv~~laaa~al~r~pai~nl~rnV~f~~f 234 (596)
T KOG2657|consen 155 LHSYNVWSFLTPIPTSPTNKTISKVVVVTARMDSRSFFPNISVGAVSVLTSLVSVLAAARALKRQPAINNLNRNVFFAFF 234 (596)
T ss_pred cCCccceeccCccccccccCcCcceeeeeeecccccccccccCCccccchhHHHHHHHHHHhccCcccccccceeEEEEe
Confidence 45678887776532 1122 67899999999864 37888888999999999999997653 357899999999
Q ss_pred CcccCCccchHHHHhhc---C--cc-Cc---eeEEEEeccCCCC-CCceEEecCCCC------Ch---hhhhhhhh-ccc
Q 007484 196 GAEELFMLGAHGFMKAH---K--WR-DS---VGAVINVEASGTG-GLDLVCQSGPSS------WP---SSVYAQSA-IYP 255 (602)
Q Consensus 196 ~aEE~gl~GS~~f~~~h---~--~~-~~---i~a~INLD~~G~g-g~~~lfq~gp~~------~~---~~~y~~~~-~~p 255 (602)
.+|-.+.+||.+++-|. + .+ ++ ++.++.+-.+|-+ ++.+..-.++.. .. .+.+.|+- .|+
T Consensus 235 ~get~~ylgS~r~~yeme~gk~pva~~s~~~iD~~LEiGqvg~~~s~kl~~~~d~~~~~sv~nqtld~L~~~ekSlrs~~ 314 (596)
T KOG2657|consen 235 NGETLDYLGSGRAAYEMENGKFPVAIRSDNEIDYILEIGQVGVAKSRKLYVHVDGERYQSVKNQTLDVLDRIEKSLRSHA 314 (596)
T ss_pred ecceeeeccchhhhhHhhcCCCCeeeccCccchheeeecccccccCceEEEEeccchhhhHHHHHHHHHHHHHhcccccC
Confidence 99999999999877544 2 11 33 7777777777642 233322223221 11 11222221 133
Q ss_pred ccccccccccCCCCCCCchHHHhhcCCCCcEEEEEeecCC---CcCCCcccccCCCCHHHH
Q 007484 256 MAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGG---YYYHTSHDTVDRLLPGSV 313 (602)
Q Consensus 256 ~~~~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~~---~~YHT~~Dt~d~id~~~l 313 (602)
+.-....+.-..+|..|= ..|.|.-.++.++-++..... .+||+.+|+.|+++...-
T Consensus 315 f~ll~~s~~s~~lPPsSl-qsFlR~dpn~saVvLad~~~~f~NKyYhSilDdaeNin~sy~ 374 (596)
T KOG2657|consen 315 FDLLKPSGSSDRLPPSSL-QSFLRADPNVSAVVLADYGKEFENKYYHSILDDAENINDSYE 374 (596)
T ss_pred eeeecCCCCCCCCChHHH-HHHHhhCCCcceEEeccCCchhhhhhhhhhhcchhhccchhh
Confidence 321111111233454443 346653378999988766532 389999999999976543
No 83
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=96.80 E-value=0.026 Score=61.53 Aligned_cols=139 Identities=21% Similarity=0.267 Sum_probs=99.2
Q ss_pred HHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEE
Q 007484 56 AIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRI 135 (602)
Q Consensus 56 a~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i 135 (602)
..+.+.++.+.+.-++-=+-++.++.+||.+.|++.| ++ .++. .. ..+-+++.+
T Consensus 10 ~~~~l~~~rr~lH~~PEL~f~E~~Ta~~i~~~L~~~g------~~-~~~~--~~-----------------~~TGvva~~ 63 (392)
T COG1473 10 LKDELIEWRRDLHEHPELGFEEYRTAAYIAEKLEELG------FE-VVEV--GG-----------------GKTGVVATL 63 (392)
T ss_pred hhHHHHHHHHHHhhCCccchhHHHHHHHHHHHHHHcC------Ce-eEec--cC-----------------CceEEEEEE
Confidence 3445556666666676667777799999999999999 33 1111 10 125789999
Q ss_pred eCCCCCCCCCEEEEeeecCCCCC-----------CCC----CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccC
Q 007484 136 SSTDSQDTDPSVLMNGHFDGPLS-----------SPG----AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEEL 200 (602)
Q Consensus 136 ~g~~~~~~~~~vll~aH~Dsv~~-----------~pG----A~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~ 200 (602)
+|.+ +.+.|.+-+-||..|. .+| .+=| .=++++|-+++.|++....++.+|+|+|-.+||.
T Consensus 64 ~~g~---~g~tIalRAD~DALPi~E~t~~~~~S~~~G~mHACGHD-~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~ 139 (392)
T COG1473 64 KGGK---PGPTIALRADMDALPIQEETGLPFASKNPGVMHACGHD-GHTAILLGAALALAEHKDNLPGTVRLIFQPAEEG 139 (392)
T ss_pred cCCC---CCCEEEEEeecccCccccccCCCcccCCCCCcccCCch-HHHHHHHHHHHHHHhhhhhCCcEEEEEecccccc
Confidence 8754 3358999999999984 233 1222 3467889999999887567899999999999998
Q ss_pred CccchHHHHhhcCccCc-eeEEEEecc
Q 007484 201 FMLGAHGFMKAHKWRDS-VGAVINVEA 226 (602)
Q Consensus 201 gl~GS~~f~~~h~~~~~-i~a~INLD~ 226 (602)
+- |+..++++-.. ++ +++++-+-.
T Consensus 140 ~~-Ga~~mi~~G~~-~~~vD~v~g~H~ 164 (392)
T COG1473 140 GG-GAKAMIEDGVF-DDFVDAVFGLHP 164 (392)
T ss_pred cc-cHHHHHhcCCc-cccccEEEEecC
Confidence 87 99999985433 34 777666654
No 84
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=95.96 E-value=0.02 Score=62.73 Aligned_cols=149 Identities=16% Similarity=0.070 Sum_probs=92.5
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceE
Q 007484 52 SEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNI 131 (602)
Q Consensus 52 s~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NV 131 (602)
..+|.++...+++ .|. .-|..+++...|+.++.+..+.. ++ |+-..=+ + .++. ..+-.-+
T Consensus 3 ~~~~l~~~F~~~~-kI~---~~S~~e~~~~p~~~~~~k~~~~~------v~-dE~~~i~-~-----~~~a---~~~~~~~ 62 (414)
T COG2195 3 KMERLLDRFLELV-KIP---TQSKHEKAVAPSTVGQAKLLGLL------VE-DELGNIG-L-----KKPA---TAGENYV 62 (414)
T ss_pred chHHHHHHHHHHe-eCC---CCCCCccccccccHHHHHHcCch------hh-hhhcccc-c-----cccc---cCCCCee
Confidence 4577888888888 343 24566668888998888888732 22 2111000 0 0000 0111123
Q ss_pred EEEEeCCCCCCCCCEEEEeeecCCCCC-----------------------------------------------CCC---
Q 007484 132 VMRISSTDSQDTDPSVLMNGHFDGPLS-----------------------------------------------SPG--- 161 (602)
Q Consensus 132 i~~i~g~~~~~~~~~vll~aH~Dsv~~-----------------------------------------------~pG--- 161 (602)
.+++++..+ .-+.+-..+|+|+.+. .-|
T Consensus 63 ~~~L~a~~d--~V~~i~~~sh~Dt~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~L 140 (414)
T COG2195 63 PAVLQAHLD--MVPEIGFISHHDTVPDPIGPNVNPQILKATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATL 140 (414)
T ss_pred eEEeecccc--ccccccccccccccccccccccCCceeeeccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccc
Confidence 344555321 2234556677776621 123
Q ss_pred -CCCChhHHHHHHHHHHHHHhcC-CCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEec
Q 007484 162 -AGDCGSCVASMLELARLTIDSG-WIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVE 225 (602)
Q Consensus 162 -A~D~~sGva~~LE~ar~L~~~~-~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD 225 (602)
..||++|.+.++++++.+.+.. .-+..+|++.|+++||.|+.|++.+.-. .-.+....++|
T Consensus 141 LgaD~kAGia~i~~al~~~~~~~~~i~h~~i~~g~s~~Ee~g~rg~~~~~~a---~f~a~~ay~iD 203 (414)
T COG2195 141 LGADDKAGIAEIMTALSVLREKHPEIPHGGIRGGFSPDEEIGGRGAANKDVA---RFLADFAYTLD 203 (414)
T ss_pred cCCcchhHHHHHHHHHHHHhhcCccccccCeEEEecchHHhhhhhhhhccHH---hhhcceeEecC
Confidence 3488899999999999998553 4566799999999999999999987653 23455667777
No 85
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=94.36 E-value=0.3 Score=55.24 Aligned_cols=97 Identities=22% Similarity=0.276 Sum_probs=72.7
Q ss_pred cceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHH
Q 007484 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHG 207 (602)
Q Consensus 128 ~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~ 207 (602)
++|+.+.++.... +..+.+++.+-+++.. | .-|..|++.+|.++|.+++..+- .++|+|++.++| ..|.++
T Consensus 3 G~nvy~i~rapR~-d~tEaivl~~~~~~~~---~-~~n~~~v~l~lal~~~~~~~~~w-sKDii~l~~~~~---~~g~~a 73 (504)
T PF04114_consen 3 GTNVYGILRAPRG-DGTEAIVLVVPWRDSD---G-EYNAGGVALALALARYFRRQSYW-SKDIIFLFTDDE---LAGMQA 73 (504)
T ss_pred ceEEEEEEecCCC-CCceeEEEEEecCCCC---c-ccchhhHHHHHHHHHHhhhchhh-hccEEEEecCCc---chHHHH
Confidence 4699999976543 4567899999888644 2 44588999999999999986543 689999999865 467889
Q ss_pred HHhhcC-----------c---cCceeEEEEeccCCCCCCc
Q 007484 208 FMKAHK-----------W---RDSVGAVINVEASGTGGLD 233 (602)
Q Consensus 208 f~~~h~-----------~---~~~i~a~INLD~~G~gg~~ 233 (602)
|++++- . +-.+.+.||+|-.+.....
T Consensus 74 wl~~Yh~~~~~~~~~~~l~~~~G~i~aAl~le~~~~~~~~ 113 (504)
T PF04114_consen 74 WLEAYHDSNTKGLSSSPLPLRAGSIQAALVLEYPSDSFSS 113 (504)
T ss_pred HHHHHhCCCCccccccCCCCCCcceeEEEEEEecCCCccE
Confidence 997651 1 1367899999987655443
No 86
>PRK02256 putative aminopeptidase 1; Provisional
Probab=82.55 E-value=1.9 Score=48.30 Aligned_cols=46 Identities=22% Similarity=0.175 Sum_probs=39.0
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHH
Q 007484 160 PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFM 209 (602)
Q Consensus 160 pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~ 209 (602)
.++-||-.||.+++|+++... .++..+++++++-||.|..|+++-.
T Consensus 256 s~rLDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs~ga~gA~ 301 (462)
T PRK02256 256 AYGQDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGSEGNTGAQ 301 (462)
T ss_pred ccccccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCCcchhhhc
Confidence 678999999999999998664 3567899999999999998777654
No 87
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=80.00 E-value=8.2 Score=43.31 Aligned_cols=51 Identities=10% Similarity=-0.107 Sum_probs=36.9
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcC-CCCCCCEEEEEeCcccCCccchHHHHh
Q 007484 160 PGAGDCGSCVASMLELARLTIDSG-WIPPRPIIFLFNGAEELFMLGAHGFMK 210 (602)
Q Consensus 160 pGA~D~~sGva~~LE~ar~L~~~~-~~p~~~I~flf~~aEE~gl~GS~~f~~ 210 (602)
.++-||-.||.+++|+++...+.. ..+....++++++-||.|..|+++-..
T Consensus 247 s~rlDnr~~~~~~l~al~~~~~~~~~~~~~~~v~~~~d~EEVGs~ga~GA~s 298 (465)
T PTZ00371 247 SPRLDNLGSSFCAFKALTEAVESLGENSSNIRMVCLFDHEEVGSSSSQGAGS 298 (465)
T ss_pred EecchhHHHHHHHHHHHHhccccccCCCCceEEEEEECCcCCCCCcchhccc
Confidence 468899999999999998765310 113344455559999999988876543
No 88
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=71.81 E-value=32 Score=39.27 Aligned_cols=75 Identities=21% Similarity=0.289 Sum_probs=56.6
Q ss_pred cceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHH
Q 007484 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHG 207 (602)
Q Consensus 128 ~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~ 207 (602)
+.||.+.+++... +..+.+++..-+|.-. |. |..|++.++..++.+++..+ -.++|+|+++++ ...|-.+
T Consensus 120 G~NvyGilRAPRg-dgtEsivl~vP~~~~~---~~--~~~~v~l~lsla~~f~r~~y-WsKDII~v~~d~---~~~g~~A 189 (617)
T KOG3566|consen 120 GENVYGILRAPRG-DGTESIVLVVPYGRSS---GS--NSASVALLLSLADYFSRWVY-WSKDIIFVFTDG---PALGLDA 189 (617)
T ss_pred CceEEEEEecCCC-CCcceEEEEEecccCC---Cc--chhHHHHHHHHHHHhcCCee-ecccEEEEEeCC---ccccHHH
Confidence 6799999987542 4557788888887644 23 47899999999999986532 357999999988 4667788
Q ss_pred HHhhc
Q 007484 208 FMKAH 212 (602)
Q Consensus 208 f~~~h 212 (602)
|.+++
T Consensus 190 wLeaY 194 (617)
T KOG3566|consen 190 WLEAY 194 (617)
T ss_pred HHHHh
Confidence 88764
No 89
>PRK02813 putative aminopeptidase 2; Provisional
Probab=65.59 E-value=5.4 Score=44.30 Aligned_cols=137 Identities=15% Similarity=0.049 Sum_probs=79.6
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCcc---chHH-HHhh---------------cCccCceeE
Q 007484 160 PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFML---GAHG-FMKA---------------HKWRDSVGA 220 (602)
Q Consensus 160 pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~---GS~~-f~~~---------------h~~~~~i~a 220 (602)
.++-||-.||.+++|+++.+.+ +.++++++++-||.|.. |++. |.++ ....-+-..
T Consensus 230 s~~lDnr~~~~~~l~al~~~~~-----~~~~~~~~~d~EEVGs~~~~GA~s~~l~~~l~ri~~~~~~~~~~~~~~i~~s~ 304 (428)
T PRK02813 230 SGRLDNLSSCHAGLEALLAAAS-----DATNVLAAFDHEEVGSATKQGADSPFLEDVLERIVLALGGDREDFLRALARSF 304 (428)
T ss_pred EecchhHHHHHHHHHHHHhcCC-----CCeEEEEEEecCccCCCCCcccCchhHHHHHHHHHHhhcCchHHHHHhhCCCe
Confidence 5789999999999999987642 67899999999999998 7764 1110 001224467
Q ss_pred EEEeccCCCCCCce--E--------EecCCCCChhhhh------------------hhhhccccccccccccc-CCCCCC
Q 007484 221 VINVEASGTGGLDL--V--------CQSGPSSWPSSVY------------------AQSAIYPMAHSAAQDVF-PVIPGD 271 (602)
Q Consensus 221 ~INLD~~G~gg~~~--l--------fq~gp~~~~~~~y------------------~~~~~~p~~~~~~~e~f-~~ips~ 271 (602)
+|.+|.+-+..+.. . .-.|| - ++.. .+...-|+-. .+. ...|++
T Consensus 305 ~IS~DvahA~hPn~~~~~~~~~~~~lg~Gp--v-Ik~~~~~~y~t~~~~~a~~~~ia~~~~Ip~Q~----~v~~~d~~gG 377 (428)
T PRK02813 305 LISADMAHAVHPNYPEKHDPTHRPLLNKGP--V-IKINANQRYATDAESAAVFKLLCEKAGVPYQE----FVNRSDMPCG 377 (428)
T ss_pred EEEEeccCCCCCCCCCccCcccCccCCcCC--e-EEECCCCCcccCHHHHHHHHHHHHHcCCCEEE----EEecCCCCCc
Confidence 78888764332111 0 11111 1 1111 0011111110 011 234678
Q ss_pred CchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCH
Q 007484 272 TDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLP 310 (602)
Q Consensus 272 tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~ 310 (602)
||-.++.....|+|.+|+.-- --.=||+..+...-|.
T Consensus 378 stig~i~~s~~Gi~tvdiGiP--~l~MHS~~E~~~~~D~ 414 (428)
T PRK02813 378 STIGPITAARLGIRTVDVGAP--MLAMHSARELAGVKDH 414 (428)
T ss_pred cHHHHHHHhCCCCcEEEeChh--hcccccHHHHccHHHH
Confidence 998887643479999997431 1256998887775553
No 90
>PRK02813 putative aminopeptidase 2; Provisional
Probab=49.17 E-value=72 Score=35.50 Aligned_cols=63 Identities=16% Similarity=0.196 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhcccccCCCceeEEEEee-----eecCccccccccccccccccccceEEEEEeCCCCCCCCCEEEEeee
Q 007484 78 REAAVYIKTQLEGIKERAGPKFRIEIEEN-----VVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGH 152 (602)
Q Consensus 78 e~a~~yL~~~l~~ig~~~~~~~~vevd~~-----~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~vll~aH 152 (602)
-.+++++++.|++-|... +++. ...|.|. .-++...+++-.-|+++...+..-+++||
T Consensus 22 ~hav~~~~~~L~~~Gf~~-------l~e~~~w~l~~g~kyy----------~~r~~~sliAf~vg~~~~~~~g~~iv~aH 84 (428)
T PRK02813 22 FHAVANVAQRLEAAGFTE-------LDETDAWKLEPGGRYY----------VVRNGSSLIAFRVGEGAPAETGFRIVGAH 84 (428)
T ss_pred HHHHHHHHHHHHHcCCee-------ccccccCccCCCCEEE----------EEcCCcEEEEEEeCCCCccCCCeEEEEEe
Confidence 478999999999988432 2211 1122222 12455678887777654223568999999
Q ss_pred cCCCC
Q 007484 153 FDGPL 157 (602)
Q Consensus 153 ~Dsv~ 157 (602)
.|+..
T Consensus 85 ~DsP~ 89 (428)
T PRK02813 85 TDSPG 89 (428)
T ss_pred ccCCC
Confidence 99854
No 91
>PRK13755 putative mercury transport protein MerC; Provisional
Probab=48.82 E-value=1.1e+02 Score=28.03 Aligned_cols=35 Identities=23% Similarity=0.577 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeech
Q 007484 408 VKGMMIHATGKMLAIIFPIAFSVLRLLFSGYAMSWFAH 445 (602)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~m~w~s~ 445 (602)
..||+-+.=|+.+...+|+..++.+. -+.+.||+|
T Consensus 38 GLGFLsq~EGLFi~~LlPlFA~iALl---analgW~sH 72 (139)
T PRK13755 38 GLGFLSQYEGLFISTLLPLFAAIALL---ANALGWFSH 72 (139)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence 34455556666666667764443222 467777776
No 92
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism]
Probab=41.60 E-value=47 Score=36.65 Aligned_cols=72 Identities=15% Similarity=0.112 Sum_probs=45.7
Q ss_pred ChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEEeCCCCCCCCCEEEEeeec
Q 007484 74 RPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHF 153 (602)
Q Consensus 74 S~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~vll~aH~ 153 (602)
|+..-.++.++.+.+.+.|.+.-. +.+-+.....|.|. .-++..++++-.-|++....++.-+++||.
T Consensus 20 spTpyh~v~~i~~~L~~~Gf~~l~--e~~~w~~~~ggkyf----------~~r~gssliAf~ig~~~~~~~gf~IigaHt 87 (437)
T COG1362 20 SPTPYHVVANIAERLLKAGFRELE--EKDAWKDKPGGKYF----------VTRNGSSLIAFIIGKKWKLESGFRIIGAHT 87 (437)
T ss_pred CCChHHHHHHHHHHHHHcCchhhh--hhhcccccCCCeEE----------EEcCCceEEEEEecCCCCCCCCeEEEEeec
Confidence 344457899999999998854311 11111111223322 225667999999888754567889999999
Q ss_pred CCCC
Q 007484 154 DGPL 157 (602)
Q Consensus 154 Dsv~ 157 (602)
||..
T Consensus 88 DSP~ 91 (437)
T COG1362 88 DSPR 91 (437)
T ss_pred CCCC
Confidence 9943
No 93
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=38.14 E-value=1.3e+02 Score=33.81 Aligned_cols=68 Identities=18% Similarity=0.118 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEEeCCCCC-CCCCEEEEeeecCCC
Q 007484 78 REAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQ-DTDPSVLMNGHFDGP 156 (602)
Q Consensus 78 e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g~~~~-~~~~~vll~aH~Dsv 156 (602)
-.+++++.+.|++-|.+.-++ -+-.+....|.|.. .++...+++-.-|++.. ..+..-+++||.||.
T Consensus 23 ~hav~~~~~~L~~~GF~~l~e--~~~w~l~~g~kyyv----------~r~~ssl~Af~vg~~~~~~~~g~~ivgaHtDsP 90 (465)
T PTZ00371 23 FHAVQELKERLKKSGFKQLNE--GENWKLEKGGKYYL----------TRNNSTIVAFTVGKKFDAPNGGFKIVGAHTDSP 90 (465)
T ss_pred HHHHHHHHHHHHHCcCEEccc--cccCccCCCCEEEE----------EcCCcEEEEEEeCCCCccCCCCeEEEEEeccCC
Confidence 478999999999988532110 00011112222221 24455787777665421 234688999999995
Q ss_pred C
Q 007484 157 L 157 (602)
Q Consensus 157 ~ 157 (602)
.
T Consensus 91 ~ 91 (465)
T PTZ00371 91 C 91 (465)
T ss_pred C
Confidence 3
No 94
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=27.61 E-value=2.7e+02 Score=27.31 Aligned_cols=42 Identities=14% Similarity=0.173 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHH-HhhhhHHHHHHHHHHHhHHHHHHHHHhh
Q 007484 495 GAFGFYAMLTMAYL-VAGLTGGFLTFIVATSMLPAWIFFCISI 536 (602)
Q Consensus 495 ~~~~~~~~l~~~~~-~~g~~s~y~~~~~~~~~~~~~~~~~l~~ 536 (602)
-.+++.++++++++ ..|++.+|..+-.+++.+.+.-+.|+..
T Consensus 121 Ivcv~~Si~ti~~~~~s~s~~~~ti~yIiL~iLf~~Ya~nl~~ 163 (189)
T PF05313_consen 121 IVCVIMSIITIIVNSVSGSSGAYTISYIILAILFCIYAFNLTG 163 (189)
T ss_pred HHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHHHHHHheeeccc
Confidence 34567777777666 4578888888888888777665555433
No 95
>PF04253 TFR_dimer: Transferrin receptor-like dimerisation domain; InterPro: IPR007365 This entry represents the dimerisation domain found in the transferrin receptor, as well as in a number of other proteins including glutamate carboxypeptidase II and N-acetylated-alpha-linked acidic dipeptidase like protein. The transferrin receptor (TfR) assists iron uptake into vertebrate cells through a cycle of endo- and exocytosis of the iron transport protein transferrin (Tf). TfR binds iron-loaded (diferric) Tf at the cell surface and carries it to the endosome, where the iron dissociates from Tf. The apo-Tf remains bound to TfR until it reaches the cell surface, where apo-Tf is replaced by diferric Tf from the serum to begin the cycle again. Human TfR is a homodimeric type II transmembrane protein. The crystal structure of a TfR monomer reveals a 3-domain structure: a protease-like domain that closely resembles carboxy- and amino-peptidases; an apical domain consisting of a beta-sandwich; and a helical dimerisation domain. The dimerisation domain consists of a 4-helical bundle that makes contact with each of the three domains in the dimer partner [].; PDB: 3FF3_A 3FEC_A 3FED_A 3FEE_A 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A ....
Probab=24.42 E-value=9.6 Score=34.57 Aligned_cols=51 Identities=18% Similarity=0.126 Sum_probs=33.6
Q ss_pred eEccchhHhhhHccHHHHHHHHhhHHHHh-----hccceEEEEecccchhhhhhHHH
Q 007484 355 IFFDYLTWFMIYYSRSRATVLHGIPIVIF-----ITVPFFLRLLNSGLHSWFATYSD 406 (602)
Q Consensus 355 V~fd~lg~~~v~y~~~~a~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 406 (602)
|.|+.|-.++..|.. .|.-++..+.... ...+..+|++|++++..||.|+.
T Consensus 2 l~l~~L~~ai~~~~~-aa~~f~~~~~~~~~~~~~~~~~~~~r~~N~~L~~~Er~Fl~ 57 (125)
T PF04253_consen 2 LDLDPLKKAISKFKK-AAKEFQEWIKSWDEIVGIEPDPLAVRRLNDRLMQFERAFLD 57 (125)
T ss_dssp --SHHHHHHHHHHHH-HHHHHHHHHHHS------TT-HHHHHHHHHHHHHHHHCTB-
T ss_pred cChHHHHHHHHHHHH-HHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHHHHHhC
Confidence 567788888888888 5666766554443 33344667779999999997653
No 96
>PRK10263 DNA translocase FtsK; Provisional
Probab=21.02 E-value=8.2e+02 Score=31.37 Aligned_cols=30 Identities=13% Similarity=0.266 Sum_probs=15.4
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007484 398 HSWFATYSDFVKGMMIHATGKMLAIIFPIAF 428 (602)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (602)
.++...+...+..+++.++|+ .+.++|+++
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFGl-~AYLLP~LL 90 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFGV-MAYTIPVII 90 (1355)
T ss_pred ccccchHHHHHHHHHHHHHhH-HHHHHHHHH
Confidence 344445555555655555553 444455433
No 97
>COG3152 Predicted membrane protein [Function unknown]
Probab=20.78 E-value=1.7e+02 Score=26.92 Aligned_cols=20 Identities=10% Similarity=-0.184 Sum_probs=14.4
Q ss_pred hhhhcCCCce-e-EEEEeeccc
Q 007484 535 SINFYGRRSL-R-VLRTRYCSG 554 (602)
Q Consensus 535 ~~~~~~~~~~-~-~~~~~~p~~ 554 (602)
.+++||+++. | ..++++|++
T Consensus 72 vrRLHD~g~sgw~~Ll~lip~v 93 (125)
T COG3152 72 VRRLHDRGRSGWWALLALIPVV 93 (125)
T ss_pred HHHHHhcCCchHHHHHHHHHHH
Confidence 4888988773 3 333899988
No 98
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=20.39 E-value=1.6e+02 Score=27.12 Aligned_cols=32 Identities=16% Similarity=0.181 Sum_probs=19.1
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 007484 7 YRDVTAFKVLLVLSFMYGLMSALVYSIVHLKF 38 (602)
Q Consensus 7 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 38 (602)
++.+...-++.+++.+++..+++.|++.+++.
T Consensus 62 s~~~i~~Ii~gv~aGvIg~Illi~y~irR~~K 93 (122)
T PF01102_consen 62 SEPAIIGIIFGVMAGVIGIILLISYCIRRLRK 93 (122)
T ss_dssp S-TCHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred cccceeehhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34455555666677777777767776665543
Done!