Query 007484
Match_columns 602
No_of_seqs 408 out of 2138
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 02:51:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007484.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007484hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fuu_A Leucine aminopeptidase; 100.0 1.4E-40 5E-45 347.0 24.3 254 48-326 19-307 (309)
2 4f9u_A CG32412; alpha/beta hyd 100.0 4.1E-37 1.4E-41 321.1 24.4 254 52-330 9-300 (312)
3 3tc8_A Leucine aminopeptidase; 100.0 4.2E-36 1.4E-40 313.4 24.8 255 46-326 17-308 (309)
4 4fai_A CG5976, isoform B; alph 100.0 1.1E-36 3.9E-41 320.5 18.9 256 50-327 30-322 (330)
5 3gux_A Putative Zn-dependent e 100.0 2.2E-35 7.4E-40 308.5 23.8 252 48-326 21-312 (314)
6 3kas_A Transferrin receptor pr 100.0 2E-35 6.7E-40 334.0 15.4 273 127-406 265-567 (640)
7 3pb6_X Glutaminyl-peptide cycl 100.0 3.4E-34 1.2E-38 301.0 20.9 255 48-327 33-327 (330)
8 1tkj_A Aminopeptidase, SGAP; d 100.0 1.1E-32 3.7E-37 284.0 25.9 255 49-334 2-282 (284)
9 2afw_A Glutaminyl-peptide cycl 100.0 5.9E-33 2E-37 292.0 21.5 252 48-327 25-326 (329)
10 3fed_A Glutamate carboxypeptid 100.0 3.2E-34 1.1E-38 327.0 7.7 274 126-405 310-633 (707)
11 1rtq_A Bacterial leucyl aminop 100.0 2.3E-31 7.9E-36 276.0 24.3 264 48-335 14-294 (299)
12 3iib_A Peptidase M28; YP_92679 100.0 3.4E-28 1.2E-32 265.6 19.8 200 126-333 233-436 (444)
13 2ek8_A Aminopeptidase; metallo 100.0 3.5E-27 1.2E-31 255.8 22.6 205 127-339 202-412 (421)
14 3k9t_A Putative peptidase; str 99.9 1.7E-20 5.9E-25 198.9 22.7 199 98-331 153-357 (435)
15 4h2k_A Succinyl-diaminopimelat 99.7 6.1E-17 2.1E-21 165.0 19.2 232 54-329 6-268 (269)
16 3t68_A Succinyl-diaminopimelat 99.7 8.1E-17 2.8E-21 163.9 16.4 232 54-329 6-268 (268)
17 1q7l_A Aminoacylase-1; catalys 99.6 3E-15 1E-19 145.7 16.5 146 50-223 6-174 (198)
18 1vhe_A Aminopeptidase/glucanas 99.6 2.5E-14 8.7E-19 152.3 16.3 226 55-329 8-354 (373)
19 1y0y_A FRV operon protein FRVX 99.5 3E-14 1E-18 150.5 14.4 222 56-329 8-350 (353)
20 2gre_A Deblocking aminopeptida 99.5 9.2E-14 3.2E-18 146.6 17.0 221 52-325 4-343 (349)
21 2wyr_A Cobalt-activated peptid 99.5 4.9E-14 1.7E-18 147.5 14.6 147 162-326 171-331 (332)
22 1cg2_A Carboxypeptidase G2; me 99.5 4.1E-13 1.4E-17 143.4 16.5 146 53-228 18-181 (393)
23 3n5f_A L-carbamoylase, N-carba 99.5 4.2E-13 1.4E-17 144.1 16.6 129 52-212 3-143 (408)
24 2zog_A Cytosolic non-specific 99.5 1.6E-12 5.4E-17 142.4 19.2 156 53-227 19-201 (479)
25 2pok_A Peptidase, M20/M25/M40 99.4 1.2E-12 4E-17 143.7 15.9 145 55-227 45-211 (481)
26 2fvg_A Endoglucanase; TM1049, 99.4 4.1E-13 1.4E-17 141.1 10.9 152 162-329 165-335 (340)
27 3ct9_A Acetylornithine deacety 99.4 4E-12 1.4E-16 134.2 16.7 134 54-227 11-164 (356)
28 3pfo_A Putative acetylornithin 99.4 8.2E-12 2.8E-16 134.8 17.5 157 54-228 26-205 (433)
29 3ife_A Peptidase T; metallopep 99.4 2.9E-12 9.8E-17 138.9 13.5 139 54-226 27-224 (434)
30 3dlj_A Beta-Ala-His dipeptidas 99.4 1.3E-11 4.4E-16 135.7 18.4 151 54-227 25-208 (485)
31 3gb0_A Peptidase T; NP_980509. 99.3 9.8E-12 3.3E-16 131.6 13.9 149 51-229 3-169 (373)
32 2v8h_A Beta-alanine synthase; 99.3 7.6E-12 2.6E-16 137.2 13.1 128 50-210 28-175 (474)
33 2rb7_A Peptidase, M20/M25/M40 99.3 9.4E-12 3.2E-16 131.7 12.3 139 52-226 4-164 (364)
34 1z2l_A Allantoate amidohydrola 99.3 1E-11 3.5E-16 133.7 12.5 126 53-210 8-145 (423)
35 3tx8_A Succinyl-diaminopimelat 99.3 2.1E-11 7.3E-16 128.8 14.5 138 55-227 14-167 (369)
36 3rza_A Tripeptidase; phosphory 99.3 1.7E-11 5.8E-16 131.1 13.2 157 44-228 14-189 (396)
37 1vgy_A Succinyl-diaminopimelat 99.3 3.3E-11 1.1E-15 128.5 14.5 141 53-227 5-168 (393)
38 1fno_A Peptidase T; metallo pe 99.2 3.1E-11 1E-15 129.9 11.2 138 55-227 3-198 (417)
39 3isz_A Succinyl-diaminopimelat 99.2 1.1E-10 3.7E-15 123.1 15.2 140 54-227 3-165 (377)
40 3khx_A Putative dipeptidase sa 99.2 1.3E-10 4.5E-15 128.1 15.9 135 53-226 33-197 (492)
41 1lfw_A PEPV; hydrolase, dipept 99.2 2E-10 6.9E-15 125.3 16.6 126 53-213 13-168 (470)
42 3mru_A Aminoacyl-histidine dip 99.2 4.5E-11 1.6E-15 131.7 10.3 141 48-227 8-175 (490)
43 3pfe_A Succinyl-diaminopimelat 99.2 1.5E-10 5.2E-15 126.8 14.3 146 54-227 18-193 (472)
44 2f7v_A Aectylcitrulline deacet 99.1 2.3E-10 7.9E-15 121.1 13.5 131 53-227 8-160 (369)
45 1vho_A Endoglucanase; structur 99.1 5E-10 1.7E-14 117.5 15.8 220 56-329 7-336 (346)
46 1ylo_A Hypothetical protein SF 99.1 7.3E-10 2.5E-14 116.2 16.1 150 162-328 167-337 (348)
47 1xmb_A IAA-amino acid hydrolas 99.1 9.3E-10 3.2E-14 118.5 15.9 135 54-225 28-176 (418)
48 3kl9_A PEPA, glutamyl aminopep 99.1 6.2E-10 2.1E-14 117.9 12.9 222 55-328 4-345 (355)
49 2qyv_A XAA-His dipeptidase; YP 99.1 5.1E-10 1.7E-14 122.9 12.5 140 50-228 7-173 (487)
50 1ysj_A Protein YXEP; M20 famil 99.1 1.4E-09 4.9E-14 116.6 15.1 137 53-224 31-181 (404)
51 3cpx_A Aminopeptidase, M42 fam 99.1 4.5E-10 1.5E-14 117.2 10.7 221 56-326 19-320 (321)
52 3ram_A HMRA protein; two-domai 98.9 2.3E-09 8E-14 114.7 11.3 140 54-227 16-158 (394)
53 2vpu_A TET3, 354AA long hypoth 98.8 7.7E-08 2.6E-12 101.7 17.5 219 56-329 11-349 (354)
54 3io1_A Aminobenzoyl-glutamate 98.8 4.1E-08 1.4E-12 106.6 13.9 158 54-226 14-210 (445)
55 3isx_A Endoglucanase; TM1050, 98.5 1.2E-06 4.2E-11 92.1 14.9 217 56-324 13-341 (343)
56 2wzn_A TET3, 354AA long hypoth 98.3 1.6E-05 5.4E-10 80.3 16.9 58 268-330 293-350 (354)
57 3iib_A Peptidase M28; YP_92679 95.8 0.0075 2.6E-07 65.3 5.4 43 51-93 18-60 (444)
58 2ek8_A Aminopeptidase; metallo 94.4 0.05 1.7E-06 58.2 6.7 44 48-93 10-53 (421)
59 3kas_A Transferrin receptor pr 87.8 0.14 4.9E-06 57.8 1.2 45 50-94 14-59 (640)
60 3fed_A Glutamate carboxypeptid 87.2 0.54 1.9E-05 53.7 5.5 43 49-93 20-62 (707)
61 2ijz_A Probable M18-family ami 86.1 0.79 2.7E-05 49.2 5.8 144 160-310 231-411 (428)
62 2glj_A Probable M18-family ami 75.7 0.91 3.1E-05 49.2 1.7 44 161-208 258-301 (461)
63 2glf_A Probable M18-family ami 73.8 1.5 5.2E-05 47.4 2.8 42 161-207 246-287 (450)
64 1y7e_A Probable M18-family ami 71.9 0.68 2.3E-05 50.2 -0.5 45 161-208 252-296 (458)
65 2ijz_A Probable M18-family ami 58.1 4.7 0.00016 43.2 2.8 74 72-157 13-86 (428)
66 3vat_A Dnpep, aspartyl aminope 49.5 4.7 0.00016 44.0 1.0 46 161-207 282-331 (496)
67 2glf_A Probable M18-family ami 44.9 25 0.00085 37.8 5.8 64 78-157 34-97 (450)
68 1q7l_B Aminoacylase-1; catalys 41.8 52 0.0018 26.3 6.1 58 268-330 23-81 (88)
69 2lx0_A Membrane fusion protein 37.7 26 0.00089 22.6 2.7 18 580-597 8-25 (32)
70 3vat_A Dnpep, aspartyl aminope 32.7 30 0.001 37.6 4.0 65 75-156 50-119 (496)
71 2glj_A Probable M18-family ami 25.6 41 0.0014 36.2 3.5 66 79-157 39-106 (461)
72 1y7e_A Probable M18-family ami 23.9 42 0.0014 36.1 3.2 64 78-157 36-100 (458)
73 4eme_A M18 aspartyl aminopepti 21.5 83 0.0028 34.8 4.9 68 78-157 24-92 (571)
No 1
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.4e-40 Score=347.02 Aligned_cols=254 Identities=18% Similarity=0.163 Sum_probs=193.3
Q ss_pred cCcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccc
Q 007484 48 LDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRN 127 (602)
Q Consensus 48 ~~~Fs~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~ 127 (602)
.++||++||++++++|+ ++|||.+||++++++++||+++|+++| ++++.+.....+. ...+.+
T Consensus 19 ~p~f~~~~a~~~l~~l~-~fgpR~~gS~~~~~a~~~i~~~l~~~g------~~v~~q~~~~~~~----------~~~~~~ 81 (309)
T 4fuu_A 19 VPQFDADSAYLYVKNQV-DFGPRVPNTKEHVACGNYLAGKLEAFG------AKVTNQYADLIAY----------DGTLLK 81 (309)
T ss_dssp CCCCCHHHHHHHHHHHH-TTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEECT----------TSCEEE
T ss_pred CCccCHHHHHHHHHHHh-CcCCcCCCCHHHHHHHHHHHHHHHHcC------CeeEEEeEEeccC----------CCCcce
Confidence 45899999999999999 799999999999999999999999998 5666654433210 112345
Q ss_pred cceEEEEEeCCCCCCCCCEEEEeeecCCCCCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEE
Q 007484 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS-------------PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLF 194 (602)
Q Consensus 128 ~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~-------------pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf 194 (602)
.+|||++++|+. ++.|+++|||||++.+ +||+||++|||+|||++|.|.+. +|+++|+|+|
T Consensus 82 ~~Nii~~~~g~~----~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~~ 155 (309)
T 4fuu_A 82 ARNIIGSYKPES----KKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDIIF 155 (309)
T ss_dssp EEEEEEEESTTC----SSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEEE
T ss_pred eEEEEEEECCCC----CceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEEe
Confidence 689999999863 4689999999998753 69999999999999999999874 7899999999
Q ss_pred eCcccCCc--------------cchHHHHhhcC-ccCceeEEEEeccCCCCCCceEEecCCCCC---hhhhhhhhhcccc
Q 007484 195 NGAEELFM--------------LGAHGFMKAHK-WRDSVGAVINVEASGTGGLDLVCQSGPSSW---PSSVYAQSAIYPM 256 (602)
Q Consensus 195 ~~aEE~gl--------------~GS~~f~~~h~-~~~~i~a~INLD~~G~gg~~~lfq~gp~~~---~~~~y~~~~~~p~ 256 (602)
|++||.|+ .||+.|+++++ +.++++++||+|++|.+++.+..+.....+ +.+...+......
T Consensus 156 ~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDmvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
T 4fuu_A 156 LDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDMVGGENSVFLKEGYSEEFAPDINKKVWKAAKKAG 235 (309)
T ss_dssp ECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECSCCBTTCCEEECHHHHHHCHHHHHHHHHHHHHTT
T ss_pred ecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeeeccCCCCCceEeecCchhhhHHHHHHHHHHHHhcC
Confidence 99999995 89999998763 458999999999999988776655432211 1111111111110
Q ss_pred cccccccccCCCCCCCchHHHhhcCCCCcEEEEEeecC----CCcCCCcccccCCCCHHHHHHHHHHHHHHHHH
Q 007484 257 AHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIG----GYYYHTSHDTVDRLLPGSVQARGDNLFNVLKA 326 (602)
Q Consensus 257 ~~~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~----~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~ 326 (602)
......+. ......+||.+|.+ .+|||++++..... .++|||+.||+|+||+++||++|+++++++.+
T Consensus 236 ~~~~~~~~-~~~~~~sDh~~F~~-~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~vg~~vl~~ly~ 307 (309)
T 4fuu_A 236 YGKTFIDE-RGDTITDDHLFINR-LARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKAVGQTVLEVIYN 307 (309)
T ss_dssp CTTTEEEE-ECCCCCCHHHHHHH-HTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHHH
T ss_pred Cccccccc-CCCCCCCChHHHHh-cCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHHHHHHHHHHHhh
Confidence 00000000 11223689999985 47999999876432 34899999999999999999999999999863
No 2
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=100.00 E-value=4.1e-37 Score=321.06 Aligned_cols=254 Identities=16% Similarity=0.175 Sum_probs=187.2
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceE
Q 007484 52 SEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNI 131 (602)
Q Consensus 52 s~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NV 131 (602)
++++..+.|+.+ ++||.+||++++++++||+++|+++| ++++++....+.. .....+.+||
T Consensus 9 ~~~~~~~~l~~i---l~PR~~gs~~~~~~~~~i~~~l~~~g------~~v~~~~f~~~~~----------~~~~~~~~Ni 69 (312)
T 4f9u_A 9 DEVHFNRTLDSI---LVPRVVGSRGHQQVREYLVQSLNGLG------FQTEVDEFKQRVP----------VFGELTFANV 69 (312)
T ss_dssp CHHHHHHHHHHH---CSCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEET----------TTEEEEEEEE
T ss_pred HHHHHHHHHHHh---cCCCCCCCHHHHHHHHHHHHHHHHCC------CeEEEEeEEEecC----------CCCceeEEEE
Confidence 455555666655 46999999999999999999999998 6777776544321 0123456899
Q ss_pred EEEEeCCCCCCCCCEEEEeeecCCCC-----CCCCCCCChhHHHHHHHHHHHHHh-----cCCCCCCCEEEEEeCcccCC
Q 007484 132 VMRISSTDSQDTDPSVLMNGHFDGPL-----SSPGAGDCGSCVASMLELARLTID-----SGWIPPRPIIFLFNGAEELF 201 (602)
Q Consensus 132 i~~i~g~~~~~~~~~vll~aH~Dsv~-----~~pGA~D~~sGva~~LE~ar~L~~-----~~~~p~~~I~flf~~aEE~g 201 (602)
|++++|+ ++++|+++|||||++ ..+||+||++|||+|||++|.|.+ .+.+|+|+|+|+||+|||.|
T Consensus 70 i~~~~~~----~~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G 145 (312)
T 4f9u_A 70 VGTINPQ----AQNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAF 145 (312)
T ss_dssp EEEESTT----SSEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCS
T ss_pred EEEECCC----CCceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCcccc
Confidence 9999985 357899999999985 368999999999999999999965 24689999999999999988
Q ss_pred --------ccchHHHHhhcCcc-------------CceeEEEEeccCCCCCCceEEecCCCCChh----hhhh---hhhc
Q 007484 202 --------MLGAHGFMKAHKWR-------------DSVGAVINVEASGTGGLDLVCQSGPSSWPS----SVYA---QSAI 253 (602)
Q Consensus 202 --------l~GS~~f~~~h~~~-------------~~i~a~INLD~~G~gg~~~lfq~gp~~~~~----~~y~---~~~~ 253 (602)
+.||+.|++++++. +++.++||+|++|..++..........+.. +..+ +...
T Consensus 146 ~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 225 (312)
T 4f9u_A 146 KEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEKSLRTAGQ 225 (312)
T ss_dssp SSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEESCCSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCccccccChHHHHHHHHhhccccccccccccccceeeeeeeeccccCCCCceEEEeccchhhhHHHHHHHHHHHhcc
Confidence 99999999987432 478999999999988766432111111111 1111 1111
Q ss_pred ccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHHHHhCC
Q 007484 254 YPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNS 330 (602)
Q Consensus 254 ~p~~~~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~a 330 (602)
.+...............+|||.+|.+ .|||++++.....+++|||+.||+|+||+++++++++++.+++.++...
T Consensus 226 ~~~~~~~~~~~~~~~~~~SDH~pF~~--~GIP~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~~ 300 (312)
T 4f9u_A 226 LEGNNNMFLSRVSGGLVDDDHRPFLD--ENVPVLHLVATPFPDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLKR 300 (312)
T ss_dssp SSSSCCCEEEEECSSCCCCTTHHHHT--TTCCEEEEECSSCCTTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCCCCCCchHHHHH--CCCCEEEEECCCCCCCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHhC
Confidence 11000000011111223789999986 7999999987777778999999999999999999999999999876543
No 3
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=100.00 E-value=4.2e-36 Score=313.38 Aligned_cols=255 Identities=19% Similarity=0.210 Sum_probs=194.7
Q ss_pred CCcCcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccc
Q 007484 46 APLDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGY 125 (602)
Q Consensus 46 ~~~~~Fs~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y 125 (602)
....+|+++|+++++++|+ ++++|..||++++++++||.++++++| ++++++....++. ...+
T Consensus 17 ~~~~~~~~~~~~~~l~~l~-~~~~R~~~s~~~~~~~~~l~~~l~~~G------~~v~~~~~~~~~~----------~g~~ 79 (309)
T 3tc8_A 17 SAVPDFNADSAYAYVANQV-AFGPRVPNTAAHKACGDYLASELKRFG------AKVYQQEAILTAY----------DGTK 79 (309)
T ss_dssp CCSCCCCHHHHHHHHHHHH-HTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEECT----------TSCE
T ss_pred hcccccCHHHHHHHHHHHH-ccCCCCCCCHHHHHHHHHHHHHHHHCC------CeEEEEEeecccc----------CCCc
Confidence 3467899999999999998 799999999999999999999999998 5666654332110 0123
Q ss_pred cccceEEEEEeCCCCCCCCCEEEEeeecCCCCCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 007484 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS-------------PGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (602)
Q Consensus 126 ~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~-------------pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~f 192 (602)
.+..||+++++|+ +++.|+++||+|||+.+ +||.||++|||++||++|.|++. +|+++|+|
T Consensus 80 ~~~~Nvia~~~g~----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~--~~~~~i~f 153 (309)
T 3tc8_A 80 LEARNIIGSFDPE----NSKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQK--APGIGIDI 153 (309)
T ss_dssp EEEEEEEEEESTT----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEE
T ss_pred ccceEEEEEECCC----CCceEEEEecccCCCCCCCCccccCCCccccCcccchHhHHHHHHHHHHHHhC--CCCCcEEE
Confidence 4568999999985 24789999999999876 79999999999999999999986 48999999
Q ss_pred EEeCcccCCc-------------cchHHHHhhcCc-cCceeEEEEeccCCCCCCceEEecCCCCC---hhhhhhhhhccc
Q 007484 193 LFNGAEELFM-------------LGAHGFMKAHKW-RDSVGAVINVEASGTGGLDLVCQSGPSSW---PSSVYAQSAIYP 255 (602)
Q Consensus 193 lf~~aEE~gl-------------~GS~~f~~~h~~-~~~i~a~INLD~~G~gg~~~lfq~gp~~~---~~~~y~~~~~~p 255 (602)
+++++||.|+ .||+.|+++++. .++++++||+|++|.+++.+........| +.+.+.+.+ +.
T Consensus 154 ~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~~G~~~~~~~~~~~~~~~~~~l~~~~~~~a-~~ 232 (309)
T 3tc8_A 154 IFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDMVGGKNATFFKEQQSLRAAAPIVEMVWSAA-RD 232 (309)
T ss_dssp EEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCEEECHHHHHHHHHHHHHHHHHH-HH
T ss_pred EEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEecccCCCCCceeecccccchHHHHHHHHHHHH-HH
Confidence 9999999999 999999985543 37899999999999988765332111111 122221211 11
Q ss_pred ccc-cccccccCCCCCCCchHHHhhcCCCCcEEEEEee------cCCCcCCCcccccCCCCHHHHHHHHHHHHHHHHH
Q 007484 256 MAH-SAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFL------IGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKA 326 (602)
Q Consensus 256 ~~~-~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~------~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~ 326 (602)
.+. ...++..+ ....|||.+|.+ +.|||++++... ...++|||+.||+|+||+++++++++++++++.+
T Consensus 233 ~g~~~~f~~~~~-g~~~sDh~~f~~-~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~vy~ 308 (309)
T 3tc8_A 233 LGYGKYFINAAG-GAITDDHQYVIS-GRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLKAAGQTVLEVIYN 308 (309)
T ss_dssp HTCTTTEEEEEC-CCCCCHHHHHHH-HHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHHH
T ss_pred cCCcceeccCCC-CCCCCccHHHHh-cCCCCEEEEecccCcccCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHhc
Confidence 110 00111011 112689999985 359999999765 2346999999999999999999999999999864
No 4
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=100.00 E-value=1.1e-36 Score=320.47 Aligned_cols=256 Identities=17% Similarity=0.178 Sum_probs=186.2
Q ss_pred cccHHHHHHHHHHHHHh-cCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccccccccccccccccc
Q 007484 50 RFSEARAIQHVRVLADE-IGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNH 128 (602)
Q Consensus 50 ~Fs~era~~~L~~La~~-ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~ 128 (602)
+|+..+...|++++.+. ++||++||++++++++||+++|+++| +++++|....... .....+.
T Consensus 30 ~~~~~~~~~~~~~~l~~il~pR~~Gs~~~~~~~~~i~~~l~~~g------~~v~~q~f~~~~~----------~~~~~~~ 93 (330)
T 4fai_A 30 EYSNLSDKLHLREAIDKILIPRVVGTTNHSIVREYIVQSLRDLD------WDVEVNSFHDHAP----------IKGKLHF 93 (330)
T ss_dssp HHHTCCCHHHHHHHHHHHCSCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEET----------TTEEEEE
T ss_pred hcccccHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEEeeeeeecC----------CCCceeE
Confidence 34444455666655433 58999999999999999999999998 6777776543221 0123456
Q ss_pred ceEEEEEeCCCCCCCCCEEEEeeecCCCCC----CCCCCCChhHHHHHHHHHHHHHh---cCCCCCCCEEEEEeCcccCC
Q 007484 129 TNIVMRISSTDSQDTDPSVLMNGHFDGPLS----SPGAGDCGSCVASMLELARLTID---SGWIPPRPIIFLFNGAEELF 201 (602)
Q Consensus 129 ~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~----~pGA~D~~sGva~~LE~ar~L~~---~~~~p~~~I~flf~~aEE~g 201 (602)
.|||++++|+ .+++|+++|||||++. .+||+||++|||+|||++|.|++ .+++|+++|+|+||+|||.|
T Consensus 94 ~Nii~~~~~~----~~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~G 169 (330)
T 4fai_A 94 HNIIATLNPN----AERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAF 169 (330)
T ss_dssp EEEEEESCTT----CSEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCS
T ss_pred EEEEEEECCC----CCcEEEEEEeecccccccCCCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEecccccc
Confidence 8999999885 3578999999999864 47999999999999999999965 35789999999999999998
Q ss_pred c--------cchHHHHhhc---CccCceeEEEEeccCCCCCCceEEecCCCCChhhhhh----hhh------ccc---cc
Q 007484 202 M--------LGAHGFMKAH---KWRDSVGAVINVEASGTGGLDLVCQSGPSSWPSSVYA----QSA------IYP---MA 257 (602)
Q Consensus 202 l--------~GS~~f~~~h---~~~~~i~a~INLD~~G~gg~~~lfq~gp~~~~~~~y~----~~~------~~p---~~ 257 (602)
+ .||++|+++. ...+++.++||+||+|.+++.+.....+..+...... +.. ..+ ..
T Consensus 170 l~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (330)
T 4fai_A 170 EEWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETRLAKLQLLERYASSGVA 249 (330)
T ss_dssp SSCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEECSCSSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTC----------
T ss_pred ccccccchhhhhHHHHhcchhccchhceeEEEEeccCccCCCCceeeccCcchHHHHHHHHHHHhhhhhhhhhhhccccc
Confidence 5 7999999864 2357999999999999988776443222111111100 000 000 00
Q ss_pred cccccccc-----CCCCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHHHH
Q 007484 258 HSAAQDVF-----PVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAF 327 (602)
Q Consensus 258 ~~~~~e~f-----~~ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~l 327 (602)
.......| ......|||.+|.+ .|||++++.....+++|||+.||+|+||+++++++++.+..++.+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~SDH~pF~~--~GIP~l~~i~~~~~~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~Ey 322 (330)
T 4fai_A 250 QRDPTRYFQSQAMRSSFIEDDHIPFLR--RNVPILHLIPVPFPSVWHTPDDNASVIDYATTDNLALIIRLFALEY 322 (330)
T ss_dssp -----CCEEEEEETTCCCCSTTHHHHT--TTCCEEEECCSSCCTTTTSTTSSGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCCCCCCchHHHHH--CCCCEEEEECCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHH
Confidence 00000011 11123689999986 7999999976666779999999999999999999999988877653
No 5
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=2.2e-35 Score=308.49 Aligned_cols=252 Identities=20% Similarity=0.228 Sum_probs=175.3
Q ss_pred cCcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccc
Q 007484 48 LDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRN 127 (602)
Q Consensus 48 ~~~Fs~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~ 127 (602)
.++|+++|++++|++|+ ++++|..||++++++++||.++++++| ++++++.....+ + ...+.+
T Consensus 21 ~~~~~~~~~~~~l~~L~-~~~~R~~gs~~~~~~~~~l~~~l~~~G------~~v~~~~~~~~~-~---------~g~~~~ 83 (314)
T 3gux_A 21 APEFDADSAYQYIQVQA-DFGPRVPNTQAHKECGEYLAGQLEKFG------AKVYNQYADLIA-Y---------DGTILK 83 (314)
T ss_dssp CCCCCHHHHHHHHHHHH-TTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEC-T---------TSCEEE
T ss_pred CCCCCHHHHHHHHHHHH-ccCCcCCCCHHHHHHHHHHHHHHHHCC------CEEEEEEeeccc-c---------CCCccc
Confidence 36899999999999999 799999999999999999999999998 566666543211 0 011245
Q ss_pred cceEEEEEeCCCCCCCCCEEEEeeecCCCCCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEE
Q 007484 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS-------------PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLF 194 (602)
Q Consensus 128 ~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~-------------pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf 194 (602)
..||+++++|+ +++.|+++||+|||+.+ +||.||++|||++||++|.|.+. +++++|+|++
T Consensus 84 ~~Nvia~~~g~----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~--~~~~~i~fv~ 157 (314)
T 3gux_A 84 SRNIIGAYKPE----SKKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKE--QPALGIDIVF 157 (314)
T ss_dssp EEEEEEEESTT----CSSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHS--CCSSEEEEEE
T ss_pred ceEEEEEECCC----CCceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhC--CCCCcEEEEE
Confidence 68999999985 34789999999999865 79999999999999999999986 4899999999
Q ss_pred eCcccCCc--------------cchHHHHhhcCc-cCceeEEEEeccCCCCCCceEEecCCC-C---Chhhhhhhhhccc
Q 007484 195 NGAEELFM--------------LGAHGFMKAHKW-RDSVGAVINVEASGTGGLDLVCQSGPS-S---WPSSVYAQSAIYP 255 (602)
Q Consensus 195 ~~aEE~gl--------------~GS~~f~~~h~~-~~~i~a~INLD~~G~gg~~~lfq~gp~-~---~~~~~y~~~~~~p 255 (602)
+++||.|+ .||+.|+++++. .++++++||+|++|..++.+ ++.++. . ++.+.+.+.+. .
T Consensus 158 ~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm~G~~~~~~-~~~g~~~~~~~~l~~~~~~~~~-~ 235 (314)
T 3gux_A 158 FDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDMVGGKDATF-YYEGYSARTARSEMKKIWKKAH-E 235 (314)
T ss_dssp ECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCE-EECTTHHHHCHHHHHHHHHHHH-H
T ss_pred ECCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEeccCCCCCce-eeeccccccHHHHHHHHHHHHH-H
Confidence 99999999 999999985543 37899999999999988764 444432 1 22222222111 1
Q ss_pred ccc-cccccccCCCCCCCchHHHhhcCCCCcEEEEEeecC-------CCcCCCcccccCCCCHHHHHHHHHHHHHHHHH
Q 007484 256 MAH-SAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIG-------GYYYHTSHDTVDRLLPGSVQARGDNLFNVLKA 326 (602)
Q Consensus 256 ~~~-~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~-------~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~ 326 (602)
.+. ...++..+ ....|||.+|.+ ..|||++++..... .++|||+.||+|+||+++++++++++++++.+
T Consensus 236 ~g~~~~f~~~~~-~~~~sDh~pF~~-~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~~y~ 312 (314)
T 3gux_A 236 LGYGKYFVKEDG-GETVDDHIYVNK-LARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVGQTVMDVIYN 312 (314)
T ss_dssp HTCTTTEEEEEC-CCCCCHHHHHHH-HSCCCEEEEEBCC--------------------CBCHHHHHHHHHHHHHHHHT
T ss_pred cCCccccccccC-CCCCCccHHHHh-cCCCceEEEecccccccccCCCCCCCCCcCcchhCCHHHHHHHHHHHHHHHhh
Confidence 110 00111011 123699999985 35999999976531 36899999999999999999999999999864
No 6
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=100.00 E-value=2e-35 Score=334.01 Aligned_cols=273 Identities=20% Similarity=0.181 Sum_probs=216.6
Q ss_pred ccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHh----cCCCCCCCEEEEEeCcccCCc
Q 007484 127 NHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTID----SGWIPPRPIIFLFNGAEELFM 202 (602)
Q Consensus 127 ~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~----~~~~p~~~I~flf~~aEE~gl 202 (602)
.+.||+++++|+. .++++|++++|+|||. +||.||++|+|++||++|.|.+ .+++|+|+|+|++|++||.|+
T Consensus 265 ~~~NVi~~i~G~~--~~~~~vvvgaH~Ds~~--~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~gl 340 (640)
T 3kas_A 265 KILNIFGVIKGFV--EPDHYVVVGAQRDAWG--PGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDFGS 340 (640)
T ss_dssp EEEEEEEEECCSS--EEEEEEEEEEECCCSS--CCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGGTS
T ss_pred eEEEEEEEEeCCc--CCCCceeeecccCCCC--CCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCcccCc
Confidence 5679999999973 3568999999999995 9999999999999999999986 378999999999999999999
Q ss_pred cchHHHHhhcC--ccCceeEEEEeccCCCCCCceEEecCCC-CChhhhhhhhhcccccc-ccccc-c----cCCCCCCCc
Q 007484 203 LGAHGFMKAHK--WRDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSVYAQSAIYPMAH-SAAQD-V----FPVIPGDTD 273 (602)
Q Consensus 203 ~GS~~f~~~h~--~~~~i~a~INLD~~G~gg~~~lfq~gp~-~~~~~~y~~~~~~p~~~-~~~~e-~----f~~ips~tD 273 (602)
.||++|+++|. +.++++++||+|++|.|++.+.++++|. .++++.+.+.+++|... ++.++ . .+.++++||
T Consensus 341 ~GS~~~~~~~~~~l~~~~~a~iNlD~~~~G~~~l~~~~~p~l~~l~~~~~~~v~~P~~~~tl~~~~~w~~~~~~~~~~sD 420 (640)
T 3kas_A 341 VGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLTLDNA 420 (640)
T ss_dssp HHHHHHHHHTTTTGGGTEEEEEECTTCBSCSSEEEEEECGGGHHHHHHHHTTCBCTTTCSBSCCCTTGGGGCCCCCTTST
T ss_pred hhHHHHHHhhhhhhhhCEEEEEecccCccCCCceEEEeCHHHHHHHHHHHHhCCCCCCCCceecccccccccCCCCCCcc
Confidence 99999999883 3589999999999999888888988875 23444555677888753 44442 2 256789999
Q ss_pred hHHHhhcCCCCcEEEEEeecC-CC-cCCCcccccCCCCH------HHHHHHHHHHHHHHHHHhCCcccc-cchhhh----
Q 007484 274 YRIFSQDYGDIPGLDIIFLIG-GY-YYHTSHDTVDRLLP------GSVQARGDNLFNVLKAFSNSSKLQ-NAHDRA---- 340 (602)
Q Consensus 274 ~~~F~~~~~GIPgld~a~~~~-~~-~YHT~~Dt~d~id~------~~lq~~g~~~l~l~~~la~a~~l~-~~~~~~---- 340 (602)
|.+|.+ +.|||++|+++..+ .| +|||.+||+|+++. ...+.+++.+..++.+|++++.+| +..+|.
T Consensus 421 ~~~F~~-~~GIP~~~~~~~~~~~y~~yHT~~Dt~~~i~~~~~~~~~~h~~~a~~~g~l~l~La~~~~lP~~~~~y~~~l~ 499 (640)
T 3kas_A 421 AFPFLA-YSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELNLDYERYNSQLL 499 (640)
T ss_dssp HHHHHH-HHCCCEEEEEEECSSCCTTTTSTTCCHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHSSSCCCCTTHHHHHHH
T ss_pred hHHHHH-hCCCCeeeccccCCCCCCCcCCccccHHHHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 999974 68999999999866 45 59999999998753 367788889999999999998887 444432
Q ss_pred ----hhhhhcCCCCCCCeeEccchhHhhhHccHHHHHHHHhhHHHHhhccceEEEEecccchhhhhhHHH
Q 007484 341 ----SFEATGIKNTDERAIFFDYLTWFMIYYSRSRATVLHGIPIVIFITVPFFLRLLNSGLHSWFATYSD 406 (602)
Q Consensus 341 ----~~~~~~~~~~~~~~V~fd~lg~~~v~y~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (602)
++++ .....+...+.|+.|..++..|.. ++..++..+......++..+|++|+|+|.+||.|++
T Consensus 500 ~~~~~l~~-~~~~~~~~~~~~~~l~~a~~~f~~-aa~~~~~~~~~~~~~~~~~~r~~N~~l~~~er~fl~ 567 (640)
T 3kas_A 500 SFVRDLNQ-YRADIKEMGLSLQWLYSARGDFFR-ATSRLTTDFGNAEKTDRFVMKKLNDRVMRVEYHFLS 567 (640)
T ss_dssp HHHHHHGG-GTTTTTTTTCCCHHHHHHHHHHHH-HHHHHHHHHHHSCTTCHHHHHHHHHHHHHHGGGGBC
T ss_pred HHHHHHHH-HHHhhhccCCChHHHHHHHHHHHH-HHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhhcC
Confidence 2222 223334457999999999999998 456666554433344556778899999999997653
No 7
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=100.00 E-value=3.4e-34 Score=301.03 Aligned_cols=255 Identities=19% Similarity=0.205 Sum_probs=189.5
Q ss_pred cCcccHHHHHH-HHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccccccccccccccc
Q 007484 48 LDRFSEARAIQ-HVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYR 126 (602)
Q Consensus 48 ~~~Fs~era~~-~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~ 126 (602)
+++|+.+|+++ +|+.+ +++|..||++++++++||++++++++. .+++++|....+.. ..+.
T Consensus 33 ~~~~~~~~~~~~~L~~~---~~~R~~gS~~~~~a~~~l~~~l~~~~~----g~~v~~d~f~~~~~-----------~g~~ 94 (330)
T 3pb6_X 33 VGQLDPQRLWSTYLRPL---LVVRTPGSPGNLQVRKFLEATLRSLTA----GWHVELDPFTASTP-----------LGPV 94 (330)
T ss_dssp HHTCCHHHHHHHTTGGG---CSCCCTTSHHHHHHHHHHHHHHHHSTT----CCEEEEEEEEEEET-----------TEEE
T ss_pred cccCCHHHHHHHHHHHH---hCCCCCCCHHHHHHHHHHHHHHHHhCC----CCeEEEEeeecccc-----------cCCc
Confidence 45799999988 67766 789999999999999999999999942 15677665432210 1134
Q ss_pred ccceEEEEEeCCCCCCCCCEEEEeeecCCCCC------CCCCCCChhHHHHHHHHHHHHHhc-----CCCCCCCEEEEEe
Q 007484 127 NHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS------SPGAGDCGSCVASMLELARLTIDS-----GWIPPRPIIFLFN 195 (602)
Q Consensus 127 ~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~------~pGA~D~~sGva~~LE~ar~L~~~-----~~~p~~~I~flf~ 195 (602)
+..|||++++|+. ++.|+++|||||++. .+||.||++|||++||++|.|.+. +.+|+++|.|+|+
T Consensus 95 ~~~Nvia~~~g~~----~~~ivl~aH~Dsv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~ 170 (330)
T 3pb6_X 95 DFGNVVATLDPRA----ARHLTLACHYDSKLFPPGSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFL 170 (330)
T ss_dssp EEEEEEEESCTTS----SEEEEEEEECCCCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEE
T ss_pred cceEEEEEECCCC----CceEEEEeccCCCCCCCCCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEE
Confidence 5689999999862 478999999999863 389999999999999999999863 3579999999999
Q ss_pred CcccC--------CccchHHHHhhcC---------ccCceeEEEEeccCCCCCCceEEecCCC-CChhhhhh---hhh--
Q 007484 196 GAEEL--------FMLGAHGFMKAHK---------WRDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSVYA---QSA-- 252 (602)
Q Consensus 196 ~aEE~--------gl~GS~~f~~~h~---------~~~~i~a~INLD~~G~gg~~~lfq~gp~-~~~~~~y~---~~~-- 252 (602)
++||. |+.||+.|+++.. ..++++++||+||+|+.++.+.. ..+. .+..+... +..
T Consensus 171 ~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDmiG~~~~~~~~-~~~~t~~~~~~l~~i~~~~~~ 249 (330)
T 3pb6_X 171 DGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAPNPTFYS-HFPRTVRWFHRLRSIEKRLHR 249 (330)
T ss_dssp SCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEESCSSSSCCBCC-CCGGGHHHHHHHHHHHHHHHH
T ss_pred cCcccccccCCCCCCccHHHHHHHHHhcCCccccchhhCeEEEEeccCCCCCCCCcee-ecCcchHHHHHHHHHHHHHHH
Confidence 99999 9999999997532 35799999999999998876421 1111 11111111 100
Q ss_pred -----cccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHHHH
Q 007484 253 -----IYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAF 327 (602)
Q Consensus 253 -----~~p~~~~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~l 327 (602)
.+|................|||.+|.+ .|||++++......++|||+.||+|+||+++++++++.+..++.+.
T Consensus 250 ~g~~~~~p~~~~~f~~~~~~~~~~SDH~pF~~--~GIP~~~~~~~~f~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~Ey 327 (330)
T 3pb6_X 250 LNLLQSHPQEVMYFQPGEPFGSVEDDHIPFLR--RGVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAVFLAEY 327 (330)
T ss_dssp TTCCSSCCSSCSSBCSSCSSCCCSCTTHHHHT--TTCCEEEEECSSCCTTTTSTTCSGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred cCccccCCcccccccccccCCCCCCchHhHHH--CCCCEEEEEcCCCCCCCCCCcCchhhCCHHHHHHHHHHHHHHHHHH
Confidence 011100010000011224799999986 7999999876555678999999999999999999999999987664
No 8
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=100.00 E-value=1.1e-32 Score=284.04 Aligned_cols=255 Identities=19% Similarity=0.303 Sum_probs=194.6
Q ss_pred CcccHHHHHHHHHHHHHhc-----CCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccc
Q 007484 49 DRFSEARAIQHVRVLADEI-----GDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISL 123 (602)
Q Consensus 49 ~~Fs~era~~~L~~La~~i-----g~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~ 123 (602)
.+.+.+++.++|++|++ + ++|..++++++++++||+++++++| ++++++.....+
T Consensus 2 ~~i~~~~~~~~l~~L~~-i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g------~~v~~~~~~~~~------------- 61 (284)
T 1tkj_A 2 PDIPLANVKAHLTQLST-IAANNGGNRAHGRPGYKASVDYVKAKLDAAG------YTTTLQQFTSGG------------- 61 (284)
T ss_dssp CCCCHHHHHHHHHHHHH-HHHTTTTCCCTTSHHHHHHHHHHHHHHHHHT------CEEEEEEEEETT-------------
T ss_pred CcCCHHHHHHHHHHHHc-ccccCCCCCCCCCHHHHHHHHHHHHHHHHcC------CeEEEEEeccCC-------------
Confidence 36788999999999984 3 3688888888999999999999998 566665432211
Q ss_pred cccccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCcc
Q 007484 124 GYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFML 203 (602)
Q Consensus 124 ~y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~ 203 (602)
.+..||+++++|++ +++.|++++|+|+|+.++|+.||++|++++||++|.|++.+++++++|+|+|+++||.|+.
T Consensus 62 --~~~~nvi~~~~g~~---~~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~ 136 (284)
T 1tkj_A 62 --ATGYNLIANWPGGD---PNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLI 136 (284)
T ss_dssp --EEEEEEEEECSCSE---EEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSH
T ss_pred --CCceeEEEEEeCCC---CCCEEEEEeecCCCCCCCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCCc
Confidence 23469999998852 3478999999999999999999999999999999999998888999999999999999999
Q ss_pred chHHHHhhcCc--cCceeEEEEeccCCCCCCceEEecCCCCChhhhhhhhhcccccccccccccCCCCCCCchHHHhhcC
Q 007484 204 GAHGFMKAHKW--RDSVGAVINVEASGTGGLDLVCQSGPSSWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFSQDY 281 (602)
Q Consensus 204 GS~~f~~~h~~--~~~i~a~INLD~~G~gg~~~lfq~gp~~~~~~~y~~~~~~p~~~~~~~e~f~~ips~tD~~~F~~~~ 281 (602)
||+.|+++++. .++++++||+|+.|.++..+....+ .+.+.+.+.+...+ .+ +..+.......+|||.+|.+
T Consensus 137 Gs~~~~~~~~~~~~~~~~~~i~~D~~g~~~~~~~~~~~-~~~l~~~~~~~~~~-~g--i~~~~~~~~~~~sD~~~f~~-- 210 (284)
T 1tkj_A 137 GSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVYDD-DPVIEKTFKNYFAG-LN--VPTEIETEGDGRSDHAPFKN-- 210 (284)
T ss_dssp HHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEECCS-SHHHHHHHHHHHHH-HT--CCCEECCSSTTCSTHHHHHH--
T ss_pred CHHHHHhhCccchhhcEEEEEEecCCCCCCCCeEEecC-CHHHHHHHHHHHHH-cC--CCcccCCCCCCCCchHHHHH--
Confidence 99999998763 4789999999999987654444322 22333333221111 00 00011111235799999985
Q ss_pred CCCcEEEEEeec-------------------CCCcCCCcccccCCCCHHHHHHHHHHHHHHHHHHhCCcccc
Q 007484 282 GDIPGLDIIFLI-------------------GGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSSKLQ 334 (602)
Q Consensus 282 ~GIPgld~a~~~-------------------~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~a~~l~ 334 (602)
.|||++.+.... ..++|||+.||++++|++.++++++.+..+++.+++++.+|
T Consensus 211 ~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id~~~l~~~~~~~~~~~~~la~~~~~P 282 (284)
T 1tkj_A 211 VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSSGTGEP 282 (284)
T ss_dssp TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC-----
T ss_pred CCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 799999987541 13589999999999999999999999999999999988766
No 9
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=100.00 E-value=5.9e-33 Score=292.00 Aligned_cols=252 Identities=19% Similarity=0.213 Sum_probs=187.0
Q ss_pred cCcccHHHH-HHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhc--ccccCCCceeEEEEeeeecCcccccccccccccc
Q 007484 48 LDRFSEARA-IQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEG--IKERAGPKFRIEIEENVVNGSFNMIFLGHSISLG 124 (602)
Q Consensus 48 ~~~Fs~era-~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~--ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~ 124 (602)
+.+++.+|+ .++|++| +++|..+|++++++++||.+++++ .| ++++++...... ...
T Consensus 25 ~~~~~~~~~~~~~l~~L---~~~r~~~s~~~~~~~~~l~~~l~~~~~G------~~v~~~~~~~~~-----------~~g 84 (329)
T 2afw_A 25 AEGTSISEMWQNDLQPL---LIERYPGSPGSYAARQHIMQRIQRLQAD------WVLEIDTFLSQT-----------PYG 84 (329)
T ss_dssp HHHCCHHHHHHHTTGGG---CSCCCTTSHHHHHHHHHHHHHHHTSSSC------CEEEEEEEEECC-----------TTS
T ss_pred hhhcCHHHHHHHHHHHH---cCCCCCCCHHHHHHHHHHHHHHHhhCCC------CEEEEEEEEecC-----------CCC
Confidence 457999999 8999988 679999999999999999999999 66 567766543321 011
Q ss_pred ccccceEEEEEeCCCCCCCCCEEEEeeecCCCCCC-------CCCCCChhHHHHHHHHHHHHHhc--------CCCCCCC
Q 007484 125 YRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS-------PGAGDCGSCVASMLELARLTIDS--------GWIPPRP 189 (602)
Q Consensus 125 y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~-------pGA~D~~sGva~~LE~ar~L~~~--------~~~p~~~ 189 (602)
+.+..||+++++|+ +++.|+++||+||++.+ +||.||++|||++||++|.|++. +++|+++
T Consensus 85 ~~~~~Nvi~~~~g~----~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~ 160 (329)
T 2afw_A 85 YRSFSNIISTLNPT----AKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLS 160 (329)
T ss_dssp SEEEEEEEEESSTT----SSEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEE
T ss_pred CceEeEEEEEECCC----CCcEEEEEEeccCCCcCcccCcCCCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCcc
Confidence 24568999999885 35789999999999865 89999999999999999999875 4689999
Q ss_pred EEEEEeCcccC--------CccchHHHHhhcC------------ccCceeEEEEeccCCCCCCceE--EecCCCCChhhh
Q 007484 190 IIFLFNGAEEL--------FMLGAHGFMKAHK------------WRDSVGAVINVEASGTGGLDLV--CQSGPSSWPSSV 247 (602)
Q Consensus 190 I~flf~~aEE~--------gl~GS~~f~~~h~------------~~~~i~a~INLD~~G~gg~~~l--fq~gp~~~~~~~ 247 (602)
|+|+++++||. |+.||+.|++++. ..++++++||+|++|.+++.+. +..+. + ..+.
T Consensus 161 i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~~inlD~iG~~~~~~~~~~~~~~-~-~~~~ 238 (329)
T 2afw_A 161 LQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSA-R-WFER 238 (329)
T ss_dssp EEEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSSSCCBCCCCGGGH-H-HHHH
T ss_pred EEEEEecCcccccccCCCccchhHHHHHHHHHhCCCcccccccccccceEEEEEeccCCCCCCceeeeccCcc-h-HHHH
Confidence 99999999998 9999999998652 1467999999999998876542 21111 1 1110
Q ss_pred h---hhhhccc-c--cccccccccCC----CCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHH
Q 007484 248 Y---AQSAIYP-M--AHSAAQDVFPV----IPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARG 317 (602)
Q Consensus 248 y---~~~~~~p-~--~~~~~~e~f~~----ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g 317 (602)
. .+..... . ........|.. ....|||.+|.+ .|||++++......+.|||++||+|++|++++++++
T Consensus 239 l~~~~~~~~~~g~~~~~~~~~~~f~~~~~~g~~~sDh~~F~~--~GiP~~~~~~~~~~~~yHt~~Dt~~~ld~~~l~~~~ 316 (329)
T 2afw_A 239 LQAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIPFLR--RGVPVLHLIPSPFPEVWHTMDDNEENLDESTIDNLN 316 (329)
T ss_dssp HHHHHHHHHHTTCSSSCCSTTCSBCSCCCCSCCCSTTHHHHT--TTCCEEEECCSSCCTTTTSTTCSSTTCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCccCCCcccccccccccCCCCCCCCHhHHH--CCCCEEEEEcCCCCCCCCCCCCchhhCCHHHHHHHH
Confidence 0 0100000 0 00001111211 123699999986 699999998766667999999999999999999999
Q ss_pred HHHHHHHHHH
Q 007484 318 DNLFNVLKAF 327 (602)
Q Consensus 318 ~~~l~l~~~l 327 (602)
+.+..++.+.
T Consensus 317 ~~~~~~v~ey 326 (329)
T 2afw_A 317 KILQVFVLEY 326 (329)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9888877653
No 10
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=100.00 E-value=3.2e-34 Score=327.03 Aligned_cols=274 Identities=22% Similarity=0.238 Sum_probs=211.2
Q ss_pred cccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHh---cCCCCCCCEEEEEeCcccCCc
Q 007484 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTID---SGWIPPRPIIFLFNGAEELFM 202 (602)
Q Consensus 126 ~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~---~~~~p~~~I~flf~~aEE~gl 202 (602)
..+.||+++++|+. +++++|++++|+|||+ +||.||++|+|++||++|.|.+ .|++|+|+|+|++|++||.|+
T Consensus 310 ~~~~NVi~~i~G~~--~~~~~vllgaH~Ds~~--~Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~Gl 385 (707)
T 3fed_A 310 TRIYNVVGTIRGSV--EPDRYVILGGHRDSWV--FGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEFGL 385 (707)
T ss_dssp EEEEEEEEEECCSS--EEEEEEEEEEECCCSS--SCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTS
T ss_pred EEEEEEEEEEeCCC--CCCceEEEeccccCCC--CCCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCccccc
Confidence 45789999999974 3578999999999998 7999999999999999999975 578999999999999999999
Q ss_pred cchHHHHhhcC--ccCceeEEEEeccCCCCCCceEEecCCC-CChhhhhhhhhccccc----cccccccc----------
Q 007484 203 LGAHGFMKAHK--WRDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSVYAQSAIYPMA----HSAAQDVF---------- 265 (602)
Q Consensus 203 ~GS~~f~~~h~--~~~~i~a~INLD~~G~gg~~~lfq~gp~-~~~~~~y~~~~~~p~~----~~~~~e~f---------- 265 (602)
.||+.|+++|+ +.+++.++||+|++|.|+..+.++++|. .+++..+.+.+++|.+ .++.+.++
T Consensus 386 ~GS~~~~~~~~~~~~~~~~a~iNlD~~~~g~~~~~~~~sp~l~~~i~~~~~~v~~P~~~~~~~tly~~w~~~~~~~~~~~ 465 (707)
T 3fed_A 386 LGSTEWAEENVKILQERSIAYINSDSSIEGNYTLRVDCTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPENKN 465 (707)
T ss_dssp HHHHHHHHHHHHHHHHHEEEEEECSCSBSCSSEEEEEECGGGHHHHHHHHTTSBCCSTTCTTSBHHHHHHHHSEETTEEE
T ss_pred hhHHHHHHhcchhhhhCEEEEEEecccccCCceEEEecCHHHHHHHHHHHhcCCCCccccccccHHHHHHhhcccccccC
Confidence 99999999885 5689999999999999988899998875 3445555677788865 33332211
Q ss_pred ----CCCCCCCchHHHhhcCCCCcEEEEEeecC-------CC-cCCCcccccCCC----CHH--HHHHHHHHHHHHHHHH
Q 007484 266 ----PVIPGDTDYRIFSQDYGDIPGLDIIFLIG-------GY-YYHTSHDTVDRL----LPG--SVQARGDNLFNVLKAF 327 (602)
Q Consensus 266 ----~~ips~tD~~~F~~~~~GIPgld~a~~~~-------~~-~YHT~~Dt~d~i----d~~--~lq~~g~~~l~l~~~l 327 (602)
+...++|||.+|. ++.|||++++++..+ .| .|||.+||++++ ||+ ..+.+++.+..++.+|
T Consensus 466 ~p~i~~lgsgSD~~~F~-~~~GIPs~~~~f~~~~~~~~~~~y~~YHT~~Dt~~~~~~~~Dp~f~~h~~~a~~~g~l~l~L 544 (707)
T 3fed_A 466 LPRINKLGSGSDFEAYF-QRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVYEL 544 (707)
T ss_dssp EECEECCCSSSTTHHHH-HTTCCCEEEEEEECCTTTCCSSSCTTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCCCCChHHHH-HhCCcceeccccccCccccccCCCCCcCCCcccHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 2345799999998 479999999999854 34 799999999976 444 5566788888899999
Q ss_pred hCCcccc-cchhhhh--------h---hhhcCCCCCCCeeEccchhHhhhHccHHHHHHHHhhHHHHhhccceEEEEecc
Q 007484 328 SNSSKLQ-NAHDRAS--------F---EATGIKNTDERAIFFDYLTWFMIYYSRSRATVLHGIPIVIFITVPFFLRLLNS 395 (602)
Q Consensus 328 a~a~~l~-~~~~~~~--------~---~~~~~~~~~~~~V~fd~lg~~~v~y~~~~a~~l~~~~~~~~~~~~~~~~~~~~ 395 (602)
++++.+| +..++.. + +...+...++..+.|+.|..++..|.. .+..++.....+....+..+|++|+
T Consensus 545 a~~~vlP~~~~~ya~~l~~~~~~l~~~~~~~~~~l~~~~~~~~~L~~a~~~~~~-~a~~~~~~~~~~~~~~~~~~r~~N~ 623 (707)
T 3fed_A 545 VDSKIIPFNIQDYAEALKNYAASIYNLSKKHDQQLTDHGVSFDSLFSAVKNFSE-AASDFHKRLIQVDLNNPIAVRMMND 623 (707)
T ss_dssp HHCSSCCCCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHTCCCHHHHHHHHHHHH-HHHHHHHHHTTCCTTCHHHHHHHHH
T ss_pred hCCccCCCCHHHHHHHHHHHHHHHHHHHHhhcchhhhcCcCHHHHHHHHHHHHH-HHHHHHHHHHhhhcCCHHHHHHHHH
Confidence 9988877 4433321 1 111111123346889999999999977 5666665433232335567788999
Q ss_pred cchhhhhhHH
Q 007484 396 GLHSWFATYS 405 (602)
Q Consensus 396 ~~~~~~~~~~ 405 (602)
++|.+||.|+
T Consensus 624 ~l~~~Er~fl 633 (707)
T 3fed_A 624 QLMLLERAFI 633 (707)
T ss_dssp HHHHHHHHTB
T ss_pred HHHHHHHHhc
Confidence 9999999764
No 11
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.98 E-value=2.3e-31 Score=275.98 Aligned_cols=264 Identities=17% Similarity=0.198 Sum_probs=194.1
Q ss_pred cCcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccc
Q 007484 48 LDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRN 127 (602)
Q Consensus 48 ~~~Fs~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~ 127 (602)
..+++.+++.++|++|+ ++++|..+|+++.++++||.++++++|.... .++++....++ .+
T Consensus 14 ~~~~~~~~~~~~l~~L~-~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~---~~~~~~~~~~~---------------~~ 74 (299)
T 1rtq_A 14 LPQVDASQITGTISSLE-SFTNRFYTTTSGAQASDWIASEWQALSASLP---NASVKQVSHSG---------------YN 74 (299)
T ss_dssp GGGCCHHHHHHHHHHHH-TSSCCCTTSHHHHHHHHHHHHHHHHHHTTST---TEEEEEEEETT---------------EE
T ss_pred HHhcCHHHHHHHHHHHh-CcCCCCCCCchHHHHHHHHHHHHHHhcCCcc---cceeeeeccCC---------------CC
Confidence 45789999999999999 7999999999888999999999999874321 14444322111 23
Q ss_pred cceEEEEEeCCCCCCCCCEEEEeeecCCCCC--------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCccc
Q 007484 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLS--------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEE 199 (602)
Q Consensus 128 ~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~--------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE 199 (602)
..||+++++|++ .+++.|++++|+|+|+. ++||.||++|++++||++|.|++.+++++++|+|+++++||
T Consensus 75 ~~nvi~~~~g~~--~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE 152 (299)
T 1rtq_A 75 QKSVVMTITGSE--APDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEE 152 (299)
T ss_dssp EEEEEEEECCSS--EEEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGG
T ss_pred CceEEEEEECCC--CCCCEEEEEeccccCCCcCcCCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCcc
Confidence 469999999853 13578999999999873 69999999999999999999999888899999999999999
Q ss_pred CCccchHHHHhhcCc-cCceeEEEEeccCCCCC--CceEEecCCC-CChhhhhhhhhcccccccccccccCCCCCCCchH
Q 007484 200 LFMLGAHGFMKAHKW-RDSVGAVINVEASGTGG--LDLVCQSGPS-SWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYR 275 (602)
Q Consensus 200 ~gl~GS~~f~~~h~~-~~~i~a~INLD~~G~gg--~~~lfq~gp~-~~~~~~y~~~~~~p~~~~~~~e~f~~ips~tD~~ 275 (602)
.|+.||+.++++++. .++++++||+|+.|..| +.+.+...+. +.+.+...+.+. .+...+..+......++|||.
T Consensus 153 ~g~~Gs~~~~~~~~~~~~~~~~~i~~D~~g~~g~~~~i~~~~~~~~~~l~~~l~~~a~-~~~~~i~~~~~~~~~~~sD~~ 231 (299)
T 1rtq_A 153 VGLRGSQDLANQYKSEGKNVVSALQLDMTNYKGSAQDVVFITDYTDSNFTQYLTQLMD-EYLPSLTYGFDTCGYACSDHA 231 (299)
T ss_dssp GTSHHHHHHHHHHHHTTCEEEEEEECSCCSCCCSSSSEEEECTTSCHHHHHHHHHHHH-HHCTTCCEEEECCSSCCSTHH
T ss_pred CCchhHHHHHHhhhhccccEEEEEEecCCCCCCCCcceEEEeCCCCchHHHHHHHHHH-HhCccCCcccCCCCCCCCcHH
Confidence 999999999997753 47899999999998643 3344443222 111111111110 000011011101112579999
Q ss_pred HHhhcCCCCcEEEEEe---ecCCCcCCCcccccCCCCH--HHHHHHHHHHHHHHHHHhCCccccc
Q 007484 276 IFSQDYGDIPGLDIIF---LIGGYYYHTSHDTVDRLLP--GSVQARGDNLFNVLKAFSNSSKLQN 335 (602)
Q Consensus 276 ~F~~~~~GIPgld~a~---~~~~~~YHT~~Dt~d~id~--~~lq~~g~~~l~l~~~la~a~~l~~ 335 (602)
+|.+ .|||++.+.. .....+|||+.||++++|+ ..++++++.+.+++.+|++++.+.+
T Consensus 232 ~f~~--~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l~~~~~~~La~~~~~~~ 294 (299)
T 1rtq_A 232 SWHN--AGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIEMGSATGDTP 294 (299)
T ss_dssp HHHH--TTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHHHHHHHHHHHHCCC---
T ss_pred HHHH--CCCCEEEecccccccCCCCCCCccccccccCccHHHHHHHHHHHHHHHHHHhCCCcCCC
Confidence 9986 7999986532 1233589999999999998 5889999999999999999887654
No 12
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.96 E-value=3.4e-28 Score=265.58 Aligned_cols=200 Identities=21% Similarity=0.215 Sum_probs=157.0
Q ss_pred cccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccch
Q 007484 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGA 205 (602)
Q Consensus 126 ~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS 205 (602)
....||+++++|++ .+++.|++++|+|||+.+|||.||++|++++||++|.|++.+++|+|+|+|++|++||.|+.||
T Consensus 233 ~~~~Nvi~~~~g~~--~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs 310 (444)
T 3iib_A 233 TTSYNVIAEVKGST--KADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGG 310 (444)
T ss_dssp EEEEEEEEEECCST--EEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHH
T ss_pred ceeEEEEEEEeCCC--CCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCH
Confidence 45679999999974 2467899999999999999999999999999999999999888999999999999999999999
Q ss_pred HHHHhhcCc-cCceeEEEEeccCCCCCCceEEecCCC-CChhhhhhhhhcccccccccccccCCCCCCCchHHHhhcCCC
Q 007484 206 HGFMKAHKW-RDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFSQDYGD 283 (602)
Q Consensus 206 ~~f~~~h~~-~~~i~a~INLD~~G~gg~~~lfq~gp~-~~~~~~y~~~~~~p~~~~~~~e~f~~ips~tD~~~F~~~~~G 283 (602)
+.|+++|+. .+++.+++|+|+.|.....+.++.++. ..+.+.+.+.. .+.+... + +....++|||.+|.+ .|
T Consensus 311 ~~~~~~~~~~~~~~~~~~n~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~--~-~~~~~~~SD~~~f~~--~G 384 (444)
T 3iib_A 311 KTYAKEHEAELEKHYIAAESDFGAGPIYQIDWRVADTAHSPVINAMKVA-EPLGVAA--G-NNKASGGPDVSMLPA--LG 384 (444)
T ss_dssp HHHHHHTGGGGGGEEEEEECCSTTCCEEEEEEECCHHHHHHHHHHGGGG-GGGTCEE--C-CSCCCCCGGGTTSGG--GT
T ss_pred HHHHHhhHhhhhceeEEEECcCCCCcceEEEeecChhhHHHHHHHHHHH-hhcCCcc--c-cCCCCCCCccHHHHH--CC
Confidence 999998843 368999999998664433333343322 12233332221 1221111 0 223456899999986 69
Q ss_pred CcEEEEEeecCC--CcCCCcccccCCCCHHHHHHHHHHHHHHHHHHhCCccc
Q 007484 284 IPGLDIIFLIGG--YYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSSKL 333 (602)
Q Consensus 284 IPgld~a~~~~~--~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~a~~l 333 (602)
||++++...... .+|||+.||+|++|++.+++.++.+..+++.++++++.
T Consensus 385 iP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~~~ 436 (444)
T 3iib_A 385 VPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSKVE 436 (444)
T ss_dssp CCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999998764332 38999999999999999999999999999999998764
No 13
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.95 E-value=3.5e-27 Score=255.82 Aligned_cols=205 Identities=20% Similarity=0.227 Sum_probs=156.5
Q ss_pred ccceEEEEEeCCCC-CCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccch
Q 007484 127 NHTNIVMRISSTDS-QDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGA 205 (602)
Q Consensus 127 ~~~NVi~~i~g~~~-~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS 205 (602)
...||+++++|+++ ..+++.|++++|+|||+.+|||.||++|++++||++|.|++. +++|+|+|++|++||.|+.||
T Consensus 202 ~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~Ga~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs 279 (421)
T 2ek8_A 202 TSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGS 279 (421)
T ss_dssp EEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCCCTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHH
T ss_pred cccceEEEecCcccCCCCCCEEEEecccccCCCCCCCCCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhH
Confidence 45799999999643 235789999999999999999999999999999999999874 678999999999999999999
Q ss_pred HHHHhhcC--ccCceeEEEEeccCCCCCC-ceEEecCCC-CChhhhhhhhhcccccccccccccCCCCCCCchHHHhhcC
Q 007484 206 HGFMKAHK--WRDSVGAVINVEASGTGGL-DLVCQSGPS-SWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFSQDY 281 (602)
Q Consensus 206 ~~f~~~h~--~~~~i~a~INLD~~G~gg~-~~lfq~gp~-~~~~~~y~~~~~~p~~~~~~~e~f~~ips~tD~~~F~~~~ 281 (602)
+.|+++++ +.+++.++||+|++|.++. ......+.+ ......+.+....+.+.. + .....++|||.+|.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~in~D~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~--~~~~~~~SD~~~F~~-- 353 (421)
T 2ek8_A 280 KKYAASLSEDEIKRTIGMFQLDMVGSKDAGDLIMYTIDGKKNRVTDLGAAASSRLSGV--L--PYGQEGRSDHESFHA-- 353 (421)
T ss_dssp HHHHTTCCHHHHHHEEEEEEECSCCBTTSCEEEEEETTSCCCHHHHHHHHHHHHHTSC--C--CEEECCSSTHHHHHT--
T ss_pred HHHHHhCccchhhcEEEEEEecccCCCCCcceEEecCCCccccchhhHHHHHHhcCCC--C--CCCCCCCCccHHHHH--
Confidence 99999874 3578999999999998775 333332222 112111111111111110 0 001135899999985
Q ss_pred CCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHHHHhCCcccc-cchhh
Q 007484 282 GDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSSKLQ-NAHDR 339 (602)
Q Consensus 282 ~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~a~~l~-~~~~~ 339 (602)
.|||++.+......++|||++||+|++|++.++++++.+..++..+++.+.++ +..+|
T Consensus 354 ~GIP~~~~~~~~~~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~la~~~~~p~~~~~y 412 (421)
T 2ek8_A 354 LGIPAALFIHAPVEPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAARPGELVIEPIDY 412 (421)
T ss_dssp TTCCEEEEEEESCCTTTTSTTCCGGGBCHHHHHHHHHHHHHHHHHHHSSSCCCCCCCCC
T ss_pred CCCCEEEEECCcCCCCCCCcccchhhCCHHHHHHHHHHHHHHHHHHhCCCccCCChhhh
Confidence 79999987644444689999999999999999999999999999999988776 44444
No 14
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.86 E-value=1.7e-20 Score=198.95 Aligned_cols=199 Identities=15% Similarity=0.127 Sum_probs=145.2
Q ss_pred ceeEEEEeeeecCccccccccccccccccccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHH
Q 007484 98 KFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELAR 177 (602)
Q Consensus 98 ~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar 177 (602)
++++.+|.....|... ..++ .++|+ .++.|+++||+|| | .+|+||+||+|+++|++|
T Consensus 153 ~y~V~IdS~l~~G~l~--------------y~e~--~ipG~----t~~~IllsaH~cH-P--~~ANDNaSG~a~lleLar 209 (435)
T 3k9t_A 153 DYEVVIDSSLEDGSLT--------------YGEY--YIRGE----LEEEILLTTYTCH-P--SMCNDNLSGVALITFIAK 209 (435)
T ss_dssp EEEEEEEEEEESCEEE--------------EEEE--EECCS----SSCEEEEEEECCC-C--SCTTTTHHHHHHHHHHHH
T ss_pred cEEEEEeeeecCCceE--------------EEEE--EecCC----CCCEEEEEEEcCC-C--CCCCccchHHHHHHHHHH
Confidence 3788888766655311 1122 25885 3578999999998 3 269999999999999999
Q ss_pred HHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCc-cCceeEEEEeccCCCCCCceEEecCCC-CChhhhhhh-hhcc
Q 007484 178 LTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKW-RDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSVYAQ-SAIY 254 (602)
Q Consensus 178 ~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~-~~~i~a~INLD~~G~gg~~~lfq~gp~-~~~~~~y~~-~~~~ 254 (602)
.|++. +++++++|+|++ |..||..|+++|+. .+++++.+|+||+|.++. ..+..++. +...+...+ ...+
T Consensus 210 ~l~~~--~~~~t~rFvf~p----g~iGS~~yl~~~~~~l~~i~a~lnLDmVGd~~~-~~y~~sr~g~~~~d~~~~~vl~~ 282 (435)
T 3k9t_A 210 ALSKL--KTKYSYRFLFAP----ETIGSITWLSRNEDKLKNIKMGLVATCVGDAGI-KNYKRTKFGDAEIDKIVEKVLMH 282 (435)
T ss_dssp HHTTS--CCSSEEEEEEEC----TTHHHHHHHHHCGGGGGGEEEEEECCSCCSSSC-EEEECCTTSSSHHHHHHHHHHHH
T ss_pred HHhcC--CCCceEEEEEcC----ccHHHHHHHHhChHhhhceEEEEEEEEecCCCC-ceeecCCCCChHHHHHHHHHHhh
Confidence 99863 688999999998 68999999998853 479999999999998764 34444432 333322111 1111
Q ss_pred cccccccccccCCCCCCCchHHHhhcCCC--CcEEEEEeecCC-CcCCCcccccCCCCHHHHHHHHHHHHHHHHHHhCCc
Q 007484 255 PMAHSAAQDVFPVIPGDTDYRIFSQDYGD--IPGLDIIFLIGG-YYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSS 331 (602)
Q Consensus 255 p~~~~~~~e~f~~ips~tD~~~F~~~~~G--IPgld~a~~~~~-~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~a~ 331 (602)
. . ..-......|.+|||++|.+ .| ||...+.....+ +.|||+.||+|+|+++.++...+.+.+.++.|.+..
T Consensus 283 ~-~--~~~~~~~f~~~GSDh~qF~s--pG~dIPv~~~~r~~~~~peYHTs~Dtld~ISpe~L~~s~~iv~~~i~~Le~n~ 357 (435)
T 3k9t_A 283 C-G--SEYYVADFFPWGSDERQFSS--PGINLSVGSLMRSCYGFDGYHTSADNLCYMNKDGLADSYKTYLEVIYTIENNR 357 (435)
T ss_dssp S-S--SCEEEECCCSCSSTHHHHTS--TTTCCCEEEEESSCTTCTTTTBTTSSGGGCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred c-C--CCCceecCCCCCCcchhHhh--CCCCCCEEEEecCCCCCcccCCCcCChhhCCHHHHHHHHHHHHHHHHHhhccc
Confidence 0 0 00011123446899999986 68 999988764443 479999999999999999999999999999997653
No 15
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.74 E-value=6.1e-17 Score=165.00 Aligned_cols=232 Identities=16% Similarity=0.149 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEE
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~ 133 (602)
+++.+.+++|. + .+..|..++++.+||.++|+++| ++++... . .+..|+++
T Consensus 6 ~~~~~~l~~lv-~---ips~s~~e~~~~~~l~~~l~~~G------~~~~~~~--~-----------------~~~~nv~a 56 (269)
T 4h2k_A 6 EKVVSLAQDLI-R---RPSISPNDEGCQQIIAERLEKLG------FQIEWMP--F-----------------NDTLNLWA 56 (269)
T ss_dssp HHHHHHHHHHH-T---SCCBTTCCTTHHHHHHHHHHTTT------CEEEECC--B-----------------TTBCEEEE
T ss_pred HHHHHHHHHHh-C---CCCCCCCcHHHHHHHHHHHHHcC------CeEEEEE--c-----------------CCceEEEE
Confidence 45667777776 3 33455555678999999999998 5554321 1 12459999
Q ss_pred EEeCCCCCCCCCEEEEeeecCCCCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 007484 134 RISSTDSQDTDPSVLMNGHFDGPLSS---------------------PGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (602)
Q Consensus 134 ~i~g~~~~~~~~~vll~aH~Dsv~~~---------------------pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~f 192 (602)
++ |+ +.+.|++.+|+|+||.+ +|+.||++|++++++++|.|.+.+.+++++|+|
T Consensus 57 ~~-g~----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~ 131 (269)
T 4h2k_A 57 KH-GT----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIAL 131 (269)
T ss_dssp EE-CS----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEE
T ss_pred Ee-CC----CCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEE
Confidence 98 53 24679999999999853 599999999999999999998877778899999
Q ss_pred EEeCcccCCcc-chHHHHhhcC-ccCceeEEEEeccCCCC--CCceE-EecCCC-----CChhhhhhhhhcccccccccc
Q 007484 193 LFNGAEELFML-GAHGFMKAHK-WRDSVGAVINVEASGTG--GLDLV-CQSGPS-----SWPSSVYAQSAIYPMAHSAAQ 262 (602)
Q Consensus 193 lf~~aEE~gl~-GS~~f~~~h~-~~~~i~a~INLD~~G~g--g~~~l-fq~gp~-----~~~~~~y~~~~~~p~~~~~~~ 262 (602)
+|+.+||.|.. |++.++++.. ...+..++|+.|..+.. +..+. -+.|.+ ..+.+...+.+..-.+ +..
T Consensus 132 ~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~Ept~~~~~~~~i~~g~~G~G~~~~~~~l~~~l~~aa~~~~g--i~~ 209 (269)
T 4h2k_A 132 LITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGGGFLTKPGKLLDSITSAIEETIG--ITP 209 (269)
T ss_dssp EEESCSSSCCTTSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEECSCTTCC------HHHHHHHHHHHHHHS--CCC
T ss_pred EEEeccccCcccCHHHHHHHHHhcCCCCCEEEEECCCCCCcCCceeEEecccccccCCCcHHHHHHHHHHHHHhC--CCC
Confidence 99999999985 9999987542 23578899999976432 11111 011111 1122221111110000 000
Q ss_pred cccCCCCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHHHHhC
Q 007484 263 DVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (602)
Q Consensus 263 e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (602)
.. ....++||.+.+.+ .|+|.+.+.... .++||+.+ +++.+.+++..+.+.++++.+.+
T Consensus 210 ~~-~~~gggtDa~~~~~--~g~p~~~~~~~~--~~~Hs~~E---~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 210 KA-ETGGGTSDGRFIAL--MGAEVVEFGPLN--STIHKVNE---CVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp EE-ECC--CHHHHHHHT--TTCEEEECCSBC--TTTTSTTC---EEEHHHHHHHHHHHHHHHHHHC-
T ss_pred EE-ecCCCCchHHHHHh--hCCCEEEEEeCC--CCCcCCcc---cccHHHHHHHHHHHHHHHHHHhh
Confidence 00 11235899998864 699998764433 34699985 67899999999999999988754
No 16
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.71 E-value=8.1e-17 Score=163.89 Aligned_cols=232 Identities=17% Similarity=0.116 Sum_probs=156.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEE
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~ 133 (602)
+++.+.+++|. ++. ..|..++++++||.++|+++| ++++..+ . .+..|+++
T Consensus 6 ~~~~~~l~~lv-~ip---s~s~~e~~~~~~l~~~l~~~G------~~~~~~~--~-----------------~~~~nv~a 56 (268)
T 3t68_A 6 SPVLALAKELI-SRQ---SVTPADAGCQDLMIERLKALG------FEIESMV--F-----------------EDTTNFWA 56 (268)
T ss_dssp CHHHHHHHHHH-TSC---CBTTCCTTHHHHHHHHHHHTT------CEECCCE--E-----------------TTEEC-CE
T ss_pred HHHHHHHHHHh-CCC---CCCCCchHHHHHHHHHHHHCC------CeEEEEe--c-----------------CCccEEEE
Confidence 45778888888 333 344445578999999999998 4333221 1 12359999
Q ss_pred EEeCCCCCCCCCEEEEeeecCCCCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 007484 134 RISSTDSQDTDPSVLMNGHFDGPLSS---------------------PGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (602)
Q Consensus 134 ~i~g~~~~~~~~~vll~aH~Dsv~~~---------------------pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~f 192 (602)
++ |+ +.+.|++.+|+|+||.+ +|+.||++|++++++++|.|++.+.+++++|+|
T Consensus 57 ~~-g~----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~ 131 (268)
T 3t68_A 57 RR-GT----QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGF 131 (268)
T ss_dssp EE-CS----SSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEE
T ss_pred Ee-CC----CCCeEEEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEE
Confidence 98 53 24679999999999853 599999999999999999998877778899999
Q ss_pred EEeCcccCCc-cchHHHHhhcC-ccCceeEEEEeccCCCC--CCceE-EecC-C----CCChhhhhhhhhcccccccccc
Q 007484 193 LFNGAEELFM-LGAHGFMKAHK-WRDSVGAVINVEASGTG--GLDLV-CQSG-P----SSWPSSVYAQSAIYPMAHSAAQ 262 (602)
Q Consensus 193 lf~~aEE~gl-~GS~~f~~~h~-~~~~i~a~INLD~~G~g--g~~~l-fq~g-p----~~~~~~~y~~~~~~p~~~~~~~ 262 (602)
+|+.+||.|. .|++.++++.. ...+..++|+.|..+.. +..+. -+.| | .+.+.+...+.+..-.+-. .
T Consensus 132 ~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~ept~~~~~~~~i~~g~~G~p~~~~~~~l~~~l~~a~~~~~gi~--~ 209 (268)
T 3t68_A 132 LITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGGGFLTDTGELLAAVVAAVEEVNHQA--P 209 (268)
T ss_dssp EEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEECSCCBSSSTTSEEEECCGGGGTSCCCCHHHHHHHHHHHHHHSSC--C
T ss_pred EEEeCCccCcccCHHHHHHHHHhcCCCCCEEEEeCCCCCccCCceeEEecCCCcccCCchHHHHHHHHHHHHHhCCC--c
Confidence 9999999998 49999987542 24678899999986532 11111 1111 1 1112222221111000000 0
Q ss_pred cccCCCCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHHHHhC
Q 007484 263 DVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (602)
Q Consensus 263 e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (602)
. .....++||+..|.+ .|+|++.+... ...+||+.+ +++.+.+++..+.+.++++.+.+
T Consensus 210 ~-~~~sgggtD~~~~~~--~g~p~~~~~~~--~~~~Hs~~E---~v~~~d~~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 210 A-LLTTGGTSDGRFIAQ--MGAQVVELGPV--NATIHKVNE---CVRIADLEKLTDMYQKTLNHLLG 268 (268)
T ss_dssp E-EESSCCCHHHHHHHH--HTCEEEECCSB--CTTTTSTTC---EEEHHHHHHHHHHHHHHHHHHHC
T ss_pred E-EecCccccHHHHHHh--cCCCEEEEeeC--CCCCCCccc---cccHHHHHHHHHHHHHHHHHHhC
Confidence 0 011235899999975 68998876432 235699985 66788999999999999988753
No 17
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.64 E-value=3e-15 Score=145.66 Aligned_cols=146 Identities=21% Similarity=0.211 Sum_probs=112.7
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccc
Q 007484 50 RFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHT 129 (602)
Q Consensus 50 ~Fs~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~ 129 (602)
.++.+++.+.+++|. ++.+ +.++++++++++|+.++++++| ++++.++.. . +..
T Consensus 6 ~~~~~~~~~~l~~lv-~i~s-~s~~~~e~~~~~~l~~~l~~~g------~~~~~~~~~-~-----------------g~~ 59 (198)
T 1q7l_A 6 PEEEHPSVTLFRQYL-RIRT-VQPKPDYGAAVAFFEETARQLG------LGCQKVEVA-P-----------------GYV 59 (198)
T ss_dssp -CCCCHHHHHHHHHH-TSCC-BTTSCCHHHHHHHHHHHHHHHT------CEEEEEEEE-T-----------------TEE
T ss_pred chhHHHHHHHHHHHh-cCCC-CCCCcCHHHHHHHHHHHHHHCC------CeEEEEEcC-C-----------------CCe
Confidence 356678899999999 5554 3344456789999999999998 455554321 1 235
Q ss_pred eEEEEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 007484 130 NIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPR 188 (602)
Q Consensus 130 NVi~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~ 188 (602)
|++++++|+++ +.+.|++.+|+|+||. ++|+.||++|++++|+++|.|++.+.++++
T Consensus 60 ~~i~~~~g~~~--~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~ 137 (198)
T 1q7l_A 60 VTVLTWPGTNP--TLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPR 137 (198)
T ss_dssp EEEEEECCSST--TSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred EEEEEEccCCC--CCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCC
Confidence 99999988532 2468999999999874 468899999999999999999998888899
Q ss_pred CEEEEEeCcccCC-ccchHHHHhhcCc-cCceeEEEE
Q 007484 189 PIIFLFNGAEELF-MLGAHGFMKAHKW-RDSVGAVIN 223 (602)
Q Consensus 189 ~I~flf~~aEE~g-l~GS~~f~~~h~~-~~~i~a~IN 223 (602)
+|+|+|+.+||.| +.|++.++++++. ..+..+++|
T Consensus 138 ~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~~~~id 174 (198)
T 1q7l_A 138 TIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALD 174 (198)
T ss_dssp CEEEEEESCGGGTSTTTHHHHTTSHHHHTTCEEEEEE
T ss_pred CEEEEEEcccccCccccHHHHHHhHHhccCCcCEEEe
Confidence 9999999999997 7999999875432 234556664
No 18
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.57 E-value=2.5e-14 Score=152.32 Aligned_cols=226 Identities=16% Similarity=0.201 Sum_probs=150.1
Q ss_pred HHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEE
Q 007484 55 RAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMR 134 (602)
Q Consensus 55 ra~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~ 134 (602)
+..+.+++|+ ++.+ ++| .++++++||.+++++++ .++++| +..|++++
T Consensus 8 ~~~~~l~~L~-~~~s-~sg--~e~~~~~~l~~~l~~~g------~~~~~d----------------------~~gnlia~ 55 (373)
T 1vhe_A 8 ETLTMLKDLT-DAKG-IPG--NEREVRQVMKSYIEPFA------DEVTTD----------------------RLGSLIAK 55 (373)
T ss_dssp HHHHHHHHHH-HSCC-CTT--CCHHHHHHHHHHHGGGC------SEEEEC----------------------TTCCEEEE
T ss_pred HHHHHHHHHH-cCCC-CCC--chHHHHHHHHHHHHhhC------CEEEEc----------------------CCCcEEEE
Confidence 5788899998 4433 333 34588999999999998 445443 12499999
Q ss_pred EeCCCCCCCCCEEEEeeecCCCCC--------------------------------------------------------
Q 007484 135 ISSTDSQDTDPSVLMNGHFDGPLS-------------------------------------------------------- 158 (602)
Q Consensus 135 i~g~~~~~~~~~vll~aH~Dsv~~-------------------------------------------------------- 158 (602)
++|++ ..+.|++++|+|+++.
T Consensus 56 ~~g~~---~~~~vll~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~ 132 (373)
T 1vhe_A 56 KTGAE---NGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARK 132 (373)
T ss_dssp EESST---TSCEEEEEEECCCCEEEEEEECTTSCEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTTTT
T ss_pred ecCCC---CCceEEEEecCCcCCEEEEEECCCCeEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhhcc
Confidence 98752 2467999999999871
Q ss_pred -------------------------CCC---------------------CCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 007484 159 -------------------------SPG---------------------AGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (602)
Q Consensus 159 -------------------------~pG---------------------A~D~~sGva~~LE~ar~L~~~~~~p~~~I~f 192 (602)
.+| +.||++|++++|+++|.+++.+ ++++|+|
T Consensus 133 ~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~ 210 (373)
T 1vhe_A 133 KSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNIVYG 210 (373)
T ss_dssp SCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSEEEE
T ss_pred CCCChhHeEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCceEEE
Confidence 112 7999999999999999998763 6689999
Q ss_pred EEeCcccCCccchHHHHhhcCccCceeEEEEeccCCCCCC----------------ceEE-ecC--CCCChhhhhhhhhc
Q 007484 193 LFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGGL----------------DLVC-QSG--PSSWPSSVYAQSAI 253 (602)
Q Consensus 193 lf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G~gg~----------------~~lf-q~g--p~~~~~~~y~~~~~ 253 (602)
+|+++||.|+.|++.+... .+...+|++|+.+.++. .+.. ..+ +++.+.+...+.+.
T Consensus 211 ~~~~~EE~G~~G~~~~~~~----~~~d~~i~~d~~~~~~~~g~~~~~~~~~lg~G~~i~~~~~~~~~~~~l~~~l~~~a~ 286 (373)
T 1vhe_A 211 VGTVQEEVGLRGAKTAAHT----IQPDIAFGVDVGIAGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAE 286 (373)
T ss_dssp EEESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCTTTCCCCTTSCCEEEEEETTEECCHHHHHHHHHHHH
T ss_pred EEECCcccChhhHHHHhcc----cCCCEEEEEeccccCCCCCCcccccccccCCCceEEEeCCCCCCCHHHHHHHHHHHH
Confidence 9999999999999988642 23467899998664321 0100 000 00111111111110
Q ss_pred ccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHHHHhC
Q 007484 254 YPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (602)
Q Consensus 254 ~p~~~~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (602)
. .+-....+. ..+.+||...|.....|+|.+++.... ..+||+. |+++.+.+++..+.+.++++.+..
T Consensus 287 ~-~gi~~~~~~--~~~ggtDa~~~~~~~~GiPtv~lg~~~--~~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l~~ 354 (373)
T 1vhe_A 287 E-AGIPYQFDA--IAGGGTDSGAIHLTANGVPALSITIAT--RYIHTHA---AMLHRDDYENAVKLITEVIKKLDR 354 (373)
T ss_dssp H-HTCCCEEEE--ETTCCCTHHHHTTSTTCCCEEEEEEEE--BSTTSSC---EEEEHHHHHHHHHHHHHHHHHCCH
T ss_pred H-cCCCeEEec--CCCCCccHHHHHHhCCCCcEEEEcccc--ccCCChh---heecHHHHHHHHHHHHHHHHHhcH
Confidence 0 000000001 124689999993212699999865432 2479985 667899999999999999988754
No 19
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.55 E-value=3e-14 Score=150.50 Aligned_cols=222 Identities=14% Similarity=0.113 Sum_probs=147.1
Q ss_pred HHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEE
Q 007484 56 AIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRI 135 (602)
Q Consensus 56 a~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i 135 (602)
..+.+++|+ ++.+ ++|.++ +++++|+.+++++++ .++++| +..|+++++
T Consensus 8 ~~~~l~~L~-~~~s-~sg~e~-~~~~~~l~~~l~~~g------~~~~~d----------------------~~gnlia~~ 56 (353)
T 1y0y_A 8 DYELLKKVV-EAPG-VSGYEF-LGIRDVVIEEIKDYV------DEVKVD----------------------KLGNVIAHK 56 (353)
T ss_dssp CHHHHHHHH-HSCC-BTTCGG-GTHHHHHHHHHGGGS------SEEEEC----------------------TTCCEEEEE
T ss_pred HHHHHHHHH-hCCC-CCccch-HHHHHHHHHHHHhhC------CeEEEc----------------------CCCCEEEEe
Confidence 457889998 4433 344332 578999999999998 445443 124999998
Q ss_pred eCCCCCCCCCEEEEeeecCCCC----------------------------------------------------------
Q 007484 136 SSTDSQDTDPSVLMNGHFDGPL---------------------------------------------------------- 157 (602)
Q Consensus 136 ~g~~~~~~~~~vll~aH~Dsv~---------------------------------------------------------- 157 (602)
+|+ ++.+++++|+|+++
T Consensus 57 ~g~-----~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~ 131 (353)
T 1y0y_A 57 KGE-----GPKVMIAAHMDQIGLMVTHIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRK 131 (353)
T ss_dssp CCS-----SCEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEEEETTEEEEEEEEC------------
T ss_pred cCC-----CccEEEEeccCcccEEEEEECCCceEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhcc
Confidence 763 36799999999994
Q ss_pred ------------------------CCCC--------------------CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEE
Q 007484 158 ------------------------SSPG--------------------AGDCGSCVASMLELARLTIDSGWIPPRPIIFL 193 (602)
Q Consensus 158 ------------------------~~pG--------------------A~D~~sGva~~LE~ar~L~~~~~~p~~~I~fl 193 (602)
.++| +.||++|++++|++++.+++ +++++.|+
T Consensus 132 ~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~~~ 207 (353)
T 1y0y_A 132 KAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVYFV 207 (353)
T ss_dssp -CCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEEEE
T ss_pred CCCChHHeEEEeCCCCHHHHHHcCCCCCCEEEeccCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEEEE
Confidence 1244 69999999999999999875 67899999
Q ss_pred EeCcccCCccchHHHHhhcCccCceeEEEEeccCCCCCC-c---------------eEE-ecC--CCCChhhhhhhhhcc
Q 007484 194 FNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGGL-D---------------LVC-QSG--PSSWPSSVYAQSAIY 254 (602)
Q Consensus 194 f~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G~gg~-~---------------~lf-q~g--p~~~~~~~y~~~~~~ 254 (602)
|+++||.|+.|++.+... .+...+|++|+.+.++. . +.+ ..+ .++.+.+...+.+..
T Consensus 208 ~~~~EE~g~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~~g~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~~ 283 (353)
T 1y0y_A 208 ATVQEEVGLRGARTSAFG----IEPDYGFAIDVTIAADIPGTPEHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELAKK 283 (353)
T ss_dssp EESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCGGGCCCCTTSCEEEEEEETTEECCHHHHHHHHHHHHH
T ss_pred EECCcccchhHHHHHhhc----cCCCEEEEEecccccCCCCCccccCccccCCCcEEEEeCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999988652 24568899998664321 1 000 000 001111111111100
Q ss_pred cccccccccccCCCCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHHHHhC
Q 007484 255 PMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (602)
Q Consensus 255 p~~~~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (602)
.+... + .....+.+||...|.....|+|.+++... . ..+||+. |+++.+.+.+..+.+.++++.++.
T Consensus 284 -~gi~~-~-~~~~~~ggsDa~~~~~~~~GiPtv~lg~~-~-~~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 284 -HEIPY-Q-LEILLGGGTDAGAIHLTKAGVPTGALSVP-A-RYIHSNT---EVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp -TTCCE-E-EEECSSCCCTHHHHTTSTTCCCEEEEEEE-E-BSCSSSC---EEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred -cCCCE-E-EeecCCCCchHHHHHHhCCCCcEEEEccc-c-cccCCHH---HhcCHHHHHHHHHHHHHHHHhhhh
Confidence 00000 0 00113468999999321269999987543 2 3589975 666788999999999999988754
No 20
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.53 E-value=9.2e-14 Score=146.63 Aligned_cols=221 Identities=14% Similarity=0.131 Sum_probs=139.3
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceE
Q 007484 52 SEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNI 131 (602)
Q Consensus 52 s~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NV 131 (602)
+.+++.+.+++|. ++.+ + |..++++++|+.++++++| ++++++. ..|+
T Consensus 4 ~~~~~~~~l~~lv-~i~s-~--s~~e~~~~~~l~~~l~~~g------~~~~~d~----------------------~gnl 51 (349)
T 2gre_A 4 HTKETMELIKELV-SIPS-P--SGNTAKIINFIENYVSEWN------VETKRNN----------------------KGAL 51 (349)
T ss_dssp HHHHHHHHHHHHH-TSCC-B--TTCCHHHHHHHHHHTTTSS------SEEEECS----------------------SSCE
T ss_pred cHHHHHHHHHHHH-hCCC-C--CccHHHHHHHHHHHHHHhC------CEEEEec----------------------CCcE
Confidence 4577889999999 5543 2 3334578999999999998 4554431 2389
Q ss_pred EEEEeCCCCCCCCCEEEEeeecCCCC----------------C-------------------C-----------------
Q 007484 132 VMRISSTDSQDTDPSVLMNGHFDGPL----------------S-------------------S----------------- 159 (602)
Q Consensus 132 i~~i~g~~~~~~~~~vll~aH~Dsv~----------------~-------------------~----------------- 159 (602)
+++++|++ +.+.|++.+|+|+++ . +
T Consensus 52 ~a~~~g~~---~~~~ill~~H~Dtv~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~ 128 (349)
T 2gre_A 52 ILTVKGKN---DAQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVY 128 (349)
T ss_dssp EEEECCSE---EEEEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEECTTSCEEEEEEECC-------
T ss_pred EEEecCCC---CCceEEEEecccccceeEEEECCCCeEEEEecCCCccccccCcEEEEEcCCCCEEEEEEeCCCCCcccc
Confidence 99998742 235799999999982 0 0
Q ss_pred ------------------------------------------------CC-----CCCChhHHHHHHHHHHHHHhcCCCC
Q 007484 160 ------------------------------------------------PG-----AGDCGSCVASMLELARLTIDSGWIP 186 (602)
Q Consensus 160 ------------------------------------------------pG-----A~D~~sGva~~LE~ar~L~~~~~~p 186 (602)
.| +.||++|++++|+++|.+++.+.++
T Consensus 129 ~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~~~ 208 (349)
T 2gre_A 129 KDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTL 208 (349)
T ss_dssp ------------CEEEESSCCCSHHHHHHTTCCTTCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTCCC
T ss_pred chhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccCCC
Confidence 01 6999999999999999999887778
Q ss_pred CCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccCCCCC-C-------ceEEe--cCCC-CChhhhhhhhh---
Q 007484 187 PRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGG-L-------DLVCQ--SGPS-SWPSSVYAQSA--- 252 (602)
Q Consensus 187 ~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G~gg-~-------~~lfq--~gp~-~~~~~~y~~~~--- 252 (602)
+++|.|+|+++||.|+.|++.+ ..+...+|++|+.+.++ + .+... .++. +.+.+...+.+
T Consensus 209 ~~~i~~~~~~~EE~G~~g~~~~------~~~~~~~i~~D~~~~~~~p~~~~~g~~i~~~~~~~~~~~~l~~~l~~~a~~~ 282 (349)
T 2gre_A 209 PYTTHFLISNNEEIGYGGNSNI------PEETVEYLAVDMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTN 282 (349)
T ss_dssp SEEEEEEEESCC----CCCCCC------CTTEEEEEEECCCCCSCC--CCTTSEEEEEEETTEECCHHHHHHHHHHHHHH
T ss_pred CceEEEEEECcccCCchhhccc------ccCCCEEEEEecccccCCCCCCCCceEEEEccCCCCCCHHHHHHHHHHHHHc
Confidence 8999999999999999999865 34678999999977653 2 11111 1111 12222222111
Q ss_pred cccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHH
Q 007484 253 IYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLK 325 (602)
Q Consensus 253 ~~p~~~~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~ 325 (602)
..|+.. +.. ...+||+.+|.....|+|.+++. ... ..+|| .|+++.+.+.+..+.+.++++
T Consensus 283 gi~~q~----~~~--~ggGsDa~~~~~~~~GiPt~~lg-~~~-~~~Hs----~E~~~~~dl~~~~~ll~~~l~ 343 (349)
T 2gre_A 283 HIEYKV----DIY--PYYGSDASAAIRAGFDVKHALIG-AGI-DSSHA----FERTHESSIAHTEALVYAYVM 343 (349)
T ss_dssp TCCEEE----EEC--SCC--------CCSSSCEEEEEE-ECC-BSTTS----SEEEEHHHHHHHHHHHHHHHH
T ss_pred CCCcEE----ecc--CCCCccHHHHHHhCCCCcEEEec-cCc-ccccc----ceeccHHHHHHHHHHHHHHHh
Confidence 112211 111 23589998884222699999764 333 34887 567778899888888777765
No 21
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.53 E-value=4.9e-14 Score=147.50 Aligned_cols=147 Identities=16% Similarity=0.037 Sum_probs=97.2
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccCCCCC----------
Q 007484 162 AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGG---------- 231 (602)
Q Consensus 162 A~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G~gg---------- 231 (602)
+.||++|++++|+++|.+++.+ ++++|.|+|+++||.|+.|++.+.+. .+...+|++|+.+...
T Consensus 171 a~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~lg~ 244 (332)
T 2wyr_A 171 GLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH----YYPQYAFAIDSFACCSPLTGDVKLGK 244 (332)
T ss_dssp THHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT----CCCSEEEEECCEECCSGGGTTCCTTS
T ss_pred cCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc----cCCCEEEEEecccccCCCCCceeeCC
Confidence 6999999999999999998764 66899999999999999999998742 3457899999876431
Q ss_pred -CceEEe--cCC-CCChhhhhhhhhcccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCC
Q 007484 232 -LDLVCQ--SGP-SSWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDR 307 (602)
Q Consensus 232 -~~~lfq--~gp-~~~~~~~y~~~~~~p~~~~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~ 307 (602)
..+... ..+ ++.+.+...+.+.. .+..... ...+.+||+..|.+ |+|++++... ...+||+. |+
T Consensus 245 G~~i~~~d~~~~~~~~l~~~l~~~~~~-~gi~~~~---~~~~ggtDa~~~~~---GiPtv~lg~~--~~~~Hs~~---E~ 312 (332)
T 2wyr_A 245 GPVIRAVDNSAIYSRDLARKVWSIAEK-NGIEIQI---GVTGGGTDASAFQD---RSKTLALSVP--IKYLHSEV---ET 312 (332)
T ss_dssp CCEEEEECSSCBCCHHHHHHHHHHHHH-TTCCCEE---EECSSCCGGGGGTT---TSEEEEEECE--EBSCSSTT---CE
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHH-cCCCeEE---ecCCCCchHHHHHc---CCCEEEEcCC--cCCCCChh---hc
Confidence 111110 001 11112222111110 0000000 11346899999963 9999986532 23589975 66
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 007484 308 LLPGSVQARGDNLFNVLKA 326 (602)
Q Consensus 308 id~~~lq~~g~~~l~l~~~ 326 (602)
++.+.+++..+.+.++++.
T Consensus 313 v~~~dl~~~~~ll~~~~~~ 331 (332)
T 2wyr_A 313 LHLNDLEKLVKLIEALAFE 331 (332)
T ss_dssp EEHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHh
Confidence 7788999999988888765
No 22
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.48 E-value=4.1e-13 Score=143.39 Aligned_cols=146 Identities=21% Similarity=0.310 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCh-hHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceE
Q 007484 53 EARAIQHVRVLADEIGDRQEGRP-GLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNI 131 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~~gS~-~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NV 131 (602)
.++..+.+++|. +|.+ +.+.+ +.+++++||.++++++| ++++.++.... ....|+
T Consensus 18 ~~~~~~~l~~lv-~i~s-~s~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~~----------------~~~~~v 73 (393)
T 1cg2_A 18 QPAVIKTLEKLV-NIET-GTGDAEGIAAAGNFLEAELKNLG------FTVTRSKSAGL----------------VVGDNI 73 (393)
T ss_dssp HHHHHHHHHHHH-TSCC-BTTCHHHHHHHHHHHHHHHHHTT------CEEEEEECSTT----------------CCSEEE
T ss_pred HHHHHHHHHHHh-cCCC-CCCCHHHHHHHHHHHHHHHHHcC------CeEEEEecCcC----------------CCCCeE
Confidence 467888888888 5655 34444 34589999999999999 55555432100 012499
Q ss_pred EEEEeCCCCCCCCCEEEEeeecCCCCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEE
Q 007484 132 VMRISSTDSQDTDPSVLMNGHFDGPLS-----------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLF 194 (602)
Q Consensus 132 i~~i~g~~~~~~~~~vll~aH~Dsv~~-----------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf 194 (602)
+++++|++ ++.|++.+|+|+||. ++|+.|+++|++++|++++.|++.+.+++++|+|+|
T Consensus 74 ~a~~~g~~----~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~ 149 (393)
T 1cg2_A 74 VGKIKGRG----GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLF 149 (393)
T ss_dssp EEEEECSS----CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEE
T ss_pred EEEECCCC----CceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEE
Confidence 99998742 256999999999974 378999999999999999999998777778999999
Q ss_pred eCcccCCccchHHHHhhcCccCceeEEEEeccCC
Q 007484 195 NGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 195 ~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
+.+||.|..|++.+++++. .++++++++|..+
T Consensus 150 ~~~EE~g~~G~~~~~~~~~--~~~d~~i~~e~~~ 181 (393)
T 1cg2_A 150 NTDEEKGSFGSRDLIQEEA--KLADYVLSFEPTS 181 (393)
T ss_dssp ESCGGGTTTTTHHHHHHHH--HHCSEEEECCCEE
T ss_pred EcccccCCccHHHHHHHHh--hcCCEEEEeCCCC
Confidence 9999999999999998643 3577889998654
No 23
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.48 E-value=4.2e-13 Score=144.10 Aligned_cols=129 Identities=20% Similarity=0.213 Sum_probs=108.2
Q ss_pred cHHHHHHHHHHHHHhcCC-------CCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccccccccccccc
Q 007484 52 SEARAIQHVRVLADEIGD-------RQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLG 124 (602)
Q Consensus 52 s~era~~~L~~La~~ig~-------R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~ 124 (602)
+.+|.++.+++|+ ++++ |...|.++.++++||.++++++| ++++.|.
T Consensus 3 ~~~~~~~~l~~l~-~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g------~~~~~d~------------------- 56 (408)
T 3n5f_A 3 QGERLWQRLMELG-EVGKQPSGGVTRLSFTAEERRAKDLVASYMREAG------LFVYEDA------------------- 56 (408)
T ss_dssp CHHHHHHHHHHHH-TTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHT------CEEEECT-------------------
T ss_pred CHHHHHHHHHHHH-ccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCC------CEEEEcC-------------------
Confidence 5789999999999 6765 44557888899999999999998 4554421
Q ss_pred ccccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccC----
Q 007484 125 YRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEEL---- 200 (602)
Q Consensus 125 y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~---- 200 (602)
..|++++++|+++ +.+.|++++|+|++|. .|..|+++|++++|++++.|++.+.+++++|.|+|+.+||.
T Consensus 57 ---~gnv~a~~~g~~~--~~~~i~l~aH~D~v~~-~g~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~ 130 (408)
T 3n5f_A 57 ---AGNLIGRKEGTNP--DATVVLVGSHLDSVYN-GGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFR 130 (408)
T ss_dssp ---TCCEEEEECCSST--TSCEEEEEEESCCCTT-BCSSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTT
T ss_pred ---CCCEEEEecCCCC--CCCEEEEEecCCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccC
Confidence 2399999998642 3578999999999995 58899999999999999999998878999999999999996
Q ss_pred -CccchHHHHhhc
Q 007484 201 -FMLGAHGFMKAH 212 (602)
Q Consensus 201 -gl~GS~~f~~~h 212 (602)
|+.||+.++.+.
T Consensus 131 ~g~~Gs~~~~~~~ 143 (408)
T 3n5f_A 131 FGMIGSRAMAGTL 143 (408)
T ss_dssp CCCHHHHHHHTCC
T ss_pred CCCcCHHHHHcCC
Confidence 788999998643
No 24
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.45 E-value=1.6e-12 Score=142.36 Aligned_cols=156 Identities=17% Similarity=0.171 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCh----hHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccccccccccccccccc
Q 007484 53 EARAIQHVRVLADEIGDRQEGRP----GLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNH 128 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~~gS~----~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~ 128 (602)
.++..+.+++|. ++.. +.+.+ ++.++++||.++++++| ++++.+..... ... .+. .....
T Consensus 19 ~~~~~~~l~~l~-~~ps-~s~~e~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~~---~~~-~~~----~~~~~ 82 (479)
T 2zog_A 19 QDRYVKKLAEWV-AIQS-VSAWPEKRGEIRRMMEVAAADVQRLG------GSVELVDIGKQ---KLP-DGS----EIPLP 82 (479)
T ss_dssp HHHHHHHHHHHH-HSCC-BTTCGGGHHHHHHHHHHHHHHHHHTT------CEEEEECCCEE---ECT-TSC----EEECC
T ss_pred HHHHHHHHHHHh-cCCC-ccCCcccchHHHHHHHHHHHHHHHcC------CeEEEeecccc---ccC-CCc----ccCCC
Confidence 467888899998 4543 33433 34589999999999999 55555431100 000 000 00012
Q ss_pred ceEEEEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCC
Q 007484 129 TNIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPP 187 (602)
Q Consensus 129 ~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~ 187 (602)
.||++++++. .+.+.|++.+|+|++|. ++|+.||++|++++|++++.|++.+.+++
T Consensus 83 ~~v~a~~~~~---~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~ 159 (479)
T 2zog_A 83 PILLGKLGSD---PQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIP 159 (479)
T ss_dssp CEEEEEECCC---TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCS
T ss_pred CEEEEEecCC---CCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCC
Confidence 6999999763 23468999999999875 46889999999999999999999888888
Q ss_pred CCEEEEEeCcccCCccchHHHHhhcC--ccCceeEEEEeccC
Q 007484 188 RPIIFLFNGAEELFMLGAHGFMKAHK--WRDSVGAVINVEAS 227 (602)
Q Consensus 188 ~~I~flf~~aEE~gl~GS~~f~~~h~--~~~~i~a~INLD~~ 227 (602)
++|+|+|+.+||.|..|++.++++++ +.+++++++++|..
T Consensus 160 ~~v~~~~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~ 201 (479)
T 2zog_A 160 VNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNY 201 (479)
T ss_dssp SEEEEEEESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCB
T ss_pred CcEEEEEecccccCCccHHHHHHhhhhhhcccCCEEEEeCCC
Confidence 99999999999999999999998764 33467889999864
No 25
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.43 E-value=1.2e-12 Score=143.70 Aligned_cols=145 Identities=17% Similarity=0.240 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEE
Q 007484 55 RAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMR 134 (602)
Q Consensus 55 ra~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~ 134 (602)
+..+.+++|. ++.......++..++++||.++++++| +++++++. ....|++++
T Consensus 45 ~~~~~l~~l~-~ips~s~~e~~~~~~~~~l~~~l~~~G------~~~~~~~~-------------------~~~~~v~a~ 98 (481)
T 2pok_A 45 HYFEVLRTLI-SKKSVFAQQVGLKEVANYLGEIFKRVG------AEVEIDES-------------------YTAPFVMAH 98 (481)
T ss_dssp HHHHHHHHHH-HSCCCGGGCTTHHHHHHHHHHHHHHTT------CEEEEECS-------------------SSSCEEEEE
T ss_pred HHHHHHHHHH-cCCCcCCCCHHHHHHHHHHHHHHHHcC------CEEEEecC-------------------CCCcEEEEE
Confidence 6788888888 554432222344689999999999998 55555421 123599999
Q ss_pred EeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEE
Q 007484 135 ISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFL 193 (602)
Q Consensus 135 i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~fl 193 (602)
++|++ ++.+.|++.+|+|+||. ++|+.||++|++++|++++.|++.+.+++++|+|+
T Consensus 99 ~~g~~--~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~ 176 (481)
T 2pok_A 99 FKSSR--PDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFI 176 (481)
T ss_dssp ECCSS--TTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEE
T ss_pred ecCCC--CCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 98742 23578999999999874 46889999999999999999998755788999999
Q ss_pred EeCcccCCccchHHHHhhcCc-cCceeEEEEeccC
Q 007484 194 FNGAEELFMLGAHGFMKAHKW-RDSVGAVINVEAS 227 (602)
Q Consensus 194 f~~aEE~gl~GS~~f~~~h~~-~~~i~a~INLD~~ 227 (602)
|+.+||.|..|++.+++++.. .++++++++.|..
T Consensus 177 ~~~~EE~g~~g~~~~~~~~~~~~~~~d~~i~~~~~ 211 (481)
T 2pok_A 177 MEGAEESASTDLDKYLEKHADKLRGADLLVWEQGT 211 (481)
T ss_dssp EESCGGGTTTTHHHHHHHHHHHHTTCSEEECSCCB
T ss_pred EecccccCchhHHHHHHHhHhhccCCCEEEECCCC
Confidence 999999999999999876531 1236788888864
No 26
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.41 E-value=4.1e-13 Score=141.05 Aligned_cols=152 Identities=14% Similarity=0.091 Sum_probs=83.1
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccCCCC---CCceE---
Q 007484 162 AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTG---GLDLV--- 235 (602)
Q Consensus 162 A~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G~g---g~~~l--- 235 (602)
+.||++|++++|+++|.++ +++++++|+|+++||.|+.|++.+.++ .+...+|++|+...+ |+.-.
T Consensus 165 a~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~~G~~~~~~~----~~~~~~i~~d~~~~~~~~G~~~h~~~ 236 (340)
T 2fvg_A 165 AFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGLRGSAVVVEQ----LKPTCAIVVETTTAGDNPELEERKWA 236 (340)
T ss_dssp CHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC-----CHHHHHH----HCCSEEEEEEEEEECSCSTTCCSSSS
T ss_pred cCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccchhhhHHHhhc----cCCCEEEEEecccCCCCCCCccccCC
Confidence 6899999999999999986 477899999999999999999998873 234678999976432 21100
Q ss_pred EecCCCC-------------ChhhhhhhhhcccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcc
Q 007484 236 CQSGPSS-------------WPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSH 302 (602)
Q Consensus 236 fq~gp~~-------------~~~~~y~~~~~~p~~~~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~ 302 (602)
-+.|-++ .+.+...+.+. ..+... ......+.+||...|.....|+|.+.+... .. .+||+.
T Consensus 237 ~~~G~g~~i~~~~~~~~~~~~l~~~l~~~a~-~~gi~~--~~~~~~~ggtDa~~~~~~~~GiP~v~~g~~-~~-~~Hs~~ 311 (340)
T 2fvg_A 237 THLGDGPAITFYHRGYVIPKEIFQTIVDTAK-NNDIPF--QMKRRTAGGTDAGRYARTAYGVPAGVISTP-AR-YIHSPN 311 (340)
T ss_dssp CCTTSCCEECSCCSSSCCCHHHHHHHHHHHH-HTTCCC--EECCCC-------------CCSCEEEEEEE-EE-ESSTTC
T ss_pred cccCCCcEEEEeCCCCCCCHHHHHHHHHHHH-HcCCCe--EEEecCCCCccHHHHHhhCCCCcEEEeccc-cc-ccCChh
Confidence 0000000 00111111000 000000 000023468999998632259999976432 22 389986
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHHHhC
Q 007484 303 DTVDRLLPGSVQARGDNLFNVLKAFSN 329 (602)
Q Consensus 303 Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (602)
+ +++.+.+++..+.+.++++.+..
T Consensus 312 E---~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 312 S---IIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp E---EEEHHHHHHHHHHHHHHHHHCHH
T ss_pred h---cccHHHHHHHHHHHHHHHHhccc
Confidence 4 56789999999999999888754
No 27
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.39 E-value=4e-12 Score=134.17 Aligned_cols=134 Identities=21% Similarity=0.247 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEE
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~ 133 (602)
++..+.+++|. ++.. -|.+++++++|+.++++++| ++++.+ ..|+++
T Consensus 11 ~~~~~~~~~l~-~~ps---~s~~e~~~~~~l~~~l~~~g------~~~~~~-----------------------~~nv~a 57 (356)
T 3ct9_A 11 AEAVSLLKSLI-SIPS---ISREETQAADFLQNYIEAEG------MQTGRK-----------------------GNNVWC 57 (356)
T ss_dssp HHHHHHHHHHH-TSCC---BTTCCHHHHHHHHHHHHHTT------CCEEEE-----------------------TTEEEE
T ss_pred HHHHHHHHHHh-cCCC---CCCChHHHHHHHHHHHHHCC------CeEEEE-----------------------eeeEEE
Confidence 46777788887 4333 23344588999999999998 444433 149999
Q ss_pred EEeCCCCCCCCCEEEEeeecCCCCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEE
Q 007484 134 RISSTDSQDTDPSVLMNGHFDGPLS-------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLF 194 (602)
Q Consensus 134 ~i~g~~~~~~~~~vll~aH~Dsv~~-------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf 194 (602)
+++|++ .+.+.|++.+|+|++|. ++|+.|+++|++++|++++.|++.+ ++++|+|+|
T Consensus 58 ~~~g~~--~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~ 133 (356)
T 3ct9_A 58 LSPMFD--LKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYLA 133 (356)
T ss_dssp ECSSCC--TTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEEE
T ss_pred EEecCC--CCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEE
Confidence 998732 23468999999999974 4578899999999999999999875 789999999
Q ss_pred eCcccC-CccchHHHHhhcCccCceeEEEEeccC
Q 007484 195 NGAEEL-FMLGAHGFMKAHKWRDSVGAVINVEAS 227 (602)
Q Consensus 195 ~~aEE~-gl~GS~~f~~~h~~~~~i~a~INLD~~ 227 (602)
+.+||. |+.|++.++++.+ ++++.++.|..
T Consensus 134 ~~~EE~~g~~G~~~~~~~~~---~~d~~i~~ep~ 164 (356)
T 3ct9_A 134 SCEEEVSGKEGIESVLPGLP---PVSFAIVGEPT 164 (356)
T ss_dssp ECCGGGTCTTTHHHHGGGSC---CCSEEEECCSB
T ss_pred EeCcccCCccCHHHHHhhCC---CCCEEEEcCCC
Confidence 999999 8999999998652 45688888864
No 28
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.37 E-value=8.2e-12 Score=134.77 Aligned_cols=157 Identities=14% Similarity=0.124 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccc-cccc-cccccceE
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGH-SISL-GYRNHTNI 131 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~-~~~~-~y~~~~NV 131 (602)
++..+.+++|. ++ +..|.+++++++||.++|+++| ++++....... ....+.+. +... ......|+
T Consensus 26 ~~~~~~l~~l~-~~---ps~s~~e~~~~~~l~~~l~~~G------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v 93 (433)
T 3pfo_A 26 NDQVAFLQRMV-QF---RSVRGEEAPQQEWLAQQFADRG------YKVDTFSLADV--DIASHPKAAPMDTIDPAGSMQV 93 (433)
T ss_dssp HHHHHHHHHHH-TS---CCBTTCCHHHHHHHHHHHHHTT------CEEEEEETGGG--TGGGSTTCCCCTTCCGGGCEEE
T ss_pred HHHHHHHHHHh-cC---CCCCCCHHHHHHHHHHHHHHCC------CceEEEecchh--hhhccccccccccccCCCCcEE
Confidence 45666777776 33 2344555689999999999998 45544321100 00000000 0000 12456899
Q ss_pred EEEEeCCCCCCCCCEEEEeeecCCCCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCCE
Q 007484 132 VMRISSTDSQDTDPSVLMNGHFDGPLSS---------------------PGAGDCGSCVASMLELARLTIDSGWIPPRPI 190 (602)
Q Consensus 132 i~~i~g~~~~~~~~~vll~aH~Dsv~~~---------------------pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I 190 (602)
+++++|.+ +.+.|++.+|+|++|.+ +|+.|+++|++++|++++.|++.+.+++++|
T Consensus 94 ia~~~g~~---~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~v 170 (433)
T 3pfo_A 94 VATADSDG---KGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDARV 170 (433)
T ss_dssp EEEECCCC---CSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSCE
T ss_pred EEEEecCC---CCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCccE
Confidence 99998742 34679999999999853 4899999999999999999998877788999
Q ss_pred EEEEeCcccCCccchHHHHhhcCccCceeEEEEeccCC
Q 007484 191 IFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 191 ~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
.|+|..+||.|..|++.++++. .+++++++.|..+
T Consensus 171 ~~~~~~~EE~g~~G~~~~~~~~---~~~d~~i~~ep~~ 205 (433)
T 3pfo_A 171 HVQTVTEEESTGNGALSTLMRG---YRADACLIPEPTG 205 (433)
T ss_dssp EEEEESCTTTTCHHHHHHHHTT---CCCSEEEECCCCS
T ss_pred EEEEEecCccCChhHHHHHhcC---CCCCEEEEeCCCC
Confidence 9999999999989999988743 2577888888543
No 29
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.36 E-value=2.9e-12 Score=138.89 Aligned_cols=139 Identities=14% Similarity=0.221 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHhcCCCCC-------CChhHHHHHHHHHHHHhcccccCCCcee-EEEEeeeecCccccccccccccccc
Q 007484 54 ARAIQHVRVLADEIGDRQE-------GRPGLREAAVYIKTQLEGIKERAGPKFR-IEIEENVVNGSFNMIFLGHSISLGY 125 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~-------gS~~~e~a~~yL~~~l~~ig~~~~~~~~-vevd~~~~~G~~~~~~~~~~~~~~y 125 (602)
+|..+.+++|. +|.+... .++++.++++||.++++++| ++ +++|+
T Consensus 27 ~~~~~~l~~lv-~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G------~~~~~~d~-------------------- 79 (434)
T 3ife_A 27 EELIERFTRYV-KIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVG------LTEVTMDD-------------------- 79 (434)
T ss_dssp HHHHHHHHHHH-TSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHT------CEEEEECT--------------------
T ss_pred HHHHHHHHhhE-EeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcC------CceEEECC--------------------
Confidence 57788888888 5654321 23466799999999999999 43 55431
Q ss_pred cccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCC---------------------------------------------
Q 007484 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSP--------------------------------------------- 160 (602)
Q Consensus 126 ~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~p--------------------------------------------- 160 (602)
..||+++++|+++ ++.+.|++++|+|+||..+
T Consensus 80 --~~nv~a~~~g~~~-~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~ 156 (434)
T 3ife_A 80 --NGYVMATLPANTD-KDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIIT 156 (434)
T ss_dssp --TSCEEEEECCBSS-SCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEE
T ss_pred --CcEEEEEeCCCCC-CCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEE
Confidence 2499999998642 2346799999999997411
Q ss_pred --C----CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEecc
Q 007484 161 --G----AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEA 226 (602)
Q Consensus 161 --G----A~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~ 226 (602)
| +.||++|++++|++++.|++.+.+++++|.|+|+.+||.| .|++.+..+. . ++++++++|.
T Consensus 157 grG~t~~~~D~K~gva~~l~a~~~L~~~~~~~~~~i~~if~~~EE~g-~Ga~~~~~~~-~--~~d~~~~~d~ 224 (434)
T 3ife_A 157 TDGTTLLGADDKAGLTEIMVAMNYLIHNPQIKHGKIRVAFTPDEEIG-RGPAHFDVEA-F--GASFAYMMDG 224 (434)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHHHHHHTCTTSCBCCEEEEEESCGGGT-CTGGGCCHHH-H--CCSEEEECCC
T ss_pred CCCccchhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECCcccC-hHHHHhhhhh-c--CCCEEEEecC
Confidence 2 4899999999999999999887788999999999999999 8988764321 1 5778899885
No 30
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.35 E-value=1.3e-11 Score=135.68 Aligned_cols=151 Identities=17% Similarity=0.158 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHhcCCCC--CCCh----hHHHHHHHHHHHHhcccccCCCceeEEEEeeee----cCccccccccccccc
Q 007484 54 ARAIQHVRVLADEIGDRQ--EGRP----GLREAAVYIKTQLEGIKERAGPKFRIEIEENVV----NGSFNMIFLGHSISL 123 (602)
Q Consensus 54 era~~~L~~La~~ig~R~--~gS~----~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~----~G~~~~~~~~~~~~~ 123 (602)
++..+.+++|. ++.. + .+.+ +++++.+||.++|+++| ++++.++... +|.
T Consensus 25 ~~~i~~l~~lv-~ips-~~~s~~~~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~~~~~~g~------------ 84 (485)
T 3dlj_A 25 DEFVQTLKEWV-AIES-DSVQPVPRFRQELFRMMAVAADTLQRLG------ARVASVDMGPQQLPDGQ------------ 84 (485)
T ss_dssp HHHHHHHHHHH-TSCC-BSSSCCHHHHHHHHHHHHHHHHHHHHTT------CEEEEECCCEEEC--CC------------
T ss_pred HHHHHHHHHHh-cCCC-ccCCCCccccHHHHHHHHHHHHHHHHcC------CeEEEEecCcccccCCC------------
Confidence 56777777887 4433 2 3332 24589999999999999 4555432110 110
Q ss_pred cccccceEEEEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhc
Q 007484 124 GYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDS 182 (602)
Q Consensus 124 ~y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~ 182 (602)
.+....|+++++++. .+.+.|++.+|+|++|. ++|+.||++|++++|++++.|++.
T Consensus 85 ~~~~~~~v~a~~~~~---~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~ 161 (485)
T 3dlj_A 85 SLPIPPVILAELGSD---PTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRAL 161 (485)
T ss_dssp EEECCCEEEEEECCC---TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHT
T ss_pred ccCCCcEEEEEECCC---CCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHh
Confidence 000135899999653 23578999999999974 478999999999999999999998
Q ss_pred CCCCCCCEEEEEeCcccCCccchHHHHhhcCc--cCceeEEEEeccC
Q 007484 183 GWIPPRPIIFLFNGAEELFMLGAHGFMKAHKW--RDSVGAVINVEAS 227 (602)
Q Consensus 183 ~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~--~~~i~a~INLD~~ 227 (602)
+.+++++|+|+|..+||.|..|++.+++++.. .+++.+++++|..
T Consensus 162 ~~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~ 208 (485)
T 3dlj_A 162 EQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNL 208 (485)
T ss_dssp TCCCSSEEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCB
T ss_pred CCCCCccEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCC
Confidence 88889999999999999999999999987642 3578999999964
No 31
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.32 E-value=9.8e-12 Score=131.56 Aligned_cols=149 Identities=16% Similarity=0.256 Sum_probs=111.7
Q ss_pred ccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccce
Q 007484 51 FSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTN 130 (602)
Q Consensus 51 Fs~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~N 130 (602)
.+.++..+.+++|. ++.. .|.++.++++||.++|+++| ++++.+.... .......|
T Consensus 3 ~~~~~~~~~l~~l~-~~ps---~s~~e~~~~~~l~~~l~~~G------~~v~~~~~~~--------------~~~~~~~n 58 (373)
T 3gb0_A 3 INQERLVNEFMELV-QVDS---ETKFEAEICKVLTKKFTDLG------VEVFEDDTMA--------------VTGHGAGN 58 (373)
T ss_dssp SCHHHHHHHHHHHH-TSCC---BTTCCHHHHHHHHHHHHHTT------CEEEECSCHH--------------HHCCSSCC
T ss_pred CCHHHHHHHHHHHh-cccC---CCccHHHHHHHHHHHHHHCC------CEEEEecccc--------------ccCCCcee
Confidence 56789999999998 4443 34556799999999999999 5555432100 00112469
Q ss_pred EEEEEeCCCCCCCCCEEEEeeecCCCCC--------------CCCC----CCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 007484 131 IVMRISSTDSQDTDPSVLMNGHFDGPLS--------------SPGA----GDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (602)
Q Consensus 131 Vi~~i~g~~~~~~~~~vll~aH~Dsv~~--------------~pGA----~D~~sGva~~LE~ar~L~~~~~~p~~~I~f 192 (602)
++++++|++ .+.+.|++.+|+|++|. ++|+ .|+++|++++|++++.|++.+. ++++|.|
T Consensus 59 v~a~~~g~~--~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~ 135 (373)
T 3gb0_A 59 LICTLPATK--DGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEF 135 (373)
T ss_dssp EEEEECCSS--TTCCCEEEEEECCBCSSCSSCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEEE
T ss_pred EEEEecCCC--CCCCEEEEEEECcccCCCCCcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEE
Confidence 999998853 23467999999999973 3466 5999999999999999998764 6789999
Q ss_pred EEeCcccCCccchHHHHhhcCccCceeEEEEeccCCC
Q 007484 193 LFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGT 229 (602)
Q Consensus 193 lf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G~ 229 (602)
+|+.+||.|..|++.+..+. .+....+++|..+.
T Consensus 136 ~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~~~~~~ 169 (373)
T 3gb0_A 136 IITVGEESGLVGAKALDRER---ITAKYGYALDSDGK 169 (373)
T ss_dssp EEESCGGGTSHHHHHSCGGG---CCCSEEEEEEECSC
T ss_pred EEEeccccCchhhhhhCHHh---cCCCEEEEEcCCCC
Confidence 99999999999999885432 24567777776443
No 32
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.31 E-value=7.6e-12 Score=137.25 Aligned_cols=128 Identities=14% Similarity=0.147 Sum_probs=104.8
Q ss_pred cccHHHHHHHHHHH-HHhcCCC--------------CCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccc
Q 007484 50 RFSEARAIQHVRVL-ADEIGDR--------------QEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNM 114 (602)
Q Consensus 50 ~Fs~era~~~L~~L-a~~ig~R--------------~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~ 114 (602)
+.+.+++.+.+++| . +|++. ...|.++.++++||.++++++| ++++++
T Consensus 28 ~~~~~~~~~~l~~L~v-~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G------~~v~~d---------- 90 (474)
T 2v8h_A 28 SIASGRLNQTILETGS-QFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLG------CKVKVD---------- 90 (474)
T ss_dssp CCCTTHHHHHHHHHHH-HTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTT------CEEEEB----------
T ss_pred cCCHHHHHHHHHHHhh-hcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcC------CEEEEe----------
Confidence 45678899999999 8 56532 2346677799999999999999 555432
Q ss_pred ccccccccccccccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEE
Q 007484 115 IFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLF 194 (602)
Q Consensus 115 ~~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf 194 (602)
...|++++++|++ +.+.|++.+|+|+||.+ |..|++.|++++|++++.|++.+.+++++|+|+|
T Consensus 91 ------------~~gnvia~~~g~~---~~~~i~l~~H~DtVp~~-g~~D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif 154 (474)
T 2v8h_A 91 ------------KIGNMFAVYPGKN---GGKPTATGSHLDTQPEA-GKYDGILGVLAGLEVLRTFKDNNYVPNYDVCVVV 154 (474)
T ss_dssp ------------TTCCEEEEECCSS---CCSCEEEEECCCCCSSB-CSSTTHHHHHHHHHHHHHHHHHTCCCSSCEEEEE
T ss_pred ------------cCceEEEEECCCC---CCCeEEEEEecccCCCC-CCcCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEE
Confidence 1139999998753 22469999999999953 6789999999999999999998888899999999
Q ss_pred eCcccC-----CccchHHHHh
Q 007484 195 NGAEEL-----FMLGAHGFMK 210 (602)
Q Consensus 195 ~~aEE~-----gl~GS~~f~~ 210 (602)
+.+||. |+.||+.+..
T Consensus 155 ~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 155 WFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp CTTCSCSSSSCTTHHHHHHTT
T ss_pred ECCccCCCCCCCcccHHHHHh
Confidence 999998 7889999875
No 33
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.29 E-value=9.4e-12 Score=131.74 Aligned_cols=139 Identities=18% Similarity=0.147 Sum_probs=104.8
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCChhHH-HHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccce
Q 007484 52 SEARAIQHVRVLADEIGDRQEGRPGLR-EAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTN 130 (602)
Q Consensus 52 s~era~~~L~~La~~ig~R~~gS~~~e-~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~N 130 (602)
+.++..+.+++|. ++.. +.+.+++| ++.+||.++++++| ++++.+. .|
T Consensus 4 ~~~~~~~~l~~l~-~ips-~s~~~~~e~~~~~~l~~~l~~~G------~~~~~~~-----------------------~~ 52 (364)
T 2rb7_A 4 SMQHIVELTSDLI-RFPS-MHSRPEQISRCAGFIMDWCAQNG------IHAERMD-----------------------HD 52 (364)
T ss_dssp HHHHHHHHHHHHH-TSCC-CTTCHHHHHHHHHHHHHHHHHTT------CCCEEEE-----------------------ET
T ss_pred cHHHHHHHHHHHH-cCCC-CCCCcchHHHHHHHHHHHHHHcC------CeEEEec-----------------------CC
Confidence 3567888899888 4433 22233444 89999999999998 3333321 27
Q ss_pred EEEEEeCCCCCCCCCEEEEeeecCCCCC---------------CCCCCCChhHHHHHHHHHHHHHhcCCCC---CCC--E
Q 007484 131 IVMRISSTDSQDTDPSVLMNGHFDGPLS---------------SPGAGDCGSCVASMLELARLTIDSGWIP---PRP--I 190 (602)
Q Consensus 131 Vi~~i~g~~~~~~~~~vll~aH~Dsv~~---------------~pGA~D~~sGva~~LE~ar~L~~~~~~p---~~~--I 190 (602)
++++++|+.+ ++.+.|++.+|+|+||. ++|+.|+++|++++|++++.|++.+.++ +++ |
T Consensus 53 ~~~~~~~~~~-~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v 131 (364)
T 2rb7_A 53 GIPSVMVLPE-KGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMAL 131 (364)
T ss_dssp TEEEEEECSB-TTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCE
T ss_pred CceEEEEEcC-CCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccE
Confidence 7788875311 23467999999999974 4689999999999999999998765455 457 9
Q ss_pred EEEEeCcccC-CccchHHHHhhcCccCceeEEEEecc
Q 007484 191 IFLFNGAEEL-FMLGAHGFMKAHKWRDSVGAVINVEA 226 (602)
Q Consensus 191 ~flf~~aEE~-gl~GS~~f~~~h~~~~~i~a~INLD~ 226 (602)
+|+|+.+||. |+.|++.++++. ++++.+++|.
T Consensus 132 ~~~~~~~EE~~g~~G~~~~~~~~----~~d~~i~~d~ 164 (364)
T 2rb7_A 132 GLLITGDEEIGGMNGAAKALPLI----RADYVVALDG 164 (364)
T ss_dssp EEEEESCGGGTSTTTHHHHGGGC----EEEEEEECSS
T ss_pred EEEEEeccccCchhhHHHHHhcC----CCCEEEEccC
Confidence 9999999996 678999998854 5678888885
No 34
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.29 E-value=1e-11 Score=133.69 Aligned_cols=126 Identities=16% Similarity=0.136 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHhcCCCC-------CCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccc
Q 007484 53 EARAIQHVRVLADEIGDRQ-------EGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGY 125 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~-------~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y 125 (602)
.+++.+.+++|. +|++.. ..|.++.++++||.++++++| ++++.+.
T Consensus 8 ~~~~~~~l~~lv-~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G------~~v~~~~-------------------- 60 (423)
T 1z2l_A 8 RQAIEETLPWLS-SFGADPAGGMTRLLYSPEWLETQQQFKKRMAASG------LETRFDE-------------------- 60 (423)
T ss_dssp HHHHHHHHHHHH-HTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTT------CEEEECT--------------------
T ss_pred HHHHHHHHHHHH-hcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcC------CEEEEec--------------------
Confidence 578899999999 566432 223556699999999999998 4444321
Q ss_pred cccceEEEEEeCCCCCCCCCEEEEeeecCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccC-----
Q 007484 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEEL----- 200 (602)
Q Consensus 126 ~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~----- 200 (602)
..|++++++|+++ ..+.|++.+|+|+||. .|..|++.|++++|++++.|++.+.+++++|+|+|+.+||.
T Consensus 61 --~gnv~a~~~g~~~--~~~~i~l~~H~D~Vp~-~g~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~ 135 (423)
T 1z2l_A 61 --VGNLYGRLNGTEY--PQEVVLSGSHIDTVVN-GGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPY 135 (423)
T ss_dssp --TSCEEEEECCSSE--EEEEEEEEEECCCCTT-BCSSTTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSC
T ss_pred --CCcEEEEEcCCCC--CCCEEEEEEecCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCC
Confidence 1399999987531 2367999999999995 47899999999999999999988778899999999999998
Q ss_pred CccchHHHHh
Q 007484 201 FMLGAHGFMK 210 (602)
Q Consensus 201 gl~GS~~f~~ 210 (602)
|+.||+.+..
T Consensus 136 g~~Gs~~~~~ 145 (423)
T 1z2l_A 136 VFWGSKNIFG 145 (423)
T ss_dssp SCHHHHHHTT
T ss_pred CcccHHHHHc
Confidence 5679998876
No 35
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.29 E-value=2.1e-11 Score=128.77 Aligned_cols=138 Identities=17% Similarity=0.117 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEE
Q 007484 55 RAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMR 134 (602)
Q Consensus 55 ra~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~ 134 (602)
+..+.+++|. ++.. .|..++++++||.++|+++|.. .++++.. ..|++++
T Consensus 14 ~~~~~~~~l~-~~ps---~s~~e~~~~~~l~~~l~~~G~~-----~~~~~~~---------------------~~~~~a~ 63 (369)
T 3tx8_A 14 DPIVLTQRLV-DIPS---PSGQEKQIADEIEDALRNLNLP-----GVEVFRF---------------------NNNVLAR 63 (369)
T ss_dssp CHHHHHHHHH-SSCC---BTTCTHHHHHHHHHHHHTTTCT-----TCEEEEE---------------------TTEEEEE
T ss_pred HHHHHHHHHh-cCCC---CCccHHHHHHHHHHHHHhcCCC-----CcEEecc---------------------CCcEEEE
Confidence 4678888888 3332 3445568999999999999732 1333321 1499999
Q ss_pred EeCCCCCCCCCEEEEeeecCCCCC--------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccC
Q 007484 135 ISSTDSQDTDPSVLMNGHFDGPLS--------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEEL 200 (602)
Q Consensus 135 i~g~~~~~~~~~vll~aH~Dsv~~--------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~ 200 (602)
++|+ +.+.|++.+|+|++|. ++|+.|+++|++++|++++.|++. .+++++|.|+|..+||.
T Consensus 64 ~~~~----~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE~ 138 (369)
T 3tx8_A 64 TNRG----LASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEEV 138 (369)
T ss_dssp CCCC----CSCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCSS
T ss_pred ecCC----CCCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEecccc
Confidence 9874 2467999999999985 479999999999999999999864 46789999999999999
Q ss_pred Cc--cchHHHHhhcCccCceeEEEEeccC
Q 007484 201 FM--LGAHGFMKAHKWRDSVGAVINVEAS 227 (602)
Q Consensus 201 gl--~GS~~f~~~h~~~~~i~a~INLD~~ 227 (602)
|. .|++.++++++...+....|+.|..
T Consensus 139 g~~~~G~~~~~~~~~~~~~~~~~i~~ep~ 167 (369)
T 3tx8_A 139 ADHLNGLGHIRDEHPEWLAADLALLGEPT 167 (369)
T ss_dssp CTTSCHHHHHHHHCGGGGCCSEEEECCCC
T ss_pred CcccccHHHHHHhcccccCCCEEEEeCCC
Confidence 87 7999999877433466788888864
No 36
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.28 E-value=1.7e-11 Score=131.08 Aligned_cols=157 Identities=18% Similarity=0.211 Sum_probs=111.5
Q ss_pred CCCCcCcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccc
Q 007484 44 SDAPLDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISL 123 (602)
Q Consensus 44 ~~~~~~~Fs~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~ 123 (602)
.+.+.-+...++..+.+++|. ++.. .|..+.++++||.++|+++| ++++.+.... .
T Consensus 14 ~~~~~~~~~~~~~~~~l~~L~-~ips---~s~~E~~~~~~l~~~l~~~G------~~v~~~~~~~--------------~ 69 (396)
T 3rza_A 14 NLYFQGMINEQRLLNTFLELV-QIDS---ETGNESTIQPILKEKFIALG------LDVKEDEAAK--------------H 69 (396)
T ss_dssp -----CCSCHHHHHHHHHHHH-TSCC---BTTCTTTHHHHHHHHHHHTT------CEEEECSGGG--------------S
T ss_pred ceeEEEeecHHHHHHHHHHHe-ecCC---CCcCHHHHHHHHHHHHHHCC------CEEEEecccc--------------c
Confidence 444455678899999999998 4443 34445689999999999999 5555432100 0
Q ss_pred cccccceEEEEEeCCCCCCCCCEEEEeeecCCCCC---------------CCCC----CCChhHHHHHHHHHHHHHhcCC
Q 007484 124 GYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------SPGA----GDCGSCVASMLELARLTIDSGW 184 (602)
Q Consensus 124 ~y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~---------------~pGA----~D~~sGva~~LE~ar~L~~~~~ 184 (602)
......|++++++|+.+..+.+.|++.+|+|++|. +.|+ .||++|++++|++++.|++.+.
T Consensus 70 ~~~~~~nvia~~~g~~~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~ 149 (396)
T 3rza_A 70 PKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI 149 (396)
T ss_dssp TTCSSCCEEEEECCCCC---CCCEEEEEECCBCSSCSSCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCceEEEEECCcCCCCCCCeEEEEEECCccCCCCCcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC
Confidence 01224699999988511123467999999999963 3566 4999999999999999988764
Q ss_pred CCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccCC
Q 007484 185 IPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 185 ~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
++++|.|+|+.+||.|..|++.+..+. .+....+++|..+
T Consensus 150 -~~~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~~~~~ 189 (396)
T 3rza_A 150 -PHGQIQFVITVGEESGLIGAKELNSEL---LDADFGYAIDASA 189 (396)
T ss_dssp -CCCCEEEEEESCGGGTSHHHHHCCGGG---CCCSEEEEEEESS
T ss_pred -CCCCEEEEEEcccccccHhHhhhchhh---cccceEEEEecCC
Confidence 678999999999999999999876532 2345667777644
No 37
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.26 E-value=3.3e-11 Score=128.54 Aligned_cols=141 Identities=21% Similarity=0.226 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEE
Q 007484 53 EARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi 132 (602)
+++..+.+++|. ++ +..|..++++++||.++++++| ++++... . .+..|++
T Consensus 5 ~~~~~~~l~~lv-~~---ps~s~~e~~~~~~l~~~l~~~G------~~~~~~~--~-----------------~~~~nv~ 55 (393)
T 1vgy_A 5 ETQSLELAKELI-SR---PSVTPDDRDCQKLMAERLHKIG------FAAEEMH--F-----------------GNTKNIW 55 (393)
T ss_dssp CSHHHHHHHHHH-TS---CCBTTCCTTHHHHHHHHHHTTT------CEEEECC--B-----------------TTBCEEE
T ss_pred hHHHHHHHHHHh-cC---CCCCCCcHHHHHHHHHHHHHcC------CcEEEEe--c-----------------CCCcEEE
Confidence 356788888888 33 3334444578999999999998 4444321 0 1235999
Q ss_pred EEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEE
Q 007484 133 MRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPII 191 (602)
Q Consensus 133 ~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~ 191 (602)
+++ |+ +.+.|++.+|+|+||. ++|+.|+++|++++|++++.+.+.+.+++++|+
T Consensus 56 a~~-g~----~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~ 130 (393)
T 1vgy_A 56 LRR-GT----KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIA 130 (393)
T ss_dssp EEE-CS----SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEE
T ss_pred EEE-CC----CCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 998 63 2467999999999975 357889999999999999999887778899999
Q ss_pred EEEeCcccCC-ccchHHHHhhcCc-cCceeEEEEeccC
Q 007484 192 FLFNGAEELF-MLGAHGFMKAHKW-RDSVGAVINVEAS 227 (602)
Q Consensus 192 flf~~aEE~g-l~GS~~f~~~h~~-~~~i~a~INLD~~ 227 (602)
|+|+.+||.+ +.|++.+++.... ..++.+++..|..
T Consensus 131 ~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~~e~~ 168 (393)
T 1vgy_A 131 LLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPT 168 (393)
T ss_dssp EEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred EEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEEeCCC
Confidence 9999999984 7899988764321 2356777777654
No 38
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.21 E-value=3.1e-11 Score=129.86 Aligned_cols=138 Identities=18% Similarity=0.246 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHhcCCCC-------CCChhHHHHHHHHHHHHhcccccCCCcee-EEEEeeeecCcccccccccccccccc
Q 007484 55 RAIQHVRVLADEIGDRQ-------EGRPGLREAAVYIKTQLEGIKERAGPKFR-IEIEENVVNGSFNMIFLGHSISLGYR 126 (602)
Q Consensus 55 ra~~~L~~La~~ig~R~-------~gS~~~e~a~~yL~~~l~~ig~~~~~~~~-vevd~~~~~G~~~~~~~~~~~~~~y~ 126 (602)
+..+.|++|. ++.+.. ..+++++++++||.++++++| ++ ++++.
T Consensus 3 ~~~~~l~~Lv-~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G------~~~~~~~~--------------------- 54 (417)
T 1fno_A 3 KLLERFLHYV-SLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMG------LVNITLSE--------------------- 54 (417)
T ss_dssp SHHHHHHHHH-TSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHT------CEEEEECT---------------------
T ss_pred HHHHHHHHhE-EecCCCCcccCCCCCCccHHHHHHHHHHHHHHcC------CCeEEECC---------------------
Confidence 4678889998 555422 223466699999999999998 44 44321
Q ss_pred ccceEEEEEeCCCCCCCCCEEEEeeecCCCCCC------C----------------------------------------
Q 007484 127 NHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS------P---------------------------------------- 160 (602)
Q Consensus 127 ~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~------p---------------------------------------- 160 (602)
..|++++++|+++ .+.+.|++.+|+|+||.. |
T Consensus 55 -~~nvia~~~g~~~-~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~gr 132 (417)
T 1fno_A 55 -KGTLMATLPANVE-GDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTD 132 (417)
T ss_dssp -TCCEEEEECCSSC-SCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECC
T ss_pred -CceEEEEECCCCC-CCCCceEEEEeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcC
Confidence 2499999987531 124679999999999642 1
Q ss_pred CC----CCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccC
Q 007484 161 GA----GDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEAS 227 (602)
Q Consensus 161 GA----~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~ 227 (602)
|+ .||++|++++|++++.|++.+ .++++|+|+|+.+||.| .|++.+..+. + +.++.+++|..
T Consensus 133 Gat~l~~D~K~g~a~~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g-~Ga~~~~~~~-~--~~d~~i~~d~~ 198 (417)
T 1fno_A 133 GKTLLGADDKAGVAEIMTALAVLKGNP-IPHGDIKVAFTPDEEVG-KGAKHFDVEA-F--GAQWAYTVDGG 198 (417)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHSSS-CCCCCEEEEEESCGGGT-CTTTTCCHHH-H--CCSEEEECCCC
T ss_pred CccccccccHHhHHHHHHHHHHHHhCC-CCCCcEEEEEEeccccC-CChhhhchhh-c--CCCEEEEeCCC
Confidence 32 888899999999999999887 78899999999999999 8997776422 2 45678888864
No 39
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.21 E-value=1.1e-10 Score=123.11 Aligned_cols=140 Identities=19% Similarity=0.209 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEE
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~ 133 (602)
++..+.+++|. ++ +.-|..++++++||.++|+++| ++++... . .+..|+++
T Consensus 3 ~~~~~~~~~L~-~~---ps~s~~e~~~~~~l~~~l~~~g------~~~~~~~--~-----------------~~~~n~~a 53 (377)
T 3isz_A 3 EKVVSLAQDLI-RR---PSISPNDEGCQQIIAERLEKLG------FQIEWMP--F-----------------NDTLNLWA 53 (377)
T ss_dssp HHHHHHHHHHH-TS---CCBTTCCTTHHHHHHHHHHHTT------CEEEECC--B-----------------TTBCEEEE
T ss_pred hHHHHHHHHHh-cC---CCCCCChhhHHHHHHHHHHHCC------CceEEee--c-----------------CCCceEEE
Confidence 56778888888 33 2334445578999999999998 4444311 1 12469999
Q ss_pred EEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 007484 134 RISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (602)
Q Consensus 134 ~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~f 192 (602)
++ |+ +.+.|++.+|+|++|. ++|+.|+++|++++|++++.+.+.+.+++++|+|
T Consensus 54 ~~-g~----~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~ 128 (377)
T 3isz_A 54 KH-GT----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIAL 128 (377)
T ss_dssp EE-ES----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEE
T ss_pred Ee-CC----CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEE
Confidence 88 53 2468999999999984 2477799999999999999998877778899999
Q ss_pred EEeCcccCCc-cchHHHHhhcCc-cCceeEEEEeccC
Q 007484 193 LFNGAEELFM-LGAHGFMKAHKW-RDSVGAVINVEAS 227 (602)
Q Consensus 193 lf~~aEE~gl-~GS~~f~~~h~~-~~~i~a~INLD~~ 227 (602)
+|..+||.+. .|++.+++.... ..++++++..|..
T Consensus 129 ~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~~~e~~ 165 (377)
T 3isz_A 129 LITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPS 165 (377)
T ss_dssp EEESCSSSCCSSSHHHHHHHHHHTTCCCCEEEECCCC
T ss_pred EEEcccccCccccHHHHHHHHHhcCCCCCEEEEcCCC
Confidence 9999999976 699988764321 2346677766643
No 40
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.20 E-value=1.3e-10 Score=128.10 Aligned_cols=135 Identities=17% Similarity=0.105 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCC----------hhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccccccccccc
Q 007484 53 EARAIQHVRVLADEIGDRQEGR----------PGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSIS 122 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~~gS----------~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~ 122 (602)
.++..+.+++|. ++.+- .+. ++..++.+|+.++++++| ++++..
T Consensus 33 ~~~~~~~l~~lv-~ips~-s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G------~~~~~~------------------ 86 (492)
T 3khx_A 33 EDQIINDLKGLL-AIESV-RDDAKASEDAPVGPGPRKALDYMYEIAHRDG------FTTHDV------------------ 86 (492)
T ss_dssp HHHHHHHHHHHH-TSCCC-CCSSSCCSSSTTCHHHHHHHHHHHHHHHHTT------CEEEEE------------------
T ss_pred HHHHHHHHHHHh-cCCCC-CCCcccccccccchHHHHHHHHHHHHHHHcC------CcceEe------------------
Confidence 356777888887 44432 221 234589999999999999 444321
Q ss_pred ccccccceEEEEEe-CCCCCCCCCEEEEeeecCCCCC-------------------CCCCCCChhHHHHHHHHHHHHHhc
Q 007484 123 LGYRNHTNIVMRIS-STDSQDTDPSVLMNGHFDGPLS-------------------SPGAGDCGSCVASMLELARLTIDS 182 (602)
Q Consensus 123 ~~y~~~~NVi~~i~-g~~~~~~~~~vll~aH~Dsv~~-------------------~pGA~D~~sGva~~LE~ar~L~~~ 182 (602)
.|+++.++ |+ +++.|++.+|+|+||. ++|+.||++|++++|++++.|++.
T Consensus 87 ------~~~~~~~~~g~----~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~ 156 (492)
T 3khx_A 87 ------DHIAGRIEAGK----GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDM 156 (492)
T ss_dssp ------TTTEEEEEEEC----SSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHT
T ss_pred ------CCEEEEEEeCC----CCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHc
Confidence 14455554 32 2468999999999985 358999999999999999999998
Q ss_pred CCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEecc
Q 007484 183 GWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEA 226 (602)
Q Consensus 183 ~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~ 226 (602)
+.+++++|+|+|+.+||.|..|++.++++++. ....+..|.
T Consensus 157 ~~~~~~~i~~~~~~~EE~g~~g~~~~~~~~~~---~~~~~~~d~ 197 (492)
T 3khx_A 157 NVDWKKRIHMIIGTDEESDWKCTDRYFKTEEM---PTLGFAPDA 197 (492)
T ss_dssp TCCCSSEEEEEEECCTTCCCCTTSHHHHHSCC---CSEEECSSC
T ss_pred CCCCCCCEEEEEECCccCCCcCHHHHHHhCcC---CCEEEecCC
Confidence 88889999999999999999999999998752 445555553
No 41
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.19 E-value=2e-10 Score=125.29 Aligned_cols=126 Identities=17% Similarity=0.174 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCC----------hhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCcccccccccccc
Q 007484 53 EARAIQHVRVLADEIGDRQEGR----------PGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSIS 122 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~~gS----------~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~ 122 (602)
.++..+.+++|. ++.. ..+. ++..++.+||.++++++| ++++.. +
T Consensus 13 ~~~~~~~l~~l~-~ips-~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G------~~~~~~-----~------------ 67 (470)
T 1lfw_A 13 KDAILKDLEELI-AIDS-SEDLENATEEYPVGKGPVDAMTKFLSFAKRDG------FDTENF-----A------------ 67 (470)
T ss_dssp HHHHHHHHHHHH-TSCC-BCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTT------CEEEEE-----T------------
T ss_pred HHHHHHHHHHHc-CCCC-cCCCccccccCCCcHHHHHHHHHHHHHHHHcC------CeEEEe-----c------------
Confidence 467888899998 4443 2222 244689999999999998 444321 1
Q ss_pred ccccccceEEEEEeCCCCCCCCCEEEEeeecCCCCC--------------------CCCCCCChhHHHHHHHHHHHHHhc
Q 007484 123 LGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS--------------------SPGAGDCGSCVASMLELARLTIDS 182 (602)
Q Consensus 123 ~~y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~--------------------~pGA~D~~sGva~~LE~ar~L~~~ 182 (602)
..++++++ |++ .+.|++.+|+|+||. ++|+.||++|++++|++++.|++.
T Consensus 68 -----~~~~~~~~-g~~----~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~ 137 (470)
T 1lfw_A 68 -----NYAGRVNF-GAG----DKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEA 137 (470)
T ss_dssp -----TTEEEEEE-CCC----SSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHH
T ss_pred -----CeEEEEEe-CCC----CCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHc
Confidence 12667777 532 467999999999873 357799999999999999999988
Q ss_pred CCCCCCCEEEEEeCcccCCccchHHHHhhcC
Q 007484 183 GWIPPRPIIFLFNGAEELFMLGAHGFMKAHK 213 (602)
Q Consensus 183 ~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~ 213 (602)
+.+++++|+|+|+.+||.|..|++.+++++.
T Consensus 138 ~~~~~~~i~~i~~~~EE~g~~G~~~~~~~~~ 168 (470)
T 1lfw_A 138 GFKPKKKIDFVLGTNEETNWVGIDYYLKHEP 168 (470)
T ss_dssp TCCCSSEEEEEEESCTTTTCHHHHHHHHHSC
T ss_pred CCCCCCCEEEEEecCcccCCccHHHHHHhCc
Confidence 8888999999999999999999999998654
No 42
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.17 E-value=4.5e-11 Score=131.74 Aligned_cols=141 Identities=23% Similarity=0.249 Sum_probs=108.3
Q ss_pred cCcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccc
Q 007484 48 LDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRN 127 (602)
Q Consensus 48 ~~~Fs~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~ 127 (602)
..+++.++..+.+++|. ++ |++. ..++++.+||.++++++| ++++.+.
T Consensus 8 ~~~~~~~~~~~~~~~L~-~i-ps~s--~~e~~~~~~l~~~l~~~G------~~v~~~~---------------------- 55 (490)
T 3mru_A 8 ISTLSPAPLWQFFDKIC-SI-PHPS--KHEEALAQYIVTWATEQG------FDVRRDP---------------------- 55 (490)
T ss_dssp GGGSSSHHHHHHHHHHH-HS-CCBT--TCCTTHHHHHHHHHHHTT------CEEEECT----------------------
T ss_pred HhccCHHHHHHHHHHHh-CC-CCCC--CCHHHHHHHHHHHHHHcC------CEEEEcC----------------------
Confidence 45678899999999999 44 4443 345689999999999999 5544321
Q ss_pred cceEEEEEeCCCCCCCCCEEEEeeecCCCCCC------------------------CCCC---CChhHHHHHHHHHHHHH
Q 007484 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS------------------------PGAG---DCGSCVASMLELARLTI 180 (602)
Q Consensus 128 ~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~------------------------pGA~---D~~sGva~~LE~ar~L~ 180 (602)
..|++++++|+.+.++.+.|++.+|+|+||.. +|+. ||++|+|++|++++
T Consensus 56 ~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l~--- 132 (490)
T 3mru_A 56 TGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLA--- 132 (490)
T ss_dssp TCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHHH---
T ss_pred CCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHHH---
Confidence 23999999875322345779999999999753 3675 99999999998763
Q ss_pred hcCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccC
Q 007484 181 DSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEAS 227 (602)
Q Consensus 181 ~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~ 227 (602)
....++.+|.|+|+.+||.|+.|++.++++. -+.+..+|+|..
T Consensus 133 -~~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~d~~ 175 (490)
T 3mru_A 133 -SKEIKHGPIEVLLTIDEEAGMTGAFGLEAGW---LKGDILLNTDSE 175 (490)
T ss_dssp -CSSCCCCSEEEEEESCSSSTTGGGGTCCSSS---CCSSEEEECCCC
T ss_pred -hCCCCCCCEEEEEEcccccccHhHHHhhhcc---cCCCEEEEcCCC
Confidence 2345678999999999999999999987632 256789999964
No 43
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.17 E-value=1.5e-10 Score=126.79 Aligned_cols=146 Identities=18% Similarity=0.240 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCC-------hh-HHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccc
Q 007484 54 ARAIQHVRVLADEIGDRQEGR-------PG-LREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGY 125 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS-------~~-~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y 125 (602)
+++.+.+++|. ++.+- .+. .+ ++++.+|+.++|+++|.+. .++++.+ ..
T Consensus 18 ~~~~~~l~~lv-~ips~-s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~---~~~~~~~--~~---------------- 74 (472)
T 3pfe_A 18 EEILPSLCDYI-KIPNK-SPHFDAKWEEHGYMEQAVNHIANWCKSHAPKG---MTLEIVR--LK---------------- 74 (472)
T ss_dssp HTHHHHHHHHH-TCCCB-CGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTT---CEEEEEC--CT----------------
T ss_pred HHHHHHHHHHh-CCCCc-CCCccccccccchHHHHHHHHHHHHHHcCCCC---cceEEEe--cC----------------
Confidence 34667777777 44331 111 12 4589999999999998421 2233321 11
Q ss_pred cccceEEEEEeCCCCCCCCCEEEEeeecCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCC
Q 007484 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGW 184 (602)
Q Consensus 126 ~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~---------------------~pGA~D~~sGva~~LE~ar~L~~~~~ 184 (602)
....||+++++|+ +.+.|++.+|+|+||. ++|+.||++|++++|++++.|++.+.
T Consensus 75 ~~~~~v~a~~~g~----~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~ 150 (472)
T 3pfe_A 75 NRTPLLFMEIPGQ----IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGL 150 (472)
T ss_dssp TSCCEEEEEECCS----EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTC
T ss_pred CCCcEEEEEEcCC----CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCC
Confidence 1235999999873 2467999999998763 36899999999999999999998877
Q ss_pred CCCCCEEEEEeCcccCCccchHHHHhhcC-ccCceeEEEEeccC
Q 007484 185 IPPRPIIFLFNGAEELFMLGAHGFMKAHK-WRDSVGAVINVEAS 227 (602)
Q Consensus 185 ~p~~~I~flf~~aEE~gl~GS~~f~~~h~-~~~~i~a~INLD~~ 227 (602)
+++ +|+|+|..+||.|..|++.++++++ ..+++.+++.+|..
T Consensus 151 ~~~-~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~ 193 (472)
T 3pfe_A 151 PYP-RCILIIEACEESGSYDLPFYIELLKERIGKPSLVICLDSG 193 (472)
T ss_dssp CCE-EEEEEEESCGGGTSTTHHHHHHHHHHHHCCCSEEEEECCB
T ss_pred CCC-cEEEEEEeCCCCCChhHHHHHHHhHhhccCCCEEEEeCCC
Confidence 666 9999999999999999999998763 22478899999954
No 44
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.14 E-value=2.3e-10 Score=121.07 Aligned_cols=131 Identities=21% Similarity=0.285 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHhcCCCCC-C-ChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccce
Q 007484 53 EARAIQHVRVLADEIGDRQE-G-RPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTN 130 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~~-g-S~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~N 130 (602)
.+++.+.+++|. ++..... | ++++.++++||.++++ | ++++.+... ....|
T Consensus 8 ~~~~~~~l~~l~-~ips~s~~~~~~~e~~~~~~l~~~l~--G------~~~~~~~~~------------------~~~~~ 60 (369)
T 2f7v_A 8 LASTLEHLETLV-SFDTRNPPRAIAAEGGIFDYLRAQLP--G------FQVEVIDHG------------------DGAVS 60 (369)
T ss_dssp HHHHHHHHHHHH-HSCCBTTTTCCCSSSHHHHHHHTTCT--T------CEEEEEECS------------------TTCEE
T ss_pred hHHHHHHHHHHh-CCCCcCCCCCCccHHHHHHHHHHHhC--C------CceEEEEcC------------------CCceE
Confidence 467888999998 5554221 1 1244589999999999 6 555554311 12359
Q ss_pred EEEEEeCCCCCCCCCEEEEeeecCCCCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEE
Q 007484 131 IVMRISSTDSQDTDPSVLMNGHFDGPLS-------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPII 191 (602)
Q Consensus 131 Vi~~i~g~~~~~~~~~vll~aH~Dsv~~-------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~ 191 (602)
+++ ++|+ +.|++.+|+|+||. ++|+.||+.|++++|++++. ++++|+
T Consensus 61 ~~a-~~g~------~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v~ 126 (369)
T 2f7v_A 61 LYA-VRGT------PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDGDAA 126 (369)
T ss_dssp EEE-EESC------CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCCCEE
T ss_pred EEE-EcCC------CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCCCEE
Confidence 999 9863 35999999999874 35899999999999999975 678999
Q ss_pred EEEeCcccC-CccchHHHHhhcCccCceeEEEEeccC
Q 007484 192 FLFNGAEEL-FMLGAHGFMKAHKWRDSVGAVINVEAS 227 (602)
Q Consensus 192 flf~~aEE~-gl~GS~~f~~~h~~~~~i~a~INLD~~ 227 (602)
|+|+.+||. |+.|++.++++.. +.++++++|..
T Consensus 127 ~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~e~~ 160 (369)
T 2f7v_A 127 FLFSSDEEANDPRCIAAFLARGL---PYDAVLVAEPT 160 (369)
T ss_dssp EEEESCTTSSSCCHHHHHHTTCC---CCSEEEECCCS
T ss_pred EEEEeCcccCCCcCHHHHHhcCC---CCCEEEECCCC
Confidence 999999999 8999999998654 56778888864
No 45
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.14 E-value=5e-10 Score=117.53 Aligned_cols=220 Identities=15% Similarity=0.083 Sum_probs=138.6
Q ss_pred HHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEE
Q 007484 56 AIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRI 135 (602)
Q Consensus 56 a~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i 135 (602)
..+.+++|. ++.+ ++ ..++++++|+.++++++| .++++|. ..|+++++
T Consensus 7 ~~~~l~~Lv-~~~s-~s--g~e~~~~~~l~~~l~~~g------~~~~~d~----------------------~gnlia~~ 54 (346)
T 1vho_A 7 TGKLLMELS-NLDG-PS--GYETNVVSYIKSVIEPFV------DEAKTTR----------------------HGSLIGYK 54 (346)
T ss_dssp HHHHHHHHH-HSCC-BT--TCCHHHHHHHHHHHGGGC------SEEEECT----------------------TSCEEEEE
T ss_pred HHHHHHHHH-cCCC-CC--cchHHHHHHHHHHHHhhC------CEEEEec----------------------CCcEEEEE
Confidence 567899998 4432 33 334578999999999998 4454431 24999999
Q ss_pred eCCCCCCCCCEEEEeeecCCCCC---------------------------------C-----------------------
Q 007484 136 SSTDSQDTDPSVLMNGHFDGPLS---------------------------------S----------------------- 159 (602)
Q Consensus 136 ~g~~~~~~~~~vll~aH~Dsv~~---------------------------------~----------------------- 159 (602)
+|++ .+.+++++|+|+|+. .
T Consensus 55 ~g~~----~~~i~l~aH~DtV~~~v~~i~~G~l~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~ 130 (346)
T 1vho_A 55 KGKG----IGKLAFFAHVDEIGFVVSKVEGQFARLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKKV 130 (346)
T ss_dssp CCSS----SCEEEEEEECCBCCEEEEEEETTEEEEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHTS
T ss_pred cCCC----CceEEEEecCcccceEeEEecCCeEEEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcccC
Confidence 8742 367999999999941 0
Q ss_pred ------------------CC-------------------CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCc
Q 007484 160 ------------------PG-------------------AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFM 202 (602)
Q Consensus 160 ------------------pG-------------------A~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl 202 (602)
.| +.||..|+++++++++.+++.+ ++.++.++|+..||.|+
T Consensus 131 ~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~ 208 (346)
T 1vho_A 131 PTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNGKVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEETGC 208 (346)
T ss_dssp CCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETTEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSSSH
T ss_pred CChhHeEEEeccchhcCCCCCEEEEccchhhhcCeEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcccch
Confidence 01 4789999999999999997653 55789999999999999
Q ss_pred cchHHHHhhcCccCceeEEEEeccCCCCCCce----EEecCC--------CCChhhhhhhhh---cccccccccccccCC
Q 007484 203 LGAHGFMKAHKWRDSVGAVINVEASGTGGLDL----VCQSGP--------SSWPSSVYAQSA---IYPMAHSAAQDVFPV 267 (602)
Q Consensus 203 ~GS~~f~~~h~~~~~i~a~INLD~~G~gg~~~----lfq~gp--------~~~~~~~y~~~~---~~p~~~~~~~e~f~~ 267 (602)
.|++.... . -+....|.+|....++..- ....+| ++.+.+...+.+ ..|+. . ..
T Consensus 209 ~Ga~~~~~--~--i~~~~~i~~D~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~l~~~~~~~a~~~gi~~~-----~--~~ 277 (346)
T 1vho_A 209 LGALTGAY--E--INPDAAIVMDVTFASEPPFSDHIELGKGPVIGLGPVVDRNLVQKIIEIAKKHNVSLQ-----E--EA 277 (346)
T ss_dssp HHHHHTTC--C--CCCSEEEEEEEECCCCTTSCCCCCTTSCCEEECSTTSCHHHHHHHHHHHHHTTCCCE-----E--ES
T ss_pred hhHHHHhc--c--cCCCEEEEeecccccCCCCCcccccCCCceEEeCCcCCHHHHHHHHHHHHHCCCCEE-----E--Ee
Confidence 99886433 1 2234567788765432110 000111 011111111111 11110 0 11
Q ss_pred C-C-CCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHHHHhC
Q 007484 268 I-P-GDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (602)
Q Consensus 268 i-p-s~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (602)
. . ++||...+.....|+|.+++.-. .. ..||+ .|+++.+.+++..+.+.++++.+..
T Consensus 278 ~~g~ggsDa~~~~~~~~gipt~~lg~~-~~-~~Hs~---~E~~~~~dl~~~~~ll~~~~~~~~~ 336 (346)
T 1vho_A 278 VGGRSGTETDFVQLVRNGVRTSLISIP-LK-YMHTP---VEMVDPRDVEELARLLSLVAVELEV 336 (346)
T ss_dssp SCCC----CTTHHHHHTTCEEEEEEEE-CB-STTST---TEEECHHHHHHHHHHHHHHHHHCC-
T ss_pred CCCCCCchHHHHHHhCCCCcEEEEehh-hc-ccccH---HHhcCHHHHHHHHHHHHHHHHHhhh
Confidence 2 2 68998888422269999986433 33 48987 4567799999999999999987755
No 46
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.12 E-value=7.3e-10 Score=116.23 Aligned_cols=150 Identities=14% Similarity=-0.001 Sum_probs=94.0
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccCCCCCCceE------
Q 007484 162 AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGGLDLV------ 235 (602)
Q Consensus 162 A~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G~gg~~~l------ 235 (602)
+.||+.|+++++++++.+.+.+ ++.++.++++.+||.|..|++...... .....|++|+...++..-.
T Consensus 167 ~~D~k~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~~i----~~~~~i~~D~~~~~~~~~~~~~~~~ 240 (348)
T 1ylo_A 167 AFDDRLSCYLLVTLLRELHDAE--LPAEVWLVASSSEEVGLRGGQTATRAV----SPDVAIVLDTACWAKNFDYGAANHR 240 (348)
T ss_dssp THHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTTSSHHHHHHHHHH----CCSEEEEECCCCCSSTTCCSTTCCC
T ss_pred CcccHHHHHHHHHHHHHhhhcC--CCceEEEEEEcccccchhHHHHhhccc----CCCEEEEEeccccCCCCCCCccccc
Confidence 4899999999999999987643 568999999999999999988765422 2246788898765432110
Q ss_pred ---------EecCCC---CChhhhhhhhh---cccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEeecCCCcCCC
Q 007484 236 ---------CQSGPS---SWPSSVYAQSA---IYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHT 300 (602)
Q Consensus 236 ---------fq~gp~---~~~~~~y~~~~---~~p~~~~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT 300 (602)
....+. +.+.+...+.+ ..|+.. +...+++||...+.....|+|.+++.- .. ...||
T Consensus 241 ~~~~G~~i~~~~~~~~~~~~l~~~~~~~a~~~gi~~~~------~~~~~ggsDa~~~~~~~~gipt~~lg~-~~-~~~Hs 312 (348)
T 1ylo_A 241 QIGNGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPLQA------DMFSNGGTDGGAVHLTGTGVPTLVMGP-AT-RHGHC 312 (348)
T ss_dssp CTTSCCEEEEECSSCBCCHHHHHHHHHHHHHHTCCCEE------EECSSCCCHHHHHHTSTTCCCEEEEEC-CC-BSCSS
T ss_pred cCCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCCeEE------eecCCCcchHHHHHHhcCCCCEEEECc-cc-CcCCC
Confidence 000000 00011100000 011100 011346899998853225999997543 33 34898
Q ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHh
Q 007484 301 SHDTVDRLLPGSVQARGDNLFNVLKAFS 328 (602)
Q Consensus 301 ~~Dt~d~id~~~lq~~g~~~l~l~~~la 328 (602)
+ .|+++.+.+....+.+.++++.++
T Consensus 313 ~---~E~~~~~d~~~~~~ll~~~~~~l~ 337 (348)
T 1ylo_A 313 A---ASIADCRDILQMEQLLSALIQRLT 337 (348)
T ss_dssp S---CEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred c---ceEeeHHHHHHHHHHHHHHHHHhh
Confidence 7 456678999999998888887664
No 47
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.10 E-value=9.3e-10 Score=118.51 Aligned_cols=135 Identities=18% Similarity=0.207 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEE
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~ 133 (602)
++..+.+++|. ++.. -|.+++++.+||.++|+++| ++++.+. ...|+++
T Consensus 28 ~~~i~~~~~l~-~ips---~s~~e~~~~~~l~~~l~~~G------~~v~~~~---------------------~~~~l~a 76 (418)
T 1xmb_A 28 DWMVKIRRKIH-ENPE---LGYEELETSKLIRSELELIG------IKYRYPV---------------------AITGVIG 76 (418)
T ss_dssp HHHHHHHHHHH-HSCC---CTTCCHHHHHHHHHHHHHHT------CCEEEEE---------------------TTTEEEE
T ss_pred HHHHHHHHHHH-hCCC---CCCChHHHHHHHHHHHHHcC------CeeEecc---------------------CCcEEEE
Confidence 56777888887 3332 23455689999999999999 4454432 0249999
Q ss_pred EEeCCCCCCCCCEEEEeeecCCCCCCC-----------CC---CCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCccc
Q 007484 134 RISSTDSQDTDPSVLMNGHFDGPLSSP-----------GA---GDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEE 199 (602)
Q Consensus 134 ~i~g~~~~~~~~~vll~aH~Dsv~~~p-----------GA---~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE 199 (602)
+++|++ + +.|++.+|+|++|.+. |- .+..+|++++|++++.|++.+.+++++|+|+|+.+||
T Consensus 77 ~~~~~~---~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE 152 (418)
T 1xmb_A 77 YIGTGE---P-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEE 152 (418)
T ss_dssp EEESSS---S-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTT
T ss_pred EEcCCC---C-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEecccc
Confidence 998752 3 6799999999998531 21 1113899999999999998777788999999999999
Q ss_pred CCccchHHHHhhcCccCceeEEEEec
Q 007484 200 LFMLGAHGFMKAHKWRDSVGAVINVE 225 (602)
Q Consensus 200 ~gl~GS~~f~~~h~~~~~i~a~INLD 225 (602)
|..|++.++++... ++++++++++
T Consensus 153 -g~~G~~~~~~~g~~-~~~d~~i~~~ 176 (418)
T 1xmb_A 153 -GLSGAKKMREEGAL-KNVEAIFGIH 176 (418)
T ss_dssp -TTCHHHHHHHTTTT-TTEEEEEEEE
T ss_pred -ccccHHHHHHcCCc-CCCCEEEEEe
Confidence 99999999986532 3467777754
No 48
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.07 E-value=6.2e-10 Score=117.89 Aligned_cols=222 Identities=17% Similarity=0.100 Sum_probs=148.0
Q ss_pred HHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEE
Q 007484 55 RAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMR 134 (602)
Q Consensus 55 ra~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~ 134 (602)
+..+.+++|++. |.++| .++++++|+++++++++ .++++| +..|++++
T Consensus 4 ~~~~~l~~L~~i--ps~SG--~E~~v~~~l~~~l~~~g------~~~~~D----------------------~~GNli~~ 51 (355)
T 3kl9_A 4 TLFSKIKEVTEL--AAVSG--HEAPVRAYLREKLTPHV------DEVVTD----------------------GLGGIFGI 51 (355)
T ss_dssp HHHHHHHHHHTS--CCBTT--CCHHHHHHHHHHHGGGS------SEEEEC----------------------TTSCEEEE
T ss_pred HHHHHHHHHHhC--CCCCC--CHHHHHHHHHHHHHHhC------CEEEEC----------------------CCCeEEEE
Confidence 467889999843 33333 44688999999999998 445543 12499999
Q ss_pred EeCCCCCCCCCEEEEeeecCCCCC--------------------------------------------------------
Q 007484 135 ISSTDSQDTDPSVLMNGHFDGPLS-------------------------------------------------------- 158 (602)
Q Consensus 135 i~g~~~~~~~~~vll~aH~Dsv~~-------------------------------------------------------- 158 (602)
++|++ ++.+.|++.+|+|+++.
T Consensus 52 ~~g~~--~~~~~v~l~aHmD~Vg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~ 129 (355)
T 3kl9_A 52 KHSEA--VDAPRVLVASHMDEVGFMVSEIKPDGTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGG 129 (355)
T ss_dssp ECCCS--TTCCEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC------------
T ss_pred ECCcC--CCCCeEEEEeccccccceEEEECCCCEEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccChhhc
Confidence 98863 13467999999999863
Q ss_pred -----------------------------------------C------CCCCCChhHHHHHHHHHHHHHhcCCCCCCCEE
Q 007484 159 -----------------------------------------S------PGAGDCGSCVASMLELARLTIDSGWIPPRPII 191 (602)
Q Consensus 159 -----------------------------------------~------pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~ 191 (602)
. ..+-||..||++++|+++.+++. +++++++
T Consensus 130 ~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~~v~ 207 (355)
T 3kl9_A 130 PTMPAIADIVFDGGFADKAEAESFGIRPGDTIVPDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGNELY 207 (355)
T ss_dssp ---CCGGGSCEECCCSSHHHHHHTTCCTTCEEEECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSSEEE
T ss_pred cCCCChhhEEEEeccCCHHHHHHcCCCCCCEEEeccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCceEE
Confidence 0 14779999999999999999754 5789999
Q ss_pred EEEeCcccCCccchHHHHhhcCccCceeEEEEeccCCCCC-----------CceEE-ecCC--CCChhhhhhh---hhcc
Q 007484 192 FLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGG-----------LDLVC-QSGP--SSWPSSVYAQ---SAIY 254 (602)
Q Consensus 192 flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G~gg-----------~~~lf-q~gp--~~~~~~~y~~---~~~~ 254 (602)
++|+..||.|+.|++......+ ...+|.+|++-.+. +.+.. .++. ++.+.+...+ ...-
T Consensus 208 ~~ft~qEEvG~~Ga~~a~~~~~----pd~~i~~D~~~a~d~p~~~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~~~gI 283 (355)
T 3kl9_A 208 LGSNVQEEVGLRGAHTSTTKFD----PEVFLAVDCSPAGDVYGGQGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAEEAGI 283 (355)
T ss_dssp EEEESCCTTTSHHHHHHHHHHC----CSEEEEEEEEECCGGGTSSCCTTSCEEEEEEETTEECCHHHHHHHHHHHHHTTC
T ss_pred EEEECccccCcchhHHHHhccC----CCEEEEecCccCCCCCCcccccCCCcEEEEecCCCCCCHHHHHHHHHHHHHcCC
Confidence 9999999999999988765332 23478888754332 11221 1111 1112222111 1122
Q ss_pred cccccccccccCCCCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHHHHh
Q 007484 255 PMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFS 328 (602)
Q Consensus 255 p~~~~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la 328 (602)
|+.. . . ..++||-..+.....|+|..++.. ... ..||+. |.++.+.+++..+.+.++++.++
T Consensus 284 p~q~-~----~--~ggGtDa~~i~~a~~Gipt~~igv-p~~-~~Hs~~---E~~~~~Di~~~~~ll~~~l~~l~ 345 (355)
T 3kl9_A 284 KYQY-Y----C--GKGGTDAGAAHLKNGGVPSTTIGV-CAR-YIHSHQ---TLYAMDDFLEAQAFLQALVKKLD 345 (355)
T ss_dssp CEEE-E----E--CSSCCTHHHHTTSTTCCCEEEEEE-EEB-SCSSSC---EEEEHHHHHHHHHHHHHHHHTCC
T ss_pred CEEE-E----C--CCcchHHHHHHHhCCCCCEEEEcc-CcC-CCCCcc---eEeeHHHHHHHHHHHHHHHHHhC
Confidence 3322 1 1 125899888753236899998643 222 488876 56678889999998888887663
No 49
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.07 E-value=5.1e-10 Score=122.94 Aligned_cols=140 Identities=21% Similarity=0.205 Sum_probs=105.1
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccc
Q 007484 50 RFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHT 129 (602)
Q Consensus 50 ~Fs~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~ 129 (602)
+.+.++..+.+++|. ++.. + |..+.++++||.++++++| ++++.+. ..
T Consensus 7 ~~~~~~~~~~~~~l~-~ips-~--s~~e~~~~~~l~~~l~~~G------~~~~~~~----------------------~~ 54 (487)
T 2qyv_A 7 SLQPKLLWQWFDQIC-AIPH-P--SYKEEQLAQFIINWAKTKG------FFAERDE----------------------VG 54 (487)
T ss_dssp CSSSHHHHHHHHHHH-HSCC-B--TTCCHHHHHHHHHHHHHTT------CEEEECT----------------------TC
T ss_pred ccCHHHHHHHHHHHH-cCCC-C--CCcHHHHHHHHHHHHHHcC------CEEEEcC----------------------CC
Confidence 456788999999998 4433 2 3344689999999999998 4444321 24
Q ss_pred eEEEEEeCCCCCCCCCEEEEeeecCCCCCC------------------------CCCC---CChhHHHHHHHHHHHHHhc
Q 007484 130 NIVMRISSTDSQDTDPSVLMNGHFDGPLSS------------------------PGAG---DCGSCVASMLELARLTIDS 182 (602)
Q Consensus 130 NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~------------------------pGA~---D~~sGva~~LE~ar~L~~~ 182 (602)
|++++++|+...++.+.|++.+|+|++|.. +|+. |++.|++++|++++. .
T Consensus 55 nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~---~ 131 (487)
T 2qyv_A 55 NVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES---N 131 (487)
T ss_dssp CEEEEECCCTTCTTBCCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC---S
T ss_pred cEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh---C
Confidence 999999874210234679999999999853 2665 999999999999973 2
Q ss_pred CCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEeccCC
Q 007484 183 GWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (602)
Q Consensus 183 ~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G 228 (602)
+ .++++|+|+|+.+||.|..|++.++++. . +.++++++|..+
T Consensus 132 ~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~--~~d~~~~~d~~~ 173 (487)
T 2qyv_A 132 D-IAHPELEVLLTMTEERGMEGAIGLRPNW-L--RSEILINTDTEE 173 (487)
T ss_dssp S-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C--CCSEEEECCCCC
T ss_pred C-CCCCCEEEEEEeccccCCHHHHHHHHhc-c--CCCEEEEEccCC
Confidence 3 3678999999999999999999987643 2 367788988754
No 50
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.05 E-value=1.4e-09 Score=116.57 Aligned_cols=137 Identities=22% Similarity=0.205 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEE
Q 007484 53 EARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (602)
Q Consensus 53 ~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi 132 (602)
.++..+.+++|. ++.. -|.+++++.+||.++++++| ++++.+. ....|++
T Consensus 31 ~~~~i~~~~~l~-~ips---~s~~e~~~~~~l~~~l~~~G------~~v~~~~--------------------~~~~nv~ 80 (404)
T 1ysj_A 31 HTRLINMRRDLH-EHPE---LSFQEVETTKKIRRWLEEEQ------IEILDVP--------------------QLKTGVI 80 (404)
T ss_dssp HHHHHHHHHHHH-HSCC---CTTCCHHHHHHHHHHHHHTT------CEECCCT--------------------TCSSCEE
T ss_pred HHHHHHHHHHHH-hcCC---CCCChHHHHHHHHHHHHHcC------CceEEec--------------------cCCceEE
Confidence 456778888887 3332 33455689999999999998 4433221 0135999
Q ss_pred EEEeCCCCCCCCCEEEEeeecCCCCCCC-----------C---CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcc
Q 007484 133 MRISSTDSQDTDPSVLMNGHFDGPLSSP-----------G---AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAE 198 (602)
Q Consensus 133 ~~i~g~~~~~~~~~vll~aH~Dsv~~~p-----------G---A~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aE 198 (602)
++++|++ +.+.|++.+|+|+||.+. | +.+.++|++++|++++.|++.+.+++++|+|+|+.+|
T Consensus 81 a~~~g~~---~~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~E 157 (404)
T 1ysj_A 81 AEIKGRE---DGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAE 157 (404)
T ss_dssp EEEECSS---CCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCT
T ss_pred EEEeCCC---CCCEEEEEEecccccCCCCCCCCcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEeccc
Confidence 9998753 246899999999998531 2 1223589999999999999876678899999999999
Q ss_pred cCCccchHHHHhhcCccCceeEEEEe
Q 007484 199 ELFMLGAHGFMKAHKWRDSVGAVINV 224 (602)
Q Consensus 199 E~gl~GS~~f~~~h~~~~~i~a~INL 224 (602)
|. ..|++.++++. ..+++.+++.+
T Consensus 158 E~-~~G~~~~~~~g-~~~~~d~~i~~ 181 (404)
T 1ysj_A 158 EI-AAGARKVLEAG-VLNGVSAIFGM 181 (404)
T ss_dssp TT-TCHHHHHHHTT-TTTTEEEEEEE
T ss_pred cc-chhHHHHHhcC-CCcCCCEEEEE
Confidence 99 78999998853 23456666666
No 51
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.05 E-value=4.5e-10 Score=117.22 Aligned_cols=221 Identities=12% Similarity=-0.033 Sum_probs=136.6
Q ss_pred HHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEE
Q 007484 56 AIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRI 135 (602)
Q Consensus 56 a~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i 135 (602)
..+.+++|+ ++.+ .|..+++.++|+.++++++|.+. ++|.....+ .+..|+++++
T Consensus 19 ~~~~l~~Lv-~i~s---~sg~e~~v~~~l~~~l~~~g~~v------~~d~~~~~~---------------~~~gnlia~~ 73 (321)
T 3cpx_A 19 GMQLLKELC-SIHA---PSGNEEPLKDFILEYIRSNAGSW------SYQPVIYAD---------------NDLQDCIVLV 73 (321)
T ss_dssp HHHHHHHHH-HSCC---BTTCCHHHHHHHHHHHHHHGGGS------SSCCEEECS---------------GGGTTCEEEE
T ss_pred HHHHHHHHH-cCCC---CCCCHHHHHHHHHHHHHhhCCeE------EEccccccc---------------cCCccEEEEe
Confidence 678899999 4433 33344577999999999999533 222211111 1235999998
Q ss_pred eCCCCCCCCCEEEEeeecCCCC----------------------------C----------------------CCC----
Q 007484 136 SSTDSQDTDPSVLMNGHFDGPL----------------------------S----------------------SPG---- 161 (602)
Q Consensus 136 ~g~~~~~~~~~vll~aH~Dsv~----------------------------~----------------------~pG---- 161 (602)
+| + +.+++.+|+|+++ . .+|
T Consensus 74 ~g-~-----~~ill~aH~DtV~~~v~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~ 147 (321)
T 3cpx_A 74 FG-N-----PRTAVFAHMDSIGFTVSYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVT 147 (321)
T ss_dssp ES-S-----CSEEEEEECCBCEEEECSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEE
T ss_pred cC-C-----ceEEEEecCCcCCeEecccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEE
Confidence 76 1 3499999999983 0 022
Q ss_pred ---------------CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEecc
Q 007484 162 ---------------AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEA 226 (602)
Q Consensus 162 ---------------A~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~ 226 (602)
+.||++|+++++++++.+. + +.++|++.||.|+.|++....-....-+..+.|++|+
T Consensus 148 ~~~~~~~~~g~i~~~~~D~k~G~aa~l~al~~l~-------~-i~~~~t~~EEvG~~Ga~~a~~~~~~~~~~~~~i~~D~ 219 (321)
T 3cpx_A 148 FKPDFREEGDFILTPYLDDRLGVWTALELAKTLE-------H-GIIAFTCWEEHGGGSVAYLARWIYETFHVKQSLICDI 219 (321)
T ss_dssp ECCCCEEETTEEECTTHHHHHHHHHHHHHTTTCC-------S-EEEEEESSTTTTCCSHHHHHHHHHHHHCCCEEEECCC
T ss_pred eccCcEEEcCEEEEcCCcCHHHHHHHHHHHHHhc-------C-cEEEEECCccCchhcchhhhhccccccCCCEEEEEeC
Confidence 5899999999999998754 2 8999999999999999863210000123467899998
Q ss_pred CCCCC-------CceEEecCCC--CChhhhhhhhh---cccccccccccccCCCCCCCchHHHhhcCCCCcEEEEEeecC
Q 007484 227 SGTGG-------LDLVCQSGPS--SWPSSVYAQSA---IYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIG 294 (602)
Q Consensus 227 ~G~gg-------~~~lfq~gp~--~~~~~~y~~~~---~~p~~~~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~ 294 (602)
...+. ..+....++. +.+.+...+.+ .-|+. .+...+++||-..+.....|+|.+++....
T Consensus 220 ~~~~~~~~~~~G~~i~~~~~~~~~~~l~~~~~~~a~~~gi~~q------~~~~~~GGsD~~~~~~s~~Gipt~~lG~~~- 292 (321)
T 3cpx_A 220 TWVTEGVEAGKGVAISMRDRMIPRKKYVNRIIELARQTDIPFQ------LEVEGAGASDGRELQLSPYPWDWCFIGAPE- 292 (321)
T ss_dssp EECCSSSCTTSCEEEEEESSSCCCHHHHHHHHHHHTTSSCCEE------EEECSSCCCHHHHHHHSSSCCBCCBEECEE-
T ss_pred ccccCCcccCCCcEEEECCCCCCCHHHHHHHHHHHHHcCCCEE------EEeCCCCCccHHHHHHhCCCCCEEEEchhh-
Confidence 75432 1121111111 11111111111 11111 111245789988874323799999765433
Q ss_pred CCcCCCcccccCCCCHHHHHHHHHHHHHHHHH
Q 007484 295 GYYYHTSHDTVDRLLPGSVQARGDNLFNVLKA 326 (602)
Q Consensus 295 ~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~ 326 (602)
...||+. |+++.+.++...+.+.++++.
T Consensus 293 -~~~Hs~~---E~~~~~dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 293 -KDAHTPN---ECVHKKDIESMVGLYKYLMEK 320 (321)
T ss_dssp -BSTTSTT---CEEEHHHHHHHHHHHHHHHHH
T ss_pred -cccchhh---hheeHHHHHHHHHHHHHHHHh
Confidence 3579865 456688888888888887764
No 52
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=98.94 E-value=2.3e-09 Score=114.69 Aligned_cols=140 Identities=17% Similarity=0.048 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEE
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~ 133 (602)
++..+.+++|.+ .+.-|.++.++.+||.++|+++| ++++.+. .| ..+|+++
T Consensus 16 ~~~~~~~~~l~~----~pe~s~~E~~~~~~i~~~l~~~G------~~v~~~~---~g----------------~~~~via 66 (394)
T 3ram_A 16 YSYIEISHRIHE----RPELGNEEIFASRTLIDRLKEHD------FEIETEI---AG----------------HATGFIA 66 (394)
T ss_dssp HHHHHHHHHHHH----SCCCTTCCHHHHHHHHHHHHHTT------CEEEEEE---TT----------------EEEEEEE
T ss_pred HHHHHHHHHHHh----CCCCCcchHHHHHHHHHHHHHcC------CeEEeCC---CC----------------CceEEEE
Confidence 456666666663 23455666799999999999999 5555432 11 2359999
Q ss_pred EEeCCCCCCCCCEEEEeeecCCCCCC-CCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCC-ccchH-HHHh
Q 007484 134 RISSTDSQDTDPSVLMNGHFDGPLSS-PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELF-MLGAH-GFMK 210 (602)
Q Consensus 134 ~i~g~~~~~~~~~vll~aH~Dsv~~~-pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~g-l~GS~-~f~~ 210 (602)
+++|.+ +.+.|++.+|+|++|.- .+.+.| .-.+++|.+++.|++.+.+++++|.|+|+.+||.| ..|++ .+++
T Consensus 67 ~~~g~~---~g~~i~l~ah~D~vpg~~ha~G~d-~~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~ 142 (394)
T 3ram_A 67 TYDSGL---DGPAIGFLAEYDALPGLGHACGHN-IIGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVK 142 (394)
T ss_dssp EEECSS---SSCEEEEEECCCCCTTTSSTTCHH-HHHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHH
T ss_pred EEeCCC---CCCEEEEEEecccCCCcceECCcc-HHHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHH
Confidence 998853 34789999999999932 122223 33467888999998765568899999999999998 58999 7777
Q ss_pred hcCccCceeEEEEeccC
Q 007484 211 AHKWRDSVGAVINVEAS 227 (602)
Q Consensus 211 ~h~~~~~i~a~INLD~~ 227 (602)
+. ..+++++++.++..
T Consensus 143 ~g-~~~~~d~~~~~h~~ 158 (394)
T 3ram_A 143 AG-VIDQIDIALMIHPG 158 (394)
T ss_dssp HT-GGGGCSEEECCEEE
T ss_pred cC-CcccCCEEEEECCc
Confidence 43 33567888888753
No 53
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=98.82 E-value=7.7e-08 Score=101.73 Aligned_cols=219 Identities=14% Similarity=0.113 Sum_probs=141.6
Q ss_pred HHHHHHHHHHhcCCCCCCChhHH-HHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEE
Q 007484 56 AIQHVRVLADEIGDRQEGRPGLR-EAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMR 134 (602)
Q Consensus 56 a~~~L~~La~~ig~R~~gS~~~e-~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~ 134 (602)
..+.+++|++. |.++| .++ ++++|+++++++++ .++++|. ..|++++
T Consensus 11 ~~~~l~~L~~i--pspSG--~E~~~v~~~l~~~l~~~g------~~~~~D~----------------------~GNvi~~ 58 (354)
T 2vpu_A 11 DWKLMQEIIEA--PGVSG--YEHLGIRDIVVDVLKEVA------DEVKVDK----------------------LGNVIAH 58 (354)
T ss_dssp CHHHHHHHHHS--CCBTT--CGGGTHHHHHHHHHHTTC------SEEEECT----------------------TCCEEEE
T ss_pred HHHHHHHHHhC--CCCCc--ccHHHHHHHHHHHHHHhC------CEEEEcC----------------------CCeEEEE
Confidence 56789999943 43444 445 78999999999998 4455432 2499999
Q ss_pred EeCCCCCCCCCEEEEeeecCCCCC--------------------------------------------------------
Q 007484 135 ISSTDSQDTDPSVLMNGHFDGPLS-------------------------------------------------------- 158 (602)
Q Consensus 135 i~g~~~~~~~~~vll~aH~Dsv~~-------------------------------------------------------- 158 (602)
++|++ +.|++.+|+|+++.
T Consensus 59 ~~g~~-----~~v~l~aHmDtVg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~Gvi~~~~~H~~~~~~~~ 133 (354)
T 2vpu_A 59 FKGSS-----PRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQEDK 133 (354)
T ss_dssp ECCSS-----SEEEEECCCCBCEEEEEEECTTSCEEEEEESSCCGGGGTTCEEEEEETTEEEEEEECCCCSTTC------
T ss_pred EcCCC-----CEEEEEecccccceeEEEECCCCEEEEEccCCcccccccCCEEEEEcCCCcEEEEEcCCCccccCccccc
Confidence 98742 57999999999863
Q ss_pred ----------------------------------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 007484 159 ----------------------------------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (602)
Q Consensus 159 ----------------------------------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~f 192 (602)
...+-||..||++++|+++.+++ ++.++++
T Consensus 134 ~~~~~~~~l~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~----~~~~v~~ 209 (354)
T 2vpu_A 134 GSKIDWDQIVVDVGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLGD----HEADIYI 209 (354)
T ss_dssp ---CCGGGCCEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCC----CSSEEEE
T ss_pred ccCCCcceEEEEecCCCHHHHHhcCCCCCCEEEEeeEEEEeCCceEEEecCccHHHHHHHHHHHHHhhc----CCCeEEE
Confidence 02588999999999999998753 6789999
Q ss_pred EEeCcccCCccchHHHHhhcCccCceeEEEEeccCCCCCCce------------EEecCCC--CChhhhhhhh---hccc
Q 007484 193 LFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGGLDL------------VCQSGPS--SWPSSVYAQS---AIYP 255 (602)
Q Consensus 193 lf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~~G~gg~~~------------lfq~gp~--~~~~~~y~~~---~~~p 255 (602)
+|++-||.|+.|++...... .. ..+|.+|++-.+.+.. ....+.. +.+.+...+. ..-|
T Consensus 210 ~ft~qEEVG~~ga~~aa~~i--~p--d~~i~~Dv~~a~dp~~~~~~~~~lg~Gpv~d~~~~~~~~l~~~l~~~a~~~gIp 285 (354)
T 2vpu_A 210 VGSVQEEVGLRGARVASYAI--NP--EVGIAMDVTFAKQPHDKGKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIP 285 (354)
T ss_dssp EECSCCTTTSHHHHHHHHHH--CC--SEEEEEEEEECCCTTSTTCCCCCTTSCCEEEESTTSCHHHHHHHHHHHHHTTCC
T ss_pred EEECCcccCccchhhhhccc--CC--CEEEEecccccCCCCcccccCceECCcceEcCCCCCCHHHHHHHHHHHHHcCCC
Confidence 99999999999988765422 12 2577777643222211 1111110 1111111111 1112
Q ss_pred ccccccccccCCCCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHHHHhC
Q 007484 256 MAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (602)
Q Consensus 256 ~~~~~~~e~f~~ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (602)
+... . ...+++||-..+.....|+|..++..- .. ..||+. |.++.+.+++..+.+.++++.++.
T Consensus 286 ~q~~----~-~~g~gGtDa~~i~~a~~Gipt~~Igvp-~~-~~Hs~~---E~~~~~D~~~~~~ll~~~l~~l~~ 349 (354)
T 2vpu_A 286 LQVE----P-SPRPTGTDANVMQINKEGVATAVLSIP-IR-YMHSQV---ELADARDVDNTIKLAKALLEELKP 349 (354)
T ss_dssp CEEE----E-CCSCCSSTHHHHHTSTTCCEEEEEEEE-EB-STTSTT---CEEEHHHHHHHHHHHHHHHHHCCC
T ss_pred cEEE----e-CCCCCccHHHHHHHhcCCCCEEEECcc-cc-cCcCcc---eEeeHHHHHHHHHHHHHHHHhccH
Confidence 2110 0 011258998887532368999986532 22 378875 456688899999999998887644
No 54
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=98.77 E-value=4.1e-08 Score=106.64 Aligned_cols=158 Identities=18% Similarity=0.147 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeec-Cc-cccc-----------cc--c
Q 007484 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVN-GS-FNMI-----------FL--G 118 (602)
Q Consensus 54 era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~-G~-~~~~-----------~~--~ 118 (602)
++..+..++|- ..+.-+..+.++.+||.++|+++| ++++......+ +. ..++ .+ +
T Consensus 14 ~~~~~~~~~lh----~~Pe~~~~E~~t~~~i~~~L~~~G------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 83 (445)
T 3io1_A 14 PSMTQWRRDFH----LHAESGWLEFRTASKVADILDGLG------YQLALGRDVIDADSRMGLPDEETLARAFERAREQG 83 (445)
T ss_dssp HHHHHHHHHHH----HTCCCTTCCHHHHHHHHHHHHHTT------CEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHH----hCCCCCCcHHHHHHHHHHHHHHCC------CeEEecccccccccccccccchhhhhhhhhhcccc
Confidence 34455555555 233445566689999999999999 55443210000 00 0000 00 0
Q ss_pred -ccccccc--cccceEEEEEeCCCCCCCCCEEEEeeecCCCCCC------------------CCCC---CChhHHHHHHH
Q 007484 119 -HSISLGY--RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS------------------PGAG---DCGSCVASMLE 174 (602)
Q Consensus 119 -~~~~~~y--~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~~~------------------pGA~---D~~sGva~~LE 174 (602)
.+..... ...+|++++++|.+ +.+.|++.+|+|++|.. +|.. +...+++++|.
T Consensus 84 ~~~~~~~~~~~~~~~vva~~~~~~---~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~ 160 (445)
T 3io1_A 84 APERWLPAFEGGFAGVVATLDTGR---PGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLG 160 (445)
T ss_dssp CCTTTGGGGTTTCCCEEEEEECSS---CCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHH
T ss_pred ccccccccccCCCCEEEEEEeCCC---CCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHH
Confidence 0000000 14579999998753 34789999999999841 1211 11246999999
Q ss_pred HHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhcCccCceeEEEEecc
Q 007484 175 LARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEA 226 (602)
Q Consensus 175 ~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h~~~~~i~a~INLD~ 226 (602)
+++.|++.+.+++++|+|+|..+|| +..|++.++++. ..+++++++.++.
T Consensus 161 aa~~L~~~~~~~~g~v~l~f~p~EE-~~~Ga~~~i~~g-~~~~~d~~~~~h~ 210 (445)
T 3io1_A 161 LAHVLKQYAAQLNGVIKLIFQPAEE-GTRGARAMVAAG-VVDDVDYFTAIHI 210 (445)
T ss_dssp HHHHHHHTGGGCCSEEEEEEESCTT-TTCHHHHHHHTT-TTTTCSEEEEEEE
T ss_pred HHHHHHhCcCcCCceEEEEEecccc-ccchHHHHHHcC-CccccceeEEEec
Confidence 9999998777789999999999999 668999998853 3356788887764
No 55
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.50 E-value=1.2e-06 Score=92.09 Aligned_cols=217 Identities=18% Similarity=0.186 Sum_probs=133.0
Q ss_pred HHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEE
Q 007484 56 AIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRI 135 (602)
Q Consensus 56 a~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i 135 (602)
+.+.+++|++. |.++| .++++++|+++++++++ .++++| +..|+++++
T Consensus 13 ~~~~l~~L~~~--pspSG--~E~~v~~~i~~~l~~~~------~e~~~D----------------------~~Gnvi~~~ 60 (343)
T 3isx_A 13 MKELIRKLTEA--FGPSG--REEEVRSIILEELEGHI------DGHRID----------------------GLGNLIVWK 60 (343)
T ss_dssp CHHHHHHHHHS--CCBTT--CCHHHHHHHHHHHTTTC------SEEEEC----------------------TTCCEEEEE
T ss_pred HHHHHHHHHhC--CCCCC--chHHHHHHHHHHHHHhC------CEEEEC----------------------CCCCEEEEE
Confidence 46788999853 44444 44588999999999998 345543 234999988
Q ss_pred eCCCCCCCCCEEEEeeecCCCCC---------------------------------------------------------
Q 007484 136 SSTDSQDTDPSVLMNGHFDGPLS--------------------------------------------------------- 158 (602)
Q Consensus 136 ~g~~~~~~~~~vll~aH~Dsv~~--------------------------------------------------------- 158 (602)
|+ +.+.|++.||+|++..
T Consensus 61 -g~----~~~~v~l~aHmDevG~mV~~I~~~G~l~~~~vGG~~~~~~~~~~v~i~t~~~Gvig~~~~H~~~~~~~~~~~~ 135 (343)
T 3isx_A 61 -GS----GEKKVILDAHIDEIGVVVTNVDDKGFLTIEPVGGVSPYMLLGKRIRFENGTIGVVGMEGETTEERQENVRKLS 135 (343)
T ss_dssp -CC----CSSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCHHHHTTCEEEETTSCEEEEEECCCSHHHHHHHHHTCC
T ss_pred -CC----CCCEEEEEecccccceEEEEECCCCeEEEEecCCcCccccCCcEEEEeccEEEEEecccccccChhhcccCCC
Confidence 42 2367999999999752
Q ss_pred ---------------------------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCccc
Q 007484 159 ---------------------------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEE 199 (602)
Q Consensus 159 ---------------------------------------~pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE 199 (602)
...+-||..||++++|+++.+++ +.+++++|+.-||
T Consensus 136 ~~~l~iD~g~~s~ee~~~~I~vGd~v~~~~~~~~~~~~i~s~~lDdR~g~~~~l~~l~~l~~-----~~~~~~~ft~qEE 210 (343)
T 3isx_A 136 FDKLFIDIGANSREEAQKMCPIGSFGVYDSGFVEVSGKYVSKAMDDRIGCAVIVEVFKRIKP-----AVTLYGVFSVQEE 210 (343)
T ss_dssp GGGEEEECSCSSHHHHHHHSCTTCEEEESCCCEEETTEEEESCHHHHHHHHHHHHHHHHCCC-----SSEEEEEEECCCC
T ss_pred cceEEEEeCCCCHHHHHhcCCCCCEEEecCceEEeccEEEeccCccHHHHHHHHHHHHhccC-----CCeEEEEEECCcc
Confidence 01588999999999999998742 6899999999999
Q ss_pred CCccchHHHHhhcCccCceeEEEEeccCCCCC-CceEEec----CCCCChhhhhhhh-hccccc----ccccccc---c-
Q 007484 200 LFMLGAHGFMKAHKWRDSVGAVINVEASGTGG-LDLVCQS----GPSSWPSSVYAQS-AIYPMA----HSAAQDV---F- 265 (602)
Q Consensus 200 ~gl~GS~~f~~~h~~~~~i~a~INLD~~G~gg-~~~lfq~----gp~~~~~~~y~~~-~~~p~~----~~~~~e~---f- 265 (602)
.|+.|++...... .. ..+|.+|+.-.+. +..--+. +.++ .++.+.++ ..+|.. ...+++. +
T Consensus 211 VG~~Ga~~aa~~i--~p--d~~i~vDv~~a~d~p~~~~~~~~~lg~Gp-vI~~~d~~~~~d~~l~~~l~~~A~~~gIp~Q 285 (343)
T 3isx_A 211 VGLVGASVAGYGV--PA--DEAIAIDVTDSADTPKAIKRHAMRLSGGP-ALKVKDRASISSKRILENLIEIAEKFDIKYQ 285 (343)
T ss_dssp TTSCCSTTTGGGC--CC--SEEEEEEEEECCCSTTCCCTTCCCTTSCC-EEECBTTCCHHHHHHHHHHHHHHHHTTCCCE
T ss_pred cCchhHHHHhhcC--CC--CEEEEEeCcCCCCCCCcccccccccCCCc-EEEEcCCCCCCCHHHHHHHHHHHHHCCCCeE
Confidence 9999998655432 12 3577888653322 1110000 0001 11111110 000000 0011110 0
Q ss_pred -CCC-CCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHH
Q 007484 266 -PVI-PGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVL 324 (602)
Q Consensus 266 -~~i-ps~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~ 324 (602)
... .++||-..+.....|+|..++..-. . ..||+.. .++.+.++++.+.+.+++
T Consensus 286 ~~v~~ggGTDa~~i~~a~~Gipt~~Igvp~-r-~~Hs~~E---~~~~~Di~~~~~ll~~~l 341 (343)
T 3isx_A 286 MEVLTFGGTNAMGYQRTREGIPSATVSIPT-R-YVHSPSE---MIAPDDVEATVDLLIRYL 341 (343)
T ss_dssp ECCCBCCCSSHHHHHHHTSSCCEEEEEEEE-B-STTSTTE---EECHHHHHHHHHHHHHHH
T ss_pred EecCCCCchHHHHHHHhcCCCCEEEEcccc-c-cccchhh---EecHHHHHHHHHHHHHHH
Confidence 111 2589987764323689999875332 2 3788754 556778888877776665
No 56
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=98.30 E-value=1.6e-05 Score=80.27 Aligned_cols=58 Identities=12% Similarity=0.068 Sum_probs=43.4
Q ss_pred CCCCCchHHHhhcCCCCcEEEEEeecCCCcCCCcccccCCCCHHHHHHHHHHHHHHHHHHhCC
Q 007484 268 IPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNS 330 (602)
Q Consensus 268 ips~tD~~~F~~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~a 330 (602)
.+++||-..|.....|+|.+.+... .. ..||+. |+++.+.+++..+.+.+++++|...
T Consensus 293 ~~ggTDa~~~~~~~~Giptv~~G~g-~~-~~Ht~~---E~v~i~dl~~~~~ll~~~i~~L~~~ 350 (354)
T 2wzn_A 293 RPTGTDANVMQINKEGVATAVLSIP-IR-YMHSQV---ELADARDVDNTIKLAKALLEELKPM 350 (354)
T ss_dssp SCCSSHHHHHHTSTTCCEEEEEEEE-EB-STTSTT---CEEEHHHHHHHHHHHHHHHHHCCCC
T ss_pred cccccHHHHHHHhcCCCCEEEECcc-cC-CCCccc---EEEEHHHHHHHHHHHHHHHHhCccc
Confidence 3568998876422268999987654 33 369975 6777899999999999999988653
No 57
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.79 E-value=0.0075 Score=65.32 Aligned_cols=43 Identities=21% Similarity=0.203 Sum_probs=39.7
Q ss_pred ccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccc
Q 007484 51 FSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKE 93 (602)
Q Consensus 51 Fs~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~ 93 (602)
++.+++++++++|++.+|+|..||++++++++|+.++|++.|.
T Consensus 18 ~~~~~~~~~l~~l~~~~G~R~~GS~g~~~a~~~i~~~l~~~G~ 60 (444)
T 3iib_A 18 QSSSLGYDIVESLTVEVGPRLAGSEQDKVAVDWAIAKLQSLGF 60 (444)
T ss_dssp HHCCHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred hcccHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHcCC
Confidence 4456899999999988999999999999999999999999984
No 58
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=94.41 E-value=0.05 Score=58.23 Aligned_cols=44 Identities=20% Similarity=0.300 Sum_probs=40.4
Q ss_pred cCcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccc
Q 007484 48 LDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKE 93 (602)
Q Consensus 48 ~~~Fs~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~ 93 (602)
...+++++++++++.|++. +|..||++++++++|+.++++++|.
T Consensus 10 ~~~i~~~~~~~~l~~Ls~~--~R~~Gs~g~~~a~~yi~~~~~~~Gl 53 (421)
T 2ek8_A 10 TKRTDAENMYNTIQFLSQA--PRVAGSPEELKAVRYIEQQFKSYGY 53 (421)
T ss_dssp HTTCCHHHHHHHHHHHTTS--CCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred HhhCCHHHHHHHHHHHhCC--CCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 4578999999999999954 9999999999999999999999994
No 59
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=87.77 E-value=0.14 Score=57.82 Aligned_cols=45 Identities=16% Similarity=0.313 Sum_probs=39.5
Q ss_pred cccHHHHHHHHHHHHH-hcCCCCCCChhHHHHHHHHHHHHhccccc
Q 007484 50 RFSEARAIQHVRVLAD-EIGDRQEGRPGLREAAVYIKTQLEGIKER 94 (602)
Q Consensus 50 ~Fs~era~~~L~~La~-~ig~R~~gS~~~e~a~~yL~~~l~~ig~~ 94 (602)
.+++++.++||+.|++ ++++|..||++++++++||.+++++.|.+
T Consensus 14 ~i~~~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~ 59 (640)
T 3kas_A 14 KLDSTDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLS 59 (640)
T ss_dssp HHHTCCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCS
T ss_pred hCCHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCc
Confidence 3566789999999995 36899999999999999999999999954
No 60
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=87.23 E-value=0.54 Score=53.71 Aligned_cols=43 Identities=14% Similarity=0.039 Sum_probs=39.2
Q ss_pred CcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcccc
Q 007484 49 DRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKE 93 (602)
Q Consensus 49 ~~Fs~era~~~L~~La~~ig~R~~gS~~~e~a~~yL~~~l~~ig~ 93 (602)
..+++++++++|+.|++. ||..||+++.++++|+++++++.|.
T Consensus 20 ~~~~~~~i~~~l~~lt~~--ph~aGt~~~~~~a~yi~~~~~~~Gl 62 (707)
T 3fed_A 20 SEMKAENIKSFLRSFTKL--PHLAGTEQNFLLAKKIQTQWKKFGL 62 (707)
T ss_dssp HHCCHHHHHHHHHHHSSS--CCCTTSHHHHHHHHHHHHHHHHHTC
T ss_pred HhCCHHHHHHHHHHHhcC--CCcCCCHhHHHHHHHHHHHHHHcCC
Confidence 467899999999999943 9999999999999999999999994
No 61
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=86.08 E-value=0.79 Score=49.23 Aligned_cols=144 Identities=10% Similarity=-0.011 Sum_probs=80.4
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHHHhhc-Cc-cCce-------------eEEEEe
Q 007484 160 PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAH-KW-RDSV-------------GAVINV 224 (602)
Q Consensus 160 pGA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f~~~h-~~-~~~i-------------~a~INL 224 (602)
..+-||..||+++||+++.+. +++.++.++| +-||.|..|++.-.... +. .+++ ..+|..
T Consensus 231 s~~lDdr~~~~~~l~al~~~~----~~~~~v~~~f-d~EEVGs~ga~gA~s~~~~~~l~ri~~~~~~~~~~~~~s~~is~ 305 (428)
T 2ijz_A 231 GARLDNLLSCHAGLEALLNAE----GDENCILVCT-DHEEVGSCSHCGADGPFLEQVLRRLLPEGDAFSRAIQRSLLVSA 305 (428)
T ss_dssp CCCSSCSSTTTTTTTHHHHTT----SCSSSCEEEE-CBSCTTTTCHHHHSSCCTTTSCCSSSSSSSSSTTTTTSCCEEEE
T ss_pred eecCccHHHHHHHHHHHHhcc----cCCceEEEEE-eccccCccchhhhhccccHHHHHHhhhhhhHHHhhhhcCEEEEE
Confidence 468899999999999998764 3567888887 99999999998765432 10 1111 678888
Q ss_pred ccCCCCCCceE--Ee--cCCC---CChhhhhhh--hhcccccc----cccc------cccCC---CCCCCchHHHhhcCC
Q 007484 225 EASGTGGLDLV--CQ--SGPS---SWPSSVYAQ--SAIYPMAH----SAAQ------DVFPV---IPGDTDYRIFSQDYG 282 (602)
Q Consensus 225 D~~G~gg~~~l--fq--~gp~---~~~~~~y~~--~~~~p~~~----~~~~------e~f~~---ips~tD~~~F~~~~~ 282 (602)
|++-...+..- .+ ..|. ...++.+.+ ...++-.. .+++ ..+-. .+++||-.++.....
T Consensus 306 Dv~ha~~Pn~~~~~~~~~~~~lg~G~vIk~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q~~~~~~d~~gGsd~g~i~~~~~ 385 (428)
T 2ijz_A 306 DNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQSFVTRSDMGCGSTIGPITASQV 385 (428)
T ss_dssp CCCCCCCSSCGGGCCSSCCCSSSCCCBCCCCSSSCCSCCHHHHTTTTHHHHHTCCCCCBCCCCSSCCCCCCCSTTTGGGG
T ss_pred ecccccCCCCcccccccCCcccCCCcEEEEECCCCCCCCHHHHHHHHHHHHHcCCCeEEEEEeCCCCccchHHHHHHhCC
Confidence 87544333211 10 0000 001122111 00111000 0111 11111 456888777753236
Q ss_pred CCcEEEEEeecCCCcCCCcccccCCCCH
Q 007484 283 DIPGLDIIFLIGGYYYHTSHDTVDRLLP 310 (602)
Q Consensus 283 GIPgld~a~~~~~~~YHT~~Dt~d~id~ 310 (602)
|+|.+|+.. .--.-||+..+...-|.
T Consensus 386 Gi~tvdiGi--p~~~mHS~~E~~~~~D~ 411 (428)
T 2ijz_A 386 GVRTVDIGL--PTFAMHSIRELAGSHDL 411 (428)
T ss_dssp SCCEEEECC--CCCSCSSSSCCCCSSHH
T ss_pred CCCEEEEch--hhcccchHHHHhhHHHH
Confidence 999999743 22257898877765553
No 62
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=75.73 E-value=0.91 Score=49.22 Aligned_cols=44 Identities=20% Similarity=0.187 Sum_probs=37.6
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHH
Q 007484 161 GAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGF 208 (602)
Q Consensus 161 GA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f 208 (602)
++-||..||.++||+++.+. .+++++++++++-||.|..|+++-
T Consensus 258 ~~lDdr~~~~~~l~al~~~~----~~~~~~~~~~~d~EEVGs~ga~ga 301 (461)
T 2glj_A 258 YGQDDRICAYTSFEAMLEMK----NAKKTCITILVDKEEVGSIGATGM 301 (461)
T ss_dssp TTHHHHHHHHHHHHHHHTCC----SCSSCEEEEEECCGGGTCCTTTTS
T ss_pred ecchhHHHHHHHHHHHHhhc----cCCCeEEEEEEccCCCCCcccccc
Confidence 57899999999999988653 467899999999999999887653
No 63
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=73.80 E-value=1.5 Score=47.36 Aligned_cols=42 Identities=24% Similarity=0.225 Sum_probs=36.1
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHH
Q 007484 161 GAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHG 207 (602)
Q Consensus 161 GA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~ 207 (602)
++-||-.||.+++|+++.+ .++.++++++++-||.|..|++.
T Consensus 246 ~~lDnr~~~~~~l~al~~~-----~~~~~~~~~~~d~EEVGs~ga~g 287 (450)
T 2glf_A 246 YGQDDRICAYTALRALLSA-----NPEKSIGVIFFDKEEIGSDGNTG 287 (450)
T ss_dssp TTHHHHHHHHHHHHHHHHC-----CCSSCEEEEEESCGGGTSCSSSS
T ss_pred ecchhhHHHHHHHHHHHhc-----CCCceEEEEEEcccccCCcchhh
Confidence 5789999999999998865 35789999999999999887663
No 64
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=71.85 E-value=0.68 Score=50.21 Aligned_cols=45 Identities=24% Similarity=0.253 Sum_probs=32.0
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccchHHH
Q 007484 161 GAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGF 208 (602)
Q Consensus 161 GA~D~~sGva~~LE~ar~L~~~~~~p~~~I~flf~~aEE~gl~GS~~f 208 (602)
++-||..||+++||+++.+.+ .+++++++++++-||.|..|+++-
T Consensus 252 ~~lDdr~~~~~~l~al~~~~~---~~~~~~~~~~~d~EEVGs~ga~ga 296 (458)
T 1y7e_A 252 YGQDDKICVFTSLESIFDLEE---TPNKTAICFLVDKEEIGSTGSTGL 296 (458)
T ss_dssp SSHHHHHHHHHHHHHHSSSSC---CCSSCEECCCBCSTTC--------
T ss_pred ecCccHHHHHHHHHHHHhhhc---cCCceEEEEEEcccccCcccchhh
Confidence 577999999999999876542 477899999999999999888754
No 65
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=58.10 E-value=4.7 Score=43.15 Aligned_cols=74 Identities=18% Similarity=0.177 Sum_probs=41.8
Q ss_pred CCChhHHHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEEeCCCCCCCCCEEEEee
Q 007484 72 EGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNG 151 (602)
Q Consensus 72 ~gS~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~vll~a 151 (602)
..|+..-.+++++.++|++.|.+.-++ .+-.+-.+.+.|.. .+...|+++...|++-...++.++++|
T Consensus 13 ~~~~t~~h~v~~~~~~l~~~Gf~~l~e--~~~w~l~~g~k~~~----------~~~~g~lia~~~G~~~~~~~~~~ii~A 80 (428)
T 2ijz_A 13 KASPTPFHATASLARRLEAAGYRRLDE--RDAWHTETGGRYYV----------TRNDSSLIAIRLGRRSPLESGFRLVGA 80 (428)
T ss_dssp TTTHHHHHHHCCSHHHHHHHHHHHSCC----------CCCCEE----------CTTTTCCEEEECC--CCSTTCCEEEEC
T ss_pred HcCCCHHHHHHHHHHHHHHcCCeEccc--ccccccCCCCEEEE----------ECCCCEEEEEEECCcCCCCCCcEEEEE
Confidence 356666689999999999988643211 11111112222221 122369999988864111246799999
Q ss_pred ecCCCC
Q 007484 152 HFDGPL 157 (602)
Q Consensus 152 H~Dsv~ 157 (602)
|.|+..
T Consensus 81 H~Dspg 86 (428)
T 2ijz_A 81 HTDSPC 86 (428)
T ss_dssp BCCCSE
T ss_pred cCCcCC
Confidence 999964
No 66
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=49.52 E-value=4.7 Score=43.96 Aligned_cols=46 Identities=15% Similarity=-0.041 Sum_probs=34.2
Q ss_pred CCCCChhHHHHHHHHHHHHHhcC----CCCCCCEEEEEeCcccCCccchHH
Q 007484 161 GAGDCGSCVASMLELARLTIDSG----WIPPRPIIFLFNGAEELFMLGAHG 207 (602)
Q Consensus 161 GA~D~~sGva~~LE~ar~L~~~~----~~p~~~I~flf~~aEE~gl~GS~~ 207 (602)
++-||-.||.+++|+++.+.+.. ..+. ..++++++-||.|+.|++.
T Consensus 282 ~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~-~~v~v~~dqEEVGs~ga~g 331 (496)
T 3vat_A 282 PRLDNLHSCFCALQALIDSCSAPASLAADPH-VRMIALYDNEEVGSESAQG 331 (496)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTSHHHHHHCCS-EEEEEEESCGGGTSCSSSS
T ss_pred eccccHHHHHHHHHHHHhhhccccccccCCC-cEEEEEEccCCcCCCcchh
Confidence 67899999999999998775310 0123 3449999999999877664
No 67
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=44.89 E-value=25 Score=37.81 Aligned_cols=64 Identities=19% Similarity=0.089 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEEeCCCCCCCCCEEEEeeecCCCC
Q 007484 78 REAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPL 157 (602)
Q Consensus 78 e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~vll~aH~Dsv~ 157 (602)
-.+++++.++|++-|.+.-++. +.-...|.|.. .+...|+++...|+.+ .++.++++||.|++.
T Consensus 34 ~h~v~~~~~~l~~~Gf~~l~e~----~~l~~g~k~~~----------~r~~~~lia~~~g~~~--~~g~~ii~AH~Dsp~ 97 (450)
T 2glf_A 34 RMTVKEIKRILDESGFVPLEDF----AGDPMNMTVYA----------VNRGKAIAAFRVVDDL--KRGLNLVVAHIDSPR 97 (450)
T ss_dssp HHHHHHHHHHHHTTTCEETTSC----CSCTTSBCEEE----------ESSSSCEEEEEBCSCG--GGCCEEEEEECCCCE
T ss_pred HHHHHHHHHHHHHCcCEEcccc----cCCCCCCEEEE----------EcCCCEEEEEEeCCCC--CCCeEEEEEecccCC
Confidence 4789999999999885321110 11111122211 1223699998877521 236799999999963
No 68
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=41.76 E-value=52 Score=26.30 Aligned_cols=58 Identities=19% Similarity=0.214 Sum_probs=43.8
Q ss_pred CCCCCchHHHhhcCCCCcEEEEEeecCC-CcCCCcccccCCCCHHHHHHHHHHHHHHHHHHhCC
Q 007484 268 IPGDTDYRIFSQDYGDIPGLDIIFLIGG-YYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNS 330 (602)
Q Consensus 268 ips~tD~~~F~~~~~GIPgld~a~~~~~-~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~a 330 (602)
.++.||-+.|.+ .|+|.+.+...... ..-|+. =|+++-+.+.+..+...++++.+.+.
T Consensus 23 ~~g~TDar~~~~--~gip~v~fGPg~~~~~~~H~~---dE~v~i~~l~~~~~iy~~~i~~~~~~ 81 (88)
T 1q7l_B 23 MPAAGDNRYIRA--VGVPALGFSPMNRTPVLLHDH---DERLHEAVFLRGVDIYTRLLPALASV 81 (88)
T ss_dssp CCSCSHHHHHHH--TTCCEEEECCCCSCCCCTTST---TCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred eceeCcHHHHHH--cCCCEEEECCCCCCcccccCC---CCeeEHHHHHHHHHHHHHHHHHHHcC
Confidence 467999999975 59998876543321 245665 35677899999999999999999775
No 69
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=37.75 E-value=26 Score=22.58 Aligned_cols=18 Identities=6% Similarity=0.158 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 007484 580 ICPAVFVASDCACLGALI 597 (602)
Q Consensus 580 ~ia~~~~~~~~~~~g~~~ 597 (602)
+||.++++.|.+.+||-.
T Consensus 8 viaglvalltflafgfwl 25 (32)
T 2lx0_A 8 VIAGLVALLTFLAFGFWL 25 (32)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 578889999999999853
No 70
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=32.74 E-value=30 Score=37.64 Aligned_cols=65 Identities=17% Similarity=0.200 Sum_probs=37.2
Q ss_pred hhHHHHHHHHHHHHhcccccCCCceeEEEEee-----eecCccccccccccccccccccceEEEEEeCCCCCCCCCEEEE
Q 007484 75 PGLREAAVYIKTQLEGIKERAGPKFRIEIEEN-----VVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLM 149 (602)
Q Consensus 75 ~~~e~a~~yL~~~l~~ig~~~~~~~~vevd~~-----~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~vll 149 (602)
+..-.+++++.++|++-|.+. +++. .+.|.|.. -++...+++-.-|.+....+..-++
T Consensus 50 pT~~hav~~~~~~L~~aGF~~-------L~e~~~w~l~~ggkyyv----------~rn~ssliAf~vg~~~~~~~G~~iv 112 (496)
T 3vat_A 50 PSPFHAVAECRSRLLQAGFHE-------LKETESWDIKPESKYFL----------TRNSSTIIAFAVGGQYVPGNGFSLI 112 (496)
T ss_dssp SSHHHHHHHHHHHHHHTTCEE-------CCTTSCCCCCTTCEEEE----------EETTTEEEEEEECTTCCTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHHCcCeE-------ccccCCcccCCCCEEEE----------ECCCcEEEEEEeCCCCCCCCCeEEE
Confidence 344578999999999988432 2111 11121111 1344466765434322234568899
Q ss_pred eeecCCC
Q 007484 150 NGHFDGP 156 (602)
Q Consensus 150 ~aH~Dsv 156 (602)
+||.||.
T Consensus 113 gaHtDSP 119 (496)
T 3vat_A 113 GAHTDSP 119 (496)
T ss_dssp EEECCCC
T ss_pred EEeccCC
Confidence 9999994
No 71
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=25.58 E-value=41 Score=36.24 Aligned_cols=66 Identities=17% Similarity=0.210 Sum_probs=36.3
Q ss_pred HHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccc-cccce-EEEEEeCCCCCCCCCEEEEeeecCCC
Q 007484 79 EAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGY-RNHTN-IVMRISSTDSQDTDPSVLMNGHFDGP 156 (602)
Q Consensus 79 ~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y-~~~~N-Vi~~i~g~~~~~~~~~vll~aH~Dsv 156 (602)
.+++++.++|++-|.+ ++++... ..|.. ++....| .+..| +++...|+++. .+..++++||.|+.
T Consensus 39 hav~~~~~~l~~sGfe-------~l~e~~~-~~w~l----~~g~~~~~~~~g~slia~~~G~~~~-~~g~~ii~AH~Dsp 105 (461)
T 2glj_A 39 ECVTELIKTAEKSGYR-------NIEDILA-KGETL----KEGDKVYANNRGKGLIMFLIGKEPL-YTGFKILGAHIDSP 105 (461)
T ss_dssp STHHHHHHHSCCSSCC-------CTTCCCS-TTTTC----CTTCCCEEEETTTEEEECCCCSSCG-GGCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCh-------hHHHHhh-Hhhcc----CCCCEEEEEcCCCEEEEEEeCCcCc-cCCceEEEEecCcC
Confidence 6689999999999854 2222100 01111 0000111 12234 99988776421 13459999999996
Q ss_pred C
Q 007484 157 L 157 (602)
Q Consensus 157 ~ 157 (602)
.
T Consensus 106 g 106 (461)
T 2glj_A 106 R 106 (461)
T ss_dssp B
T ss_pred C
Confidence 4
No 72
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=23.87 E-value=42 Score=36.07 Aligned_cols=64 Identities=13% Similarity=0.089 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEEe-CCCCCCCCCEEEEeeecCCC
Q 007484 78 REAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRIS-STDSQDTDPSVLMNGHFDGP 156 (602)
Q Consensus 78 e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~-g~~~~~~~~~vll~aH~Dsv 156 (602)
-.+++++.++|++.|.+.-++. +.-...+.|.. .+..|.++.+. |+++. .+..-+++||.|+.
T Consensus 36 ~hav~~~~~~l~~~Gf~~l~e~----~~l~~g~~~~~-----------~r~g~~i~a~~~G~~~~-~~g~~ii~AH~Dsp 99 (458)
T 1y7e_A 36 REVTAYALDKAKKLGFINAEEK----KNLMPGDKIFY-----------TCREKSVAFAIIGKNPI-EDGMNFIVSHTDSP 99 (458)
T ss_dssp HHHHHHHHHHHHTTTCEESTTC----CCCCTTCEEEC-----------BCSSSCBCCEECCSSCG-GGCCEECCCBCCCC
T ss_pred HHHHHHHHHHHHHcCCcccccc----cccCCCCeEEE-----------ECCCCEEEEEEeCCCCC-CCCcEEEEEccCcC
Confidence 4889999999999995321100 00011111111 22246666554 65321 12235999999995
Q ss_pred C
Q 007484 157 L 157 (602)
Q Consensus 157 ~ 157 (602)
.
T Consensus 100 g 100 (458)
T 1y7e_A 100 R 100 (458)
T ss_dssp B
T ss_pred C
Confidence 4
No 73
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=21.50 E-value=83 Score=34.79 Aligned_cols=68 Identities=16% Similarity=0.031 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhcccccCCCceeEEEEeeeecCccccccccccccccccccceEEEEEeCCCCCCCCC-EEEEeeecCCC
Q 007484 78 REAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDP-SVLMNGHFDGP 156 (602)
Q Consensus 78 e~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~G~~~~~~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~-~vll~aH~Dsv 156 (602)
-.+++++.++|++-|.+.-.+- +-+.-...|.|.. -++..+|++-.-|++....+. .-+++||.||.
T Consensus 24 ~HaV~~~~~~L~~aGF~~L~E~--~~W~l~~Ggkyy~----------~rn~ssiiAf~vG~~~~~~~G~~~IvgAHtDSP 91 (571)
T 4eme_A 24 FLACKNLKERLENNGFINLSEG--ETWNLNKNEGYVL----------CKENRNICGFFVGKNFNIDTGSILISIGHIDSC 91 (571)
T ss_dssp HHHHHHHHHHHHHTTCEECCTT--SCCCCCTTCEEEE----------EETTTEEEEEEECTTCCTTTCCEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHCcCEEcccc--CCcccCCCCEEEE----------EcCCCEEEEEEeCCcCCCCCCcEEEEEEeccCC
Confidence 4789999999999884321100 0001111222211 144567887766654212345 78999999994
Q ss_pred C
Q 007484 157 L 157 (602)
Q Consensus 157 ~ 157 (602)
.
T Consensus 92 ~ 92 (571)
T 4eme_A 92 A 92 (571)
T ss_dssp E
T ss_pred c
Confidence 3
Done!