Query 007488
Match_columns 601
No_of_seqs 160 out of 1480
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 02:58:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007488.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007488hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 9E-123 3E-127 1028.8 52.4 526 62-592 1-527 (547)
2 1we3_A CPN60(groel); chaperoni 100.0 3E-122 9E-127 1025.9 56.0 531 62-596 1-533 (543)
3 3rtk_A 60 kDa chaperonin 2; he 100.0 1E-123 4E-128 1034.0 43.7 526 62-594 1-527 (546)
4 1iok_A Chaperonin 60; chaperon 100.0 9E-123 3E-127 1029.3 43.9 528 62-593 2-530 (545)
5 3p9d_C T-complex protein 1 sub 100.0 4E-103 1E-107 877.5 38.7 493 63-591 11-589 (590)
6 3ko1_A Chaperonin; 9-fold symm 100.0 2E-100 8E-105 852.1 49.0 468 63-596 22-541 (553)
7 3p9d_A T-complex protein 1 sub 100.0 3E-101 1E-105 860.8 41.9 472 63-595 16-555 (559)
8 3ruv_A Chaperonin, CPN; double 100.0 2E-100 8E-105 851.6 47.6 465 63-593 11-524 (543)
9 3iyg_B T-complex protein 1 sub 100.0 1.7E-99 6E-104 840.2 52.4 460 64-590 3-513 (513)
10 1a6d_B Thermosome (beta subuni 100.0 1.2E-99 4E-104 846.5 49.1 469 63-597 13-532 (543)
11 1q3q_A Thermosome alpha subuni 100.0 9E-100 3E-104 847.9 47.0 464 63-592 15-529 (548)
12 1a6d_A Thermosome (alpha subun 100.0 1.8E-99 6E-104 844.9 45.6 463 63-592 14-526 (545)
13 3iyg_H T-complex protein 1 sub 100.0 1.2E-98 4E-103 833.2 51.6 456 72-588 10-514 (515)
14 3p9d_D T-complex protein 1 sub 100.0 6E-100 2E-104 846.1 38.9 464 63-588 11-528 (528)
15 3iyg_A T-complex protein 1 sub 100.0 3.2E-98 1E-102 832.7 50.1 464 65-589 4-529 (529)
16 3p9d_B T-complex protein 1 sub 100.0 4E-100 2E-104 847.8 32.2 467 63-596 9-526 (527)
17 3p9d_G T-complex protein 1 sub 100.0 2.4E-99 8E-104 844.2 36.3 468 63-594 16-533 (550)
18 3iyg_E T-complex protein 1 sub 100.0 2.5E-97 8E-102 823.6 52.0 458 64-587 3-514 (515)
19 3iyg_D T-complex protein 1 sub 100.0 2.3E-97 8E-102 824.0 49.4 458 65-588 5-518 (518)
20 3p9d_E T-complex protein 1 sub 100.0 1.5E-97 5E-102 831.7 43.6 468 63-590 37-560 (562)
21 3iyg_G T-complex protein 1 sub 100.0 3E-96 1E-100 814.5 50.7 453 72-588 8-514 (515)
22 3iyg_Q T-complex protein 1 sub 100.0 2.5E-96 8E-101 815.1 49.7 451 72-587 10-511 (512)
23 3iyg_Z T-complex protein 1 sub 100.0 3.1E-95 1.1E-99 806.2 48.7 455 66-587 5-516 (517)
24 3p9d_H T-complex protein 1 sub 100.0 1.6E-96 5E-101 824.3 31.8 461 72-596 25-556 (568)
25 3p9d_F T-complex protein 1 sub 100.0 2.8E-95 1E-99 811.9 33.1 464 64-593 10-542 (546)
26 3aq1_B Thermosome subunit; gro 100.0 4.1E-90 1.4E-94 762.8 42.3 430 101-594 1-482 (500)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 1.8E-48 6.1E-53 368.7 16.8 193 248-440 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 4.7E-47 1.6E-51 359.7 17.8 189 251-439 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 3.4E-36 1.2E-40 272.5 15.2 144 253-396 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.8 4.7E-21 1.6E-25 183.8 13.8 146 244-448 1-174 (178)
31 1ass_A Thermosome; chaperonin, 99.7 1.6E-17 5.6E-22 156.2 14.0 126 251-399 1-153 (159)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=8.9e-123 Score=1028.79 Aligned_cols=526 Identities=54% Similarity=0.834 Sum_probs=512.2
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHh
Q 007488 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (601)
Q Consensus 62 ~~k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~ 141 (601)
++|+|.|| .++|+.+++||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+||+||+||+++|+
T Consensus 1 ~~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~ 78 (547)
T 1kp8_A 1 AAKDVKFG--NDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVAS 78 (547)
T ss_dssp CCEEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred CCcccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHH
Confidence 37999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccCcH-HHHHHHHhhcCChhHHH
Q 007488 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (601)
Q Consensus 142 ~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls 220 (601)
+||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|+++. +|.++|++|++++++|+
T Consensus 79 ~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~ 158 (547)
T 1kp8_A 79 KANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVG 158 (547)
T ss_dssp HHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHH
T ss_pred hhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999877 99999999999999999
Q ss_pred HHHHHHHHhhccCCceEEecCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEeeecccCCCHHHHHHHHHH
Q 007488 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (601)
Q Consensus 221 ~li~eAi~~vg~~g~I~i~~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~ 300 (601)
+|+++|+.+++++|+|++++|++++|++++++||+|+++|.||||++++++|+++++||+|+++|++|+++++|++++++
T Consensus 159 ~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~ 238 (547)
T 1kp8_A 159 KLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEA 238 (547)
T ss_dssp HHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHH
T ss_pred HHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEeecCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCcee
Q 007488 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (601)
Q Consensus 301 ~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~ 380 (601)
+.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||+++++++|++++++++++||+
T Consensus 239 i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~ 318 (547)
T 1kp8_A 239 VAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQ 318 (547)
T ss_dssp HHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEE
T ss_pred HHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCeEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHH
Q 007488 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (601)
Q Consensus 381 ~~~v~i~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DA 460 (601)
|++|+++++++++|++|++++.+++|++||+.+++.++++|++|+|+||+++|++++|||+|||+|+.+++|+||+++||
T Consensus 319 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DA 398 (547)
T 1kp8_A 319 AKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDA 398 (547)
T ss_dssp EEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred eeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCccccccHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCee
Q 007488 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKY 540 (601)
Q Consensus 461 l~a~k~a~~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~~~~~ 540 (601)
+|++|+++++|+|||||++|++++.+|++++. .++.+ ++++++|++||+.||++||+|||+|+.+++.+|+.. +.++
T Consensus 399 l~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~~-q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~-~~~~ 475 (547)
T 1kp8_A 399 LHATRAAVEEGVVAGGGVALIRVASKLADLRG-QNADQ-NVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG-DGNY 475 (547)
T ss_dssp HHHHHHHHHHCEEETTTHHHHHHHHHTTTCCC-SSHHH-HHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-CTTE
T ss_pred HHHHHHhccCCEEeCCcHHHHHHHHHHHHHhc-cCchH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-CCCE
Confidence 99999999999999999999999999999876 55555 589999999999999999999999999999999875 5789
Q ss_pred eEecCCCcccchhhcccccchHHHHHHHHHHHHHHHHHHchhHHHhCCCCCC
Q 007488 541 GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE 592 (601)
Q Consensus 541 Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~~A~e~a~~lL~iD~iI~~~~~~~ 592 (601)
|||+.+|+|.||++.|||||+.||+++|++|+++|++||++|++|..+|+++
T Consensus 476 G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~ 527 (547)
T 1kp8_A 476 GYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKND 527 (547)
T ss_dssp EEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCC--
T ss_pred eEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecCCccC
Confidence 9999999999999999999999999999999999999999999999988865
No 2
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=2.7e-122 Score=1025.94 Aligned_cols=531 Identities=55% Similarity=0.848 Sum_probs=513.1
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHh
Q 007488 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (601)
Q Consensus 62 ~~k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~ 141 (601)
|+|+|.|| .++|+.+++||..|+++|++||||+||||||++++|+|+|||||+||||+|+++||+||+||+||+++|+
T Consensus 1 ~~k~~~~g--~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~ 78 (543)
T 1we3_A 1 MAKILVFD--EAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVAS 78 (543)
T ss_dssp -CEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred CCcccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHH
Confidence 38999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccCcH-HHHHHHHhhcCChhHHH
Q 007488 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (601)
Q Consensus 142 ~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls 220 (601)
+||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|+++. +|.+||++|++ +++|+
T Consensus 79 ~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~ 157 (543)
T 1we3_A 79 KTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVG 157 (543)
T ss_dssp HHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHH
T ss_pred hhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999877 99999999998 89999
Q ss_pred HHHHHHHHhhccCCceEEecCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEeeecccCCCHHHHHHHHHH
Q 007488 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (601)
Q Consensus 221 ~li~eAi~~vg~~g~I~i~~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~ 300 (601)
+|++||+.+++++|+|++++|++++|++++++||+|+++|.||||++++++|+++++||+|+++|++|++++++++++++
T Consensus 158 ~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~ 237 (543)
T 1we3_A 158 KLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQ 237 (543)
T ss_dssp HHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEeecCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCcee
Q 007488 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (601)
Q Consensus 301 ~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~ 380 (601)
+.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||+++++++|++++++++++||+
T Consensus 238 i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~ 317 (543)
T 1we3_A 238 VAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGR 317 (543)
T ss_dssp HHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEE
T ss_pred HHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCeEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHH
Q 007488 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (601)
Q Consensus 381 ~~~v~i~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DA 460 (601)
|++|+++++++++|++|++++.+++|++||+.+++.++++|++|+|+||+++|++++|||+|||+|+.+++|+||+++||
T Consensus 318 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DA 397 (543)
T 1we3_A 318 AERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDA 397 (543)
T ss_dssp EEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCccccccHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC-CCe
Q 007488 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD-NHK 539 (601)
Q Consensus 461 l~a~k~a~~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~-~~~ 539 (601)
+|++|+++++|+|||||++|++++.+|++++.+.++.+| +++++|++||+.||++||+|||+|+.+++.+|+..| +++
T Consensus 398 l~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~ 476 (543)
T 1we3_A 398 LNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEA-TGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPR 476 (543)
T ss_dssp HHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHH-HHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTT
T ss_pred HHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999877667665 899999999999999999999999999999999753 468
Q ss_pred eeEecCCCcccchhhcccccchHHHHHHHHHHHHHHHHHHchhHHHhCCCCCCCCCC
Q 007488 540 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 596 (601)
Q Consensus 540 ~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~~A~e~a~~lL~iD~iI~~~~~~~~~~~ 596 (601)
+|||+.+|+|.||++.|||||+.||+++|++|+++|++||++|++|..+|+++++.|
T Consensus 477 ~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~ 533 (543)
T 1we3_A 477 YGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKKESTP 533 (543)
T ss_dssp EEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECSCC-----
T ss_pred EEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCCCCC
Confidence 999999999999999999999999999999999999999999999999888665444
No 3
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1e-123 Score=1034.00 Aligned_cols=526 Identities=55% Similarity=0.825 Sum_probs=433.7
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHh
Q 007488 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (601)
Q Consensus 62 ~~k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~ 141 (601)
|+|+|.|| +++|+.|+.||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||++|+||+|++++|+
T Consensus 1 ~~k~~~~~--~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~ 78 (546)
T 3rtk_A 1 MAKTIAYD--EEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAK 78 (546)
T ss_dssp --------------------------------------------------------------CCCHHHHHHHHHHHHHHT
T ss_pred CCceeecc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHH
Confidence 58999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccCcH-HHHHHHHhhcCChhHHH
Q 007488 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (601)
Q Consensus 142 ~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls 220 (601)
+||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|+++. +|.++|++|++ +++++
T Consensus 79 ~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~ 157 (546)
T 3rtk_A 79 KTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIG 157 (546)
T ss_dssp SCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHH
T ss_pred hhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987 99999999998 88999
Q ss_pred HHHHHHHHhhccCCceEEecCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEeeecccCCCHHHHHHHHHH
Q 007488 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (601)
Q Consensus 221 ~li~eAi~~vg~~g~I~i~~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~ 300 (601)
+|+++|+.+++++|+|+++.+.+..+.+++++||+|+++|.||||++++++|+++++||+|+++|++|++++++++++++
T Consensus 158 ~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~ 237 (546)
T 3rtk_A 158 DLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEK 237 (546)
T ss_dssp HHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHH
T ss_pred HHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHH
Confidence 99999999999999999988877655559999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEeecCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCcee
Q 007488 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (601)
Q Consensus 301 ~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~ 380 (601)
+.+.|+||||++++|+++++++|+.|+++|+++|++||+|+||+.++.+|+|||++|||+++++++|++++++++++||+
T Consensus 238 I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~ 317 (546)
T 3rtk_A 238 VIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGK 317 (546)
T ss_dssp HHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEE
T ss_pred HHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCeEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHH
Q 007488 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (601)
Q Consensus 381 ~~~v~i~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DA 460 (601)
|++|+++++++++|++|++++.++.|++||++++++++++|++|+|+||+++|+|++|||+|||+|+.+++|+||+++||
T Consensus 318 a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DA 397 (546)
T 3rtk_A 318 ARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDA 397 (546)
T ss_dssp EEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHH
T ss_pred eEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCccccccHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCee
Q 007488 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKY 540 (601)
Q Consensus 461 l~a~k~a~~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~~~~~ 540 (601)
+|++|+++++|+|||||++|++++.+|++++ +++.+| +++++|++||+.||++||+|||+|+.+++.+|+.. ...+
T Consensus 398 l~a~r~av~~giVpGGGa~e~~~s~~L~~~~--~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~-~~~~ 473 (546)
T 3rtk_A 398 VRNAKAAVEEGIVAGGGVTLLQAAPTLDELK--LEGDEA-TGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL-PAGH 473 (546)
T ss_dssp HHHHHHHHHHCEEETTTHHHHTTGGGSTTSC--CCTTHH-HHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS-CTTE
T ss_pred HHHHHHHHhCCcccCCcHHHHHHHHHHHHhc--cccHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh-cCCE
Confidence 9999999999999999999999999999987 556655 89999999999999999999999999999999875 4569
Q ss_pred eEecCCCcccchhhcccccchHHHHHHHHHHHHHHHHHHchhHHHhCCCCCCCC
Q 007488 541 GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 594 (601)
Q Consensus 541 Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~~A~e~a~~lL~iD~iI~~~~~~~~~ 594 (601)
|||+.+|+|.||++.|||||+.||+++|++|+|+|++||++|++|..+|+++|+
T Consensus 474 G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~~ 527 (546)
T 3rtk_A 474 GLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKEKA 527 (546)
T ss_dssp ECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC------------
T ss_pred eEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999999999999999999999999999999887654
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=9e-123 Score=1029.28 Aligned_cols=528 Identities=52% Similarity=0.830 Sum_probs=470.5
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHh
Q 007488 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (601)
Q Consensus 62 ~~k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~ 141 (601)
|+|+|.|| .++|+.+++||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+||+||+||+++|+
T Consensus 2 ~~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~ 79 (545)
T 1iok_A 2 AAKEVKFN--SDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVAS 79 (545)
T ss_dssp CCEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred Cchhhhcc--HHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHH
Confidence 48999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccCcH-HHHHHHHhhcCChhHHH
Q 007488 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (601)
Q Consensus 142 ~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~L~~va~ts~~~~~~ls 220 (601)
+||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|+++. +|.++|++|++++++|+
T Consensus 80 ~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~ 159 (545)
T 1iok_A 80 RTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIG 159 (545)
T ss_dssp HGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHH
T ss_pred hhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999876 89999999999999999
Q ss_pred HHHHHHHHhhccCCceEEecCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEeeecccCCCHHHHHHHHHH
Q 007488 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (601)
Q Consensus 221 ~li~eAi~~vg~~g~I~i~~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~ 300 (601)
+|+++|+.+++++|+|++++|++++|++++++||+|+++|.||||++++++|+++++||+|+++|++|++++++++++++
T Consensus 160 ~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~ 239 (545)
T 1iok_A 160 QQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLES 239 (545)
T ss_dssp HHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-------
T ss_pred HHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEeecCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCcee
Q 007488 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (601)
Q Consensus 301 ~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~ 380 (601)
+.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||+++++++|++++++++++||+
T Consensus 240 i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~ 319 (545)
T 1iok_A 240 VIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGR 319 (545)
T ss_dssp ----CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEE
T ss_pred HHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCeEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHH
Q 007488 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (601)
Q Consensus 381 ~~~v~i~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DA 460 (601)
|++|++++++|++|++|++++.+++|++||+.+++.++++|++|+|+||+++|++++|||+|||+|+.+++|+||+++||
T Consensus 320 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DA 399 (545)
T 1iok_A 320 AKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDA 399 (545)
T ss_dssp EEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCccccccHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCee
Q 007488 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKY 540 (601)
Q Consensus 461 l~a~k~a~~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~~~~~ 540 (601)
+|++|+++++|+|||||++|++++.+|++++. .++.+ ++++++|++||+.||++||+|||+|+.+++.+|+..|++++
T Consensus 400 l~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~~ 477 (545)
T 1iok_A 400 LNATRAAVQEGIVVGGGVALVQGAKVLEGLSG-ANSDQ-DAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAF 477 (545)
T ss_dssp HHHHHHHHHHCEEETTTHHHHHHGGGGGSCCC-SSHHH-HHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCCSTTE
T ss_pred HHHHHHHhhcCCCCCchHHHHHHHHHHHHHhc-cCchH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCe
Confidence 99999999999999999999999999999876 55555 48999999999999999999999999999999998777889
Q ss_pred eEecCCCcccchhhcccccchHHHHHHHHHHHHHHHHHHchhHHHhCCCCCCC
Q 007488 541 GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEP 593 (601)
Q Consensus 541 Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~~A~e~a~~lL~iD~iI~~~~~~~~ 593 (601)
|||+.+|+|.||++.|||||+.||+++|++|+++|++||++|++|..+|++++
T Consensus 478 G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~~ 530 (545)
T 1iok_A 478 GFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKPEPKA 530 (545)
T ss_dssp EEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC----
T ss_pred eEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccCCccCC
Confidence 99999999999999999999999999999999999999999999999887653
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=3.7e-103 Score=877.47 Aligned_cols=493 Identities=19% Similarity=0.286 Sum_probs=424.4
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhh
Q 007488 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (601)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~ 142 (601)
..+-.+| .++|..|+.||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |+||+++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~----Akll~e~a~~ 84 (590)
T 3p9d_C 11 SQERTTG--RQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPA----AKSMLELSRT 84 (590)
T ss_dssp TCCBCTT--HHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHH----HHTHHHHTTT
T ss_pred CcchhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHH----HHHHHHHHHh
Confidence 3466788 899999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHH-HHCCCChHHHHHHHHHHHHHHHHHHHhcccccCc--H-HHHHHHHhhcC----
Q 007488 143 TNDLAGDGTTTSVVLAQGLIAEGVKV-VAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAG---- 214 (601)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~l-i~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~L~~va~ts~~---- 214 (601)
||+++||||||+||||++||+++.++ +.+|+||+.|++||++|++.++++|+++++|++. . +|.++|+||++
T Consensus 85 qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~ 164 (590)
T 3p9d_C 85 QDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYV 164 (590)
T ss_dssp HHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTT
T ss_pred hhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999 9999999999999999999999999999999875 3 89999998753
Q ss_pred --ChhHHHHHHHHHHHhhccCCc----------------eEE--ecCCcccceeeeeeeeEEeecccCCccccCcccCee
Q 007488 215 --NNYEVGNMIAEAMSKVGRKGV----------------VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAV 274 (601)
Q Consensus 215 --~~~~ls~li~eAi~~vg~~g~----------------I~i--~~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~ 274 (601)
++++|++|+++|+.++++++. |++ .+|++++|+ ++++||+|++++.+| +|++
T Consensus 165 ~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds-~lv~Gmvfdk~~~~~-------~m~~ 236 (590)
T 3p9d_C 165 IHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS-RVLKGVLLNKDVVHP-------KMSR 236 (590)
T ss_dssp GGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC-BCCSSEEECCCCSCT-------TSCS
T ss_pred cccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc-eeeeEEEEecccCCC-------CCcc
Confidence 478999999999999987653 223 479999998 999999999998776 3778
Q ss_pred EeeceeEeeeccc-------------CCCHHHHHHHH-----------HHHHhcCCCEEEEcccccHHHHHHHHHhhhcc
Q 007488 275 EYENCKLLLVDKK-------------ITNARDLINVL-----------EDAIRGAYPILIIAEDIEQEALATLVVNKLRG 330 (601)
Q Consensus 275 ~~~~~kIll~d~~-------------i~~~~~l~~~l-----------e~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g 330 (601)
+++||+|+++|++ |++++++.+++ +++.+.|++|||++++|+++|+++|..+++
T Consensus 237 ~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I-- 314 (590)
T 3p9d_C 237 HIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGC-- 314 (590)
T ss_dssp CEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTC--
T ss_pred eeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccc--
Confidence 8999999999985 45666665544 688899999999999999999999998742
Q ss_pred cceEEEeecCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCcee-eeEEE---EecCeEEEEcCCCChhh----
Q 007488 331 ALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVV---LTKDTTTIVGDGSTQDA---- 402 (601)
Q Consensus 331 ~~~i~aVk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~-~~~v~---i~~~~~~~i~~~~~~~~---- 402 (601)
+ .|+++++.+|+|||++|||++++ +++++++++||+ |++|+ +++++|++|++|++++.
T Consensus 315 ----~-----av~~~~k~~le~ia~~TGa~iis-----~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~ 380 (590)
T 3p9d_C 315 ----S-----VLRRVKKSDNNRIARVTGATIVN-----RVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGW 380 (590)
T ss_dssp ----C-----CCCCCCHHHHHHHHHHHTCCCCS-----CSTTCCTTSCBCCCSEEECCEETTEECEEECC----------
T ss_pred ----e-----eeccCCHHHHHHHHHHhCCceee-----cccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccc
Confidence 3 57799999999999999999998 689999999999 99996 57899999999998888
Q ss_pred ----------------------HHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHH
Q 007488 403 ----------------------VSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (601)
Q Consensus 403 ----------------------i~~r~~~l~~~l~~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DA 460 (601)
++.|++||+.+++.++++|+++ +++|+|++|||+|||+|+.+++|+||+++||
T Consensus 381 ~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l~ggv~tI~lrg~te~~l~E~kr~i~DA 455 (590)
T 3p9d_C 381 SHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHGSGKACTIMLRGGSKDILNEIDRNLQDA 455 (590)
T ss_dssp ----------------------------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHH
T ss_pred cccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhhcCCeeEEEEcCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999966 4799999999999999999999999999999
Q ss_pred HHHHHHHHhcC-ccccccHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc---C
Q 007488 461 LNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---D 536 (601)
Q Consensus 461 l~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~---~ 536 (601)
+|++|+++++| +|||||++|++++.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|+.. +
T Consensus 456 l~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~ 534 (590)
T 3p9d_C 456 MAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQ-WPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQG 534 (590)
T ss_dssp HHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTH-HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC
Confidence 99999999995 9999999999999999999888877776 79999999999999999999999999999999875 3
Q ss_pred CCeeeEecCCCcccchhhcccccchHHHHHHHHHHHHHHHHHHchhHHHhCCCCC
Q 007488 537 NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEP 591 (601)
Q Consensus 537 ~~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~~A~e~a~~lL~iD~iI~~~~~~ 591 (601)
++++|||+.+|+|.||++.|||||+.||+++|++|+|+|++|||||++|...|+.
T Consensus 535 ~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~ 589 (590)
T 3p9d_C 535 NFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRKQ 589 (590)
T ss_dssp CTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCCC--
T ss_pred CCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 5789999999999999999999999999999999999999999999999887654
No 6
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=2.4e-100 Score=852.12 Aligned_cols=468 Identities=22% Similarity=0.367 Sum_probs=423.7
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhh
Q 007488 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (601)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~ 142 (601)
..+..|| .++|..|+.||+.|+++|++||||+||||||+++.|+|+|||||+||||+|+++||. |+||+++|++
T Consensus 22 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 95 (553)
T 3ko1_A 22 GSSRTYG--KEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPA----AKLLVQIAKG 95 (553)
T ss_dssp ------C--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHH----HHHHHHHHHT
T ss_pred Ccccchh--HHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChh----HHHHHHHhhC
Confidence 3567788 889999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccC--cH-HHHHHHHhhcCC----
Q 007488 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN---- 215 (601)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~~---- 215 (601)
||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||+++
T Consensus 96 qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~ 175 (553)
T 3ko1_A 96 QDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVA 175 (553)
T ss_dssp CSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCC
T ss_pred CcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999987 45 899999999875
Q ss_pred --hhHHHHHHHHHHHhhccC--Cc-------eEEe--cCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEe
Q 007488 216 --NYEVGNMIAEAMSKVGRK--GV-------VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (601)
Q Consensus 216 --~~~ls~li~eAi~~vg~~--g~-------I~i~--~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIl 282 (601)
+++|++|++||+.+++++ |+ |+++ +|++++|+ ++++||+|+++|.|||| +++++||||+
T Consensus 176 ~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 247 (553)
T 3ko1_A 176 GAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVVDKEVVHPGM-------PKRLENAKIA 247 (553)
T ss_dssp TTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEECSCBSCTTS-------CSCCBSCEEE
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEecccccCCCC-------ccccccceEE
Confidence 799999999999999986 66 7764 78899998 99999999999999985 4578999999
Q ss_pred eeccc-------------CCCHHH-----------HHHHHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEee
Q 007488 283 LVDKK-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (601)
Q Consensus 283 l~d~~-------------i~~~~~-----------l~~~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk 338 (601)
++|++ |+++++ +.++++++.+.|+||||++++|+++++++|..+ +|++|+
T Consensus 248 l~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~------gI~~v~ 321 (553)
T 3ko1_A 248 LIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKK------GVLAVR 321 (553)
T ss_dssp EECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHH------TCEEEC
T ss_pred EecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhc------chhhhh
Confidence 99984 678876 456789999999999999999999999999865 346666
Q ss_pred cCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEEEe---cCeEEEEcCCCChhhHHHHHHHHHHHHH
Q 007488 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (601)
Q Consensus 339 ~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~r~~~l~~~l~ 415 (601)
++++.+|+|||++|||++++ +++++++++||+|++|++. +++++||.+|+++
T Consensus 322 -----~v~k~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~--------------- 376 (553)
T 3ko1_A 322 -----RAKKSDLEKLARATGGRVVS-----NIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNP--------------- 376 (553)
T ss_dssp -----CCCHHHHHHHHTTTTCCEES-----CGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSS---------------
T ss_pred -----hhhhhhHHHHHHhhCCeeec-----ccccCChhhcchHHHHHHhhcCcceEEEeccCCCC---------------
Confidence 66799999999999999999 6899999999999999864 8899999999764
Q ss_pred hhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHhhcC
Q 007488 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (601)
Q Consensus 416 ~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~~~~ 494 (601)
..|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.++
T Consensus 377 --------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~ 436 (553)
T 3ko1_A 377 --------------------KSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQV 436 (553)
T ss_dssp --------------------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHH
T ss_pred --------------------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhcccc
Confidence 478999999999999999999999999999999999 99999999999999999998877
Q ss_pred ChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---C-CeeeEecCCCcccchhhcccccchHHHHHHHHH
Q 007488 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---N-HKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEH 570 (601)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~---~-~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~~ 570 (601)
++.+| +++++|++||+.||++||+|||+|+.+++.+|+..| + +++|||+.+|+|.||++.|||||+.||+++|++
T Consensus 437 ~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~ 515 (553)
T 3ko1_A 437 GGKEQ-LAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKA 515 (553)
T ss_dssp CSHHH-HHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETTHHHHHHHH
T ss_pred CChhH-hHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhhhhhhhhhh
Confidence 77776 799999999999999999999999999999998765 2 579999999999999999999999999999999
Q ss_pred HHHHHHHHHchhHHHhCCCCCCCCCC
Q 007488 571 ASSVAKTFLMSDCVVVEIKEPEPAMP 596 (601)
Q Consensus 571 A~e~a~~lL~iD~iI~~~~~~~~~~~ 596 (601)
|+|+|++|||+|++|...|++.|.+|
T Consensus 516 A~e~a~~iL~iD~ii~~~~~~~~~~~ 541 (553)
T 3ko1_A 516 ATEAATLVLRIDDVVSAGKKSGGESK 541 (553)
T ss_dssp HHHHHHHHHHEEEECCC---------
T ss_pred cchhheEEEehHHHHHhhhhccCCCC
Confidence 99999999999999999888765433
No 7
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=3.2e-101 Score=860.80 Aligned_cols=472 Identities=23% Similarity=0.329 Sum_probs=435.7
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhh
Q 007488 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (601)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~ 142 (601)
+|++.|| .++|..|+.||+.|+++|++||||+||||||+++.|+|+|||||+||||+|+++||+ |+||+++|++
T Consensus 16 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 89 (559)
T 3p9d_A 16 GGEKISG--DDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPA----GKILVELAQQ 89 (559)
T ss_dssp SCEEEET--HHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHH----HHHHHHHHHH
T ss_pred cccccch--HHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHH----HHHHHHHHHH
Confidence 7999999 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHh-cccccCc--H-HHHHHHHhhcCC---
Q 007488 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVED--S-ELADVAAVSAGN--- 215 (601)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~-~s~~v~~--~-~L~~va~ts~~~--- 215 (601)
||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|++ +++|++. . +|.++|+||+++
T Consensus 90 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~ 169 (559)
T 3p9d_A 90 QDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKII 169 (559)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGG
T ss_pred HHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999 9999985 3 899999999875
Q ss_pred ---hhHHHHHHHHHHHhhcc-----CCc-----eEE--ecCCcccceeeeeeeeEEeecccCCccccCcccCeeEee--c
Q 007488 216 ---NYEVGNMIAEAMSKVGR-----KGV-----VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYE--N 278 (601)
Q Consensus 216 ---~~~ls~li~eAi~~vg~-----~g~-----I~i--~~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~--~ 278 (601)
+++|++|+++|+.++++ +|. |++ .+|++++|| ++++||+|+++|.|||| +++++ |
T Consensus 170 ~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~m-------~~~ie~~n 241 (559)
T 3p9d_A 170 GADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGYALNCTVASQAM-------PKRIAGGN 241 (559)
T ss_dssp GTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTTS-------CSEECSSS
T ss_pred cchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccEEEeecccCCCc-------ceeeccCC
Confidence 79999999999999984 244 333 359999998 99999999999999985 45788 9
Q ss_pred eeEeeecccC-------------CCHHH-----------HHHHHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcccceE
Q 007488 279 CKLLLVDKKI-------------TNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKI 334 (601)
Q Consensus 279 ~kIll~d~~i-------------~~~~~-----------l~~~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i 334 (601)
|||++++++| +++++ +.++++++.+.|+||||++++|+++++++|+.|+ |
T Consensus 242 ~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~------I 315 (559)
T 3p9d_A 242 VKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAK------I 315 (559)
T ss_dssp BCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTT------C
T ss_pred ceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcC------C
Confidence 9999999986 45544 5778999999999999999999999999999984 4
Q ss_pred EEeecCCcCCcchhHHHHHHHHhCCeEeeccCCccc-cCCCCCCceeeeEEE---EecCeEEEEcCCCChhhHHHHHHHH
Q 007488 335 AALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLAL-DKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQI 410 (601)
Q Consensus 335 ~aVk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l-~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~r~~~l 410 (601)
++|+ ++++.+|+|||++|||+++++..++.+ +++++++||+|++|+ ++++++++|.+|++
T Consensus 316 ~av~-----~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------- 379 (559)
T 3p9d_A 316 MGVR-----RCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSK----------- 379 (559)
T ss_dssp EEES-----SCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESS-----------
T ss_pred ceEc-----cCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCC-----------
Confidence 6664 778999999999999999998766665 889999999999998 57899999999875
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHH
Q 007488 411 RTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDA 489 (601)
Q Consensus 411 ~~~l~~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~ 489 (601)
+++|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++|+.+|++
T Consensus 380 ------------------------~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~ 435 (559)
T 3p9d_A 380 ------------------------HSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDN 435 (559)
T ss_dssp ------------------------SCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHH
T ss_pred ------------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999999 999999999999999999
Q ss_pred HhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CC------------eeeEecCCCcccchhh
Q 007488 490 IKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NH------------KYGYNAATGNYEDLMA 554 (601)
Q Consensus 490 ~~~~~~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~---~~------------~~Gid~~~g~i~d~~e 554 (601)
++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|+..| ++ ++|||+.+|+|.||++
T Consensus 436 ~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~ 514 (559)
T 3p9d_A 436 FATTVGSREQ-LAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIH 514 (559)
T ss_dssp HHTTSCTTHH-HHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTT
T ss_pred HhcccChHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhh
Confidence 9988877776 799999999999999999999999999999998753 33 7999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHchhHHHhCCCCCCCCC
Q 007488 555 AGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAM 595 (601)
Q Consensus 555 ~gI~Dp~~vk~~~L~~A~e~a~~lL~iD~iI~~~~~~~~~~ 595 (601)
.|||||+.||+++|++|+|+|++|||||++|...|++++..
T Consensus 515 ~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~~ 555 (559)
T 3p9d_A 515 AGVLEPTISKVKSLKSALEACVAILRIDTMITVDPEPPKED 555 (559)
T ss_dssp SSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCCCCCC
T ss_pred ccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCcccccC
Confidence 99999999999999999999999999999999988776543
No 8
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=2.5e-100 Score=851.58 Aligned_cols=465 Identities=26% Similarity=0.374 Sum_probs=427.4
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhh
Q 007488 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (601)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~ 142 (601)
..+-.+| .++|..|+.||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||. |+||+++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 84 (543)
T 3ruv_A 11 NMKRYMG--RDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPA----AKMLIEVAKT 84 (543)
T ss_dssp SEEEEET--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHH----HHHHHHHHHH
T ss_pred Ccchhcc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHH
Confidence 3456678 889999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccC--cH-HHHHHHHhhcCC----
Q 007488 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN---- 215 (601)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~~---- 215 (601)
||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||+++
T Consensus 85 qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~ 164 (543)
T 3ruv_A 85 QEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAE 164 (543)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGG
T ss_pred HHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999987 45 899999999763
Q ss_pred --hhHHHHHHHHHHHhhccC-Cc-----eEEe--cCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEeeec
Q 007488 216 --NYEVGNMIAEAMSKVGRK-GV-----VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVD 285 (601)
Q Consensus 216 --~~~ls~li~eAi~~vg~~-g~-----I~i~--~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~d 285 (601)
+++|++|+++|+.+++++ |. |+++ +|++++|+ ++++||+|+++|.|||| +++++||||+++|
T Consensus 165 ~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~m-------~~~~~n~kIll~~ 236 (543)
T 3ruv_A 165 KAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKERVSAQM-------PKKVTDAKIALLN 236 (543)
T ss_dssp GCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCCSCTTS-------CSEEEEEEEEEES
T ss_pred hhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccccCccc-------cccccCcEEEEEc
Confidence 789999999999999987 75 6664 89999998 99999999999999985 5579999999999
Q ss_pred cc-------------CCCHHH-----------HHHHHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEeecCC
Q 007488 286 KK-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPG 341 (601)
Q Consensus 286 ~~-------------i~~~~~-----------l~~~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk~~~ 341 (601)
++ |+++++ +.++++++.+.|+||||++++|+++++++|..+ +|++|+
T Consensus 237 ~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~~v~--- 307 (543)
T 3ruv_A 237 CAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKE------GIVAAR--- 307 (543)
T ss_dssp SCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHT------TCEEEC---
T ss_pred ccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHc------CcEEEe---
Confidence 84 566665 566789999999999999999999999999864 346666
Q ss_pred cCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEEEe---cCeEEEEcCCCChhhHHHHHHHHHHHHHhhh
Q 007488 342 FGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAE 418 (601)
Q Consensus 342 ~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~ 418 (601)
++++.+|+|||++|||++++ +++++++++||+|++|++. ++++++|++|+++
T Consensus 308 --~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------------------ 362 (543)
T 3ruv_A 308 --RVKKSDMEKLAKATGANVIA-----AIAALSAQDLGDAGLVEERKISGDSMIFVEECKHP------------------ 362 (543)
T ss_dssp --SCCHHHHHHHHHHHCCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSC------------------
T ss_pred --eCCHHHHHHHHHHhCCceec-----ccccCCHHHCCcccEEEEEEeCCceEEEEECCCCC------------------
Confidence 66799999999999999999 6899999999999999864 8899999999764
Q ss_pred hHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHhhcCChh
Q 007488 419 QDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDND 497 (601)
Q Consensus 419 ~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~ 497 (601)
..|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.++++.
T Consensus 363 -----------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~ 425 (543)
T 3ruv_A 363 -----------------KAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGR 425 (543)
T ss_dssp -----------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTT
T ss_pred -----------------ceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChH
Confidence 478999999999999999999999999999999999 99999999999999999999888787
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC----CCeeeEecCCCcccchhhcccccchHHHHHHHHHHHH
Q 007488 498 EEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD----NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASS 573 (601)
Q Consensus 498 eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~----~~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~~A~e 573 (601)
+| +++++|++||+.||++||+|||+|+.+++.+|+..| ++++|||+.+|+|.||++.|||||+.||+++|++|+|
T Consensus 426 eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~ 504 (543)
T 3ruv_A 426 EQ-LAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAE 504 (543)
T ss_dssp HH-HHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHH
Confidence 76 799999999999999999999999999999998754 3689999999999999999999999999999999999
Q ss_pred HHHHHHchhHHHhCCCCCCC
Q 007488 574 VAKTFLMSDCVVVEIKEPEP 593 (601)
Q Consensus 574 ~a~~lL~iD~iI~~~~~~~~ 593 (601)
+|++|||+|++|...|++.|
T Consensus 505 ~a~~iL~id~ii~~~~~~~~ 524 (543)
T 3ruv_A 505 STEMLLRIDDVIAAEKLRGA 524 (543)
T ss_dssp HHHHHHTCCEEEEEC-----
T ss_pred HHHHHHhHHhheecCccCCC
Confidence 99999999999999888654
No 9
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=1.7e-99 Score=840.20 Aligned_cols=460 Identities=22% Similarity=0.311 Sum_probs=427.4
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCC--CCcEEeechHHHhccccccCcccchHHHHHHHHHh
Q 007488 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKY--GAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (601)
Q Consensus 64 k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~--g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~ 141 (601)
.+-.|| .++|..|+.||+.|+++|++||||+||||||++++ |+|+|||||+||||+|+++||. |+||+++|+
T Consensus 3 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~----Akll~e~a~ 76 (513)
T 3iyg_B 3 ADEERA--ETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPA----AKVLVDMSR 76 (513)
T ss_pred cchhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHH----HHHHHHHHH
Confidence 455688 89999999999999999999999999999999999 9999999999999999999997 999999999
Q ss_pred hcccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccC-----cH-HHHHHHHhhcC-
Q 007488 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-----DS-ELADVAAVSAG- 214 (601)
Q Consensus 142 ~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~-----~~-~L~~va~ts~~- 214 (601)
+||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||++
T Consensus 77 ~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslss 156 (513)
T 3iyg_B 77 VQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSS 156 (513)
T ss_pred HhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999999999999999999987 34 89999998764
Q ss_pred -----ChhHHHHHHHHHHHhhccC---CceEEe--cCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEeee
Q 007488 215 -----NNYEVGNMIAEAMSKVGRK---GVVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (601)
Q Consensus 215 -----~~~~ls~li~eAi~~vg~~---g~I~i~--~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~ 284 (601)
++++|++|+++|+.+++++ +.|+++ +|++++|| ++++||+|+++|.+| |+++++||+|+++
T Consensus 157 K~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~~en~kIll~ 227 (513)
T 3iyg_B 157 KLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKRIENAKILIA 227 (513)
T ss_pred cccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC--------CceeecCceEEEE
Confidence 5689999999999999987 777773 69999999 999999999999886 5678999999999
Q ss_pred cc--------------cCCCHHHHHH-----------HHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEeec
Q 007488 285 DK--------------KITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (601)
Q Consensus 285 d~--------------~i~~~~~l~~-----------~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk~ 339 (601)
|+ .|++++++.+ +++++.+.|+||||++++|+++++++|..+ +|+||++
T Consensus 228 ~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~------~I~av~~ 301 (513)
T 3iyg_B 228 NTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAA------GVMAIEH 301 (513)
T ss_pred cCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHc------CceEEec
Confidence 98 4677777654 688999999999999999999999999865 6799998
Q ss_pred CCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEE---EecCeEEEEcCCCChhhHHHHHHHHHHHHHh
Q 007488 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (601)
Q Consensus 340 ~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~ 416 (601)
|+ +.+|+|||++|||++++ +++++++++||+|++|+ ++++++++|.+|++
T Consensus 302 ~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------------- 354 (513)
T 3iyg_B 302 AD-----FVGVERLALVTGGEIAS-----TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVAL----------------- 354 (513)
T ss_pred CC-----HHHHHHHHHHhCCEEec-----ccccCCHhHCCcccEEEEEEECCeEEEEEecCCC-----------------
Confidence 87 46799999999999999 68999999999999998 67889999999865
Q ss_pred hhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhc-CccccccHHHHHHHHHHHHHhhcCC
Q 007488 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEE-GIVVGGGCTLLRLSSKVDAIKETLD 495 (601)
Q Consensus 417 ~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~-gvvpGGGa~e~~ls~~L~~~~~~~~ 495 (601)
+++|||+|||+|+.+++|+||++|||+|++|+++++ ++|||||++|++|+.+|++++.+++
T Consensus 355 ------------------~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~ 416 (513)
T 3iyg_B 355 ------------------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTP 416 (513)
T ss_pred ------------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccC
Confidence 358999999999999999999999999999999999 5999999999999999999988877
Q ss_pred hhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCeeeEecCCCcccchhhcccccchHHHHHHHHHHH
Q 007488 496 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAS 572 (601)
Q Consensus 496 ~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~---~~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~~A~ 572 (601)
+.+| +++++|++||+.||++||+|||+|+.+++.+|+..| ++++|||+.+|+|.||++.|||||+.||+++|++|+
T Consensus 417 g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 495 (513)
T 3iyg_B 417 GKEA-VAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAA 495 (513)
T ss_pred cHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHHHH
Confidence 7776 799999999999999999999999999999998754 568999999999999999999999999999999999
Q ss_pred HHHHHHHchhHHHhCCCC
Q 007488 573 SVAKTFLMSDCVVVEIKE 590 (601)
Q Consensus 573 e~a~~lL~iD~iI~~~~~ 590 (601)
|+|++|||+|++|..+|+
T Consensus 496 ~~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 496 EAAEVILRVDNIIKAAPR 513 (513)
T ss_pred HHHHHHHHHHHHHhcCCC
Confidence 999999999999998763
No 10
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.2e-99 Score=846.47 Aligned_cols=469 Identities=23% Similarity=0.380 Sum_probs=423.7
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhh
Q 007488 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (601)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~ 142 (601)
..++.|| +++|..|+.||..|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||. |+||+++|++
T Consensus 13 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 86 (543)
T 1a6d_B 13 GTKRESG--KDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPA----AKMMVEVSKT 86 (543)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHH----HHHHHHHHTC
T ss_pred cchhhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchH----HHHHHHHHHh
Confidence 4568899 899999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccCc--H-HHHHHHHhhc------
Q 007488 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSA------ 213 (601)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~L~~va~ts~------ 213 (601)
||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++. . +|.++|+||+
T Consensus 87 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~ 166 (543)
T 1a6d_B 87 QDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSAS 166 (543)
T ss_dssp TTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGG
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999874 3 8999999774
Q ss_pred CChhHHHHHHHHHHHhhccC--Cc-------eEEe--cCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEe
Q 007488 214 GNNYEVGNMIAEAMSKVGRK--GV-------VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (601)
Q Consensus 214 ~~~~~ls~li~eAi~~vg~~--g~-------I~i~--~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIl 282 (601)
+++++|++|+++|+.+++++ |. |+++ +|++++|+ ++++||+|+++|.|||| +++++||+|+
T Consensus 167 ~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 238 (543)
T 1a6d_B 167 VAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGIIVDKEKVHPGM-------PDVVKDAKIA 238 (543)
T ss_dssp GGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEEEecCCCCCCC-------cceecCCeEE
Confidence 45799999999999999876 63 7775 99999999 99999999999999986 3568999999
Q ss_pred eeccc-------------CCCHHHH-----------HHHHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEee
Q 007488 283 LVDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (601)
Q Consensus 283 l~d~~-------------i~~~~~l-----------~~~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk 338 (601)
++|++ |++++++ .++++++.+.|+||||++++|+++|+++|..| +|+||+
T Consensus 239 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~------~I~av~ 312 (543)
T 1a6d_B 239 LLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRA------GIYAVR 312 (543)
T ss_dssp EESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHT------TCEEEC
T ss_pred EEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHC------CeeEec
Confidence 99998 7777775 78899999999999999999999999999987 457775
Q ss_pred cCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEEE---ecCeEEEEcCCCChhhHHHHHHHHHHHHH
Q 007488 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (601)
Q Consensus 339 ~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~r~~~l~~~l~ 415 (601)
++++++|+|||++|||++++ +++++++++||+|++|++ +++++++|++|+++
T Consensus 313 -----~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~--------------- 367 (543)
T 1a6d_B 313 -----RVKKSDMDKLAKATGASIVS-----TIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNP--------------- 367 (543)
T ss_dssp -----SCCHHHHHHHHHHHTCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSS---------------
T ss_pred -----cCCHHHHHHHHHHhCCceec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCC---------------
Confidence 78899999999999999998 789999999999999986 48899999998753
Q ss_pred hhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHhhcC
Q 007488 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (601)
Q Consensus 416 ~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~~~~ 494 (601)
++|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++|+.+|++++.++
T Consensus 368 --------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~ 427 (543)
T 1a6d_B 368 --------------------KAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKI 427 (543)
T ss_dssp --------------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHT
T ss_pred --------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhc
Confidence 589999999999999999999999999999999999 99999999999999999999877
Q ss_pred ChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCeeeEecCCCcccchhhcccccchHHHHHHHHHH
Q 007488 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHA 571 (601)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~---~~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~~A 571 (601)
++.+| +++++|++||+.||++||+|||+|+.+++.+|+..| +.++|||+.+|++.||++.|||||+.||+++|++|
T Consensus 428 ~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A 506 (543)
T 1a6d_B 428 GGRQQ-LAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESA 506 (543)
T ss_dssp CSSHH-HHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHH
T ss_pred CChHH-HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHH
Confidence 77766 799999999999999999999999999999998643 45899999999999999999999999999999999
Q ss_pred HHHHHHHHchhHHHhCCCCCCCCCCC
Q 007488 572 SSVAKTFLMSDCVVVEIKEPEPAMPA 597 (601)
Q Consensus 572 ~e~a~~lL~iD~iI~~~~~~~~~~~~ 597 (601)
+|+|++||++|++|...|++.|+.|+
T Consensus 507 ~e~a~~iL~id~iI~~~~~~~~~~~~ 532 (543)
T 1a6d_B 507 TEAAIMILRIDDVIATKSSSSSSNPP 532 (543)
T ss_dssp HHHHHHHHHEEEEEC-----------
T ss_pred HHHHHHHHHHHHHHhcCccCCCCCCC
Confidence 99999999999999998876554443
No 11
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=9e-100 Score=847.86 Aligned_cols=464 Identities=24% Similarity=0.367 Sum_probs=432.7
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhh
Q 007488 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (601)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~ 142 (601)
.+++.|| +++|..|++||+.|+++|+|||||+||||||++++|+|+|||||+||||+|+++||. |+||+++|++
T Consensus 15 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 88 (548)
T 1q3q_A 15 GTQRYVG--RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPA----AKMMVEVAKT 88 (548)
T ss_dssp TCEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHH
T ss_pred Ccceech--HHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchH----HHHHHHHHHh
Confidence 5778999 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccCc--H-HHHHHHHhhc------
Q 007488 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSA------ 213 (601)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~L~~va~ts~------ 213 (601)
||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++. . +|.++|+||+
T Consensus 89 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~ 168 (548)
T 1q3q_A 89 QDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAE 168 (548)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTG
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccc
Confidence 999999999999999999999999999999999999999999999999999999999874 4 8999999874
Q ss_pred CChhHHHHHHHHHHHhhccC--C-------ceEEe--cCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEe
Q 007488 214 GNNYEVGNMIAEAMSKVGRK--G-------VVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (601)
Q Consensus 214 ~~~~~ls~li~eAi~~vg~~--g-------~I~i~--~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIl 282 (601)
+++++|++|++||+.+++++ | +|+++ +|++++|| ++++||+|+++|.|||| +++++||||+
T Consensus 169 ~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 240 (548)
T 1q3q_A 169 SHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELVRGVVIDKEVVHPRM-------PKRVENAKIA 240 (548)
T ss_dssp GGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEESSEEESCCCSSTTS-------CSEESSEEEE
T ss_pred cchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEEeeEEEeccCCCCCC-------cceecCCEEE
Confidence 45799999999999999876 4 67775 99999999 99999999999999986 3568999999
Q ss_pred eeccc-------------CCCHHHH-----------HHHHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEee
Q 007488 283 LVDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (601)
Q Consensus 283 l~d~~-------------i~~~~~l-----------~~~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk 338 (601)
++|++ |++++++ .++++++.+.|+||||++++|+++++++|..| +|+||+
T Consensus 241 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~------~I~av~ 314 (548)
T 1q3q_A 241 LINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKY------GIMAVR 314 (548)
T ss_dssp EECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHT------TCEEEC
T ss_pred EEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHC------CcEEEc
Confidence 99998 7888876 78899999999999999999999999999988 457775
Q ss_pred cCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEEEe---cCeEEEEcCCCChhhHHHHHHHHHHHHH
Q 007488 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (601)
Q Consensus 339 ~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~r~~~l~~~l~ 415 (601)
++++++|+|||++|||++++ +++++++++||+|++|++. ++++++|++|++
T Consensus 315 -----~~~k~~le~ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---------------- 368 (548)
T 1q3q_A 315 -----RVKKSDMEKLAKATGAKIVT-----NVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKN---------------- 368 (548)
T ss_dssp -----SCCHHHHHHHHHHHCCCCBS-----SGGGCCGGGCEEESEEEEEEETTEEEEEEECCSS----------------
T ss_pred -----cCCHHHHHHHHHHhCCeEec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCC----------------
Confidence 78899999999999999998 7899999999999999864 889999999875
Q ss_pred hhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHhhcC
Q 007488 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (601)
Q Consensus 416 ~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~~~~ 494 (601)
+++|||+|||+|+.+++|+||++|||+|++|+++++| +|||||++|++|+.+|++++.++
T Consensus 369 -------------------~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~ 429 (548)
T 1q3q_A 369 -------------------PKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQV 429 (548)
T ss_dssp -------------------CSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHH
T ss_pred -------------------CCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhc
Confidence 3689999999999999999999999999999999999 99999999999999999998877
Q ss_pred ChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCeeeEecCCCcccchhhcccccchHHHHHHHHHH
Q 007488 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHA 571 (601)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~---~~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~~A 571 (601)
++.+| +++++|++||+.||++||+|||+|+.+++.+|+..| +.++|||+.+|++.||++.|||||+.||+++|++|
T Consensus 430 ~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A 508 (548)
T 1q3q_A 430 GGKEA-LAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSA 508 (548)
T ss_dssp CHHHH-HHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHH
T ss_pred CCcHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHHHHHHHHHH
Confidence 77666 899999999999999999999999999999998653 35899999999999999999999999999999999
Q ss_pred HHHHHHHHchhHHHhCCCCCC
Q 007488 572 SSVAKTFLMSDCVVVEIKEPE 592 (601)
Q Consensus 572 ~e~a~~lL~iD~iI~~~~~~~ 592 (601)
+|+|++||++|++|...|+++
T Consensus 509 ~e~a~~iL~iD~iI~~~~~~~ 529 (548)
T 1q3q_A 509 SEAAIMILRIDDVIAAKATKP 529 (548)
T ss_dssp HHHHHHHHTCCEEEECCC---
T ss_pred HHHHHHHHHHHHHHhcCCcCC
Confidence 999999999999999987764
No 12
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.8e-99 Score=844.93 Aligned_cols=463 Identities=23% Similarity=0.364 Sum_probs=425.8
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhh
Q 007488 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (601)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~ 142 (601)
..++.|| +++|..|+.||+.|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||. |+||+++|++
T Consensus 14 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 87 (545)
T 1a6d_A 14 GTQREQG--KNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPT----AKMIVEVSKA 87 (545)
T ss_dssp ---CEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHH----HHHHHGGGGC
T ss_pred cchhhch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchH----HHHHHHHHHh
Confidence 4568899 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccC-cH-HHHHHHHhhc------C
Q 007488 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DS-ELADVAAVSA------G 214 (601)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~-~~-~L~~va~ts~------~ 214 (601)
||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++| + +. +|.++|+||+ +
T Consensus 88 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~ 166 (545)
T 1a6d_A 88 QDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGL 166 (545)
T ss_dssp TTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCS
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999 7 55 8999999874 4
Q ss_pred ChhHHHHHHHHHHHhhccC---------CceEEe--cCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEee
Q 007488 215 NNYEVGNMIAEAMSKVGRK---------GVVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (601)
Q Consensus 215 ~~~~ls~li~eAi~~vg~~---------g~I~i~--~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll 283 (601)
++++|++|++||+.+++++ ++|+++ +|++++|| ++++||+|+++|.|||| +++++||+|++
T Consensus 167 ~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll 238 (545)
T 1a6d_A 167 SNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVIDKEKVHSKM-------PDVVKNAKIAL 238 (545)
T ss_dssp THHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEESCCCSCTTS-------CSEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEeccCCCCCC-------cceecCCEEEE
Confidence 6799999999999999876 368776 99999999 99999999999999986 35689999999
Q ss_pred eccc-------------CCCHHHH-----------HHHHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEeec
Q 007488 284 VDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (601)
Q Consensus 284 ~d~~-------------i~~~~~l-----------~~~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk~ 339 (601)
+|++ |++++++ .++++++.+.|+||||++++|+++|+++|+.| +|+||+
T Consensus 239 ~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~------~I~av~- 311 (545)
T 1a6d_A 239 IDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKE------GIYAVR- 311 (545)
T ss_dssp ECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHH------TCEEEC-
T ss_pred EecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC------CeeEec-
Confidence 9998 7777775 78899999999999999999999999999998 457775
Q ss_pred CCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEEEe---cCeEEEEcCCCChhhHHHHHHHHHHHHHh
Q 007488 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (601)
Q Consensus 340 ~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~r~~~l~~~l~~ 416 (601)
++++++|+|||++|||++++ +++++++++||+|++|++. ++++++|++|++
T Consensus 312 ----~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------------- 365 (545)
T 1a6d_A 312 ----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKN----------------- 365 (545)
T ss_dssp ----SCCHHHHHHHHHHHCCCEES-----SGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESC-----------------
T ss_pred ----cCCHHHHHHHHHHhCCeeec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCC-----------------
Confidence 78899999999999999998 7899999999999999864 789999999875
Q ss_pred hhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHhhcCC
Q 007488 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLD 495 (601)
Q Consensus 417 ~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~~~~~ 495 (601)
+++|||+|||+|+.+++|+||++|||+|++|+++++| +|||||++|++|+.+|++++.+++
T Consensus 366 ------------------~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~ 427 (545)
T 1a6d_A 366 ------------------PKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVG 427 (545)
T ss_dssp ------------------SSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSC
T ss_pred ------------------CceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccC
Confidence 3689999999999999999999999999999999999 999999999999999999998887
Q ss_pred hhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCeeeEecCCCcccchhhcccccchHHHHHHHHHHH
Q 007488 496 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAS 572 (601)
Q Consensus 496 ~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~---~~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~~A~ 572 (601)
+.+| +++++|++||+.||++||+|||+|+.+++.+|+..| +.++|||+.+|++.||++.|||||+.||+++|++|+
T Consensus 428 g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 506 (545)
T 1a6d_A 428 GREQ-LAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAV 506 (545)
T ss_dssp HHHH-HHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHH
T ss_pred ccHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHHHHHHHHHHH
Confidence 7766 899999999999999999999999999999998643 458999999999999999999999999999999999
Q ss_pred HHHHHHHchhHHHhCCCCCC
Q 007488 573 SVAKTFLMSDCVVVEIKEPE 592 (601)
Q Consensus 573 e~a~~lL~iD~iI~~~~~~~ 592 (601)
|+|++||++|++|...|+++
T Consensus 507 e~a~~iL~id~iI~~~~~~~ 526 (545)
T 1a6d_A 507 EVATMILRIDDVIASKKSTP 526 (545)
T ss_dssp HHHHHHHTCCEEC-------
T ss_pred HHHHHHHHHHHHHhcccCCC
Confidence 99999999999999988763
No 13
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.2e-98 Score=833.23 Aligned_cols=456 Identities=20% Similarity=0.293 Sum_probs=420.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 007488 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (601)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~qd~~~GDGT 151 (601)
.+++..|+.||..|+++|+|||||+||||||+++.|+|+|||||+|||++|+++||+ |+|++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (515)
T 3iyg_H 10 IPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPA----AKTLVDIAKSQDAEVGDGT 85 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhhceeCcch
Confidence 779999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccC--c----H-HHHHHHHhhcC------ChhH
Q 007488 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--D----S-ELADVAAVSAG------NNYE 218 (601)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~----~-~L~~va~ts~~------~~~~ 218 (601)
||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++ + . .|.++|+||++ ++++
T Consensus 86 TtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~ 165 (515)
T 3iyg_H 86 TSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAF 165 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHH
Confidence 99999999999999999999999999999999999999999999999984 4 3 67999998864 5789
Q ss_pred HHHHHHHHHHhhccC---CceEEe--cCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEeeeccc------
Q 007488 219 VGNMIAEAMSKVGRK---GVVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (601)
Q Consensus 219 ls~li~eAi~~vg~~---g~I~i~--~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~d~~------ 287 (601)
|++|+++|+.+++.+ ++|+++ +|++++|+ ++++||+|+++|.||||.++| .+++||+|+++|++
T Consensus 166 i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~~p----~~~en~kIll~~~~Le~~k~ 240 (515)
T 3iyg_H 166 FAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEMQP----KKYHNPMIALLNVELELKAE 240 (515)
T ss_pred HHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCcccccCC----ccccccEEEEEccccccccc
Confidence 999999999999876 777763 68899998 999999999999999997654 47999999999994
Q ss_pred -------CCCHHHH-----------HHHHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEeecCCcCCcchhH
Q 007488 288 -------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (601)
Q Consensus 288 -------i~~~~~l-----------~~~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk~~~~g~~~~~~ 349 (601)
|++++++ .++++++.+.|+||||++++|++.++++|..+ |+ ++ ++++++.+
T Consensus 241 e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~---gI---~~-----v~~~~k~~ 309 (515)
T 3iyg_H 241 KDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR---DM---FC-----AGRVPEED 309 (515)
T ss_pred ccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHc---CC---cc-----cccccHHH
Confidence 6787776 56689999999999999999999888877543 43 43 45788999
Q ss_pred HHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEEEe---cCeEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHH
Q 007488 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (601)
Q Consensus 350 L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~~~~~~~l 426 (601)
|+|||++|||++++ +++++++++||+|++|++. ++++++|++|+++
T Consensus 310 leria~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~-------------------------- 358 (515)
T 3iyg_H 310 LKRTMMACGGSIQT-----SVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKA-------------------------- 358 (515)
T ss_pred HHHHHHHhCCEEee-----ccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC--------------------------
Confidence 99999999999999 6899999999999999854 7899999998764
Q ss_pred HHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHhhcCChhhHHHHHHH
Q 007488 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (601)
Q Consensus 427 ~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~~~~ 505 (601)
..|||+|||+|+.+++|+||+++||+|++|++++++ +|||||++|++++.+|++++.++++.+| +++++
T Consensus 359 ---------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~ 428 (515)
T 3iyg_H 359 ---------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQ-LLIGA 428 (515)
T ss_pred ---------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHH-HHHHH
Confidence 479999999999999999999999999999999985 9999999999999999999988878776 79999
Q ss_pred HHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCeeeEecCCCcccchhhcccccchHHHHHHHHHHHHHHHHHHchh
Q 007488 506 VKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSD 582 (601)
Q Consensus 506 ~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~---~~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~~A~e~a~~lL~iD 582 (601)
|++||+.||++||+|||+|+.+++.+|+..| ++++|||+.+|+|.||++.|||||+.||+++|++|+|+|++|||||
T Consensus 429 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~iD 508 (515)
T 3iyg_H 429 YAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVD 508 (515)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998764 4579999999999999999999999999999999999999999999
Q ss_pred HHHhCC
Q 007488 583 CVVVEI 588 (601)
Q Consensus 583 ~iI~~~ 588 (601)
++|..+
T Consensus 509 ~ii~~~ 514 (515)
T 3iyg_H 509 ETIKNP 514 (515)
T ss_pred HHhcCC
Confidence 999754
No 14
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=5.6e-100 Score=846.14 Aligned_cols=464 Identities=21% Similarity=0.290 Sum_probs=427.9
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhh
Q 007488 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (601)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~ 142 (601)
.|+..|| .++|..|+.||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~ 84 (528)
T 3p9d_D 11 FKNKEKP--QEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPV----ARMLVEVSAA 84 (528)
T ss_dssp SCBCCCH--HHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTT----HHHHHHHHHH
T ss_pred cchhcch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHH----HHHHHHHHHH
Confidence 5889999 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccC--cH-HHHHHHHhhcCC----
Q 007488 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN---- 215 (601)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~~---- 215 (601)
||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||+++
T Consensus 85 qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~ 164 (528)
T 3p9d_D 85 QDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVS 164 (528)
T ss_dssp HHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCS
T ss_pred hhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999987 55 899999999864
Q ss_pred --hhHHHHHHHHHHHhhcc--CCceEE-------ecCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEeee
Q 007488 216 --NYEVGNMIAEAMSKVGR--KGVVTL-------EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (601)
Q Consensus 216 --~~~ls~li~eAi~~vg~--~g~I~i-------~~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~ 284 (601)
+++|++|+++|+.++++ +|.|.+ .+|++++|+ ++++||+|+++|.||+| |+++++||||+++
T Consensus 165 ~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~~ien~kIll~ 237 (528)
T 3p9d_D 165 QYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPTRKEKAKIGLI 237 (528)
T ss_dssp TTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCSEESSEEEEEE
T ss_pred hhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc------CcccccCceEEEE
Confidence 79999999999999987 454433 359999998 99999999999999986 6778999999999
Q ss_pred cccCC-------------CHHH-----------HHHHHHHHHhcCCCEEEEcccc-----cHHHHHHHHHhhhcccceEE
Q 007488 285 DKKIT-------------NARD-----------LINVLEDAIRGAYPILIIAEDI-----EQEALATLVVNKLRGALKIA 335 (601)
Q Consensus 285 d~~i~-------------~~~~-----------l~~~le~~~~~~~~lvI~a~~I-----~~~aL~~L~~nk~~g~~~i~ 335 (601)
+++++ ++++ +.++++++.+.|+||||++++| +++++++|..| +|+
T Consensus 238 ~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~------~I~ 311 (528)
T 3p9d_D 238 QFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKL------NIM 311 (528)
T ss_dssp CCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTT------SCC
T ss_pred eccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHc------CcE
Confidence 99865 4443 6788999999999999999999 99999999876 468
Q ss_pred EeecCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEEE---ecCeEEEEcCCCChhhHHHHHHHHHH
Q 007488 336 ALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRT 412 (601)
Q Consensus 336 aVk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~r~~~l~~ 412 (601)
||+ ++++.+|+|||++|||++++ +++++++++||+|++|++ +++++++|.+|....
T Consensus 312 av~-----~~~k~~le~ia~~tGa~ii~-----~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~----------- 370 (528)
T 3p9d_D 312 VVK-----DIEREEIEFLSKGLGCKPIA-----DIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN----------- 370 (528)
T ss_dssp EEE-----CCCTHHHHHHHHHHTCCCCS-----CSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGG-----------
T ss_pred EEE-----eCCHHHHHHHHHHHCCEEec-----ccccCCHHHCCcccEEEEEEECCEEEEEEEcccccC-----------
Confidence 887 56689999999999999999 578999999999999974 467888998875210
Q ss_pred HHHhhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHh
Q 007488 413 LIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIK 491 (601)
Q Consensus 413 ~l~~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~ 491 (601)
.+++|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++|+.+|++++
T Consensus 371 ---------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~ 429 (528)
T 3p9d_D 371 ---------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEA 429 (528)
T ss_dssp ---------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCC
T ss_pred ---------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHh
Confidence 14689999999999999999999999999999999999 99999999999999999998
Q ss_pred hcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCeeeEecCCCcccchhhcccccchHHHHHHH
Q 007488 492 ETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCL 568 (601)
Q Consensus 492 ~~~~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~---~~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L 568 (601)
.++++.+| +++++|++||+.||++||+|||+|+.+++.+|+..| ++++|||+.+|+|.||++.|||||+.||+++|
T Consensus 430 ~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al 508 (528)
T 3p9d_D 430 RSMEGVQA-FIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAI 508 (528)
T ss_dssp TTSCHHHH-TTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHH
T ss_pred hccChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHHHHHHHH
Confidence 87777776 799999999999999999999999999999998764 46899999999999999999999999999999
Q ss_pred HHHHHHHHHHHchhHHHhCC
Q 007488 569 EHASSVAKTFLMSDCVVVEI 588 (601)
Q Consensus 569 ~~A~e~a~~lL~iD~iI~~~ 588 (601)
++|+|+|++|||||+||..+
T Consensus 509 ~~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 509 TLASECVKSILRIDDIAFSR 528 (528)
T ss_dssp HHHHHHHHHHHHCSCCCBCC
T ss_pred HHHHHHHHHHHhhhHheecC
Confidence 99999999999999998753
No 15
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.2e-98 Score=832.70 Aligned_cols=464 Identities=22% Similarity=0.293 Sum_probs=424.4
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhhcc
Q 007488 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (601)
Q Consensus 65 ~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~qd 144 (601)
+-.|| .++|..|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||. |+|++++|++||
T Consensus 4 ~~~~g--~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd 77 (529)
T 3iyg_A 4 DRSTG--EAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKVLCELADLQD 77 (529)
T ss_pred chhch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChH----HHHHHHHHHHhh
Confidence 45678 899999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred cccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHh-cccccC--cH-HHHHHHHhhcC------
Q 007488 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVE--DS-ELADVAAVSAG------ 214 (601)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~-~s~~v~--~~-~L~~va~ts~~------ 214 (601)
+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|++ +++|++ +. +|.++|+||++
T Consensus 78 ~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~ 157 (529)
T 3iyg_A 78 KEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGI 157 (529)
T ss_pred hhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccc
Confidence 999999999999999999999999999999999999999999999999998 999987 44 89999999874
Q ss_pred ChhHHHHHHHHHHHhhc---cCC-----c--eEE--ecCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEe
Q 007488 215 NNYEVGNMIAEAMSKVG---RKG-----V--VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (601)
Q Consensus 215 ~~~~ls~li~eAi~~vg---~~g-----~--I~i--~~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIl 282 (601)
++++|++|++||+.+++ ++| + |++ .+|++++|| ++++||+|+++|.||+| ++.++||||+
T Consensus 158 ~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 229 (529)
T 3iyg_A 158 NGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGYALNCVVGSQGM-------PKRIVNAKIA 229 (529)
T ss_pred cHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeeeEEecCcccccC-------CcccCCceEE
Confidence 57999999999999997 344 2 544 589999998 99999999999999985 4468899999
Q ss_pred eecccC-------------CCHHH-----------HHHHHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEee
Q 007488 283 LVDKKI-------------TNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (601)
Q Consensus 283 l~d~~i-------------~~~~~-----------l~~~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk 338 (601)
++++++ +++++ +.++++++.+.|+||||++++|+++++++|..| +|+||+
T Consensus 230 ll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~------gI~av~ 303 (529)
T 3iyg_A 230 CLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEA------GAMAVR 303 (529)
T ss_pred EecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHc------CCceec
Confidence 999864 44433 456788999999999999999999999999998 457776
Q ss_pred cCCcCCcchhHHHHHHHHhCCeEeeccCCcc-ccCCCCCCceeeeEEE---EecCeEEEEcCCCChhhHHHHHHHHHHHH
Q 007488 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLA-LDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLI 414 (601)
Q Consensus 339 ~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~-l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~r~~~l~~~l 414 (601)
++++++|+|||++|||+++++..+++ .+++++++||+|+.|+ ++++++++|++|+++
T Consensus 304 -----~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-------------- 364 (529)
T 3iyg_A 304 -----RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKAR-------------- 364 (529)
T ss_pred -----cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCC--------------
Confidence 67799999999999999999655444 2456788999999998 789999999998764
Q ss_pred HhhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHhhc
Q 007488 415 ENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKET 493 (601)
Q Consensus 415 ~~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~~~ 493 (601)
++|||+|||+|+.+++|.||++|||+|++|+++++| +||||||+|++|+.+|++++.+
T Consensus 365 ---------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~ 423 (529)
T 3iyg_A 365 ---------------------TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATS 423 (529)
T ss_pred ---------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhh
Confidence 489999999999999999999999999999999999 9999999999999999999988
Q ss_pred CChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---C--------CeeeEecCCCcccchhhcccccchH
Q 007488 494 LDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---N--------HKYGYNAATGNYEDLMAAGIIDPTK 562 (601)
Q Consensus 494 ~~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~---~--------~~~Gid~~~g~i~d~~e~gI~Dp~~ 562 (601)
+++.+| +++++|++||+.||++||+|||+|+.+++.+|+..| + .++|||+.+|++.||++.|||||+.
T Consensus 424 ~~g~eq-~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~ 502 (529)
T 3iyg_A 424 MGSREQ-LAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTI 502 (529)
T ss_pred cCChHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHH
Confidence 888877 799999999999999999999999999999998754 2 5799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHchhHHHhCCC
Q 007488 563 VVRCCLEHASSVAKTFLMSDCVVVEIK 589 (601)
Q Consensus 563 vk~~~L~~A~e~a~~lL~iD~iI~~~~ 589 (601)
||+++|++|+|+|++|||||++|...|
T Consensus 503 vk~~al~~A~e~a~~iL~iD~ii~~~~ 529 (529)
T 3iyg_A 503 VKVKSLKFATEAAITILRIDDLIKLHP 529 (529)
T ss_pred HHHHHHHHHHHHHHHHHhHHhhhcCCC
Confidence 999999999999999999999998743
No 16
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=4.5e-100 Score=847.80 Aligned_cols=467 Identities=22% Similarity=0.331 Sum_probs=425.4
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeec-CCCCcEEeechHHHhccccccCcccchHHHHHHHHHh
Q 007488 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLES-KYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (601)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~-~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~ 141 (601)
.+++.|| +++|..|+.||+.|+++|++||||+||||||++ ++|+|+|||||+||||+|+++||. |+|++++|+
T Consensus 9 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~----Akll~e~a~ 82 (527)
T 3p9d_B 9 QVTEERA--ENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPA----AKVLVNISK 82 (527)
T ss_dssp CEEEEES--HHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHH----HHHHHHHHH
T ss_pred cchhhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHH----HHHHHHHHH
Confidence 5789999 999999999999999999999999999999999 899999999999999999999997 999999999
Q ss_pred hcccccCCcccHHHHHHHHHHHHHHHHHHC-CCChHHHHHHHHHHHHHHHHHHHhcccccCc-----H-HHHHHHHhhcC
Q 007488 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAA-GANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAG 214 (601)
Q Consensus 142 ~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~-g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~-~L~~va~ts~~ 214 (601)
+||+++||||||+||||++||+++.+++.+ |+||+.|++||++|++.++++|+++++++++ . +|.+||+||++
T Consensus 83 ~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~ 162 (527)
T 3p9d_B 83 VQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLS 162 (527)
T ss_dssp HHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHT
T ss_pred HhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccc
Confidence 999999999999999999999999999999 9999999999999999999999999999875 4 89999999987
Q ss_pred C------hhHHHHHHHHHHHhhccCC---ceEEe--cCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEee
Q 007488 215 N------NYEVGNMIAEAMSKVGRKG---VVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (601)
Q Consensus 215 ~------~~~ls~li~eAi~~vg~~g---~I~i~--~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll 283 (601)
+ +++|++|++||+.++++++ +|+++ .|++++|+ ++++||+|+++|.||| |+ .++||+|++
T Consensus 163 sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~----p~----~~~n~kIll 233 (527)
T 3p9d_B 163 SKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ----PK----RIENAKILI 233 (527)
T ss_dssp TSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC----CS----CCSSCEEEE
T ss_pred cCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC----Ce----eeecceEEE
Confidence 5 6899999999999999987 77774 69999998 9999999999999997 23 468999999
Q ss_pred eccc--------------CCCHHHH-----------HHHHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEee
Q 007488 284 VDKK--------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (601)
Q Consensus 284 ~d~~--------------i~~~~~l-----------~~~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk 338 (601)
++++ |++++++ .+.++++.+.|+||||++++|+++++++|..| +|++|+
T Consensus 234 l~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~------~i~av~ 307 (527)
T 3p9d_B 234 ANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDL------GINSIE 307 (527)
T ss_dssp ECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHT------CBCCCC
T ss_pred eccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHC------CCEEEe
Confidence 8875 4555554 56789999999999999999999999999987 468888
Q ss_pred cCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEE---EecCeEEEEcCCCChhhHHHHHHHHHHHHH
Q 007488 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (601)
Q Consensus 339 ~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~r~~~l~~~l~ 415 (601)
+++ +.+|+|||++|||++++ ++++++++.||+|+.|+ ++++++++|.+|++
T Consensus 308 ~~~-----~~dle~ia~~tGa~iv~-----~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---------------- 361 (527)
T 3p9d_B 308 HAD-----FEGVERLALVTGGEVVS-----TFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKA---------------- 361 (527)
T ss_dssp CCH-----HHHHHHHHHHTCCCCCS-----TTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCC----------------
T ss_pred cCC-----HHHHHHHHHHhCCEEec-----chhhCCHHHCCCCcEEEEEEecceEEEEEECCCC----------------
Confidence 665 56799999999999998 68899999999999998 57889999999875
Q ss_pred hhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHhhcC
Q 007488 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (601)
Q Consensus 416 ~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~~~~ 494 (601)
+++|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++++.+|++++.++
T Consensus 362 -------------------~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~ 422 (527)
T 3p9d_B 362 -------------------GEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNI 422 (527)
T ss_dssp -------------------SCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHH
T ss_pred -------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhcc
Confidence 3699999999999999999999999999999999999 99999999999999999998877
Q ss_pred ChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCeeeEecCCCcccchhhcccccchHHHHHHHHHH
Q 007488 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHA 571 (601)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~---~~~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~~A 571 (601)
++.+| +++++|++||+.||++||+|||+|+.+++.+|+.. +++++|||+.+|+|.||++.|||||+.||+++|++|
T Consensus 423 ~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A 501 (527)
T 3p9d_B 423 DGKKS-LAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSA 501 (527)
T ss_dssp CSHHH-HHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHH
T ss_pred CcHHH-HHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHH
Confidence 77766 79999999999999999999999999999999875 356899999999999999999999999999999999
Q ss_pred HHHHHHHHchhHHHhCCCCCCCCCC
Q 007488 572 SSVAKTFLMSDCVVVEIKEPEPAMP 596 (601)
Q Consensus 572 ~e~a~~lL~iD~iI~~~~~~~~~~~ 596 (601)
+|+|++|||+|++|..+|+++..+|
T Consensus 502 ~e~a~~iL~id~ii~~~~~~~~~~~ 526 (527)
T 3p9d_B 502 SEAAEVLLRVDNIIRARPRTANRQH 526 (527)
T ss_dssp HHHHHHHHHCCEEEEEC--------
T ss_pred HHHHHHHHhHHHHHhcCCcccCCCC
Confidence 9999999999999999988876655
No 17
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=2.4e-99 Score=844.16 Aligned_cols=468 Identities=19% Similarity=0.276 Sum_probs=426.3
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhh
Q 007488 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (601)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~ 142 (601)
..+-.+| .+++..|+.||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 16 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~ 89 (550)
T 3p9d_G 16 GTDASQG--KGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPA----AKTLVDISRA 89 (550)
T ss_dssp CCCEEES--HHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHH----HHHHHHHHHH
T ss_pred Ccchhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHH
Confidence 3456678 899999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccCc-----H-HHHHHHHhhcC--
Q 007488 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAG-- 214 (601)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~-~L~~va~ts~~-- 214 (601)
||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++. . +|.++|+||++
T Consensus 90 qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK 169 (550)
T 3p9d_G 90 QDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSK 169 (550)
T ss_dssp HHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHT
T ss_pred hhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCc
Confidence 999999999999999999999999999999999999999999999999999999999853 4 79999999863
Q ss_pred ----ChhHHHHHHHHHHHhhcc-C------CceEEecCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEee
Q 007488 215 ----NNYEVGNMIAEAMSKVGR-K------GVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (601)
Q Consensus 215 ----~~~~ls~li~eAi~~vg~-~------g~I~i~~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll 283 (601)
++++|++|++||+.++++ + +++++ +|++++|| ++++||+|+++|.||||.+. +..++||+|++
T Consensus 170 ~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~ds-~lv~G~~~dk~~~s~yf~~~----~~~~en~kIll 243 (550)
T 3p9d_G 170 LIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEES-LFINGVAFKKTFSYAGFEQQ----PKKFNNPKILS 243 (550)
T ss_dssp TTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGGC-CCCSSEEECCCSSCTTCSCS----CSCCSSCCEEE
T ss_pred cccccHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccce-eEEeeEEEeccccccccccC----cccccCceEEE
Confidence 479999999999999984 3 55665 69999999 99999999999999999764 44599999999
Q ss_pred eccc-------------CCCHHHHHH-----------HHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEeec
Q 007488 284 VDKK-------------ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (601)
Q Consensus 284 ~d~~-------------i~~~~~l~~-----------~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk~ 339 (601)
+|++ |++++++.+ +++++.+.|++|||++++|++.++++|..+ +|+++
T Consensus 244 ~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~------gI~~v-- 315 (550)
T 3p9d_G 244 LNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADR------NIFCA-- 315 (550)
T ss_dssp ECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGG------TCEEE--
T ss_pred eccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHc------CCccc--
Confidence 9997 566666544 678899999999999999999888877543 34544
Q ss_pred CCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEEE---ecCeEEEEcCCCChhhHHHHHHHHHHHHHh
Q 007488 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (601)
Q Consensus 340 ~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~ 416 (601)
+++++.+|++||++|||++++ ++++++++.||+|+.|++ +++++++|++|+++
T Consensus 316 ---~~v~k~~lerIa~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~---------------- 371 (550)
T 3p9d_G 316 ---GRVSADDMNRVIQAVGGSIQS-----TTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQA---------------- 371 (550)
T ss_dssp ---ECCCTTHHHHHHHHTCCCCBS-----SGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTC----------------
T ss_pred ---cCcCHHHHHHHHHHhCCceec-----chhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCC----------------
Confidence 477899999999999999998 689999999999999975 68899999998753
Q ss_pred hhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHhhcCC
Q 007488 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLD 495 (601)
Q Consensus 417 ~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~~~~~ 495 (601)
++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++|+.+|++++.+++
T Consensus 372 -------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~ 432 (550)
T 3p9d_G 372 -------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIA 432 (550)
T ss_dssp -------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCC
T ss_pred -------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCC
Confidence 589999999999999999999999999999999999 999999999999999999988887
Q ss_pred hhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCeeeEecCCCcccchhhcccccchHHHHHHHHHHH
Q 007488 496 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAS 572 (601)
Q Consensus 496 ~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~---~~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~~A~ 572 (601)
+.+| +++++|++||+.||++||+|||+|+.+++.+|+..| ++++|||+.+|+|.||++.|||||+.||+++|++|+
T Consensus 433 g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 511 (550)
T 3p9d_G 433 GKQQ-MIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSAT 511 (550)
T ss_dssp STTH-HHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHH
T ss_pred hHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHH
Confidence 8776 799999999999999999999999999999998754 568999999999999999999999999999999999
Q ss_pred HHHHHHHchhHHHhCCCCCCCC
Q 007488 573 SVAKTFLMSDCVVVEIKEPEPA 594 (601)
Q Consensus 573 e~a~~lL~iD~iI~~~~~~~~~ 594 (601)
|+|++||+||++|..+|++++.
T Consensus 512 ~~a~~iL~id~ii~~~~~~~~~ 533 (550)
T 3p9d_G 512 EATNLILSVDETITNKGSESAN 533 (550)
T ss_dssp HHHHHHHTEEEEECCCCCC---
T ss_pred HHHHHHHhHHHHhhCCCccccc
Confidence 9999999999999998887654
No 18
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.5e-97 Score=823.65 Aligned_cols=458 Identities=21% Similarity=0.311 Sum_probs=419.2
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhhc
Q 007488 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (601)
Q Consensus 64 k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~q 143 (601)
++-.|| .++|..|+.||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++|
T Consensus 3 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~----Akll~~~a~~q 76 (515)
T 3iyg_E 3 KSRLMG--LEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQI----AKLMVELSKSQ 76 (515)
T ss_pred chhhch--HHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHH----HHHHHHHHHHh
Confidence 445688 999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccCc----H-HHHHHHHhhcCC---
Q 007488 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED----S-ELADVAAVSAGN--- 215 (601)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~----~-~L~~va~ts~~~--- 215 (601)
|+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++. . +|.++|+||+++
T Consensus 77 d~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i 156 (515)
T 3iyg_E 77 DDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVV 156 (515)
T ss_pred hhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccch
Confidence 99999999999999999999999999999999999999999999999999999998854 3 899999999874
Q ss_pred ---hhHHHHHHHHHHHhhccC-------CceEE--ecCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEee
Q 007488 216 ---NYEVGNMIAEAMSKVGRK-------GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (601)
Q Consensus 216 ---~~~ls~li~eAi~~vg~~-------g~I~i--~~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll 283 (601)
.+.|+++++||+..+.+. +.|++ .+|++++|+ ++++||+|+++|.||||++ .++||+|++
T Consensus 157 ~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~m~~-------~~~~~kIal 228 (515)
T 3iyg_E 157 NSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQMPK-------QVEDAKIAI 228 (515)
T ss_pred hHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEEEecccccccccc-------cCCCceEEE
Confidence 478999999999998652 23444 579999998 9999999999999998754 356778877
Q ss_pred eccc-------------CCCHHHH-----------HHHHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEeec
Q 007488 284 VDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (601)
Q Consensus 284 ~d~~-------------i~~~~~l-----------~~~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk~ 339 (601)
++++ |++++++ .++++++.+.|+||||++++|+++++++|+.|++ .+|+.
T Consensus 229 l~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I------~~v~~ 302 (515)
T 3iyg_E 229 LTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDL------PAVRW 302 (515)
T ss_pred EcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCC------EEEec
Confidence 7664 5677765 5789999999999999999999999999999854 56664
Q ss_pred CCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEEE-----ecCeEEEEcCCCChhhHHHHHHHHHHHH
Q 007488 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL-----TKDTTTIVGDGSTQDAVSKRVAQIRTLI 414 (601)
Q Consensus 340 ~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i-----~~~~~~~i~~~~~~~~i~~r~~~l~~~l 414 (601)
+++.+|+|||++|||++++ +++++++++||+|++|++ +++++++|++|+++
T Consensus 303 -----v~k~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~-------------- 358 (515)
T 3iyg_E 303 -----VGGPEIELIAIATGGRIVP-----RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNS-------------- 358 (515)
T ss_pred -----cCHHHHHHHHHHhCCEEec-----ccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCC--------------
Confidence 4589999999999999998 689999999999999986 45899999999764
Q ss_pred HhhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHhhc
Q 007488 415 ENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKET 493 (601)
Q Consensus 415 ~~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~~~ 493 (601)
..|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++|+.+|++++.+
T Consensus 359 ---------------------~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~ 417 (515)
T 3iyg_E 359 ---------------------RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADK 417 (515)
T ss_pred ---------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhcc
Confidence 478999999999999999999999999999999999 9999999999999999999988
Q ss_pred CChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc----CCCeeeEecCCCcccchhhcccccchHHHHHHHH
Q 007488 494 LDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS----DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLE 569 (601)
Q Consensus 494 ~~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~----~~~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~ 569 (601)
+++.+| +++++|++||+.||++||+|||+|+.+++.+|+.. +++++|||+.+|+|.||++.|||||+.||+++|+
T Consensus 418 ~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~ 496 (515)
T 3iyg_E 418 CPTLEQ-YAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQIS 496 (515)
T ss_pred CCcHHH-HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHH
Confidence 877776 89999999999999999999999999999999864 3468999999999999999999999999999999
Q ss_pred HHHHHHHHHHchhHHHhC
Q 007488 570 HASSVAKTFLMSDCVVVE 587 (601)
Q Consensus 570 ~A~e~a~~lL~iD~iI~~ 587 (601)
+|+|+|++|||||++|..
T Consensus 497 ~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 497 LATQMVRMILKIDDIRKP 514 (515)
T ss_pred HHHHHHHHHHhHHHhhcC
Confidence 999999999999999875
No 19
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.3e-97 Score=823.96 Aligned_cols=458 Identities=22% Similarity=0.304 Sum_probs=419.2
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhhcc
Q 007488 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (601)
Q Consensus 65 ~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~qd 144 (601)
+-.+| .++|..|+.||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||
T Consensus 5 ~~~~g--~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd 78 (518)
T 3iyg_D 5 DRDKP--AQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPA----ARMLVELSKAQD 78 (518)
T ss_pred cchhh--HHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHH----HHHHHHHHHHhh
Confidence 33456 789999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccC--cH-HHHHHHHhhcCCh-----
Q 007488 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGNN----- 216 (601)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~L~~va~ts~~~~----- 216 (601)
+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||++++
T Consensus 79 ~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~ 158 (518)
T 3iyg_D 79 IEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQY 158 (518)
T ss_pred hhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhh
Confidence 999999999999999999999999999999999999999999999999999999987 45 8999999999864
Q ss_pred -hHHHHHHHHHHHhhcc---CCc-----eEEe--cCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEeeec
Q 007488 217 -YEVGNMIAEAMSKVGR---KGV-----VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVD 285 (601)
Q Consensus 217 -~~ls~li~eAi~~vg~---~g~-----I~i~--~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~d 285 (601)
++|++|++||+.++++ +|. |+++ +|++++|+ ++++||+|+++|.| . ||..++||+|++++
T Consensus 159 ~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~-~-------mp~~i~n~kIlll~ 229 (518)
T 3iyg_D 159 SSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN-S-------GITRVEKAKIGLIQ 229 (518)
T ss_pred HHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc-C-------CCccccCceEEEEE
Confidence 8999999999999985 554 6653 78999998 99999999999987 2 34457888888888
Q ss_pred ccC-------------CCHH-----------HHHHHHHHHHhcCCCEEEE-----cccccHHHHHHHHHhhhcccceEEE
Q 007488 286 KKI-------------TNAR-----------DLINVLEDAIRGAYPILII-----AEDIEQEALATLVVNKLRGALKIAA 336 (601)
Q Consensus 286 ~~i-------------~~~~-----------~l~~~le~~~~~~~~lvI~-----a~~I~~~aL~~L~~nk~~g~~~i~a 336 (601)
+++ ++++ ++.++++++.+.|+||||+ +++|+++++++|..| +|+|
T Consensus 230 ~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~------~I~a 303 (518)
T 3iyg_D 230 FCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKM------KIMV 303 (518)
T ss_pred eeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHc------CcEE
Confidence 764 4554 3577899999999999999 899999999999987 6799
Q ss_pred eecCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEEE---ec-CeEEEEcCCCChhhHHHHHHHHHH
Q 007488 337 LKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TK-DTTTIVGDGSTQDAVSKRVAQIRT 412 (601)
Q Consensus 337 Vk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~-~~~~~i~~~~~~~~i~~r~~~l~~ 412 (601)
|++|+ +.+|+|||++|||++++ +++++++++||+|++|++ ++ +++++|++|++
T Consensus 304 v~~~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~------------- 360 (518)
T 3iyg_D 304 VKDIE-----REDIEFICKTIGTKPVA-----HVDQFTADMLGSAELAEEVSLNGSGKLIKITGCAS------------- 360 (518)
T ss_pred EecCC-----HHHHHHHHHHhCCEEec-----ccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCC-------------
Confidence 99887 46799999999999999 689999999999999985 34 68899999864
Q ss_pred HHHhhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHh
Q 007488 413 LIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIK 491 (601)
Q Consensus 413 ~l~~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~ 491 (601)
++++|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++|+.+|++++
T Consensus 361 ---------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~ 419 (518)
T 3iyg_D 361 ---------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYS 419 (518)
T ss_pred ---------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHh
Confidence 24699999999999999999999999999999999999 99999999999999999999
Q ss_pred hcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCeeeEecCCCcccchhhcccccchHHHHHHH
Q 007488 492 ETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCL 568 (601)
Q Consensus 492 ~~~~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~---~~~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L 568 (601)
.++++.+| +++++|++||+.||++||+|||+|+.+++.+|+.. +++++|||+.+|+|.||++.|||||+.||+++|
T Consensus 420 ~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al 498 (518)
T 3iyg_D 420 RTLSGMES-YCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSAL 498 (518)
T ss_pred hcCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHHHHHHHH
Confidence 88877776 79999999999999999999999999999999874 346899999999999999999999999999999
Q ss_pred HHHHHHHHHHHchhHHHhCC
Q 007488 569 EHASSVAKTFLMSDCVVVEI 588 (601)
Q Consensus 569 ~~A~e~a~~lL~iD~iI~~~ 588 (601)
++|+|+|++|||||+||+.+
T Consensus 499 ~~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 499 TLATETVRSILKIDDVVNTR 518 (518)
T ss_pred HHHHHHHHHHHhhcceEecC
Confidence 99999999999999998763
No 20
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=1.5e-97 Score=831.69 Aligned_cols=468 Identities=23% Similarity=0.327 Sum_probs=423.6
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhh
Q 007488 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (601)
Q Consensus 63 ~k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~ 142 (601)
.++..|| .++|..|+.||+.|+++|++||||+||||||+++.|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 37 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 110 (562)
T 3p9d_E 37 NKKRQHG--LEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEI----AKLLVQLSKS 110 (562)
T ss_dssp CCSCSHH--HHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHH
T ss_pred cceecch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHH----HHHHHHHHHH
Confidence 3788899 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred cccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccCc-------HHHHHHHHhhcCC
Q 007488 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-------SELADVAAVSAGN 215 (601)
Q Consensus 143 qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-------~~L~~va~ts~~~ 215 (601)
||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++. ++|.++|+||+++
T Consensus 111 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~s 190 (562)
T 3p9d_E 111 QDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGS 190 (562)
T ss_dssp HHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSS
T ss_pred HHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999999998864 2699999998764
Q ss_pred ------hhHHHHHHHHHHHhhccC-------CceEE--ecCCcccceeeeeeeeEEeecccCCccccCcccCeeEeecee
Q 007488 216 ------NYEVGNMIAEAMSKVGRK-------GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCK 280 (601)
Q Consensus 216 ------~~~ls~li~eAi~~vg~~-------g~I~i--~~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~k 280 (601)
.++|+++++||+..+.+. +.|++ .+|++++|| ++++||+|+++|.||||+++.. .+..+++|+
T Consensus 191 K~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m~~~~~-~~~~~~~~k 268 (562)
T 3p9d_E 191 KIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQMPKCVL-PKEGSDGVK 268 (562)
T ss_dssp STTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESSEEESSCCCTTSCCC------TTCSSCE
T ss_pred chhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeeeEEEecCCCCCCcCcccc-cccccccce
Confidence 578999999999998652 23444 579999999 9999999999999999876431 122247889
Q ss_pred Eeeeccc-------------CCCHHH-----------HHHHHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEE
Q 007488 281 LLLVDKK-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAA 336 (601)
Q Consensus 281 Ill~d~~-------------i~~~~~-----------l~~~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~a 336 (601)
|++++++ |+++++ +.++++++.+.|+||||++++|+++++++|..|++ .+
T Consensus 269 Iall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I------~~ 342 (562)
T 3p9d_E 269 LAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDL------PA 342 (562)
T ss_dssp ECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTC------CC
T ss_pred EEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCC------EE
Confidence 9888865 455555 56889999999999999999999999999998854 55
Q ss_pred eecCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEEE-----ecCeEEEEcCCCChhhHHHHHHHHH
Q 007488 337 LKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL-----TKDTTTIVGDGSTQDAVSKRVAQIR 411 (601)
Q Consensus 337 Vk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i-----~~~~~~~i~~~~~~~~i~~r~~~l~ 411 (601)
|++ +++.+|+|||++|||++++ +++++++++||+|++|++ +++++++|++|+++
T Consensus 343 v~~-----v~k~~le~ia~~TGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~----------- 401 (562)
T 3p9d_E 343 VRW-----VGGQELEHIAISTNGRIVP-----RFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKET----------- 401 (562)
T ss_dssp EEC-----CCTTTHHHHHHHHCCCEEE-----SSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCC-----------
T ss_pred Eec-----cCHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCC-----------
Confidence 554 4588999999999999999 689999999999999987 36899999999764
Q ss_pred HHHHhhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHH
Q 007488 412 TLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAI 490 (601)
Q Consensus 412 ~~l~~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~ 490 (601)
..|||+|||+|+.+++|+||++|||+|++|+++++| +|||||++|++|+.+|+++
T Consensus 402 ------------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~ 457 (562)
T 3p9d_E 402 ------------------------KTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEE 457 (562)
T ss_dssp ------------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHH
T ss_pred ------------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999 9999999999999999999
Q ss_pred hhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc----CCCeeeEecCCCcccchhhcccccchHHHHH
Q 007488 491 KETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS----DNHKYGYNAATGNYEDLMAAGIIDPTKVVRC 566 (601)
Q Consensus 491 ~~~~~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~----~~~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~ 566 (601)
+.++++.+| +++++|++||+.||++||+|||+|+.+++.+|+.. +++++|||+.+|+|.||++.|||||+.||++
T Consensus 458 ~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~ 536 (562)
T 3p9d_E 458 ADKQRGIDQ-YAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQ 536 (562)
T ss_dssp HHTTCTTHH-HHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHH
T ss_pred hccCccHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhccCEEcHHHHHH
Confidence 988878776 79999999999999999999999999999999864 3578999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHchhHHHhCCCC
Q 007488 567 CLEHASSVAKTFLMSDCVVVEIKE 590 (601)
Q Consensus 567 ~L~~A~e~a~~lL~iD~iI~~~~~ 590 (601)
+|++|+|+|++|||||++|...+.
T Consensus 537 al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 537 QILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp HHHHHHHHHHHHHTEEEEEECCC-
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999987653
No 21
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3e-96 Score=814.52 Aligned_cols=453 Identities=20% Similarity=0.306 Sum_probs=417.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 007488 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (601)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~qd~~~GDGT 151 (601)
.++|..|+.||+.|+++|+|||||+||||||+++.|+|+|||||+|||++|+++||+ |+||+++|++||+++||||
T Consensus 8 ~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGT 83 (515)
T 3iyg_G 8 RKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPA----AKSMIEISRTQDEEVGDGT 83 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 679999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccCc--H-HHHHHHHhhcCC------hhHHHHH
Q 007488 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAGN------NYEVGNM 222 (601)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~L~~va~ts~~~------~~~ls~l 222 (601)
||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++. . +|.++|+||++. .++++++
T Consensus 84 TtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i 163 (515)
T 3iyg_G 84 TSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNI 163 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999875 3 899999998753 4678899
Q ss_pred HHHHHHhhccC--C--------ceEE--ecCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEeeecc----
Q 007488 223 IAEAMSKVGRK--G--------VVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDK---- 286 (601)
Q Consensus 223 i~eAi~~vg~~--g--------~I~i--~~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~d~---- 286 (601)
+++|+..+.++ + .|++ .+|++++|+ ++++||+|+++|.||. |+++++||||+++|+
T Consensus 164 ~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~~Le~ 235 (515)
T 3iyg_G 164 ALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEY 235 (515)
T ss_pred HHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeEEEeCCCCCCC-------CcceeeeeEEEEEcccccc
Confidence 99999988632 2 1333 589999999 9999999999999985 667899999999998
Q ss_pred ---------cCCCHHHHHHHHH-----------HHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEeecCCcCCcc
Q 007488 287 ---------KITNARDLINVLE-----------DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERK 346 (601)
Q Consensus 287 ---------~i~~~~~l~~~le-----------~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk~~~~g~~~ 346 (601)
.|++++++.++++ ++.+.|++|||++++|++.++++|..+ +|+|| ++++
T Consensus 236 ~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~------~I~av-----~~~~ 304 (515)
T 3iyg_G 236 KKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRA------NITAI-----RRVR 304 (515)
T ss_pred cccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHC------Cceee-----ccCC
Confidence 4788888887776 889999999999999999999999864 45665 5888
Q ss_pred hhHHHHHHHHhCCeEeeccCCccccCCCCCCcee-eeEEEE---ecCeEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHH
Q 007488 347 SQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYE 422 (601)
Q Consensus 347 ~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~-~~~v~i---~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~~~~ 422 (601)
+.+|+|||++|||++++ +++++++++||+ |+.|++ ++++++||++|+++
T Consensus 305 k~~leria~~tGa~ii~-----~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~---------------------- 357 (515)
T 3iyg_G 305 KTDNNRIARACGARIVS-----RPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDP---------------------- 357 (515)
T ss_pred HHHHHHHHHHhCCeeec-----cccccChhhcCCcccEEEEEEECCceEEEEeCCCCC----------------------
Confidence 99999999999999999 689999999999 999985 46789999999764
Q ss_pred HHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHhhcCChhhHHH
Q 007488 423 REKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKV 501 (601)
Q Consensus 423 ~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~ 501 (601)
..|||+|||+|+.+++|+||++|||++++|++++++ +|||||++|++++.+|++++.++++.+| +
T Consensus 358 -------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq-~ 423 (515)
T 3iyg_G 358 -------------KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQ-W 423 (515)
T ss_pred -------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHH-H
Confidence 479999999999999999999999999999999765 9999999999999999999988888877 7
Q ss_pred HHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC----CCeeeEecCCCcccchhhcccccchHHHHHHHHHHHHHHHH
Q 007488 502 GADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD----NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKT 577 (601)
Q Consensus 502 ~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~----~~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~~A~e~a~~ 577 (601)
++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|++.||++.|||||+.||+++|++|+|+|++
T Consensus 424 ~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~ 503 (515)
T 3iyg_G 424 PYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVL 503 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998754 45799999999999999999999999999999999999999
Q ss_pred HHchhHHHhCC
Q 007488 578 FLMSDCVVVEI 588 (601)
Q Consensus 578 lL~iD~iI~~~ 588 (601)
|||||++|...
T Consensus 504 iL~iD~ii~~~ 514 (515)
T 3iyg_G 504 LLRIDDIVSGH 514 (515)
T ss_pred HHHHHheeecC
Confidence 99999999754
No 22
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.5e-96 Score=815.15 Aligned_cols=451 Identities=20% Similarity=0.290 Sum_probs=411.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 007488 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (601)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~qd~~~GDGT 151 (601)
+++|..|+.||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (512)
T 3iyg_Q 10 EEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPA----AKMIVMASHMQEQEVGDGT 85 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 579999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhc----ccccCcH-HHHHHHHhhcCC-----hhHHHH
Q 007488 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQM----SKEVEDS-ELADVAAVSAGN-----NYEVGN 221 (601)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~----s~~v~~~-~L~~va~ts~~~-----~~~ls~ 221 (601)
||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++ ++++++. +|.++|+||+++ +++|++
T Consensus 86 TtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~ 165 (512)
T 3iyg_Q 86 NFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAK 165 (512)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHH
Confidence 999999999999999999999999999999999999999999998 5667666 899999999876 789999
Q ss_pred HHHHHHHhhccC-CceEE-------ecCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEeeeccc------
Q 007488 222 MIAEAMSKVGRK-GVVTL-------EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (601)
Q Consensus 222 li~eAi~~vg~~-g~I~i-------~~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~d~~------ 287 (601)
|+++|+.+++++ +.|.+ ..|+++.|+ ++++||+|+++|.+ | +..++||+|++++++
T Consensus 166 livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~--~-------~~~~~n~kI~ll~~~le~~~~ 235 (512)
T 3iyg_Q 166 LIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG--D-------VTSVKDAKIAVYSCPFDGMIT 235 (512)
T ss_pred HHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC--C-------CcccccCceEEEecccccccc
Confidence 999999999986 44433 469999888 99999999999865 3 345778888888765
Q ss_pred -------CCCHHHHHHH-------HH----HHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEeecCCcCCcchhH
Q 007488 288 -------ITNARDLINV-------LE----DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (601)
Q Consensus 288 -------i~~~~~l~~~-------le----~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk~~~~g~~~~~~ 349 (601)
|++++++.++ ++ ++.+.|+||||++++|++.++++|..+ +|+||++|+ +.+
T Consensus 236 e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~------~I~av~~~~-----~~d 304 (512)
T 3iyg_Q 236 ETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKY------NIMLVRLNS-----KWD 304 (512)
T ss_pred cccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC------CeEEEEeCC-----HHH
Confidence 5677777665 44 888999999999999999998877643 789999887 456
Q ss_pred HHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEEE---ecCeEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHH
Q 007488 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (601)
Q Consensus 350 L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~~~~~~~l 426 (601)
|+|||++|||++++ +++++++++||+|++|++ +++++++|++|+.
T Consensus 305 le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~--------------------------- 352 (512)
T 3iyg_Q 305 LRRLCKTVGATALP-----RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE--------------------------- 352 (512)
T ss_pred HHHHHHHhCCEEec-----ccccCCHHHCCcccEEEEEEeCCeEEEEEEcccC---------------------------
Confidence 99999999999999 689999999999999986 4668899988742
Q ss_pred HHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHhhcCChhhHHHHHHH
Q 007488 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (601)
Q Consensus 427 ~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~~~~ 505 (601)
++++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.++++.+| +++++
T Consensus 353 -------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~ 424 (512)
T 3iyg_Q 353 -------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQ-YAIKK 424 (512)
T ss_pred -------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHH-HHHHH
Confidence 35799999999999999999999999999999999999 9999999999999999999988878776 89999
Q ss_pred HHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCeeeEecCCC--cccchhhcccccchHHHHHHHHHHHHHHHHHHc
Q 007488 506 VKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATG--NYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLM 580 (601)
Q Consensus 506 ~a~AL~~ip~~La~NaG~d~~~vi~kL~~~---~~~~~Gid~~~g--~i~d~~e~gI~Dp~~vk~~~L~~A~e~a~~lL~ 580 (601)
|++||+.||++||+|||+|+.+++.+|+.. +++++|||+.+| +|.||++.|||||+.||+++|++|+|+|++|||
T Consensus 425 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~ 504 (512)
T 3iyg_Q 425 FAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLR 504 (512)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999875 357899999965 999999999999999999999999999999999
Q ss_pred hhHHHhC
Q 007488 581 SDCVVVE 587 (601)
Q Consensus 581 iD~iI~~ 587 (601)
+|++|..
T Consensus 505 id~ii~~ 511 (512)
T 3iyg_Q 505 VDQIIMA 511 (512)
T ss_pred HhHheec
Confidence 9999975
No 23
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.1e-95 Score=806.21 Aligned_cols=455 Identities=23% Similarity=0.354 Sum_probs=410.3
Q ss_pred cccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhhccc
Q 007488 66 LHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTND 145 (601)
Q Consensus 66 i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~qd~ 145 (601)
+..| .+++..|+.+|..|+++|++||||+||||||+++.|+|+|||||+|||++|+++||+ |+|++++|++||+
T Consensus 5 ~~~~--~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~----akll~~~a~~qd~ 78 (517)
T 3iyg_Z 5 VARA--QAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPT----ASLIAKVATAQDD 78 (517)
T ss_pred hhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHH
Confidence 4456 789999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred ccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccC-cH-HHHHHHHhhcCC------hh
Q 007488 146 LAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DS-ELADVAAVSAGN------NY 217 (601)
Q Consensus 146 ~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~-~~-~L~~va~ts~~~------~~ 217 (601)
++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||+++ .+
T Consensus 79 e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d 158 (517)
T 3iyg_Z 79 ITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELAD 158 (517)
T ss_pred HhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999987 55 899999999764 47
Q ss_pred HHHHHHHHHHHhhccCC------c--eEEecCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEeeecccC-
Q 007488 218 EVGNMIAEAMSKVGRKG------V--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI- 288 (601)
Q Consensus 218 ~ls~li~eAi~~vg~~g------~--I~i~~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~d~~i- 288 (601)
.|+++++||+..+.+.+ . |...+|++.+|+ ++++||+|+++|.||+ |+++++||+|+++|+++
T Consensus 159 ~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le 230 (517)
T 3iyg_Z 159 VLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLE 230 (517)
T ss_pred HHHHHHHHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEeccCCCCC-------ccccccCCeEEEeccccc
Confidence 89999999999886532 1 333689999999 9999999999999987 66789999999999875
Q ss_pred ------------CCHHHHH-----------HHHHHHHhcCC--------CE-EEEcccccHHHHHHHHHhhhcccceEEE
Q 007488 289 ------------TNARDLI-----------NVLEDAIRGAY--------PI-LIIAEDIEQEALATLVVNKLRGALKIAA 336 (601)
Q Consensus 289 ------------~~~~~l~-----------~~le~~~~~~~--------~l-vI~a~~I~~~aL~~L~~nk~~g~~~i~a 336 (601)
++++++. +.++++...+. |+ ||++++|+++++++|..+ +|++
T Consensus 231 ~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~------gI~~ 304 (517)
T 3iyg_Z 231 YEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKE------GIIA 304 (517)
T ss_pred ccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHC------CCEE
Confidence 3444432 34555554444 33 566799999999999876 4567
Q ss_pred eecCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCC-ceeeeEE---EEecCeEEEEcCCCChhhHHHHHHHHHH
Q 007488 337 LKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEV-LGNASKV---VLTKDTTTIVGDGSTQDAVSKRVAQIRT 412 (601)
Q Consensus 337 Vk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~-lG~~~~v---~i~~~~~~~i~~~~~~~~i~~r~~~l~~ 412 (601)
|+ ++++.+|+|||++|||++++ +++++++++ ||+|+ | +++++++++|++|+++
T Consensus 305 v~-----~v~~~~leria~~tGa~iv~-----~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~------------ 361 (517)
T 3iyg_Z 305 LR-----RAKRRNMERLTLACGGIALN-----SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNP------------ 361 (517)
T ss_pred EE-----ecCHHHHHHHHHHhCCEEec-----chhhCcccccCCcce-EEEEEEcCceEEEEeCCCCc------------
Confidence 76 45688999999999999999 789999999 99999 9 5688999999999764
Q ss_pred HHHhhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHh
Q 007488 413 LIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIK 491 (601)
Q Consensus 413 ~l~~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~ 491 (601)
..|||+|||+|+.+++|+||++|||+|++|+++++| +|||||++|++++.+|++++
T Consensus 362 -----------------------~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~ 418 (517)
T 3iyg_Z 362 -----------------------RSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYK 418 (517)
T ss_pred -----------------------hhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHh
Confidence 257999999999999999999999999999999999 99999999999999999999
Q ss_pred hcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCeeeEecCCCcccchhhcccccchHHHHHHH
Q 007488 492 ETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCL 568 (601)
Q Consensus 492 ~~~~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~---~~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L 568 (601)
.++++.+| +++++|++||+.+|++||+|||+|+.+++.+|+..| ++++|||+.+|++.||++.|||||+.||+++|
T Consensus 419 ~~~~g~eq-~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al 497 (517)
T 3iyg_Z 419 PSVKGRAQ-LGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLL 497 (517)
T ss_pred ccCCHHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeecHHHHHHHH
Confidence 87777766 899999999999999999999999999999998764 56899999999999999999999999999999
Q ss_pred HHHHHHHHHHHchhHHHhC
Q 007488 569 EHASSVAKTFLMSDCVVVE 587 (601)
Q Consensus 569 ~~A~e~a~~lL~iD~iI~~ 587 (601)
++|+|+|++||+||++|..
T Consensus 498 ~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 498 HSCTVIATNILLVDEIMRA 516 (517)
T ss_pred HHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999864
No 24
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=1.6e-96 Score=824.26 Aligned_cols=461 Identities=21% Similarity=0.283 Sum_probs=407.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhhcccccCCcc
Q 007488 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (601)
Q Consensus 72 ~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~qd~~~GDGT 151 (601)
+++|..|+.||+.|+++|+|||||+||||||+++.|+|+|||||+|||++|+++||+ |+||+++|++||+++||||
T Consensus 25 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~qd~e~GDGT 100 (568)
T 3p9d_H 25 DGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPA----VKVLVMATEQQKIDMGDGT 100 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHH----HHHHHHHHHHHHTTSSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHhhhceeCCCc
Confidence 579999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhccccc----CcH-HHHHHHHhhcC-----ChhHHHH
Q 007488 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEV----EDS-ELADVAAVSAG-----NNYEVGN 221 (601)
Q Consensus 152 Tt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v----~~~-~L~~va~ts~~-----~~~~ls~ 221 (601)
||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++++ ++. +|.++|+||++ ++++|++
T Consensus 101 TtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~ 180 (568)
T 3p9d_H 101 NLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSE 180 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHH
T ss_pred eehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHH
Confidence 9999999999999999999999999999999999999999999999876 344 89999999863 4689999
Q ss_pred HHHHHHHhhccC-----C-------ceEE--ecCCcccceeeeeeeeEEeecccCCccccCcccCeeEee---ceeEeee
Q 007488 222 MIAEAMSKVGRK-----G-------VVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYE---NCKLLLV 284 (601)
Q Consensus 222 li~eAi~~vg~~-----g-------~I~i--~~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~---~~kIll~ 284 (601)
|++||+.+++++ + .|++ .+|++++|| ++++||+|+++|. +|+++++ ||||+++
T Consensus 181 livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~---------~m~~~i~~~~n~kIlll 250 (568)
T 3p9d_H 181 LVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGMVFNREPE---------GHVKSLSEDKKHKVAVF 250 (568)
T ss_dssp HHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSCCBSSCBS---------SGGGSCCCCSSCEEEEE
T ss_pred HHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccEEEeeccc---------CCcEEEecCCcceEEEE
Confidence 999999999874 3 4666 469999999 9999999999873 3667788 9999999
Q ss_pred ccc-------------CCCHHHHHH-----------HHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEeecC
Q 007488 285 DKK-------------ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (601)
Q Consensus 285 d~~-------------i~~~~~l~~-----------~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk~~ 340 (601)
+++ |++++++.+ +++++.+.|+||||++++|+++++++|..+ +|+||++|
T Consensus 251 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~av~~v 324 (568)
T 3p9d_H 251 TCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRY------GILVLKVP 324 (568)
T ss_dssp CSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHH------TCEEECCC
T ss_pred ccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHC------CeEEEecC
Confidence 987 677877654 688999999999999999999999999887 57999977
Q ss_pred CcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEEE---ecCeEEEEcCCCChhhHHHHHHHHHHHHHhh
Q 007488 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (601)
Q Consensus 341 ~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~ 417 (601)
+ +.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|+.
T Consensus 325 ~-----~~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------------ 376 (568)
T 3p9d_H 325 S-----KFELRRLCRVCGATPLP-----RLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQG------------------ 376 (568)
T ss_dssp C-----HHHHHHHHHHHSCCCCS-----SSSCCCGGGCEECSCCCCCEETTEECBCCCCCSS------------------
T ss_pred C-----HHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEecCceEEEEecCCC------------------
Confidence 5 78899999999999999 689999999999999974 4689999999862
Q ss_pred hhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHh--cC-ccccccHHHHHHHHHHHHHhhcC
Q 007488 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVE--EG-IVVGGGCTLLRLSSKVDAIKETL 494 (601)
Q Consensus 418 ~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~--~g-vvpGGGa~e~~ls~~L~~~~~~~ 494 (601)
|++++|||+|||+|+.+++|+||++|||+|++|++++ ++ +|||||++|++|+.+|++++.++
T Consensus 377 ---------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~ 441 (568)
T 3p9d_H 377 ---------------EISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERT 441 (568)
T ss_dssp ---------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTC
T ss_pred ---------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccC
Confidence 2357899999999999999999999999999999999 65 99999999999999999999888
Q ss_pred ChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC-----------CCeeeEecCCCc---ccchhhcccccc
Q 007488 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD-----------NHKYGYNAATGN---YEDLMAAGIIDP 560 (601)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~~-----------~~~~Gid~~~g~---i~d~~e~gI~Dp 560 (601)
++.+| +++++|++||+.||++||+|||+|+.+++.+|+..| ++++|||+.+|+ |.||++.|||||
T Consensus 442 ~g~eq-~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp 520 (568)
T 3p9d_H 442 PGLLQ-LAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDM 520 (568)
T ss_dssp CSTHH-HHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHH
T ss_pred CcHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEEc
Confidence 88777 799999999999999999999999999999999764 347999999997 999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHchhHHHhCCCCCCCCCC
Q 007488 561 TKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 596 (601)
Q Consensus 561 ~~vk~~~L~~A~e~a~~lL~iD~iI~~~~~~~~~~~ 596 (601)
+.||+++|++|+|+|++|||||++|..+|...|++|
T Consensus 521 ~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~~ 556 (568)
T 3p9d_H 521 LATKKFAINVATEAATTVLSIDQIIMAKKAGGPRAP 556 (568)
T ss_dssp HHHHHHHHHCCEECBCCC------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHhhccccCCCCCC
Confidence 999999999999999999999999999988655444
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=2.8e-95 Score=811.88 Aligned_cols=464 Identities=23% Similarity=0.328 Sum_probs=412.7
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhhc
Q 007488 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (601)
Q Consensus 64 k~i~f~~~~~~~~~~~~~v~~la~~v~sTlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~q 143 (601)
.+...| .+++..|+.+|..|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |+|++++|++|
T Consensus 10 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~q 83 (546)
T 3p9d_F 10 AESLRR--DAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPT----AVLIARAAAAQ 83 (546)
T ss_dssp EEEEEH--HHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHH----HHHHHHHHHHH
T ss_pred cchhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHH
Confidence 345566 889999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhcccccC----cH-HHHHHHHhhcCC---
Q 007488 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE----DS-ELADVAAVSAGN--- 215 (601)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~----~~-~L~~va~ts~~~--- 215 (601)
|+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||+++
T Consensus 84 d~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~ 163 (546)
T 3p9d_F 84 DEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVD 163 (546)
T ss_dssp HHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTH
T ss_pred HHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999985 33 899999999874
Q ss_pred ---hhHHHHHHHHHHHhhccC-------CceEE--ecCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEee
Q 007488 216 ---NYEVGNMIAEAMSKVGRK-------GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (601)
Q Consensus 216 ---~~~ls~li~eAi~~vg~~-------g~I~i--~~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll 283 (601)
.+.|++++++|+..+.+. ..|.+ .+|++.+|| ++++||+|+++|.||+ |+++++||+|++
T Consensus 164 ~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~en~kIll 235 (546)
T 3p9d_F 164 ADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD-------MPTRVKNAYVLI 235 (546)
T ss_dssp HHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEESCCCCSSS-------SCSSBCSCCCCE
T ss_pred hhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEEeccccccc-------CcceecCceEEE
Confidence 478999999999998631 12443 589999999 9999999999999985 677899999999
Q ss_pred ecccCC-------------CHHHH-----------HHHHHHHHh---------cCCC-EEEEcccccHHHHHHHHHhhhc
Q 007488 284 VDKKIT-------------NARDL-----------INVLEDAIR---------GAYP-ILIIAEDIEQEALATLVVNKLR 329 (601)
Q Consensus 284 ~d~~i~-------------~~~~l-----------~~~le~~~~---------~~~~-lvI~a~~I~~~aL~~L~~nk~~ 329 (601)
+|++++ +++++ .+.++.+.. .|.| |||++++|+++++++|..|+
T Consensus 236 ~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~g-- 313 (546)
T 3p9d_F 236 LNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHN-- 313 (546)
T ss_dssp ECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTT--
T ss_pred ecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCC--
Confidence 998753 22222 234555544 3454 67777899999999999884
Q ss_pred ccceEEEeecCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEE---EEecCeEEEEcCCCChhhHHHH
Q 007488 330 GALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKV---VLTKDTTTIVGDGSTQDAVSKR 406 (601)
Q Consensus 330 g~~~i~aVk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v---~i~~~~~~~i~~~~~~~~i~~r 406 (601)
|++|+ ++++.+|+|||++|||++++ +++++++++||+|++| .+++++++||++|+++
T Consensus 314 ----I~~vr-----~v~~~~leria~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------ 373 (546)
T 3p9d_F 314 ----ILALR-----RAKRRNMERLQLVTGGEAQN-----SVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDP------ 373 (546)
T ss_dssp ----CEEEC-----CCCHHHHHHHHHTTTBCCCC-----CCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCC------
T ss_pred ----CeeEe-----cCCHHHHHHHHHHhCCEEec-----chhhCCHhHCCcccEEEEEEecCceEEEEecCCCC------
Confidence 47776 45688999999999999999 6899999999999999 4678999999999864
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHHHHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHH
Q 007488 407 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSS 485 (601)
Q Consensus 407 ~~~l~~~l~~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~ 485 (601)
..|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++++.
T Consensus 374 -----------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~ 424 (546)
T 3p9d_F 374 -----------------------------KSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSR 424 (546)
T ss_dssp -----------------------------SCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHH
T ss_pred -----------------------------ceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHH
Confidence 478999999999999999999999999999999999 99999999999999
Q ss_pred HHHH---HhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc--------CCCeeeEecCCCcccchhh
Q 007488 486 KVDA---IKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS--------DNHKYGYNAATGNYEDLMA 554 (601)
Q Consensus 486 ~L~~---~~~~~~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~kL~~~--------~~~~~Gid~~~g~i~d~~e 554 (601)
+|++ ++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|+.. .++++|||+.+|+|.||++
T Consensus 425 ~L~~~~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~ 503 (546)
T 3p9d_F 425 YLRSANMNKLGAKGKTK-TGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTI 503 (546)
T ss_dssp HHHHHHTTTTTTTSHHH-HHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGG
T ss_pred HHHhhhhhhhcCchHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHh
Confidence 9999 5777777766 89999999999999999999999999999999864 3457999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHchhHHHhCCCCCCC
Q 007488 555 AGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEP 593 (601)
Q Consensus 555 ~gI~Dp~~vk~~~L~~A~e~a~~lL~iD~iI~~~~~~~~ 593 (601)
.|||||+.||+++|++|+|+|++||+||++|...+....
T Consensus 504 ~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~~~~ 542 (546)
T 3p9d_F 504 EGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRSTLK 542 (546)
T ss_dssp GTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCSSCC
T ss_pred ccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC
Confidence 999999999999999999999999999999988766543
No 26
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=4.1e-90 Score=762.81 Aligned_cols=430 Identities=23% Similarity=0.354 Sum_probs=343.0
Q ss_pred EeecCCCCcEEeechHHHhccccccCcccchHHHHHHHHHhhcccccCCcccHHHHHHHHHHHHHHHHHHCCCChHHHHH
Q 007488 101 VLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR 180 (601)
Q Consensus 101 mI~~~~g~~~ITnDG~TIlk~i~l~hP~~~~gakLl~~~a~~qd~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~ 180 (601)
||+++.|+|+|||||+||||+|+++||. |+||+++|++||+++||||||+||||++||+++.+++++|+||+.|++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPA----AKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHH----HHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 6888899999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCc--H-HHHHHHHhhc------CChhHHHHHHHHHHHhhccC--Cc--------eEEe--
Q 007488 181 GIEKTSKALVSELKQMSKEVED--S-ELADVAAVSA------GNNYEVGNMIAEAMSKVGRK--GV--------VTLE-- 239 (601)
Q Consensus 181 g~~~a~~~~~~~L~~~s~~v~~--~-~L~~va~ts~------~~~~~ls~li~eAi~~vg~~--g~--------I~i~-- 239 (601)
||++|++.++++|+++++|++. . +|.++|+||+ +++++|++|+++|+.+++++ |. |+++
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 9999999999999999999874 4 8999999874 46899999999999999876 53 5664
Q ss_pred cCCcccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEeeeccc-------------CCCHHHH-----------H
Q 007488 240 EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDL-----------I 295 (601)
Q Consensus 240 ~G~~~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~d~~-------------i~~~~~l-----------~ 295 (601)
+|++++|+ ++++||+|+++|.||+| +++++||||+++|++ |++++++ .
T Consensus 157 ~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~ 228 (500)
T 3aq1_B 157 AGGSIDDS-ELIDGLVIDKERSHPNM-------PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMR 228 (500)
T ss_dssp ESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEEEESSCBCC-------------------------CHHH
T ss_pred cCCCccce-EEEeeeEEeecCCCCCC-------cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHH
Confidence 89999998 99999999999999986 457999999999998 6777765 7
Q ss_pred HHHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEeecCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCC
Q 007488 296 NVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGK 375 (601)
Q Consensus 296 ~~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~ 375 (601)
++++++.+.|+||||++++|+++|+++|..| +|+||+ ++++++|+|||++|||++++ +++++++
T Consensus 229 ~~le~I~~~g~~lvi~~~~I~~~al~~L~~~------~I~av~-----~~~k~~le~ia~~tGa~iis-----~l~~~~~ 292 (500)
T 3aq1_B 229 EMAEKVIASGANVVFCQKGIDDMAQYYIEKA------GIYAVR-----RVKKSDLKRLSKVTGATIIQ-----DLDQITT 292 (500)
T ss_dssp HHHHHHHTTCCSEEEESSCBCHHHHHHHHHT------TCEEEC-----SCCHHHHHHHHHHHCCCCBS-----CTTCCCS
T ss_pred HHHHHHHHhCcCEEEECCCcCHHHHHHHHHC------CEEEEE-----eCCHHHHHHHHHHhCCeEec-----ccccCCH
Confidence 8999999999999999999999999999987 457775 78899999999999999998 6899999
Q ss_pred CCceeeeEEEEe---cCeEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEEccCChhHHHH
Q 007488 376 EVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKE 452 (601)
Q Consensus 376 ~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~~l~E 452 (601)
++||+|++|++. ++++++|++|++ +++|||+|||+|+.+++|
T Consensus 293 ~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~TI~lrG~t~~~l~E 337 (500)
T 3aq1_B 293 EDVGTAGLVEEKEVRGGKMTYVTGCQN-----------------------------------SKAVTVLLHGGTEHVVDS 337 (500)
T ss_dssp TTCEEEEEEEEEECSSSEEEEEEEETT-----------------------------------CCCEEEEEEESSHHHHHH
T ss_pred hHCCCceEEEEEEecCeEEEEEECCCC-----------------------------------CceEEEEecCCcHHHHHH
Confidence 999999999874 899999999875 368999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHH
Q 007488 453 KKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEK 531 (601)
Q Consensus 453 ~~r~i~DAl~a~k~a~~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~ip~~La~NaG~d~~~vi~k 531 (601)
+||+++||+|++|+++++| +|||||++|++|+.+|++++.++++.+| +++++|++||+.||++||+|||+|+.+++.+
T Consensus 338 ~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~ 416 (500)
T 3aq1_B 338 LDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQ-LAVSKFAEALEVIPVALAENAGLDPIDIMVE 416 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHH-HHHHHHHHHTTHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 9999999999999999999 9999999999999999999988777766 8999999999999999999999999999999
Q ss_pred HHhcC---CCeeeEecCCCcccchhhcccccchHHHHHHHHHHHHHHHHHHchhHHHhCCCCCCCC
Q 007488 532 VLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 594 (601)
Q Consensus 532 L~~~~---~~~~Gid~~~g~i~d~~e~gI~Dp~~vk~~~L~~A~e~a~~lL~iD~iI~~~~~~~~~ 594 (601)
|+..| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++||++|++|...|++.|+
T Consensus 417 l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~ 482 (500)
T 3aq1_B 417 LRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASKGSANQG 482 (500)
T ss_dssp HHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-------------
T ss_pred HHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCC
Confidence 98643 3589999999999999999999999999999999999999999999999998876543
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.8e-48 Score=368.75 Aligned_cols=193 Identities=48% Similarity=0.801 Sum_probs=189.7
Q ss_pred eeeeeeeEEeecccCCccccCcccCeeEeeceeEeeecccCCCHHHHHHHHHHHHhcCCCEEEEcccccHHHHHHHHHhh
Q 007488 248 LYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNK 327 (601)
Q Consensus 248 ~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk 327 (601)
+++++||.|||||+||||++++++|.++++||+||++|++|+++++++|+||++.+.+.||+|++++|++|||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceEEEeecCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEEEecCeEEEEcCCCChhhHHHHH
Q 007488 328 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRV 407 (601)
Q Consensus 328 ~~g~~~i~aVk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~i~~~~~~~~i~~r~ 407 (601)
++|.++|+|||+|+|||.|+..|+|||.+|||+++++++|+++++++.++||+|++|++++++|+++.|.++++.|++||
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEE
Q 007488 408 AQIRTLIENAEQDYEREKLNERIAKLSGGVAVI 440 (601)
Q Consensus 408 ~~l~~~l~~~~~~~~~~~l~er~a~l~~~~~tI 440 (601)
+||+.+++.++++|++|+|+||+|||+|++++|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999998864
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=4.7e-47 Score=359.71 Aligned_cols=189 Identities=57% Similarity=0.892 Sum_probs=185.7
Q ss_pred eeeeEEeecccCCccccCcccCeeEeeceeEeeecccCCCHHHHHHHHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcc
Q 007488 251 VEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRG 330 (601)
Q Consensus 251 v~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g 330 (601)
-+||.|||||+||||++++++|.++++||+||++|++|+++++++|+||.+.+.+.||+|++++|++|||++|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEeecCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEEEecCeEEEEcCCCChhhHHHHHHHH
Q 007488 331 ALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQI 410 (601)
Q Consensus 331 ~~~i~aVk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~i~~~~~~~~i~~r~~~l 410 (601)
.++|+|||+|+|||.|+..|+|||++|||+++++++|+++++++.++||+|++|++++++|+++.|.++++.|++||+||
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhhcCCeEE
Q 007488 411 RTLIENAEQDYEREKLNERIAKLSGGVAV 439 (601)
Q Consensus 411 ~~~l~~~~~~~~~~~l~er~a~l~~~~~t 439 (601)
+.+++.++++|++|+|+||+|||+|++++
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 99999999999999999999999999873
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=3.4e-36 Score=272.53 Aligned_cols=144 Identities=56% Similarity=0.922 Sum_probs=142.0
Q ss_pred eeEEeecccCCccccCcccCeeEeeceeEeeecccCCCHHHHHHHHHHHHhcCCCEEEEcccccHHHHHHHHHhhhcccc
Q 007488 253 GMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGAL 332 (601)
Q Consensus 253 G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~ 332 (601)
||.|||||+||||++++++|.++++||+||++|++|+++++++|+||++.+.+.||+|++++|++|||++|+.||+||.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEEEecCeEEEEcC
Q 007488 333 KIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGD 396 (601)
Q Consensus 333 ~i~aVk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~i~~ 396 (601)
+|+|||+|+|||.|++.|+|||.+|||+++++++|+++++++.++||+|++|++++++|+++.|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999975
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.85 E-value=4.7e-21 Score=183.75 Aligned_cols=146 Identities=18% Similarity=0.287 Sum_probs=119.3
Q ss_pred ccceeeeeeeeEEeecccCCccccCcccCeeEeeceeEeeecccC-------------CCHHH-----------HHHHHH
Q 007488 244 AENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI-------------TNARD-----------LINVLE 299 (601)
Q Consensus 244 ~~ds~~lv~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~d~~i-------------~~~~~-----------l~~~le 299 (601)
++|| ++++|++|++++.+|. ||+.++||||+++++++ +++++ +.+.++
T Consensus 1 ~~dS-~lv~Gvvl~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~ 72 (178)
T 1gml_A 1 MEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCE 72 (178)
T ss_dssp --CC-SEEEEEEESCCCSSTT-------SCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEEEeccccCCC-------CCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 4688 8999999999988763 67789999999999874 33332 345688
Q ss_pred HHHhcCCCEEEEcccccHHHHHHHHHhhhcccceEEEeecCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCce
Q 007488 300 DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLG 379 (601)
Q Consensus 300 ~~~~~~~~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG 379 (601)
++.+.|+++||++++|++.|+++|..+ +|+||+ ++++.+|++||++|||++++ ++++++++.||
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~k~------gI~~vr-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG 136 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLMRA------NVTAIR-----RVRKTDNNRIARACGARIVS-----RPEELREDDVG 136 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHHHT------TCEEEC-----CCCHHHHHHHHHHHCCCEES-----CGGGCCGGGSB
T ss_pred HHhhcCCcEEEECCcccHHHHHHHHHC------CCEEEe-----cCCHHHHHHHHHHhCCeEeC-----ChhhCChhhhC
Confidence 999999999999999999999999887 457776 66799999999999999999 78999999999
Q ss_pred e-eeEEE---EecCeEEEEcCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEEccCChh
Q 007488 380 N-ASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTET 448 (601)
Q Consensus 380 ~-~~~v~---i~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~~~~~~~l~er~a~l~~~~~tI~vrG~t~~ 448 (601)
+ |+.|+ ++++++++|++|+++ ..|||+|||++..
T Consensus 137 ~~~~~v~~~~ig~~~~~~~~gc~~~-----------------------------------~~~TIllRG~~~~ 174 (178)
T 1gml_A 137 TGAGLLEIKKIGDEYFTFITDCKDP-----------------------------------KACTILLRGASHH 174 (178)
T ss_dssp CCEEEEEEEEETTEEEEEEEEESST-----------------------------------TSCEEEEEC----
T ss_pred CcccEEEEEEECCeEEEEEECCCCC-----------------------------------CEEEEEEECCCcc
Confidence 9 99997 468899999998764 4789999999864
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.74 E-value=1.6e-17 Score=156.18 Aligned_cols=126 Identities=21% Similarity=0.350 Sum_probs=108.2
Q ss_pred eeeeEEeecccCCccccCcccCeeEeeceeEeeecccC-------------CCHHHH-----------HHHHHHHHhcCC
Q 007488 251 VEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI-------------TNARDL-----------INVLEDAIRGAY 306 (601)
Q Consensus 251 v~G~~~~~~~~~p~f~~~~~~~~~~~~~~kIll~d~~i-------------~~~~~l-----------~~~le~~~~~~~ 306 (601)
++|++|++++.+|. |++.++||||+++++++ ++++++ ...++++.+.|+
T Consensus 1 i~Gvv~~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSK-------MPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTT-------SCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCC-------CCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 57999999988864 67789999999999874 344433 456889999999
Q ss_pred CEEEEcccccHHHHHHHHHhhhcccceEEEeecCCcCCcchhHHHHHHHHhCCeEeeccCCccccCCCCCCceeeeEEE-
Q 007488 307 PILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV- 385 (601)
Q Consensus 307 ~lvI~a~~I~~~aL~~L~~nk~~g~~~i~aVk~~~~g~~~~~~L~~ia~~tG~~ii~~~~~~~l~~~~~~~lG~~~~v~- 385 (601)
++||++++|++.|+++|..+ +|+||+ ++++.+|++||++|||++++ ++++++++.||+|+.|+
T Consensus 74 nVVl~~k~I~d~a~~~l~k~------gI~~v~-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKE------GIYAVR-----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHT------TCEEEC-----SCCHHHHHHHHHHHTCCCBS-----STTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHC------CCEEEc-----cCCHHHHHHHHHHhCCeeeC-----ccccCCcccCccceEEEE
Confidence 99999999999999999887 457776 66799999999999999999 78999999999999997
Q ss_pred --EecCeEEEEcCCCC
Q 007488 386 --LTKDTTTIVGDGST 399 (601)
Q Consensus 386 --i~~~~~~~i~~~~~ 399 (601)
++++++++|++|.+
T Consensus 138 ~~ig~~~~~~~~g~~~ 153 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKN 153 (159)
T ss_dssp EEETTEEEEEEESCC-
T ss_pred EEECCeEEEEEECCCC
Confidence 46889999999976
Done!