Query 007491
Match_columns 601
No_of_seqs 91 out of 93
Neff 3.5
Searched_HMMs 13730
Date Mon Mar 25 03:03:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007491.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007491hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tyeb2 c.62.1.1 (B:107-354) I 99.8 3.4E-18 2.5E-22 164.6 18.5 182 4-201 6-219 (248)
2 d1pt6a_ c.62.1.1 (A:) Integrin 99.1 4.2E-10 3.1E-14 101.0 14.5 136 3-187 1-139 (192)
3 d1n3ya_ c.62.1.1 (A:) Integrin 99.1 8.7E-11 6.4E-15 105.3 9.4 137 3-187 2-140 (189)
4 d1atza_ c.62.1.1 (A:) von Will 99.0 2E-09 1.5E-13 96.9 15.3 147 3-197 2-152 (184)
5 d1shux_ c.62.1.1 (X:) Capillar 99.0 7.4E-10 5.4E-14 98.2 11.1 138 3-189 5-142 (181)
6 d1v7pc_ c.62.1.1 (C:) Integrin 99.0 4.8E-09 3.5E-13 94.2 14.5 134 4-186 2-138 (193)
7 d1mf7a_ c.62.1.1 (A:) Integrin 99.0 1.2E-09 8.8E-14 98.3 10.4 141 3-190 5-146 (194)
8 d1ijba_ c.62.1.1 (A:) von Will 98.9 8.9E-09 6.4E-13 93.7 15.6 149 3-197 13-166 (202)
9 d1q0pa_ c.62.1.1 (A:) Compleme 98.8 9E-09 6.5E-13 92.0 10.2 124 4-140 2-128 (209)
10 d1mjna_ c.62.1.1 (A:) Integrin 98.6 5.7E-08 4.2E-12 86.7 8.8 112 3-139 2-117 (179)
11 d1jeyb2 c.62.1.4 (B:6-241) Ku8 98.4 4.5E-06 3.3E-10 75.0 16.2 145 3-190 2-163 (236)
12 d1jeya2 c.62.1.3 (A:34-253) Ku 97.9 0.00014 1.1E-08 64.6 15.0 144 6-186 5-170 (220)
13 d1pd0a3 c.62.1.2 (A:301-552) S 96.0 0.08 5.8E-06 49.2 15.3 181 6-205 6-223 (252)
14 d1yvra2 c.62.1.5 (A:364-537) 6 95.9 0.018 1.3E-06 49.7 9.5 97 3-136 5-108 (174)
15 d2qtva3 c.62.1.2 (A:120-390) S 94.8 0.14 1E-05 48.0 12.6 119 79-205 118-250 (271)
16 d1j93a_ c.1.22.1 (A:) Uroporph 35.5 30 0.0022 32.3 6.6 80 3-92 196-285 (343)
17 d2ozlb2 c.48.1.2 (B:192-329) E 21.8 41 0.003 27.7 4.3 24 168-191 27-50 (138)
18 d1w85b2 c.48.1.2 (B:193-324) P 20.3 47 0.0034 26.9 4.3 24 168-191 23-46 (132)
No 1
>d1tyeb2 c.62.1.1 (B:107-354) Integrin beta A domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=3.4e-18 Score=164.65 Aligned_cols=182 Identities=9% Similarity=-0.012 Sum_probs=129.3
Q ss_pred ceEEEEEecccccchhHHHHHHHHHHHHHHHhhcccccCccCCCCcceEEEEEeecCCCcccc-----------------
Q 007491 4 KQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSYCAC----------------- 66 (601)
Q Consensus 4 ~DIVFVIDgTAsMGpYi~~LktnYI~PiLEyF~~g~l~e~~~g~~s~eyGLVvYrd~~P~~e~----------------- 66 (601)
.|||||||+|+||++||+.+|+. +..+++.+..- ....|+|++.|+|+..-+..
T Consensus 6 vDl~Fv~D~TgSM~~~i~~vk~~-i~~i~~~l~~~--------~~~~r~g~~~f~D~~~~p~~~~~~~~~~~~p~~~~~~ 76 (248)
T d1tyeb2 6 VDIYYLMDLSYSMKDDLWSIQNL-GTKLATQMRKL--------TSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKT 76 (248)
T ss_dssp EEEEEEEECSGGGGGGHHHHHHH-HHHHHHHHHHH--------CSCEEEEEEEECCCSSTTTSCCCSGGGGTCGGGGGTS
T ss_pred eeEEEEEECCcCHHHHHHHHHHH-HHHHHHHHHhh--------CcCceEEEEEEEecccCccccccchhhccCccccccc
Confidence 69999999999999999999987 68898888641 14689999999998632211
Q ss_pred -------ceeeccCCcCHHHHHHHhcCcccCCCCCchhhHHHHHHHHHhccccCCCCCCCCCCCCCccEEEEeecCCCCC
Q 007491 67 -------LVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNVDGQRHCILVAASNPHP 139 (601)
Q Consensus 67 -------~Vqr~GfTsD~~~FlqwLdsI~FsGGGfspaAVAEGLAeAL~~fd~~~~~~q~~~~~~~qKhCILI~nSPPhp 139 (601)
+-...+||+|+++|.++|+++...||||.+|++.+||..|+.|.+.+. ++ .+..|.+|||+|+|||.
T Consensus 77 ~~~~~f~~~~~~~~t~d~~~f~~~l~~~~~~GggD~pE~~~~Al~~a~~~~~~i~-Wr-----~~a~r~viliTDA~~H~ 150 (248)
T d1tyeb2 77 TCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCDEKIG-WR-----NDASHLLVFTTDAKTHI 150 (248)
T ss_dssp CCCCCCSEEEEEEEESCHHHHHHHHTTCCCCCCSSSSBCHHHHHHHHHHCHHHHT-CC-----TTSEEEEEEEESSCBCC
T ss_pred cccccccceecCCCCCCHHHHHHHHhheecccCCCCcchHHHHHHHHHHHhhhCC-CC-----CCccEEEEEECCCCccc
Confidence 112357899999999999999999999999999999999986532221 11 24678999999999997
Q ss_pred CCCCc----cccccccc---cccchhhhhhcccCCCHHHHHHHhhhcCcEEEEe-CCCcchHHHHHHHHh
Q 007491 140 LPTPV----YRPQMQNL---DQNENNEAQAESRLSDAETVAKSFVQCSVSLSVI-CPKQLPKLTAIYNAA 201 (601)
Q Consensus 140 lP~pV----y~P~~~~~---~~ge~~~~~~~s~laDaEqVAk~faEk~IsLSII-sPRklP~Lk~Lfeka 201 (601)
...-- -.|..... ..+.-.+ ....++..++++++.+.|++|.+.++ ..+....+++|-+.-
T Consensus 151 ~~d~~l~g~~~~~d~~~~~~~~~~~~~-~~~~dyps~~ql~~~l~~~~i~~ifavt~~~~~~Y~~l~~~~ 219 (248)
T d1tyeb2 151 ALDGRLAGIVQPNDGQCHVGSDNHYSA-STTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELI 219 (248)
T ss_dssp TTGGGGGTCCSCCCCCCCBCTTSBBGG-GGTSCCCCHHHHHHHHHHTTEEEEEEECGGGHHHHHHHHHTS
T ss_pred ccccccccccccCCCccccCCCCcccc-cccccCCCHHHHHHHHHHhCcEEEEEECchhhHHHHHHHHhc
Confidence 55300 00000000 0111111 12234446899999999999996544 556577777777654
No 2
>d1pt6a_ c.62.1.1 (A:) Integrin alpha1-beta1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=4.2e-10 Score=100.97 Aligned_cols=136 Identities=15% Similarity=0.284 Sum_probs=97.9
Q ss_pred cceEEEEEecccccchhHHHHHHHHHHHHHHHhhcccccCccCCCCcceEEEEEeecCCCccccceeeccCC--cCHHHH
Q 007491 3 EKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSYCACLVQRSGWT--KDVDIF 80 (601)
Q Consensus 3 ~~DIVFVIDgTAsMGpYi~~LktnYI~PiLEyF~~g~l~e~~~g~~s~eyGLVvYrd~~P~~e~~Vqr~GfT--sD~~~F 80 (601)
|.|||||||++.+|+. |+.+| +++..+++.|.- +...+|+|||.|.+.. ...+.|+ .+...+
T Consensus 1 ~~DivfvlD~S~S~~~-~~~~k-~f~~~~i~~~~i--------~~~~~rv~vv~fs~~~------~~~~~l~~~~~~~~~ 64 (192)
T d1pt6a_ 1 QLDIVIVLDGSNSIYP-WDSVT-AFLNDLLKRMDI--------GPKQTQVGIVQYGENV------THEFNLNKYSSTEEV 64 (192)
T ss_dssp CEEEEEEEECCTTCCC-HHHHH-HHHHHHHTTSCB--------STTSBEEEEEEESSSE------EEEECTTTCSSHHHH
T ss_pred CeEEEEEEECCCCCCC-HHHHH-HHHHHHHHHhcc--------CCCCcEEEEEEEeccE------EEEEeCCcchhhHHH
Confidence 5799999999999997 78776 567888888832 1245799999997654 1123443 477899
Q ss_pred HHHhcCcccCCCCCchhhHHHHHHHHHh-ccccCCCCCCCCCCCCCccEEEEeecCCCCCCCCCccccccccccccchhh
Q 007491 81 LHWLSTIPFAGGGFNDAAIAEGLSEALM-MFSVAPNGSQNQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNE 159 (601)
Q Consensus 81 lqwLdsI~FsGGGfspaAVAEGLAeAL~-~fd~~~~~~q~~~~~~~qKhCILI~nSPPhplP~pVy~P~~~~~~~ge~~~ 159 (601)
+..++++.+.||+... .+.||..|+. +|... .+ .+....|.+|||+|..++.-.
T Consensus 65 ~~~i~~~~~~~g~~~~--~~~al~~~~~~~~~~~-~g----~R~~~~kviillTDG~~~d~~------------------ 119 (192)
T d1pt6a_ 65 LVAAKKIVQRGGRQTM--TALGTDTARKEAFTEA-RG----ARRGVKKVMVIVTDGESHDNH------------------ 119 (192)
T ss_dssp HHHHHTCCCCCCSSCC--HHHHHHHHHHTTTSGG-GT----CCTTCEEEEEEEESSCCSCSH------------------
T ss_pred HHHHhhhhhhhhhccc--hHHHHHHHHHhhhccc-cC----CCCCcceEEEEEecCCCCcch------------------
Confidence 9999999988776432 3557777775 44321 11 123578999999998765310
Q ss_pred hhhcccCCCHHHHHHHhhhcCcEEEEeC
Q 007491 160 AQAESRLSDAETVAKSFVQCSVSLSVIC 187 (601)
Q Consensus 160 ~~~~s~laDaEqVAk~faEk~IsLSIIs 187 (601)
+.+..|+.+.++||.+++|.
T Consensus 120 --------~~~~~a~~lk~~gi~v~~ig 139 (192)
T d1pt6a_ 120 --------RLKKVIQDCEDENIQRFSIA 139 (192)
T ss_dssp --------HHHHHHHHHHHTTEEEEEEE
T ss_pred --------hhHHHHHHHHHCCCeEEEEE
Confidence 35788999999999999994
No 3
>d1n3ya_ c.62.1.1 (A:) Integrin alpha-x beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.11 E-value=8.7e-11 Score=105.26 Aligned_cols=137 Identities=12% Similarity=0.170 Sum_probs=98.8
Q ss_pred cceEEEEEecccccchh-HHHHHHHHHHHHHHHhhcccccCccCCCCcceEEEEEeecCCCccccceeeccCCcCHHHHH
Q 007491 3 EKQLIVAVEGTAAMGPY-WQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSYCACLVQRSGWTKDVDIFL 81 (601)
Q Consensus 3 ~~DIVFVIDgTAsMGpY-i~~LktnYI~PiLEyF~~g~l~e~~~g~~s~eyGLVvYrd~~P~~e~~Vqr~GfTsD~~~Fl 81 (601)
|+|||||||.+++|+.. |+.+| .++..+++.|.. ...++|||.|.+.. ...+ .+....+..+++
T Consensus 2 e~DivfvlD~S~Sm~~~~~~~~k-~~~~~~i~~l~~----------~~~rv~vv~fs~~~---~~~~-~l~~~~~~~~~~ 66 (189)
T d1n3ya_ 2 EQDIVFLIDGSGSISSRNFATMM-NFVRAVISQFQR----------PSTQFSLMQFSNKF---QTHF-TFEEFRRSSNPL 66 (189)
T ss_dssp CEEEEEEEECCTTSCHHHHHHHH-HHHHHHHTTSCT----------TTEEEEEEEESSSE---EEEE-CHHHHHHCSSGG
T ss_pred CccEEEEEeCCCCCChHHHHHHH-HHHHHHHHHhCC----------CCCEEEEEEeeccc---eeec-cccccccHHHHH
Confidence 78999999999999876 77766 457777776632 45799999998765 2211 112223556778
Q ss_pred HHhcCcccCCCCCchhhHHHHHHHHHhc-cccCCCCCCCCCCCCCccEEEEeecCCCCCCCCCccccccccccccchhhh
Q 007491 82 HWLSTIPFAGGGFNDAAIAEGLSEALMM-FSVAPNGSQNQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEA 160 (601)
Q Consensus 82 qwLdsI~FsGGGfspaAVAEGLAeAL~~-fd~~~~~~q~~~~~~~qKhCILI~nSPPhplP~pVy~P~~~~~~~ge~~~~ 160 (601)
..|+++.+.||+- .+.+||..|++. |.... .......|.+||++|..++.-+
T Consensus 67 ~~i~~~~~~~g~t---~~~~al~~a~~~~f~~~~-----~~r~~~~kvivllTDG~~~~~~------------------- 119 (189)
T d1n3ya_ 67 SLLASVHQLQGFT---YTATAIQNVVHRLFHASY-----GARRDAAKILIVITDGKKEGDS------------------- 119 (189)
T ss_dssp GGGTTCCCCCSCB---CHHHHHHHHHTTTTSGGG-----TCCTTSEEEEEEEESSCCBSCS-------------------
T ss_pred HHHHhhhhhhhhc---hHHHHHHHHHHHHhhhhc-----CCCCCCceEEEEEecCCCCCCc-------------------
Confidence 8999999988773 567888888864 43211 1124578999999998766422
Q ss_pred hhcccCCCHHHHHHHhhhcCcEEEEeC
Q 007491 161 QAESRLSDAETVAKSFVQCSVSLSVIC 187 (601)
Q Consensus 161 ~~~s~laDaEqVAk~faEk~IsLSIIs 187 (601)
.+.+.+++.+.++||.++.|.
T Consensus 120 ------~~~~~~~~~~~~~gv~i~~Vg 140 (189)
T d1n3ya_ 120 ------LDYKDVIPMADAAGIIRYAIG 140 (189)
T ss_dssp ------SCHHHHHHHHHHTTCEEEEEE
T ss_pred ------ccHHHHHHHHHHCCCceEEEe
Confidence 156889999999999999995
No 4
>d1atza_ c.62.1.1 (A:) von Willebrand factor A3 domain, vWA3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.04 E-value=2e-09 Score=96.88 Aligned_cols=147 Identities=11% Similarity=0.222 Sum_probs=102.2
Q ss_pred cceEEEEEecccccc-hhHHHHHHHHHHHHHHHhhcccccCccCCCCcceEEEEEeecCCCccccceeeccCCcCHHHHH
Q 007491 3 EKQLIVAVEGTAAMG-PYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSYCACLVQRSGWTKDVDIFL 81 (601)
Q Consensus 3 ~~DIVFVIDgTAsMG-pYi~~LktnYI~PiLEyF~~g~l~e~~~g~~s~eyGLVvYrd~~P~~e~~Vqr~GfTsD~~~Fl 81 (601)
-.|||||||++++|+ ..|+.+| +++..+++.|.-+ ...+|+|||.|.+.. . .+-.+..+.|.++++
T Consensus 2 PlDivfliD~S~s~~~~~f~~~k-~~v~~~i~~~~i~--------~~~~rv~vv~f~~~~---~-~~~~l~~~~~~~~l~ 68 (184)
T d1atza_ 2 PLDVILLLDGSSSFPASYFDEMK-SFAKAFISKANIG--------PRLTQVSVLQYGSIT---T-IDVPWNVVPEKAHLL 68 (184)
T ss_dssp CEEEEEEEECSSSSCHHHHHHHH-HHHHHHHHHSCBS--------TTSEEEEEEEESSSE---E-EEECTTCCCCHHHHH
T ss_pred ceEEEEEEeCCCCCCHHHHHHHH-HHHHHHHHhcCCC--------CCCcEEEEEEEeccc---e-eeccccccccHHHHH
Confidence 379999999999995 4677766 5678888888421 135799999997543 1 112344467999999
Q ss_pred HHhcCcccCCCCCchhhHHHHHHHHHhccccCCCCCCCCCCCCCccEEEEeecCCCCCCCCCccccccccccccchhhhh
Q 007491 82 HWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQ 161 (601)
Q Consensus 82 qwLdsI~FsGGGfspaAVAEGLAeAL~~fd~~~~~~q~~~~~~~qKhCILI~nSPPhplP~pVy~P~~~~~~~ge~~~~~ 161 (601)
..|++|++.||+ ..+.+||..++..+.....+. +....|..||+++..++.
T Consensus 69 ~~i~~l~~~gg~---t~~~~al~~~~~~~~~~~~g~----R~~~~kvvvlltdg~~~d---------------------- 119 (184)
T d1atza_ 69 SLVDVMQREGGP---SQIGDALGFAVRYLTSEMHGA----RPGASKAVVILVTDVSVD---------------------- 119 (184)
T ss_dssp HHHHTCCCCCCC---CCHHHHHHHHHHHHHSCCTTC----CTTSEEEEEEEECSCCSS----------------------
T ss_pred HHHHhhhhcccc---cchhhhhhHHHHHhhhhhcCC----CCCCceEEEEEEecCccc----------------------
Confidence 999999998765 356677777776442111111 235788999999876543
Q ss_pred hcccCCCHHHHHHHhhhcCcEEEEeC--CCc-chHHHHH
Q 007491 162 AESRLSDAETVAKSFVQCSVSLSVIC--PKQ-LPKLTAI 197 (601)
Q Consensus 162 ~~s~laDaEqVAk~faEk~IsLSIIs--PRk-lP~Lk~L 197 (601)
+.+..|+.+.++||.+++|. ... ...|+.|
T Consensus 120 ------~~~~~a~~lk~~gi~v~~igiG~~~~~~~L~~i 152 (184)
T d1atza_ 120 ------SVDAAADAARSNRVTVFPIGIGDRYDAAQLRIL 152 (184)
T ss_dssp ------CCHHHHHHHHHTTEEEEEEEESSSSCHHHHHHH
T ss_pred ------hhhHHHHHHHHcCcEEEEEEeCCcCCHHHHHHH
Confidence 34677889999999999995 332 3445555
No 5
>d1shux_ c.62.1.1 (X:) Capillary morphogenesis protein 2 domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.01 E-value=7.4e-10 Score=98.24 Aligned_cols=138 Identities=17% Similarity=0.166 Sum_probs=101.3
Q ss_pred cceEEEEEecccccchhHHHHHHHHHHHHHHHhhcccccCccCCCCcceEEEEEeecCCCccccceeeccCCcCHHHHHH
Q 007491 3 EKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSYCACLVQRSGWTKDVDIFLH 82 (601)
Q Consensus 3 ~~DIVFVIDgTAsMGpYi~~LktnYI~PiLEyF~~g~l~e~~~g~~s~eyGLVvYrd~~P~~e~~Vqr~GfTsD~~~Flq 82 (601)
..|||||||++++|+.-|..+| .++..+++.|.. ...|+|||.|.+.. .. .+.+++|.+.+.+
T Consensus 5 ~~Div~llD~S~Sm~~~~~~~k-~~~~~~~~~~~~----------~~~rvglv~fs~~~---~~---~~~l~~~~~~~~~ 67 (181)
T d1shux_ 5 AFDLYFVLDKSGSVANNWIEIY-NFVQQLAERFVS----------PEMRLSFIVFSSQA---TI---ILPLTGDRGKISK 67 (181)
T ss_dssp CEEEEEEEECSGGGGGGHHHHH-HHHHHHHHHCCC----------TTEEEEEEEESSSE---EE---EEEEECCHHHHHH
T ss_pred ceEEEEEEeCCCCcccCHHHHH-HHHHHHHHHhcC----------CCCEEEEEEeecce---EE---EEEecCCHHHHHH
Confidence 4799999999999999998876 667889999843 35799999998866 22 2456778888888
Q ss_pred HhcCcccCCCCCchhhHHHHHHHHHhccccCCCCCCCCCCCCCccEEEEeecCCCCCCCCCccccccccccccchhhhhh
Q 007491 83 WLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQA 162 (601)
Q Consensus 83 wLdsI~FsGGGfspaAVAEGLAeAL~~fd~~~~~~q~~~~~~~qKhCILI~nSPPhplP~pVy~P~~~~~~~ge~~~~~~ 162 (601)
.|+.|....++- ...+.+||..|++.|.+.. .....|.+|||+|..+..-..
T Consensus 68 ~l~~l~~~~~~g-~t~~~~al~~~~~~~~~~~-------~~~~~~~ivliTDG~~~~~~~-------------------- 119 (181)
T d1shux_ 68 GLEDLKRVSPVG-ETYIHEGLKLANEQIQKAG-------GLKTSSIIIALTDGKLDGLVP-------------------- 119 (181)
T ss_dssp HHHHHHTCCCCS-CCCHHHHHHHHHHHHHHHT-------GGGSCEEEEEEECCCCCTTHH--------------------
T ss_pred HhhhcccccCCC-cchHHHHHHHHHHHhhhcc-------cCCCceEEEEecCCCCCCCcc--------------------
Confidence 888776554321 2467788888887664321 234678999999987654110
Q ss_pred cccCCCHHHHHHHhhhcCcEEEEeCCC
Q 007491 163 ESRLSDAETVAKSFVQCSVSLSVICPK 189 (601)
Q Consensus 163 ~s~laDaEqVAk~faEk~IsLSIIsPR 189 (601)
......++.+.+.||.+..|.-.
T Consensus 120 ----~~~~~~~~~~k~~gv~v~~vgig 142 (181)
T d1shux_ 120 ----SYAEKEAKISRSLGASVYCVGVL 142 (181)
T ss_dssp ----HHHHHHHHHHHHTTCEEEEEECS
T ss_pred ----HHHHHHHHHHHHCCCEEEEEEeC
Confidence 03467888999999999999543
No 6
>d1v7pc_ c.62.1.1 (C:) Integrin alpha2-beta1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.96 E-value=4.8e-09 Score=94.24 Aligned_cols=134 Identities=13% Similarity=0.211 Sum_probs=97.7
Q ss_pred ceEEEEEecccccchhHHHHHHHHHHHHHHHhhcccccCccCCCCcceEEEEEeecCCCccccceeeccCC--cCHHHHH
Q 007491 4 KQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSYCACLVQRSGWT--KDVDIFL 81 (601)
Q Consensus 4 ~DIVFVIDgTAsMGpYi~~LktnYI~PiLEyF~~g~l~e~~~g~~s~eyGLVvYrd~~P~~e~~Vqr~GfT--sD~~~Fl 81 (601)
.|||||||++.+|++ |+.+| +++..+++.|.-+ ....|+|||.|.+.. . ..+.|+ .+..+++
T Consensus 2 ~DivfvlD~S~Sv~~-f~~~k-~f~~~ii~~~~i~--------~~~~rv~vv~fs~~~---~---~~~~l~~~~~~~~~~ 65 (193)
T d1v7pc_ 2 IDVVVVCDESNSIYP-WDAVK-NFLEKFVQGLDIG--------PTKTQVGLIQYANNP---R---VVFNLNTYKTKEEMI 65 (193)
T ss_dssp EEEEEEEECCTTCCC-HHHHH-HHHHHHHHTSCBS--------TTSEEEEEEEESSSE---E---EEECTTTCSSHHHHH
T ss_pred EEEEEEEECCCCCcc-HHHHH-HHHHHHHHHcccC--------CCccEEEEEEeecce---e---eeecccchhhHHHHH
Confidence 599999999999986 78776 5788888888321 135899999998764 1 123444 5788999
Q ss_pred HHhcCcccCCCCCchhhHHHHHHHHHhcc-ccCCCCCCCCCCCCCccEEEEeecCCCCCCCCCccccccccccccchhhh
Q 007491 82 HWLSTIPFAGGGFNDAAIAEGLSEALMMF-SVAPNGSQNQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEA 160 (601)
Q Consensus 82 qwLdsI~FsGGGfspaAVAEGLAeAL~~f-d~~~~~~q~~~~~~~qKhCILI~nSPPhplP~pVy~P~~~~~~~ge~~~~ 160 (601)
+.++.+...+||. ..+.+||..|+..+ ... ...+....|.+||++|..|+.-.
T Consensus 66 ~~i~~~~~~~g~~--t~~~~AL~~a~~~~f~~~-----~~~R~~~~kvvVllTDG~s~d~~------------------- 119 (193)
T d1v7pc_ 66 VATSQTSQYGGDL--TNTFGAIQYARKYAYSAA-----SGGRRSATKVMVVVTDGESHDGS------------------- 119 (193)
T ss_dssp HHHHHCCCCCCSC--CCHHHHHHHHHHHTTSGG-----GTCCTTSEEEEEEEESSCCSCGG-------------------
T ss_pred HHHHhhhhhccCc--cchHHHHHHHHHhccccc-----cCCCCCCceEEEEEecCCcCCCc-------------------
Confidence 9999997766654 34678899888754 321 11234578999999998765411
Q ss_pred hhcccCCCHHHHHHHhhhcCcEEEEe
Q 007491 161 QAESRLSDAETVAKSFVQCSVSLSVI 186 (601)
Q Consensus 161 ~~~s~laDaEqVAk~faEk~IsLSII 186 (601)
+.+..++.+.+.||.++.|
T Consensus 120 -------~~~~~~~~~~~~gv~v~~I 138 (193)
T d1v7pc_ 120 -------MLKAVIDQCNHDNILRFGI 138 (193)
T ss_dssp -------GHHHHHHHHHHTTEEEEEE
T ss_pred -------cHHHHHHHHHhCCCEEEEE
Confidence 3456788889999999988
No 7
>d1mf7a_ c.62.1.1 (A:) Integrin alpha M (CR3, CD11b/CD18, Mac-1 alpha subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.96 E-value=1.2e-09 Score=98.31 Aligned_cols=141 Identities=12% Similarity=0.122 Sum_probs=99.3
Q ss_pred cceEEEEEecccccch-hHHHHHHHHHHHHHHHhhcccccCccCCCCcceEEEEEeecCCCccccceeeccCCcCHHHHH
Q 007491 3 EKQLIVAVEGTAAMGP-YWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSYCACLVQRSGWTKDVDIFL 81 (601)
Q Consensus 3 ~~DIVFVIDgTAsMGp-Yi~~LktnYI~PiLEyF~~g~l~e~~~g~~s~eyGLVvYrd~~P~~e~~Vqr~GfTsD~~~Fl 81 (601)
..|||||||++++|+. .|+.+| .++..+++.|.. ..+++|||.|.+.. ...+ .+....+..+++
T Consensus 5 ~~DivfvlD~S~s~~~~~~~~~k-~f~~~iv~~l~~----------~~~rv~vv~fs~~~---~~~~-~l~~~~~~~~~~ 69 (194)
T d1mf7a_ 5 DSDIAFLIDGSGSIIPHDFRRMK-EFVSTVMEQLKK----------SKTLFSLMQYSEEF---RIHF-TFKEFQNNPNPR 69 (194)
T ss_dssp CEEEEEEEECCTTSCHHHHHHHH-HHHHHHHHHHCC----------TTEEEEEEEESSSE---EEEE-CHHHHHHSCCHH
T ss_pred CeeEEEEEECCCCCCHHHHHHHH-HHHHHHHHHcCc----------CCceEEEEEEeccc---eeEE-eccccCCHHHHH
Confidence 5899999999999986 577765 557888888732 35799999998766 1111 122234567799
Q ss_pred HHhcCcccCCCCCchhhHHHHHHHHHhccccCCCCCCCCCCCCCccEEEEeecCCCCCCCCCccccccccccccchhhhh
Q 007491 82 HWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQ 161 (601)
Q Consensus 82 qwLdsI~FsGGGfspaAVAEGLAeAL~~fd~~~~~~q~~~~~~~qKhCILI~nSPPhplP~pVy~P~~~~~~~ge~~~~~ 161 (601)
+.|++|++.||+- .+..||..+++.+-....+ ......|.+|||+|..++.-+.
T Consensus 70 ~~i~~i~~~~~~t---~~~~al~~~~~~~~~~~~~----~~~~~~kvvvliTDG~~~~~~~------------------- 123 (194)
T d1mf7a_ 70 SLVKPITQLLGRT---HTATGIRKVVRELFNITNG----ARKNAFKILVVITDGEKFGDPL------------------- 123 (194)
T ss_dssp HHHTTCCCCCSCB---CHHHHHHHHHHTTTSGGGT----CCTTSEEEEEEEESSCCBSCSS-------------------
T ss_pred HHHhhhhhhhccc---hHHHHHHHHHHHHHhhhcc----CCCCCceEEEEEecCCCCCCch-------------------
Confidence 9999999887752 4677888888755211111 1234678999999987775332
Q ss_pred hcccCCCHHHHHHHhhhcCcEEEEeCCCc
Q 007491 162 AESRLSDAETVAKSFVQCSVSLSVICPKQ 190 (601)
Q Consensus 162 ~~s~laDaEqVAk~faEk~IsLSIIsPRk 190 (601)
+.+..++.+.+.||.+.+|....
T Consensus 124 ------~~~~~~~~~~~~gv~i~~VGi~~ 146 (194)
T d1mf7a_ 124 ------GYEDVIPEADREGVIRYVIGVGD 146 (194)
T ss_dssp ------CGGGTHHHHHHTTEEEEEEEESG
T ss_pred ------hHHHHHHHHHHcCCeeEEEecCC
Confidence 23566888899999999996654
No 8
>d1ijba_ c.62.1.1 (A:) von Willebrand factor A1 domain, vWA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.94 E-value=8.9e-09 Score=93.70 Aligned_cols=149 Identities=15% Similarity=0.211 Sum_probs=106.0
Q ss_pred cceEEEEEecccccch-hHHHHHHHHHHHHHHHhhcccccCccCCCCcceEEEEEeecCCCccccceeeccCCcCHHHHH
Q 007491 3 EKQLIVAVEGTAAMGP-YWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSYCACLVQRSGWTKDVDIFL 81 (601)
Q Consensus 3 ~~DIVFVIDgTAsMGp-Yi~~LktnYI~PiLEyF~~g~l~e~~~g~~s~eyGLVvYrd~~P~~e~~Vqr~GfTsD~~~Fl 81 (601)
..||+||||++++|+. .|+.+| +++..+++.|.-+ ....|+|||.|.+.. .. .-.+.+..+.++++
T Consensus 13 ~~Dl~fvlD~S~S~~~~~f~~~k-~fv~~~i~~l~~~--------~~~~rvavv~y~~~~---~~-~~~l~~~~~~~~l~ 79 (202)
T d1ijba_ 13 LLDLVFLLDGSSRLSEAEFEVLK-AFVVDMMERLRVS--------QKWVRVAVVEYHDGS---HA-YIGLKDRKRPSELR 79 (202)
T ss_dssp CEEEEEEEECBTTSCHHHHHHHH-HHHHHHHHTBCBS--------TTSEEEEEEEESSSE---EE-EECTTCCCCHHHHH
T ss_pred CeeEEEEEeCCCCCCHHHHHHHH-HHHHHHHHHhccC--------CCCcEEEEEEEecce---ee-ecCCcccchHHHHH
Confidence 4799999999999974 577766 6789999999432 135899999999866 22 12344567889999
Q ss_pred HHhcCcccCCCCCchhhHHHHHHHHHh-ccccCCCCCCCCCCCCCccEEEEeecCCCCCCCCCccccccccccccchhhh
Q 007491 82 HWLSTIPFAGGGFNDAAIAEGLSEALM-MFSVAPNGSQNQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEA 160 (601)
Q Consensus 82 qwLdsI~FsGGGfspaAVAEGLAeAL~-~fd~~~~~~q~~~~~~~qKhCILI~nSPPhplP~pVy~P~~~~~~~ge~~~~ 160 (601)
+.++.|+..||+.. .+.++|..++. .|.. . .+....|++|+|.+...+.-..
T Consensus 80 ~~i~~l~~~~g~~~--~~~~al~~~~~~~~~~---~----~r~~~~k~vivitdg~~~~~~~------------------ 132 (202)
T d1ijba_ 80 RIASQVKYAGSQVA--STSEVLKYTLFQIFSK---I----DRPEASRIALLLMASQEPQRMS------------------ 132 (202)
T ss_dssp HHHHTCCCCCBSCC--CHHHHHHHHHHHTSSS---C----SCTTSEEEEEEEECCCCCGGGC------------------
T ss_pred HHHHhhhhhhhccc--cHHHHHHHHHHHhhhh---c----cCCCCcceEEEecccCCCcccc------------------
Confidence 99999998887643 45667777775 3431 1 1235788999998886443211
Q ss_pred hhcccCCCHHHHHHHhhhcCcEEEEeC--CCc-chHHHHH
Q 007491 161 QAESRLSDAETVAKSFVQCSVSLSVIC--PKQ-LPKLTAI 197 (601)
Q Consensus 161 ~~~s~laDaEqVAk~faEk~IsLSIIs--PRk-lP~Lk~L 197 (601)
.+.+..++.+.++||.+.+|. +.- ...|+.|
T Consensus 133 ------~~~~~~~~~l~~~gv~i~~Vgig~~~~~~~L~~i 166 (202)
T d1ijba_ 133 ------RNFVRYVQGLKKKKVIVIPVGIGPHANLKQIRLI 166 (202)
T ss_dssp ------TTHHHHHHHHHHTTEEEEEEEESTTSCHHHHHHH
T ss_pred ------hHHHHHHHHHHHcCCeEEEEEeCCcCCHHHHHHH
Confidence 156889999999999999994 332 3445555
No 9
>d1q0pa_ c.62.1.1 (A:) Complement factor B domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.80 E-value=9e-09 Score=91.97 Aligned_cols=124 Identities=14% Similarity=0.164 Sum_probs=89.8
Q ss_pred ceEEEEEecccccc-hhHHHHHHHHHHHHHHHhhcccccCccCCCCcceEEEEEeecCCCcccccee-eccCCcCHHHHH
Q 007491 4 KQLIVAVEGTAAMG-PYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSYCACLVQ-RSGWTKDVDIFL 81 (601)
Q Consensus 4 ~DIVFVIDgTAsMG-pYi~~LktnYI~PiLEyF~~g~l~e~~~g~~s~eyGLVvYrd~~P~~e~~Vq-r~GfTsD~~~Fl 81 (601)
+|||||||.+++|+ ..|+.+| +.+..+++.|..+ ....|++||.|.+.. ...+. ...++.+...+.
T Consensus 2 lDivfvlD~SgSm~~~~~~~~k-~~~~~li~~l~~~--------~~~~rv~lv~f~~~~---~~~~~l~~~~~~~~~~l~ 69 (209)
T d1q0pa_ 2 MNIYLVLDGSDSIGASNFTGAK-KSLVNLIEKVASY--------GVKPRYGLVTYATYP---KIWVKVSEADSSNADWVT 69 (209)
T ss_dssp EEEEEEEECSTTTCHHHHHHHH-HHHHHHHHHHHTT--------TCCCEEEEEEESSSE---EEEECTTSGGGGCHHHHH
T ss_pred cCEEEEEeCCCCCChHHHHHHH-HHHHHHHHhcccC--------CCCcEEEEEEecCce---eEEecCccchhhHHHHHH
Confidence 69999999999995 7899888 6689999999531 135799999998765 22111 123456678888
Q ss_pred HHhcCcccCCCCCc-hhhHHHHHHHHHhccccCCCCCCCCCCCCCccEEEEeecCCCCCC
Q 007491 82 HWLSTIPFAGGGFN-DAAIAEGLSEALMMFSVAPNGSQNQQNVDGQRHCILVAASNPHPL 140 (601)
Q Consensus 82 qwLdsI~FsGGGfs-paAVAEGLAeAL~~fd~~~~~~q~~~~~~~qKhCILI~nSPPhpl 140 (601)
..|++|.+.++... ...+.+||..|...+..... ..+....+..|.+||++|..|-.-
T Consensus 70 ~~i~~i~~~~~~~~g~t~~~~al~~a~~~~~~~~~-~~~~~~~~~~kvvvl~TDG~~~~~ 128 (209)
T d1q0pa_ 70 KQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDD-VPPEGWNRTRHVIILMTDGLHNMG 128 (209)
T ss_dssp HHHHTCCTTSCSCTTCCCHHHHHHHHHHHHCCTTS-SCCTTGGGCEEEEEEEECSCCCSS
T ss_pred HHHHHhhhccccCCCCchHHHHHHHHHHHHHhhhc-cCccccCCCceEEEEEcCCCccCC
Confidence 99999988776543 47889999999987753221 122333456788999999876653
No 10
>d1mjna_ c.62.1.1 (A:) Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.58 E-value=5.7e-08 Score=86.67 Aligned_cols=112 Identities=13% Similarity=0.190 Sum_probs=80.2
Q ss_pred cceEEEEEecccccchh-HHHHHHHHHHHHHHHhhcccccCccCCCCcceEEEEEeecCCCccccceeeccC--CcCHHH
Q 007491 3 EKQLIVAVEGTAAMGPY-WQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSYCACLVQRSGW--TKDVDI 79 (601)
Q Consensus 3 ~~DIVFVIDgTAsMGpY-i~~LktnYI~PiLEyF~~g~l~e~~~g~~s~eyGLVvYrd~~P~~e~~Vqr~Gf--TsD~~~ 79 (601)
..|||||||++++|+.+ |+.+| +++..+++.|.. ..+|+|||.|.+.. .. .+.| ..+..+
T Consensus 2 ~~DivfllD~S~Si~~~~f~~~k-~f~~~~i~~i~~----------~~~rvgvv~fs~~~---~~---~~~l~~~~~~~~ 64 (179)
T d1mjna_ 2 NVDLVFLFDGSMSLQPDEFQKIL-DFMKDVMKKCSN----------TSYQFAAVQFSTSY---KT---EFDFSDYVKRKD 64 (179)
T ss_dssp CEEEEEEEECBTTCCHHHHHHHH-HHHHHHHHHTTT----------SSEEEEEEEESSSE---EE---EECHHHHHHHCC
T ss_pred CeEEEEEEECCCCCCHHHHHHHH-HHHHHHHHHhCC----------CceEEEEEEEeeee---eE---EechhhccchHH
Confidence 47999999999999876 66665 678888887733 46799999998755 21 1233 246677
Q ss_pred HHHHhcCcccCCCCCchhhHHHHHHHHHh-ccccCCCCCCCCCCCCCccEEEEeecCCCCC
Q 007491 80 FLHWLSTIPFAGGGFNDAAIAEGLSEALM-MFSVAPNGSQNQQNVDGQRHCILVAASNPHP 139 (601)
Q Consensus 80 FlqwLdsI~FsGGGfspaAVAEGLAeAL~-~fd~~~~~~q~~~~~~~qKhCILI~nSPPhp 139 (601)
|++.|++|++.||+ ..+.+||..|++ +|.... + .+....|.+|||+|..++.
T Consensus 65 ~~~~i~~i~~~~g~---t~~~~AL~~~~~~~f~~~~-g----~R~~~~kvvvllTDG~s~d 117 (179)
T d1mjna_ 65 PDALLKHVKHMLLL---TNTFGAINYVATEVFREEL-G----ARPDATKVLIIITDGEATD 117 (179)
T ss_dssp HHHHHTTCCCCCBC---CCHHHHHHHHHHHTSSGGG-T----CCTTSEEEEEEEESSCCSS
T ss_pred HHHHHhhhhcccCc---chHHHHHHHHHHHHhchhc-C----CCCCCCeEEEEEECCCCcc
Confidence 99999999998876 356678887774 554211 1 1235678999999986653
No 11
>d1jeyb2 c.62.1.4 (B:6-241) Ku80 subunit N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.39 E-value=4.5e-06 Score=75.04 Aligned_cols=145 Identities=16% Similarity=0.200 Sum_probs=88.2
Q ss_pred cceEEEEEecccccchh-------HHHHHHHHHHHHHHHhhcccccCccCCCCcceEEEEEeecCCC----c-----ccc
Q 007491 3 EKQLIVAVEGTAAMGPY-------WQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGS----Y-----CAC 66 (601)
Q Consensus 3 ~~DIVFVIDgTAsMGpY-------i~~LktnYI~PiLEyF~~g~l~e~~~g~~s~eyGLVvYrd~~P----~-----~e~ 66 (601)
+..||||||++++|..- |+.+| .++..+++.+-. .+ ..-++|||+|.+-.. . ...
T Consensus 2 k~aiv~~lD~S~SM~~~~~~~~srl~~ak-~~~~~~v~~~~~---~~-----~~d~vglV~f~~~~t~~~~~~~~~~~~i 72 (236)
T d1jeyb2 2 KAAVVLCMDVGFTMSNSIPGIESPFEQAK-KVITMFVQRQVF---AE-----NKDEIALVLFGTDGTDNPLSGGDQYQNI 72 (236)
T ss_dssp CEEEEEEEECCGGGGCCBTTBCCHHHHHH-HHHHHHHHHHHH---TT-----CCCEEEEEEESCSSCBSTTCTTTCSTTE
T ss_pred CceEEEEEECChhhccCCCCCCCHHHHHH-HHHHHHHHHHhc---CC-----CCCeEEEEEEcCCCcccccccccccceE
Confidence 45699999999999754 66665 566777776521 11 346999999987541 1 111
Q ss_pred ceeeccCCcCHHHHHHHhcCcccCCCCCchhhHHHHHHHHHhccccCCCCCCCCCCCCCccEEEEeecCC-CCCCCCCcc
Q 007491 67 LVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNVDGQRHCILVAASN-PHPLPTPVY 145 (601)
Q Consensus 67 ~Vqr~GfTsD~~~FlqwLdsI~FsGGGfspaAVAEGLAeAL~~fd~~~~~~q~~~~~~~qKhCILI~nSP-PhplP~pVy 145 (601)
++....-+.+ ...+..+..+...+++ +..+.++|..|+.++..... ......|++||++|-. |+.
T Consensus 73 ~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~al~~a~~~~~~~~~-----~~~~~~r~IiL~TDG~~~~~------ 138 (236)
T d1jeyb2 73 TVHRHLMLPD-FDLLEDIESKIQPGSQ--QADFLDALIVSMDVIQHETI-----GKKFEKRHIEIFTDLSSRFS------ 138 (236)
T ss_dssp EEEEEEECCC-HHHHHHHHTTCCCCSS--CCCHHHHHHHHHHHHHHHSS-----SSCCSEEEEEEECCCCSCCC------
T ss_pred EEEeccccch-hhHHHHHhhhcccccc--ccchhHHHHHHHHHHHHhhh-----cccccccEEEEEecCCCCcC------
Confidence 2222112233 3344444444444433 23466777777766533211 1123578999999863 111
Q ss_pred ccccccccccchhhhhhcccCCCHHHHHHHhhhcCcEEEEeCCCc
Q 007491 146 RPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVSLSVICPKQ 190 (601)
Q Consensus 146 ~P~~~~~~~ge~~~~~~~s~laDaEqVAk~faEk~IsLSIIsPRk 190 (601)
+ .+.+.+|+.+.+.+|+|++|..-.
T Consensus 139 ----------~----------~~~~~~a~~l~~~~I~i~~ig~g~ 163 (236)
T d1jeyb2 139 ----------K----------SQLDIIIHSLKKCDISLQFFLPFS 163 (236)
T ss_dssp ----------C----------TTHHHHHHHHHHTTEEEEEEESSC
T ss_pred ----------h----------HHHHHHHHHHHHcCCEEEEEecCC
Confidence 1 167899999999999999997753
No 12
>d1jeya2 c.62.1.3 (A:34-253) Ku70 subunit N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.88 E-value=0.00014 Score=64.58 Aligned_cols=144 Identities=17% Similarity=0.172 Sum_probs=82.0
Q ss_pred EEEEEecccccchh--------HHHHHHHHHHHHHHHhhcccccCccCCCCcceEEEEEeecCCC-----ccccce-eec
Q 007491 6 LIVAVEGTAAMGPY--------WQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGS-----YCACLV-QRS 71 (601)
Q Consensus 6 IVFVIDgTAsMGpY--------i~~LktnYI~PiLEyF~~g~l~e~~~g~~s~eyGLVvYrd~~P-----~~e~~V-qr~ 71 (601)
||||||++++|... |+..+ +++..+++.+... ....++|||+|++... +...++ ...
T Consensus 5 ivf~ID~S~SM~~~d~~~~~s~~~~~~-~~~~~~~~~~i~~--------~~~d~vglv~f~t~~~~~~~~~~~~~~~~~l 75 (220)
T d1jeya2 5 LIFLVDASKAMFESQSEDELTPFDMSI-QCIQSVYISKIIS--------SDRDLLAVVFYGTEKDKNSVNFKNIYVLQEL 75 (220)
T ss_dssp EEEEEECSGGGGCCCSSSSCCHHHHHH-HHHHHHHHHHHHT--------TCCCEEEEEEESCSSCBSTTCCTTEEEEEEE
T ss_pred EEEEEECCcccCccccCCCCCHHHHHH-HHHHHHHHHHhhC--------CCCCEEEEEEeccccccCCCcccchhhhhcc
Confidence 99999999999553 44444 4566777666321 1346899999987641 122222 111
Q ss_pred --cCCcCHHHHHHHhcC-----cccCCCCCchhhHHHHHHHHHhccccCCCCCCCCCCCCCccEEEEeecCC-CCCCCCC
Q 007491 72 --GWTKDVDIFLHWLST-----IPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNVDGQRHCILVAASN-PHPLPTP 143 (601)
Q Consensus 72 --GfTsD~~~FlqwLds-----I~FsGGGfspaAVAEGLAeAL~~fd~~~~~~q~~~~~~~qKhCILI~nSP-PhplP~p 143 (601)
.-+.++..+..++.. +....+......+.+||..|+.+|.... .....|.+|||+|-- |+.-..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~al~~a~~~~~~~~-------~~~~~k~IiliTDg~~~~~~~~- 147 (220)
T d1jeya2 76 DNPGAKRILELDQFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQ-------FKMSHKRIMLFTNEDNPHGNDS- 147 (220)
T ss_dssp ECCCHHHHHHHHTTSHHHHHHHHHHHHCCSCCCCHHHHHHHHHHHHHTCS-------SCEEEEEEEEEESCSCTTTTCH-
T ss_pred cCchHHHHHhhhhhhhhhhhhhhhhcccCCCCccHHHHHHHHHHHHHhcc-------cccCCcEEEEEecCCCCCCCcc-
Confidence 222333333222211 0000011122458899999999986422 123468899999874 333110
Q ss_pred ccccccccccccchhhhhhcccCCCHHHHHHHhhhcCcEEEEe
Q 007491 144 VYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVSLSVI 186 (601)
Q Consensus 144 Vy~P~~~~~~~ge~~~~~~~s~laDaEqVAk~faEk~IsLSII 186 (601)
. + ...+.+.|+.+.+++|.+++|
T Consensus 148 ------------~--~------~~~~~~~a~~~~~~gv~i~~i 170 (220)
T d1jeya2 148 ------------A--K------ASRARTKAGDLRDTGIFLDLM 170 (220)
T ss_dssp ------------H--H------HHHHHHHHHHHHHHTEEEEEE
T ss_pred ------------h--h------hHHHHHHHHHHhhhcceEEEE
Confidence 0 0 013567888899999999999
No 13
>d1pd0a3 c.62.1.2 (A:301-552) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.99 E-value=0.08 Score=49.16 Aligned_cols=181 Identities=11% Similarity=0.096 Sum_probs=90.8
Q ss_pred EEEEEecccccchhHHHHHHHHHHHHHHHhhcccccCccCCCCcceEEEEEeecCC-----C------------------
Q 007491 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHG-----S------------------ 62 (601)
Q Consensus 6 IVFVIDgTAsMGpYi~~LktnYI~PiLEyF~~g~l~e~~~g~~s~eyGLVvYrd~~-----P------------------ 62 (601)
.|||||.|. +.+.+.++.-+++.+.. .++.-+....+.++|||+|.+.= .
T Consensus 6 ~vFvID~s~------~a~~~g~l~~~~~si~~-~l~~l~~~~~~~~VgiItf~~~V~~y~l~~~~~~~~~~~~~~~~~~~ 78 (252)
T d1pd0a3 6 YCFLIDVSQ------SSIKSGLLATTINTLLQ-NLDSIPNHDERTRISILCVDNAIHYFKIPLDSENNEESADQINMMDI 78 (252)
T ss_dssp EEEEEECSH------HHHHHTHHHHHHHHHHT-TTTTSCCTTSCCEECEEEESSSEEEEECCCGGGC-------CEEECC
T ss_pred EEEEEECCH------HHhhhhHHHHHHHHHHH-HHHhCcCCCCCcEEEEEEECCEEEEEEccCCccccccccccccccch
Confidence 699999984 44444444444444433 22111111257899999996521 0
Q ss_pred --ccccceee-c----cCCcCHHHHHHHhcCcccCCC--CCchhhHHHHHHHHHhccccCCCCCCCCCCCCCccEEEEee
Q 007491 63 --YCACLVQR-S----GWTKDVDIFLHWLSTIPFAGG--GFNDAAIAEGLSEALMMFSVAPNGSQNQQNVDGQRHCILVA 133 (601)
Q Consensus 63 --~~e~~Vqr-~----GfTsD~~~FlqwLdsI~FsGG--GfspaAVAEGLAeAL~~fd~~~~~~q~~~~~~~qKhCILI~ 133 (601)
..+.++-. . .+-..-+.+...|+.|+-.-. .....|..-||..|+.++... --++++..
T Consensus 79 ~dl~~~~~p~~~~~lv~~~e~~~~i~~~L~~l~~~~~~~~~~~~~~G~Al~~a~~~l~~~------------gGkI~~f~ 146 (252)
T d1pd0a3 79 ADLEEPFLPRPNSMVVSLKACRQNIETLLTKIPQIFQSNLITNFALGPALKSAYHLIGGV------------GGKIIVVS 146 (252)
T ss_dssp CCTTCC-----TTTSEETTTTHHHHHHHHHHHHHHTTTCCCCCCCHHHHHHHHHHHHTTT------------CEEEEEEE
T ss_pred hhhhhccCCCCccceeeHHHHHHHHHHHHHhChhhcccCCCCcccHHHHHHHHHHHHhcC------------CCEEEEEe
Confidence 00001100 0 123344556667777744322 234567888999998887421 12455555
Q ss_pred cCCCCCCC-CCccccccccccccchhhhhhcccCCCHHHHHHHhhhcCcEEEEe-CCC-c--chHHHHHHHHhcCCC
Q 007491 134 ASNPHPLP-TPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVSLSVI-CPK-Q--LPKLTAIYNAAKRNP 205 (601)
Q Consensus 134 nSPPhplP-~pVy~P~~~~~~~ge~~~~~~~s~laDaEqVAk~faEk~IsLSII-sPR-k--lP~Lk~Lfeka~~n~ 205 (601)
.++|-.=| .-+.+......+..+.....-.....=.+.+|..+.+++|.+.+. ++. . +..|..|-++.++..
T Consensus 147 sg~pt~GpG~l~~r~~~~~~~~~~~~~~~~~~a~~fY~~la~~~~~~~isvdlF~~~~~~~dl~~l~~l~~~TGG~~ 223 (252)
T d1pd0a3 147 GTLPNLGIGKLQRRNESGVVNTSKETAQLLSCQDSFYKNFTIDCSKVQITVDLFLASEDYMDVASLSNLSRFTAGQT 223 (252)
T ss_dssp SSCCCSSTTCCCC--------------------CCHHHHHHHHHTTTTEEEEEEEEESBCCCHHHHHHHHHTTTCCE
T ss_pred cCCCCCCCcccccccccccccCcccchhcccchHHHHHHHHHHHHHCCEEEEEEeccccccCcHHHhhHhhcCCceE
Confidence 55553222 111111000000000000000111122479999999999888776 443 3 778999998887764
No 14
>d1yvra2 c.62.1.5 (A:364-537) 60-kda SS-A/Ro ribonucleoprotein, RoRNP {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=95.88 E-value=0.018 Score=49.70 Aligned_cols=97 Identities=14% Similarity=0.085 Sum_probs=53.2
Q ss_pred cceEEEEEecccccchh-----HHHHHHHHHHHHHHHhhcccccCccCCCCcceEEEEEeecCCCccccceeeccCC--c
Q 007491 3 EKQLIVAVEGTAAMGPY-----WQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSYCACLVQRSGWT--K 75 (601)
Q Consensus 3 ~~DIVFVIDgTAsMGpY-----i~~LktnYI~PiLEyF~~g~l~e~~~g~~s~eyGLVvYrd~~P~~e~~Vqr~GfT--s 75 (601)
-+++|||||.++||+.. +...+.--+ -.+..+. .+-+++||.|.+.. ....++ .
T Consensus 5 g~~~vl~iD~SGSM~~~~~~~~~~~~~~a~~-~~~~~~~-----------~~~~~~vv~F~~~~-------~~~~~~~~~ 65 (174)
T d1yvra2 5 GKRFLLAIDVSASMNQRVLGSILNASVVAAA-MCMLVAR-----------TEKDSHMVAFSDEM-------LPCPITVNM 65 (174)
T ss_dssp CCCEEEEEECSGGGGSBSTTSSCBHHHHHHH-HHHHHHH-----------HCSSEEEEEESSSE-------ECCSCCTTS
T ss_pred CCeEEEEEECccccCCcccCccHHHHHHHHH-HHHHhhc-----------cCCcEEEEEecCCc-------cccccCccc
Confidence 37899999999999643 222222111 1111111 23478999997742 223343 3
Q ss_pred CHHHHHHHhcCcccCCCCCchhhHHHHHHHHHhccccCCCCCCCCCCCCCccEEEEeecCC
Q 007491 76 DVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNVDGQRHCILVAASN 136 (601)
Q Consensus 76 D~~~FlqwLdsI~FsGGGfspaAVAEGLAeAL~~fd~~~~~~q~~~~~~~qKhCILI~nSP 136 (601)
++.+.+..++.+. |||-. +..+|..|+.... ..+.+|||+|--
T Consensus 66 ~~~~~~~~~~~~~--~ggT~---i~~al~~a~~~~~-------------~~~~ivllTDg~ 108 (174)
T d1yvra2 66 LLHEVVEKMSDIT--MGSTD---CALPMLWAQKTNT-------------AADIFIVFTDCE 108 (174)
T ss_dssp CHHHHHHHHTTCC--CSCCC---TTHHHHHHHHTTC-------------CCSEEEEEECCC
T ss_pred hHHHHHHHhhccc--ccccc---HHHHHHHHHhhhc-------------cCCEEEEEeCCC
Confidence 4555555665543 44432 3345666664321 235689998864
No 15
>d2qtva3 c.62.1.2 (A:120-390) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.79 E-value=0.14 Score=47.96 Aligned_cols=119 Identities=11% Similarity=0.076 Sum_probs=62.4
Q ss_pred HHHHHhcCcccCCCC-----CchhhHHHHHHHHHhccccCCCCCCCCCCCCCccEEEEeecCCCCCCC-CCccccccccc
Q 007491 79 IFLHWLSTIPFAGGG-----FNDAAIAEGLSEALMMFSVAPNGSQNQQNVDGQRHCILVAASNPHPLP-TPVYRPQMQNL 152 (601)
Q Consensus 79 ~FlqwLdsI~FsGGG-----fspaAVAEGLAeAL~~fd~~~~~~q~~~~~~~qKhCILI~nSPPhplP-~pVy~P~~~~~ 152 (601)
.+...|+.|+-.... -...|...||..|+.++.-.. .+.--++++...++|--=| .-+.+..-..+
T Consensus 118 ~i~~lL~~L~~~~~~~~~~~~~~~~~G~Al~~A~~ll~~~~--------~~~gGkI~~F~sg~pt~GpG~l~~r~~~~~~ 189 (271)
T d2qtva3 118 KLNQLLENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCY--------KNIPARIILFASGPGTVAPGLIVNSELKDPL 189 (271)
T ss_dssp HHHHHHHHCCCCCCCCCTTBCCCCCHHHHHHHHHHHHHHHC--------TTSCEEEEEEESSCCCSSSSCSSCSBTTSCC
T ss_pred HHHHHHHHhccCcccCCCCCCcccchHHHHHHHHHHHHhhc--------cCCCcEEEEEeCCCCCCCCcccccccccccc
Confidence 344466777433222 224678899999998875221 1233567777777774322 21111100000
Q ss_pred c-ccchhh-hhhc--ccCCCHHHHHHHhhhcCcEEEEe--CCCc--chHHHHHHHHhcCCC
Q 007491 153 D-QNENNE-AQAE--SRLSDAETVAKSFVQCSVSLSVI--CPKQ--LPKLTAIYNAAKRNP 205 (601)
Q Consensus 153 ~-~ge~~~-~~~~--s~laDaEqVAk~faEk~IsLSII--sPRk--lP~Lk~Lfeka~~n~ 205 (601)
- +.+..+ ..++ ..-.=.+.+|+.+.+.+|.+.+. +... +..|..|-+..++..
T Consensus 190 rs~~d~~k~~~~~~~~a~~fY~~la~~~~~~~isvDlF~~s~~~~dl~~l~~l~~~TGG~v 250 (271)
T d2qtva3 190 RSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGCYDQIGMSEMKQLTDSTGGVL 250 (271)
T ss_dssp CCHHHHHTTCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEECSSCCSHHHHTHHHHTTTCCE
T ss_pred CCccchhhhhhhhhhhHHHHHHHHHHHHHHCCeEEEEEEecCccCChHHHHhHHhhCCceE
Confidence 0 000000 0000 00011478999999999877766 5554 778888888776653
No 16
>d1j93a_ c.1.22.1 (A:) Uroporphyrinogen decarboxylase, UROD {Tobacco (Nicotiana tabacum), UROD-III [TaxId: 4097]}
Probab=35.54 E-value=30 Score=32.27 Aligned_cols=80 Identities=16% Similarity=0.202 Sum_probs=50.6
Q ss_pred cceEEEEEeccccc--chhHHHHHHHHHHHHHHHhhcccccCccCCCCcceE-EEEEeecCCCcc----cccee--eccC
Q 007491 3 EKQLIVAVEGTAAM--GPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVEL-SLVTFNTHGSYC----ACLVQ--RSGW 73 (601)
Q Consensus 3 ~~DIVFVIDgTAsM--GpYi~~LktnYI~PiLEyF~~g~l~e~~~g~~s~ey-GLVvYrd~~P~~----e~~Vq--r~Gf 73 (601)
-+|+|++.|..|++ ..+|++....|+.++++.+... ...+ -++..++...+- ++-+. -+.|
T Consensus 196 Gad~i~ifDs~a~~l~~~~f~~~~~~~~~~i~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~is~d~ 265 (343)
T d1j93a_ 196 GAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLT----------HPNLPLILYASGSGGLLERLPLTGVDVVSLDW 265 (343)
T ss_dssp TCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHH----------STTCCEEEECSSCTTTGGGGGGGCCSEEECCT
T ss_pred CCceEEeccHHHHHHhhHhhhhhccHHHHHHHhhhhhc----------CCCCceeeecccccchhhhhhccCcccccccc
Confidence 47999999999986 3366777777777777777441 1122 222233222211 22222 3578
Q ss_pred CcCHHHHHHHh-cCcccCCC
Q 007491 74 TKDVDIFLHWL-STIPFAGG 92 (601)
Q Consensus 74 TsD~~~FlqwL-dsI~FsGG 92 (601)
..|+.++.+.+ +++.+-|+
T Consensus 266 ~~~l~~a~~~~~~~~~iqGN 285 (343)
T d1j93a_ 266 TVDMADGRRRLGPNVAIQGN 285 (343)
T ss_dssp TSCHHHHHHHTCSSSEEECC
T ss_pred ccchHHHHHHhCCCeEEEeC
Confidence 99999999999 57777775
No 17
>d2ozlb2 c.48.1.2 (B:192-329) E1-beta subunit of pyruvate dehydrogenase, C-domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.75 E-value=41 Score=27.71 Aligned_cols=24 Identities=17% Similarity=0.141 Sum_probs=22.2
Q ss_pred CHHHHHHHhhhcCcEEEEeCCCcc
Q 007491 168 DAETVAKSFVQCSVSLSVICPKQL 191 (601)
Q Consensus 168 DaEqVAk~faEk~IsLSIIsPRkl 191 (601)
.++..|+.+.++||++.||.+|.+
T Consensus 27 ~al~aa~~L~~~gi~~~vid~~~l 50 (138)
T d2ozlb2 27 HCLEAAAVLSKEGVECEVINMRTI 50 (138)
T ss_dssp HHHHHHHHHHTTTCCEEEEECCEE
T ss_pred hHHHHhhhhcccCcceEEEEeccc
Confidence 678899999999999999999996
No 18
>d1w85b2 c.48.1.2 (B:193-324) Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=20.31 E-value=47 Score=26.86 Aligned_cols=24 Identities=13% Similarity=0.171 Sum_probs=22.0
Q ss_pred CHHHHHHHhhhcCcEEEEeCCCcc
Q 007491 168 DAETVAKSFVQCSVSLSVICPKQL 191 (601)
Q Consensus 168 DaEqVAk~faEk~IsLSIIsPRkl 191 (601)
.+.++|+.+.++||+..||.+|.+
T Consensus 23 ~al~Aa~~L~~~gi~~~vid~~~l 46 (132)
T d1w85b2 23 ESLKAAAELEKEGISAEVVDLRTV 46 (132)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSEE
T ss_pred HHHHHHHHHHhcCCCeEEEeeecc
Confidence 578899999999999999999986
Done!