BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007494
(601 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 194/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 77 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 132
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 133 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 191
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ ++
Sbjct: 192 NKLQRTNP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLH 245
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++T Y L K
Sbjct: 246 GKDPE-------TGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAE 298
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 299 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 358
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
I + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 359 IMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 413
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 414 HEATLVLGMMLKHFDFE 430
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 193/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFFGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 193/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 74 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 129
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 130 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 188
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 189 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 242
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 243 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 295
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 296 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDE 355
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 356 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 410
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 411 HEATLVLGMMLKHFDFE 427
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 193/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 74 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 129
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 130 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 188
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 189 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 242
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 243 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 295
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 296 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 355
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 356 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 410
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 411 HEATLVLGMMLKHFDFE 427
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 193/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 72 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 127
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 128 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 186
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 187 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 240
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 241 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 293
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 294 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 353
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 408
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 409 HEATLVLGMMLKHFDFE 425
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 193/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 193/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 193/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 193/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 193/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGKQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 191/380 (50%), Gaps = 53/380 (13%)
Query: 181 LAEILEFVMGKGLIPADGEI--------WRVRRRAIVPALHQK----YVAAMIDLFGKAT 228
L++ L+FV DGE W+ ++P+ Q+ Y A M+D+
Sbjct: 71 LSQALKFVRD---FAGDGEFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----A 123
Query: 229 DRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLR 286
+L +K + ++ E E+ +RLTLD IG FNY F+S D + ++ L
Sbjct: 124 VQLVQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALD 182
Query: 287 EAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEE 346
EA ++ P + P + + ++ +K++ND +D +IA ++ E+
Sbjct: 183 EAMNKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTH 236
Query: 347 YMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK------- 399
+N +DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 237 MLNGKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK 289
Query: 400 ----VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKR 454
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++
Sbjct: 290 AAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 455 GEDIFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDM 513
G+++ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQ 404
Query: 514 FATFENIVAVAMLVRQFNFQ 533
FA E + + M+++ F+F+
Sbjct: 405 FALHEATLVLGMMLKHFDFE 424
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 194/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL+ + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 72 LSQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 127
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 128 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 186
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 187 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 240
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHE+++ +L++ Y L K
Sbjct: 241 GKDPE-------TGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAE 293
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 294 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 353
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 408
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 409 HEATLVLGMMLKHFDFE 425
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 193/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 74 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 129
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 130 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 188
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 189 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 242
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 243 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 295
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 296 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDE 355
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 356 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 410
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 411 HEATLVLGMMLKHFDFE 427
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 193/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 194/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL+ + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHE+++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 193/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 193/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 72 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 127
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 128 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 186
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 187 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 240
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 241 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 293
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 294 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDE 353
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 408
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 409 HEATLVLGMMLKHFDFE 425
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 194/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL+ + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHE+++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 193/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + P+G G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPYGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 193/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W ++P+ Q+ Y A M+D+ +L
Sbjct: 72 LSQALKFVRDFAGDGLFTSWTHEKNWCKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 127
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG + FNY F+S D + ++ L EA
Sbjct: 128 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLSGFNYRFNSFYRDQPHPFITSMVRALDEAM 186
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 187 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 240
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 241 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 293
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 294 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 353
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 408
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 409 HEATLVLGMMLKHFDFE 425
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 192/377 (50%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHE ++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 192/377 (50%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LI GHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 192/377 (50%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LI GHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 192/377 (50%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LI GHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 192/377 (50%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 72 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 127
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 128 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 186
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 187 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 240
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 241 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 293
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 294 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 353
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C G FA
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACPGQQFAL 408
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 409 HEATLVLGMMLKHFDFE 425
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 192/377 (50%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACEGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 192/377 (50%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LI GHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 192/377 (50%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LI GHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 192/377 (50%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHE ++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 192/377 (50%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LI GHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 192/377 (50%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHE ++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 192/377 (50%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHE ++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 182/356 (51%), Gaps = 50/356 (14%)
Query: 201 WRVRRRAIVPALHQK----YVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
W+ R ++P L Q+ Y A M+D+ +L +K + S+ E E+ +RLTL
Sbjct: 97 WKKARNILLPRLSQQAMKGYHAMMVDI----AVQLVQKWERLNSD-EHIEVPEDMTRLTL 151
Query: 257 DVIGKAVFNYDFDSLTND------TGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPR 310
D IG FNY +S D T +V A+ V+ + + R+ P ++
Sbjct: 152 DTIGLCGFNYRINSFYRDQPHPFITSMVRALDEVMNKLQ-RANPDDPAYD--------EN 202
Query: 311 LKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQ 370
++ +K++ND +D +IA ++ E+ ++ +DP +G+ + +
Sbjct: 203 KRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLHGKDPE-------TGEPLDDEN 254
Query: 371 LRDDLMTMLIAGHETSAAVLTWTFYLLSK-----------VDSILGDRFPTIGDMKKLKY 419
+R ++T LIAGHET++ +LT+ Y L K +L D P+ +K+LKY
Sbjct: 255 IRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 314
Query: 420 TARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGEDIFISVWNLHRSPHIW-DDADK 477
V+NE+LR++P P + ED +L G+YP+++G+++ + + LHR +W DD ++
Sbjct: 315 VGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEE 374
Query: 478 FNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQ 533
F PER+ NP+ Q + + PFG G R C+G FA E + + M+++ F+F+
Sbjct: 375 FRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 193/377 (51%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + P+G G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPWGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 192/377 (50%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + P G G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPHGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 192/377 (50%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + P G G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPAGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 191/377 (50%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T L AGHE ++ +L++ Y L K
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAE 292
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 407
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 408 HEATLVLGMMLKHFDFE 424
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 191/377 (50%), Gaps = 47/377 (12%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 72 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 127
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 128 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 186
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 187 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 240
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---------- 399
+DP +G+ + + +R ++T L AGHE ++ +L++ Y L K
Sbjct: 241 GKDPE-------TGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAE 293
Query: 400 -VDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 457
+L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 294 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDE 353
Query: 458 IFISVWNLHRSPHIW-DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFAT 516
+ + + LHR IW DD ++F PER+ NP+ Q + + PFG G R C+G FA
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFAL 408
Query: 517 FENIVAVAMLVRQFNFQ 533
E + + M+++ F+F+
Sbjct: 409 HEATLVLGMMLKHFDFE 425
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 179/352 (50%), Gaps = 42/352 (11%)
Query: 201 WRVRRRAIVPALHQK----YVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
W+ ++P+ Q+ Y A M+D+ +L +K + ++ E E+ +RLTL
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDI----AVQLVQKWERLNAD-EHIEVPEDMTRLTL 150
Query: 257 DVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKV 314
D IG FNY F+S D + ++ L EA ++ P + P + + ++
Sbjct: 151 DTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLRRANP--DDPAYDE---NKRQF 205
Query: 315 NAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDD 374
+K++ND +D +IA ++ E+ +N +DP +G+ + + +R
Sbjct: 206 QEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLNGKDPE-------TGEPLDDENIRYQ 257
Query: 375 LMTMLIAGHETSAAVLTWTFYLLSK-----------VDSILGDRFPTIGDMKKLKYTARV 423
++T L AGHE ++ +L++ Y L K +L D P+ +K+LKY V
Sbjct: 258 IITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 424 INESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGEDIFISVWNLHRSPHIW-DDADKFNPE 481
+NE+LRL+P P + ED VL G+YP+++G+++ + + LHR IW DD ++F PE
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 482 RWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQ 533
R+ NP+ Q + + PFG G R C+G FA E + + M+++ F+F+
Sbjct: 378 RF----ENPSAIPQ-HAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 180/356 (50%), Gaps = 50/356 (14%)
Query: 201 WRVRRRAIVPALHQK----YVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
W+ ++P+ Q+ Y A M+D+ +L +K + ++ E E+ +RLTL
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDI----AVQLVQKWERLNAD-EYIEVPEDMTRLTL 150
Query: 257 DVIGKAVFNYDFDSLTNDT------GIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPR 310
D IG FNY F+S D ++ A+ V+ + + R+ P ++
Sbjct: 151 DTIGLCGFNYRFNSFYRDQPHPFIISMIRALDEVMNKLQ-RANPDDPAYD--------EN 201
Query: 311 LKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQ 370
++ +K++ND +D +IA ++ E+ + +N +DP +G+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTQMLNGKDPE-------TGEPLDDGN 253
Query: 371 LRDDLMTMLIAGHETSAAVLTWTFYLLSK-----------VDSILGDRFPTIGDMKKLKY 419
+ ++T LIAGHET++ +L++ Y L K +L D P+ +K+LKY
Sbjct: 254 ISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDPVPSYKQVKQLKY 313
Query: 420 TARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGEDIFISVWNLHRSPHIW-DDADK 477
V+NE+LRL+P P + ED VL G+YP+++G+++ + + LHR IW DD ++
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEE 373
Query: 478 FNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQ 533
F PER+ NP+ Q + + PFG G R C+G FA E + + M+++ F+F+
Sbjct: 374 FRPERF----ENPSAIPQ-HAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 179/352 (50%), Gaps = 42/352 (11%)
Query: 201 WRVRRRAIVPALHQK----YVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
W+ ++P+ Q+ Y A M+D+ +L +K + ++ E E+ +RLTL
Sbjct: 97 WKKAHNILLPSFSQQAMKGYHAMMVDI----AVQLVQKWERLNAD-EHIEVPEDMTRLTL 151
Query: 257 DVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKV 314
D IG FNY F+S D + ++ L EA ++ P + P + + ++
Sbjct: 152 DTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLRRANP--DDPAYDE---NKRQF 206
Query: 315 NAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDD 374
+K++ND +D +IA ++ E+ +N +DP +G+ + + +R
Sbjct: 207 QEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLNGKDPE-------TGEPLDDENIRYQ 258
Query: 375 LMTMLIAGHETSAAVLTWTFYLLSK-----------VDSILGDRFPTIGDMKKLKYTARV 423
++T L AGHE ++ +L++ Y L K +L D P+ +K+LKY V
Sbjct: 259 IITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSHKQVKQLKYVGMV 318
Query: 424 INESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGEDIFISVWNLHRSPHIW-DDADKFNPE 481
+NE+LRL+P P + ED VL G+YP+++G+++ + + LHR +W DD ++F PE
Sbjct: 319 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPE 378
Query: 482 RWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQ 533
R+ NP+ Q + + PFG G R C+G FA E + + M+++ F+F+
Sbjct: 379 RF----ENPSAIPQ-HAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 189/414 (45%), Gaps = 46/414 (11%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGK-GLIPADGEIW 201
+G + R+ GPK+ V++P + L N + G L E LE ++GK G+ A+G +
Sbjct: 54 HGDVVRIKLGPKTVYAVTNPELTG-ALALNPDYHIAGPLWESLEGLLGKEGVATANGPLH 112
Query: 202 RVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGK 261
R +RR I PA + A +G + L G+ + S R+ + V +
Sbjct: 113 RRQRRTIQPAFRLDAIPA----YGPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAAR 168
Query: 262 AVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPI-PVWEIPIWKDISPRLKKVNAALKL 320
+ + + V A+ TV R R V P+ P++ +P+ P ++ N AL
Sbjct: 169 CLLRGQYMDERAERLCV-ALATVFRGMYRRMVVPLGPLYRLPL-----PANRRFNDALAD 222
Query: 321 INDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS-ILHFLLAS----GDDVSSKQLRDDL 375
++ +D++IA E + Q P +L LL + GD + +++ D +
Sbjct: 223 LHLLVDEIIA--------------ERRASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQV 268
Query: 376 MTMLIAGHETSAAVLTWTFYLLS-----------KVDSILGDRFPTIGDMKKLKYTARVI 424
+ +L G ET A+ + W L+ +V+++ G R D++KL++T VI
Sbjct: 269 VAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFEDVRKLRHTGNVI 328
Query: 425 NESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWP 484
E++RL P VL RR++ + LG Y I G DI S + + R P +DD +F+P+RW
Sbjct: 329 VEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRW- 387
Query: 485 LDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALGA 538
P Y PF G RKC D F+ + + A L ++ F+ G+
Sbjct: 388 --LPERAANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGS 439
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 198/435 (45%), Gaps = 56/435 (12%)
Query: 136 LYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMG--KGL 193
++L YG I+ + G K+ +IV +AK +L K +S L+ KG+
Sbjct: 35 FFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGI 94
Query: 194 IPAD-GEIWRVRRRAIVP--ALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESL 250
AD G W++ RR + AL + + + + LC L T + D +
Sbjct: 95 AFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISF-PV 153
Query: 251 FSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLRE--AEDRSVAPIPVWEIPIWKDIS 308
F +T +VI FN + + + +++ + + ++D V +P W I
Sbjct: 154 FVAVT-NVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVP------WLKIF 206
Query: 309 PR--LKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLAS---- 362
P L+K+ + +K+ ND L+ ++ + E++ ++ ++L L+ +
Sbjct: 207 PNKTLEKLKSHVKIRNDLLNKILE-----------NYKEKFRSDSITNMLDTLMQAKMNS 255
Query: 363 -----GDDVSSKQLRDDLMTMLI-----AGHETSAAVLTWTFYLL-----------SKVD 401
G D S+ L D+ + I AG ET+ +V+ WT L ++D
Sbjct: 256 DNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEID 315
Query: 402 SILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPVLI-RRSLEDDVLGKYPIKRGEDIF 459
+G R PTI D +L I E LRL P P+LI ++ D +G++ + +G ++
Sbjct: 316 QNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVI 375
Query: 460 ISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFEN 519
I++W LH + W D+F PER+ L+ + YLPFG GPR C+G++ A E
Sbjct: 376 INLWALHHNEKEWHQPDQFMPERF-LNPAGTQLISPSVSYLPFGAGPRSCIGEILARQEL 434
Query: 520 IVAVAMLVRQFNFQM 534
+ +A L+++F+ ++
Sbjct: 435 FLIMAWLLQRFDLEV 449
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 191/425 (44%), Gaps = 50/425 (11%)
Query: 138 ELYLTYGGIFRLTFGPKSFLIVSDPSMAKHIL-KDNSKGYSKGILAEILEFVMGKGLIPA 196
E + YG ++ G + L ++DP M K +L K+ ++ + F M + A
Sbjct: 41 ECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF-MKSAISIA 99
Query: 197 DGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
+ E W+ R + P + M+ + + D L + L A G+ ++ +F ++
Sbjct: 100 EDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSM 159
Query: 257 DVIGKAVFNYDFDSLTNDTG-IVEAVYTVLR-EAEDRSVAPIPVWE--IPIW-------- 304
DVI F + DSL N VE +LR + D I V+ IPI
Sbjct: 160 DVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVF 219
Query: 305 -KDISPRLKKVNAALK--LINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLA 361
++++ L+K +K + DT + + M+D + + E
Sbjct: 220 PREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETE---------------- 263
Query: 362 SGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLS-----------KVDSILGDRFPT 410
S +S +L + + AG+ET+++VL++ Y L+ ++D++L ++ P
Sbjct: 264 SHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP 323
Query: 411 IGD-MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSP 469
D + +++Y V+NE+LRL+P L R +D + I +G + I + LHR P
Sbjct: 324 TYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDP 383
Query: 470 HIWDDADKFNPERWPLDGPNPNETNQD-YCYLPFGGGPRKCVGDMFATFENIVAVAMLVR 528
W + +KF PER+ N+ N D Y Y PFG GPR C+G FA +A+ +++
Sbjct: 384 KYWTEPEKFLPERF----SKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQ 439
Query: 529 QFNFQ 533
F+F+
Sbjct: 440 NFSFK 444
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 191/425 (44%), Gaps = 50/425 (11%)
Query: 138 ELYLTYGGIFRLTFGPKSFLIVSDPSMAKHIL-KDNSKGYSKGILAEILEFVMGKGLIPA 196
E + YG ++ G + L ++DP M K +L K+ ++ + F M + A
Sbjct: 42 ECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF-MKSAISIA 100
Query: 197 DGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
+ E W+ R + P + M+ + + D L + L A G+ ++ +F ++
Sbjct: 101 EDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSM 160
Query: 257 DVIGKAVFNYDFDSLTNDTG-IVEAVYTVLR-EAEDRSVAPIPVWE--IPIW-------- 304
DVI F + DSL N VE +LR + D I V+ IPI
Sbjct: 161 DVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVF 220
Query: 305 -KDISPRLKKVNAALK--LINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLA 361
++++ L+K +K + DT + + M+D + + E
Sbjct: 221 PREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETE---------------- 264
Query: 362 SGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLS-----------KVDSILGDRFPT 410
S +S +L + + AG+ET+++VL++ Y L+ ++D++L ++ P
Sbjct: 265 SHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP 324
Query: 411 IGD-MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSP 469
D + +++Y V+NE+LRL+P L R +D + I +G + I + LHR P
Sbjct: 325 TYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDP 384
Query: 470 HIWDDADKFNPERWPLDGPNPNETNQD-YCYLPFGGGPRKCVGDMFATFENIVAVAMLVR 528
W + +KF PER+ N+ N D Y Y PFG GPR C+G FA +A+ +++
Sbjct: 385 KYWTEPEKFLPERF----SKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQ 440
Query: 529 QFNFQ 533
F+F+
Sbjct: 441 NFSFK 445
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 191/425 (44%), Gaps = 50/425 (11%)
Query: 138 ELYLTYGGIFRLTFGPKSFLIVSDPSMAKHIL-KDNSKGYSKGILAEILEFVMGKGLIPA 196
E + YG ++ G + L ++DP M K +L K+ ++ + F M + A
Sbjct: 43 ECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF-MKSAISIA 101
Query: 197 DGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
+ E W+ R + P + M+ + + D L + L A G+ ++ +F ++
Sbjct: 102 EDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSM 161
Query: 257 DVIGKAVFNYDFDSLTNDTG-IVEAVYTVLR-EAEDRSVAPIPVWE--IPIW-------- 304
DVI F + DSL N VE +LR + D I V+ IPI
Sbjct: 162 DVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVF 221
Query: 305 -KDISPRLKKVNAALK--LINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLA 361
++++ L+K +K + DT + + M+D + + E
Sbjct: 222 PREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETE---------------- 265
Query: 362 SGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLS-----------KVDSILGDRFPT 410
S +S +L + + AG+ET+++VL++ Y L+ ++D++L ++ P
Sbjct: 266 SHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP 325
Query: 411 IGD-MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSP 469
D + +++Y V+NE+LRL+P L R +D + I +G + I + LHR P
Sbjct: 326 TYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDP 385
Query: 470 HIWDDADKFNPERWPLDGPNPNETNQD-YCYLPFGGGPRKCVGDMFATFENIVAVAMLVR 528
W + +KF PER+ N+ N D Y Y PFG GPR C+G FA +A+ +++
Sbjct: 386 KYWTEPEKFLPERF----SKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQ 441
Query: 529 QFNFQ 533
F+F+
Sbjct: 442 NFSFK 446
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 185/413 (44%), Gaps = 36/413 (8%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHIL-----KDNSKGYSKGILAEILEFVMGKGLIP-A 196
YG + R+ K+ +IV+ P K L +SK Y + + E + G+GL+
Sbjct: 23 YGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMY-RALQTVFGERLFGQGLVSEC 81
Query: 197 DGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
+ E W +RR I A + + ++++ F + ++L + L+ A M+ + + +
Sbjct: 82 NYERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAM 141
Query: 257 DVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNA 316
D++ KA F + L + ++ E S + + +P + +L++V
Sbjct: 142 DILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKF-LPGKRK---QLREVRE 197
Query: 317 ALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLM 376
+++ + D + + E L+ EE + IL + DD + L D+ +
Sbjct: 198 SIRFLRQVGRDWVQRRR-----EALKRGEEVPADILTQILKAEEGAQDD---EGLLDNFV 249
Query: 377 TMLIAGHETSAAVLTWTFYLLSK-----------VDSILGD-RFPTIGDMKKLKYTARVI 424
T IAGHETSA L +T LS+ VD ++G R+ D+ +L+Y ++V+
Sbjct: 250 TFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVL 309
Query: 425 NESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWP 484
ESLRLYP R E+ ++ + + S + + R ++D FNP+R+
Sbjct: 310 KESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFG 369
Query: 485 LDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALG 537
P P + Y PF G R C+G FA E V +A L+++ F++ G
Sbjct: 370 PGAPKPR-----FTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPG 417
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 196/442 (44%), Gaps = 47/442 (10%)
Query: 142 TYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMG---KGLIPADG 198
YG R+ + LI+S S HI+K N YS +++ +G KG+I +
Sbjct: 80 VYGEFMRVWISGEETLIISKSSSMFHIMKHNH--YSSRFGSKLGLQCIGMHEKGIIFNNN 137
Query: 199 -EIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLD 257
E+W+ R + AL + M+ + ++ +L+ +E ++ +L R+ LD
Sbjct: 138 PELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLD 197
Query: 258 VIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAA 317
D ++ IV + + + P I+ IS KK +
Sbjct: 198 TSNTLFLRIPLD----ESAIVVKIQGYFDAWQALLIKP------DIFFKISWLYKKYEKS 247
Query: 318 LKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMT 377
+K + D ++ LIA +R + EE EE M+ IL D++ + + ++
Sbjct: 248 VKDLKDAIEVLIAEKRRRISTEEKL--EECMDFATELILA---EKRGDLTRENVNQCILE 302
Query: 378 MLIAGHETSAAVLTWTFYLLSK-----------VDSILGDRFPTIGDMKKLKYTARVINE 426
MLIA +T + L + +L++K + +++G+R I D++KLK I E
Sbjct: 303 MLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKIDDIQKLKVMENFIYE 362
Query: 427 SLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLD 486
S+R P +++R++LEDDV+ YP+K+G +I +++ +HR + ++F E + +
Sbjct: 363 SMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFAKN 421
Query: 487 GPNPNETNQDYCYL-PFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALG--APQVEM 543
P Y Y PFG GPR C G A + L+R+F+ + G ++
Sbjct: 422 VP--------YRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQK 473
Query: 544 TTGATIH---TTNGLRMTVTRR 562
++H T N L M T R
Sbjct: 474 IHDLSLHPDETKNMLEMIFTPR 495
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 183/440 (41%), Gaps = 62/440 (14%)
Query: 136 LYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGK---- 191
L E + YG IFR+ G + + PS+ + + + S + + + +
Sbjct: 54 LAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTESAHPQRLEIKPWKAYRDHRNEAY 113
Query: 192 GLIPADGEIWRVRRRAIVPALHQ--------KYVAAMIDLFGKATDRLCKKLDTAASEGE 243
GL+ +G+ W+ R A L + K + ++ F + D LC + G
Sbjct: 114 GLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDE------RGR 167
Query: 244 DAEMESLFSRLTLDVIGKAVFNYDFDSLTNDT-----GIVEAVYTVLREAEDRSVAPIPV 298
++ S ++ + + I ++ F L +T + A+ T++ V P+
Sbjct: 168 IPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPV-- 225
Query: 299 WEIPIWKDISPRLK-KVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILH 357
++ RL KV A L DT+ + C +D ++ Q P
Sbjct: 226 -------ELHKRLNTKVWQAHTLAWDTIFKSVKPC---IDNRLQRY------SQQPGA-D 268
Query: 358 FL--LASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFY-----------LLSKVDSIL 404
FL + D +S K+L + + +A ET+A L W Y LL +V S+L
Sbjct: 269 FLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVL 328
Query: 405 GD-RFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVW 463
D + P D++ + Y + ES+RL P P R + VLG+Y + +G + ++
Sbjct: 329 PDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQ 388
Query: 464 NLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAV 523
L S ++D+ KF PERW N + +LPFG G R C+G A + +A+
Sbjct: 389 VLGSSEDNFEDSHKFRPERWLQKEKKIN----PFAHLPFGIGKRMCIGRRLAELQLHLAL 444
Query: 524 AMLVRQFNFQMALGAPQVEM 543
++++++ P VEM
Sbjct: 445 CWIIQKYDIVATDNEP-VEM 463
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 112/230 (48%), Gaps = 23/230 (10%)
Query: 349 NEQDPS---ILHFLLASGDD----VSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVD 401
+Q PS L LLA+ DD +S +L+D ++ +L AGHET + L+ +F LL
Sbjct: 215 QQQPPSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALS-SFCLLLGQH 273
Query: 402 SILGDRFP------------TIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGK 449
S + +R T +KK+ Y +V+ E LRL P R ++D
Sbjct: 274 SDIRERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQG 333
Query: 450 YPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKC 509
+ +G + + H P ++ D +KF+PER+ DG + N + ++PFGGG R+C
Sbjct: 334 FHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATH--NPPFAHVPFGGGLREC 391
Query: 510 VGDMFATFENIVAVAMLVRQFNFQMALGAPQVEMTTGATIHTTNGLRMTV 559
+G FA E + L++QF++ + G +E+ + + LR+ +
Sbjct: 392 LGKEFARLEMKLFATRLIQQFDWTLLPGQ-NLELVVTPSPRPKDNLRVKL 440
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 176/439 (40%), Gaps = 42/439 (9%)
Query: 140 YLTYGGIFRLTFGPKSFLIVSDPSMAKHILKD-NSKGYSKGILAEILEFVMGKGL-IPAD 197
Y YG +F T K+F + A + N ++ + + + V GKG+
Sbjct: 41 YEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVP 100
Query: 198 GEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLD 257
++ +++ + L+ + + + K T ++ GE E+L S L +
Sbjct: 101 NPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEY---FESWGESGEKNVFEAL-SELIIL 156
Query: 258 VIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAA 317
+ + S N+ V +Y L + W +P W + P ++ + A
Sbjct: 157 TASHCLHGKEIRSQLNEK--VAQLYADLDGGFSHAA-----WLLPGWLPL-PSFRRRDRA 208
Query: 318 LKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMT 377
+ I D AI KR +E++ ++ ++L G ++ ++ L+
Sbjct: 209 HREIKDIFYK--AIQKRRQSQEKI-------DDILQTLLDATYKDGRPLTDDEVAGMLIG 259
Query: 378 MLIAGHETSAAVLTWTFYLLSK-----------VDSILGDRFP--TIGDMKKLKYTARVI 424
+L+AG TS+ W + L++ ++ G+ P T +K L R I
Sbjct: 260 LLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCI 319
Query: 425 NESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWP 484
E+LRL P +++R + + Y I G + +S R W + FNP+R+
Sbjct: 320 KETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYL 379
Query: 485 LDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALGA-PQVEM 543
D P E + Y+PFG G +C+G+ FA + + ++R + F + G P V
Sbjct: 380 QDNPASGE---KFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNY 436
Query: 544 TTGATIHTTNGLRMTVTRR 562
TT IHT + RR
Sbjct: 437 TT--MIHTPENPVIRYKRR 453
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/432 (20%), Positives = 179/432 (41%), Gaps = 52/432 (12%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPADGEIW 201
YG +F + GP+ +++ + L D ++ +S +G +A + F G G+I A+G W
Sbjct: 43 YGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRW 102
Query: 202 RVRRRAIVPALH-----QKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
+V RR V + ++ V I + C + S+G + LF +T
Sbjct: 103 KVLRRFSVTTMRDFGMGKRSVEERIQ-----EEAQCLIEELRKSKGALMDPTFLFQSITA 157
Query: 257 DVIGKAVFNYDF-----------DSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWK 305
++I VF F + ++ +V+ L E + P ++K
Sbjct: 158 NIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKHFPGAHRQVYK 217
Query: 306 DISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDD 365
++ + +++ +TLD + + ++D L +E N + +
Sbjct: 218 NLQEINAYIGHSVEKHRETLDP--SAPRDLIDTYLLHMEKEKSN------------AHSE 263
Query: 366 VSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK-----------VDSILG-DRFPTIGD 413
S + L + +++ AG ET++ L + F L+ K ++ ++G R P + D
Sbjct: 264 FSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHD 323
Query: 414 MKKLKYTARVINESLRLYPQPPVLIRRSL-EDDVLGKYPIKRGEDIFISVWNLHRSPHIW 472
K+ YT VI E R P+ + + + Y I + ++F+ + PH +
Sbjct: 324 RAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYF 383
Query: 473 DDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNF 532
+ D FNP+ + LD + + ++PF G R C+G+ A E + +++ F+
Sbjct: 384 EKPDAFNPDHF-LDANGALKKTE--AFIPFSLGKRICLGEGIARAELFLFFTTILQNFSM 440
Query: 533 QMALGAPQVEMT 544
+ +++T
Sbjct: 441 ASPVAPEDIDLT 452
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 186/453 (41%), Gaps = 65/453 (14%)
Query: 134 LPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHIL---KDNSKGYSKGILAEILEFVMG 190
L L + YG + ++ G L++S + L D+ KG + ++
Sbjct: 39 LALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQS 98
Query: 191 KGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESL 250
G +W RRR AL+ +A+ A+ C E E ++L
Sbjct: 99 LTFSTDSGPVWAARRRLAQNALNTFSIAS-----DPASSSSC-----YLEEHVSKEAKAL 148
Query: 251 FSRL-------------------TLDVIGKAVFNYDFDSLTNDT-GIVEAVYTVLREAED 290
SRL +VIG F F +++ +V+ + + A
Sbjct: 149 ISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETAS- 207
Query: 291 RSVAPIPVWEIPIWKDISPRLKKV-NAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
S P+ D P L+ + N AL+ + ++ V E F + +
Sbjct: 208 -SGNPL---------DFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQDFDKNSVR 257
Query: 350 EQDPSILHFL----LASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTF-YLLSK----- 399
+ ++ ASG+ + +++ + + + AG +T ++W+ YL++K
Sbjct: 258 DITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQR 317
Query: 400 -----VDSILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSL-EDDVLGKYPI 452
+D+++G +R P + D +L Y I E+ R P I S D L + I
Sbjct: 318 KIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYI 377
Query: 453 KRGEDIFISVWNLHRSPHIWDDADKFNPERW-PLDGPNPNETNQDYCYLPFGGGPRKCVG 511
+ +F++ W ++ P +W+D +F PER+ DG N+ + L FG G R+C+G
Sbjct: 378 PKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMML-FGMGKRRCIG 436
Query: 512 DMFATFENIVAVAMLVRQFNFQMALGAPQVEMT 544
++ A +E + +A+L++Q F + G +V++T
Sbjct: 437 EVLAKWEIFLFLAILLQQLEFSVPPGV-KVDLT 468
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 176/444 (39%), Gaps = 46/444 (10%)
Query: 134 LPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHIL---KDNSKGYSKGILAEILEFVMG 190
L L + YG + ++ G +++S + L D+ KG ++
Sbjct: 34 LALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYTFTLISNGQS 93
Query: 191 KGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESL 250
P G +W RRR L +A+ A+ C E E E L
Sbjct: 94 MSFSPDSGPVWAARRRLAQNGLKSFSIAS-----DPASSTSC-----YLEEHVSKEAEVL 143
Query: 251 FSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIW------ 304
S L + G FN + + T ++ A+ R + V +
Sbjct: 144 ISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQELLSLVNLNNNFGEVVGS 203
Query: 305 ---KDISPRLKKV-NAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNE-QDPSILHFL 359
D P L+ + N +L D + + ++MV E F + ++ + D I H
Sbjct: 204 GNPADFIPILRYLPNPSLNAFKDLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQ 263
Query: 360 LASGDDVSSKQLRDD-----LMTMLIAGHETSAAVLTWTFYLL-----------SKVDSI 403
D+ ++ QL D+ ++ + AG +T ++W+ L ++D++
Sbjct: 264 EKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTV 323
Query: 404 LG-DRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFIS 461
+G R P + D L Y I E+ R P I S D L + I +G +F++
Sbjct: 324 IGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVN 383
Query: 462 VWNLHRSPHIWDDADKFNPERWPL-DGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENI 520
W ++ +W + +F PER+ DG ++ + FG G RKC+G+ A +E
Sbjct: 384 QWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKV--IIFGMGKRKCIGETIARWEVF 441
Query: 521 VAVAMLVRQFNFQMALGAPQVEMT 544
+ +A+L+++ F + LG +V+MT
Sbjct: 442 LFLAILLQRVEFSVPLGV-KVDMT 464
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 182/434 (41%), Gaps = 56/434 (12%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPADGEIW 201
YG +F + G + +++ + L D ++ +S +G +A + G G+I A+GE W
Sbjct: 43 YGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERW 102
Query: 202 RVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA---------SEGEDAEMESLFS 252
R RR + A + FG + +++ A S+G + LF
Sbjct: 103 RALRR---------FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFH 153
Query: 253 RLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLK 312
+T ++I VF FD + V+ L + +S + I + +++ S LK
Sbjct: 154 SITSNIICSIVFGKRFD-------YKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLK 206
Query: 313 KVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLASGDDVS--- 367
+ I L ++ + V++ H ++ +P I +LL D S
Sbjct: 207 HFPGTHRQIYRNLQEINTFIGQSVEK-----HRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 368 ----SKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK-----------VDSILGD-RFPTI 411
+ L ++++ AG ET++ L + F L+ K ++ ++G R P +
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 412 GDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGK-YPIKRGEDIFISVWNLHRSPH 470
D K+ YT VI+E RL P + ++ D + Y I + ++F + + P
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPR 381
Query: 471 IWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQF 530
++ + FNP + LD + N+ ++PF G R C+G+ A E + +++ F
Sbjct: 382 YFETPNTFNPGHF-LDANGALKRNEG--FMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
Query: 531 NFQMALGAPQVEMT 544
+ + +++T
Sbjct: 439 SIASPVPPEDIDLT 452
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 182/434 (41%), Gaps = 56/434 (12%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPADGEIW 201
YG +F + G + +++ + L D ++ +S +G +A + G G+I A+GE W
Sbjct: 43 YGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERW 102
Query: 202 RVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA---------SEGEDAEMESLFS 252
R RR + A + FG + +++ A S+G + LF
Sbjct: 103 RALRR---------FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFH 153
Query: 253 RLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLK 312
+T ++I VF FD + V+ L + +S + I + +++ S LK
Sbjct: 154 SITSNIICSIVFGKRFD-------YKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLK 206
Query: 313 KVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLASGDDVS--- 367
+ I L ++ + V++ H ++ +P I +LL D S
Sbjct: 207 YFPGTHRQIYRNLQEINTFIGQSVEK-----HRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 368 ----SKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK-----------VDSILGD-RFPTI 411
+ L ++++ AG ET++ L + F L+ K ++ ++G R P +
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 412 GDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGK-YPIKRGEDIFISVWNLHRSPH 470
D K+ YT VI+E RL P + ++ D + Y I + ++F + + P
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPR 381
Query: 471 IWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQF 530
++ + FNP + LD + N+ ++PF G R C+G+ A E + +++ F
Sbjct: 382 YFETPNTFNPGHF-LDANGALKRNEG--FMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
Query: 531 NFQMALGAPQVEMT 544
+ + +++T
Sbjct: 439 SIASPVPPEDIDLT 452
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/446 (20%), Positives = 180/446 (40%), Gaps = 60/446 (13%)
Query: 122 GAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGI 180
G + +E + L ++ YG +F + GP+ +++ K L D ++ +S +G
Sbjct: 22 GNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEEFSGRGE 81
Query: 181 LAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA- 239
A G G+ ++GE + RR + A + FG + +++ A
Sbjct: 82 QATFDWLFKGYGVAFSNGERAKQLRR---------FSIATLRGFGVGKRGIEERIQEEAG 132
Query: 240 --------SEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDR 291
+ G + + SR +VI VF FD D + + +L +
Sbjct: 133 FLIDALRGTHGANIDPTFFLSRTVSNVISSIVFGDRFD--YEDKEFLSLLRMMLGSFQFT 190
Query: 292 SVAPIPVWEI--PIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEE--------- 340
+ + ++E+ + K + ++ L+ + D + + +R +D
Sbjct: 191 ATSTGQLYEMFSSVMKHLPGPQQQAFKELQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFL 250
Query: 341 LQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK- 399
++ EE E++P+ +L K L + + AG ET + L + F LL K
Sbjct: 251 IRMQEE---EKNPNTEFYL---------KNLVMTTLNLFFAGTETVSTTLRYGFLLLMKH 298
Query: 400 ----------VDSILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPV-LIRRSLEDDVL 447
+D ++G +R P D K+ YT VI+E R P+ L R +D
Sbjct: 299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKF 358
Query: 448 GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPR 507
+ + +G ++F + ++ R P + + FNP+ + LD + + ++PF G R
Sbjct: 359 RDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHF-LD--KKGQFKKSDAFVPFSIGKR 415
Query: 508 KCVGDMFATFENIVAVAMLVRQFNFQ 533
C G+ A E + +++ F F+
Sbjct: 416 YCFGEGLARMELFLFFTTIMQNFRFK 441
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 182/434 (41%), Gaps = 56/434 (12%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPADGEIW 201
YG +F + G + +++ + L D ++ +S +G +A + G G+I A+GE W
Sbjct: 43 YGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERW 102
Query: 202 RVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA---------SEGEDAEMESLFS 252
R RR + A + FG + +++ A S+G + LF
Sbjct: 103 RALRR---------FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFH 153
Query: 253 RLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLK 312
+T ++I VF FD + V+ L + +S + I + +++ S LK
Sbjct: 154 SITSNIICSIVFGKRFD-------YKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLK 206
Query: 313 KVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLASGDDVSS-- 368
+ I L ++ + V++ H ++ +P I +LL D S
Sbjct: 207 YFPGTHRQIYRNLQEINTFIGQSVEK-----HRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 369 -----KQLRDDLMTMLIAGHETSAAVLTWTFYLLSK-----------VDSILGD-RFPTI 411
+ L ++++ AG ET++ L + F L+ K ++ ++G R P +
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 412 GDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGK-YPIKRGEDIFISVWNLHRSPH 470
D K+ YT VI+E RL P + ++ D + Y I + ++F + + P
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPR 381
Query: 471 IWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQF 530
++ + FNP + LD + N+ ++PF G R C+G+ A E + +++ F
Sbjct: 382 YFETPNTFNPGHF-LDANGALKRNEG--FMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
Query: 531 NFQMALGAPQVEMT 544
+ + +++T
Sbjct: 439 SIASPVPPEDIDLT 452
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 181/434 (41%), Gaps = 56/434 (12%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPADGEIW 201
YG +F + G + +++ + L D ++ +S +G +A + G G+I A+GE W
Sbjct: 43 YGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERW 102
Query: 202 RVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA---------SEGEDAEMESLFS 252
R RR + A + FG + +++ A S+G + LF
Sbjct: 103 RALRR---------FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFH 153
Query: 253 RLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLK 312
+T ++I VF FD + V+ L + +S + I + +++ S LK
Sbjct: 154 SITSNIICSIVFGKRFD-------YKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLK 206
Query: 313 KVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLASGDDVS--- 367
+ I L ++ + V++ H ++ +P I +LL D S
Sbjct: 207 YFPGTHRQIYRNLQEINTFIGQSVEK-----HRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 368 ----SKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK-----------VDSILGD-RFPTI 411
+ L ++++ AG ET++ L + F L+ K ++ ++G R P +
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 412 GDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGK-YPIKRGEDIFISVWNLHRSPH 470
D K+ YT VI+E RL P + ++ D + Y I + ++F + + P
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPR 381
Query: 471 IWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQF 530
++ + FNP + LD + N+ ++PF G R C G+ A E + +++ F
Sbjct: 382 YFETPNTFNPGHF-LDANGALKRNEG--FMPFSLGKRICAGEGIARTELFLFFTTILQNF 438
Query: 531 NFQMALGAPQVEMT 544
+ + +++T
Sbjct: 439 SIASPVPPEDIDLT 452
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 182/434 (41%), Gaps = 56/434 (12%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPADGEIW 201
YG +F + G + +++ + L D ++ +S +G +A + G G+I A+GE W
Sbjct: 43 YGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERW 102
Query: 202 RVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA---------SEGEDAEMESLFS 252
R RR + A + FG + +++ A S+G + LF
Sbjct: 103 RALRR---------FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFH 153
Query: 253 RLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLK 312
+T ++I VF FD + V+ L + +S + I + +++ S LK
Sbjct: 154 SITSNIICSIVFGKRFD-------YKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLK 206
Query: 313 KVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLASGDDVSS-- 368
+ I L ++ + V++ H ++ +P I +LL D S
Sbjct: 207 YFPGTHRQIYRNLQEINTFIGQSVEK-----HRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 369 -----KQLRDDLMTMLIAGHETSAAVLTWTFYLLSK-----------VDSILGD-RFPTI 411
+ L ++++ AG ET++ L + F L+ K ++ ++G R P +
Sbjct: 262 SEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 412 GDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGK-YPIKRGEDIFISVWNLHRSPH 470
D K+ YT VI+E RL P + ++ D + Y I + ++F + + P
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPR 381
Query: 471 IWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQF 530
++ + FNP + LD + N+ ++PF G R C+G+ A E + +++ F
Sbjct: 382 YFETPNTFNPGHF-LDANGALKRNEG--FMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
Query: 531 NFQMALGAPQVEMT 544
+ + +++T
Sbjct: 439 SIASPVPPEDIDLT 452
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 14/181 (7%)
Query: 367 SSKQLRDDLMTMLIAGHETSAAVLTWTFY-----------LLSKVDSILGD-RFPTIGDM 414
S+ ++ ++M+ AGH TS+ +WT ++ ++D + GD R + +
Sbjct: 242 SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHAL 301
Query: 415 KKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDD 474
+++ V+ E+LRL+P +L+R + + + + I G+ + S +R P + D
Sbjct: 302 RQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPD 361
Query: 475 ADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQM 534
F P R+ + P + + ++PFG G +CVG FA + ++L+R++ F+M
Sbjct: 362 PHDFVPARY--EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
Query: 535 A 535
A
Sbjct: 420 A 420
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 14/181 (7%)
Query: 367 SSKQLRDDLMTMLIAGHETSAAVLTWTFY-----------LLSKVDSILGD-RFPTIGDM 414
S+ ++ ++M+ AGH TS+ +WT ++ ++D + GD R + +
Sbjct: 242 SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHAL 301
Query: 415 KKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDD 474
+++ V+ E+LRL+P +L+R + + + + I G+ + S +R P + D
Sbjct: 302 RQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPD 361
Query: 475 ADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQM 534
F P R+ + P + + ++PFG G +CVG FA + ++L+R++ F+M
Sbjct: 362 PHDFVPARY--EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
Query: 535 A 535
A
Sbjct: 420 A 420
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 14/181 (7%)
Query: 367 SSKQLRDDLMTMLIAGHETSAAVLTWTFY-----------LLSKVDSILGD-RFPTIGDM 414
S+ ++ ++M+ AGH TS+ +WT ++ ++D + GD R + +
Sbjct: 242 SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHAL 301
Query: 415 KKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDD 474
+++ V+ E+LRL+P +L+R + + + + I G+ + S +R P + D
Sbjct: 302 RQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPD 361
Query: 475 ADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQM 534
F P R+ + P + + ++PFG G +CVG FA + ++L+R++ F+M
Sbjct: 362 PHDFVPARY--EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
Query: 535 A 535
A
Sbjct: 420 A 420
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 14/181 (7%)
Query: 367 SSKQLRDDLMTMLIAGHETSAAVLTWTFY-----------LLSKVDSILGD-RFPTIGDM 414
S+ ++ ++M+ AGH TS+ +WT ++ ++D + GD R + +
Sbjct: 242 SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHAL 301
Query: 415 KKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDD 474
+++ V+ E+LRL+P +L+R + + + + I G+ + S +R P + D
Sbjct: 302 RQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPD 361
Query: 475 ADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQM 534
F P R+ + P + + ++PFG G +CVG FA + ++L+R++ F+M
Sbjct: 362 PHDFVPARY--EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
Query: 535 A 535
A
Sbjct: 420 A 420
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 173/419 (41%), Gaps = 43/419 (10%)
Query: 142 TYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPAD-GE 199
YG IF L G S ++++ + K L S+ ++ + L ++ GL+ + G
Sbjct: 46 VYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNSRYGR 105
Query: 200 IWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTA--ASEGEDAEMESLFSRLTLD 257
W RR V + +Y F K + A +G + + L + +
Sbjct: 106 GWVDHRRLAVNSF--RYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSN 163
Query: 258 VIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISP--RLKKVN 315
+ +F F DT + E + A + ++ W I P + +++
Sbjct: 164 ITNLIIFGERFT--YEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLF 221
Query: 316 AALKLINDTLDDLIAICKRMVDEEEL---QFHEEYMNEQDPSILHFLLASGDDVSSKQLR 372
++ D L LI K V+ + F + Y++E D +D SS +
Sbjct: 222 RNAAVVYDFLSRLIE--KASVNRKPQLPQHFVDAYLDEMD--------QGKNDPSSTFSK 271
Query: 373 DDLM----TMLIAGHETSAAVLTWTFYLLS-----------KVDSILG-DRFPTIGDMKK 416
++L+ ++IAG ET+ VL W ++ ++D I+G + P+ D K
Sbjct: 272 ENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCK 331
Query: 417 LKYTARVINESLRLYPQPPV-LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDA 475
+ YT V++E LR P+ + + ED V+ Y I +G + +++++H W D
Sbjct: 332 MPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDP 391
Query: 476 DKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQM 534
+ F+PER+ LD + +PF G R C+G+ A E + L+++F+
Sbjct: 392 EVFHPERF-LDSSGYFAKKE--ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHF 447
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 173/419 (41%), Gaps = 43/419 (10%)
Query: 142 TYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPAD-GE 199
YG IF L G S ++++ + K L S+ ++ + L ++ GL+ + G
Sbjct: 46 VYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNSRYGR 105
Query: 200 IWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTA--ASEGEDAEMESLFSRLTLD 257
W RR V + +Y F K + A +G + + L + +
Sbjct: 106 GWVDHRRLAVNSF--RYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSN 163
Query: 258 VIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISP--RLKKVN 315
+ +F F DT + E + A + ++ W I P + +++
Sbjct: 164 ITNLIIFGERFT--YEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLF 221
Query: 316 AALKLINDTLDDLIAICKRMVDEEEL---QFHEEYMNEQDPSILHFLLASGDDVSSKQLR 372
++ D L LI K V+ + F + Y++E D +D SS +
Sbjct: 222 RNAAVVYDFLSRLIE--KASVNRKPQLPQHFVDAYLDEMD--------QGKNDPSSTFSK 271
Query: 373 DDLM----TMLIAGHETSAAVLTWTFYLLS-----------KVDSILG-DRFPTIGDMKK 416
++L+ ++IAG ET+ VL W ++ ++D I+G + P+ D K
Sbjct: 272 ENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCK 331
Query: 417 LKYTARVINESLRLYPQPPV-LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDA 475
+ YT V++E LR P+ + + ED V+ Y I +G + +++++H W D
Sbjct: 332 MPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDP 391
Query: 476 DKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQM 534
+ F+PER+ LD + +PF G R C+G+ A E + L+++F+
Sbjct: 392 EVFHPERF-LDSSGYFAKKE--ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHF 447
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/449 (20%), Positives = 178/449 (39%), Gaps = 66/449 (14%)
Query: 122 GAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGI 180
G + +E + L ++ YG +F + GP+ +++ + L D ++ +S +G
Sbjct: 22 GNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGE 81
Query: 181 LAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA- 239
A G G++ ++GE + RR + L FG + +++ A
Sbjct: 82 QATFDWVFKGYGVVFSNGERAKQLRRFSIATLRD---------FGVGKRGIEERIQEEAG 132
Query: 240 --------SEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDR 291
+ G + + SR +VI VF FD D + + +L +
Sbjct: 133 FLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFD--YKDKEFLSLLRMMLGSFQFT 190
Query: 292 SVAPIPVWEI--PIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEE--------- 340
S + ++E+ + K + ++ L+ + D + + +R +D
Sbjct: 191 STSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFL 250
Query: 341 LQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK- 399
++ EE E++P+ +L K L + + AG ET + L + F LL K
Sbjct: 251 IRMQEE---EKNPNTEFYL---------KNLVMTTLNLFFAGTETVSTTLRYGFLLLMKH 298
Query: 400 ----------VDSILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPV-LIRRSLEDDVL 447
+D ++G +R P D K+ Y VI+E R P+ L RR +D
Sbjct: 299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKF 358
Query: 448 GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQ---DYCYLPFGG 504
+ + +G +++ + ++ R P + + FNP+ + NE Q ++PF
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF------LNEKGQFKKSDAFVPFSI 412
Query: 505 GPRKCVGDMFATFENIVAVAMLVRQFNFQ 533
G R C G+ A E + +++ F +
Sbjct: 413 GKRNCFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 91/449 (20%), Positives = 178/449 (39%), Gaps = 66/449 (14%)
Query: 122 GAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGI 180
G + +E + L ++ YG +F + GP+ +++ + L D ++ +S +G
Sbjct: 22 GNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGE 81
Query: 181 LAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA- 239
A G G++ ++GE + RR + L FG + +++ A
Sbjct: 82 QATFDWVFKGYGVVFSNGERAKQLRRFSIATLRD---------FGVGKRGIEERIQEEAG 132
Query: 240 --------SEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDR 291
+ G + + SR +VI VF FD D + + +L +
Sbjct: 133 FLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFD--YKDKEFLSLLRMMLGIFQFT 190
Query: 292 SVAPIPVWEI--PIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEE--------- 340
S + ++E+ + K + ++ L+ + D + + +R +D
Sbjct: 191 STSTGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFL 250
Query: 341 LQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK- 399
++ EE E++P+ +L K L + + I G ET + L + F LL K
Sbjct: 251 IRMQEE---EKNPNTEFYL---------KNLVMTTLQLFIGGTETVSTTLRYGFLLLMKH 298
Query: 400 ----------VDSILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPV-LIRRSLEDDVL 447
+D ++G +R P D K+ Y VI+E R P+ L RR +D
Sbjct: 299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF 358
Query: 448 GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQ---DYCYLPFGG 504
+ + +G +++ + ++ R P + + FNP+ + NE Q ++PF
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF------LNEKGQFKKSDAFVPFSI 412
Query: 505 GPRKCVGDMFATFENIVAVAMLVRQFNFQ 533
G R C G+ A E + +++ F +
Sbjct: 413 GKRNCFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 91/449 (20%), Positives = 178/449 (39%), Gaps = 66/449 (14%)
Query: 122 GAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGI 180
G + +E + L ++ YG +F + GP+ +++ + L D ++ +S +G
Sbjct: 22 GNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGE 81
Query: 181 LAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA- 239
A G G++ ++GE + RR + L FG + +++ A
Sbjct: 82 QATFDWVFKGYGVVFSNGERAKQLRRFSIATLRD---------FGVGKRGIEERIQEEAG 132
Query: 240 --------SEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDR 291
+ G + + SR +VI VF FD D + + +L +
Sbjct: 133 FLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFD--YKDKEFLSLLRMMLGIFQFT 190
Query: 292 SVAPIPVWEI--PIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEE--------- 340
S + ++E+ + K + ++ L+ + D + + +R +D
Sbjct: 191 STSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFL 250
Query: 341 LQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK- 399
++ EE E++P+ +L K L + + I G ET + L + F LL K
Sbjct: 251 IRMQEE---EKNPNTEFYL---------KNLVMTTLQLFIGGTETVSTTLRYGFLLLMKH 298
Query: 400 ----------VDSILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPV-LIRRSLEDDVL 447
+D ++G +R P D K+ Y VI+E R P+ L RR +D
Sbjct: 299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF 358
Query: 448 GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQ---DYCYLPFGG 504
+ + +G +++ + ++ R P + + FNP+ + NE Q ++PF
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF------LNEKGQFKKSDAFVPFSI 412
Query: 505 GPRKCVGDMFATFENIVAVAMLVRQFNFQ 533
G R C G+ A E + +++ F +
Sbjct: 413 GKRNCFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 91/449 (20%), Positives = 178/449 (39%), Gaps = 66/449 (14%)
Query: 122 GAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGI 180
G + +E + L ++ YG +F + GP+ +++ + L D ++ +S +G
Sbjct: 22 GNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGE 81
Query: 181 LAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA- 239
A G G++ ++GE + RR + L FG + +++ A
Sbjct: 82 QATFDWVFKGYGVVFSNGERAKQLRRFSIATLRD---------FGVGKRGIEERIQEEAG 132
Query: 240 --------SEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDR 291
+ G + + SR +VI VF FD D + + +L +
Sbjct: 133 FLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFD--YKDKEFLSLLRMMLGIFQFT 190
Query: 292 SVAPIPVWEI--PIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEE--------- 340
S + ++E+ + K + ++ L+ + D + + +R +D
Sbjct: 191 STSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFL 250
Query: 341 LQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK- 399
++ EE E++P+ +L K L + + I G ET + L + F LL K
Sbjct: 251 IRMQEE---EKNPNTEFYL---------KNLVMTTLNLFIGGTETVSTTLRYGFLLLMKH 298
Query: 400 ----------VDSILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPV-LIRRSLEDDVL 447
+D ++G +R P D K+ Y VI+E R P+ L RR +D
Sbjct: 299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF 358
Query: 448 GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQ---DYCYLPFGG 504
+ + +G +++ + ++ R P + + FNP+ + NE Q ++PF
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF------LNEKGQFKKSDAFVPFSI 412
Query: 505 GPRKCVGDMFATFENIVAVAMLVRQFNFQ 533
G R C G+ A E + +++ F +
Sbjct: 413 GKRNCFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/449 (20%), Positives = 178/449 (39%), Gaps = 66/449 (14%)
Query: 122 GAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGI 180
G + +E + L ++ YG +F + GP+ +++ + L D ++ +S +G
Sbjct: 22 GNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGE 81
Query: 181 LAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA- 239
A G G++ ++GE + RR + L FG + +++ A
Sbjct: 82 QATFDWVFKGYGVVFSNGERAKQLRRFSIATLRD---------FGVGKRGIEERIQEEAG 132
Query: 240 --------SEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDR 291
+ G + + SR +VI VF FD D + + +L +
Sbjct: 133 FLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFD--YKDKEFLSLLRMMLGIFQFT 190
Query: 292 SVAPIPVWEI--PIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEE--------- 340
S + ++E+ + K + ++ L+ + D + + +R +D
Sbjct: 191 STSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFL 250
Query: 341 LQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK- 399
++ EE E++P+ +L K L + + + G ET + L + F LL K
Sbjct: 251 IRMQEE---EKNPNTEFYL---------KNLVMTTLQLFVGGTETVSTTLRYGFLLLMKH 298
Query: 400 ----------VDSILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPV-LIRRSLEDDVL 447
+D ++G +R P D K+ Y VI+E R P+ L RR +D
Sbjct: 299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF 358
Query: 448 GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQ---DYCYLPFGG 504
+ + +G +++ + ++ R P + + FNP+ + NE Q ++PF
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF------LNEKGQFKKSDAFVPFSI 412
Query: 505 GPRKCVGDMFATFENIVAVAMLVRQFNFQ 533
G R C G+ A E + +++ F +
Sbjct: 413 GKRNCFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 23/165 (13%)
Query: 373 DDLMTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKK-----LKYTARVINES 427
+ +T+L+AGHET A+ LTW+F LLS D +K + E+
Sbjct: 213 SEAVTLLVAGHETVASALTWSFLLLSHRP-----------DWQKRVAESEEAALAAFQEA 261
Query: 428 LRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDG 487
LRLYP +L RR +LG+ + +G + +S + R + + + F PER+ +
Sbjct: 262 LRLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQRL--YFPEGEAFQPERFLAER 319
Query: 488 PNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNF 532
P+ Y PFG G R C+G FA E + + R+F
Sbjct: 320 GTPSGR-----YFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRL 359
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Query: 376 MTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKK-----LKYTARVINESLRL 430
+T+L+AGHET A+ LTW+F LLS D +K + E+LRL
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRP-----------DWQKRVAESEEAALAAFQEALRL 264
Query: 431 YPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNP 490
YP +L RR +LG+ + G + +S + R H D + F PER+ + P
Sbjct: 265 YPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL-HF-PDGEAFRPERFLEERGTP 322
Query: 491 NETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNF 532
+ Y PFG G R C+G FA E + + R+F
Sbjct: 323 SGR-----YFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRL 359
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 17/194 (8%)
Query: 353 PSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKV--------DSIL 404
P IL+ LL S + + + ++ ++ ML G T++ L W Y +++ + +L
Sbjct: 260 PGILYCLLKS-EKMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVL 318
Query: 405 GDRFPTIGDMKKLKYTARV----INESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFI 460
R GD+ K+ + I E+LRL+P L R D VL Y I + +
Sbjct: 319 NARRQAEGDISKMLQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQV 378
Query: 461 SVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENI 520
+++ + R P + DKF+P RW + ++ + L FG G R+CVG A E
Sbjct: 379 AIYAMGRDPAFFSSPDKFDPTRW----LSKDKDLIHFRNLGFGWGVRQCVGRRIAELEMT 434
Query: 521 VAVAMLVRQFNFQM 534
+ + ++ F +M
Sbjct: 435 LFLIHILENFKVEM 448
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 180/434 (41%), Gaps = 42/434 (9%)
Query: 136 LYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLI 194
L L YG +F L FG K +++ K L D + +S +GI G G++
Sbjct: 37 LTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIV 96
Query: 195 PADGEIWRVRRRAIVPALHQKYVA--AMIDLFGKATDRLCKKLDTAASEGEDAEMESLFS 252
++G+ W+ RR + L + ++ D + L ++L + D +
Sbjct: 97 FSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTF--ILG 154
Query: 253 RLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLK 312
+VI +F+ FD + + L E + ++ + I I + SP +
Sbjct: 155 CAPCNVICSIIFHKRFD-------YKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIID 207
Query: 313 KVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLA-------SG 363
++ L +A K + E+++ H+E M+ +P I FL+
Sbjct: 208 YFPGT----HNKLLKNVAFMKSYI-LEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQP 262
Query: 364 DDVSSKQLRDDLMTMLIAGHETSAAVLTW-----------TFYLLSKVDSILG-DRFPTI 411
+ + + L + + + AG ET++ L + T + +++ ++G +R P +
Sbjct: 263 SEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCM 322
Query: 412 GDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPH 470
D + YT V++E R P + ++ D+ Y I +G I IS+ ++
Sbjct: 323 QDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNK 382
Query: 471 IWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQF 530
+ + + F+P + +G N ++ ++PF G R CVG+ A E + + +++ F
Sbjct: 383 EFPNPEMFDPHHFLDEGGNFKKSKY---FMPFSAGKRICVGEALAGMELFLFLTSILQNF 439
Query: 531 NFQMALGAPQVEMT 544
N + + ++ T
Sbjct: 440 NLKSLVDPKNLDTT 453
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 18/197 (9%)
Query: 381 AGHETSAAVLTWTFYLLSK-----------VDSILG-DRFPTIGDMKKLKYTARVINESL 428
A +T + L W L ++ +D ++G DR P +GD L Y + E++
Sbjct: 290 ASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAM 349
Query: 429 RLYPQPPVLIRRSLEDD--VLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLD 486
R PV I + + VLG Y I + +F++ W+++ P W + + F+P R+ LD
Sbjct: 350 RFSSFVPVTIPHATTANTSVLG-YHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARF-LD 407
Query: 487 GPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALGAP-QVEMTT 545
+ + F G R+C+G+ + + + +++L Q +F+ P ++ +
Sbjct: 408 KDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSY 467
Query: 546 GATIHTTNGLRMTVTRR 562
G TI ++ VT R
Sbjct: 468 GLTI-KPKSFKVNVTLR 483
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/430 (19%), Positives = 167/430 (38%), Gaps = 37/430 (8%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWR 202
YGGIF + +V D ++ S + + V G+G+ A
Sbjct: 36 YGGIFTMNICGNRITVVGDVHQHSKFFTPRNEILSPREVYSFMVPVFGEGVAYAAP---Y 92
Query: 203 VRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESL--FSRLTLDVIG 260
R R + L ++ A F + +K A ++ E+ L S + ++
Sbjct: 93 PRMREQLNFLAEELTVAKFQNFAPSIQHEVRKFMKANWNKDEGEINILDDCSAMIINTAC 152
Query: 261 KAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKL 320
+ +F D + + + + + + P V+ I K P+ + A
Sbjct: 153 QCLFGEDLRKRLDARQFAQLLAKM-----ESCLIPAAVFLPWILKLPLPQSYRCRDARAE 207
Query: 321 INDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLI 380
+ D L ++I + E+E + ++ +L + G +S ++ ++ +
Sbjct: 208 LQDILSEII-----IAREKEEAQKDTNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAAMF 262
Query: 381 AGHETSAAVLTWTFYLL---------SKVDSILGDRFPTIGD----MKKLKYTARVINES 427
AG TS TW+ L +K+ + D FP + M+++ + + ES
Sbjct: 263 AGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEI-DEFPAQLNYDNVMEEMPFAEQCARES 321
Query: 428 LRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDG 487
+R P +L+R+ L+ +GKY + G+ I S H+ + + ++NPER
Sbjct: 322 IRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPER----- 376
Query: 488 PNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALGAPQVEMTTGA 547
N D + FG G KC+G+ F + +A ++R ++F++ P+ T
Sbjct: 377 ---NMKLVDGAFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDFELLGPLPEPNYHTMV 433
Query: 548 TIHTTNGLRM 557
T + R+
Sbjct: 434 VGPTASQCRV 443
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 19/196 (9%)
Query: 361 ASGDDVSS---KQLRDDLMTMLIAGHETSAAVLTWTFYLL-----------SKVDSILGD 406
A G+ SS + LR + + AG T++ L W L+ ++D ++G
Sbjct: 260 AKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQ 319
Query: 407 -RFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWN 464
R P +GD + YT VI+E R P+ + D+ + + I +G + ++ +
Sbjct: 320 VRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSS 379
Query: 465 LHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVA 524
+ + +W+ +F+PE + LD + +LPF G R C+G+ A E +
Sbjct: 380 VLKDEAVWEKPFRFHPEHF-LDAQG--HFVKPEAFLPFSAGRRACLGEPLARMELFLFFT 436
Query: 525 MLVRQFNFQMALGAPQ 540
L++ F+F + G P+
Sbjct: 437 SLLQHFSFSVPTGQPR 452
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 19/196 (9%)
Query: 361 ASGDDVSS---KQLRDDLMTMLIAGHETSAAVLTWTFYLL-----------SKVDSILGD 406
A G+ SS + LR + + AG T++ L W L+ ++D ++G
Sbjct: 260 AKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQ 319
Query: 407 -RFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWN 464
R P +GD + YT VI+E R P+ + D+ + + I +G + ++ +
Sbjct: 320 VRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSS 379
Query: 465 LHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVA 524
+ + +W+ +F+PE + LD + +LPF G R C+G+ A E +
Sbjct: 380 VLKDEAVWEKPFRFHPEHF-LDAQG--HFVKPEAFLPFSAGRRACLGEPLARMELFLFFT 436
Query: 525 MLVRQFNFQMALGAPQ 540
L++ F+F + G P+
Sbjct: 437 SLLQHFSFSVPTGQPR 452
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 179/435 (41%), Gaps = 44/435 (10%)
Query: 136 LYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLI 194
L L YG +F L FG K +++ K L D + +S +GI G G++
Sbjct: 35 LTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIV 94
Query: 195 PADGEIWRVRRRAIVPALHQKYVA--AMIDLFGKATDRLCKKLDTAASEGEDAEMESLFS 252
++G+ W+ RR + L + ++ D + L ++L + D +
Sbjct: 95 FSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTF--ILG 152
Query: 253 RLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWE-IPIWKDISPRL 311
+VI +F+ FD D + + + E S I V+ P D P
Sbjct: 153 CAPCNVICSIIFHKRFD--YKDQQFLNLMEKLNENIEILSSPWIQVYNNFPALLDYFPGT 210
Query: 312 KKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLA-------S 362
KL+ + +A K + E+++ H+E M+ +P I FL+
Sbjct: 211 HN-----KLLKN-----VAFMKSYI-LEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQ 259
Query: 363 GDDVSSKQLRDDLMTMLIAGHETSAAVLTW-----------TFYLLSKVDSILG-DRFPT 410
+ + + L + + + AG ET++ L + T + +++ ++G +R P
Sbjct: 260 PSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPC 319
Query: 411 IGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSP 469
+ D + YT V++E R P + ++ D+ Y I +G I IS+ ++
Sbjct: 320 MQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDN 379
Query: 470 HIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQ 529
+ + + F+P + +G N ++ ++PF G R CVG+ A E + + +++
Sbjct: 380 KEFPNPEMFDPHHFLDEGGNFKKSKY---FMPFSAGKRICVGEALAGMELFLFLTSILQN 436
Query: 530 FNFQMALGAPQVEMT 544
FN + + ++ T
Sbjct: 437 FNLKSLVDPKNLDTT 451
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 176/444 (39%), Gaps = 83/444 (18%)
Query: 134 LPLYELYLT--YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGK 191
LP++ L LT G ++RL G + +++ ++ + + ++ + ++F G+
Sbjct: 45 LPIHLLSLTQKLGPVYRLRLGLQEVVVL-----------NSKRTIEEAMIRKWVDFA-GR 92
Query: 192 GLIPAD---------------GEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLD 236
IP+ +W+ ++ AL ++M + T C+++
Sbjct: 93 PQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSMEPWVDQLTQEFCERMR 152
Query: 237 TAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPI 296
A G ++ FS LT +I F D+L + + V +++ +
Sbjct: 153 VQA--GAPVTIQKEFSLLTCSIICYLTFGNKEDTLVH--AFHDCVQDLMKTWDH------ 202
Query: 297 PVWEIPIWKDISPRLKKV-NAALKLINDTLDDLIAICKRMVDEEELQFHEEYM-----NE 350
W I I D+ P L+ N L + +++ + + E++L+ H+E M +
Sbjct: 203 --WSIQI-LDMVPFLRFFPNPGLWRLKQAIEN-----RDHMVEKQLRRHKESMVAGQWRD 254
Query: 351 QDPSILHFLLASGDDVSSKQLRD-----DLMTMLIAGHETSAAVLTWTFYLL-------- 397
+L + + QL + ++ + I G ET+A+ L+W L
Sbjct: 255 MTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQR 314
Query: 398 ---SKVDSILG-----DRFPTIGDMKKLKYTARVINESLRLYPQPPV-LIRRSLEDDVLG 448
++D LG R T D +L I E LRL P P+ L R+ +
Sbjct: 315 RLQEELDRELGPGASCSRV-TYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIF 373
Query: 449 KYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRK 508
Y I G + ++ H +W+ +F P+R+ G NP+ L FG G R
Sbjct: 374 GYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPGANPSA-------LAFGCGARV 426
Query: 509 CVGDMFATFENIVAVAMLVRQFNF 532
C+G+ A E V +A L++ F
Sbjct: 427 CLGESLARLELFVVLARLLQAFTL 450
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 17/192 (8%)
Query: 355 ILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLS---KVD-----SILGD 406
IL+ LL +S + ++ ++ ML G +T++ L W Y ++ KV +L
Sbjct: 261 ILYRLLGDSK-MSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAA 319
Query: 407 RFPTIGDMKKLKYTARV----INESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISV 462
R GDM + + I E+LRL+P L R + D VL Y I + +++
Sbjct: 320 RHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAI 379
Query: 463 WNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVA 522
+ L R P + D + F+P RW N + L FG G R+C+G A E +
Sbjct: 380 YALGREPTFFFDPENFDPTRWLSKDKNITY----FRNLGFGWGVRQCLGRRIAELEMTIF 435
Query: 523 VAMLVRQFNFQM 534
+ ++ F ++
Sbjct: 436 LINMLENFRVEI 447
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 17/192 (8%)
Query: 355 ILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLS---KVD-----SILGD 406
IL+ LL +S + ++ ++ ML G +T++ L W Y ++ KV +L
Sbjct: 258 ILYRLLGDSK-MSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAA 316
Query: 407 RFPTIGDMKKLKYTARV----INESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISV 462
R GDM + + I E+LRL+P L R + D VL Y I + +++
Sbjct: 317 RHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAI 376
Query: 463 WNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVA 522
+ L R P + D + F+P RW N + L FG G R+C+G A E +
Sbjct: 377 YALGREPTFFFDPENFDPTRWLSKDKNITY----FRNLGFGWGVRQCLGRRIAELEMTIF 432
Query: 523 VAMLVRQFNFQM 534
+ ++ F ++
Sbjct: 433 LINMLENFRVEI 444
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 175/442 (39%), Gaps = 47/442 (10%)
Query: 145 GIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVR 204
G+F ++ G + IV DP ++ S + I+ V G+G+ A R
Sbjct: 37 GVFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAP---YPR 93
Query: 205 RRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFS---RLTLDVIGK 261
R + L ++ A F A +K A + ED + +L + ++ +
Sbjct: 94 MREQLNFLAEELTIAKFQNFVPAIQHEVRKF-MAENWKEDEGVINLLEDCGAMIINTACQ 152
Query: 262 AVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPV---WEIPIWKDISPRLKKVNAAL 318
+F D N + L + S+ P V W + + S R ++ A L
Sbjct: 153 CLFGEDLRKRLNARHFAQ-----LLSKMESSLIPAAVFMPWLLRLPLPQSARCREARAEL 207
Query: 319 KLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTM 378
+ I L ++I + E+E + ++ +L + G +S ++ ++
Sbjct: 208 QKI---LGEII-----VAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAA 259
Query: 379 LIAGHETSAAVLTWTFYLLSK------VDSILG--DRFPTIGD----MKKLKYTARVINE 426
+ AG TS +W+ L +D + D FP + M ++ + R + E
Sbjct: 260 MFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRE 319
Query: 427 SLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPL 485
S+R P P +++ R ++ +V +G Y + +G+ I S H + + ++PER
Sbjct: 320 SIRRDP-PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--- 375
Query: 486 DGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALG-APQVEMT 544
+ D ++ FG G KC+G FA + +A R+++FQ+ P +
Sbjct: 376 ------DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLRDEVPDPDYH 429
Query: 545 TGATIHTTNGLRMTVTRRIKPP 566
T T N + TR+ K P
Sbjct: 430 TMVVGPTLNQCLVKYTRKKKLP 451
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 175/442 (39%), Gaps = 47/442 (10%)
Query: 145 GIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVR 204
G+F ++ G + IV DP ++ S + I+ V G+G+ A R
Sbjct: 43 GVFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAP---YPR 99
Query: 205 RRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFS---RLTLDVIGK 261
R + L ++ A F A +K A + ED + +L + ++ +
Sbjct: 100 MREQLNFLAEELTIAKFQNFVPAIQHEVRKF-MAENWKEDEGVINLLEDCGAMIINTACQ 158
Query: 262 AVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPV---WEIPIWKDISPRLKKVNAAL 318
+F D N + L + S+ P V W + + S R ++ A L
Sbjct: 159 CLFGEDLRKRLNARHFAQ-----LLSKMESSLIPAAVFMPWLLRLPLPQSARCREARAEL 213
Query: 319 KLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTM 378
+ I L ++I + E+E + ++ +L + G +S ++ ++
Sbjct: 214 QKI---LGEII-----VAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAA 265
Query: 379 LIAGHETSAAVLTWTFYLLSK------VDSILG--DRFPTIGD----MKKLKYTARVINE 426
+ AG TS +W+ L +D + D FP + M ++ + R + E
Sbjct: 266 MFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRE 325
Query: 427 SLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPL 485
S+R P P +++ R ++ +V +G Y + +G+ I S H + + ++PER
Sbjct: 326 SIRRDP-PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--- 381
Query: 486 DGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALG-APQVEMT 544
+ D ++ FG G KC+G FA + +A R+++FQ+ P +
Sbjct: 382 ------DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLRDEVPDPDYH 435
Query: 545 TGATIHTTNGLRMTVTRRIKPP 566
T T N + TR+ K P
Sbjct: 436 TMVVGPTLNQCLVKYTRKKKLP 457
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 175/442 (39%), Gaps = 47/442 (10%)
Query: 145 GIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVR 204
G+F ++ G + IV DP ++ S + I+ V G+G+ A R
Sbjct: 52 GVFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAP---YPR 108
Query: 205 RRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFS---RLTLDVIGK 261
R + L ++ A F A +K A + ED + +L + ++ +
Sbjct: 109 MREQLNFLAEELTIAKFQNFVPAIQHEVRKF-MAENWKEDEGVINLLEDCGAMIINTACQ 167
Query: 262 AVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPV---WEIPIWKDISPRLKKVNAAL 318
+F D N + L + S+ P V W + + S R ++ A L
Sbjct: 168 CLFGEDLRKRLNARHFAQ-----LLSKMESSLIPAAVFMPWLLRLPLPQSARCREARAEL 222
Query: 319 KLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTM 378
+ I L ++I + E+E + ++ +L + G +S ++ ++
Sbjct: 223 QKI---LGEII-----VAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAA 274
Query: 379 LIAGHETSAAVLTWTFYLLSK------VDSILG--DRFPTIGD----MKKLKYTARVINE 426
+ AG TS +W+ L +D + D FP + M ++ + R + E
Sbjct: 275 MFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRE 334
Query: 427 SLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPL 485
S+R P P +++ R ++ +V +G Y + +G+ I S H + + ++PER
Sbjct: 335 SIRRDP-PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--- 390
Query: 486 DGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALG-APQVEMT 544
+ D ++ FG G KC+G FA + +A R+++FQ+ P +
Sbjct: 391 ------DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLRDEVPDPDYH 444
Query: 545 TGATIHTTNGLRMTVTRRIKPP 566
T T N + TR+ K P
Sbjct: 445 TMVVGPTLNQCLVKYTRKKKLP 466
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/438 (20%), Positives = 179/438 (40%), Gaps = 50/438 (11%)
Query: 136 LYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLI 194
L L YG +F L FG + +++ + K L D + +S +G G G++
Sbjct: 37 LTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALIDLGEEFSGRGHFPLAERANRGFGIV 96
Query: 195 PADGEIWRVRRRAIVPALHQKYVA--AMIDLFGKATDRLCKKLDTAASEGEDAEMESLFS 252
++G+ W+ RR + L + ++ D + L ++L + D +
Sbjct: 97 FSNGKRWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTF--ILG 154
Query: 253 RLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEI----PIWKDIS 308
+VI +F FD D + + + E+ + P +I P D
Sbjct: 155 CAPCNVICSIIFQKRFDY--KDQQFLNLMEKL---NENIRIVSTPWIQICNNFPTIIDYF 209
Query: 309 PRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLASGDDV 366
P N LK + D++ E+++ H+E M+ +P I FL+ +
Sbjct: 210 PGTH--NKLLKNLAFMESDIL---------EKVKEHQESMDINNPRDFIDCFLIKMEKEK 258
Query: 367 SSKQLRDDLMTMLI-------AGHETSAAVLTW-----------TFYLLSKVDSILG-DR 407
++Q + ++I AG ET++ L + T + +++ ++G +R
Sbjct: 259 QNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNR 318
Query: 408 FPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLH 466
P + D + YT V++E R P + ++ DV Y I +G I S+ ++
Sbjct: 319 SPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVL 378
Query: 467 RSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAML 526
+ + + F+P + +G N ++N ++PF G R CVG+ A E + + +
Sbjct: 379 HDNKEFPNPEMFDPRHFLDEGGNFKKSNY---FMPFSAGKRICVGEGLARMELFLFLTFI 435
Query: 527 VRQFNFQMALGAPQVEMT 544
++ FN + + ++ T
Sbjct: 436 LQNFNLKSLIDPKDLDTT 453
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 22/221 (9%)
Query: 355 ILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILG--------D 406
+L + G +S ++ ++ + AG TS+ TW+ L ++ +
Sbjct: 238 LLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIE 297
Query: 407 RFPTIGD----MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISV 462
FP + M ++ + R ES+R P +L+R+ + D +G Y + +G+ I S
Sbjct: 298 EFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSP 357
Query: 463 WNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVA 522
H + + +++PER + + ++ FG G KC+G F +
Sbjct: 358 LLSHHDEEAFPEPRRWDPER---------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTI 408
Query: 523 VAMLVRQFNFQMALG-APQVEMTTGATIHTTNGLRMTVTRR 562
+A R ++FQ+ P + T T + R+ RR
Sbjct: 409 LATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKYIRR 449
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 22/221 (9%)
Query: 355 ILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILG--------D 406
+L + G +S ++ ++ + AG TS+ TW+ L ++ +
Sbjct: 239 LLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIE 298
Query: 407 RFPTIGD----MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISV 462
FP + M ++ + R ES+R P +L+R+ + D +G Y + +G+ I S
Sbjct: 299 EFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSP 358
Query: 463 WNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVA 522
H + + +++PER + + ++ FG G KC+G F +
Sbjct: 359 LLSHHDEEAFPEPRRWDPER---------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTI 409
Query: 523 VAMLVRQFNFQMALG-APQVEMTTGATIHTTNGLRMTVTRR 562
+A R ++FQ+ P + T T + R+ RR
Sbjct: 410 LATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKYIRR 450
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 35/194 (18%)
Query: 360 LASGDDVSSKQLRDDL---------MTMLIAGHETSAAVLTWTFYLLSKVDSILG-DRFP 409
L SG +V S+ + +L + +LIAG+ET+ +++ +S++ RF
Sbjct: 179 LNSGTEVVSRVVNSNLSDIEKLGYIILLLIAGNETTTNLIS---------NSVIDFTRFN 229
Query: 410 TIGDMKKLKYTARVINESLRLYPQPPVL--IRRSLEDDVLGKYPIKRGEDIFISVWNLHR 467
+++ + I E+LR PPV+ +R++ E LG I+ GE + + + + +R
Sbjct: 230 LWQRIREENLYLKAIEEALRY--SPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANR 287
Query: 468 SPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLV 527
++ D +KF P+R PNP +L FG G C+G A E +A+
Sbjct: 288 DEEVFHDGEKFIPDR----NPNP--------HLSFGSGIHLCLGAPLARLEARIAIEEFS 335
Query: 528 RQFNFQMALGAPQV 541
++F L +V
Sbjct: 336 KRFRHIEILDTEKV 349
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 370 QLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTARVINESLR 429
+LR + T+L+AG+ET+ L Y ++ D++ I + +L A + E LR
Sbjct: 242 ELRTLVATVLVAGYETTNHQLALAMYDFAQ----HPDQWMKIKENPELAPQA--VEEVLR 295
Query: 430 LYPQPPVLIRR-SLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGP 488
P PV R + ED + I G +F+ HR P ++ DAD+F+
Sbjct: 296 WSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFD--------- 346
Query: 489 NPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFN 531
++ + FGGGP C+G A E AVA L + +
Sbjct: 347 --ITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATRLD 387
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 22/221 (9%)
Query: 355 ILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILG--------D 406
+L + G +S ++ ++ + AG TS+ TW+ L ++ +
Sbjct: 237 LLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIE 296
Query: 407 RFPTIGD----MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISV 462
FP + M ++ + R ES+R P +L+R+ + D +G Y + +G+ I S
Sbjct: 297 EFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSP 356
Query: 463 WNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVA 522
H + + +++PER + + ++ FG G KC+G F +
Sbjct: 357 LLSHHDEEAFPEPRRWDPER---------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTI 407
Query: 523 VAMLVRQFNFQMALG-APQVEMTTGATIHTTNGLRMTVTRR 562
+A R ++FQ+ P + T T + R+ RR
Sbjct: 408 LATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKYIRR 448
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 22/221 (9%)
Query: 355 ILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILG--------D 406
+L + G +S ++ ++ + AG TS+ TW+ L ++ +
Sbjct: 238 LLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIE 297
Query: 407 RFPTIGD----MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISV 462
FP + M ++ + R ES+R P +L+R+ + D +G Y + +G+ I S
Sbjct: 298 EFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSP 357
Query: 463 WNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVA 522
H + + +++PER + + ++ FG G KC+G F +
Sbjct: 358 LLSHHDEEAFPEPRRWDPER---------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTI 408
Query: 523 VAMLVRQFNFQMALG-APQVEMTTGATIHTTNGLRMTVTRR 562
+A R ++FQ+ P + T T + R+ RR
Sbjct: 409 LATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKYIRR 449
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 35/194 (18%)
Query: 360 LASGDDVSSKQLRDDL---------MTMLIAGHETSAAVLTWTFYLLSKVDSILG-DRFP 409
L SG +V S+ + +L + +LIAG+ET+ +++ +S++ RF
Sbjct: 179 LNSGTEVVSRVVNSNLSDIEKLGYIILLLIAGNETTTNLIS---------NSVIDFTRFN 229
Query: 410 TIGDMKKLKYTARVINESLRLYPQPPVL--IRRSLEDDVLGKYPIKRGEDIFISVWNLHR 467
+++ + I E+LR PPV+ +R++ E LG I+ GE + + + + +R
Sbjct: 230 LWQRIREENLYLKAIEEALRY--SPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANR 287
Query: 468 SPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLV 527
++ D +KF P+R PNP +L FG G C+G A E +A+
Sbjct: 288 DEEVFHDGEKFIPDR----NPNP--------HLSFGSGIHLCLGAPLARLEARIAIEEFS 335
Query: 528 RQFNFQMALGAPQV 541
++F L +V
Sbjct: 336 KRFRHIEILDTEKV 349
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 370 QLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTARVINESLR 429
+LR + T+L+AG+ET+ L Y ++ D++ I + +L A + E LR
Sbjct: 232 ELRTLVATVLVAGYETTNHQLALAMYDFAQ----HPDQWMKIKENPELAPQA--VEEVLR 285
Query: 430 LYPQPPVLIRR-SLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGP 488
P PV R + ED + I G +F+ HR P ++ DAD+F+
Sbjct: 286 WSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFD--------- 336
Query: 489 NPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFN 531
++ + FGGGP C+G A E AVA L + +
Sbjct: 337 --ITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATRLD 377
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 22/221 (9%)
Query: 355 ILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILG--------D 406
+L + G +S ++ ++ + AG TS+ TW+ L ++ +
Sbjct: 251 LLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIE 310
Query: 407 RFPTIGD----MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISV 462
FP + M ++ + R ES+R P +L+R+ + D +G Y + +G+ I S
Sbjct: 311 EFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSP 370
Query: 463 WNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVA 522
H + + +++PER + + ++ FG G KC+G F +
Sbjct: 371 LLSHHDEEAFPEPRRWDPER---------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTI 421
Query: 523 VAMLVRQFNFQMALG-APQVEMTTGATIHTTNGLRMTVTRR 562
+A R ++FQ+ P + T T + R+ RR
Sbjct: 422 LATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKYIRR 462
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 22/221 (9%)
Query: 355 ILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILG--------D 406
+L + G +S ++ ++ + AG TS+ TW+ L ++ +
Sbjct: 251 LLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIE 310
Query: 407 RFPTIGD----MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISV 462
FP + M ++ + R ES+R P +L+R+ + D +G Y + +G+ I S
Sbjct: 311 EFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSP 370
Query: 463 WNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVA 522
H + + +++PER + + ++ FG G KC+G F +
Sbjct: 371 LLSHHDEEAFPEPRRWDPER---------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTI 421
Query: 523 VAMLVRQFNFQMALG-APQVEMTTGATIHTTNGLRMTVTRR 562
+A R ++FQ+ P + T T + R+ RR
Sbjct: 422 LATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKYIRR 462
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 18/179 (10%)
Query: 362 SGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTA 421
SGD ++ ++ +LIAGHET+ ++ + + G D + +
Sbjct: 237 SGDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTP---GQWAALAADGSR---AS 290
Query: 422 RVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPE 481
VI E++R P ++ R + +D +G + + +G+ + + + HR P I D+F+P+
Sbjct: 291 AVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPD 350
Query: 482 RWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALGAPQ 540
R + +L FG G C+G A E VA+ L +F G P+
Sbjct: 351 RAQIR------------HLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGEPE 397
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 15/140 (10%)
Query: 422 RVINESLRLYPQPPV--LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFN 479
R I+E LR P L R +LED + I+ G+ +++S +R P ++ D D+ +
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 480 PERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAV-AMLVRQFNFQMALGA 538
ER PNP ++ FG GP C G M A E+ + V A+L R ++A+
Sbjct: 336 FER----SPNP--------HVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP 383
Query: 539 PQVEMTTGATIHTTNGLRMT 558
V GA I L +T
Sbjct: 384 EDVPFKKGALIRGPEALPVT 403
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 15/140 (10%)
Query: 422 RVINESLRLYPQPPV--LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFN 479
R I+E LR P L R +LED + I+ G+ +++S +R P ++ D D+ +
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 480 PERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAV-AMLVRQFNFQMALGA 538
ER PNP ++ FG GP C G M A E+ + V A+L R ++A+
Sbjct: 336 FER----SPNP--------HVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP 383
Query: 539 PQVEMTTGATIHTTNGLRMT 558
V GA I L +T
Sbjct: 384 EDVPFKKGALIRGPEALPVT 403
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 15/140 (10%)
Query: 422 RVINESLRLYPQPPV--LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFN 479
R I+E LR P L R +LED + I+ G+ +++S +R P ++ D D+ +
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 480 PERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAV-AMLVRQFNFQMALGA 538
ER PNP ++ FG GP C G M A E+ + V A+L R ++A+
Sbjct: 336 FER----SPNP--------HVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP 383
Query: 539 PQVEMTTGATIHTTNGLRMT 558
V GA I L +T
Sbjct: 384 EDVPFKKGALIRGPEALPVT 403
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 15/140 (10%)
Query: 422 RVINESLRLYPQPPV--LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFN 479
R I+E LR P L R +LED + I+ G+ +++S +R P ++ D D+ +
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 480 PERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAV-AMLVRQFNFQMALGA 538
ER PNP ++ FG GP C G M A E+ + V A+L R ++A+
Sbjct: 336 FER----SPNP--------HVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP 383
Query: 539 PQVEMTTGATIHTTNGLRMT 558
V GA I L +T
Sbjct: 384 EDVPFKKGALIRGPEALPVT 403
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 15/140 (10%)
Query: 422 RVINESLRLYPQPPV--LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFN 479
R I+E LR P L R +LED + I+ G+ +++S +R P ++ D D+ +
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 480 PERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAV-AMLVRQFNFQMALGA 538
ER PNP ++ FG GP C G M A E+ + V A+L R ++A+
Sbjct: 336 FER----SPNP--------HVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP 383
Query: 539 PQVEMTTGATIHTTNGLRMT 558
V GA I L +T
Sbjct: 384 EDVPFKKGALIRGPEALPVT 403
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 15/140 (10%)
Query: 422 RVINESLRLYPQPPV--LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFN 479
R I+E LR P L R +LED + I+ G+ +++S +R P ++ D D+ +
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 480 PERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAV-AMLVRQFNFQMALGA 538
ER PNP ++ FG GP C G M A E+ + V A+L R ++A+
Sbjct: 336 FER----SPNP--------HVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP 383
Query: 539 PQVEMTTGATIHTTNGLRMT 558
V GA I L +T
Sbjct: 384 EDVPFKKGALIRGPEALPVT 403
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 15/140 (10%)
Query: 422 RVINESLRLYPQPPV--LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFN 479
R I+E LR P L R +LED + I+ G+ +++S +R P ++ D D+ +
Sbjct: 276 RAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
Query: 480 PERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAV-AMLVRQFNFQMALGA 538
ER PNP ++ FG GP C G M A E+ + V A+L R ++A+
Sbjct: 336 FER----SPNP--------HVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP 383
Query: 539 PQVEMTTGATIHTTNGLRMT 558
V GA I L +T
Sbjct: 384 EDVPFKKGALIRGPEALPVT 403
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 171/415 (41%), Gaps = 57/415 (13%)
Query: 130 EAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVM 189
E L +++ + G IFR G + V P + + + +S + IL + +
Sbjct: 36 EHLHLEMHQTFQELGPIFRYNLGGPRMVCVMLPEDVEKLQQVDSLHPCRMILEPWVAYRQ 95
Query: 190 GKG----LIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDA 245
+G + +G WR R + P + L KA R +D A + A
Sbjct: 96 HRGHKCGVFLLNGPEWRFNRLRLNPDV----------LSPKAVQRFLPMVDAVARDFSQA 145
Query: 246 EMESLFSR----LTLDVIGKAVFNYDFDS-----LTNDTGIV-----EAVYTVLREAEDR 291
+ + LTLDV ++F+Y ++ G+V A L E
Sbjct: 146 LKKKVLQNARGSLTLDV-QPSIFHYTIEASNLALFGERLGLVGHSPSSASLNFLHALEVM 204
Query: 292 SVAPIPVWEIP--IWKDISPRLKKVN-AALKLINDTLDDLIAICKRMVDEEELQFHEEYM 348
+ + + +P + + ISP++ K + A I D+ I +++ E + Y
Sbjct: 205 FKSTVQLMFMPRSLSRWISPKVWKEHFEAWDCIFQYGDNCI---QKIYQELAFNRPQHYT 261
Query: 349 NEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---VDSILG 405
+ LL + ++S + ++ + M + +T+A L T + L++ V IL
Sbjct: 262 G----IVAELLLKA--ELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILR 315
Query: 406 DR----FPTIGDMKK-----LKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGE 456
+I + + L + E+LRLYP L R D VL Y I G
Sbjct: 316 QESLAAAASISEHPQKATTELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAGT 375
Query: 457 DIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVG 511
+ + +++L R+ ++ +++NP+RW LD + +++ ++PFG G R+C+G
Sbjct: 376 LVQVFLYSLGRNAALFPRPERYNPQRW-LDI---RGSGRNFHHVPFGFGMRQCLG 426
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 166/420 (39%), Gaps = 50/420 (11%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPADGEIW 201
YG +F + FG ++ K L DN + +S +G G G+I ++G+ W
Sbjct: 43 YGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRITKGLGIISSNGKRW 102
Query: 202 RVRRRAIVPALHQKYVA--AMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVI 259
+ RR + L + ++ D + L ++L + D + +VI
Sbjct: 103 KEIRRFSLTTLRNFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTF--ILGCAPCNVI 160
Query: 260 GKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEI----PIWKDISPRLKKVN 315
VF FD + + + R E+ + P ++ P+ D P N
Sbjct: 161 CSVVFQKRFDYKDQN-----FLTLMKRFNENFRILNSPWIQVCNNFPLLIDCFPGTH--N 213
Query: 316 AALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLASGDDVSSKQ--- 370
LK + T R E+++ H+ ++ +P I FL+ + +++
Sbjct: 214 KVLKNVALT---------RSYIREKVKEHQASLDVNNPRDFIDCFLIKMEQEKDNQKSEF 264
Query: 371 ----LRDDLMTMLIAGHETSAAVLTW-----------TFYLLSKVDSILG-DRFPTIGDM 414
L + + +AG ET++ L + T + ++D ++G R P + D
Sbjct: 265 NIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDR 324
Query: 415 KKLKYTARVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPHIWD 473
+ YT V++E R P + ++ D Y I +G I + ++ +
Sbjct: 325 SHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFP 384
Query: 474 DADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQ 533
+ + F+P + LD N N DY ++PF G R C G+ A E + + +++ FN +
Sbjct: 385 NPNIFDPGHF-LDK-NGNFKKSDY-FMPFSAGKRICAGEGLARMELFLFLTTILQNFNLK 441
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 26/173 (15%)
Query: 363 GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFY-LLSKVDSILGDRFPTIGDMKKLKYT- 420
GD +S ++LRD L+ M+ AG+ET+ V+ + LL++ D + ++K + T
Sbjct: 224 GDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQ--------LALVRKGEVTW 275
Query: 421 ARVINESLRLYPQPPVL-IRRSLEDDVL--GKYPIKRGEDIFISVWNLHRSPHIWDDADK 477
A V+ E+LR P L +R ++ D L G+ I RGE I S +R P +DAD
Sbjct: 276 ADVVEETLRHEPAVKHLPLRYAVTDIALPDGRT-IARGEPILASYAAANRHPDWHEDADT 334
Query: 478 FNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQF 530
F+ R T ++ +L FG G C+G A E +A+ L +F
Sbjct: 335 FDATR----------TVKE--HLAFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 16/177 (9%)
Query: 381 AGHETSAAVLTWTFYLLSK-----------VDSILG-DRFPTIGDMKKLKYTARVINESL 428
AG ET++ L ++ LL K ++ ++G R P + D ++ YT VI+E
Sbjct: 276 AGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQ 335
Query: 429 RLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDG 487
R P + ++ DV Y I +G DI S+ ++ + + F+P + LD
Sbjct: 336 RFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHF-LDE 394
Query: 488 PNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALGAPQVEMT 544
N DY ++PF G R CVG+ A E + + +++ F Q + +++T
Sbjct: 395 SG-NFKKSDY-FMPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQSLVEPKDLDIT 449
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 363 GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLL----SKVDSILGDRFPTIGDMKKLK 418
G +S K + ++ +L+A E + L Y L +++ +L DR
Sbjct: 251 GMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR----------S 300
Query: 419 YTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKF 478
R I E+LR P ++ R+ +D V+G IK+ +F + +R P ++ D F
Sbjct: 301 LVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVF 360
Query: 479 NPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFE-NIVAVAMLVRQFNFQM 534
N R L + +L FG G CVG FA E IVA +L + N ++
Sbjct: 361 NIHREDLGIKSAFSGAAR--HLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRL 415
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 16/180 (8%)
Query: 378 MLIAGHETSAAVLTWTFYLLSK-----------VDSILG-DRFPTIGDMKKLKYTARVIN 425
+ AG ET++ L + +L K +D ++G R P I D +++ Y V++
Sbjct: 275 LFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVH 334
Query: 426 ESLRLYPQ-PPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWP 484
E R P L + D + Y I +G + ++ ++ + D +KF PE +
Sbjct: 335 EIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHF- 393
Query: 485 LDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALGAPQVEMT 544
N DY + PF G R C G+ A E + + +++ FN + + ++++
Sbjct: 394 -LNENGKFKYSDY-FKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLS 451
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 364 DDVSSKQLRDDLMTMLIAGHETSAAVLTWT-FYLLSKVDSILGDRFPTIGDMKKLKYTAR 422
D ++ ++ + + IAGHET+ +++ + LL + +L R + L TA
Sbjct: 217 DKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLR-----ENPDLIGTA- 270
Query: 423 VINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPE 481
+ E LR Y P + R +D+ + I++GE +++ + +R P I+ + D F+
Sbjct: 271 -VEECLR-YESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDIT 328
Query: 482 RWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQF 530
R PNP +L FG G C+G A E +A+ L+++
Sbjct: 329 R----SPNP--------HLSFGHGHHVCLGSSLARLEAQIAINTLLQRM 365
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 10/111 (9%)
Query: 421 ARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNP 480
A +INE +R+ P +R ED +G I+ G I + +R P ++DD D F+
Sbjct: 267 AAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 326
Query: 481 ERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFN 531
R P N L FG GP C G + + E A+L ++
Sbjct: 327 TRPPAASRN----------LSFGLGPHSCAGQIISRAEATTVFAVLAERYE 367
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 10/111 (9%)
Query: 421 ARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNP 480
A +INE +R+ P +R ED +G I+ G I + +R P ++DD D F+
Sbjct: 265 AAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 324
Query: 481 ERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFN 531
R P N L FG GP C G + + E A+L ++
Sbjct: 325 TRPPAASRN----------LSFGLGPHSCAGQIISRAEATTVFAVLAERYE 365
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 114/277 (41%), Gaps = 44/277 (15%)
Query: 295 PIPVWEIPIWKDISPRLKKVNAALKLINDTL---DDLIAICKRMVDEEELQFHEEYMNEQ 351
P+P+ I I+P +KKV L+ L D++ +I ++ + E + F ++ ++ +
Sbjct: 121 PLPILVISKMLGINPDVKKVKDWSDLVALRLGRADEIFSIGRKYL--ELISFSKKELDSR 178
Query: 352 DPSILHFLLA--SGDDVSSKQLRDDLMTMLIAGHETSA-----AVLTWTFYLLSKVDSIL 404
+ L + ++S + + ++IAG+ET+ A+ +T Y
Sbjct: 179 KGKEIVDLTGKIANSNLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTLY--------- 229
Query: 405 GDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWN 464
D + K + + E+LR P IR + E + I GE + + + +
Sbjct: 230 -----NSWDYVREKGALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIAS 284
Query: 465 LHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVA 524
+R ++ D D F P+R PNP +L FG G C+G A E +A+
Sbjct: 285 ANRDEEVFKDPDSFIPDR----TPNP--------HLSFGSGIHLCLGAPLARLEARIALE 332
Query: 525 MLVRQFNFQMALGAPQVEMTTGATIHTTNGLRMTVTR 561
++F + + +++ NG R V R
Sbjct: 333 EFAKKFRVKEIVKKEKIDN------EVLNGYRKLVVR 363
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 18/153 (11%)
Query: 377 TMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPV 436
++L AG +T+ + Y L++ D F + L A E++R
Sbjct: 247 SLLSAGLDTTVNGIAAAVYCLAR----FPDEFARLRADPSLARNA--FEEAVRFESPVQT 300
Query: 437 LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQD 496
R + D L I GE + + + + +R P WDD D++ + T +
Sbjct: 301 FFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRY------------DITRKT 348
Query: 497 YCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQ 529
++ FG G CVG + A E V +A L R+
Sbjct: 349 SGHVGFGSGVHMCVGQLVARLEGEVVLAALARK 381
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 37/200 (18%)
Query: 344 HEEYMNEQ--DPSI--------LHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWT 393
H+ Y+NEQ P++ +H +G+ ++ + + ++L AG +T+ +
Sbjct: 203 HQAYVNEQCQRPNLAPGGFGACIHAFTDTGE-ITPDEAPLLVRSLLSAGLDTTVNGIGAA 261
Query: 394 FYLLSKVDSILGDRFPTIGDMKKLK----YTARVINESLRLYPQPPVLIRRSLEDDVLGK 449
Y L+ RFP G++++L+ E++R R + + LG
Sbjct: 262 VYCLA--------RFP--GELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVELGG 311
Query: 450 YPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKC 509
I GE + + + + +R P W D D + + T + ++ FG G C
Sbjct: 312 AVIGEGEKVLMFLGSANRDPRRWSDPDLY------------DITRKTSGHVGFGSGVHMC 359
Query: 510 VGDMFATFENIVAVAMLVRQ 529
VG + A E V ++ L R+
Sbjct: 360 VGQLVARLEGEVMLSALARK 379
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 423 VINESLRLYPQPPVLIRRSLEDDVL----GKYPIKRGEDIFISVWNLHRSPHIWDDADKF 478
+I ESLRL + IR + ED L G Y I++ + I + +H P I+ D F
Sbjct: 332 IIKESLRL-SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTF 390
Query: 479 NPERWPLDGPNPNETN-------QDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFN 531
+R+ LD +T Y Y+PFG G C G +FA E + +++ F
Sbjct: 391 KYDRY-LDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFE 449
Query: 532 FQMALGAPQV 541
++ G +
Sbjct: 450 LELIEGQAKC 459
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 423 VINESLRLYPQPPVLIRRSLEDDVL----GKYPIKRGEDIFISVWNLHRSPHIWDDADKF 478
+I ESLRL + IR + ED L G Y I++ + I + +H P I+ D F
Sbjct: 332 IIKESLRL-SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTF 390
Query: 479 NPERWPLDGPNPNETN-------QDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFN 531
+R+ LD +T Y Y+PFG G C G +FA E + +++ F
Sbjct: 391 KYDRY-LDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFE 449
Query: 532 FQMALGAPQV 541
++ G +
Sbjct: 450 LELIEGQAKC 459
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 30/189 (15%)
Query: 362 SGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTA 421
+GD ++ ++ L M+ AGHET+ +++ LS T + + L +
Sbjct: 223 NGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLS-----------THPEQRALVLSG 271
Query: 422 R-----VINESLRL-YPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWD-D 474
V+ E+LR P VLIR + ED +G I G+ + +S L R
Sbjct: 272 EAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPT 331
Query: 475 ADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQM 534
AD+F+ R ++ FG GP C G + E VA+ L +F +
Sbjct: 332 ADRFDLTR-----------TSGNRHISFGHGPHVCPGAALSRMEAGVALPALYARFP-HL 379
Query: 535 ALGAPQVEM 543
L P E+
Sbjct: 380 DLAVPAAEL 388
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 46/275 (16%)
Query: 296 IPVWEIPIWKDISPRLKK---VNAALKLINDT---LDDLIAICKRMVDEEELQFHEEYMN 349
+P + ++D S RL + +AL ND LD LI QF E
Sbjct: 165 VPYADHEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLIT-----------QFQTEPGA 213
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLL----SKVDSILG 405
+++ LA+G+ + ++L M +LIAGHET+A++ + + L + ++
Sbjct: 214 GLVGALVADQLANGE-IDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRA 272
Query: 406 DRFPTIGDMKK-LKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWN 464
DR G +++ L+Y A R+ + + +V G+ I+ GE + +
Sbjct: 273 DRSLVPGAVEELLRYLAIADIAGGRVA---------TADIEVEGQL-IRAGEGVIVVNSI 322
Query: 465 LHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFE-NIVAV 523
+R +++D D + R +L FG G +C+G A E ++
Sbjct: 323 ANRDGTVYEDPDALDIHR------------SARHHLAFGFGVHQCLGQNLARLELEVILN 370
Query: 524 AMLVRQFNFQMALGAPQVEMTTGATIHTTNGLRMT 558
A++ R ++A+ Q+ + G TI N L +T
Sbjct: 371 ALMDRVPTLRLAVPVEQLVLRPGTTIQGVNELPVT 405
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 46/275 (16%)
Query: 296 IPVWEIPIWKDISPRLKK---VNAALKLINDT---LDDLIAICKRMVDEEELQFHEEYMN 349
+P + ++D S RL + +AL ND LD LI QF E
Sbjct: 165 VPYADHEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLIT-----------QFQTEPGA 213
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLL----SKVDSILG 405
+++ LA+G+ + ++L M +LIAGHET+A++ + + L + ++
Sbjct: 214 GLVGALVADQLANGE-IDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRA 272
Query: 406 DRFPTIGDMKK-LKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWN 464
DR G +++ L+Y A R+ + + +V G+ I+ GE + +
Sbjct: 273 DRSLVPGAVEELLRYLAIADIAGGRVA---------TADIEVEGQL-IRAGEGVIVVNSI 322
Query: 465 LHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFE-NIVAV 523
+R +++D D + R +L FG G +C+G A E ++
Sbjct: 323 ANRDGTVYEDPDALDIHR------------SARHHLAFGFGVHQCLGQNLARLELEVILN 370
Query: 524 AMLVRQFNFQMALGAPQVEMTTGATIHTTNGLRMT 558
A++ R ++A+ Q+ + G TI N L +T
Sbjct: 371 ALMDRVPTLRLAVPVEQLVLRPGTTIQGVNELPVT 405
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 46/275 (16%)
Query: 296 IPVWEIPIWKDISPRLKK---VNAALKLINDT---LDDLIAICKRMVDEEELQFHEEYMN 349
+P + ++D S RL + +AL ND LD LI QF E
Sbjct: 165 VPYADHEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLIT-----------QFQTEPGA 213
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLL----SKVDSILG 405
+++ LA+G+ + ++L M +LIAGHET+A++ + + L + ++
Sbjct: 214 GLVGALVADQLANGE-IDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRA 272
Query: 406 DRFPTIGDMKK-LKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWN 464
DR G +++ L+Y A R+ + + +V G+ I+ GE + +
Sbjct: 273 DRSLVPGAVEELLRYLAIADIAGGRVA---------TADIEVEGQL-IRAGEGVIVVNSI 322
Query: 465 LHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFE-NIVAV 523
+R +++D D + R +L FG G +C+G A E ++
Sbjct: 323 ANRDGTVYEDPDALDIHR------------SARHHLAFGFGVHQCLGQNLARLELEVILN 370
Query: 524 AMLVRQFNFQMALGAPQVEMTTGATIHTTNGLRMT 558
A++ R ++A+ Q+ + G TI N L +T
Sbjct: 371 ALMDRVPTLRLAVPVEQLVLRPGTTIQGVNELPVT 405
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 46/275 (16%)
Query: 296 IPVWEIPIWKDISPRLKK---VNAALKLINDT---LDDLIAICKRMVDEEELQFHEEYMN 349
+P + ++D S RL + +AL ND LD LI QF E
Sbjct: 165 VPYADHEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLIT-----------QFQTEPGA 213
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLL----SKVDSILG 405
+++ LA+G+ + ++L M +LIAGHET+A++ + + L + ++
Sbjct: 214 GLVGALVADQLANGE-IDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRA 272
Query: 406 DRFPTIGDMKK-LKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWN 464
DR G +++ L+Y A R+ + + +V G+ I+ GE + +
Sbjct: 273 DRSLVPGAVEELLRYLAIADIAGGRVA---------TADIEVEGQL-IRAGEGVIVVNSI 322
Query: 465 LHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFE-NIVAV 523
+R +++D D + R +L FG G +C+G A E ++
Sbjct: 323 ANRDGTVYEDPDALDIHR------------SARHHLAFGFGVHQCLGQNLARLELEVILN 370
Query: 524 AMLVRQFNFQMALGAPQVEMTTGATIHTTNGLRMT 558
A++ R ++A+ Q+ + G TI N L +T
Sbjct: 371 ALMDRVPTLRLAVPVEQLVLRPGTTIQGVNELPVT 405
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 151/367 (41%), Gaps = 73/367 (19%)
Query: 186 EFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDA 245
E V G GL+ D RR +V A + + L +A + + +D A+ G+ A
Sbjct: 97 EMVKG-GLLSMDPPEHSRLRRLVVKAFTARRAES---LRPRAREIAHELVDQMAATGQPA 152
Query: 246 EMESLFSR-LTLDVIGK--AVFNYDFDSLTNDTG----IVEAVYTVLREAEDRSVAPIPV 298
++ ++F+R L + VI + V + D D T +G E ++EA +++ A
Sbjct: 153 DLVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLSTAEVTAEEMQEAAEQAYA---- 208
Query: 299 WEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHF 358
D+ R +K + DDL++ + D++
Sbjct: 209 ----YMGDLIDRRRK---------EPTDDLVSALVQARDQQ------------------- 236
Query: 359 LLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLK 418
D +S ++L D + +L+AG+E++ + YLL + D +L
Sbjct: 237 -----DSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLL----DRPELI 287
Query: 419 YTARVINESLRLYP--QPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDAD 476
+A + E R P + R ++ED L I+ GE + S +R + DAD
Sbjct: 288 PSA--VEELTRWVPLGVGTAVPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDAD 345
Query: 477 KFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMAL 536
+ + +R P NQ +L FG G C+G A E VA+ +L+++ + L
Sbjct: 346 RIDVDRTP---------NQ---HLGFGHGVHHCLGAPLARVELQVALEVLLQRLP-GIRL 392
Query: 537 GAPQVEM 543
G P+ ++
Sbjct: 393 GIPETQL 399
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 47/209 (22%)
Query: 334 RMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTM----LIAGHETSAAV 389
R++D + Q E+ +L L+ + D+ S+ ++L+ M L+AGHET+ +
Sbjct: 220 RLIDSKRGQDGED--------LLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNL 271
Query: 390 LTWTFY-LLSKVDSILGDRFPTIGDM--------KKLKYTARVINESLRLYPQPPVLIRR 440
+ Y LLS D + R DM + L+Y V + + R +P PV
Sbjct: 272 IANGMYALLSHPDQLAALR----ADMTLLDGAVEEMLRYEGPVESATYR-FPVEPV---- 322
Query: 441 SLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYL 500
D+ G I G+ + + + + HR+P + D +F+ R +L
Sbjct: 323 ----DLDGTV-IPAGDTVLVVLADAHRTPERFPDPHRFDIRR------------DTAGHL 365
Query: 501 PFGGGPRKCVGDMFATFENIVAVAMLVRQ 529
FG G C+G A E +AV L+ +
Sbjct: 366 AFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 150/367 (40%), Gaps = 73/367 (19%)
Query: 186 EFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDA 245
E V G GL+ D RR +V A + + L +A + + +D A+ G+ A
Sbjct: 97 EMVKG-GLLSMDPPEHSRLRRLVVKAFTARRAES---LRPRAREIAHELVDQMAATGQPA 152
Query: 246 EMESLFSR-LTLDVIGK--AVFNYDFDSLTNDTG----IVEAVYTVLREAEDRSVAPIPV 298
++ ++F+R L + VI + V + D D T +G E ++EA +++ A
Sbjct: 153 DLVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLSTAEVTAEEMQEAAEQAYA---- 208
Query: 299 WEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHF 358
D+ R +K + DDL++ + D++
Sbjct: 209 ----YMGDLIDRRRK---------EPTDDLVSALVQARDQQ------------------- 236
Query: 359 LLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLK 418
D +S ++L D + +L+AG+E++ + YLL + D +L
Sbjct: 237 -----DSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLL----DRPELI 287
Query: 419 YTARVINESLRLYP--QPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDAD 476
+A + E R P R ++ED L I+ GE + S +R + DAD
Sbjct: 288 PSA--VEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDAD 345
Query: 477 KFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMAL 536
+ + +R P NQ +L FG G C+G A E VA+ +L+++ + L
Sbjct: 346 RIDVDRTP---------NQ---HLGFGHGVHHCLGAPLARVELQVALEVLLQRLP-GIRL 392
Query: 537 GAPQVEM 543
G P+ ++
Sbjct: 393 GIPETQL 399
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 33/176 (18%)
Query: 363 GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLL----SKVDSILGDRFPTIGDMKKLK 418
GDD + ++LR + +++AG + + ++ + ++D+ GD +
Sbjct: 218 GDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDE----------Q 267
Query: 419 YTARVINESLRL----YPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDD 474
R ++E +R Y P + R ED L IK+G+ + S+ +R P + D
Sbjct: 268 SAQRAVDELIRYLTVPYSPTPRIAR---EDLTLAGQEIKKGDSVICSLPAANRDPALAPD 324
Query: 475 ADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQF 530
D+ + R P+ ++ FG G C+G A E L R+F
Sbjct: 325 VDRLDVTREPIP------------HVAFGHGVHHCLGAALARLELRTVFTELWRRF 368
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 47/209 (22%)
Query: 334 RMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTM----LIAGHETSAAV 389
R++D + Q E+ +L L+ + D+ S+ ++L+ M L+AGHET+ +
Sbjct: 220 RLIDSKRGQDGED--------LLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNL 271
Query: 390 LTWTFY-LLSKVDSILGDRFPTIGDM--------KKLKYTARVINESLRLYPQPPVLIRR 440
+ Y LLS D + R DM + L+Y V + + R +P PV
Sbjct: 272 IANGMYALLSHPDQLAALR----ADMTLLDGAVEEMLRYEGPVESATYR-FPVEPV---- 322
Query: 441 SLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYL 500
D+ G I G+ + + + + HR+P + D +F+ R +L
Sbjct: 323 ----DLDGTV-IPAGDTVLVVLADAHRTPERFPDPHRFDIRR------------DTAGHL 365
Query: 501 PFGGGPRKCVGDMFATFENIVAVAMLVRQ 529
FG G C+G A E +AV L+ +
Sbjct: 366 AFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 47/209 (22%)
Query: 334 RMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTM----LIAGHETSAAV 389
R++D + Q E+ +L L+ + D+ S+ ++L+ M L+AGHET+ +
Sbjct: 220 RLIDSKRGQDGED--------LLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNL 271
Query: 390 LTWTFY-LLSKVDSILGDRFPTIGDM--------KKLKYTARVINESLRLYPQPPVLIRR 440
+ Y LLS D + R DM + L+Y V + + R +P PV
Sbjct: 272 IANGMYALLSHPDQLAALR----ADMTLLDGAVEEMLRYEGPVESATYR-FPVEPV---- 322
Query: 441 SLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYL 500
D+ G I G+ + + + + HR+P + D +F+ R +L
Sbjct: 323 ----DLDGTV-IPAGDTVLVVLADAHRTPERFPDPHRFDIRR------------DTAGHL 365
Query: 501 PFGGGPRKCVGDMFATFENIVAVAMLVRQ 529
FG G C+G A E +AV L+ +
Sbjct: 366 AFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 150/367 (40%), Gaps = 73/367 (19%)
Query: 186 EFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDA 245
E V G GL+ D RR +V A + + L +A + + +D A+ G+ A
Sbjct: 97 EMVKG-GLLSMDPPEHSRLRRLVVKAFTARRAES---LRPRAREIAHELVDQMAATGQPA 152
Query: 246 EMESLFSR-LTLDVIGK--AVFNYDFDSLTNDTG----IVEAVYTVLREAEDRSVAPIPV 298
++ ++F+R L + VI + V + D D T +G E ++EA +++ A
Sbjct: 153 DLVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLSTAEVTAEEMQEAAEQAYA---- 208
Query: 299 WEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHF 358
D+ R +K + DDL++ + D++
Sbjct: 209 ----YMGDLIDRRRK---------EPTDDLVSALVQARDQQ------------------- 236
Query: 359 LLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLK 418
D +S ++L D + +L+AG+E++ + YLL + D +L
Sbjct: 237 -----DSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLL----DRPELI 287
Query: 419 YTARVINESLRLYP--QPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDAD 476
+A + E R P R ++ED L I+ GE + S +R + DAD
Sbjct: 288 PSA--VEELTRWVPLGVGTAAPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDAD 345
Query: 477 KFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMAL 536
+ + +R P NQ +L FG G C+G A E VA+ +L+++ + L
Sbjct: 346 RIDVDRTP---------NQ---HLGFGHGVHHCLGAPLARVELQVALEVLLQRLP-GIRL 392
Query: 537 GAPQVEM 543
G P+ ++
Sbjct: 393 GIPETQL 399
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 28/200 (14%)
Query: 342 QFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTM----------LIAGHETSAAVLT 391
Q H E + D I GDD+ S + DD +T+ LI G+ET+ +T
Sbjct: 205 QAHTEILVYFDELITARRKEPGDDLVSTLVTDDDLTIDDVLLNCDNVLIGGNETTRHAIT 264
Query: 392 WTFYLLSKVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYP 451
+ L+ V +L D+ V+ E LR ++R + D +
Sbjct: 265 GAVHALATVPGLLTALRDGSADVDT------VVEEVLRWTSPAMHVLRVTTADVTINGRD 318
Query: 452 IKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVG 511
+ G + + +R P +DD D F P R PN ++ FG G C+G
Sbjct: 319 LPSGTPVVAWLPAANRDPAEFDDPDTFLPGR------KPNR------HITFGHGMHHCLG 366
Query: 512 DMFATFENIVAVAMLVRQFN 531
A E V + +L + +
Sbjct: 367 SALARIELSVVLRVLAERVS 386
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 23/157 (14%)
Query: 375 LMTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQP 434
+M ++I G+ET+ ++ ++ + I+ D LK + + E+LR Y
Sbjct: 182 IMLLIIGGNETTTNLIGNMIRVIDENPDIIDD---------ALKNRSGFVEETLRYYSPI 232
Query: 435 PVLIRR-SLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNET 493
L R + ED + IK+G+ + + + + +R +D+ D F R +
Sbjct: 233 QFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRREM-------- 284
Query: 494 NQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQF 530
+L FG G C+G A E +A+ ++ F
Sbjct: 285 -----HLAFGIGIHMCLGAPLARLEASIALNDILNHF 316
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 423 VINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNL--HRSPHIWDDADKFNP 480
++ E LR P P + R + + + PI D+ ++ W L +R DD D+F+P
Sbjct: 297 IVEEVLRYRPPFPQMQRTTTKATEVAGVPIP--ADVMVNTWVLSANRDSDAHDDPDRFDP 354
Query: 481 ERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFN 531
R + L FG G C+G A EN VA+ ++ +F
Sbjct: 355 SR----------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFG 395
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 423 VINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNL--HRSPHIWDDADKFNP 480
++ E LR P P + R + + + PI D+ ++ W L +R DD D+F+P
Sbjct: 277 IVEEVLRYRPPFPQMQRTTTKATEVAGVPIP--ADVMVNTWVLSANRDSDAHDDPDRFDP 334
Query: 481 ERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFN 531
R + L FG G C+G A EN VA+ ++ +F
Sbjct: 335 SR----------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFG 375
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 107/261 (40%), Gaps = 41/261 (15%)
Query: 305 KDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHE------EYMN--------- 349
+D P + K+ +++ + +A ++ DE +FHE +Y N
Sbjct: 174 EDDEPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGFTVDRRSC 233
Query: 350 --EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILG-D 406
+ S+L G+ + K + + + AGH+T+++ S +I+G
Sbjct: 234 PKDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSS---------SSGGAIIGLS 284
Query: 407 RFPTIGDMKKL--KYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWN 464
R P + K R+++E++R +R +L D + IKRG+ I +S +
Sbjct: 285 RNPEQLALAKSDPALIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPS 344
Query: 465 LHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVA 524
+R ++ + D+F+ R+P N+ +L FG G C+G A E +
Sbjct: 345 ANRDEEVFSNPDEFDITRFP---------NR---HLGFGWGAHMCLGQHLAKLEMKIFFE 392
Query: 525 MLVRQFNFQMALGAPQVEMTT 545
L+ + G P++ T
Sbjct: 393 ELLPKLKSVELSGPPRLVATN 413
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 424 INESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERW 483
+ E R YP P L +D V K+G + + ++ + P +WD D+F PER+
Sbjct: 280 VQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERF 339
Query: 484 PLDGPNPNETNQDYCYLPFGGGP----RKCVGDMFATFENIVAVAMLVRQFNF 532
N + +P GGG +C G+ ++ LV Q +
Sbjct: 340 AEREENL------FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEY 386
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 378 MLIAGHETSAAVLTWTFY-LLSKVDSILGDRFPTIGDMKKLKYTARVINESLRLYP-QPP 435
+L AGHET+A +++ LLS + + T+ + T + E LR +
Sbjct: 242 LLTAGHETTANMISLGVVGLLSHPEQL------TVVKANPGR-TPMAVEELLRYFTIADG 294
Query: 436 VLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQ 495
V R + ED +G IK GE + +S+ + + P ++ D + ER
Sbjct: 295 VTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGA----------- 343
Query: 496 DYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQF-NFQMALGAPQVEMTTGATIHTTNG 554
+L FG GP +C+G A E + L R+ + ++A+ V + I+ +
Sbjct: 344 -RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPMEDVPFKGDSVIYGVHE 402
Query: 555 LRMT 558
L +T
Sbjct: 403 LPVT 406
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 410 TIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL----GKYPIKRGEDIFISVWNL 465
T+G ++K++ T V+ E LR P R+ +D V+ + +K GE ++
Sbjct: 337 TMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLA 396
Query: 466 HRSPHIWDDADKFNPERW 483
R P I+D AD+F PER+
Sbjct: 397 TRDPKIFDRADEFVPERF 414
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 410 TIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL----GKYPIKRGEDIFISVWNL 465
T+G ++K++ T V+ E LR P R+ +D V+ + +K GE ++
Sbjct: 337 TMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLA 396
Query: 466 HRSPHIWDDADKFNPERW 483
R P I+D AD+F PER+
Sbjct: 397 TRDPKIFDRADEFVPERF 414
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 78/196 (39%), Gaps = 26/196 (13%)
Query: 341 LQFHEEYMNEQDPSILHFLLASGDD----VSSKQLRDDLMTMLIAGHETSAAVL-TWTFY 395
L E E +L L+ DD +S+ +L + +L+AG ETS +++ T+
Sbjct: 197 LDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFETSVSLIGIGTYL 256
Query: 396 LLSKVDSI-LGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKR 454
LL+ D + L R P+ + E LR P R + E+ +G I +
Sbjct: 257 LLTHPDQLALVRRDPSA--------LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQ 308
Query: 455 GEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMF 514
+ ++ +R P + D +F + T +L FG G C+G
Sbjct: 309 YSTVLVANGAANRDPKQFPDPHRF------------DVTRDTRGHLSFGQGIHFCMGRPL 356
Query: 515 ATFENIVAVAMLVRQF 530
A E VA+ L +F
Sbjct: 357 AKLEGEVALRALFGRF 372
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 25/175 (14%)
Query: 373 DDLMTMLIAGHET------SAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTARVINE 426
DDL++ +A E + A+ + ++ + + G R + ++ Y + E
Sbjct: 224 DDLLSPHVAAVELVNVLRPTVAIAVYITFVAHALQTCSGIRAALV---QQPDYAELFVQE 280
Query: 427 SLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER---W 483
R YP P ++ R+ +D G + + ++ + W D +F PER W
Sbjct: 281 VRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAW 340
Query: 484 PLDGPNPNETNQDYCYLPFGGGP----RKCVGDMFATFENIVAVAMLVRQFNFQM 534
D N ++P GGG +C G+ VA +LV + +
Sbjct: 341 DEDSFN---------FIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDV 386
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 25/175 (14%)
Query: 373 DDLMTMLIAG------HETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTARVINE 426
DDL++ +A E + A+ + ++ + + G R + ++ Y + E
Sbjct: 216 DDLLSPHVAAVELVNVLEPTVAIAVYITFVAHALQTCSGIRAALV---QQPDYAELFVQE 272
Query: 427 SLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER---W 483
R YP P ++ R+ +D G + + ++ + W D +F PER W
Sbjct: 273 VRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAW 332
Query: 484 PLDGPNPNETNQDYCYLPFGGGP----RKCVGDMFATFENIVAVAMLVRQFNFQM 534
D N ++P GGG +C G+ VA +LV + +
Sbjct: 333 DEDSFN---------FIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDV 378
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 25/175 (14%)
Query: 373 DDLMTMLIAGHET------SAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTARVINE 426
DDL++ +A E + A+ + ++ + + G R + ++ Y + E
Sbjct: 224 DDLLSPHVAAVELVNVLRPTVAIAVYITFVAHALQTCSGIRAALV---QQPDYAELFVQE 280
Query: 427 SLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER---W 483
R YP P ++ R+ +D G + + ++ + W D +F PER W
Sbjct: 281 VRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAW 340
Query: 484 PLDGPNPNETNQDYCYLPFGGGP----RKCVGDMFATFENIVAVAMLVRQFNFQM 534
D N ++P GGG +C G+ VA +LV + +
Sbjct: 341 DEDSFN---------FIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDV 386
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 25/175 (14%)
Query: 373 DDLMTMLIAGHET------SAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTARVINE 426
DDL++ +A E + A+ + ++ + + G R + ++ Y + E
Sbjct: 216 DDLLSPHVAAVELVNVLRPTVAIAVYITFVAHALQTCSGIRAALV---QQPDYAELFVQE 272
Query: 427 SLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER---W 483
R YP P ++ R+ +D G + + ++ + W D +F PER W
Sbjct: 273 VRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAW 332
Query: 484 PLDGPNPNETNQDYCYLPFGGGP----RKCVGDMFATFENIVAVAMLVRQFNFQM 534
D N ++P GGG +C G+ VA +LV + +
Sbjct: 333 DEDSFN---------FIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDV 378
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 25/175 (14%)
Query: 373 DDLMTMLIAGHET------SAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTARVINE 426
DDL++ +A E + A+ + ++ + + G R + ++ Y + E
Sbjct: 224 DDLLSPHVAAVELVNVLRPTVAIAVYITFVAHALQTCSGIRAALV---QQPDYAELFVQE 280
Query: 427 SLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER---W 483
R YP P ++ R+ +D G + + ++ + W D +F PER W
Sbjct: 281 VRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAW 340
Query: 484 PLDGPNPNETNQDYCYLPFGGGP----RKCVGDMFATFENIVAVAMLVRQFNFQM 534
D N ++P GGG +C G+ VA +LV + +
Sbjct: 341 DEDSFN---------FIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDV 386
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 437 LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQD 496
L R +LED + I GE +++S +R P ++ D D+ + +R PNP
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR----DPNP------ 345
Query: 497 YCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQF-NFQMALGAPQV 541
+L +G G C G + A + + V L+ + ++A+ A QV
Sbjct: 346 --HLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQV 389
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 437 LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQD 496
L R +LED + I GE +++S +R P ++ D D+ + +R PNP
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR----DPNP------ 345
Query: 497 YCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQF-NFQMALGAPQV 541
+L +G G C G + A + + V L+ + ++A+ A QV
Sbjct: 346 --HLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQV 389
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 77/195 (39%), Gaps = 24/195 (12%)
Query: 341 LQFHEEYMNEQDPSILHFLLASGDD----VSSKQLRDDLMTMLIAGHETSAAVL-TWTFY 395
L E E +L L++ DD +S+ +L + +L+AG E S +++ T+
Sbjct: 196 LDLVERRRTEPGDDLLSALISVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYL 255
Query: 396 LLSKVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRG 455
LL+ D + R D L + E LR P R + E+ +G I +
Sbjct: 256 LLTHPDQLALVR----ADPSALP---NAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQY 308
Query: 456 EDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFA 515
+ ++ +R P + D +F+ T +L FG G C+G A
Sbjct: 309 STVLVANGAANRDPSQFPDPHRFD------------VTRDTRGHLSFGQGIHFCMGRPLA 356
Query: 516 TFENIVAVAMLVRQF 530
E VA+ L +F
Sbjct: 357 KLEGEVALRALFGRF 371
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 26/196 (13%)
Query: 341 LQFHEEYMNEQDPSILHFLLASGDD----VSSKQLRDDLMTMLIAGHETSAAVL-TWTFY 395
L E E +L L+ DD +S+ +L + +L+AG E+S +++ T+
Sbjct: 197 LDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYL 256
Query: 396 LLSKVDSI-LGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKR 454
LL+ D + L R P+ + E LR P R + E+ +G I +
Sbjct: 257 LLTHPDQLALVRRDPSA--------LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQ 308
Query: 455 GEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMF 514
+ ++ +R P + D +F+ T +L FG G C+G
Sbjct: 309 YSTVLVANGAANRDPKQFPDPHRFD------------VTRDTRGHLSFGQGIHFCMGRPL 356
Query: 515 ATFENIVAVAMLVRQF 530
A E VA+ L +F
Sbjct: 357 AKLEGEVALRALFGRF 372
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 26/196 (13%)
Query: 341 LQFHEEYMNEQDPSILHFLLASGDD----VSSKQLRDDLMTMLIAGHETSAAVL-TWTFY 395
L E E +L L+ DD +S+ +L + +L+AG E+S +++ T+
Sbjct: 196 LDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYL 255
Query: 396 LLSKVDSI-LGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKR 454
LL+ D + L R P+ + E LR P R + E+ +G I +
Sbjct: 256 LLTHPDQLALVRRDPSA--------LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQ 307
Query: 455 GEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMF 514
+ ++ +R P + D +F+ T +L FG G C+G
Sbjct: 308 YSTVLVANGAANRDPKQFPDPHRFD------------VTRDTRGHLSFGQGIHFCMGRPL 355
Query: 515 ATFENIVAVAMLVRQF 530
A E VA+ L +F
Sbjct: 356 AKLEGEVALRALFGRF 371
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 77/196 (39%), Gaps = 26/196 (13%)
Query: 341 LQFHEEYMNEQDPSILHFLLASGDD----VSSKQLRDDLMTMLIAGHETSAAVL-TWTFY 395
L E E +L L+ DD +S+ +L + +L+AG E S +++ T+
Sbjct: 196 LDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYL 255
Query: 396 LLSKVDSI-LGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKR 454
LL+ D + L R P+ + E LR P R + E+ +G I +
Sbjct: 256 LLTHPDQLALVRRDPSA--------LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQ 307
Query: 455 GEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMF 514
+ ++ +R P + D +F+ T +L FG G C+G
Sbjct: 308 YSTVLVANGAANRDPKQFPDPHRFD------------VTRDTRGHLSFGQGIHFCMGRPL 355
Query: 515 ATFENIVAVAMLVRQF 530
A E VA+ L +F
Sbjct: 356 AKLEGEVALRALFGRF 371
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 77/196 (39%), Gaps = 26/196 (13%)
Query: 341 LQFHEEYMNEQDPSILHFLLASGDD----VSSKQLRDDLMTMLIAGHETSAAVL-TWTFY 395
L E E +L L+ DD +S+ +L + +L+AG E S +++ T+
Sbjct: 197 LDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYL 256
Query: 396 LLSKVDSI-LGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKR 454
LL+ D + L R P+ + E LR P R + E+ +G I +
Sbjct: 257 LLTHPDQLALVRRDPSA--------LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQ 308
Query: 455 GEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMF 514
+ ++ +R P + D +F+ T +L FG G C+G
Sbjct: 309 YSTVLVANGAANRDPKQFPDPHRFD------------VTRDTRGHLSFGQGIHFCMGRPL 356
Query: 515 ATFENIVAVAMLVRQF 530
A E VA+ L +F
Sbjct: 357 AKLEGEVALRALFGRF 372
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Query: 365 DVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTARVI 424
+++ ++ +++ +++ G++T+ +T L K D+F + L T ++
Sbjct: 249 NMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNP----DQFAKLKANPALVET--MV 302
Query: 425 NESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWP 484
E +R + R ++ D LG I++G+ + + ++ +R + D PE +
Sbjct: 303 PEIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVID-----RPEEFI 357
Query: 485 LDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALGAPQ 540
+D P P + +L FG G +CVG+ A + + ++ +F+ + P+
Sbjct: 358 IDRPRPRQ------HLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAEPE 407
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 16/128 (12%)
Query: 414 MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWD 473
+++ Y + E R YP P ++ R+ +D G + + ++ + W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 474 DADKFNPER---WPLDGPNPNETNQDYCYLPFGGGP----RKCVGDMFATFENIVAVAML 526
D +F PER W D N ++P GGG +C G+ VA +L
Sbjct: 320 DPQEFRPERFRAWDEDSFN---------FIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLL 370
Query: 527 VRQFNFQM 534
V + +
Sbjct: 371 VNAMRYDV 378
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 24/169 (14%)
Query: 405 GDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL----GKYPIKRGEDIFI 460
GD T+ ++++ T V+ ESLR+ P P ++ + + + +K+GE +F
Sbjct: 315 GDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFG 374
Query: 461 SVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGP---------RKCVG 511
+ P ++D +++ P+R+ DG E Y + + GP ++C G
Sbjct: 375 YQPFATKDPKVFDRPEEYVPDRFVGDG----EALLKYVW--WSNGPETESPTVENKQCAG 428
Query: 512 DMFATFENIVAVAMLVRQFN-FQMALGAPQVEMTTGATIHTTNGLRMTV 559
F + V L R+++ F++ LG E GA + T R ++
Sbjct: 429 KDFVVLITRLFVIELFRRYDSFEIELG----ESPLGAAVTLTFLKRASI 473
>pdb|4DXY|A Chain A, Crystal Structures Of Cyp101d2 Y96a Mutant
Length = 417
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 15/85 (17%)
Query: 452 IKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVG 511
+KRG+ I + + H DDA NPE W LD + + + FGGGP +C G
Sbjct: 319 LKRGDMILLPT-----ALHGLDDAA--NPEPWKLDF-----SRRSISHSTFGGGPHRCAG 366
Query: 512 DMFATFENIVAVAMLVR---QFNFQ 533
A E IV + ++ +F+F+
Sbjct: 367 MHLARMEVIVTLEEWLKRIPEFSFK 391
>pdb|3NV5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d2
pdb|3NV6|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d2
Length = 452
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 15/85 (17%)
Query: 452 IKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVG 511
+KRG+ I + + H DDA NPE W LD + + + FGGGP +C G
Sbjct: 354 LKRGDMILLPT-----ALHGLDDAA--NPEPWKLDF-----SRRSISHSTFGGGPHRCAG 401
Query: 512 DMFATFENIVAVAMLVR---QFNFQ 533
A E IV + ++ +F+F+
Sbjct: 402 MHLARMEVIVTLEEWLKRIPEFSFK 426
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 20/170 (11%)
Query: 363 GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTAR 422
G+ +SS+++ + +++AG+ET+ +T LS+ DR+ D L TA
Sbjct: 256 GERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPE-QRDRW--WSDFDGLAPTA- 311
Query: 423 VINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPE 481
+ E +R + P V +RR+L D+ L + G+ + + + +R + D F+
Sbjct: 312 -VEEIVR-WASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLA 369
Query: 482 RWPLDGPNPNETNQDYCYLPF-GGGPRKCVGDMFATFENIVAVAMLVRQF 530
R PNP +L F GGG C+G A E VA L RQ
Sbjct: 370 R----NPNP--------HLGFGGGGAHFCLGANLARREIRVAFDELRRQM 407
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 365 DVSSKQLRDD-----LMTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKY 419
D+ ++L DD ++ + +AG+ET+ +T ++ P ++ K +
Sbjct: 230 DIDGEKLSDDEFGFFVVMLAVAGNETTRNSITHGMIAFAQ--------NPDQWELYKKER 281
Query: 420 TARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFN 479
+E +R R +LED LG IK+G+ + +S + + +++D FN
Sbjct: 282 PETAADEIVRWATPVSAFQRTALEDVELGGVQIKKGQRVVMSYRSANFDEEVFEDPHTFN 341
Query: 480 PERWPLDGPNPNETNQDYCYLPFGG-GPRKCVGDMFA 515
L PNP ++ FGG G C+G A
Sbjct: 342 ----ILRSPNP--------HVGFGGTGAHYCIGANLA 366
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 95/232 (40%), Gaps = 51/232 (21%)
Query: 306 DISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLA---- 361
D SP K NAA+ ++ L DL+ E E D ++L LLA
Sbjct: 173 DDSPADDK-NAAMGKLHGYLSDLL---------------ERKRTEPDDALLSSLLAVSDE 216
Query: 362 SGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKL---- 417
GD +S ++L M +LIAGHET+ ++ + V ++L T D +KL
Sbjct: 217 DGDRLSQEELVAMAMLLLIAGHETTVNLIG------NGVLALL-----THPDQRKLLAED 265
Query: 418 -KYTARVINESLRL-YPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDA 475
+ + E LR P IR + ED I GE + + + +R DA
Sbjct: 266 PSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANR------DA 319
Query: 476 DKFNPERWPLDGPNPNETNQDYC-YLPFGGGPRKCVGDMFATFENIVAVAML 526
D + PE P+ + +D + FG G C+G A E VA+ L
Sbjct: 320 D-WMPE------PDRLDITRDASGGVFFGHGIHFCLGAQLARLEGRVAIGRL 364
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 91/223 (40%), Gaps = 50/223 (22%)
Query: 315 NAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLA----SGDDVSSKQ 370
NAA+ ++ L DL+ E E D ++L LLA GD +S ++
Sbjct: 181 NAAMGKLHGYLSDLL---------------ERKRTEPDDALLSSLLAVSDMDGDRLSQEE 225
Query: 371 LRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKL-----KYTARVIN 425
L M +LIAGHET+ ++ + V ++L T D +KL + +
Sbjct: 226 LVAMAMLLLIAGHETTVNLIG------NGVLALL-----THPDQRKLLAEDPSLISSAVE 274
Query: 426 ESLRL-YPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWP 484
E LR P IR + ED I GE + + + +R DAD + PE
Sbjct: 275 EFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANR------DAD-WMPE--- 324
Query: 485 LDGPNPNETNQDYC-YLPFGGGPRKCVGDMFATFENIVAVAML 526
P+ + +D + FG G C+G A E VA+ L
Sbjct: 325 ---PDRLDITRDASGGVFFGHGIHFCLGAQLARLEGRVAIGRL 364
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 19/155 (12%)
Query: 377 TMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPV 436
T+LIA H+T+A ++ LL +DS D+ + + L A + E LR
Sbjct: 233 TLLIAAHDTTACMIGLGTALL--LDS--PDQLALLREDPSLVGNA--VEELLRYLTIGQF 286
Query: 437 LIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQ 495
R DV LG I +GE + V P ++ ++F+ R P
Sbjct: 287 GGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP----------- 335
Query: 496 DYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQF 530
+L FG G +C+G A E + L R+
Sbjct: 336 -APHLAFGFGAHQCIGQQLARIELQIVFETLFRRL 369
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 19/155 (12%)
Query: 377 TMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPV 436
T+LIA H+T+A ++ LL +DS D+ + + L A + E LR
Sbjct: 233 TLLIAAHDTTACMIGLGTALL--LDS--PDQLALLREDPSLVGNA--VEELLRYLTIGQF 286
Query: 437 LIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQ 495
R DV LG I +GE + V P ++ ++F+ R P
Sbjct: 287 GGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP----------- 335
Query: 496 DYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQF 530
+L FG G +C+G A E + L R+
Sbjct: 336 -APHLAFGFGAHQCIGQQLARIELQIVFETLFRRL 369
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 19/155 (12%)
Query: 377 TMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPV 436
T+LIA H+T+A ++ LL +DS D+ + + L A + E LR
Sbjct: 233 TLLIAAHDTTACMIGLGTALL--LDS--PDQLALLREDPSLVGNA--VEELLRYLTIGQF 286
Query: 437 LIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQ 495
R DV LG I +GE + V P ++ ++F+ R P
Sbjct: 287 GGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP----------- 335
Query: 496 DYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQF 530
+L FG G +C+G A E + L R+
Sbjct: 336 -APHLAFGFGAHQCIGQQLARIELQIVFETLFRRL 369
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 70/189 (37%), Gaps = 19/189 (10%)
Query: 362 SGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKKLKYTA 421
+G +S + + +L AGHET+ L L +L + T + T
Sbjct: 235 TGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTP------ESTP 288
Query: 422 RVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPE 481
+ E +R P + R + ED LG + I RG + + + +R P + D D +
Sbjct: 289 AAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVH 348
Query: 482 RWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALGAPQV 541
R Q + FG G C+G A E + + L+ + GA +V
Sbjct: 349 R--------AAERQ----VGFGLGIHYCLGATLARAEAEIGLRALLDGIP-ALGRGAHEV 395
Query: 542 EMTTGATIH 550
E H
Sbjct: 396 EYADDMVFH 404
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 21/167 (12%)
Query: 365 DVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSILGDRFPTIGDMKK-LKYTARV 423
+V+++QL L + AG ET+ +++ + LL DR +++K
Sbjct: 233 NVTTEQLLSTLGITINAGRETTTSMIALSTLLLL-------DRPELPAELRKDPDLMPAA 285
Query: 424 INESLR-LYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER 482
++E LR L + +R + ED L + + + + + P +DD ++ + R
Sbjct: 286 VDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHR 345
Query: 483 WPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQ 529
D ++ FG G +CVG A E VA+ L+R+
Sbjct: 346 ------------TDNHHVAFGYGVHQCVGQHLARLELEVALETLLRR 380
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 78/190 (41%), Gaps = 22/190 (11%)
Query: 345 EEYMNEQDPSILHFLL---ASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVD 401
E N + +L LL A G +S+K+L + ++ AG +T+ ++ + L +
Sbjct: 215 ERRRNPLENDVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSP 274
Query: 402 SILGDRFPTIGDMKKLKYTARVINESLRLYPQPPV-LIRRSLEDDVLGKYPIKRGEDIFI 460
L G M+ ++E LR + +R + +D IK+GE +F+
Sbjct: 275 EALELVKAEPGLMRN------ALDEVLRFENILRIGTVRFARQDLEYCGASIKKGEMVFL 328
Query: 461 SVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENI 520
+ + R ++ D F+ R +T+ Y G GP C G A E
Sbjct: 329 LIPSALRDGTVFSRPDVFDVRR---------DTSASLAY---GRGPHVCPGVSLARLEAE 376
Query: 521 VAVAMLVRQF 530
+AV + R+F
Sbjct: 377 IAVGTIFRRF 386
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 76/189 (40%), Gaps = 20/189 (10%)
Query: 345 EEYMNEQDPSILHFLL---ASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVD 401
E N + +L LL A G +S+K+L + ++ AG +T+ ++ + L +
Sbjct: 215 ERRRNPLENDVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSP 274
Query: 402 SILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFIS 461
L G M+ + LR+ +R + +D IK+GE +F+
Sbjct: 275 EALELVKAEPGLMRNALDEVLRFDNILRIG-----TVRFARQDLEYCGASIKKGEMVFLL 329
Query: 462 VWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIV 521
+ + R ++ D F+ R +T+ Y G GP C G A E +
Sbjct: 330 IPSALRDGTVFSRPDVFDVRR---------DTSASLAY---GRGPHVCPGVSLARLEAEI 377
Query: 522 AVAMLVRQF 530
AV + R+F
Sbjct: 378 AVGTIFRRF 386
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 74/192 (38%), Gaps = 28/192 (14%)
Query: 352 DPSILHFLLAS----GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK---VDSIL 404
D +I H + A GD + + TM+ AG++T +L + LL + +L
Sbjct: 216 DDAISHLVAAGVGADGDTAGTLSILAFTFTMVTAGNDTVTGMLGGSMPLLHRRPDQRRLL 275
Query: 405 GDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWN 464
D I D + E LRL L R + D +G I G + + +
Sbjct: 276 LDDPEGIPD---------AVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGS 326
Query: 465 LHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVA 524
+R D ++ P+ LD T L F G C+G A + VA+
Sbjct: 327 ANR------DERQYGPDAAELD-----VTRCPRNILTFSHGAHHCLGAAAARMQCRVALT 375
Query: 525 -MLVRQFNFQMA 535
+L R +F++A
Sbjct: 376 ELLARCPDFEVA 387
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,304,014
Number of Sequences: 62578
Number of extensions: 798832
Number of successful extensions: 2310
Number of sequences better than 100.0: 180
Number of HSP's better than 100.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 1876
Number of HSP's gapped (non-prelim): 194
length of query: 601
length of database: 14,973,337
effective HSP length: 104
effective length of query: 497
effective length of database: 8,465,225
effective search space: 4207216825
effective search space used: 4207216825
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)